Pregenerated sensors for RIMBP3B (Homo sapiens)
Ensembl gene IDs: ENSG00000274600Ensembl transcript IDs: ENST00000620804.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGAAGACCGATCGTCCTCTATCGGGGATGGTCATCCTCTTCCATTaGGCACACAGCTTCTGGAGGGACGCACATGGAGTGGTGAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: LKTDRPLSGMVILFH*AHSFWRDAHGVVRE Trigger: CTCCCTCACCACTCCATGTGCGTCCCTCCAGAAGCTGTGTGCTCAATGGAAGAGGATGACCATCCCCGATAGAGGACGATCGGTCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| 3UTR TCA 90 bp | TCGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTACTCTTATACTCTTaGCTGAAGACCGATCGTCCTCTATCGGGGATGGTCATCCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: SFGGSSRGAQLLLYS*LKTDRPLSGMVILF Trigger: GAAGAGGATGACCATCCCCGATAGAGGACGATCGGTCTTCAGTCAAGAGTATAAGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| 3UTR TCA 90 bp | TTGGAGGTTCTAGCAGGGGAGCGCAGCTACTCTTATACTCTTGACTaGAGACCGATCGTCCTCTATCGGGGATGGTCATCCTCTTCCATT | + |
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Preference number: 1 (lower is better) Translates to: LEVLAGERSYSYTLD*RPIVLYRGWSSSSI Trigger: AATGGAAGAGGATGACCATCCCCGATAGAGGACGATCGGTCTTCAGTCAAGAGTATAAGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| 3UTR TCA 72 bp | CTAGCAGGGGAGCGCAGCTACTCTTATACTCTTGACTaGAGACCGATCGTCCTCTATCGGGGATGGTCATCC | + |
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Preference number: 3 (lower is better) Translates to: LAGERSYSYTLD*RPIVLYRGWSS Trigger: GGATGACCATCCCCGATAGAGGACGATCGGTCTTCAGTCAAGAGTATAAGAGTAGCTGCGCTCCCCTGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| 3UTR TCA 72 bp | GGTTCTAGCAGGGGAGCGCAGCTACTCTTATACTCTTaGCTGAAGACCGATCGTCCTCTATCGGGGATGGTC | + |
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Preference number: 3 (lower is better) Translates to: GSSRGAQLLLYS*LKTDRPLSGMV Trigger: GACCATCCCCGATAGAGGACGATCGGTCTTCAGTCAAGAGTATAAGAGTAGCTGCGCTCCCCTGCTAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| 3UTR-3UTR CAA 90 bp | ATTCTGAGAGCTCGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTACTCTTATACTGGTCATCCTCTTCCATaGAGCACACAGCTTCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: ILRARLEVLAGERSYSYTGHPLP*STQLLE Trigger: CTCCAGAAGCTGTGTGCTCAATGGAAGAGGATGACC...AGTATAAGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACGAGCTCTCAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| CDS-3UTR GCA 90 bp | GAGGAAGGGGATACCCGCCTAGTCAGCCAGATCAGCCGAATCAACCCTGATGATCGTTGCAGCTGCTGCTaGCTGTCCTGCCCGCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: EEGDTRLVSQISRINPDDRCSCC*LSCPRA Trigger: GGCGCGCGGGCAGGACAGGCAGCAGCAGCTGCAACG...ATCATCAGGGTTGATTCGGCTGATCTGGCTGACTAGGCGGGTATCCCCTTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| CDS-3UTR GCA 90 bp | GAGGAAGGGGATACCCGCCTAGTCAGCCAGATCAGCCGAATCAACCCTGATGATTGCTGCAGCTGCCGCTaGTCGGCCTCCTTCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: EEGDTRLVSQISRINPDDCCSCR*SASFQR Trigger: GCGCTGGAAGGAGGCCGAGCAGCGGCAGCTGCAGCA...ATCATCAGGGTTGATTCGGCTGATCTGGCTGACTAGGCGGGTATCCCCTTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| CDS-3UTR GCA 90 bp | GAGGAAGGGGATACCCGCCTAGTCAGCCAGATCAGCCGAATCAACCCTGATGATTCCCGGTGCAGCAGCTaGTGCAGCTGCCGCTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: EEGDTRLVSQISRINPDDSRCSS*CSCRCS Trigger: CGAGCAGCGGCAGCTGCAGCAGCTGCTGCACCGGGA...ATCATCAGGGTTGATTCGGCTGATCTGGCTGACTAGGCGGGTATCCCCTTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| CDS-3UTR GCA 90 bp | GAGGAAGGGGATACCCGCCTAGTCAGCCAGATCAGCCGAATCAACCCTGATGATCCATCGCGCTCCCGGTaGAGCAGCTGCTGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: EEGDTRLVSQISRINPDDPSRSR*SSCCSC Trigger: GCAGCTGCAGCAGCTGCTGCACCGGGAGCGCGATGG...ATCATCAGGGTTGATTCGGCTGATCTGGCTGACTAGGCGGGTATCCCCTTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| CDS-3UTR GCA 90 bp | ATTCTGAGAGCTCGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTACTCTTATACTCGGTGCAGCAGCTGCTaGAGCTGCCGCTGCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: ILRARLEVLAGERSYSYTRCSSC*SCRCSA Trigger: GGCCGAGCAGCGGCAGCTGCAGCAGCTGCTGCACCG...AGTATAAGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACGAGCTCTCAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| CDS-3UTR GCA 90 bp | ATTCTGAGAGCTCGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTACTCTTATACTCCGCGCGCCGCCTGCTaGAGCAGCTGTTCGGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: ILRARLEVLAGERSYSYTPRAAC*SSCSAI Trigger: GATCGCCGAACAGCTGCTGCAGCAGGCGGCGCGCGG...AGTATAAGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACGAGCTCTCAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| CDS-3UTR GCA 90 bp | GAGGAAGGGGATACCCGCCTAGTCAGCCAGATCAGCCGAATCAACCCTGATGATTTCTGCGGGTCGCGTTaGAGCTGCTGCTGCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: EEGDTRLVSQISRINPDDFCGSR*SCCCLS Trigger: GGACAGGCAGCAGCAGCTGCAACGCGACCCGCAGAA...ATCATCAGGGTTGATTCGGCTGATCTGGCTGACTAGGCGGGTATCCCCTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| CDS-3UTR GCA 90 bp | ATTCTGAGAGCTCGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTACTCTTATACTAGCAGCTGCTGCAGCTaGCGCTGCTCGGCCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: ILRARLEVLAGERSYSYTSSCCS*RCSASF Trigger: GAAGGAGGCCGAGCAGCGGCAGCTGCAGCAGCTGCT...AGTATAAGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACGAGCTCTCAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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| CDS-3UTR CAA 90 bp | GAGGAAGGGGATACCCGCCTAGTCAGCCAGATCAGCCGAATCAACCCTGATGATCTTCTGCGGGTCGCGTaGCAGCTGCTGCTGCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: EEGDTRLVSQISRINPDDLLRVA*QLLLPV Trigger: GACAGGCAGCAGCAGCTGCAACGCGACCCGCAGAAG...ATCATCAGGGTTGATTCGGCTGATCTGGCTGACTAGGCGGGTATCCCCTTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620804.1 |
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