RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIMBP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000060709

Ensembl transcript IDs: ENST00000261655.8, ENST00000535703.6, ENST00000536632.1, ENST00000540658.1, ENST00000541840.2, ENST00000544568.2, ENST00000643940.1, ENST00000644209.1, ENST00000647475.1

Found 1081 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGCCTCCCGGGCCATGGCCTTGGCGACGGTGGTGGACACCGGGGTaGCCTGTGGCTGTGGCAGGATGCGGCTGGGTGAGGGCGACCGCC +
Preference number: 1 (lower is better)
Translates to: RPPGPWPWRRWWTPG*PVAVAGCGWVRATA
Trigger: GGCGGTCGCCCTCACCCAGCCGCATCCTGCCACAGCCACAGGGCACCCCGGTGTCCACCACCGTCGCCAAGGCCATGGCCCGGGAGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 90 bp CCACGGACTCGCCCTGGGCGGAGAGGGTCCGCACGGTCACGCCCTTaGCCTCCAGGCTCCGCAGCCGCACAAGCTCCACGGCCGTGCTGT +
Preference number: 1 (lower is better)
Translates to: PRTRPGRRGSARSRP*PPGSAAAQAPRPCC
Trigger: ACAGCACGGCCGTGGAGCTTGTGCGGCTGCGGAGCCTGGAGGCCAAGGGCGTGACCGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR GCA 90 bp TGGGAGGGGGCCACCACCACGTCCTTGCCCACCAGCAGCGTGCACTaGAGCTCATCCGAGCTGCCCCTGCTGGTGACGCACTGCACGGAG +
Preference number: 1 (lower is better)
Translates to: WEGATTTSLPTSSVH*SSSELPLLVTHCTE
Trigger: CTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGCCCCCTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CCA 90 bp GGTAACGTTTGCGCCATTGGACAGCCCGGTGGGCGTCAGCACAGGTaGTCTCCAGGAGACCCGGATGGTGGCGGGGGTCACCCCAGCCTG +
Preference number: 1 (lower is better)
Translates to: GNVCAIGQPGGRQHR*SPGDPDGGGGHPSL
Trigger: CAGGCTGGGGTGACCCCCGCCACCATCCGGGTCTCCTGGAGACCACCTGTGCTGACGCCCACCGGGCTGTCCAATGGCGCAAACGTTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 90 bp GCACAGGGCCAGGTGCACGGCTCTGCTCCCAGGCCTCATCCATCCTaGCGTGGGGACCCAGGTGCTCGTCTTTGGTTTCGGGGACTCCAG +
Preference number: 1 (lower is better)
Translates to: AQGQVHGSAPRPHPS*RGDPGARLWFRGLQ
Trigger: CTGGAGTCCCCGAAACCAAAGACGAGCACCTGGGTCCCCACGCCAGGATGGATGAGGCCTGGGAGCAGAGCCGTGCACCTGGCCCTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR GCA 90 bp GGGGCCACCGCGCTGCCACCCAGCAGGTCAATCTTGCCAGCGTGCTaGCGGAACTTCTCCAGGTCCCGGGACAGCAGGTTGAACTGCTCA +
Preference number: 1 (lower is better)
Translates to: GATALPPSRSILPAC*RNFSRSRDSRLNCS
Trigger: TGAGCAGTTCAACCTGCTGTCCCGGGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGTGGCAGCGCGGTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CCA 90 bp CAGATCTGCATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTTaGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCGGAAGGGGCC +
Preference number: 1 (lower is better)
Translates to: QICILRYRISTGRWA*RTEAPACHQAAEGA
Trigger: GGCCCCTTCCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCAGATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 90 bp AGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTaGGGAAGGGGCCGGATATATTCACCGATCGCAGAGCTGCCTCCA +
Preference number: 1 (lower is better)
Translates to: RKVGLADRGSGLSPG*GRGRIYSPIAELPP
Trigger: TGGAGGCAGCTCTGCGATCGGTGAATATATCCGGCCCCTTCCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CCA 90 bp GCCAAGCACAGTCTGAACCCTCAGCGACTGGTGACCTGGGTGGTGTaGGGCCTACGGAGGGCAATGGGCCTCTGCCTGAGAATGCTGCGG +
Preference number: 1 (lower is better)
Translates to: AKHSLNPQRLVTWVV*GLRRAMGLCLRMLR
Trigger: CCGCAGCATTCTCAGGCAGAGGCCCATTGCCCTCCGTAGGCCCCACACCACCCAGGTCACCAGTCGCTGAGGGTTCAGACTGTGCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 90 bp CTCCCCTGTGCCAAGCACAGTCTGAACCCTCAGCGACTGGTGACCTaGGTGGTGTGGGGCCTACGGAGGGCAATGGGCCTCTGCCTGAGA +
Preference number: 1 (lower is better)
Translates to: LPCAKHSLNPQRLVT*VVWGLRRAMGLCLR
Trigger: TCTCAGGCAGAGGCCCATTGCCCTCCGTAGGCCCCACACCACCCAGGTCACCAGTCGCTGAGGGTTCAGACTGTGCTTGGCACAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 90 bp GGGCCAGGTGCACGGCTCTGCTCCCAGGCCTCATCCATCCTGGCGTaGGGACCCAGGTGCTCGTCTTTGGTTTCGGGGACTCCAGAACTT +
Preference number: 1 (lower is better)
Translates to: GPGARLCSQASSILA*GPRCSSLVSGTPEL
Trigger: AAGTTCTGGAGTCCCCGAAACCAAAGACGAGCACCTGGGTCCCCACGCCAGGATGGATGAGGCCTGGGAGCAGAGCCGTGCACCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 90 bp TGCAGTTCAGGAAGCAGAGGCAGGTCAGAGCAGGCCCAGGACTCATaGCCGCGTCCACTCACGGGAAAAGCATCGCCAAGCACGCCGGGC +
Preference number: 1 (lower is better)
Translates to: CSSGSRGRSEQAQDS*PRPLTGKASPSTPG
Trigger: GCCCGGCGTGCTTGGCGATGCTTTTCCCGTGAGTGGACGCGGCCATGAGTCCTGGGCCTGCTCTGACCTGCCTCTGCTTCCTGAACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647475.1
3UTR GCA 90 bp AGCCACCCTCTGCCCTTTGGCATACACGCCGTAGCCGGTAACGTTTaGGCCATTGGACAGCCCGGTGGGCGTCAGCACAGGTGGTCTCCA +
Preference number: 1 (lower is better)
Translates to: SHPLPFGIHAVAGNV*AIGQPGGRQHRWSP
Trigger: TGGAGACCACCTGTGCTGACGCCCACCGGGCTGTCCAATGGCGCAAACGTTACCGGCTACGGCGTGTATGCCAAAGGGCAGAGGGTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR GCA 90 bp CTGGTGACCTGGGTGGTGTGGGGCCTACGGAGGGCAATGGGCCTCTaGCTGAGAATGCTGCGGGAGAGGGAAGCCCCTTTCTATTGGACT +
Preference number: 1 (lower is better)
Translates to: LVTWVVWGLRRAMGL*LRMLREREAPFYWT
Trigger: AGTCCAATAGAAAGGGGCTTCCCTCTCCCGCAGCATTCTCAGGCAGAGGCCCATTGCCCTCCGTAGGCCCCACACCACCCAGGTCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR GCA 90 bp TCCTGGGAAGAACCTCTGGACTGGCTGGGGTCTGGACCTCCCCTGTaGCAAGCACAGTCTGAACCCTCAGCGACTGGTGACCTGGGTGGT +
Preference number: 1 (lower is better)
Translates to: SWEEPLDWLGSGPPL*QAQSEPSATGDLGG
Trigger: ACCACCCAGGTCACCAGTCGCTGAGGGTTCAGACTGTGCTTGGCACAGGGGAGGTCCAGACCCCAGCCAGTCCAGAGGTTCTTCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 90 bp CTGACTCAGATCTGCATCTTGCGCTACCGGATCTCGACAGGAAGGTaGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCGGAA +
Preference number: 1 (lower is better)
Translates to: LTQICILRYRISTGR*AWRTEAPACHQAAE
Trigger: TTCCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCAGATCTGAGTCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 90 bp GCCCCTGCTGGTGACGCACTGCACGGAGATGCGGTAGGTGCAGGCTaGCATGTTGAGCTTCTCGATGAGGGCTTTAGTTCTGCTCCCCAG +
Preference number: 1 (lower is better)
Translates to: APAGDALHGDAVGAG*HVELLDEGFSSAPQ
Trigger: CTGGGGAGCAGAACTAAAGCCCTCATCGAGAAGCTCAACATGGCAGCCTGCACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 90 bp GCAGGCAACGTGGAGAACTCCACAAAGGCCTCCTTCTTCTCCCTTTaGTCCAGCGGGAGCTGCCACGGCATCTGGTGGGGTTTGGCCAGA +
Preference number: 1 (lower is better)
Translates to: AGNVENSTKASFFSL*SSGSCHGIWWGLAR
Trigger: TCTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAGGAGGCCTTTGTGGAGTTCTCCACGTTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 90 bp CGGCTCTGCTCCCAGGCCTCATCCATCCTGGCGTGGGGACCCAGGTaGTCGTCTTTGGTTTCGGGGACTCCAGAACTTGCTAATGGCTTT +
Preference number: 1 (lower is better)
Translates to: RLCSQASSILAWGPR*SSLVSGTPELANGF
Trigger: AAAGCCATTAGCAAGTTCTGGAGTCCCCGAAACCAAAGACGAGCACCTGGGTCCCCACGCCAGGATGGATGAGGCCTGGGAGCAGAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR GCA 90 bp AGTCATAGGCGTCCTCCTCGTCTGAGGCGGCGTACTGCCCCGCGCTaGTTCTCTCTAGGAAGACGCTCCTTTTCTCTAACCTGCTGCTCT +
Preference number: 1 (lower is better)
Translates to: SHRRPPRLRRRTAPR*FSLGRRSFSLTCCS
Trigger: AGAGCAGCAGGTTAGAGAAAAGGAGCGTCTTCCTAGAGAGAAGCAGCGCGGGGCAGTACGCCGCCTCAGACGAGGAGGACGCCTATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR TCA 90 bp TGCCAGCGTGCTGCCGGAACTTCTCCAGGTCCCGGGACAGCAGGTTaGACTGCTCACTTTGAGTCCGGCATTTCTCTTCCAGCTCTCGAA +
Preference number: 1 (lower is better)
Translates to: CQRAAGTSPGPGTAG*TAHFESGISLPALE
Trigger: TTCGAGAGCTGGAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAACCTGCTGTCCCGGGACCTGGAGAAGTTCCGGCAGCACGCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 90 bp CGCTGCAGGACGACTTCACCTCGCTTCCCTTTACAGCTAAGCATGTaGCTGAGTTGGCAGTGCAGCAGCATTCCTCTGGCCCTACCTCTC +
Preference number: 1 (lower is better)
Translates to: RCRTTSPRFPLQLSM*LSWQCSSIPLALPL
Trigger: GAGAGGTAGGGCCAGAGGAATGCTGCTGCACTGCCAACTCAGGCACATGCTTAGCTGTAAAGGGAAGCGAGGTGAAGTCGTCCTGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR GCA 90 bp TCACCTCGCTTCCCTTTACAGCTAAGCATGTGCCTGAGTTGGCAGTaGAGCAGCATTCCTCTGGCCCTACCTCTCCAGAGCAACTCTTGC +
Preference number: 1 (lower is better)
Translates to: SPRFPLQLSMCLSWQ*SSIPLALPLQSNSC
Trigger: GCAAGAGTTGCTCTGGAGAGGTAGGGCCAGAGGAATGCTGCTGCACTGCCAACTCAGGCACATGCTTAGCTGTAAAGGGAAGCGAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR GCA 90 bp GCCTCGGTTCAATCTAATTCCAGCTCTGTTAGGAGACCATCTGCTTaGCAAGTTCAGAGCCTTTCAGGAAGTCGTCCACCGAGGCGCCCC +
Preference number: 1 (lower is better)
Translates to: ASVQSNSSSVRRPSA*QVQSLSGSRPPRRP
Trigger: GGGGCGCCTCGGTGGACGACTTCCTGAAAGGCTCTGAACTTGGCAAGCAGATGGTCTCCTAACAGAGCTGGAATTAGATTGAACCGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 90 bp ACGACTTCACCTCGCTTCCCTTTACAGCTAAGCATGTGCCTGAGTTaGCAGTGCAGCAGCATTCCTCTGGCCCTACCTCTCCAGAGCAAC +
Preference number: 1 (lower is better)
Translates to: TTSPRFPLQLSMCLS*QCSSIPLALPLQSN
Trigger: GTTGCTCTGGAGAGGTAGGGCCAGAGGAATGCTGCTGCACTGCCAACTCAGGCACATGCTTAGCTGTAAAGGGAAGCGAGGTGAAGTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR CCA 90 bp GGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATaGACTGTGGGGGATGGAGCTCTCCTTGCTGTACCTGAACCCTCA +
Preference number: 1 (lower is better)
Translates to: GLPEPIDDVGDPEWR*TVGDGALLAVPEPS
Trigger: TGAGGGTTCAGGTACAGCAAGGAGAGCTCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
3UTR CCA 90 bp CATGCTTGGCCAAACAGACTTCCTCTGCAGTCTCATCAGAAGGAGTaGGAGGCCCTCGGAAGTGCAGAGCTGTGTTTCTGCCGCTGTGTT +
Preference number: 1 (lower is better)
Translates to: HAWPNRLPLQSHQKE*EALGSAELCFCRCV
Trigger: AACACAGCGGCAGAAACACAGCTCTGCACTTCCGAGGGCCTCCCACTCCTTCTGATGAGACTGCAGAGGAAGTCTGTTTGGCCAAGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR GCA 90 bp GGAATGGTTGATGAAGTTCTGATCCTGCTCGTTCCCCAGCGTGCTTaGCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAGTTGGA +
Preference number: 1 (lower is better)
Translates to: GMVDEVLILLVPQRA*QPRLVVLHKVHEVG
Trigger: TCCAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACGAGCAGGATCAGAACTTCATCAACCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CCA 90 bp TCTCTAGAAAAGTCATCTCTTGTAGCAGGTGTGGTCATCCAGAGCTaGGCGTCAGCACTGGTGGCCACCAGCCACGTGTGGCTGTTTACA +
Preference number: 1 (lower is better)
Translates to: SLEKSSLVAGVVIQS*ASALVATSHVWLFT
Trigger: TGTAAACAGCCACACGTGGCTGGTGGCCACCAGTGCTGACGCCCAGCTCTGGATGACCACACCTGCTACAAGAGATGACTTTTCTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR TCA 90 bp TTAATAAGACGTCCCCTCCCACCTCCCAAATCAGAGCTTGGACAATaGGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTTT +
Preference number: 1 (lower is better)
Translates to: LIRRPLPPPKSELGQ*EQTASGDREQPLLF
Trigger: AAAGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTGGGAGGGGACGTCTTATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR GCA 90 bp GCAGGAAAACGTGTTAATAGCATGCTTGGCCAAACAGACTTCCTCTaGAGTCTCATCAGAAGGAGTGGGAGGCCCTCGGAAGTGCAGAGC +
Preference number: 1 (lower is better)
Translates to: AGKRVNSMLGQTDFL*SLIRRSGRPSEVQS
Trigger: GCTCTGCACTTCCGAGGGCCTCCCACTCCTTCTGATGAGACTGCAGAGGAAGTCTGTTTGGCCAAGCATGCTATTAACACGTTTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 90 bp TGTGGCTGCCATAAGACAGCGCTGAATGCCGATCTCAAAAACCAGTaGGGGTATGGGTCCTTCACCCAGAGAACAAGTGCTCCAGCCTTT +
Preference number: 1 (lower is better)
Translates to: CGCHKTALNADLKNQ*GYGSFTQRTSAPAF
Trigger: AAAGGCTGGAGCACTTGTTCTCTGGGTGAAGGACCCATACCCCCACTGGTTTTTGAGATCGGCATTCAGCGCTGTCTTATGGCAGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR TCA 90 bp ACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTaGCAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAA +
Preference number: 1 (lower is better)
Translates to: TSQIRAWTMRADCQR*QRATAPLCSRGWFK
Trigger: TTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR CCA 90 bp CTCTCTCGTAAGGTAGAGGCAGGGTTACTTAAGGAAAACACGTTCTaGCCACTCGAGCCAGTGTTTGGAGTGTTCAGAGCCAACACTCGA +
Preference number: 1 (lower is better)
Translates to: LSRKVEAGLLKENTF*PLEPVFGVFRANTR
Trigger: TCGAGTGTTGGCTCTGAACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAAGTAACCCTGCCTCTACCTTACGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR CCA 90 bp TATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCTCTGCTTaGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGACTCAGATC +
Preference number: 1 (lower is better)
Translates to: YSGQHRGGPSPSISA*RYWNSVHSPCLTQI
Trigger: GATCTGAGTCAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTaGTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAG +
Preference number: 1 (lower is better)
Translates to: DREQPLLFVLVVGLK*LVVQKCISLLVSGE
Trigger: CTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR GCA 90 bp GAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTaGCATTCATTGCTGTGTATTTGGGTATGGCATTTTGACAACGAA +
Preference number: 1 (lower is better)
Translates to: ESGFGVAYALCGLLV*HSLLCIWVWHFDNE
Trigger: TTCGTTGTCAAAATGCCATACCCAAATACACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR TCA 90 bp CCTGTACAACTTGATCTCAAACCACTGTGTCAGGATGAAGACCACTaGATGCACGACACATACAAAGTATACACTGTTTTTATTAGACAG +
Preference number: 1 (lower is better)
Translates to: PVQLDLKPLCQDEDH*MHDTYKVYTVFIRQ
Trigger: CTGTCTAATAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGACACAGTGGTTTGAGATCAAGTTGTACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR TCA 90 bp CCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTaGGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGT +
Preference number: 1 (lower is better)
Translates to: PMMKMGMDSFGADLN*VWFWCGLCIMWITC
Trigger: ACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR GCA 90 bp TTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTaGTGTGTATTTGGGTATGGCATTTTGACAACGAAAGTAACAGAA +
Preference number: 1 (lower is better)
Translates to: LVWLMHYVDYLCAIH*CVFGYGILTTKVTE
Trigger: TTCTGTTACTTTCGTTGTCAAAATGCCATACCCAAATACACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR TCA 90 bp AAAGTACACCTGAAGATACCATCTATTCCATCTAATGTGATCATTTaGGCTGCGTGCTTCATCAACTTAGTATTGCATTGGTATACCAAC +
Preference number: 1 (lower is better)
Translates to: KVHLKIPSIPSNVII*AACFINLVLHWYTN
Trigger: GTTGGTATACCAATGCAATACTAAGTTGATGAAGCACGCAGCTCAAATGATCACATTAGATGGAATAGATGGTATCTTCAGGTGTACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR GCA 90 bp GTTTCTAAAGTAAAGCTTCCTATAGTAAACATGTTTGTTAGGTTGTaGTTTTTCCAAGAGTGGCTAACAATGCAATATGCAGCTCTCTCT +
Preference number: 1 (lower is better)
Translates to: VSKVKLPIVNMFVRL*FFQEWLTMQYAALS
Trigger: AGAGAGAGCTGCATATTGCATTGTTAGCCACTCTTGGAAAAAGCACAACCTAACAAACATGTTTACTATAGGAAGCTTTACTTTAGAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR GCA 90 bp GTGGCTGTGGCAGGATGCGGCTGGGTGAGGGCGACCGCCTTCCGGGGCCCACGGGCTCGTTCCCCAGCGTaGTTGCCAACCGCGACTCGT +
Preference number: 2 (lower is better)
Translates to: VAVAGCGWVRATAFRGPRARSPA*LPTATR
Trigger: ACGAGTCGCGGTTGGCAAGCACGCTGGGGAACGAGC...CCGTGGGCCCCGGAAGGCGGTCGCCCTCACCCAGCCGCATCCTGCCACAGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR GCA 90 bp GTGGCTGTGGCAGGATGCGGCTGGGTGAGGGCGACCGCCTTCCGGGGCCCACGGACCAGCAGCGTGCACTaGAGCTCATCCGAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: VAVAGCGWVRATAFRGPRTSSVH*SSSELP
Trigger: GGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGT...CCGTGGGCCCCGGAAGGCGGTCGCCCTCACCCAGCCGCATCCTGCCACAGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR GCA 90 bp CACGGACTCGCCCTGGGCGGAGAGGGTCCGCACGGTCACGCCCTTGGCCTCCAGCGCTCTCCTGACCTTTaGCGAGGGAGGTGGCTAGGC +
Preference number: 2 (lower is better)
Translates to: HGLALGGEGPHGHALGLQRSPDL*RGRWLG
Trigger: GCCTAGCCACCTCCCTCGGCAAAGGTCAGGAGAGCG...CTGGAGGCCAAGGGCGTGACCGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR TCA 90 bp CACGGACTCGCCCTGGGCGGAGAGGGTCCGCACGGTCACGCCCTTGGCCTCCAGCCAATAGCGCTCTCCTaGCCTTTGCCGAGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: HGLALGGEGPHGHALGLQPIALS*PLPREV
Trigger: CACCTCCCTCGGCAAAGGTCAGGAGAGCGCTATTGG...CTGGAGGCCAAGGGCGTGACCGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR GCA 90 bp CACGGACTCGCCCTGGGCGGAGAGGGTCCGCACGGTCACGCCCTTGGCCTCCAGGTTCCCCAGCGTGCTTaGCAACCGCGACTCGTTGTC +
Preference number: 2 (lower is better)
Translates to: HGLALGGEGPHGHALGLQVPQRA*QPRLVV
Trigger: GACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAAC...CTGGAGGCCAAGGGCGTGACCGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp CCAGCATGTGCCCATGCACAGGGCCAGGTGCACGGCTCTGCTCCCAGGCCTCATTCCACGGACTCGCCCTaGGCGGAGAGGGTCCGCACG +
Preference number: 2 (lower is better)
Translates to: PACAHAQGQVHGSAPRPHSTDSP*AERVRT
Trigger: CGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTGGA...ATGAGGCCTGGGAGCAGAGCCGTGCACCTGGCCCTGTGCATGGGCACATGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR TCA 90 bp GCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGGGCCACCACCACGTGGCTTGGGAGGAGGTaGGGCTGCAGCCACTTTGCC +
Preference number: 2 (lower is better)
Translates to: AEICVMLSTRRWEGATTTWLGRR*GCSHFA
Trigger: GGCAAAGTGGCTGCAGCCTCACCTCCTCCCAAGCCA...CGTGGTGGTGGCCCCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR TCA 90 bp GTGGCTGTGGCAGGATGCGGCTGGGTGAGGGCGACCGCCTTCCGGGGCCCACGGTGGTTGATGAAGTTCTaGTCCTGCTCGTTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: VAVAGCGWVRATAFRGPRWLMKF*SCSFPS
Trigger: GCTGGGGAACGAGCAGGATCAGAACTTCATCAACCA...CCGTGGGCCCCGGAAGGCGGTCGCCCTCACCCAGCCGCATCCTGCCACAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR GCA 90 bp CCAGCATGTGCCCATGCACAGGGCCAGGTGCACGGCTCTGCTCCCAGGCCTCATTGCTCCAGCGGGAGCTaGCACGGCATCTGGTGGGGT +
Preference number: 2 (lower is better)
Translates to: PACAHAQGQVHGSAPRPHCSSGS*HGIWWG
Trigger: ACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGCA...ATGAGGCCTGGGAGCAGAGCCGTGCACCTGGCCCTGTGCATGGGCACATGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR GCA 90 bp TCCTTGCCCACCAGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGGTGCGCTCTCCTGACCTTTaGCGAGGGAGGTGGCTAGGC +
Preference number: 2 (lower is better)
Translates to: SLPTSSVHCSSSELPLLVRSPDL*RGRWLG
Trigger: GCCTAGCCACCTCCCTCGGCAAAGGTCAGGAGAGCG...CACCAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR GCA 90 bp ACGTCCTTGCCCACCAGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGGCTCGTTCCCCAGCGTaGTTGCCAACCGCGACTCGT +
Preference number: 2 (lower is better)
Translates to: TSLPTSSVHCSSSELPLLARSPA*LPTATR
Trigger: ACGAGTCGCGGTTGGCAAGCACGCTGGGGAACGAGC...CAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CAA 90 bp TCAGATCTGCATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTaGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCGGAAGGGGC +
Preference number: 2 (lower is better)
Translates to: SDLHLALPDLDRKVG*ADRGSGLSPGCGRG
Trigger: GCCCCTTCCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCAGATCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR TCA 90 bp CAGCTCATCCGAGCTGCCCCTGCTGGTGACGCACTGCACGGAGATGCGGTAGGTCAATGGGCCTCTGCCTaGGAATGCTGCGGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: QLIRAAPAGDALHGDAVGQWASA*ECCGRG
Trigger: CCCTCTCCCGCAGCATTCTCAGGCAGAGGCCCATTG...ACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCGGATGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR GCA 90 bp AGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGGTGACGCACTGCACGAGGGCAATGGGCCTCTaGCTGAGAATGCTGCGGGAG +
Preference number: 2 (lower is better)
Translates to: SSVHCSSSELPLLVTHCTRAMGL*LRMLRE
Trigger: CTCCCGCAGCATTCTCAGGCAGAGGCCCATTGCCCT...CGTGCAGTGCGTCACCAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp AGGTGGGAGGGGGCCACCACCACGTCCTTGCCCACCAGCAGCGTGCACTGCAGCTATTGGACTTTGGCTTaGGAGGAGGTGAGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: RWEGATTTSLPTSSVHCSYWTLA*EEVRLQ
Trigger: CTGCAGCCTCACCTCCTCCCAAGCCAAAGTCCAATA...GCTGCAGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGCCCCCTCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp GCGGGAGCTGCCACGGCATCTGGTGGGGTTTGGCCAGAACCTTCACCTTATAGGGGACTGGCTGGGGTCTaGACCTCCCCTGTGCCAAGC +
Preference number: 2 (lower is better)
Translates to: AGAATASGGVWPEPSPYRGLAGV*TSPVPS
Trigger: GCTTGGCACAGGGGAGGTCCAGACCCCAGCCAGTCC...CCTATAAGGTGAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp TCCTTGCCCACCAGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGGTGATCTCGACAGGAAGGTaGGCTTGGCGGACAGAGGCT +
Preference number: 2 (lower is better)
Translates to: SLPTSSVHCSSSELPLLVISTGR*AWRTEA
Trigger: AGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGAT...CACCAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CCA 90 bp CCAGCATGTGCCCATGCACAGGGCCAGGTGCACGGCTCTGCTCCCAGGCCTCATCGGGCAACACAGAGGTaGACCTTCCCCGAGTATCTC +
Preference number: 2 (lower is better)
Translates to: PACAHAQGQVHGSAPRPHRATQR*TFPEYL
Trigger: GAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCG...ATGAGGCCTGGGAGCAGAGCCGTGCACCTGGCCCTGTGCATGGGCACATGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR GCA 90 bp TTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCGGAAGGGGCCGGATATATCCAGCAGGTCAATCTTaGCAGCGTGCTGCCGGAACT +
Preference number: 2 (lower is better)
Translates to: LADRGSGLSPGCGRGRIYPAGQS*QRAAGT
Trigger: AGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGG...ATATATCCGGCCCCTTCCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR GCA 90 bp TCATCCATCCTGGCGTGGGGACCCAGGTGCTCGTCTTTGGTTTCGGGGACTCCAGGGAACGGCAGCAACTaGAGAGTCCACGGACTCGCC +
Preference number: 2 (lower is better)
Translates to: SSILAWGPRCSSLVSGTPGNGSN*RVHGLA
Trigger: GGCGAGTCCGTGGACTCTGCAGTTGCTGCCGTTCCC...TGGAGTCCCCGAAACCAAAGACGAGCACCTGGGTCCCCACGCCAGGATGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp CCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAGTTGGCAGCGACTGGTGACCTaGGTGGTGTGGGGCCTACGG +
Preference number: 2 (lower is better)
Translates to: PACLPTATRCPAQSPRSWQRLVT*VVWGLR
Trigger: CCGTAGGCCCCACACCACCCAGGTCACCAGTCGCTG...CCAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp ACCAGTGGGGGTATGGGTCCTTCACCCAGAGAACAAGTGCTCCAGCCTTTCCTCGTGGCAGGATGCGGCTaGGTGAGGGCGACCGCCTTC +
Preference number: 2 (lower is better)
Translates to: TSGGMGPSPREQVLQPFLVAGCG*VRATAF
Trigger: GAAGGCGGTCGCCCTCACCCAGCCGCATCCTGCCAC...GAGGAAAGGCTGGAGCACTTGTTCTCTGGGTGAAGGACCCATACCCCCACTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp GCTTGGCCAAACAGACTTCCTCTGCAGTCTCATCAGAAGGAGTGGGAGGCCCTCCCTTGGCGACGGTGGTaGACACCGGGGTGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: AWPNRLPLQSHQKEWEALPWRRW*TPGCPV
Trigger: CACAGGGCACCCCGGTGTCCACCACCGTCGCCAAGG...GAGGGCCTCCCACTCCTTCTGATGAGACTGCAGAGGAAGTCTGTTTGGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp CCAGGAGAGCTGGGCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGCCAGCTCTCGAACCTTaGACTGCGTCAGAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: PGELGGDLRDVVHPQVGGPALEP*TASEAA
Trigger: TGCAGCTTCTGACGCAGTCCAAGGTTCGAGAGCTGG...CCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGCCCAGCTCTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647475.1
3UTR CAA 90 bp TGCAGGCAACGTGGAGAACTCCACAAAGGCCTCCTTCTTCTCCCTTaGCTCCAGCGGGAGCTGCCACGGCATCTGGTGGGGTTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: CRQRGELHKGLLLLP*LQRELPRHLVGFGQ
Trigger: CTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAGGAGGCCTTTGTGGAGTTCTCCACGTTGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR TCA 90 bp GGGGGTCCTGCAGGCAACGTGGAGAACTCCACAAAGGCCTCCTTCTTCTCCCTTGCAGCCAAGTCCTGGTaGTGTCGGGGAGGCCTTGGA +
Preference number: 2 (lower is better)
Translates to: GGPAGNVENSTKASFFSLAAKSW*CRGGLG
Trigger: TCCAAGGCCTCCCCGACATCACCAGGACTTGGCTGC...AAGGGAGAAGAAGGAGGCCTTTGTGGAGTTCTCCACGTTGCCTGCAGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR TCA 90 bp CGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCGGTTGAACTGCTCACTTTaGGTCCGGCATTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: RQEGGLGGQRLRPVTRLRLNCSL*VRHFSS
Trigger: GGAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAA...CCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR TCA 90 bp GATGTCGTCGATGTTCACGTCCAGGGTCCCGGCACTGTTGTCGGTGATGCCCGCCCCGGGACAGCAGGTTaGACTGCTCACTTTGAGTCC +
Preference number: 2 (lower is better)
Translates to: DVVDVHVQGPGTVVGDARPGTAG*TAHFES
Trigger: GGACTCAAAGTGAGCAGTTCAACCTGCTGTCCCGGG...GCGGGCATCACCGACAACAGTGCCGGGACCCTGGACGTGAACATCGACGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR TCA 90 bp CCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAGTTGGGGTATTTTCCCGCCGTaGGGGGCAGCTCAGCTTCGG +
Preference number: 2 (lower is better)
Translates to: PACLPTATRCPAQSPRSWGIFPP*GAAQLR
Trigger: CCGAAGCTGAGCTGCCCCTCACGGCGGGAAAATACC...CCAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR GCA 90 bp TTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCGGAAGGGGCCGGATATATCGCACTGCGCCTTCATaGTCCTTCTTAGCCTCAACC +
Preference number: 2 (lower is better)
Translates to: LADRGSGLSPGCGRGRIYRTAPS*SFLAST
Trigger: GGTTGAGGCTAAGAAGGAGCATGAAGGCGCAGTGCG...ATATATCCGGCCCCTTCCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp GGGGGCCACCACCACGTCCTTGCCCACCAGCAGCGTGCACTGCAGCTCATCCGAGAAGCCCCTTTCTATTaGACTTTGGCTTGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: GGHHHVLAHQQRALQLIREAPFY*TLAWEE
Trigger: CTCCTCCCAAGCCAAAGTCCAATAGAAAGGGGCTTC...TCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp CGTTCCCCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGACCTGGGAAGAACCTCTaGACTGGCTGGGGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: RSPACLPTATRCPAQSPRPGKNL*TGWGLD
Trigger: GTCCAGACCCCAGCCAGTCCAGAGGTTCTTCCCAGG...TCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp AGGAGACCATCTGCTTGCCAAGTTCAGAGCCTTTCAGGAAGTCGTCCACCGAGGGGTGCAGGTCTCGGGTaGGGGGTAGGAGGCACCAGG +
Preference number: 2 (lower is better)
Translates to: RRPSACQVQSLSGSRPPRGAGLG*GVGGTR
Trigger: CCTGGTGCCTCCTACCCCCCACCCGAGACCTGCACC...CCTCGGTGGACGACTTCCTGAAAGGCTCTGAACTTGGCAAGCAGATGGTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR GCA 90 bp CCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAGTTGGATCTTGCCAGCGTGCTaGCGGAACTTCTCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: PACLPTATRCPAQSPRSWILPAC*RNFSRS
Trigger: GGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGAT...CCAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR GCA 90 bp CGTTCCCCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGATCAATCTTGCCAGCGTaGTGCCGGAACTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: RSPACLPTATRCPAQSPRSILPA*CRNFSR
Trigger: CCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGA...TCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR GCA 90 bp GTACCTGGCGGCCTTGACGATGTCGAACTCCTCCTCGTTGAGGAAGATGACGTGTGGAGGTCCAGGATGTaGTCTCCCTCCAGGCCGATG +
Preference number: 2 (lower is better)
Translates to: VPGGLDDVELLLVEEDDVWRSRM*SPSRPM
Trigger: CATCGGCCTGGAGGGAGAGCACATCCTGGACCTCCA...CACGTCATCTTCCTCAACGAGGAGGAGTTCGACATCGTCAAGGCCGCCAGGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR GCA 90 bp GCTTGGCCAAACAGACTTCCTCTGCAGTCTCATCAGAAGGAGTGGGAGGCCCTCCGTACTGCCCCGCGCTaGTTCTCTCTAGGAAGACGC +
Preference number: 2 (lower is better)
Translates to: AWPNRLPLQSHQKEWEALRTAPR*FSLGRR
Trigger: GCGTCTTCCTAGAGAGAAGCAGCGCGGGGCAGTACG...GAGGGCCTCCCACTCCTTCTGATGAGACTGCAGAGGAAGTCTGTTTGGCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp TCATCCATCCTGGCGTGGGGACCCAGGTGCTCGTCTTTGGTTTCGGGGACTCCAGCCATTCATGAACTGTaGGAAAGGCTTGCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: SSILAWGPRCSSLVSGTPAIHEL*ERLAGG
Trigger: GCCCCCAGCAAGCCTTTCCCACAGTTCATGAATGGC...TGGAGTCCCCGAAACCAAAGACGAGCACCTGGGTCCCCACGCCAGGATGGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp GAGACCATCTGCTTGCCAAGTTCAGAGCCTTTCAGGAAGTCGTCCACCGAGGCGGGTAGCCAGGAGAGCTaGGCGGAGATCTGCGTGATG +
Preference number: 2 (lower is better)
Translates to: ETICLPSSEPFRKSSTEAGSQES*AEICVM
Trigger: CATCACGCAGATCTCCGCCCAGCTCTCCTGGCTACC...CGCCTCGGTGGACGACTTCCTGAAAGGCTCTGAACTTGGCAAGCAGATGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR GCA 90 bp CCTCTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATCTGTCTCGAGGGAGTaGGGGGTGGCCGTTGCTTTG +
Preference number: 2 (lower is better)
Translates to: PLPGLPEPIDDVGDPEWRSVSRE*GVAVAL
Trigger: CAAAGCAACGGCCACCCCGCACTCCCTCGAGACAGA...TCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR CCA 90 bp GCACGATGTCTTCTCCGATGTCGTCGATGTTCACGTCCAGGGTCCCGGCACTGTATGTCGGGGAGGCCTTaGATTCTACTGGGTCTGAGG +
Preference number: 2 (lower is better)
Translates to: ARCLLRCRRCSRPGSRHCMSGRP*ILLGLR
Trigger: CCTCAGACCCAGTAGAATCCAAGGCCTCCCCGACAT...ACAGTGCCGGGACCCTGGACGTGAACATCGACGACATCGGAGAAGACATCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp GATGTTCACGTCCAGGGTCCCGGCACTGTTGTCGGTGATGCCCGCATCTATGTGGCCATTCATGAACTGTaGGAAAGGCTTGCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: DVHVQGPGTVVGDARIYVAIHEL*ERLAGG
Trigger: GCCCCCAGCAAGCCTTTCCCACAGTTCATGAATGGC...CACATAGATGCGGGCATCACCGACAACAGTGCCGGGACCCTGGACGTGAACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CCA 90 bp GTACCTGGCGGCCTTGACGATGTCGAACTCCTCCTCGTTGAGGAAGATGACGTGATCTCGACAGGAAGGTaGGCTTGGCGGACAGAGGCT +
Preference number: 2 (lower is better)
Translates to: VPGGLDDVELLLVEEDDVISTGR*AWRTEA
Trigger: AGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGAT...CACGTCATCTTCCTCAACGAGGAGGAGTTCGACATCGTCAAGGCCGCCAGGTAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR GCA 90 bp TGCTTCTCTCTAGGAAGACGCTCCTTTTCTCTAACCTGCTGCTCTCGGCCACCCCCAGCAGGTCAATCTTaGCAGCGTGCTGCCGGAACT +
Preference number: 2 (lower is better)
Translates to: CFSLGRRSFSLTCCSRPPPAGQS*QRAAGT
Trigger: AGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGG...GGGTGGCCGAGAGCAGCAGGTTAGAGAAAAGGAGCGTCTTCCTAGAGAGAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp TGCTTCTCTCTAGGAAGACGCTCCTTTTCTCTAACCTGCTGCTCTCGGCCACCCCAGGAGCTCCTCTCCTaGGAAGAACCTCTGGACTGG +
Preference number: 2 (lower is better)
Translates to: CFSLGRRSFSLTCCSRPPQELLS*EEPLDW
Trigger: CCAGTCCAGAGGTTCTTCCCAGGAGAGGAGCTCCTG...GGGTGGCCGAGAGCAGCAGGTTAGAGAAAAGGAGCGTCTTCCTAGAGAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CAA 90 bp GACGACTTCACCTCGCTTCCCTTTACAGCTAAGCATGTGCCTGAGTaGGCAGTGCAGCAGCATTCCTCTGGCCCTACCTCTCCAGAGCAA +
Preference number: 2 (lower is better)
Translates to: DDFTSLPFTAKHVPE*AVQQHSSGPTSPEQ
Trigger: TTGCTCTGGAGAGGTAGGGCCAGAGGAATGCTGCTGCACTGCCAACTCAGGCACATGCTTAGCTGTAAAGGGAAGCGAGGTGAAGTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR TCA 90 bp GCTGAATGCCGATCTCAAAAACCAGTGGGGGTATGGGTCCTTCACCCAGAGAACCCCGGGACAGCAGGTTaGACTGCTCACTTTGAGTCC +
Preference number: 2 (lower is better)
Translates to: AECRSQKPVGVWVLHPENPGTAG*TAHFES
Trigger: GGACTCAAAGTGAGCAGTTCAACCTGCTGTCCCGGG...GTTCTCTGGGTGAAGGACCCATACCCCCACTGGTTTTTGAGATCGGCATTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR GCA 90 bp AACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCTCTGCTTGGAGGTCAATCTTGCCAGCGTaGTGCCGGAACTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: NYSGQHRGGPSPSISAWRSILPA*CRNFSR
Trigger: CCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGA...CCTCCAAGCAGAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR GCA 90 bp TCCGTTCATTCTCCATGTCTGACTCAGATCTGCATCTTGCGCTACCGGATCTCGGGCCTGTCACCAGGCTaGGGAAGGGGCCGGATATAT +
Preference number: 2 (lower is better)
Translates to: SVHSPCLTQICILRYRISGLSPG*GRGRIY
Trigger: ATATATCCGGCCCCTTCCGCAGCCTGGTGACAGGCC...CGAGATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACATGGAGAATGAACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR TCA 90 bp TTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTAAGGCACGATGTCTTCACCCTCAGCGACTGGTaGCCTGGGTGGTGTGGGGCC +
Preference number: 2 (lower is better)
Translates to: FGELFDEGDFSRVRHDVFTLSDW*PGWCGA
Trigger: GGCCCCACACCACCCAGGTCACCAGTCGCTGAGGGT...GAAGACATCGTGCCTTACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR TCA 90 bp GTTCCCCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAATTGAACTGCTCACTTTaGGTCCGGCATTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: VPQRACQPRLVVLHKVHELNCSL*VRHFSS
Trigger: GGAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAA...TTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR GCA 90 bp GGGCACCAGACCCCTCTGGCCATCGAGGAGCTCTCCTTCATAGAACCCATCCTCTTCCCCGAGTATCTCTaGTTGGAGGTATTGGAATTC +
Preference number: 2 (lower is better)
Translates to: GHQTPLAIEELSFIEPILFPEYL*LEVLEF
Trigger: GAATTCCAATACCTCCAAGCAGAGATACTCGGGGAA...GAGGATGGGTTCTATGAAGGAGAGCTCCTCGATGGCCAGAGGGGTCTGGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CAA 90 bp TTACAGGTAGGGAGGGAGCTACAGGTGATAGCTATGCGCCCCCGTTaGTTAATAAGACGTCCCCTCCCACCTCCCAAATCAGAGCTTGGA +
Preference number: 2 (lower is better)
Translates to: LQVGRELQVIAMRPR*LIRRPLPPPKSELG
Trigger: TCCAAGCTCTGATTTGGGAGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAGCTCCCTCCCTACCTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR CAA 90 bp ATGTTGGGCCTGAGATTGAAGAACTGGTACTTGTACCTGGCGGCCTaGACGATGTCGAACTCCTCCTCGTTGAGGAAGATGACGTGGCTG +
Preference number: 2 (lower is better)
Translates to: MLGLRLKNWYLYLAA*TMSNSSSLRKMTWL
Trigger: CAGCCACGTCATCTTCCTCAACGAGGAGGAGTTCGACATCGTCAAGGCCGCCAGGTACAAGTACCAGTTCTTCAATCTCAGGCCCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR GCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGTTACAGCTAAGCATGTaGCTGAGTTGGCAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: HLPNQSLDNESRLPAVTELQLSM*LSWQCS
Trigger: GCTGCACTGCCAACTCAGGCACATGCTTAGCTGTAA...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR GCA 90 bp GGCGTGGAAACAGGTCTTCTTCAGGCCTCGGTTCAATCTAATTCCAGCTCTGTTAACATCTTGTGGGGGTaGTGGGGGTCCTGCAGGCAA +
Preference number: 2 (lower is better)
Translates to: GVETGLLQASVQSNSSSVNILWG*WGSCRQ
Trigger: TTGCCTGCAGGACCCCCAGCACCCCCACAAGATGTT...AACAGAGCTGGAATTAGATTGAACCGAGGCCTGAAGAAGACCTGTTTCCACGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp CCTCTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGAACTCGAGCCAGTGTTTaGAGTGTTCAGAGCCAACAC +
Preference number: 2 (lower is better)
Translates to: PLPGLPEPIDDVGDPEWRTRASV*SVQSQH
Trigger: GTGTTGGCTCTGAACACTCCAAACACTGGCTCGAGT...TCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR CCA 90 bp TCCCCGAGTATCTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGAACCTCTGGACTGGCTaGGGTCTGGACCTCCCCTGT +
Preference number: 2 (lower is better)
Translates to: SPSISAWRYWNSVHSPCLNLWTG*GLDLPC
Trigger: ACAGGGGAGGTCCAGACCCCAGCCAGTCCAGAGGTT...CAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp GCACGATGTCTTCTCCGATGTCGTCGATGTTCACGTCCAGGGTCCCGGCACTGTCCGAGTATCTCTGCTTaGAGGTATTGGAATTCCGTT +
Preference number: 2 (lower is better)
Translates to: ARCLLRCRRCSRPGSRHCPSISA*RYWNSV
Trigger: AACGGAATTCCAATACCTCCAAGCAGAGATACTCGG...ACAGTGCCGGGACCCTGGACGTGAACATCGACGACATCGGAGAAGACATCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CCA 90 bp TTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTAAGGCACGATGTCTTCCAGGCCCAGGACTCATaGCCGCGTCCACTCACGGGA +
Preference number: 2 (lower is better)
Translates to: FGELFDEGDFSRVRHDVFQAQDS*PRPLTG
Trigger: TCCCGTGAGTGGACGCGGCCATGAGTCCTGGGCCTG...GAAGACATCGTGCCTTACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647475.1
3UTR-3UTR TCA 90 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGATGGAAACCCTTTTTGCCTTTaGGCGCATTGGCGTATCTTG +
Preference number: 2 (lower is better)
Translates to: EPIDDVGDPEWRWTVGDGNPFCL*AHWRIL
Trigger: CAAGATACGCCAATGCGCTCAAAGGCAAAAAGGGTT...TCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540658.1
3UTR-3UTR GCA 90 bp TGGGTCCTTCACCCAGAGAACAAGTGCTCCAGCCTTTCCTCCGGGTTTGTAATCTGTCTGACTCAGATCTaGATCTTGCGCTACCGGATC +
Preference number: 2 (lower is better)
Translates to: WVLHPENKCSSLSSGFVICLTQI*ILRYRI
Trigger: GATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACA...GATTACAAACCCGGAGGAAAGGCTGGAGCACTTGTTCTCTGGGTGAAGGACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CCA 90 bp TCGATGTTCACGTCCAGGGTCCCGGCACTGTTGTCGGTGATGCCCGCATCTATGTCTGCTTGGAGGTATTaGAATTCCGTTCATTCTCCA +
Preference number: 2 (lower is better)
Translates to: SMFTSRVPALLSVMPASMSAWRY*NSVHSP
Trigger: TGGAGAATGAACGGAATTCCAATACCTCCAAGCAGA...CATAGATGCGGGCATCACCGACAACAGTGCCGGGACCCTGGACGTGAACATCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR TCA 90 bp CCAGCCCACAATAACACTTTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGCCAATAGCGCTCTCCTaGCCTTTGCCGAGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: PAHNNTFGELFDEGDFSRPIALS*PLPREV
Trigger: CACCTCCCTCGGCAAAGGTCAGGAGAGCGCTATTGG...CCTAGAAAAATCACCCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CAA 90 bp CAGGGTTACTTAAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTaGGAGTGTTCAGAGCCAACACTCGATCACCTGTGTTCACTACTC +
Preference number: 2 (lower is better)
Translates to: QGYLRKTRSGHSSQC*ECSEPTLDHLCSLL
Trigger: GAGTAGTGAACACAGGTGATCGAGTGTTGGCTCTGAACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAAGTAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR TCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTTTTTTAACCCCACAATaGAGCCTTAAGTCTACCACA +
Preference number: 2 (lower is better)
Translates to: SLDNESRLPAVTESNRSSFLTPQ*SLKSTT
Trigger: TGTGGTAGACTTAAGGCTTCATTGTGGGGTTAAAAA...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR TCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGTTTATTGAGTGTGTaGGCGCCAACAACAGAATTC +
Preference number: 2 (lower is better)
Translates to: HLPNQSLDNESRLPAVTESLLSV*APTTEF
Trigger: GAATTCTGTTGTTGGCGCTCACACACTCAATAAACT...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR GCA 90 bp TTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTAAGGCACGATGTCTTCATCTTGCCAGCGTGCTaGCGGAACTTCTCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: FGELFDEGDFSRVRHDVFILPAC*RNFSRS
Trigger: GGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGAT...GAAGACATCGTGCCTTACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CCA 90 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGATGGATTGAGAGTAGTGGGATaGAGCATCAGAAAGATAGAC +
Preference number: 2 (lower is better)
Translates to: EPIDDVGDPEWRWTVGDGLRVVG*SIRKID
Trigger: GTCTATCTTTCTGATGCTCCATCCCACTACTCTCAA...TCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540658.1
3UTR CAA 90 bp GCAACACAGAGGTGGACCTTCCCCGAGTATCTCTGCTTGGAGGTATaGGAATTCCGTTCATTCTCCATGTCTGACTCAGATCTGCATCTT +
Preference number: 2 (lower is better)
Translates to: ATQRWTFPEYLCLEV*EFRSFSMSDSDLHL
Trigger: AAGATGCAGATCTGAGTCAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGAAGGTCCACCTCTGTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGCTTTGTTCTCGTGGTTaGTTTAAAGTGGTTGGTAGT +
Preference number: 2 (lower is better)
Translates to: HLPNQSLDNESRLPAVTELCSRG*FKVVGS
Trigger: ACTACCAACCACTTTAAACCAACCACGAGAACAAAG...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR-3UTR CCA 90 bp GCCCACAATAACACTTTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTACGGGCAACACAGAGGTaGACCTTCCCCGAGTATCTC +
Preference number: 2 (lower is better)
Translates to: AHNNTFGELFDEGDFSRVRATQR*TFPEYL
Trigger: GAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCG...TACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CAA 90 bp GTGTTACAGTTTATTGAGTGTGTGAGCGCCAACAACAGAATTCACTaGGTAACATCGTACTGTCCCCGTTTCCCACCAGGAAAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: VLQFIECVSANNRIH*VTSYCPRFPPGKVR
Trigger: CCTGACCTTTCCTGGTGGGAAACGGGGACAGTACGATGTTACCAAGTGAATTCTGTTGTTGGCGCTCACACACTCAATAAACTGTAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR CAA 90 bp AGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTaGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: REQPLLFVLVVGLKW*VVQKCISLLVSGEK
Trigger: CTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR-3UTR GCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGCGGGGTGGCCGTTaGTTTGGCAAAGCTAAGGCA +
Preference number: 2 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLVRGGR*FGKAKA
Trigger: TGCCTTAGCTTTGCCAAAGCAACGGCCACCCCGCAC...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR CCA 90 bp GGCCAGAACCTTCACCTTATAGGCCATGTTGGGCCTGAGATTGAAGAACTGGTATCTGCTTGGAGGTATTaGAATTCCGTTCATTCTCCA +
Preference number: 2 (lower is better)
Translates to: GQNLHLIGHVGPEIEELVSAWRY*NSVHSP
Trigger: TGGAGAATGAACGGAATTCCAATACCTCCAAGCAGA...TACCAGTTCTTCAATCTCAGGCCCAACATGGCCTATAAGGTGAAGGTTCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR TCA 90 bp CATTGGCGTATCTTGAGAGTAGTGGGATGGAGCATCAGAAAGATAGACTTCTACTTCTTCCAAGAAGTTTaGGGGCACAAGGCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: HWRILRVVGWSIRKIDFYFFQEV*GHKAFL
Trigger: CAGAAAGGCCTTGTGCCCTCAAACTTCTTGGAAGAA...GTAGAAGTCTATCTTTCTGATGCTCCATCCCACTACTCTCAAGATACGCCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540658.1
3UTR-3UTR TCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGTCTAATGTGATCATTTaGGCTGCGTGCTTCATCAAC +
Preference number: 2 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKSNVII*AACFIN
Trigger: GTTGATGAAGCACGCAGCTCAAATGATCACATTAGA...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR CAA 90 bp TTCATCAACTTAGTATTGCATTGGTATACCAACAACAAACGCGTGTaGCAGCAACTTCTGTCACAGGATGATTGTGCTTTGAGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: FINLVLHWYTNNKRV*QQLLSQDDCALRRS
Trigger: GCTCCTCCTCAAAGCACAATCATCCTGTGACAGAAGTTGCTGCAACACGCGTTTGTTGTTGGTATACCAATGCAATACTAAGTTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR CCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCAGTGCATTTCTCTACTaGTGTCAGGGGAGAAGATTG +
Preference number: 2 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCSAFLY*CQGRRL
Trigger: CAATCTTCTCCCCTGACACCAGTAGAGAAATGCACT...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR-3UTR TCA 90 bp GCCGTTGCTTTGGCAAAGCTAAGGCAGGTAATAATTCACTTCATAAATGAAGACAGGGCAGGGGAGACATaGTCTGAAATTAGGTTGATA +
Preference number: 2 (lower is better)
Translates to: AVALAKLRQVIIHFINEDRAGET*SEIRLI
Trigger: TATCAACCTAATTTCAGATCATGTCTCCCCTGCCCT...GTCTTCATTTATGAAGTGAATTATTACCTGCCTTAGCTTTGCCAAAGCAACGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR CCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTAAAGGAAAACACGTTCTaGCCACTCGAGCCAGTGTTT +
Preference number: 2 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLKENTF*PLEPVF
Trigger: AAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTT...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR CAA 90 bp GATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTaGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCAT +
Preference number: 2 (lower is better)
Translates to: DGYGLIWSRFKLSLV*VWLMHYVDYLCAIH
Trigger: ATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR-3UTR GCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTAAGGGGCTTCAAGCTTaGTTGGATTTAAAATCAAGG +
Preference number: 2 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTKGLQA*LDLKSR
Trigger: CCTTGATTTTAAATCCAAGCAAGCTTGAAGCCCCTT...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR CCA 90 bp GTAGGTACAGTGTTACAGTTTATTGAGTGTGTGAGCGCCAACAACAGAATTCACTGCTTTTTCCAAGAGTaGCTAACAATGCAATATGCA +
Preference number: 2 (lower is better)
Translates to: VGTVLQFIECVSANNRIHCFFQE*LTMQYA
Trigger: TGCATATTGCATTGTTAGCCACTCTTGGAAAAAGCA...GTGAATTCTGTTGTTGGCGCTCACACACTCAATAAACTGTAACACTGTACCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR CAA 90 bp TTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATaGCTGTGTATTTGGGTATGGCATTTTGACAACGAAAGTAACAGA +
Preference number: 2 (lower is better)
Translates to: FGVAYALCGLLVCHS*LCIWVWHFDNESNR
Trigger: TCTGTTACTTTCGTTGTCAAAATGCCATACCCAAATACACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR CAA 90 bp AAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTaGTGTGCCATTCATTGCTGTGTATTTGGGTATGGCATTTTGACA +
Preference number: 2 (lower is better)
Translates to: KLSLVLVWLMHYVDY*CAIHCCVFGYGILT
Trigger: TGTCAAAATGCCATACCCAAATACACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR-3UTR TCA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTACACTACTCATCTGCTTaGCCTTGGGTTAAGTTTCTA +
Preference number: 2 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLHYSSA*PWVKFL
Trigger: TAGAAACTTAACCCAAGGTCAAGCAGATGAGTAGTG...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR TCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTTTTAGGAAGTACTTaGGTCATGAAAGCCCTAGTT +
Preference number: 2 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTFLGST*VMKALV
Trigger: AACTAGGGCTTTCATGACTCAAGTACTTCCTAAAAA...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR-3UTR GCA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTAGGGCAGATGACAAATaGACAAAGACTGGAATTACA +
Preference number: 2 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFRADDK*TKTGIT
Trigger: TGTAATTCCAGTCTTTGTGCATTTGTCATCTGCCCT...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR-3UTR GCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGAGGTTGGAGTACTGGTaGTTTACCAAACAAAGTTAC +
Preference number: 2 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLRLEYW*FTKQSY
Trigger: GTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCT...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR-3UTR TCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGGAAAGTTATGCATTATaGGGCAAGCATTTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLESYAL*GKHFEK
Trigger: CTTCTCAAAATGCTTGCCTCATAATGCATAACTTTC...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR-3UTR GCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGTGTGGATTACTTGTGTaGCATTCATTGCTGTGTATT +
Preference number: 2 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLCGLLV*HSLLCI
Trigger: AATACACAGCAATGAATGGCACACAAGTAATCCACA...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR CCA 72 bp ACACCGGGGTGCCCTGTGGCTGTGGCAGGATGCGGCTaGGTGAGGGCGACCGCCTTCCGGGGCCCACGGGCG +
Preference number: 3 (lower is better)
Translates to: TPGCPVAVAGCG*VRATAFRGPRA
Trigger: CGCCCGTGGGCCCCGGAAGGCGGTCGCCCTCACCCAGCCGCATCCTGCCACAGCCACAGGGCACCCCGGTGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 72 bp CGCCCTGGGCGGAGAGGGTCCGCACGGTCACGCCCTTaGCCTCCAGGCTCCGCAGCCGCACAAGCTCCACGG +
Preference number: 3 (lower is better)
Translates to: RPGRRGSARSRP*PPGSAAAQAPR
Trigger: CCGTGGAGCTTGTGCGGCTGCGGAGCCTGGAGGCCAAGGGCGTGACCGTGCGGACCCTCTCCGCCCAGGGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 72 bp GCGCGGCCTCCCGGGCCATGGCCTTGGCGACGGTGGTaGACACCGGGGTGCCCTGTGGCTGTGGCAGGATGC +
Preference number: 3 (lower is better)
Translates to: ARPPGPWPWRRW*TPGCPVAVAGC
Trigger: GCATCCTGCCACAGCCACAGGGCACCCCGGTGTCCACCACCGTCGCCAAGGCCATGGCCCGGGAGGCCGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR GCA 72 bp GACCGCCTTCCGGGGCCCACGGGCGGCTCCAGCATGTaGCCATGCACAGGGCCAGGTGCACGGCTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: DRLPGPTGGSSM*PCTGPGARLCS
Trigger: GGAGCAGAGCCGTGCACCTGGCCCTGTGCATGGGCACATGCTGGAGCCGCCCGTGGGCCCCGGAAGGCGGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 72 bp TCTGCGCGGCCTCCCGGGCCATGGCCTTGGCGACGGTaGTGGACACCGGGGTGCCCTGTGGCTGTGGCAGGA +
Preference number: 3 (lower is better)
Translates to: SARPPGPWPWRR*WTPGCPVAVAG
Trigger: TCCTGCCACAGCCACAGGGCACCCCGGTGTCCACCACCGTCGCCAAGGCCATGGCCCGGGAGGCCGCGCAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 72 bp GGAACGGCAGCAACTGCAGAGTCCACGGACTCGCCCTaGGCGGAGAGGGTCCGCACGGTCACGCCCTTGGCC +
Preference number: 3 (lower is better)
Translates to: GTAATAESTDSP*AERVRTVTPLA
Trigger: GGCCAAGGGCGTGACCGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTGGACTCTGCAGTTGCTGCCGTTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 72 bp TGCGCCATTGGACAGCCCGGTGGGCGTCAGCACAGGTaGTCTCCAGGAGACCCGGATGGTGGCGGGGGTCAC +
Preference number: 3 (lower is better)
Translates to: CAIGQPGGRQHR*SPGDPDGGGGH
Trigger: GTGACCCCCGCCACCATCCGGGTCTCCTGGAGACCACCTGTGCTGACGCCCACCGGGCTGTCCAATGGCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp CACGGACTCGCCCTGGGCGGAGAGGGTCCGCACGGTCACGCCCTTGGCCTCCAGTCCAGCTCTCGAACCTaGGACTCTAGCAGCCGCACT +
Preference number: 3 (lower is better)
Translates to: HGLALGGEGPHGHALGLQSSSRT*DSSSRT
Trigger: AGTGCGGCTGCTAGAGTCCAAGGTTCGAGAGCTGGA...CTGGAGGCCAAGGGCGTGACCGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR GCA 72 bp GCCACCACCACGTCCTTGCCCACCAGCAGCGTGCACTaGAGCTCATCCGAGCTGCCCCTGCTGGTGACGCAC +
Preference number: 3 (lower is better)
Translates to: ATTTSLPTSSVH*SSSELPLLVTH
Trigger: GTGCGTCACCAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 72 bp AGCATGTGCCCATGCACAGGGCCAGGTGCACGGCTCTaGTCCCAGGCCTCATCCATCCTGGCGTGGGGACCC +
Preference number: 3 (lower is better)
Translates to: SMCPCTGPGARL*SQASSILAWGP
Trigger: GGGTCCCCACGCCAGGATGGATGAGGCCTGGGAGCAGAGCCGTGCACCTGGCCCTGTGCATGGGCACATGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR TCA 72 bp TGGTGGGTAGCCAGGAGAGCTGGGCGGAGATCTGCGTaGTGTTGTCCACCCGCAGGTGGGAGGGGGCCACCA +
Preference number: 3 (lower is better)
Translates to: WWVARRAGRRSA*CCPPAGGRGPP
Trigger: TGGTGGCCCCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGCCCAGCTCTCCTGGCTACCCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 72 bp ACCGCGCTGCCACCCAGCAGGTCAATCTTGCCAGCGTaGTGCCGGAACTTCTCCAGGTCCCGGGACAGCAGG +
Preference number: 3 (lower is better)
Translates to: TALPPSRSILPA*CRNFSRSRDSR
Trigger: CCTGCTGTCCCGGGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGTGGCAGCGCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 72 bp CTGTTGGTGGGTAGCCAGGAGAGCTGGGCGGAGATCTaGGTGATGTTGTCCACCCGCAGGTGGGAGGGGGCC +
Preference number: 3 (lower is better)
Translates to: LLVGSQESWAEI*VMLSTRRWEGA
Trigger: GGCCCCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGCCCAGCTCTCCTGGCTACCCACCAACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 72 bp GCGCTGCCACCCAGCAGGTCAATCTTGCCAGCGTGCTaGCGGAACTTCTCCAGGTCCCGGGACAGCAGGTTG +
Preference number: 3 (lower is better)
Translates to: ALPPSRSILPAC*RNFSRSRDSRL
Trigger: CAACCTGCTGTCCCGGGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGTGGCAGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 72 bp GGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTaGGGAAGGGGCCGGATATATTCACCGATCGCAGAG +
Preference number: 3 (lower is better)
Translates to: GLADRGSGLSPG*GRGRIYSPIAE
Trigger: CTCTGCGATCGGTGAATATATCCGGCCCCTTCCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CCA 72 bp GCCAAGCACAGTCTGAACCCTCAGCGACTGGTGACCTaGGTGGTGTGGGGCCTACGGAGGGCAATGGGCCTC +
Preference number: 3 (lower is better)
Translates to: AKHSLNPQRLVT*VVWGLRRAMGL
Trigger: GAGGCCCATTGCCCTCCGTAGGCCCCACACCACCCAGGTCACCAGTCGCTGAGGGTTCAGACTGTGCTTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 72 bp CACCAGGACGTTGTAGCTGCTCACCGTTCCCCATCCTaGTGGCACCGCCGGGGGCTCCCAGCCCACAATAAC +
Preference number: 3 (lower is better)
Translates to: HQDVVAAHRSPS*WHRRGLPAHNN
Trigger: GTTATTGTGGGCTGGGAGCCCCCGGCGGTGCCACCAGGATGGGGAACGGTGAGCAGCTACAACGTCCTGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CCA 72 bp GCACGGCTCTGCTCCCAGGCCTCATCCATCCTGGCGTaGGGACCCAGGTGCTCGTCTTTGGTTTCGGGGACT +
Preference number: 3 (lower is better)
Translates to: ARLCSQASSILA*GPRCSSLVSGT
Trigger: AGTCCCCGAAACCAAAGACGAGCACCTGGGTCCCCACGCCAGGATGGATGAGGCCTGGGAGCAGAGCCGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp GTGGCTGTGGCAGGATGCGGCTGGGTGAGGGCGACCGCCTTCCGGGGCCCACGGGTTGAACTGCTCACTTaGAGTCCGGCATTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: VAVAGCGWVRATAFRGPRVELLT*SPAFLF
Trigger: GAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAAC...CCGTGGGCCCCGGAAGGCGGTCGCCCTCACCCAGCCGCATCCTGCCACAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp GGGCACCAGACCCCTCTGGCCATCGAGGAGCTCTCCTTCATAGAACCCATCCTCGACAGGAAGGTGGGCTaGGCGGACAGAGGCTCCGGC +
Preference number: 3 (lower is better)
Translates to: GHQTPLAIEELSFIEPILDRKVG*ADRGSG
Trigger: GCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTC...GAGGATGGGTTCTATGAAGGAGAGCTCCTCGATGGCCAGAGGGGTCTGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CAA 90 bp GAGACCATCTGCTTGCCAAGTTCAGAGCCTTTCAGGAAGTCGTCCACCGAGGCGCGCACGGTCACGCCCTaGGCCTCCAGGCTCCGCAGC +
Preference number: 3 (lower is better)
Translates to: ETICLPSSEPFRKSSTEARTVTP*ASRLRS
Trigger: GCTGCGGAGCCTGGAGGCCAAGGGCGTGACCGTGCG...CGCCTCGGTGGACGACTTCCTGAAAGGCTCTGAACTTGGCAAGCAGATGGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR GCA 72 bp CTGCCCTTTGGCATACACGCCGTAGCCGGTAACGTTTaGGCCATTGGACAGCCCGGTGGGCGTCAGCACAGG +
Preference number: 3 (lower is better)
Translates to: LPFGIHAVAGNV*AIGQPGGRQHR
Trigger: CCTGTGCTGACGCCCACCGGGCTGTCCAATGGCGCAAACGTTACCGGCTACGGCGTGTATGCCAAAGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 72 bp AGTCTGAACCCTCAGCGACTGGTGACCTGGGTGGTGTaGGGCCTACGGAGGGCAATGGGCCTCTGCCTGAGA +
Preference number: 3 (lower is better)
Translates to: SLNPQRLVTWVV*GLRRAMGLCLR
Trigger: TCTCAGGCAGAGGCCCATTGCCCTCCGTAGGCCCCACACCACCCAGGTCACCAGTCGCTGAGGGTTCAGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 72 bp GGAAGCAGAGGCAGGTCAGAGCAGGCCCAGGACTCATaGCCGCGTCCACTCACGGGAAAAGCATCGCCAAGC +
Preference number: 3 (lower is better)
Translates to: GSRGRSEQAQDS*PRPLTGKASPS
Trigger: GCTTGGCGATGCTTTTCCCGTGAGTGGACGCGGCCATGAGTCCTGGGCCTGCTCTGACCTGCCTCTGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647475.1
3UTR-3UTR CAA 90 bp CCAGCATGTGCCCATGCACAGGGCCAGGTGCACGGCTCTGCTCCCAGGCCTCATGTGCAGGCTGCCATGTaGAGCTTCTCGATGAGGGCT +
Preference number: 3 (lower is better)
Translates to: PACAHAQGQVHGSAPRPHVQAAM*SFSMRA
Trigger: AGCCCTCATCGAGAAGCTCAACATGGCAGCCTGCAC...ATGAGGCCTGGGAGCAGAGCCGTGCACCTGGCCCTGTGCATGGGCACATGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp CAGATCTGCATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTGCAGCCACTTaGCCACCAGGAGGGTCAGGG +
Preference number: 3 (lower is better)
Translates to: QICILRYRISTGRWAWRTEAAAT*PPGGSG
Trigger: CCCTGACCCTCCTGGTGGCAAAGTGGCTGCAGCCTC...TGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCAGATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp GCGGGAGCTGCCACGGCATCTGGTGGGGTTTGGCCAGAACCTTCACCTTATAGGAGGGTCCCGGCACTGTaGTCGGTGATGCCCGCATCT +
Preference number: 3 (lower is better)
Translates to: AGAATASGGVWPEPSPYRRVPAL*SVMPAS
Trigger: AGATGCGGGCATCACCGACAACAGTGCCGGGACCCT...CCTATAAGGTGAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 72 bp GAACCTCTGGACTGGCTGGGGTCTGGACCTCCCCTGTaGCAAGCACAGTCTGAACCCTCAGCGACTGGTGAC +
Preference number: 3 (lower is better)
Translates to: EPLDWLGSGPPL*QAQSEPSATGD
Trigger: GTCACCAGTCGCTGAGGGTTCAGACTGTGCTTGGCACAGGGGAGGTCCAGACCCCAGCCAGTCCAGAGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 72 bp ATCTGCATCTTGCGCTACCGGATCTCGACAGGAAGGTaGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAG +
Preference number: 3 (lower is better)
Translates to: ICILRYRISTGR*AWRTEAPACHQ
Trigger: CTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCAGAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CCA 72 bp GCTCCAGCGGGAGCTGCCACGGCATCTGGTGGGGTTTaGCCAGAACCTTCACCTTATAGGCCATGTTGGGCC +
Preference number: 3 (lower is better)
Translates to: APAGAATASGGV*PEPSPYRPCWA
Trigger: GGCCCAACATGGCCTATAAGGTGAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CAA 90 bp ATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTCTATTGGACTTTGGCTaGGGAGGAGGTGAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: ISTGRWAWRTEAPACHQALLDFG*GGGEAA
Trigger: TGCAGCCTCACCTCCTCCCAAGCCAAAGTCCAATAG...AGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR TCA 72 bp TGGTGTGGGGCCTACGGAGGGCAATGGGCCTCTGCCTaGGAATGCTGCGGGAGAGGGAAGCCCCTTTCTATT +
Preference number: 3 (lower is better)
Translates to: WCGAYGGQWASA*ECCGRGKPLSI
Trigger: AATAGAAAGGGGCTTCCCTCTCCCGCAGCATTCTCAGGCAGAGGCCCATTGCCCTCCGTAGGCCCCACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR GCA 72 bp GTGGAGAACTCCACAAAGGCCTCCTTCTTCTCCCTTTaGTCCAGCGGGAGCTGCCACGGCATCTGGTGGGGT +
Preference number: 3 (lower is better)
Translates to: VENSTKASFFSL*SSGSCHGIWWG
Trigger: ACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAGGAGGCCTTTGTGGAGTTCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 72 bp TCCCAGGCCTCATCCATCCTGGCGTGGGGACCCAGGTaGTCGTCTTTGGTTTCGGGGACTCCAGAACTTGCT +
Preference number: 3 (lower is better)
Translates to: SQASSILAWGPR*SSLVSGTPELA
Trigger: AGCAAGTTCTGGAGTCCCCGAAACCAAAGACGAGCACCTGGGTCCCCACGCCAGGATGGATGAGGCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR GCA 72 bp CGTCCTCCTCGTCTGAGGCGGCGTACTGCCCCGCGCTaGTTCTCTCTAGGAAGACGCTCCTTTTCTCTAACC +
Preference number: 3 (lower is better)
Translates to: RPPRLRRRTAPR*FSLGRRSFSLT
Trigger: GGTTAGAGAAAAGGAGCGTCTTCCTAGAGAGAAGCAGCGCGGGGCAGTACGCCGCCTCAGACGAGGAGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 72 bp GGCACTGTTGTCGGTGATGCCCGCATCTATGTGGGTTaGGGAGTGGAGGTCCAGGATGTGCTCTCCCTCCAG +
Preference number: 3 (lower is better)
Translates to: GTVVGDARIYVG*GVEVQDVLSLQ
Trigger: CTGGAGGGAGAGCACATCCTGGACCTCCACTCCCCAACCCACATAGATGCGGGCATCACCGACAACAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CAA 90 bp GTACCTGGCGGCCTTGACGATGTCGAACTCCTCCTCGTTGAGGAAGATGACGTGCCCAGCAGGTCAATCTaGCCAGCGTGCTGCCGGAAC +
Preference number: 3 (lower is better)
Translates to: VPGGLDDVELLLVEEDDVPSRSI*PACCRN
Trigger: GTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGG...CACGTCATCTTCCTCAACGAGGAGGAGTTCGACATCGTCAAGGCCGCCAGGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CAA 90 bp TCGATGTTCACGTCCAGGGTCCCGGCACTGTTGTCGGTGATGCCCGCATCTATGAACTGTGGGAAAGGCTaGCTGGGGGCCGTGGAGATG +
Preference number: 3 (lower is better)
Translates to: SMFTSRVPALLSVMPASMNCGKG*LGAVEM
Trigger: CATCTCCACGGCCCCCAGCAAGCCTTTCCCACAGTT...CATAGATGCGGGCATCACCGACAACAGTGCCGGGACCCTGGACGTGAACATCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CAA 90 bp TCCTTGCCCACCAGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGGTGCCCGAGTATCTCTGCTaGGAGGTATTGGAATTCCGT +
Preference number: 3 (lower is better)
Translates to: SLPTSSVHCSSSELPLLVPEYLC*EVLEFR
Trigger: ACGGAATTCCAATACCTCCAAGCAGAGATACTCGGG...CACCAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CAA 90 bp GGGGGTCCTGCAGGCAACGTGGAGAACTCCACAAAGGCCTCCTTCTTCTCCCTTGAGATCTGCGTGATGTaGTCCACCCGCAGGTGGGAG +
Preference number: 3 (lower is better)
Translates to: GGPAGNVENSTKASFFSLEICVM*STRRWE
Trigger: CTCCCACCTGCGGGTGGACAACATCACGCAGATCTC...AAGGGAGAAGAAGGAGGCCTTTGTGGAGTTCTCCACGTTGCCTGCAGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp CCAGGAGAGCTGGGCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGGTTGAACTGCTCACTTaGAGTCCGGCATTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: PGELGGDLRDVVHPQVGGVELLT*SPAFLF
Trigger: GAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAAC...CCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGCCCAGCTCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CAA 90 bp GGAATGGTTGATGAAGTTCTGATCCTGCTCGTTCCCCAGCGTGCTTGCCAACCGCCCAGCAGGTCAATCTaGCCAGCGTGCTGCCGGAAC +
Preference number: 3 (lower is better)
Translates to: GMVDEVLILLVPQRACQPPSRSI*PACCRN
Trigger: GTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGG...CGGTTGGCAAGCACGCTGGGGAACGAGCAGGATCAGAACTTCATCAACCATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CAA 90 bp CCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAGTTGGTCCAGCTCTCGAACCTaGGACTGCGTCAGAAGCTGC +
Preference number: 3 (lower is better)
Translates to: PACLPTATRCPAQSPRSWSSSRT*DCVRSC
Trigger: GCAGCTTCTGACGCAGTCCAAGGTTCGAGAGCTGGA...CCAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647475.1
3UTR CCA 72 bp ACAGCACGCCAGAGAGAGGCCCCAGACATAAATGTGTaGGTTCCGTTTCTCTGTCTCGAGGGAGTGCGGGGT +
Preference number: 3 (lower is better)
Translates to: TARQREAPDINV*VPFLCLEGVRG
Trigger: ACCCCGCACTCCCTCGAGACAGAGAAACGGAACCCACACATTTATGTCTGGGGCCTCTCTCTGGCGTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR CCA 72 bp GAGAGCAGCCAAGTCCTGGTGATGTCGGGGAGGCCTTaGATTCTACTGGGTCTGAGGCCAGCAGATTTGAGC +
Preference number: 3 (lower is better)
Translates to: ESSQVLVMSGRP*ILLGLRPADLS
Trigger: GCTCAAATCTGCTGGCCTCAGACCCAGTAGAATCCAAGGCCTCCCCGACATCACCAGGACTTGGCTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp CCTCTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGAGGGGTGGCCGTTGCTTaGGCAAAGCTAAGGCAGGTA +
Preference number: 3 (lower is better)
Translates to: PLPGLPEPIDDVGDPEWRGVAVA*AKLRQV
Trigger: TACCTGCCTTAGCTTTGCCAAAGCAACGGCCACCCC...TCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR CAA 90 bp GCTCCCCAGCGTGAGGTTCATGCGTGTCTCCTTGTCCACCAGGACGTTGTAGCTACTCAGATCTGCATCTaGCGCTACCGGATCTCGACA +
Preference number: 3 (lower is better)
Translates to: APQREVHACLLVHQDVVATQICI*RYRIST
Trigger: TGTCGAGATCCGGTAGCGCAAGATGCAGATCTGAGT...AGCTACAACGTCCTGGTGGACAAGGAGACACGCATGAACCTCACGCTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR TCA 72 bp GCTGCCGGAACTTCTCCAGGTCCCGGGACAGCAGGTTaGACTGCTCACTTTGAGTCCGGCATTTCTCTTCCA +
Preference number: 3 (lower is better)
Translates to: AAGTSPGPGTAG*TAHFESGISLP
Trigger: TGGAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAACCTGCTGTCCCGGGACCTGGAGAAGTTCCGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 72 bp GATGAAGTTCTGATCCTGCTCGTTCCCCAGCGTGCTTaGCAACCGCGACTCGTTGTCCTGCACAAAGTCCAC +
Preference number: 3 (lower is better)
Translates to: DEVLILLVPQRA*QPRLVVLHKVH
Trigger: GTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACGAGCAGGATCAGAACTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 72 bp GGTGACGCACTGCACGGAGATGCGGTAGGTGCAGGCTaGCATGTTGAGCTTCTCGATGAGGGCTTTAGTTCT +
Preference number: 3 (lower is better)
Translates to: GDALHGDAVGAG*HVELLDEGFSS
Trigger: AGAACTAAAGCCCTCATCGAGAAGCTCAACATGGCAGCCTGCACCTACCGCATCTCCGTGCAGTGCGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CCA 72 bp CATCCATCCTGGCGTGGGGACCCAGGTGCTCGTCTTTaGTTTCGGGGACTCCAGAACTTGCTAATGGCTTTG +
Preference number: 3 (lower is better)
Translates to: HPSWRGDPGARL*FRGLQNLLMAL
Trigger: CAAAGCCATTAGCAAGTTCTGGAGTCCCCGAAACCAAAGACGAGCACCTGGGTCCCCACGCCAGGATGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp GCTTGGCCAAACAGACTTCCTCTGCAGTCTCATCAGAAGGAGTGGGAGGCCCTCCCTTTCTATTGGACTTaGGCTTGGGAGGAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: AWPNRLPLQSHQKEWEALPFYWT*AWEEVR
Trigger: CCTCACCTCCTCCCAAGCCAAAGTCCAATAGAAAGG...GAGGGCCTCCCACTCCTTCTGATGAGACTGCAGAGGAAGTCTGTTTGGCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp CTTCTCTCTAGGAAGACGCTCCTTTTCTCTAACCTGCTGCTCTCGGCCACCCTCTCGAACTCCTCCTCGTaGAGGAAGATGACGTGGCTG +
Preference number: 3 (lower is better)
Translates to: LLSRKTLLFSNLLLSATLSNSSS*RKMTWL
Trigger: CAGCCACGTCATCTTCCTCAACGAGGAGGAGTTCGA...GAGGGTGGCCGAGAGCAGCAGGTTAGAGAAAAGGAGCGTCTTCCTAGAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp CTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGCGCATTGGCGTATCTaGAGAGTAGTGGGATGGAGC +
Preference number: 3 (lower is better)
Translates to: LPEPIDDVGDPEWRWTVGAHWRI*RVVGWS
Trigger: GCTCCATCCCACTACTCTCAAGATACGCCAATGCGC...CCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540658.1
3UTR CCA 72 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATaGACTGTGGGGGATGGAGCTCTCCTTGCTGTACCT +
Preference number: 3 (lower is better)
Translates to: EPIDDVGDPEWR*TVGDGALLAVP
Trigger: AGGTACAGCAAGGAGAGCTCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
3UTR-3UTR CAA 90 bp GCTCCCCAGCGTGAGGTTCATGCGTGTCTCCTTGTCCACCAGGACGTTGTAGCTCTCTGCTTGGAGGTATaGGAATTCCGTTCATTCTCC +
Preference number: 3 (lower is better)
Translates to: APQREVHACLLVHQDVVALCLEV*EFRSFS
Trigger: GGAGAATGAACGGAATTCCAATACCTCCAAGCAGAG...AGCTACAACGTCCTGGTGGACAAGGAGACACGCATGAACCTCACGCTGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CAA 90 bp GGCGTGGAAACAGGTCTTCTTCAGGCCTCGGTTCAATCTAATTCCAGCTCTGTTGCCAACCGCGACTCGTaGTCCTGCACAAAGTCCACG +
Preference number: 3 (lower is better)
Translates to: GVETGLLQASVQSNSSSVANRDS*SCTKST
Trigger: CGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGC...AACAGAGCTGGAATTAGATTGAACCGAGGCCTGAAGAAGACCTGTTTCCACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR TCA 72 bp ATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTaGCAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGT +
Preference number: 3 (lower is better)
Translates to: IRAWTMRADCQR*QRATAPLCSRG
Trigger: ACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR CCA 72 bp AGCGCTGAATGCCGATCTCAAAAACCAGTGGGGGTATaGGTCCTTCACCCAGAGAACAAGTGCTCCAGCCTT +
Preference number: 3 (lower is better)
Translates to: SAECRSQKPVGV*VLHPENKCSSL
Trigger: AAGGCTGGAGCACTTGTTCTCTGGGTGAAGGACCCATACCCCCACTGGTTTTTGAGATCGGCATTCAGCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp ACTGTGGGGGATGGAGCTCTCCTTGCTGTACCTGAACCCTCAGGAGGAACCCTTCTTCTTCCAAGAAGTTaGAGGGCACAAGGCCTTTCT +
Preference number: 3 (lower is better)
Translates to: TVGDGALLAVPEPSGGTLLLPRS*RAQGLS
Trigger: AGAAAGGCCTTGTGCCCTCAAACTTCTTGGAAGAAG...AAGGGTTCCTCCTGAGGGTTCAGGTACAGCAAGGAGAGCTCCATCCCCCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540658.1
3UTR GCA 72 bp CGGGCAACACAGAGGTGGACCTTCCCCGAGTATCTCTaGTTGGAGGTATTGGAATTCCGTTCATTCTCCATG +
Preference number: 3 (lower is better)
Translates to: RATQRWTFPEYL*LEVLEFRSFSM
Trigger: CATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR GCA 72 bp CGTGTTAATAGCATGCTTGGCCAAACAGACTTCCTCTaGAGTCTCATCAGAAGGAGTGGGAGGCCCTCGGAA +
Preference number: 3 (lower is better)
Translates to: RVNSMLGQTDFL*SLIRRSGRPSE
Trigger: TTCCGAGGGCCTCCCACTCCTTCTGATGAGACTGCAGAGGAAGTCTGTTTGGCCAAGCATGCTATTAACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 72 bp TCTGAGCAGATTGCAGGGAAGGTGATGATTCACTCCTaGATAGGTGAGGAGAACGTGGCACATGGGGAAAGG +
Preference number: 3 (lower is better)
Translates to: SEQIAGKVMIHS*IGEENVAHGER
Trigger: CCTTTCCCCATGTGCCACGTTCTCCTCACCTATCCAGGAGTGAATCATCACCTTCCCTGCAATCTGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp TCCCCGAGTATCTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGGATGTCGGGGAGGCCTaGGATTCTACTGGGTCTGAG +
Preference number: 3 (lower is better)
Translates to: SPSISAWRYWNSVHSPCLDVGEA*DSTGSE
Trigger: CTCAGACCCAGTAGAATCCAAGGCCTCCCCGACATC...CAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp CCTCTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATTGCCTTTGAGCGCATaGGCGTATCTTGAGAGTAGT +
Preference number: 3 (lower is better)
Translates to: PLPGLPEPIDDVGDPEWRLPLSA*AYLESS
Trigger: ACTACTCTCAAGATACGCCAATGCGCTCAAAGGCAA...TCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540658.1
3UTR CCA 72 bp AAGGTAGAGGCAGGGTTACTTAAGGAAAACACGTTCTaGCCACTCGAGCCAGTGTTTGGAGTGTTCAGAGCC +
Preference number: 3 (lower is better)
Translates to: KVEAGLLKENTF*PLEPVFGVFRA
Trigger: GGCTCTGAACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAAGTAACCCTGCCTCTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR CCA 72 bp CATAAGACAGCGCTGAATGCCGATCTCAAAAACCAGTaGGGGTATGGGTCCTTCACCCAGAGAACAAGTGCT +
Preference number: 3 (lower is better)
Translates to: HKTALNADLKNQ*GYGSFTQRTSA
Trigger: AGCACTTGTTCTCTGGGTGAAGGACCCATACCCCCACTGGTTTTTGAGATCGGCATTCAGCGCTGTCTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR-3UTR CAA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTCAGGAGGAACCCTTTTaGCCTTTGAGCGCATTGGCG +
Preference number: 3 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLQEEPF*PLSALA
Trigger: CGCCAATGCGCTCAAAGGCAAAAAGGGTTCCTCCTG...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540658.1
3UTR TCA 72 bp AACAAGTGCTCCAGCCTTTCCTCCGGGTTTGTAATCTaGGCAGATTGCAGGGAAGGTGATGATTCACTCCTG +
Preference number: 3 (lower is better)
Translates to: NKCSSLSSGFVI*ADCREGDDSLL
Trigger: CAGGAGTGAATCATCACCTTCCCTGCAATCTGCTCAGATTACAAACCCGGAGGAAAGGCTGGAGCACTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CCA 72 bp GGTGGACCTTCCCCGAGTATCTCTGCTTGGAGGTATTaGAATTCCGTTCATTCTCCATGTCTGACTCAGATC +
Preference number: 3 (lower is better)
Translates to: GGPSPSISAWRY*NSVHSPCLTQI
Trigger: GATCTGAGTCAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGAAGGTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CCA 72 bp CAACACAGAGGTGGACCTTCCCCGAGTATCTCTGCTTaGAGGTATTGGAATTCCGTTCATTCTCCATGTCTG +
Preference number: 3 (lower is better)
Translates to: QHRGGPSPSISA*RYWNSVHSPCL
Trigger: CAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGAAGGTCCACCTCTGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR-3UTR CAA 90 bp CTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGACTCAGATCTGGGAAGCCCCTTTCTATaGGACTTTGGCTTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: LCLEVLEFRSFSMSDSDLGSPFL*DFGLGG
Trigger: TCCTCCCAAGCCAAAGTCCAATAGAAAGGGGCTTCC...CAGATCTGAGTCAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR TCA 72 bp CAACAAACGCGTGTTGCAGCAACTTCTGTCACAGGATaGTTGTGCTTTGAGGAGGAGCATAGCTCTCTCGTA +
Preference number: 3 (lower is better)
Translates to: QQTRVAATSVTG*LCFEEEHSSLV
Trigger: TACGAGAGAGCTATGCTCCTCCTCAAAGCACAATCATCCTGTGACAGAAGTTGCTGCAACACGCGTTTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR GCA 72 bp CTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGTaGATTTCTCTACTGGTGTCAGGGGAGAAGATTGGG +
Preference number: 3 (lower is better)
Translates to: LVVGLKWLVVQK*ISLLVSGEKIG
Trigger: CCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAACCACTTTAAACCAACCACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR-3UTR CAA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCCACTCGAGCCAGTGTTaGGAGTGTTCAGAGCCAACA +
Preference number: 3 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFHSSQC*ECSEPT
Trigger: TGTTGGCTCTGAACACTCCAAACACTGGCTCGAGTG...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR CAA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTGCTATGCGCCCCCGTTaGTTAATAAGACGTCCCCTC +
Preference number: 3 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFAMRPR*LIRRPL
Trigger: GAGGGGACGTCTTATTAACAAACGGGGGCGCATAGC...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR GCA 72 bp TTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTaGACCCAGCTTTTTCAGCAGTTTCTTGCCTTTGGA +
Preference number: 3 (lower is better)
Translates to: FGSCPEAHESFH*TQLFQQFLAFG
Trigger: TCCAAAGGCAAGAAACTGCTGAAAAAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
3UTR CCA 72 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTaGTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTG +
Preference number: 3 (lower is better)
Translates to: QPLLFVLVVGLK*LVVQKCISLLV
Trigger: CACCAGTAGAGAAATGCACTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR-3UTR CAA 90 bp GCCGTTGCTTTGGCAAAGCTAAGGCAGGTAATAATTCACTTCATAAATGAAGACAACAACAAACGCGTGTaGCAGCAACTTCTGTCACAG +
Preference number: 3 (lower is better)
Translates to: AVALAKLRQVIIHFINEDNNKRV*QQLLSQ
Trigger: CTGTGACAGAAGTTGCTGCAACACGCGTTTGTTGTT...GTCTTCATTTATGAAGTGAATTATTACCTGCCTTAGCTTTGCCAAAGCAACGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR CAA 90 bp GCATTCCTGGGGTGGTTGGTATACTATAGAAATATTGGAGATGGCACACTGGTTCAAGGGGCTTCAAGCTaGCTTGGATTTAAAATCAAG +
Preference number: 3 (lower is better)
Translates to: AFLGWLVYYRNIGDGTLVQGASS*LGFKIK
Trigger: CTTGATTTTAAATCCAAGCAAGCTTGAAGCCCCTTG...AACCAGTGTGCCATCTCCAATATTTCTATAGTATACCAACCACCCCAGGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR CAA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTATCGGTATCTTCAGTaGCTCACTTACGTGAAGGCT +
Preference number: 3 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTYRYLQ*LTYVKA
Trigger: AGCCTTCACGTAAGTGAGCAACTGAAGATACCGATA...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR CAA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCGGGCTTCAAGCTTGCTaGGATTTAAAATCAAGGTCT +
Preference number: 3 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCGLQAC*DLKSRS
Trigger: AGACCTTGATTTTAAATCCAAGCAAGCTTGAAGCCC...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR-3UTR CAA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGCACAGCCTGTACAACTaGATCTCAAACCACTGTGTC +
Preference number: 3 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLHSLYN*ISNHCV
Trigger: GACACAGTGGTTTGAGATCAAGTTGTACAGGCTGTG...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR-3UTR CAA 90 bp GCCGTTGCTTTGGCAAAGCTAAGGCAGGTAATAATTCACTTCATAAATGAAGACGCATTCCTGGGGTGGTaGGTATACTATAGAAATATT +
Preference number: 3 (lower is better)
Translates to: AVALAKLRQVIIHFINEDAFLGW*VYYRNI
Trigger: AATATTTCTATAGTATACCAACCACCCCAGGAATGC...GTCTTCATTTATGAAGTGAATTATTACCTGCCTTAGCTTTGCCAAAGCAACGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR GCA 72 bp GTTGTGCTTTTTCCAAGAGTGGCTAACAATGCAATATaGAGCTCTCTCTATGTAAACACACAGTTAGCTTGT +
Preference number: 3 (lower is better)
Translates to: VVLFPRVANNAI*SSLYVNTQLAC
Trigger: ACAAGCTAACTGTGTGTTTACATAGAGAGAGCTGCATATTGCATTGTTAGCCACTCTTGGAAAAAGCACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR TCA 72 bp CTGAAGATACCATCTATTCCATCTAATGTGATCATTTaGGCTGCGTGCTTCATCAACTTAGTATTGCATTGG +
Preference number: 3 (lower is better)
Translates to: LKIPSIPSNVII*AACFINLVLHW
Trigger: CCAATGCAATACTAAGTTGATGAAGCACGCAGCTCAAATGATCACATTAGATGGAATAGATGGTATCTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR GCA 72 bp TTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTaGCATTCATTGCTGTGTATTTGGGTATGGCATTTT +
Preference number: 3 (lower is better)
Translates to: FGVAYALCGLLV*HSLLCIWVWHF
Trigger: AAAATGCCATACCCAAATACACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR CCA 72 bp AATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTaGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTT +
Preference number: 3 (lower is better)
Translates to: NEDNRLSGRLEY*CFTKQSYFLSF
Trigger: AAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR TCA 72 bp TTTCAAGACCAGAGTCAAAGTGAAAGTTATGCATTATaGGGCAAGCATTTTGAGAAGGGAGAAAGGTTGAAA +
Preference number: 3 (lower is better)
Translates to: FQDQSQSESYAL*GKHFEKGERLK
Trigger: TTTCAACCTTTCTCCCTTCTCAAAATGCTTGCCTCATAATGCATAACTTTCACTTTGACTCTGGTCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR GCA 72 bp CTTATGCATTATGTGGATTACTTGTGTGCCATTCATTaGTGTGTATTTGGGTATGGCATTTTGACAACGAAA +
Preference number: 3 (lower is better)
Translates to: LMHYVDYLCAIH*CVFGYGILTTK
Trigger: TTTCGTTGTCAAAATGCCATACCCAAATACACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CACGGACTCGCCCTGGGCGGAGAGGGTCCGCACGGTCACGCCCTTGGCCTCCAGGTGGCTGTGGCAGGATaGGGCTGGGTGAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: HGLALGGEGPHGHALGLQVAVAG*GWVRAT
Trigger: GGTCGCCCTCACCCAGCCGCATCCTGCCACAGCCAC...CTGGAGGCCAAGGGCGTGACCGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp CCATGGCCTTGGCGACGGTGGTGGACACCGGGGTGCCCTGTGGCTGTGGCAGGACTCTCGGCCACCCTCTaGGCGGCCTCCCGGGCCATG +
Preference number: 4 (lower is better)
Translates to: PWPWRRWWTPGCPVAVAGLSATL*AASRAM
Trigger: CATGGCCCGGGAGGCCGCGCAGAGGGTGGCCGAGAG...TCCTGCCACAGCCACAGGGCACCCCGGTGTCCACCACCGTCGCCAAGGCCATGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp GTGGACACCGGGGTGCCCTGTGGCTGTGGCAGGATGCGGCTGGGTGAGGGCGACAGCTGCCCCTGCTGGTaGCGCACTGCACGGAGATGC +
Preference number: 4 (lower is better)
Translates to: VDTGVPCGCGRMRLGEGDSCPCW*RTARRC
Trigger: GCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCT...GTCGCCCTCACCCAGCCGCATCCTGCCACAGCCACAGGGCACCCCGGTGTCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGGGCCACCACCACGGCACGGTCACGCCCTTaGCCTCCAGGCTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: AEICVMLSTRRWEGATTTARSRP*PPGSAA
Trigger: GGCTGCGGAGCCTGGAGGCCAAGGGCGTGACCGTGC...CGTGGTGGTGGCCCCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GTGGACACCGGGGTGCCCTGTGGCTGTGGCAGGATGCGGCTGGGTGAGGGCGACGCTGGGCGTCAGCACTaGTGGCCACCAGCCACGTGT +
Preference number: 4 (lower is better)
Translates to: VDTGVPCGCGRMRLGEGDAGRQH*WPPATC
Trigger: ACACGTGGCTGGTGGCCACCAGTGCTGACGCCCAGC...GTCGCCCTCACCCAGCCGCATCCTGCCACAGCCACAGGGCACCCCGGTGTCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp GTGGACACCGGGGTGCCCTGTGGCTGTGGCAGGATGCGGCTGGGTGAGGGCGACTCCAACTGCAGCTGCTaGCGCCGTTCAGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: VDTGVPCGCGRMRLGEGDSNCSC*RRSAAS
Trigger: AGAGGCGGCTGAACGGCGGCAGCAGCTGCAGTTGGA...GTCGCCCTCACCCAGCCGCATCCTGCCACAGCCACAGGGCACCCCGGTGTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp GTGGACACCGGGGTGCCCTGTGGCTGTGGCAGGATGCGGCTGGGTGAGGGCGACGGGAACGGCAGCAACTaGAGAGTCCACGGACTCGCC +
Preference number: 4 (lower is better)
Translates to: VDTGVPCGCGRMRLGEGDGNGSN*RVHGLA
Trigger: GGCGAGTCCGTGGACTCTGCAGTTGCTGCCGTTCCC...GTCGCCCTCACCCAGCCGCATCCTGCCACAGCCACAGGGCACCCCGGTGTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp GTGGACACCGGGGTGCCCTGTGGCTGTGGCAGGATGCGGCTGGGTGAGGGCGACGCGTGGGGACCCAGGTaGTCGTCTTTGGTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: VDTGVPCGCGRMRLGEGDAWGPR*SSLVSG
Trigger: CCCCGAAACCAAAGACGAGCACCTGGGTCCCCACGC...GTCGCCCTCACCCAGCCGCATCCTGCCACAGCCACAGGGCACCCCGGTGTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GCTCCAGCGGGAGCTGCCACGGCATCTGGTGGGGTTTGGCCAGAACCTTCACCTCGGCCTCCCGGGCCATaGCCTTGGCGACGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: APAGAATASGGVWPEPSPRPPGP*PWRRWW
Trigger: CCACCACCGTCGCCAAGGCCATGGCCCGGGAGGCCG...AGGTGAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCCTTGGCGACGGTGGTaGACACCGGGGTGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GSRQEGGLGGQRLRPVTRPWRRW*TPGCPV
Trigger: CACAGGGCACCCCGGTGTCCACCACCGTCGCCAAGG...CCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CACGGACTCGCCCTGGGCGGAGAGGGTCCGCACGGTCACGCCCTTGGCCTCCAGACACTCAGCCCCAGGTaGCCACATGTCAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: HGLALGGEGPHGHALGLQTLSPR*PHVKGS
Trigger: AGAGCCCTTGACATGTGGCCACCTGGGGCTGAGTGT...CTGGAGGCCAAGGGCGTGACCGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CAA 72 bp GGTAGCCAGGAGAGCTGGGCGGAGATCTGCGTGATGTaGTCCACCCGCAGGTGGGAGGGGGCCACCACCACG +
Preference number: 4 (lower is better)
Translates to: GSQESWAEICVM*STRRWEGATTT
Trigger: CGTGGTGGTGGCCCCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGCCCAGCTCTCCTGGCTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CCATGGCCTTGGCGACGGTGGTGGACACCGGGGTGCCCTGTGGCTGTGGCAGGAGCCTTCACCTTGTCATaGTGCCGGGCCCTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: PWPWRRWWTPGCPVAVAGAFTLS*CRALVG
Trigger: TCCCACAAGGGCCCGGCAGCATGACAAGGTGAAGGC...TCCTGCCACAGCCACAGGGCACCCCGGTGTCCACCACCGTCGCCAAGGCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp GGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGTGCTCCAACTGCAGCTaGTGCCGCCGTTCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: GSRQEGGLGGQRLRPVTRCSNCS*CRRSAA
Trigger: GGCGGCTGAACGGCGGCAGCAGCTGCAGTTGGAGCA...CCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp GCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGGGCCACCACCACGCGCTCTCCTGACCTTTaGCGAGGGAGGTGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: AEICVMLSTRRWEGATTTRSPDL*RGRWLG
Trigger: GCCTAGCCACCTCCCTCGGCAAAGGTCAGGAGAGCG...CGTGGTGGTGGCCCCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCGGGGCCTGTCACCAGGCTaGGGAAGGGGCCGGATATAT +
Preference number: 4 (lower is better)
Translates to: RQEGGLGGQRLRPVTRLRGLSPG*GRGRIY
Trigger: ATATATCCGGCCCCTTCCGCAGCCTGGTGACAGGCC...CCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp GCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGGGCCACCACCACGTGCCCACCAGCAGCGTaGACTGCAGCTCATCCGAGC +
Preference number: 4 (lower is better)
Translates to: AEICVMLSTRRWEGATTTCPPAA*TAAHPS
Trigger: GCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCA...CGTGGTGGTGGCCCCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CCAGGAGAGCTGGGCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGTGGTGGACACCGGGGTaGCCTGTGGCTGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PGELGGDLRDVVHPQVGGWWTPG*PVAVAG
Trigger: TCCTGCCACAGCCACAGGGCACCCCGGTGTCCACCA...CCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGCCCAGCTCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp AGGTGGGAGGGGGCCACCACCACGTCCTTGCCCACCAGCAGCGTGCACTGCAGCAGCTGCCACGGCATCTaGTGGGGTTTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: RWEGATTTSLPTSSVHCSSCHGI*WGLART
Trigger: GGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCT...GCTGCAGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGCCCCCTCCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp AGGTGGGAGGGGGCCACCACCACGTCCTTGCCCACCAGCAGCGTGCACTGCAGCGACGGTAACATCTTGTaGGGGTGCTGGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RWEGATTTSLPTSSVHCSDGNIL*GCWGSC
Trigger: GCAGGACCCCCAGCACCCCCACAAGATGTTACCGTC...GCTGCAGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGCCCCCTCCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CCAGGAGAGCTGGGCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGCAGGCCCAGGACTCATaGCCGCGTCCACTCACGGGA +
Preference number: 4 (lower is better)
Translates to: PGELGGDLRDVVHPQVGGQAQDS*PRPLTG
Trigger: TCCCGTGAGTGGACGCGGCCATGAGTCCTGGGCCTG...CCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGCCCAGCTCTCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647475.1
CDS-3UTR TCA 90 bp CCAGCATGTGCCCATGCACAGGGCCAGGTGCACGGCTCTGCTCCCAGGCCTCATGGGCGGAGATCTGCGTaGTGTTGTCCACCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: PACAHAQGQVHGSAPRPHGRRSA*CCPPAG
Trigger: ACCTGCGGGTGGACAACATCACGCAGATCTCCGCCC...ATGAGGCCTGGGAGCAGAGCCGTGCACCTGGCCCTGTGCATGGGCACATGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp CCAGGAGAGCTGGGCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGGGGCGGAGATCTGCGTaGTGTTGTCCACCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: PGELGGDLRDVVHPQVGGGRRSA*CCPPAG
Trigger: ACCTGCGGGTGGACAACATCACGCAGATCTCCGCCC...CCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGCCCAGCTCTCCTGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp GTTCCCCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAGGCGTCCTCCTCGTCTaGGGCGGCGTACTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: VPQRACQPRLVVLHKVHEGVLLV*GGVLPR
Trigger: GCGGGGCAGTACGCCGCCTCAGACGAGGAGGACGCC...TTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp CAGCTCATCCGAGCTGCCCCTGCTGGTGACGCACTGCACGGAGATGCGGTAGGTTGCTCCAGCGGGAGCTaGCACGGCATCTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: QLIRAAPAGDALHGDAVGCSSGS*HGIWWG
Trigger: ACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGCA...ACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCGGATGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CGCGCTGCCACCCAGCAGGTCAATCTTGCCAGCGTGCTGCCGGAACTTCTCCAGTGCTCCAGCGGGAGCTaGCACGGCATCTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RAATQQVNLASVLPELLQCSSGS*HGIWWG
Trigger: ACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGCA...CTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGTGGCAGCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp TTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCGGAAGGGGCCGGATATATGGCGGCTCCAGCATGTaGCCATGCACAGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LADRGSGLSPGCGRGRIYGGSSM*PCTGPG
Trigger: ACCTGGCCCTGTGCATGGGCACATGCTGGAGCCGCC...ATATATCCGGCCCCTTCCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp GGGGGCCACCACCACGTCCTTGCCCACCAGCAGCGTGCACTGCAGCTCATCCGAGGAGGCCCTCGGAAGTaGAGAGCTGTGTTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: GGHHHVLAHQQRALQLIRGGPRK*RAVFLP
Trigger: CGGCAGAAACACAGCTCTGCACTTCCGAGGGCCTCC...TCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CTCGTTCCCCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACCACCGTTCCCCATCCTaGTGGCACCGCCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LVPQRACQPRLVVLHKVHHRSPS*WHRRGL
Trigger: GAGCCCCCGGCGGTGCCACCAGGATGGGGAACGGTG...GTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp GCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGGGCCACCACCACGAGCTGCCACGGCATCTaGTGGGGTTTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: AEICVMLSTRRWEGATTTSCHGI*WGLART
Trigger: GGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCT...CGTGGTGGTGGCCCCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp ACCCAGCAGGTCAATCTTGCCAGCGTGCTGCCGGAACTTCTCCAGGTCCCGGGATCCAGGAGACCCGGATaGTGGCGGGGGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: TQQVNLASVLPELLQVPGSRRPG*WRGSPQ
Trigger: CTGGGGTGACCCCCGCCACCATCCGGGTCTCCTGGA...TCCCGGGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCGTGACCTGGGTGGTGTaGGGCCTACGGAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: ATGSRQEGGLGGQRLRPVVTWVV*GLRRAM
Trigger: CATTGCCCTCCGTAGGCCCCACACCACCCAGGTCAC...GACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp TTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCGGAAGGGGCCGGATATATGGCTCTGGGGCCACCTaGGGCTGTGGCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: LADRGSGLSPGCGRGRIYGSGAT*GCGCHK
Trigger: CTTATGGCAGCCACAGCCCCAGGTGGCCCCAGAGCC...ATATATCCGGCCCCTTCCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CAA 72 bp CATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTaGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HLALPDLDRKVG*ADRGSGLSPGC
Trigger: GCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp CACGGACTCGCCCTGGGCGGAGAGGGTCCGCACGGTCACGCCCTTGGCCTCCAGCGTCATCGTCAACTGTaGAAGCATGGGACACTTCCT +
Preference number: 4 (lower is better)
Translates to: HGLALGGEGPHGHALGLQRHRQL*KHGTLP
Trigger: AGGAAGTGTCCCATGCTTTCACAGTTGACGATGACG...CTGGAGGCCAAGGGCGTGACCGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp CGCGCTGCCACCCAGCAGGTCAATCTTGCCAGCGTGCTGCCGGAACTTCTCCAGGCAGCCAAGTCCTGGTaGTGTCGGGGAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: RAATQQVNLASVLPELLQAAKSW*CRGGLG
Trigger: TCCAAGGCCTCCCCGACATCACCAGGACTTGGCTGC...CTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGTGGCAGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp CAGCTCATCCGAGCTGCCCCTGCTGGTGACGCACTGCACGGAGATGCGGTAGGTACCAGCAGCGTGCACTaGAGCTCATCCGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QLIRAAPAGDALHGDAVGTSSVH*SSSELP
Trigger: GGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGT...ACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCGGATGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp AGGTGGGAGGGGGCCACCACCACGTCCTTGCCCACCAGCAGCGTGCACTGCAGCCCTTGTGGGAAGGCCTaGATGATGGGATCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RWEGATTTSLPTSSVHCSPCGKA*MMGSQE
Trigger: CTCCTGAGATCCCATCATGCAGGCCTTCCCACAAGG...GCTGCAGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGCCCCCTCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCGTGGGAAAGGCTTGCTaGGGGCCGTGGAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: ATGSRQEGGLGGQRLRPVVGKAC*GPWRCP
Trigger: TGGACATCTCCACGGCCCCCAGCAAGCCTTTCCCAC...GACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp ACGTCCTTGCCCACCAGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGGGGGTCACCCCAGCCTaGACGGTAACATCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: TSLPTSSVHCSSSELPLLGVTPA*TVTSCG
Trigger: CCCACAAGATGTTACCGTCCAGGCTGGGGTGACCCC...CAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAGTTGGTCCACGGACTCGCCCTaGGCGGAGAGGGTCCGCACG +
Preference number: 4 (lower is better)
Translates to: PACLPTATRCPAQSPRSWSTDSP*AERVRT
Trigger: CGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTGGA...CCAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp ACCCAGCAGGTCAATCTTGCCAGCGTGCTGCCGGAACTTCTCCAGGTCCCGGGACAGCGACTGGTGACCTaGGTGGTGTGGGGCCTACGG +
Preference number: 4 (lower is better)
Translates to: TQQVNLASVLPELLQVPGQRLVT*VVWGLR
Trigger: CCGTAGGCCCCACACCACCCAGGTCACCAGTCGCTG...TCCCGGGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp CGAGCTGCCCCTGCTGGTGACGCACTGCACGGAGATGCGGTAGGTGCAGGCTGCGTGGGAAGGCCTGCATaGTGGGATCTCAGGAGATAC +
Preference number: 4 (lower is better)
Translates to: RAAPAGDALHGDAVGAGCVGRPA*WDLRRY
Trigger: GTATCTCCTGAGATCCCATCATGCAGGCCTTCCCAC...GCAGCCTGCACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp GCTCCAGCGGGAGCTGCCACGGCATCTGGTGGGGTTTGGCCAGAACCTTCACCTGTTCCCCAGCGTGCTTaGCAACCGCGACTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: APAGAATASGGVWPEPSPVPQRA*QPRLVV
Trigger: GACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAAC...AGGTGAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp GGTGGTGTGGGGCCTACGGAGGGCAATGGGCCTCTGCCTGAGAATGCTGCGGGACCAGGACGTTGTAGCTaGTCACCGTTCCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: GGVGPTEGNGPLPENAAGPGRCS*SPFPIL
Trigger: CAGGATGGGGAACGGTGAGCAGCTACAACGTCCTGG...TCCCGCAGCATTCTCAGGCAGAGGCCCATTGCCCTCCGTAGGCCCCACACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp ACGTCCTTGCCCACCAGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGCCAGGACGTTGTAGCTaGTCACCGTTCCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: TSLPTSSVHCSSSELPLLPGRCS*SPFPIL
Trigger: CAGGATGGGGAACGGTGAGCAGCTACAACGTCCTGG...CAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCCGCACTGCACGGAGATaGGGTAGGTGCAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HLALPDLDRKVGLADRGSRTARR*GRCRLP
Trigger: TGGCAGCCTGCACCTACCGCATCTCCGTGCAGTGCG...GGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGGTGCTGGGGGTCCTaGAGGCAACGTGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: HLALPDLDRKVGLADRGSGCWGS*RQRGEL
Trigger: GAGTTCTCCACGTTGCCTGCAGGACCCCCAGCACCC...GGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGCGCCCCTGTAGGGCCTaGCGGGCCTGGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTERPCRA*RAWALW
Trigger: CCAGAGAGCCCAGGCCCGGCAGGCCCTACAGGGGCG...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CCA 90 bp ACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCGGAACGGGCAACACAGAGGTaGACCTTCCCCGAGTATCTC +
Preference number: 4 (lower is better)
Translates to: TGRWAWRTEAPACHQAAERATQR*TFPEYL
Trigger: GAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCG...TTCCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp GGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGATGCCCGCATCTATGTaGGTTGGGGAGTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GSRQEGGLGGQRLRPVTRMPASM*VGEWRS
Trigger: GGACCTCCACTCCCCAACCCACATAGATGCGGGCAT...CCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp GCTTGGCCAAACAGACTTCCTCTGCAGTCTCATCAGAAGGAGTGGGAGGCCCTCCACCGTTCCCCATCCTaGTGGCACCGCCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: AWPNRLPLQSHQKEWEALHRSPS*WHRRGL
Trigger: GAGCCCCCGGCGGTGCCACCAGGATGGGGAACGGTG...GAGGGCCTCCCACTCCTTCTGATGAGACTGCAGAGGAAGTCTGTTTGGCCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp ACTCATGGCCGCGTCCACTCACGGGAAAAGCATCGCCAAGCACGCCGGGCAGGGTGCCACGGCATCTGGTaGGGTTTGGCCAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: THGRVHSREKHRQARRAGCHGIW*GLARTF
Trigger: GAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCA...CCCTGCCCGGCGTGCTTGGCGATGCTTTTCCCGTGAGTGGACGCGGCCATGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647475.1
CDS-3UTR CCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTGCACGGTCACGCCCTTaGCCTCCAGGCTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSARSRP*PPGSAA
Trigger: GGCTGCGGAGCCTGGAGGCCAAGGGCGTGACCGTGC...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GCACGATGTCTTCTCCGATGTCGTCGATGTTCACGTCCAGGGTCCCGGCACTGTGGTGCAGGTCTCGGGTaGGGGGTAGGAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: ARCLLRCRRCSRPGSRHCGAGLG*GVGGTR
Trigger: CCTGGTGCCTCCTACCCCCCACCCGAGACCTGCACC...ACAGTGCCGGGACCCTGGACGTGAACATCGACGACATCGGAGAAGACATCGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GCTCCAGCGGGAGCTGCCACGGCATCTGGTGGGGTTTGGCCAGAACCTTCACCTGAAGAACCTCTGGACTaGCTGGGGTCTGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: APAGAATASGGVWPEPSPEEPLD*LGSGPP
Trigger: GGGAGGTCCAGACCCCAGCCAGTCCAGAGGTTCTTC...AGGTGAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp ATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTCCTGGGAAGAACCTCTaGACTGGCTGGGGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: ISTGRWAWRTEAPACHQAPGKNL*TGWGLD
Trigger: GTCCAGACCCCAGCCAGTCCAGAGGTTCTTCCCAGG...AGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTAGGAAGTCCTCCACGTaGGGGACGGCCCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSRKSST*GTAPEP
Trigger: GGGCTCGGGGGCCGTCCCCCACGTGGAGGACTTCCT...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTCTCTCCGGGCCGGGCTaGGGGTCGTCGTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSLSGPG*GSSFLR
Trigger: CCTCAGGAACGACGACCCCCAGCCCGGCCCGGAGAG...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR TCA 90 bp CGCTGCCACCCAGCAGGTCAATCTTGCCAGCGTGCTGCCGGAACTTCTCCAGGTCCAATAGCGCTCTCCTaGCCTTTGCCGAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RCHPAGQSCQRAAGTSPGPIALS*PLPREV
Trigger: CACCTCCCTCGGCAAAGGTCAGGAGAGCGCTATTGG...ACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGTGGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTCAGGATGCGGCTGGGTaGGGGCGACCGCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPQDAAG*GRPPSG
Trigger: CCCGGAAGGCGGTCGCCCTCACCCAGCCGCATCCTG...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp CCATGGCCTTGGCGACGGTGGTGGACACCGGGGTGCCCTGTGGCTGTGGCAGGATGGAGGTTGGTTTTCTaGGGCTTCTGCAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PWPWRRWWTPGCPVAVAGWRLVF*GFCRRS
Trigger: TGACCTTCTGCAGAAGCCTCAGAAAACCAACCTCCA...TCCTGCCACAGCCACAGGGCACCCCGGTGTCCACCACCGTCGCCAAGGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGGGGGGTCGTCGTTCCTaGGGAGGCCACCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTEGGRRS*GGHQGP
Trigger: TGGGCCCTGGTGGCCTCCTCAGGAACGACGACCCCC...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR GCA 90 bp TTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCGGAAGGGGCCGGATATATATCTTGCCAGCGTGCTaGCGGAACTTCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LADRGSGLSPGCGRGRIYILPAC*RNFSRS
Trigger: GGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGAT...ATATATCCGGCCCCTTCCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp GGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGTCAATCTTGCCAGCGTaGTGCCGGAACTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSRQEGGLGGQRLRPVTRSILPA*CRNFSR
Trigger: CCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGA...CCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CGCGCTGCCACCCAGCAGGTCAATCTTGCCAGCGTGCTGCCGGAACTTCTCCAGCCAGCAGGTCAATCTTaGCAGCGTGCTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: RAATQQVNLASVLPELLQPAGQS*QRAAGT
Trigger: AGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGG...CTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGTGGCAGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp GATGTCGTCGATGTTCACGTCCAGGGTCCCGGCACTGTTGTCGGTGATGCCCGCGGCCTGTCACCAGGCTaGGGAAGGGGCCGGATATAT +
Preference number: 4 (lower is better)
Translates to: DVVDVHVQGPGTVVGDARGLSPG*GRGRIY
Trigger: ATATATCCGGCCCCTTCCGCAGCCTGGTGACAGGCC...GCGGGCATCACCGACAACAGTGCCGGGACCCTGGACGTGAACATCGACGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp GGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGGCGGTAGGTGCAGGCTaGCATGTTGAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: GSRQEGGLGGQRLRPVTRAVGAG*HVELLD
Trigger: ATCGAGAAGCTCAACATGGCAGCCTGCACCTACCGC...CCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp ATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGTAGCCGGTAACGTTTaGGCCATTGGACAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: ISTGRWAWRTEAPACHQAVAGNV*AIGQPG
Trigger: ACCGGGCTGTCCAATGGCGCAAACGTTACCGGCTAC...AGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTCTCTCGGCCACCCTCTaGGCGGCCTCCCGGGCCATG +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPLSATL*AASRAM
Trigger: CATGGCCCGGGAGGCCGCGCAGAGGGTGGCCGAGAG...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCTTTTCTCTAACCTGCTaGTCTCGGCCACCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: ATGSRQEGGLGGQRLRPVFSLTC*SRPPSA
Trigger: CGCAGAGGGTGGCCGAGAGCAGCAGGTTAGAGAAAA...GACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp CGTTCCCCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGATCTGAGGCGGCGTACTaGCCCGCGCTGCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: RSPACLPTATRCPAQSPRSEAAY*PALLLS
Trigger: AGAGAGAAGCAGCGCGGGGCAGTACGCCGCCTCAGA...TCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTGCCCCCGAGCCCCTGTaGTTCACCGGGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSAPEPL*FTGNQE
Trigger: CTCCTGGTTCCCGGTGAAGCACAGGGGCTCGGGGGC...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CCA 90 bp CCTCTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGACACCGTTCCCCATCCTaGTGGCACCGCCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PLPGLPEPIDDVGDPEWRHRSPS*WHRRGL
Trigger: GAGCCCCCGGCGGTGCCACCAGGATGGGGAACGGTG...TCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTGGTGCAGGTCTCGGGTaGGGGGTAGGAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSGAGLG*GVGGTR
Trigger: CCTGGTGCCTCCTACCCCCCACCCGAGACCTGCACC...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTGGACACCGGGGTGCCCTGTGGCTGTGGCAGGATGCGGCTGGGTGAGGGCGACGTGATGATTCACTCCTaGATAGGTGAGGAGAACGTG +
Preference number: 4 (lower is better)
Translates to: VDTGVPCGCGRMRLGEGDVMIHS*IGEENV
Trigger: CACGTTCTCCTCACCTATCCAGGAGTGAATCATCAC...GTCGCCCTCACCCAGCCGCATCCTGCCACAGCCACAGGGCACCCCGGTGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GTGGACACCGGGGTGCCCTGTGGCTGTGGCAGGATGCGGCTGGGTGAGGGCGACGCCACCAGCCACGTGTaGCTGTTTACATGTAAACTA +
Preference number: 4 (lower is better)
Translates to: VDTGVPCGCGRMRLGEGDATSHV*LFTCKL
Trigger: TAGTTTACATGTAAACAGCCACACGTGGCTGGTGGC...GTCGCCCTCACCCAGCCGCATCCTGCCACAGCCACAGGGCACCCCGGTGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCCAGCTCTCGAACCTTaGACTGCGTCAGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GSRQEGGLGGQRLRPVTRPALEP*TASEAA
Trigger: TGCAGCTTCTGACGCAGTCCAAGGTTCGAGAGCTGG...CCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647475.1
3UTR CAA 72 bp CGTGGAGAACTCCACAAAGGCCTCCTTCTTCTCCCTTaGCTCCAGCGGGAGCTGCCACGGCATCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RGELHKGLLLLP*LQRELPRHLVG
Trigger: CCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAGGAGGCCTTTGTGGAGTTCTCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp GATGTTCACGTCCAGGGTCCCGGCACTGTTGTCGGTGATGCCCGCATCTATGTGGGTATTTTCCCGCCGTaGGGGGCAGCTCAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: DVHVQGPGTVVGDARIYVGIFPP*GAAQLR
Trigger: CCGAAGCTGAGCTGCCCCTCACGGCGGGAAAATACC...CACATAGATGCGGGCATCACCGACAACAGTGCCGGGACCCTGGACGTGAACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp CGGAAGGGGCCGGATATATTCACCGATCGCAGAGCTGCCTCCAATAGCGCTCTCGGTATTTTCCCGCCGTaGGGGGCAGCTCAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: RKGPDIFTDRRAASNSALGIFPP*GAAQLR
Trigger: CCGAAGCTGAGCTGCCCCTCACGGCGGGAAAATACC...GAGAGCGCTATTGGAGGCAGCTCTGCGATCGGTGAATATATCCGGCCCCTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp CGCTGCCACCCAGCAGGTCAATCTTGCCAGCGTGCTGCCGGAACTTCTCCAGGTTGTACCTGGCGGCCTTaGCGATGTCGAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RCHPAGQSCQRAAGTSPGCTWRP*RCRTPP
Trigger: AGGAGGAGTTCGACATCGTCAAGGCCGCCAGGTACA...ACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGTGGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp TCGATGTTCACGTCCAGGGTCCCGGCACTGTTGTCGGTGATGCCCGCATCTATGTGGCTTGGGAGGAGGTaGGGCTGCAGCCACTTTGCC +
Preference number: 4 (lower is better)
Translates to: SMFTSRVPALLSVMPASMWLGRR*GCSHFA
Trigger: GGCAAAGTGGCTGCAGCCTCACCTCCTCCCAAGCCA...CATAGATGCGGGCATCACCGACAACAGTGCCGGGACCCTGGACGTGAACATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp TGCTTCTCTCTAGGAAGACGCTCCTTTTCTCTAACCTGCTGCTCTCGGCCACCCACCCTCAGCGACTGGTaGCCTGGGTGGTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: CFSLGRRSFSLTCCSRPPTLSDW*PGWCGA
Trigger: GGCCCCACACCACCCAGGTCACCAGTCGCTGAGGGT...GGGTGGCCGAGAGCAGCAGGTTAGAGAAAAGGAGCGTCTTCCTAGAGAGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp GGGGGCCACCACCACGTCCTTGCCCACCAGCAGCGTGCACTGCAGCTCATCCGATTCTTAGCCTCAACCTaGGCCTTCTGCAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: GGHHHVLAHQQRALQLIRFLAST*AFCRRS
Trigger: TGACCTTCTGCAGAAGGCTCAGGTTGAGGCTAAGAA...TCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647475.1
CDS-3UTR GCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTTGCTCCAACTGCAGCTaGTGCCGCCGTTCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSCSNCS*CRRSAA
Trigger: GGCGGCTGAACGGCGGCAGCAGCTGCAGTTGGAGCA...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CGCTGCCACCCAGCAGGTCAATCTTGCCAGCGTGCTGCCGGAACTTCTCCAGGTATCTTGCCAGCGTGCTaGCGGAACTTCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RCHPAGQSCQRAAGTSPGILPAC*RNFSRS
Trigger: GGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGAT...ACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGTGGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp GCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCCGCGACTCGTTGTCCTaGACAAAGTCCACGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ATGSRQEGGLGGQRLRPVRDSLS*TKSTKL
Trigger: CAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCG...GACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp TTGCCGAGGGAGGTGGCTAGGCCATTCATGAACTGTGGGAAAGGCTTGCTGGGGGCTCGTTCCCCAGCGTaGTTGCCAACCGCGACTCGT +
Preference number: 4 (lower is better)
Translates to: LPREVARPFMNCGKGLLGARSPA*LPTATR
Trigger: ACGAGTCGCGGTTGGCAAGCACGCTGGGGAACGAGC...CCCCAGCAAGCCTTTCCCACAGTTCATGAATGGCCTAGCCACCTCCCTCGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAGTTGGAGGGCACCGCTCGTTCCCCAGCGTaGTTGCCAACCGCGACTCGT +
Preference number: 4 (lower is better)
Translates to: LANRDSLSCTKSTKLEGTARSPA*LPTATR
Trigger: ACGAGTCGCGGTTGGCAAGCACGCTGGGGAACGAGC...GGTGCCCTCCAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CGTTCCCCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGATGGAGGTCCAGGATGTaGTCTCCCTCCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: RSPACLPTATRCPAQSPRWRSRM*SPSRPM
Trigger: CATCGGCCTGGAGGGAGAGCACATCCTGGACCTCCA...TCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp GCTCCAGCGGGAGCTGCCACGGCATCTGGTGGGGTTTGGCCAGAACCTTCACCTGCGGTAGGTGCAGGCTaGCATGTTGAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: APAGAATASGGVWPEPSPAVGAG*HVELLD
Trigger: ATCGAGAAGCTCAACATGGCAGCCTGCACCTACCGC...AGGTGAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp GCAGGTCAGAGCAGGCCCAGGACTCATGGCCGCGTCCACTCACGGGAAAAGCATTCCTTCTTCTCCCTTTaGTCCAGCGGGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: AGQSRPRTHGRVHSREKHSFFSL*SSGSCH
Trigger: GTGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAGGA...ATGCTTTTCCCGTGAGTGGACGCGGCCATGAGTCCTGGGCCTGCTCTGACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647475.1
CDS-3UTR GCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGGTGGCTGTGGCAGGATaGGGCTGGGTGAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTEVAVAG*GWVRAT
Trigger: GGTCGCCCTCACCCAGCCGCATCCTGCCACAGCCAC...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTTGGTGGACACCGGGGTaGCCTGTGGCTGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSWWTPG*PVAVAG
Trigger: TCCTGCCACAGCCACAGGGCACCCCGGTGTCCACCA...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAGCTCATCCGAGCTGCCCCTGCTGGTGACGCACTGCACGGAGATGCGGTAGGTCGCACTGCGCCTTCATaGTCCTTCTTAGCCTCAACC +
Preference number: 4 (lower is better)
Translates to: QLIRAAPAGDALHGDAVGRTAPS*SFLAST
Trigger: GGTTGAGGCTAAGAAGGAGCATGAAGGCGCAGTGCG...ACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCGGATGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp GCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGGGCCACCACCACGACGAGGGTGAGCGGATaGTTGAGATGCACATACTCT +
Preference number: 4 (lower is better)
Translates to: AEICVMLSTRRWEGATTTTRVSG*LRCTYS
Trigger: AGAGTATGTGCATCTCAACCATCCGCTCACCCTCGT...CGTGGTGGTGGCCCCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CGCGCTGCCACCCAGCAGGTCAATCTTGCCAGCGTGCTGCCGGAACTTCTCCAGGGCTGTAGTTGCTGTTaGTGGGTAGCCAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RAATQQVNLASVLPELLQGCSCC*WVARRA
Trigger: AGCTCTCCTGGCTACCCACCAACAGCAACTACAGCC...CTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGTGGCAGCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp CGAGCTGCCCCTGCTGGTGACGCACTGCACGGAGATGCGGTAGGTGCAGGCTGCCTGAGATTGAAGAACTaGTACTTGTACCTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RAAPAGDALHGDAVGAGCLRLKN*YLYLAA
Trigger: GGCCGCCAGGTACAAGTACCAGTTCTTCAATCTCAG...GCAGCCTGCACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp CAGCTCATCCGAGCTGCCCCTGCTGGTGACGCACTGCACGGAGATGCGGTAGGTGTCCTGCAGGCAACGTaGAGAACTCCACAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: QLIRAAPAGDALHGDAVGVLQAT*RTPQRP
Trigger: AGGCCTTTGTGGAGTTCTCCACGTTGCCTGCAGGAC...ACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCGGATGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAGTTGGAGGGCACCGGGCGTCAGCACAGGTaGTCTCCAGGAGACCCGGAT +
Preference number: 4 (lower is better)
Translates to: LANRDSLSCTKSTKLEGTGRQHR*SPGDPD
Trigger: ATCCGGGTCTCCTGGAGACCACCTGTGCTGACGCCC...GGTGCCCTCCAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GTTCCCCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAACATTGGACAGCCCGGTaGGCGTCAGCACAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: VPQRACQPRLVVLHKVHEHWTAR*ASAQVV
Trigger: GACCACCTGTGCTGACGCCCACCGGGCTGTCCAATG...TTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CCTCTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGAGGTGCAGGTCTCGGGTaGGGGGTAGGAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: PLPGLPEPIDDVGDPEWRGAGLG*GVGGTR
Trigger: CCTGGTGCCTCCTACCCCCCACCCGAGACCTGCACC...TCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGTGGCCTTGGCGACGGTaGTGGACACCGGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTEWPWRR*WTPGCP
Trigger: AGGGCACCCCGGTGTCCACCACCGTCGCCAAGGCCA...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTGGTATTTTCCCGCCGTaGGGGGCAGCTCAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSGIFPP*GAAQLR
Trigger: CCGAAGCTGAGCTGCCCCTCACGGCGGGAAAATACC...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GGCCAGAACCTTCACCTTATAGGCCATGTTGGGCCTGAGATTGAAGAACTGGTACAGGATGCGGCTGGGTaGGGGCGACCGCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GQNLHLIGHVGPEIEELVQDAAG*GRPPSG
Trigger: CCCGGAAGGCGGTCGCCCTCACCCAGCCGCATCCTG...TACCAGTTCTTCAATCTCAGGCCCAACATGGCCTATAAGGTGAAGGTTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp GAGAGGGAAGCCCCTTTCTATTGGACTTTGGCTTGGGAGGAGGTGAGGCTGCAGGCCAGGGCCTGGTCATaGTCCAACTGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EREAPFYWTLAWEEVRLQARAWS*SNCSCC
Trigger: GCAGCAGCTGCAGTTGGAGCATGACCAGGCCCTGGC...CTGCAGCCTCACCTCCTCCCAAGCCAAAGTCCAATAGAAAGGGGCTTCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp CCATGGCCTTGGCGACGGTGGTGGACACCGGGGTGCCCTGTGGCTGTGGCAGGAAGAAGGTCAATTTCCTaGTGCTTGGCACTGAGAACA +
Preference number: 4 (lower is better)
Translates to: PWPWRRWWTPGCPVAVAGRRSIS*CLALRT
Trigger: TGTTCTCAGTGCCAAGCAGCAGGAAATTGACCTTCT...TCCTGCCACAGCCACAGGGCACCCCGGTGTCCACCACCGTCGCCAAGGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp CGTTCCCCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAACTGTGGGAAAGGCTTaGTGGGGGCCGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: RSPACLPTATRCPAQSPRTVGKA*WGPWRC
Trigger: ACATCTCCACGGCCCCCAGCAAGCCTTTCCCACAGT...TCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp GCTCCCCAGCGTGAGGTTCATGCGTGTCTCCTTGTCCACCAGGACGTTGTAGCTTGGAGGTCCAGGATGTaGTCTCCCTCCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: APQREVHACLLVHQDVVAWRSRM*SPSRPM
Trigger: CATCGGCCTGGAGGGAGAGCACATCCTGGACCTCCA...AGCTACAACGTCCTGGTGGACAAGGAGACACGCATGAACCTCACGCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp GCGGGAGCTGCCACGGCATCTGGTGGGGTTTGGCCAGAACCTTCACCTTATAGGTCCTTCTTCTCCCTTTaGTCCAGCGGGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: AGAATASGGVWPEPSPYRSFFSL*SSGSCH
Trigger: GTGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAGGA...CCTATAAGGTGAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTGGGTGCTGGGGGTCCTaGAGGCAACGTGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSGCWGS*RQRGEL
Trigger: GAGTTCTCCACGTTGCCTGCAGGACCCCCAGCACCC...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTGGGAACGGCAGCAACTaGAGAGTCCACGGACTCGCC +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSGNGSN*RVHGLA
Trigger: GGCGAGTCCGTGGACTCTGCAGTTGCTGCCGTTCCC...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGTGGCTGTGGCAGGATaGGGCTGGGTGAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: GLPEPIDDVGDPEWRWTVVAVAG*GWVRAT
Trigger: GGTCGCCCTCACCCAGCCGCATCCTGCCACAGCCAC...CACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp GGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGCATTGTGGGACGTaGCGCTGGGCCGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLPEPIDDVGDPEWRWTVGHCGT*RWAASF
Trigger: GAAGGAGGCGGCCCAGCGGCACGTCCCACAATGCCC...CACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp GGGCACCAGACCCCTCTGGCCATCGAGGAGCTCTCCTTCATAGAACCCATCCTCCACCCAGAGAACAAGTaGTCCAGCCTTTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GHQTPLAIEELSFIEPILHPENK*SSLSSG
Trigger: CCCGGAGGAAAGGCTGGAGCACTTGTTCTCTGGGTG...GAGGATGGGTTCTATGAAGGAGAGCTCCTCGATGGCCAGAGGGGTCTGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTGACGGCCCTGCACCCTaGTTGTGTAGCAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSDGPAP*LCSSPQ
Trigger: CTGTGGGCTGCTACACAAGCAGGGTGCAGGGCCGTC...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CCA 90 bp AGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGGTGACGCACTGCACGTTCTCCAGCTTGGCTTaGAGCTGGTGTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSVHCSSSELPLLVTHCTFSSLA*SWCFSF
Trigger: GAAGGAGAAACACCAGCTCCAAGCCAAGCTGGAGAA...CGTGCAGTGCGTCACCAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp AGGTGGGAGGGGGCCACCACCACGTCCTTGCCCACCAGCAGCGTGCACTGCAGCCCGAGTATCTCTGCTTaGAGGTATTGGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: RWEGATTTSLPTSSVHCSPSISA*RYWNSV
Trigger: AACGGAATTCCAATACCTCCAAGCAGAGATACTCGG...GCTGCAGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGCCCCCTCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp GTACCTGGCGGCCTTGACGATGTCGAACTCCTCCTCGTTGAGGAAGATGACGTGGGCACCAGACCCCTCTaGCCATCGAGGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VPGGLDDVELLLVEEDDVGTRPL*PSRSSP
Trigger: AGGAGAGCTCCTCGATGGCCAGAGGGGTCTGGTGCC...CACGTCATCTTCCTCAACGAGGAGGAGTTCGACATCGTCAAGGCCGCCAGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp CAGATCTGCATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAGGTAGCCAGGAGAGCTaGGCGGAGATCTGCGTGATG +
Preference number: 4 (lower is better)
Translates to: QICILRYRISTGRWAWRTGSQES*AEICVM
Trigger: CATCACGCAGATCTCCGCCCAGCTCTCCTGGCTACC...TGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCAGATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp TCCTTGCCCACCAGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGGTGCTGAGATTGAAGAACTaGTACTTGTACCTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SLPTSSVHCSSSELPLLVLRLKN*YLYLAA
Trigger: GGCCGCCAGGTACAAGTACCAGTTCTTCAATCTCAG...CACCAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp GTTCCCCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAATCTTGTGGGGGTGCTaGGGGTCCTGCAGGCAACGT +
Preference number: 4 (lower is better)
Translates to: VPQRACQPRLVVLHKVHEILWGC*GSCRQR
Trigger: ACGTTGCCTGCAGGACCCCCAGCACCCCCACAAGAT...TTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GATGTCGTCGATGTTCACGTCCAGGGTCCCGGCACTGTTGTCGGTGATGCCCGCGCTAATGGCTTTGATTaGGGTGCAGGTCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: DVVDVHVQGPGTVVGDARANGFD*GAGLGW
Trigger: CCACCCGAGACCTGCACCCCAATCAAAGCCATTAGC...GCGGGCATCACCGACAACAGTGCCGGGACCCTGGACGTGAACATCGACGACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GCTTGGCCAAACAGACTTCCTCTGCAGTCTCATCAGAAGGAGTGGGAGGCCCTCAGGCCTCATCCATCCTaGCGTGGGGACCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: AWPNRLPLQSHQKEWEALRPHPS*RGDPGA
Trigger: AGCACCTGGGTCCCCACGCCAGGATGGATGAGGCCT...GAGGGCCTCCCACTCCTTCTGATGAGACTGCAGAGGAAGTCTGTTTGGCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGCACCGGGGTGCCCTGTaGCTGTGGCAGGATGCGGCT +
Preference number: 4 (lower is better)
Translates to: GLPEPIDDVGDPEWRWTVHRGAL*LWQDAA
Trigger: AGCCGCATCCTGCCACAGCCACAGGGCACCCCGGTG...CACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp AAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTTCAGAGCCAACCCCGGGCCATGGCCTTaGCGACGGTGGTGGACACCG +
Preference number: 4 (lower is better)
Translates to: KENTFWPLEPVFGVFRANPGPWP*RRWWTP
Trigger: CGGTGTCCACCACCGTCGCCAAGGCCATGGCCCGGG...GTTGGCTCTGAACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp ATATTCACCGATCGCAGAGCTGCCTCCAATAGCGCTCTCCTGACCTTTGCCGAGGGACTGGCTGGGGTCTaGACCTCCCCTGTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: IFTDRRAASNSALLTFAEGLAGV*TSPVPS
Trigger: GCTTGGCACAGGGGAGGTCCAGACCCCAGCCAGTCC...CTCGGCAAAGGTCAGGAGAGCGCTATTGGAGGCAGCTCTGCGATCGGTGAATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTTTCCTGTGGGGCTGGTaGGGAAACTCGGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSFLWGW*GNSGCS
Trigger: GGAGCAGCCCGAGTTTCCCCACCAGCCCCACAGGAA...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
3UTR CAA 72 bp CCTGAGAATGCTGCGGGAGAGGGAAGCCCCTTTCTATaGGACTTTGGCTTGGGAGGAGGTGAGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PENAAGEGSPFL*DFGLGGGEAAA
Trigger: GGCTGCAGCCTCACCTCCTCCCAAGCCAAAGTCCAATAGAAAGGGGCTTCCCTCTCCCGCAGCATTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CAA 72 bp ATGTCGTCGATGTTCACGTCCAGGGTCCCGGCACTGTaGTCGGTGATGCCCGCATCTATGTGGGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: MSSMFTSRVPAL*SVMPASMWVGE
Trigger: CTCCCCAACCCACATAGATGCGGGCATCACCGACAACAGTGCCGGGACCCTGGACGTGAACATCGACGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp AACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCTCTGCTTGGAGGCCTGCTGCTTGGCACTaGGAACAGCCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: NYSGQHRGGPSPSISAWRPAAWH*EQPGPG
Trigger: ACCAGGCCCTGGCTGTTCTCAGTGCCAAGCAGCAGG...CCTCCAAGCAGAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp TGCCATGTTGAGCTTCTCGATGAGGGCTTTAGTTCTGCTCCCCAGCGTGAGGTTAGCTGCCCCTGCTGGTaGCGCACTGCACGGAGATGC +
Preference number: 4 (lower is better)
Translates to: CHVELLDEGFSSAPQREVSCPCW*RTARRC
Trigger: GCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCT...AACCTCACGCTGGGGAGCAGAACTAAAGCCCTCATCGAGAAGCTCAACATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp GCACGATGTCTTCTCCGATGTCGTCGATGTTCACGTCCAGGGTCCCGGCACTGTTGTACCTGGCGGCCTTaGCGATGTCGAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ARCLLRCRRCSRPGSRHCCTWRP*RCRTPP
Trigger: AGGAGGAGTTCGACATCGTCAAGGCCGCCAGGTACA...ACAGTGCCGGGACCCTGGACGTGAACATCGACGACATCGGAGAAGACATCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp GCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGGGCCACCACCACGGGATCTAGCCATGTCTaGAGCCACATTTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: AEICVMLSTRRWEGATTTGSSHV*SHIFSD
Trigger: ATCACTGAAAATGTGGCTTCAGACATGGCTAGATCC...CGTGGTGGTGGCCCCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp GCTCCAGCGGGAGCTGCCACGGCATCTGGTGGGGTTTGGCCAGAACCTTCACCTTCCGGGTTTGTAATCTaGGCAGATTGCAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: APAGAATASGGVWPEPSPSGFVI*ADCREG
Trigger: ACCTTCCCTGCAATCTGCTCAGATTACAAACCCGGA...AGGTGAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTGGTCAGTGCAGTCCTTaGGGGCATTGTGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSGQCSP*GHCGTC
Trigger: GCACGTCCCACAATGCCCTCAAGGACTGCACTGACC...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR GCA 90 bp CATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCCTCAGATCTGCATCTTaGGCTACCGGATCTCGACAG +
Preference number: 4 (lower is better)
Translates to: HLALPDLDRKVGLADRGSLRSAS*ATGSRQ
Trigger: CTGTCGAGATCCGGTAGCGCAAGATGCAGATCTGAG...GGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp TCCCTCCAGGCCGATGCCGGAATGGTTGATGAAGTTCTGATCCTGCTCGTTCCCGTTCCCCAGCGTGCTTaGCAACCGCGACTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: SLQADAGMVDEVLILLVPVPQRA*QPRLVV
Trigger: GACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAAC...GGGAACGAGCAGGATCAGAACTTCATCAACCATTCCGGCATCGGCCTGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGTGCCCACCAGCAGCGTaGACTGCAGCTCATCCGAGC +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTECPPAA*TAAHPS
Trigger: GCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCA...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CCTCTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGACCACCACCACGTCCTTaGCCACCAGCAGCGTGCACT +
Preference number: 4 (lower is better)
Translates to: PLPGLPEPIDDVGDPEWRPPPRP*PPAACT
Trigger: AGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGG...TCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp GCTCCCCAGCGTGAGGTTCATGCGTGTCTCCTTGTCCACCAGGACGTTGTAGCTAGAACAGCCAGGGCCTaGTCATGCTCCAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: APQREVHACLLVHQDVVARTARA*SCSNCS
Trigger: GCTGCAGTTGGAGCATGACCAGGCCCTGGCTGTTCT...AGCTACAACGTCCTGGTGGACAAGGAGACACGCATGAACCTCACGCTGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GAGAGGGAAGCCCCTTTCTATTGGACTTTGGCTTGGGAGGAGGTGAGGCTGCAGTCATCCATCCTGGCGTaGGGACCCAGGTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: EREAPFYWTLAWEEVRLQSSILA*GPRCSS
Trigger: AGACGAGCACCTGGGTCCCCACGCCAGGATGGATGA...CTGCAGCCTCACCTCCTCCCAAGCCAAAGTCCAATAGAAAGGGGCTTCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGATGGAAGGCCTCATCCATCCTaGCGTGGGGACCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: EPIDDVGDPEWRWTVGDGRPHPS*RGDPGA
Trigger: AGCACCTGGGTCCCCACGCCAGGATGGATGAGGCCT...TCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTGCCCGTAATCGTCGATaGATGGGACTGTCACGGGCC +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSARNRR*MGLSRA
Trigger: GGCCCGTGACAGTCCCATCCATCGACGATTACGGGC...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CAGCTCATCCGAGCTGCCCCTGCTGGTGACGCACTGCACGGAGATGCGGTAGGTGAAGCCCCTTTCTATTaGACTTTGGCTTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QLIRAAPAGDALHGDAVGEAPFY*TLAWEE
Trigger: CTCCTCCCAAGCCAAAGTCCAATAGAAAGGGGCTTC...ACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCGGATGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp CGAAGGGGTTGTAACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCCGGCACTGTTGTCGGTaGTGCCCGCATCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: RRGCNYSGQHRGGPSPSIRHCCR*CPHLCG
Trigger: CCCACATAGATGCGGGCATCACCGACAACAGTGCCG...GATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTTACAACCCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp GGAATGGTTGATGAAGTTCTGATCCTGCTCGTTCCCCAGCGTGCTTGCCAACCGCGGCACTGTTGTCGGTaGTGCCCGCATCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: GMVDEVLILLVPQRACQPRHCCR*CPHLCG
Trigger: CCCACATAGATGCGGGCATCACCGACAACAGTGCCG...CGGTTGGCAAGCACGCTGGGGAACGAGCAGGATCAGAACTTCATCAACCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTTTCTGCTCCCCAGCGTaGGGTTCATGCGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSFCSPA*GSCVSP
Trigger: AGGAGACACGCATGAACCTCACGCTGGGGAGCAGAA...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTGGGCGGAGATCTGCGTaGTGTTGTCCACCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPGRRSA*CCPPAG
Trigger: ACCTGCGGGTGGACAACATCACGCAGATCTCCGCCC...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTTTCACCTTGTCATGCTaGCGGGCCCTTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSFTLSC*RALVGR
Trigger: CCTTCCCACAAGGGCCCGGCAGCATGACAAGGTGAA...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTATCTTGCCAGCGTGCTaGCGGAACTTCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSILPAC*RNFSRS
Trigger: GGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGAT...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TCCCTCCAGGCCGATGCCGGAATGGTTGATGAAGTTCTGATCCTGCTCGTTCCCCCAGCAGGTCAATCTTaGCAGCGTGCTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: SLQADAGMVDEVLILLVPPAGQS*QRAAGT
Trigger: AGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGG...GGGAACGAGCAGGATCAGAACTTCATCAACCATTCCGGCATCGGCCTGGAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTCGCTCTCCTGACCTTTaGCGAGGGAGGTGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPRSPDL*RGRWLG
Trigger: GCCTAGCCACCTCCCTCGGCAAAGGTCAGGAGAGCG...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TCCTTGCCCACCAGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGGTGTTCCCCGAGTATCTCTaGTTGGAGGTATTGGAATTC +
Preference number: 4 (lower is better)
Translates to: SLPTSSVHCSSSELPLLVFPEYL*LEVLEF
Trigger: GAATTCCAATACCTCCAAGCAGAGATACTCGGGGAA...CACCAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp TGGGTCCTTCACCCAGAGAACAAGTGCTCCAGCCTTTCCTCCGGGTTTGTAATCTGCCCACCAGCAGCGTaGACTGCAGCTCATCCGAGC +
Preference number: 4 (lower is better)
Translates to: WVLHPENKCSSLSSGFVICPPAA*TAAHPS
Trigger: GCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCA...GATTACAAACCCGGAGGAAAGGCTGGAGCACTTGTTCTCTGGGTGAAGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp TGCCATGTTGAGCTTCTCGATGAGGGCTTTAGTTCTGCTCCCCAGCGTGAGGTTCCACCACCACGTCCTTaGCCACCAGCAGCGTGCACT +
Preference number: 4 (lower is better)
Translates to: CHVELLDEGFSSAPQREVPPPRP*PPAACT
Trigger: AGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGG...AACCTCACGCTGGGGAGCAGAACTAAAGCCCTCATCGAGAAGCTCAACATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp GGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGTGCTGGGGGTCCTaGAGGCAACGTGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: GLPEPIDDVGDPEWRWTVGCWGS*RQRGEL
Trigger: GAGTTCTCCACGTTGCCTGCAGGACCCCCAGCACCC...CACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp GCTTGGCCAAACAGACTTCCTCTGCAGTCTCATCAGAAGGAGTGGGAGGCCCTCAACATCTTGTGGGGGTaGTGGGGGTCCTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: AWPNRLPLQSHQKEWEALNILWG*WGSCRQ
Trigger: TTGCCTGCAGGACCCCCAGCACCCCCACAAGATGTT...GAGGGCCTCCCACTCCTTCTGATGAGACTGCAGAGGAAGTCTGTTTGGCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp ATATTCACCGATCGCAGAGCTGCCTCCAATAGCGCTCTCCTGACCTTTGCCGAGCGTACTGCCCCGCGCTaGTTCTCTCTAGGAAGACGC +
Preference number: 4 (lower is better)
Translates to: IFTDRRAASNSALLTFAERTAPR*FSLGRR
Trigger: GCGTCTTCCTAGAGAGAAGCAGCGCGGGGCAGTACG...CTCGGCAAAGGTCAGGAGAGCGCTATTGGAGGCAGCTCTGCGATCGGTGAATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTTCTGAGGCGGCGTACTaGCCCGCGCTGCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPSEAAY*PALLLS
Trigger: AGAGAGAAGCAGCGCGGGGCAGTACGCCGCCTCAGA...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAGATCTGCATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACACGCACTGCGCCTTCATaGTCCTTCTTAGCCTCAACC +
Preference number: 4 (lower is better)
Translates to: QICILRYRISTGRWAWRTRTAPS*SFLAST
Trigger: GGTTGAGGCTAAGAAGGAGCATGAAGGCGCAGTGCG...TGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCAGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTAATCAGGGGGCCTTGTaGGACTCTGGGAGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSNQGAL*DSGRWL
Trigger: AAGCCACCTCCCAGAGTCGCACAAGGCCCCCTGATT...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CCA 90 bp ACCAGTGGGGGTATGGGTCCTTCACCCAGAGAACAAGTGCTCCAGCCTTTCCTCATCTCGACAGGAAGGTaGGCTTGGCGGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TSGGMGPSPREQVLQPFLISTGR*AWRTEA
Trigger: AGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGAT...GAGGAAAGGCTGGAGCACTTGTTCTCTGGGTGAAGGACCCATACCCCCACTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAGTTGGATGTGGGTTGGGGAGTaGAGGTCCAGGATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PACLPTATRCPAQSPRSWMWVGE*RSRMCS
Trigger: AGAGCACATCCTGGACCTCCACTCCCCAACCCACAT...CCAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp CAGGGTTACTTAAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTTCCAGGAGACCCGGATaGTGGCGGGGGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: QGYLRKTRSGHSSQCLECSRRPG*WRGSPQ
Trigger: CTGGGGTGACCCCCGCCACCATCCGGGTCTCCTGGA...ACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAAGTAACCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAGTTGGAGGGCACCCCAGGTGCTCGTCTTTaGTTTCGGGGACTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LANRDSLSCTKSTKLEGTPGARL*FRGLQN
Trigger: GTTCTGGAGTCCCCGAAACCAAAGACGAGCACCTGG...GGTGCCCTCCAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GGCCAGAACCTTCACCTTATAGGCCATGTTGGGCCTGAGATTGAAGAACTGGTACACCGGGGTGCCCTGTaGCTGTGGCAGGATGCGGCT +
Preference number: 4 (lower is better)
Translates to: GQNLHLIGHVGPEIEELVHRGAL*LWQDAA
Trigger: AGCCGCATCCTGCCACAGCCACAGGGCACCCCGGTG...TACCAGTTCTTCAATCTCAGGCCCAACATGGCCTATAAGGTGAAGGTTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTCGGCCTCCCGGGCCATaGCCTTGGCGACGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLRPPGP*PWRRWW
Trigger: CCACCACCGTCGCCAAGGCCATGGCCCGGGAGGCCG...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CGTTCCCCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGACCTCCTCTTGAAGTCTaGAGAGTCATAGGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: RSPACLPTATRCPAQSPRPPLEV*RVIGVL
Trigger: GAGGACGCCTATGACTCTCCAGACTTCAAGAGGAGG...TCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTCCTCGACATCGACGTTaGGCGAGCTTTCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSPRHRR*ASFLWG
Trigger: ACCCCAGAGAAAGCTCGCCCAACGTCGATGTCGAGG...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GGGCACCAGACCCCTCTGGCCATCGAGGAGCTCTCCTTCATAGAACCCATCCTCGCGGACACTGGAGGTTaGTTTTCTGAGGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GHQTPLAIEELSFIEPILADTGG*FSEASA
Trigger: TGCAGAAGCCTCAGAAAACCAACCTCCAGTGTCCGC...GAGGATGGGTTCTATGAAGGAGAGCTCCTCGATGGCCAGAGGGGTCTGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CGAAGGGGTTGTAACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCAACCTCTGGACTGGCTaGGGTCTGGACCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: RRGCNYSGQHRGGPSPSINLWTG*GLDLPC
Trigger: ACAGGGGAGGTCCAGACCCCAGCCAGTCCAGAGGTT...GATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTTACAACCCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GCTTGGCCAAACAGACTTCCTCTGCAGTCTCATCAGAAGGAGTGGGAGGCCCTCCAGGAGCTCCTCTCCTaGGAAGAACCTCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: AWPNRLPLQSHQKEWEALQELLS*EEPLDW
Trigger: CCAGTCCAGAGGTTCTTCCCAGGAGAGGAGCTCCTG...GAGGGCCTCCCACTCCTTCTGATGAGACTGCAGAGGAAGTCTGTTTGGCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GGCGTGGAAACAGGTCTTCTTCAGGCCTCGGTTCAATCTAATTCCAGCTCTGTTGGGCGTCAGCACTGGTaGCCACCAGCCACGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GVETGLLQASVQSNSSSVGRQHW*PPATCG
Trigger: GCCACACGTGGCTGGTGGCCACCAGTGCTGACGCCC...AACAGAGCTGGAATTAGATTGAACCGAGGCCTGAAGAAGACCTGTTTCCACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp CGAAGGGGTTGTAACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCCCCGGGACAGCAGGTTaGACTGCTCACTTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: RRGCNYSGQHRGGPSPSIPGTAG*TAHFES
Trigger: GGACTCAAAGTGAGCAGTTCAACCTGCTGTCCCGGG...GATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTTACAACCCCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTCCAATAGCGCTCTCCTaGCCTTTGCCGAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPPIALS*PLPREV
Trigger: CACCTCCCTCGGCAAAGGTCAGGAGAGCGCTATTGG...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GCTCCCCAGCGTGAGGTTCATGCGTGTCTCCTTGTCCACCAGGACGTTGTAGCTTGGTTGATGAAGTTCTaGTCCTGCTCGTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: APQREVHACLLVHQDVVAWLMKF*SCSFPS
Trigger: GCTGGGGAACGAGCAGGATCAGAACTTCATCAACCA...AGCTACAACGTCCTGGTGGACAAGGAGACACGCATGAACCTCACGCTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp GGAATGGTTGATGAAGTTCTGATCCTGCTCGTTCCCCAGCGTGCTTGCCAACCGTTCTGCTCCCCAGCGTaGGGTTCATGCGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GMVDEVLILLVPQRACQPFCSPA*GSCVSP
Trigger: AGGAGACACGCATGAACCTCACGCTGGGGAGCAGAA...CGGTTGGCAAGCACGCTGGGGAACGAGCAGGATCAGAACTTCATCAACCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp CGAAGGGGTTGTAACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCAGGCGCCCCTCCTCTTaGAGTCTGGAGAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: RRGCNYSGQHRGGPSPSIRRPSS*SLESHR
Trigger: CCTATGACTCTCCAGACTTCAAGAGGAGGGGCGCCT...GATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTTACAACCCCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGGGTGGCCGAGCGGCTaGACCGACAGCCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVGWPSG*TDSPCL
Trigger: AAGACAGGGGCTGTCGGTTCAGCCGCTCGGCCACCC...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR GCA 90 bp CTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGATCTTGCCAGCGTGCTaGCGGAACTTCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LPEPIDDVGDPEWRWTVGILPAC*RNFSRS
Trigger: GGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGAT...CCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CGAACCTTGGACTCTAGCAGCCGCACTGCGCCTTCATGCTCCTTCTTAGCCTCATCAATCTTGCCAGCGTaGTGCCGGAACTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RTLDSSSRTAPSCSFLASSILPA*CRNFSR
Trigger: CCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGA...TGAGGCTAAGAAGGAGCATGAAGGCGCAGTGCGGCTGCTAGAGTCCAAGGTTCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGATGGAACTGTGGGAAAGGCTTaGTGGGGGCCGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: EPIDDVGDPEWRWTVGDGTVGKA*WGPWRC
Trigger: ACATCTCCACGGCCCCCAGCAAGCCTTTCCCACAGT...TCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp TCGATGTTCACGTCCAGGGTCCCGGCACTGTTGTCGGTGATGCCCGCATCTATGCGCGACTCGTTGTCCTaGACAAAGTCCACGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SMFTSRVPALLSVMPASMRDSLS*TKSTKL
Trigger: CAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCG...CATAGATGCGGGCATCACCGACAACAGTGCCGGGACCCTGGACGTGAACATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTTGGAGGTCCAGGATGTaGTCTCCCTCCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPWRSRM*SPSRPM
Trigger: CATCGGCCTGGAGGGAGAGCACATCCTGGACCTCCA...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGCCAGGACGTTGTAGCTaGTCACCGTTCCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTEPGRCS*SPFPIL
Trigger: CAGGATGGGGAACGGTGAGCAGCTACAACGTCCTGG...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp AAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTTCAGAGCCAACCGCACTGCACGGAGATaGGGTAGGTGCAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KENTFWPLEPVFGVFRANRTARR*GRCRLP
Trigger: TGGCAGCCTGCACCTACCGCATCTCCGTGCAGTGCG...GTTGGCTCTGAACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp TCCGTTCATTCTCCATGTCTGACTCAGATCTGCATCTTGCGCTACCGGATCTCGCGCACTGCACGGAGATaGGGTAGGTGCAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SVHSPCLTQICILRYRISRTARR*GRCRLP
Trigger: TGGCAGCCTGCACCTACCGCATCTCCGTGCAGTGCG...CGAGATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACATGGAGAATGAACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CTTCTCTCTAGGAAGACGCTCCTTTTCTCTAACCTGCTGCTCTCGGCCACCCTCACTTCAGCCACCCTCTaGCCTTTGGCATACACGCCG +
Preference number: 4 (lower is better)
Translates to: LLSRKTLLFSNLLLSATLTSATL*PLAYTP
Trigger: CGGCGTGTATGCCAAAGGGCAGAGGGTGGCTGAAGT...GAGGGTGGCCGAGAGCAGCAGGTTAGAGAAAAGGAGCGTCTTCCTAGAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp AAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTTCAGAGCCAACTCCAGCATGTGCCCATaGACAGGGCCAGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: KENTFWPLEPVFGVFRANSSMCP*TGPGAR
Trigger: CCGTGCACCTGGCCCTGTGCATGGGCACATGCTGGA...GTTGGCTCTGAACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGATGGAGGGAAGCTCCTCCTCTaGAGCATCTGGGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: EPIDDVGDPEWRWTVGDGGKLLL*SIWVWG
Trigger: TCCCCAAACCCAGATGCTGCAGAGGAGGAGCTTCCC...TCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp GCTGAATGCCGATCTCAAAAACCAGTGGGGGTATGGGTCCTTCACCCAGAGAACAGGGCAATGGGCCTCTaGCTGAGAATGCTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: AECRSQKPVGVWVLHPENRAMGL*LRMLRE
Trigger: CTCCCGCAGCATTCTCAGGCAGAGGCCCATTGCCCT...GTTCTCTGGGTGAAGGACCCATACCCCCACTGGTTTTTGAGATCGGCATTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTGCCTCGGGCCCCTCCTaGAGGGACAGTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVASGPS*RDSDQG
Trigger: GCCCTGGTCACTGTCCCTGCAGGAGGGGCCCGAGGC...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CCA 90 bp TGGGTCCTTCACCCAGAGAACAAGTGCTCCAGCCTTTCCTCCGGGTTTGTAATCGTGGGAAAGGCTTGCTaGGGGCCGTGGAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: WVLHPENKCSSLSSGFVIVGKAC*GPWRCP
Trigger: TGGACATCTCCACGGCCCCCAGCAAGCCTTTCCCAC...GATTACAAACCCGGAGGAAAGGCTGGAGCACTTGTTCTCTGGGTGAAGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTGCCATTCATGAACTGTaGGAAAGGCTTGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSAIHEL*ERLAGG
Trigger: GCCCCCAGCAAGCCTTTCCCACAGTTCATGAATGGC...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGATCTCGACAGGAAGGTaGGCTTGGCGGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTEISTGR*AWRTEA
Trigger: AGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGAT...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CCAGCATGTGCCCATGCACAGGGCCAGGTGCACGGCTCTGCTCCCAGGCCTCATTCTGCTTGGAGGTATTaGAATTCCGTTCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: PACAHAQGQVHGSAPRPHSAWRY*NSVHSP
Trigger: TGGAGAATGAACGGAATTCCAATACCTCCAAGCAGA...ATGAGGCCTGGGAGCAGAGCCGTGCACCTGGCCCTGTGCATGGGCACATGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCTCTGCTTGGAGGTATTaGAATTCCGTTCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: ATGSRQEGGLGGQRLRPVSAWRY*NSVHSP
Trigger: TGGAGAATGAACGGAATTCCAATACCTCCAAGCAGA...GACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp CGAAGGGGTTGTAACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCCGGGCAACACAGAGGTaGACCTTCCCCGAGTATCTC +
Preference number: 4 (lower is better)
Translates to: RRGCNYSGQHRGGPSPSIRATQR*TFPEYL
Trigger: GAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCG...GATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTTACAACCCCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp TCCGTTCATTCTCCATGTCTGACTCAGATCTGCATCTTGCGCTACCGGATCTCGGGCACCAGACCCCTCTaGCCATCGAGGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SVHSPCLTQICILRYRISGTRPL*PSRSSP
Trigger: AGGAGAGCTCCTCGATGGCCAGAGGGGTCTGGTGCC...CGAGATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACATGGAGAATGAACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTATGTGGGTTGGGGAGTaGAGGTCCAGGATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSMWVGE*RSRMCS
Trigger: AGAGCACATCCTGGACCTCCACTCCCCAACCCACAT...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTGGTAGCCAGGAGAGCTaGGCGGAGATCTGCGTGATG +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPGSQES*AEICVM
Trigger: CATCACGCAGATCTCCGCCCAGCTCTCCTGGCTACC...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTGTCCTGCAGGCAACGTaGAGAACTCCACAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSVLQAT*RTPQRP
Trigger: AGGCCTTTGTGGAGTTCTCCACGTTGCCTGCAGGAC...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTATCTTGTGGGGGTGCTaGGGGTCCTGCAGGCAACGT +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPILWGC*GSCRQR
Trigger: ACGTTGCCTGCAGGACCCCCAGCACCCCCACAAGAT...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGGCAGGATGCGGCTaGGTGAGGGCGACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVVAGCG*VRATAF
Trigger: GAAGGCGGTCGCCCTCACCCAGCCGCATCCTGCCAC...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGTGCAGCATCTGGGTTTaGGGACATGGTGAGCGGGTC +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTECSIWV*GHGERV
Trigger: GACCCGCTCACCATGTCCCCAAACCCAGATGCTGCA...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTCTCCTCTGCAGCATCTaGGTTTGGGGACATGGTGAG +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSLLCSI*VWGHGE
Trigger: CTCACCATGTCCCCAAACCCAGATGCTGCAGAGGAG...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp ACTGTGGGGGATGGAGCTCTCCTTGCTGTACCTGAACCCTCAGGAGGAACCCTTGTAGGTGACCCCGAATaGAGATGGACTGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: TVGDGALLAVPEPSGGTLVGDPE*RWTVGD
Trigger: ATCCCCCACAGTCCATCTCCATTCGGGGTCACCTAC...AAGGGTTCCTCCTGAGGGTTCAGGTACAGCAAGGAGAGCTCCATCCCCCACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540658.1
CDS-3UTR CCA 90 bp GGCGTGGAAACAGGTCTTCTTCAGGCCTCGGTTCAATCTAATTCCAGCTCTGTTGCTGCCGGGCCCTTGTaGGAAGGCCTGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: GVETGLLQASVQSNSSSVAAGPL*EGLHDG
Trigger: CCCATCATGCAGGCCTTCCCACAAGGGCCCGGCAGC...AACAGAGCTGGAATTAGATTGAACCGAGGCCTGAAGAAGACCTGTTTCCACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAGTTGGTATTGGACTTTGGCTTaGGAGGAGGTGAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PACLPTATRCPAQSPRSWYWTLA*EEVRLQ
Trigger: CTGCAGCCTCACCTCCTCCCAAGCCAAAGTCCAATA...CCAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CAA 72 bp AGAGAGCAGCCAAGTCCTGGTGATGTCGGGGAGGCCTaGGATTCTACTGGGTCTGAGGCCAGCAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: REQPSPGDVGEA*DSTGSEASRFE
Trigger: CTCAAATCTGCTGGCCTCAGACCCAGTAGAATCCAAGGCCTCCCCGACATCACCAGGACTTGGCTGCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp CATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCTTCATTCTCCATGTCTaGCTCAGATCTGCATCTTGC +
Preference number: 4 (lower is better)
Translates to: HLALPDLDRKVGLADRGSFILHV*LRSASC
Trigger: GCAAGATGCAGATCTGAGTCAGACATGGAGAATGAA...GGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCCAGGATGCGGCTGGGTaGGGGCGACCGCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCQDAAG*GRPPSG
Trigger: CCCGGAAGGCGGTCGCCCTCACCCAGCCGCATCCTG...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GCACGCCAGAGAGAGGCCCCAGACATAAATGTGTGGGTTCCGTTTCTCTGTCTCGGTTTGGGGACATGGTaGGCGGGTCGTAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ARQREAPDINVWVPFLCLGLGTW*AGRSQR
Trigger: TCTTTGACTACGACCCGCTCACCATGTCCCCAAACC...GAGACAGAGAAACGGAACCCACACATTTATGTCTGGGGCCTCTCTCTGGCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTTCTCCTTGCTGTACCTaGACCCTCAGGAGGAACCTA +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSSPCCT*TLRRNL
Trigger: TAGGTTCCTCCTGAGGGTTCAGGTACAGCAAGGAGA...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGTCAGAGCTTGGACAATaGGAGCAGACTGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTESELGQ*EQTASG
Trigger: ACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGA...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CGAACCTTGGACTCTAGCAGCCGCACTGCGCCTTCATGCTCCTTCTTAGCCTCACTCAGATCTGCATCTTaGGCTACCGGATCTCGACAG +
Preference number: 4 (lower is better)
Translates to: RTLDSSSRTAPSCSFLASLRSAS*ATGSRQ
Trigger: CTGTCGAGATCCGGTAGCGCAAGATGCAGATCTGAG...TGAGGCTAAGAAGGAGCATGAAGGCGCAGTGCGGCTGCTAGAGTCCAAGGTTCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp GGCCAGAACCTTCACCTTATAGGCCATGTTGGGCCTGAGATTGAAGAACTGGTAACCAGCAGCGTGCACTaGAGCTCATCCGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GQNLHLIGHVGPEIEELVTSSVH*SSSELP
Trigger: GGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGT...TACCAGTTCTTCAATCTCAGGCCCAACATGGCCTATAAGGTGAAGGTTCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CGTTCCCCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAGCAGAGCTGTGTTTCTaGCGCTGTGTTTCTACTCTT +
Preference number: 4 (lower is better)
Translates to: RSPACLPTATRCPAQSPRAELCF*RCVSTL
Trigger: AAGAGTAGAAACACAGCGGCAGAAACACAGCTCTGC...TCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CGAAGGGGTTGTAACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCAGCTTGGCTTGGAGCTaGTGTTTCTCCTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: RRGCNYSGQHRGGPSPSISLAWS*CFSFTA
Trigger: GGCCGTGAAGGAGAAACACCAGCTCCAAGCCAAGCT...GATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTTACAACCCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CAGATCTGCATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACACTAGGTTCTCCAGCTTaGCTTGGAGCTGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: QICILRYRISTGRWAWRTLGSPA*LGAGVS
Trigger: AGAAACACCAGCTCCAAGCCAAGCTGGAGAACCTAG...TGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCAGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CGAAGGGGTTGTAACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCGCCATTCATGAACTGTaGGAAAGGCTTGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RRGCNYSGQHRGGPSPSIAIHEL*ERLAGG
Trigger: GCCCCCAGCAAGCCTTTCCCACAGTTCATGAATGGC...GATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTTACAACCCCTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp ATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCTCTGCTTGGAGGTATTATCTCGACAGGAAGGTaGGCTTGGCGGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: IAGNTEVDLPRVSLLGGIISTGR*AWRTEA
Trigger: AGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGAT...AATACCTCCAAGCAGAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp AACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCTCTGCTTGGAGGATGTGGGTTGGGGAGTaGAGGTCCAGGATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: NYSGQHRGGPSPSISAWRMWVGE*RSRMCS
Trigger: AGAGCACATCCTGGACCTCCACTCCCCAACCCACAT...CCTCCAAGCAGAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp TGCCATGTTGAGCTTCTCGATGAGGGCTTTAGTTCTGCTCCCCAGCGTGAGGTTATGCCCGCATCTATGTaGGTTGGGGAGTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: CHVELLDEGFSSAPQREVMPASM*VGEWRS
Trigger: GGACCTCCACTCCCCAACCCACATAGATGCGGGCAT...AACCTCACGCTGGGGAGCAGAACTAAAGCCCTCATCGAGAAGCTCAACATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp TGGGTCCTTCACCCAGAGAACAAGTGCTCCAGCCTTTCCTCCGGGTTTGTAATCTGCCACGGCATCTGGTaGGGTTTGGCCAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: WVLHPENKCSSLSSGFVICHGIW*GLARTF
Trigger: GAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCA...GATTACAAACCCGGAGGAAAGGCTGGAGCACTTGTTCTCTGGGTGAAGGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGAGGAGACCCGGATGGTaGCGGGGGTCACCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKRRPGW*RGSPQP
Trigger: AGGCTGGGGTGACCCCCGCCACCATCCGGGTCTCCT...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTTCCAGGAGACCCGGATaGTGGCGGGGGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVSRRPG*WRGSPQ
Trigger: CTGGGGTGACCCCCGCCACCATCCGGGTCTCCTGGA...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GGCGTGGAAACAGGTCTTCTTCAGGCCTCGGTTCAATCTAATTCCAGCTCTGTTCCACCCTCTGCCCTTTaGCATACACGCCGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: GVETGLLQASVQSNSSSVPPSAL*HTRRSR
Trigger: CCGGCTACGGCGTGTATGCCAAAGGGCAGAGGGTGG...AACAGAGCTGGAATTAGATTGAACCGAGGCCTGAAGAAGACCTGTTTCCACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGCACCGGGGTGCCCTGTaGCTGTGGCAGGATGCGGCT +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKHRGAL*LWQDAA
Trigger: AGCCGCATCCTGCCACAGCCACAGGGCACCCCGGTG...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGACTCAGATCTGTGGCCTTGGCGACGGTaGTGGACACCGGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LCLEVLEFRSFSMSDSDLWPWRR*WTPGCP
Trigger: AGGGCACCCCGGTGTCCACCACCGTCGCCAAGGCCA...CAGATCTGAGTCAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGTGGTACTCGTCTCCATaGCAACAGTGCGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LPEPIDDVGDPEWRWTVGWYSSP*QQCGCL
Trigger: CAAGCAGCCGCACTGTTGCCATGGAGACGAGTACCA...CCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGTGGGCGAGCTTTCTCTaGGGTCGTAGTCATACAGGG +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTEWASFL*GRSHTG
Trigger: CCCTGTATGACTACGACCCCAGAGAAAGCTCGCCCA...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GGCGTGGAAACAGGTCTTCTTCAGGCCTCGGTTCAATCTAATTCCAGCTCTGTTACATGTCAAGGGCTCTaGGGCCACCTGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GVETGLLQASVQSNSSSVTCQGL*GHLGLW
Trigger: CCACAGCCCCAGGTGGCCCCAGAGCCCTTGACATGT...AACAGAGCTGGAATTAGATTGAACCGAGGCCTGAAGAAGACCTGTTTCCACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CAA 72 bp GGCACCGCCGGGGGCTCCCAGCCCACAATAACACTTTaGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: GTAGGSQPTITL*ASCLMRVIFLG
Trigger: CCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGGCTGGGAGCCCCCGGCGGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CAA 72 bp CCAGGTGCTCGTCTTTGGTTTCGGGGACTCCAGAACTaGCTAATGGCTTTGATTGGGGTGCAGGTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: PGARLWFRGLQN*LMALIGVQVSG
Trigger: ACCCGAGACCTGCACCCCAATCAAAGCCATTAGCAAGTTCTGGAGTCCCCGAAACCAAAGACGAGCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CAA 72 bp TCATCCATCCTGGCGTGGGGACCCAGGTGCTCGTCTTaGGTTTCGGGGACTCCAGAACTTGCTAATGGCTTT +
Preference number: 4 (lower is better)
Translates to: SSILAWGPRCSS*VSGTPELANGF
Trigger: AAAGCCATTAGCAAGTTCTGGAGTCCCCGAAACCAAAGACGAGCACCTGGGTCCCCACGCCAGGATGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTATCCAACTGCAGCTGCTaGCGCCGTTCAGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVSNCSC*RRSAAS
Trigger: AGAGGCGGCTGAACGGCGGCAGCAGCTGCAGTTGGA...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTTGTCTGACTCAGATCTaGATCTTGCGCTACCGGATC +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSCLTQI*ILRYRI
Trigger: GATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACA...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GCACGCCAGAGAGAGGCCCCAGACATAAATGTGTGGGTTCCGTTTCTCTGTCTCCGCGACTCGTTGTCCTaGACAAAGTCCACGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ARQREAPDINVWVPFLCLRDSLS*TKSTKL
Trigger: CAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCG...GAGACAGAGAAACGGAACCCACACATTTATGTCTGGGGCCTCTCTCTGGCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp TCCCCGAGTATCTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGCCACCACCACGTCCTTaGCCACCAGCAGCGTGCACT +
Preference number: 4 (lower is better)
Translates to: SPSISAWRYWNSVHSPCLPPPRP*PPAACT
Trigger: AGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGG...CAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp TACATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTGCTCCAGCGGGAGCTaGCACGGCATCTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: YIDLAVVRKHMNHFTAPSCSSGS*HGIWWG
Trigger: ACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGCA...GCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTGGCGGCTCCAGCATGTaGCCATGCACAGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVGGSSM*PCTGPG
Trigger: ACCTGGCCCTGTGCATGGGCACATGCTGGAGCCGCC...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTCTCTCGGCCACCCTCTaGGCGGCCTCCCGGGCCATG +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCLSATL*AASRAM
Trigger: CATGGCCCGGGAGGCCGCGCAGAGGGTGGCCGAGAG...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAGGGTTACTTAAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTCGTACTGCCCCGCGCTaGTTCTCTCTAGGAAGACGC +
Preference number: 4 (lower is better)
Translates to: QGYLRKTRSGHSSQCLECRTAPR*FSLGRR
Trigger: GCGTCTTCCTAGAGAGAAGCAGCGCGGGGCAGTACG...ACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAAGTAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CGAACCTTGGACTCTAGCAGCCGCACTGCGCCTTCATGCTCCTTCTTAGCCTCAGGACACTTCCTAAAGTaGGGACACTGGAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: RTLDSSSRTAPSCSFLASGHFLK*GHWRLV
Trigger: AACCAACCTCCAGTGTCCGCACTTTAGGAAGTGTCC...TGAGGCTAAGAAGGAGCATGAAGGCGCAGTGCGGCTGCTAGAGTCCAAGGTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp ATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCTCTGCTTGGAGGTATTGGCTGTAGTTGCTGTTaGTGGGTAGCCAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: IAGNTEVDLPRVSLLGGIGCSCC*WVARRA
Trigger: AGCTCTCCTGGCTACCCACCAACAGCAACTACAGCC...AATACCTCCAAGCAGAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp CCAGCCCACAATAACACTTTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGAGGAGACCCGGATGGTaGCGGGGGTCACCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PAHNNTFGELFDEGDFSRRRPGW*RGSPQP
Trigger: AGGCTGGGGTGACCCCCGCCACCATCCGGGTCTCCT...CCTAGAAAAATCACCCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CAGGGTTACTTAAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTTCATCCATCCTGGCGTaGGGACCCAGGTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: QGYLRKTRSGHSSQCLECSSILA*GPRCSS
Trigger: AGACGAGCACCTGGGTCCCCACGCCAGGATGGATGA...ACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAAGTAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp TTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTAAGGCACGATGTCTTCGTGGCAGGATGCGGCTaGGTGAGGGCGACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: FGELFDEGDFSRVRHDVFVAGCG*VRATAF
Trigger: GAAGGCGGTCGCCCTCACCCAGCCGCATCCTGCCAC...GAAGACATCGTGCCTTACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GCCCACAATAACACTTTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTACCCGGGCCATGGCCTTaGCGACGGTGGTGGACACCG +
Preference number: 4 (lower is better)
Translates to: AHNNTFGELFDEGDFSRVPGPWP*RRWWTP
Trigger: CGGTGTCCACCACCGTCGCCAAGGCCATGGCCCGGG...TACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCGGCCTCCCGGGCCATaGCCTTGGCGACGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFRPPGP*PWRRWW
Trigger: CCACCACCGTCGCCAAGGCCATGGCCCGGGAGGCCG...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGTGGGCGAGCTTTCTCTaGGGTCGTAGTCATACAGGG +
Preference number: 4 (lower is better)
Translates to: GLPEPIDDVGDPEWRWTVWASFL*GRSHTG
Trigger: CCCTGTATGACTACGACCCCAGAGAAAGCTCGCCCA...CACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
CDS-3UTR CCA 90 bp GGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGATGGACTGTGGGGGATaGAGCTCTCCTTGCTGTACC +
Preference number: 4 (lower is better)
Translates to: GLPEPIDDVGDPEWRWTVMDCGG*SSPCCT
Trigger: GGTACAGCAAGGAGAGCTCCATCCCCCACAGTCCAT...CACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
CDS-3UTR CCA 90 bp TGTCACCAGGCTGCGGAAGGGGCCGGATATATTCACCGATCGCAGAGCTGCCTCGATACTCTCCCTGGGTaGCATCCTTCAGTTCATTTT +
Preference number: 4 (lower is better)
Translates to: CHQAAEGAGYIHRSQSCLDTLPG*HPSVHF
Trigger: AAAATGAACTGAAGGATGCCACCCAGGGAGAGTATC...GAGGCAGCTCTGCGATCGGTGAATATATCCGGCCCCTTCCGCAGCCTGGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGTCCTTGAGGGCATTGTaGGACGTGCCGCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKSLRAL*DVPLGR
Trigger: GCGGCCCAGCGGCACGTCCCACAATGCCCTCAAGGA...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
3UTR CAA 72 bp TCCGTTCATTCTCCATGTCTGACTCAGATCTGCATCTaGCGCTACCGGATCTCGACAGGAAGGTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SVHSPCLTQICI*RYRISTGRWAW
Trigger: CCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACATGGAGAATGAACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp GAGAGGGAAGCCCCTTTCTATTGGACTTTGGCTTGGGAGGAGGTGAGGCTGCAGTTGAACTGCTCACTTTaGGTCCGGCATTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EREAPFYWTLAWEEVRLQLNCSL*VRHFSS
Trigger: GGAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAA...CTGCAGCCTCACCTCCTCCCAAGCCAAAGTCCAATAGAAAGGGGCTTCCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTTGGTTGATGAAGTTCTaGTCCTGCTCGTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPWLMKF*SCSFPS
Trigger: GCTGGGGAACGAGCAGGATCAGAACTTCATCAACCA...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATGGCGTCCTCCTCGTCTaGGGCGGCGTACTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDGVLLV*GGVLPR
Trigger: GCGGGGCAGTACGCCGCCTCAGACGAGGAGGACGCC...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTGGCGTCCTCCTCGTCTaGGGCGGCGTACTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFGVLLV*GGVLPR
Trigger: GCGGGGCAGTACGCCGCCTCAGACGAGGAGGACGCC...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGCTACTTCGGGGATACTaGAAAGTCTCTTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTELLRGY*KVSSCG
Trigger: CCCACAGGAAGAGACTTTTCAGTATCCCCGAAGTAG...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR GCA 90 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGATGGATGTCTGACTCAGATCTaGATCTTGCGCTACCGGATC +
Preference number: 4 (lower is better)
Translates to: EPIDDVGDPEWRWTVGDGCLTQI*ILRYRI
Trigger: GATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACA...TCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CGAAGGGGTTGTAACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCTGTCTGACTCAGATCTaGATCTTGCGCTACCGGATC +
Preference number: 4 (lower is better)
Translates to: RRGCNYSGQHRGGPSPSICLTQI*ILRYRI
Trigger: GATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACA...GATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTTACAACCCCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTGCTCGTTCCCCAGCGTaGTTGCCAACCGCGACTCGT +
Preference number: 4 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLARSPA*LPTATR
Trigger: ACGAGTCGCGGTTGGCAAGCACGCTGGGGAACGAGC...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGCGCACTGCACGGAGATaGGGTAGGTGCAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKRTARR*GRCRLP
Trigger: TGGCAGCCTGCACCTACCGCATCTCCGTGCAGTGCG...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGACTCAGATCTGTCCAGCATGTGCCCATaGACAGGGCCAGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: LCLEVLEFRSFSMSDSDLSSMCP*TGPGAR
Trigger: CCGTGCACCTGGCCCTGTGCATGGGCACATGCTGGA...CAGATCTGAGTCAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCGGGCATTGTGGGACGTaGCGCTGGGCCGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCGHCGT*RWAASF
Trigger: GAAGGAGGCGGCCCAGCGGCACGTCCCACAATGCCC...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GCACGCCAGAGAGAGGCCCCAGACATAAATGTGTGGGTTCCGTTTCTCTGTCTCATACCGAATGACGCCTaGCACTTCTCCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ARQREAPDINVWVPFLCLIPNDA*HFSCFS
Trigger: AGAGAAGCAGGAGAAGTGGCAGGCGTCATTCGGTAT...GAGACAGAGAAACGGAACCCACACATTTATGTCTGGGGCCTCTCTCTGGCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CCTCTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGAATACCGAATGACGCCTaGCACTTCTCCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PLPGLPEPIDDVGDPEWRIPNDA*HFSCFS
Trigger: AGAGAAGCAGGAGAAGTGGCAGGCGTCATTCGGTAT...TCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
CDS-3UTR CCA 90 bp TCCCCGAGTATCTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGGGTAGCCAGGAGAGCTaGGCGGAGATCTGCGTGATG +
Preference number: 4 (lower is better)
Translates to: SPSISAWRYWNSVHSPCLGSQES*AEICVM
Trigger: CATCACGCAGATCTCCGCCCAGCTCTCCTGGCTACC...CAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGCATTGGACAGCCCGGTaGGCGTCAGCACAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKHWTAR*ASAQVV
Trigger: GACCACCTGTGCTGACGCCCACCGGGCTGTCCAATG...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTCATTGGACAGCCCGGTaGGCGTCAGCACAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVHWTAR*ASAQVV
Trigger: GACCACCTGTGCTGACGCCCACCGGGCTGTCCAATG...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTAGGCCTCATCCATCCTaGCGTGGGGACCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVRPHPS*RGDPGA
Trigger: AGCACCTGGGTCCCCACGCCAGGATGGATGAGGCCT...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCGTGGCAGGATGCGGCTaGGTGAGGGCGACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCVAGCG*VRATAF
Trigger: GAAGGCGGTCGCCCTCACCCAGCCGCATCCTGCCAC...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCCCTTGGCGACGGTGGTaGACACCGGGGTGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCPWRRW*TPGCPV
Trigger: CACAGGGCACCCCGGTGTCCACCACCGTCGCCAAGG...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp AACCCTCAGGAGGAACCCTTTTTGCCTTTGAGCGCATTGGCGTATCTTGAGAGTCCTCGACATCGACGTTaGGCGAGCTTTCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: NPQEEPFLPLSALAYLESPRHRR*ASFLWG
Trigger: ACCCCAGAGAAAGCTCGCCCAACGTCGATGTCGAGG...ACTCTCAAGATACGCCAATGCGCTCAAAGGCAAAAAGGGTTCCTCCTGAGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540658.1
CDS-3UTR CCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGACTCGAGCCAGTGTTTaGAGTGTTCAGAGCCAACAC +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTETRASV*SVQSQH
Trigger: GTGTTGGCTCTGAACACTCCAAACACTGGCTCGAGT...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp AACCCTCAGGAGGAACCCTTTTTGCCTTTGAGCGCATTGGCGTATCTTGAGAGTGACCCCGAATGGAGATaGACTGTGGGGGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: NPQEEPFLPLSALAYLESDPEWR*TVGDGA
Trigger: AGCTCCATCCCCCACAGTCCATCTCCATTCGGGGTC...ACTCTCAAGATACGCCAATGCGCTCAAAGGCAAAAAGGGTTCCTCCTGAGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540658.1
CDS-3UTR CCA 90 bp TCCGTTCATTCTCCATGTCTGACTCAGATCTGCATCTTGCGCTACCGGATCTCGATGTCGGGGAGGCCTTaGATTCTACTGGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SVHSPCLTQICILRYRISMSGRP*ILLGLR
Trigger: CCTCAGACCCAGTAGAATCCAAGGCCTCCCCGACAT...CGAGATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACATGGAGAATGAACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGGGCCTTGTGCGACTCTaGGAGGTGGCTTTGCGTGGG +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKGLVRL*EVALRG
Trigger: CCCACGCAAAGCCACCTCCCAGAGTCGCACAAGGCC...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR TCA 90 bp TCCCCGAGTATCTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGTTCTGCTCCCCAGCGTaGGGTTCATGCGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SPSISAWRYWNSVHSPCLFCSPA*GSCVSP
Trigger: AGGAGACACGCATGAACCTCACGCTGGGGAGCAGAA...CAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCAGCTGCCCCTGCTGGTaGCGCACTGCACGGAGATGC +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCSCPCW*RTARRC
Trigger: GCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCT...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGATGGAACCAGGGTCAGTTTCTaGCTCTTCATAGAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: EPIDDVGDPEWRWTVGDGTRVSF*LFIEVW
Trigger: CCAGACTTCTATGAAGAGTCAGAAACTGACCCTGGT...TCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp ACCCAGCAGGTCAATCTTGCCAGCGTGCTGCCGGAACTTCTCCAGGTCCCGGGAAAGCCACATTTTCAGTaGTGGGCACAAAAACAATTT +
Preference number: 4 (lower is better)
Translates to: TQQVNLASVLPELLQVPGKPHFQ*WAQKQF
Trigger: AAATTGTTTTTGTGCCCATCACTGAAAATGTGGCTT...TCCCGGGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR TCA 90 bp CCTCTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGAAACCCTTTTTGCCTTTaGGCGCATTGGCGTATCTTG +
Preference number: 4 (lower is better)
Translates to: PLPGLPEPIDDVGDPEWRNPFCL*AHWRIL
Trigger: CAAGATACGCCAATGCGCTCAAAGGCAAAAAGGGTT...TCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540658.1
CDS-3UTR GCA 90 bp TCCCCGAGTATCTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGTTCACCTTGTCATGCTaGCGGGCCCTTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SPSISAWRYWNSVHSPCLFTLSC*RALVGR
Trigger: CCTTCCCACAAGGGCCCGGCAGCATGACAAGGTGAA...CAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp TTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTAAGGCACGATGTCTTCCGCTCTCCTGACCTTTaGCGAGGGAGGTGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: FGELFDEGDFSRVRHDVFRSPDL*RGRWLG
Trigger: GCCTAGCCACCTCCCTCGGCAAAGGTCAGGAGAGCG...GAAGACATCGTGCCTTACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTGGCCTGTCACCAGGCTaGGGAAGGGGCCGGATATAT +
Preference number: 4 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLGLSPG*GRGRIY
Trigger: ATATATCCGGCCCCTTCCGCAGCCTGGTGACAGGCC...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp TACATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCGTTCCCCAGCGTGCTTaGCAACCGCGACTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: YIDLAVVRKHMNHFTAPSVPQRA*QPRLVV
Trigger: GACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAAC...GCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAACTTCAGCCACCCTCTaGCCTTTGGCATACACGCCG +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVTSATL*PLAYTP
Trigger: CGGCGTGTATGCCAAAGGGCAGAGGGTGGCTGAAGT...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGGGTCAGACCCCCGGCTaGTCTCTGTGTGGTACTCGT +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKGQTPG*SLCGTR
Trigger: ACGAGTACCACACAGAGAGCAGCCGGGGGTCTGACC...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTGGTCAGACCCCCGGCTaGTCTCTGTGTGGTACTCGT +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVGQTPG*SLCGTR
Trigger: ACGAGTACCACACAGAGAGCAGCCGGGGGTCTGACC...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTATGCCTGAGTTGGCAGTaGAGCAGCATTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVCLSWQ*SSIPLA
Trigger: GGCCAGAGGAATGCTGCTGCACTGCCAACTCAGGCA...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTTTACAGCTAAGCATGTaGCTGAGTTGGCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPLQLSM*LSWQCS
Trigger: GCTGCACTGCCAACTCAGGCACATGCTTAGCTGTAA...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp TTGCCGAGGGAGGTGGCTAGGCCATTCATGAACTGTGGGAAAGGCTTGCTGGGGAACGTGTTAATAGCATaGTTGGCCAAACAGACTTCC +
Preference number: 4 (lower is better)
Translates to: LPREVARPFMNCGKGLLGNVLIA*LAKQTS
Trigger: GGAAGTCTGTTTGGCCAAGCATGCTATTAACACGTT...CCCCAGCAAGCCTTTCCCACAGTTCATGAATGGCCTAGCCACCTCCCTCGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTATGGGGAAACTCGGGCTaGTCCCAGAAAGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVWGNSG*SQKVPS
Trigger: GGAAGGCACTTTCTGGGAGCAGCCCGAGTTTCCCCA...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR GCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGTCCTCCACGCTGCTCTaGCGGGTCAGCGTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLSSTLL*RVSVRR
Trigger: GCGGCGGACGCTGACCCGGCAGAGCAGCGTGGAGGA...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CCA 90 bp CAGGGTTACTTAAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTAGCTTGGCTTGGAGCTaGTGTTTCTCCTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: QGYLRKTRSGHSSQCLECSLAWS*CFSFTA
Trigger: GGCCGTGAAGGAGAAACACCAGCTCCAAGCCAAGCT...ACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAAGTAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCCACCGTTCCCCATCCTaGTGGCACCGCCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCHRSPS*WHRRGL
Trigger: GAGCCCCCGGCGGTGCCACCAGGATGGGGAACGGTG...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTGACGGTAACATCTTGTaGGGGTGCTGGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVDGNIL*GCWGSC
Trigger: GCAGGACCCCCAGCACCCCCACAAGATGTTACCGTC...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTGGGGTCACCCCAGCCTaGACGGTAACATCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLGVTPA*TVTSCG
Trigger: CCCACAAGATGTTACCGTCCAGGCTGGGGTGACCCC...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTAGGAGACCCGGATGGTaGCGGGGGTCACCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCRRPGW*RGSPQP
Trigger: AGGCTGGGGTGACCCCCGCCACCATCCGGGTCTCCT...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GCATTCCTGGGGTGGTTGGTATACTATAGAAATATTGGAGATGGCACACTGGTTCCACCCTCTGCCCTTTaGCATACACGCCGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: AFLGWLVYYRNIGDGTLVPPSAL*HTRRSR
Trigger: CCGGCTACGGCGTGTATGCCAAAGGGCAGAGGGTGG...AACCAGTGTGCCATCTCCAATATTTCTATAGTATACCAACCACCCCAGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTGCACGGTCACGCCCTTaGCCTCCAGGCTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFARSRP*PPGSAA
Trigger: GGCTGCGGAGCCTGGAGGCCAAGGGCGTGACCGTGC...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCTCCACGGACTCGCCCTaGGCGGAGAGGGTCCGCACG +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCSTDSP*AERVRT
Trigger: CGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTGGA...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCTGGCCTTGGCGACGGTaGTGGACACCGGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFWPWRR*WTPGCP
Trigger: AGGGCACCCCGGTGTCCACCACCGTCGCCAAGGCCA...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTCCCGGGCCATGGCCTTaGCGACGGTGGTGGACACCG +
Preference number: 4 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFPGPWP*RRWWTP
Trigger: CGGTGTCCACCACCGTCGCCAAGGCCATGGCCCGGG...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTTGTGGGACGTGCCGCTaGGCCGCCTCCTTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCCGTCR*AASFPH
Trigger: ATGGGGGAAGGAGGCGGCCCAGCGGCACGTCCCACA...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp AACCCTCAGGAGGAACCCTTTTTGCCTTTGAGCGCATTGGCGTATCTTGAGAGTTGGGCGAGCTTTCTCTaGGGTCGTAGTCATACAGGG +
Preference number: 4 (lower is better)
Translates to: NPQEEPFLPLSALAYLESWASFL*GRSHTG
Trigger: CCCTGTATGACTACGACCCCAGAGAAAGCTCGCCCA...ACTCTCAAGATACGCCAATGCGCTCAAAGGCAAAAAGGGTTCCTCCTGAGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540658.1
CDS-3UTR CCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTACCTCGACATCGACGTTaGGCGAGCTTTCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVPRHRR*ASFLWG
Trigger: ACCCCAGAGAAAGCTCGCCCAACGTCGATGTCGAGG...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GCATTCCTGGGGTGGTTGGTATACTATAGAAATATTGGAGATGGCACACTGGTTCGAGGGAGTGCGGGGTaGCCGTTGCTTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: AFLGWLVYYRNIGDGTLVRGSAG*PLLWQS
Trigger: GCTTTGCCAAAGCAACGGCCACCCCGCACTCCCTCG...AACCAGTGTGCCATCTCCAATATTTCTATAGTATACCAACCACCCCAGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTTTGAACTGCTCACTTTaGGTCCGGCATTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPLNCSL*VRHFSS
Trigger: GGAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAA...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGTTCATTCTCCATGTCTaGCTCAGATCTGCATCTTGC +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTEFILHV*LRSASC
Trigger: GCAAGATGCAGATCTGAGTCAGACATGGAGAATGAA...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp ATATTCACCGATCGCAGAGCTGCCTCCAATAGCGCTCTCCTGACCTTTGCCGAGTTCATTCTCCATGTCTaGCTCAGATCTGCATCTTGC +
Preference number: 4 (lower is better)
Translates to: IFTDRRAASNSALLTFAEFILHV*LRSASC
Trigger: GCAAGATGCAGATCTGAGTCAGACATGGAGAATGAA...CTCGGCAAAGGTCAGGAGAGCGCTATTGGAGGCAGCTCTGCGATCGGTGAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTAGCTGCCCCTGCTGGTaGCGCACTGCACGGAGATGC +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFSCPCW*RTARRC
Trigger: GCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCT...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCGGGCGGAGATCTGCGTaGTGTTGTCCACCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCGRRSA*CCPPAG
Trigger: ACCTGCGGGTGGACAACATCACGCAGATCTCCGCCC...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp TACATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCAGGCGCCCCTCCTCTTaGAGTCTGGAGAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: YIDLAVVRKHMNHFTAPSRRPSS*SLESHR
Trigger: CCTATGACTCTCCAGACTTCAAGAGGAGGGGCGCCT...GCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp GCATTCCTGGGGTGGTTGGTATACTATAGAAATATTGGAGATGGCACACTGGTTCGCGTCGATACCGAATaGCGCCTGCCACTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: AFLGWLVYYRNIGDGTLVRVDTE*RLPLLL
Trigger: CAGGAGAAGTGGCAGGCGTCATTCGGTATCGACGCG...AACCAGTGTGCCATCTCCAATATTTCTATAGTATACCAACCACCCCAGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp GCATTGGCGTATCTTGAGAGTAGTGGGATGGAGCATCAGAAAGATAGACTTCTACGCGTCGATACCGAATaGCGCCTGCCACTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ALAYLESSGMEHQKDRLLRVDTE*RLPLLL
Trigger: CAGGAGAAGTGGCAGGCGTCATTCGGTATCGACGCG...TAGAAGTCTATCTTTCTGATGCTCCATCCCACTACTCTCAAGATACGCCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540658.1
CDS-3UTR TCA 90 bp GGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGTTCTTCCAAGAAGTTTaGGGGCACAAGGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GLPEPIDDVGDPEWRWTVFFQEV*GHKAFL
Trigger: CAGAAAGGCCTTGTGCCCTCAAACTTCTTGGAAGAA...CACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
CDS-3UTR TCA 90 bp CTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGAGTTGCTCACTTACGTaGAGGCTACATTGCCTGATT +
Preference number: 4 (lower is better)
Translates to: LPEPIDDVGDPEWRWTVGSCSLT*RLHCLI
Trigger: AATCAGGCAATGTAGCCTTCACGTAAGTGAGCAACT...CCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp CTCTCCTTGCTGTACCTGAACCCTCAGGAGGAACCCTTTTTGCCTTTGAGCGCATTGTCCGGAAGCACATaGATCATTTCACTGCACCCA +
Preference number: 4 (lower is better)
Translates to: LSLLYLNPQEEPFLPLSALSGST*IISLHP
Trigger: TGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAA...TGCGCTCAAAGGCAAAAAGGGTTCCTCCTGAGGGTTCAGGTACAGCAAGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540658.1
CDS-3UTR TCA 90 bp CCTCTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGACAGGATGAAGACCACTaGATGCACGACACATACAAA +
Preference number: 4 (lower is better)
Translates to: PLPGLPEPIDDVGDPEWRQDEDH*MHDTYK
Trigger: TTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTG...TCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTTGCTCCAACTGCAGCTaGTGCCGCCGTTCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCCSNCS*CRRSAA
Trigger: GGCGGCTGAACGGCGGCAGCAGCTGCAGTTGGAGCA...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp AGGAGACCATCTGCTTGCCAAGTTCAGAGCCTTTCAGGAAGTCGTCCACCGAGGTTCCCCGAGTATCTCTaGTTGGAGGTATTGGAATTC +
Preference number: 4 (lower is better)
Translates to: RRPSACQVQSLSGSRPPRFPEYL*LEVLEF
Trigger: GAATTCCAATACCTCCAAGCAGAGATACTCGGGGAA...CCTCGGTGGACGACTTCCTGAAAGGCTCTGAACTTGGCAAGCAGATGGTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCCCACCACCACGTCCTTaGCCACCAGCAGCGTGCACT +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCPPPRP*PPAACT
Trigger: AGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGG...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGGTAGCCGGTAACGTTTaGGCCATTGGACAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKVAGNV*AIGQPG
Trigger: ACCGGGCTGTCCAATGGCGCAAACGTTACCGGCTAC...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTCTGAGGCGGCGTACTaGCCCGCGCTGCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCSEAAY*PALLLS
Trigger: AGAGAGAAGCAGCGCGGGGCAGTACGCCGCCTCAGA...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTTCTGAGGACCAGCGCTaGCACGGGGAAACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCSEDQR*HGETSG
Trigger: GCCGGAGGTTTCCCCGTGGCAGCGCTGGTCCTCAGA...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTGCCTGCCACTTCTCCTaGTTCTCTCTATTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPACHFS*FSLFSP
Trigger: TGGAGAAAATAGAGAGAAGCAGGAGAAGTGGCAGGC...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGTTTTCAGCAGTTTCTTaGCTTTGGAAAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LPEPIDDVGDPEWRWTVGFSAVS*LWKAAP
Trigger: AGGGGCTGCTTTCCAAAGGCAAGAAACTGCTGAAAA...CCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
CDS-3UTR GCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTAGTCCTCCTCCACGCTaGTCTGCCGGGTCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFSPPPR*SAGSAS
Trigger: GGACGCTGACCCGGCAGAGCAGCGTGGAGGAGGACT...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGCCATTCATGAACTGTaGGAAAGGCTTGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVAIHEL*ERLAGG
Trigger: GCCCCCAGCAAGCCTTTCCCACAGTTCATGAATGGC...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATCCTTGGCGACGGTGGTaGACACCGGGGTGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDPWRRW*TPGCPV
Trigger: CACAGGGCACCCCGGTGTCCACCACCGTCGCCAAGG...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTGTGGTTGGTTTAAAGTaGTTGGTAGTGCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SLDNESRLPAVTESNRSSVVGLK*LVVQKC
Trigger: GCACTTTTGCACTACCAACCACTTTAAACCAACCAC...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TCCGTTCATTCTCCATGTCTGACTCAGATCTGCATCTTGCGCTACCGGATCTCGGATCTCAAAAACCAGTaGGGGTATGGGTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: SVHSPCLTQICILRYRISDLKNQ*GYGSFT
Trigger: GGTGAAGGACCCATACCCCCACTGGTTTTTGAGATC...CGAGATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACATGGAGAATGAACGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTAACAGTGACCAGGGCCTaGGCTGCACGCGGCCACGGT +
Preference number: 4 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLTVTRA*AARGHG
Trigger: ACCGTGGCCGCGTGCAGCCCAGGCCCTGGTCACTGT...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTGGAGGTGGCTTTGCGTaGGGGGCAGCTGCCCTACTG +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCGGGFA*GAAALL
Trigger: CAGTAGGGCAGCTGCCCCCCACGCAAAGCCACCTCC...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643940.1
3UTR CAA 72 bp CTGAGATTGAAGAACTGGTACTTGTACCTGGCGGCCTaGACGATGTCGAACTCCTCCTCGTTGAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: LRLKNWYLYLAA*TMSNSSSLRKM
Trigger: CATCTTCCTCAACGAGGAGGAGTTCGACATCGTCAAGGCCGCCAGGTACAAGTACCAGTTCTTCAATCTCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
3UTR CAA 72 bp AACCCTCAGGAGGAACCCTTTTTGCCTTTGAGCGCATaGGCGTATCTTGAGAGTAGTGGGATGGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: NPQEEPFLPLSA*AYLESSGMEHQ
Trigger: CTGATGCTCCATCCCACTACTCTCAAGATACGCCAATGCGCTCAAAGGCAAAAAGGGTTCCTCCTGAGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540658.1
CDS-3UTR TCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTCCTGCTGCTTGGCACTaGGAACAGCCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCPAAWH*EQPGPG
Trigger: ACCAGGCCCTGGCTGTTCTCAGTGCCAAGCAGCAGG...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp TTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTAAGGCACGATGTCTTCCCCGGGACAGCAGGTTaGACTGCTCACTTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: FGELFDEGDFSRVRHDVFPGTAG*TAHFES
Trigger: GGACTCAAAGTGAGCAGTTCAACCTGCTGTCCCGGG...GAAGACATCGTGCCTTACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp GCCCACAATAACACTTTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTACCAATAGCGCTCTCCTaGCCTTTGCCGAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: AHNNTFGELFDEGDFSRVPIALS*PLPREV
Trigger: CACCTCCCTCGGCAAAGGTCAGGAGAGCGCTATTGG...TACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp GCCGTTGCTTTGGCAAAGCTAAGGCAGGTAATAATTCACTTCATAAATGAAGACAACCTCCGGCCCATGTaGTCCACCCGTCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: AVALAKLRQVIIHFINEDNLRPM*STRPAE
Trigger: CTCTGCAGGACGGGTGGATCACATGGGCCGGAGGTT...GTCTTCATTTATGAAGTGAATTATTACCTGCCTTAGCTTTGCCAAAGCAACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTAACCTCCGGCCCATGTaGTCCACCCGTCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCNLRPM*STRPAE
Trigger: CTCTGCAGGACGGGTGGATCACATGGGCCGGAGGTT...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCGCAGACTGCCAGCGGTaGCAGAGAGCAACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFADCQR*QRATAP
Trigger: AGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGC...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTGGAGCAGATTTAAATTaGGTCTGGTTTTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPGADLN*VWFWCG
Trigger: GCCACACCAAAACCAGACTCAATTTAAATCTGCTCC...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GGCCAGAACCTTCACCTTATAGGCCATGTTGGGCCTGAGATTGAAGAACTGGTAAGCGGATGGTTGAGATaGACATACTCTGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: GQNLHLIGHVGPEIEELVSGWLR*TYSAFT
Trigger: GGTGAAGGCAGAGTATGTGCATCTCAACCATCCGCT...TACCAGTTCTTCAATCTCAGGCCCAACATGGCCTATAAGGTGAAGGTTCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR GCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTGCCAGGGCCTGGTCATaGTCCAACTGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTARAWS*SNCSCC
Trigger: GCAGCAGCTGCAGTTGGAGCATGACCAGGCCCTGGC...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTAAGGCACGATGTCTTCACTGTGGGAAAGGCTTaGTGGGGGCCGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: FGELFDEGDFSRVRHDVFTVGKA*WGPWRC
Trigger: ACATCTCCACGGCCCCCAGCAAGCCTTTCCCACAGT...GAAGACATCGTGCCTTACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTAGGCGGCTCCAGCATGTaGCCATGCACAGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLGGSSM*PCTGPG
Trigger: ACCTGGCCCTGTGCATGGGCACATGCTGGAGCCGCC...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTTTTTCTCTAACCTGCTaGTCTCGGCCACCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVFSLTC*SRPPSA
Trigger: CGCAGAGGGTGGCCGAGAGCAGCAGGTTAGAGAAAA...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTATCTCCATGGCAACAGTaGGGCTGCTTGCCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVSPWQQ*GCLPSS
Trigger: TGAACTTGGCAAGCAGCCGCACTGTTGCCATGGAGA...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTCGCACTGCGCCTTCATaGTCCTTCTTAGCCTCAACC +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVRTAPS*SFLAST
Trigger: GGTTGAGGCTAAGAAGGAGCATGAAGGCGCAGTGCG...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CCA 90 bp GCATTCCTGGGGTGGTTGGTATACTATAGAAATATTGGAGATGGCACACTGGTTATCTCGACAGGAAGGTaGGCTTGGCGGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: AFLGWLVYYRNIGDGTLVISTGR*AWRTEA
Trigger: AGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGAT...AACCAGTGTGCCATCTCCAATATTTCTATAGTATACCAACCACCCCAGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGTCTGCTTGGAGGTATTaGAATTCCGTTCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTESAWRY*NSVHSP
Trigger: TGGAGAATGAACGGAATTCCAATACCTCCAAGCAGA...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCGGCACCAGACCCCTCTaGCCATCGAGGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFGTRPL*PSRSSP
Trigger: AGGAGAGCTCCTCGATGGCCAGAGGGGTCTGGTGCC...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCATCTTGTGGGGGTGCTaGGGGTCCTGCAGGCAACGT +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCILWGC*GSCRQR
Trigger: ACGTTGCCTGCAGGACCCCCAGCACCCCCACAAGAT...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTCCACCCTCTGCCCTTTaGCATACACGCCGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTPPSAL*HTRRSR
Trigger: CCGGCTACGGCGTGTATGCCAAAGGGCAGAGGGTGG...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp AGCTTAAAGGCCCTTAGTGGATGCTTGCATTATTTCCAAATAATTGAACATGAATCCACGGACTCGCCCTaGGCGGAGAGGGTCCGCACG +
Preference number: 4 (lower is better)
Translates to: SLKALSGCLHYFQIIEHESTDSP*AERVRT
Trigger: CGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTGGA...TTCATGTTCAATTATTTGGAAATAATGCAAGCATCCACTAAGGGCCTTTAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp TACATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCCCAGGTGCTCGTCTTTaGTTTCGGGGACTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: YIDLAVVRKHMNHFTAPSPGARL*FRGLQN
Trigger: GTTCTGGAGTCCCCGAAACCAAAGACGAGCACCTGG...GCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTTGTGGGACGTGCCGCTaGGCCGCCTCCTTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSCGTCR*AASFPH
Trigger: ATGGGGGAAGGAGGCGGCCCAGCGGCACGTCCCACA...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GCATTCCTGGGGTGGTTGGTATACTATAGAAATATTGGAGATGGCACACTGGTTGTAATCGTCGATGGATaGGACTGTCACGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: AFLGWLVYYRNIGDGTLVVIVDG*DCHGPG
Trigger: TCCCGGCCCGTGACAGTCCCATCCATCGACGATTAC...AACCAGTGTGCCATCTCCAATATTTCTATAGTATACCAACCACCCCAGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCGCCCGTAATCGTCGATaGATGGGACTGTCACGGGCC +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCARNRR*MGLSRA
Trigger: GGCCCGTGACAGTCCCATCCATCGACGATTACGGGC...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTATGGACTGTGGGGGATaGAGCTCTCCTTGCTGTACC +
Preference number: 4 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLMDCGG*SSPCCT
Trigger: GGTACAGCAAGGAGAGCTCCATCCCCCACAGTCCAT...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
CDS-3UTR CCA 90 bp GGCGTGGAAACAGGTCTTCTTCAGGCCTCGGTTCAATCTAATTCCAGCTCTGTTAGGAGATACTCTCCCTaGGTGGCATCCTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GVETGLLQASVQSNSSSVRRYSP*VASFSS
Trigger: TGAACTGAAGGATGCCACCCAGGGAGAGTATCTCCT...AACAGAGCTGGAATTAGATTGAACCGAGGCCTGAAGAAGACCTGTTTCCACGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
3UTR CAA 72 bp TTAAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTaGGAGTGTTCAGAGCCAACACTCGATCACCTGTGT +
Preference number: 4 (lower is better)
Translates to: LRKTRSGHSSQC*ECSEPTLDHLC
Trigger: ACACAGGTGATCGAGTGTTGGCTCTGAACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR CAA 72 bp TTCTCTGTCTCGAGGGAGTGCGGGGTGGCCGTTGCTTaGGCAAAGCTAAGGCAGGTAATAATTCACTTCATA +
Preference number: 4 (lower is better)
Translates to: FSVSRECGVAVA*AKLRQVIIHFI
Trigger: TATGAAGTGAATTATTACCTGCCTTAGCTTTGCCAAAGCAACGGCCACCCCGCACTCCCTCGAGACAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTCCAATAGCGCTCTCCTaGCCTTTGCCGAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTPIALS*PLPREV
Trigger: CACCTCCCTCGGCAAAGGTCAGGAGAGCGCTATTGG...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp CCTCTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATTTTTAACCCCACAATaGAGCCTTAAGTCTACCACA +
Preference number: 4 (lower is better)
Translates to: PLPGLPEPIDDVGDPEWRFLTPQ*SLKSTT
Trigger: TGTGGTAGACTTAAGGCTTCATTGTGGGGTTAAAAA...TCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp AAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTTCAGAGCCAACAGGGCAGGGGAGACATaGTCTGAAATTAGGTTGATA +
Preference number: 4 (lower is better)
Translates to: KENTFWPLEPVFGVFRANRAGET*SEIRLI
Trigger: TATCAACCTAATTTCAGATCATGTCTCCCCTGCCCT...GTTGGCTCTGAACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGATGGAAGACCAGAGTCAAAGTaGAAGTTATGCATTATGAGG +
Preference number: 4 (lower is better)
Translates to: EPIDDVGDPEWRWTVGDGRPESK*KLCIMR
Trigger: CCTCATAATGCATAACTTTCACTTTGACTCTGGTCT...TCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAAGCGGATGGTTGAGATaGACATACTCTGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVSGWLR*TYSAFT
Trigger: GGTGAAGGCAGAGTATGTGCATCTCAACCATCCGCT...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTTCCAACTGCAGCTGCTaGCGCCGTTCAGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFSNCSC*RRSAAS
Trigger: AGAGGCGGCTGAACGGCGGCAGCAGCTGCAGTTGGA...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGGCCAGGGCCTGGTCATaGTCCAACTGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLARAWS*SNCSCC
Trigger: GCAGCAGCTGCAGTTGGAGCATGACCAGGCCCTGGC...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATCGCTCTCCTGACCTTTaGCGAGGGAGGTGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDRSPDL*RGRWLG
Trigger: GCCTAGCCACCTCCCTCGGCAAAGGTCAGGAGAGCG...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCGGCCTGTCACCAGGCTaGGGAAGGGGCCGGATATAT +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFGLSPG*GRGRIY
Trigger: ATATATCCGGCCCCTTCCGCAGCCTGGTGACAGGCC...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTCGCGACTCGTTGTCCTaGACAAAGTCCACGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVRDSLS*TKSTKL
Trigger: CAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCG...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCGCTCGTTCCCCAGCGTaGTTGCCAACCGCGACTCGT +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCARSPA*LPTATR
Trigger: ACGAGTCGCGGTTGGCAAGCACGCTGGGGAACGAGC...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCTGGAGGTCCAGGATGTaGTCTCCCTCCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFWRSRM*SPSRPM
Trigger: CATCGGCCTGGAGGGAGAGCACATCCTGGACCTCCA...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GCATTCCTGGGGTGGTTGGTATACTATAGAAATATTGGAGATGGCACACTGGTTGCGGTAGGTGCAGGCTaGCATGTTGAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: AFLGWLVYYRNIGDGTLVAVGAG*HVELLD
Trigger: ATCGAGAAGCTCAACATGGCAGCCTGCACCTACCGC...AACCAGTGTGCCATCTCCAATATTTCTATAGTATACCAACCACCCCAGGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCACCAGCAGCGTGCACTaGAGCTCATCCGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCTSSVH*SSSELP
Trigger: GGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGT...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATACCAGCAGCGTGCACTaGAGCTCATCCGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDTSSVH*SSSELP
Trigger: GGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGT...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTTGCTCCAGCGGGAGCTaGCACGGCATCTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSCSSGS*HGIWWG
Trigger: ACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGCA...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATTCCAGCATGTGCCCATaGACAGGGCCAGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDSSMCP*TGPGAR
Trigger: CCGTGCACCTGGCCCTGTGCATGGGCACATGCTGGA...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTATGGTGGACACCGGGGTaGCCTGTGGCTGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLWWTPG*PVAVAG
Trigger: TCCTGCCACAGCCACAGGGCACCCCGGTGTCCACCA...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTTCTGAGGACCAGCGCTaGCACGGGGAAACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSSEDQR*HGETSG
Trigger: GCCGGAGGTTTCCCCGTGGCAGCGCTGGTCCTCAGA...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGCATCTCCTCATCATCTaGTTGTATCTCAGAGACCAT +
Preference number: 4 (lower is better)
Translates to: GLPEPIDDVGDPEWRWTVHLLII*LYLRDH
Trigger: ATGGTCTCTGAGATACAAGCAGATGATGAGGAGATG...CACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CAGGGTTACTTAAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTTATTCAGCAGGCAAATaGTGTAAGCCAAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: QGYLRKTRSGHSSQCLECYSAGK*CKPRGF
Trigger: GAAGCCCCTTGGCTTACAGCATTTGCCTGCTGAATA...ACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAAGTAACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp ATCGAAGGGGTTGTAACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCTAGAATACCTGCATaGTGTCCAAGGTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: IEGVVTIAGNTEVDLPRVSRIPA*CPRCSL
Trigger: TAGAGAACACCTTGGACAGCATGCAGGTATTCTAGA...TACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTTACAACCCCTTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647475.1
CDS-3UTR CCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTACTAGGTTCTCCAGCTTaGCTTGGAGCTGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVLGSPA*LGAGVS
Trigger: AGAAACACCAGCTCCAAGCCAAGCTGGAGAACCTAG...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTGTGGGAAAGGCTTGCTaGGGGCCGTGGAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFVGKAC*GPWRCP
Trigger: TGGACATCTCCACGGCCCCCAGCAAGCCTTTCCCAC...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCGTGGGAAAGGCTTGCTaGGGGCCGTGGAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFVGKAC*GPWRCP
Trigger: TGGACATCTCCACGGCCCCCAGCAAGCCTTTCCCAC...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGCCACGGCATCTGGTaGGGTTTGGCCAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCCHGIW*GLARTF
Trigger: GAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCA...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTAGCTGCCACGGCATCTaGTGGGGTTTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTSCHGI*WGLART
Trigger: GGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCT...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTGACGGTAACATCTTGTaGGGGTGCTGGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCDGNIL*GCWGSC
Trigger: GCAGGACCCCCAGCACCCCCACAAGATGTTACCGTC...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCGGGGTCACCCCAGCCTaGACGGTAACATCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFGVTPA*TVTSCG
Trigger: CCCACAAGATGTTACCGTCCAGGCTGGGGTGACCCC...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGGGGCGTCAGCACAGGTaGTCTCCAGGAGACCCGGAT +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLGRQHR*SPGDPD
Trigger: ATCCGGGTCTCCTGGAGACCACCTGTGCTGACGCCC...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTTCATCCATCCTGGCGTaGGGACCCAGGTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFSSILA*GPRCSS
Trigger: AGACGAGCACCTGGGTCCCCACGCCAGGATGGATGA...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTTCTCAGGAGAGGAAGTaGGAAATTTCCCCAGCGGTC +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVSQERK*EISPAV
Trigger: GACCGCTGGGGAAATTTCCCACTTCCTCTCCTGAGA...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643940.1
3UTR CAA 72 bp AGGTGGACCTTCCCCGAGTATCTCTGCTTGGAGGTATaGGAATTCCGTTCATTCTCCATGTCTGACTCAGAT +
Preference number: 4 (lower is better)
Translates to: RWTFPEYLCLEV*EFRSFSMSDSD
Trigger: ATCTGAGTCAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGAAGGTCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTATTGAACTGCTCACTTTaGGTCCGGCATTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVLNCSL*VRHFSS
Trigger: GGAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAA...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCCCGGGACAGCAGGTTaGACTGCTCACTTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFPGTAG*TAHFES
Trigger: GGACTCAAAGTGAGCAGTTCAACCTGCTGTCCCGGG...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTGGTATTTTCCCGCCGTaGGGGGCAGCTCAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSGIFPP*GAAQLR
Trigger: CCGAAGCTGAGCTGCCCCTCACGGCGGGAAAATACC...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTACGGCACTGTTGTCGGTaGTGCCCGCATCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLRHCCR*CPHLCG
Trigger: CCCACATAGATGCGGGCATCACCGACAACAGTGCCG...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGCGGCACTGTTGTCGGTaGTGCCCGCATCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLRHCCR*CPHLCG
Trigger: CCCACATAGATGCGGGCATCACCGACAACAGTGCCG...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GCCGTTGCTTTGGCAAAGCTAAGGCAGGTAATAATTCACTTCATAAATGAAGACTTCTGCTCCCCAGCGTaGGGTTCATGCGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AVALAKLRQVIIHFINEDFCSPA*GSCVSP
Trigger: AGGAGACACGCATGAACCTCACGCTGGGGAGCAGAA...GTCTTCATTTATGAAGTGAATTATTACCTGCCTTAGCTTTGCCAAAGCAACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTTGTACCTGGCGGCCTTaGCGATGTCGAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCCTWRP*RCRTPP
Trigger: AGGAGGAGTTCGACATCGTCAAGGCCGCCAGGTACA...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTGTACCTGGCGGCCTTaGCGATGTCGAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTCTWRP*RCRTPP
Trigger: AGGAGGAGTTCGACATCGTCAAGGCCGCCAGGTACA...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTAGGCGCCCCTCCTCTTaGAGTCTGGAGAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCRRPSS*SLESHR
Trigger: CCTATGACTCTCCAGACTTCAAGAGGAGGGGCGCCT...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTACGCGTCGATACCGAATaGCGCCTGCCACTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLRVDTE*RLPLLL
Trigger: CAGGAGAAGTGGCAGGCGTCATTCGGTATCGACGCG...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTATTGTCCGGAAGCACATaGATCATTTCACTGCACCCA +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVLSGST*IISLHP
Trigger: TGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAA...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCGCCTTCACCTTGTCATaGTGCCGGGCCCTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCAFTLS*CRALVG
Trigger: TCCCACAAGGGCCCGGCAGCATGACAAGGTGAAGGC...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCCAGCAGGTCAATCTTaGCAGCGTGCTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFPAGQS*QRAAGT
Trigger: AGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGG...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTACTGTGGGAAAGGCTTaGTGGGGGCCGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTTVGKA*WGPWRC
Trigger: ACATCTCCACGGCCCCCAGCAAGCCTTTCCCACAGT...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTCCAGGACGTTGTAGCTaGTCACCGTTCCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTPGRCS*SPFPIL
Trigger: CAGGATGGGGAACGGTGAGCAGCTACAACGTCCTGG...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTTGCCCACCAGCAGCGTaGACTGCAGCTCATCCGAGC +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSCPPAA*TAAHPS
Trigger: GCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCA...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GCCGTTGCTTTGGCAAAGCTAAGGCAGGTAATAATTCACTTCATAAATGAAGACTCCTTCTTCTCCCTTTaGTCCAGCGGGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: AVALAKLRQVIIHFINEDSFFSL*SSGSCH
Trigger: GTGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAGGA...GTCTTCATTTATGAAGTGAATTATTACCTGCCTTAGCTTTGCCAAAGCAACGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTAACATCTTGTGGGGGTaGTGGGGGTCCTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCNILWG*WGSCRQ
Trigger: TTGCCTGCAGGACCCCCAGCACCCCCACAAGATGTT...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTGGGAACGGCAGCAACTaGAGAGTCCACGGACTCGCC +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSGNGSN*RVHGLA
Trigger: GGCGAGTCCGTGGACTCTGCAGTTGCTGCCGTTCCC...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTGCGTGGGGACCCAGGTaGTCGTCTTTGGTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSAWGPR*SSLVSG
Trigger: CCCCGAAACCAAAGACGAGCACCTGGGTCCCCACGC...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATCGTACTGCCCCGCGCTaGTTCTCTCTAGGAAGACGC +
Preference number: 4 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDRTAPR*FSLGRR
Trigger: GCGTCTTCCTAGAGAGAAGCAGCGCGGGGCAGTACG...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTGGGAAGCTCCTCCTCTaGAGCATCTGGGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFGKLLL*SIWVWG
Trigger: TCCCCAAACCCAGATGCTGCAGAGGAGGAGCTTCCC...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGTCTGTCTCGAGGGAGTaGGGGGTGGCCGTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLSVSRE*GVAVAL
Trigger: CAAAGCAACGGCCACCCCGCACTCCCTCGAGACAGA...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp GGCCAGAACCTTCACCTTATAGGCCATGTTGGGCCTGAGATTGAAGAACTGGTACAAACAGACTTCCTCTaGAGTCTCATCAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: GQNLHLIGHVGPEIEELVQTDFL*SLIRRS
Trigger: ACTCCTTCTGATGAGACTGCAGAGGAAGTCTGTTTG...TACCAGTTCTTCAATCTCAGGCCCAACATGGCCTATAAGGTGAAGGTTCTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTACGAGGGTGAGCGGATaGTTGAGATGCACATACTCT +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVTRVSG*LRCTYS
Trigger: AGAGTATGTGCATCTCAACCATCCGCTCACCCTCGT...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTTTCTCCAGCTTGGCTTaGAGCTGGTGTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLFSSLA*SWCFSF
Trigger: GAAGGAGAAACACCAGCTCCAAGCCAAGCTGGAGAA...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTGGCACCAGACCCCTCTaGCCATCGAGGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSGTRPL*PSRSSP
Trigger: AGGAGAGCTCCTCGATGGCCAGAGGGGTCTGGTGCC...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCGGTAGCCAGGAGAGCTaGGCGGAGATCTGCGTGATG +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCGSQES*AEICVM
Trigger: CATCACGCAGATCTCCGCCCAGCTCTCCTGGCTACC...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTTGCCACGGCATCTGGTaGGGTTTGGCCAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCCHGIW*GLARTF
Trigger: GAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCA...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGAGCTGCCACGGCATCTaGTGGGGTTTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLSCHGI*WGLART
Trigger: GGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCT...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAGGGCGTCAGCACAGGTaGTCTCCAGGAGACCCGGAT +
Preference number: 4 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLGRQHR*SPGDPD
Trigger: ATCCGGGTCTCCTGGAGACCACCTGTGCTGACGCCC...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTAGGTACAGTGTTACAGTTTATTGAGTGTGTGAGCGCCAACAACAGAATTCACGCTAATGGCTTTGATTaGGGTGCAGGTCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: VGTVLQFIECVSANNRIHANGFD*GAGLGW
Trigger: CCACCCGAGACCTGCACCCCAATCAAAGCCATTAGC...GTGAATTCTGTTGTTGGCGCTCACACACTCAATAAACTGTAACACTGTACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp GCCGTTGCTTTGGCAAAGCTAAGGCAGGTAATAATTCACTTCATAAATGAAGACTGCAGCATCTGGGTTTaGGGACATGGTGAGCGGGTC +
Preference number: 4 (lower is better)
Translates to: AVALAKLRQVIIHFINEDCSIWV*GHGERV
Trigger: GACCCGCTCACCATGTCCCCAAACCCAGATGCTGCA...GTCTTCATTTATGAAGTGAATTATTACCTGCCTTAGCTTTGCCAAAGCAACGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp GGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGTTAAAGTGCATTCCTaGGGTGGTTGGTATACTATA +
Preference number: 4 (lower is better)
Translates to: GLPEPIDDVGDPEWRWTVVKVHS*GGWYTI
Trigger: TATAGTATACCAACCACCCCAGGAATGCACTTTAAC...CACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCGACCCCGAATGGAGATaGACTGTGGGGGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFDPEWR*TVGDGA
Trigger: AGCTCCATCCCCCACAGTCCATCTCCATTCGGGGTC...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTAAGGCACGATGTCTTCAAACCAGTGGGGGTATaGGTCCTTCACCCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: FGELFDEGDFSRVRHDVFKPVGV*VLHPEN
Trigger: GTTCTCTGGGTGAAGGACCCATACCCCCACTGGTTT...GAAGACATCGTGCCTTACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGACACCCCGAAAATCTTaGTGCTCGGTGGGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLTPRKS*CSVGSP
Trigger: GGGCGAGCCCACCGAGCACCAAGATTTTCGGGGTGT...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR TCA 90 bp GCCCACAATAACACTTTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTATGGTTGATGAAGTTCTaGTCCTGCTCGTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: AHNNTFGELFDEGDFSRVWLMKF*SCSFPS
Trigger: GCTGGGGAACGAGCAGGATCAGAACTTCATCAACCA...TACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR TCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGCCCTGTCTAAGAAGCTaGTCCATCATCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKPCLRS*SIISSS
Trigger: TGATGAGGAGATGATGGATCAGCTTCTTAGACAGGG...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp CAGGGTTACTTAAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTCACTACTCATCTGCTTaGCCTTGGGTTAAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: QGYLRKTRSGHSSQCLECHYSSA*PWVKFL
Trigger: TAGAAACTTAACCCAAGGTCAAGCAGATGAGTAGTG...ACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAAGTAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp CAGGGTTACTTAAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTTCTAATGTGATCATTTaGGCTGCGTGCTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: QGYLRKTRSGHSSQCLECSNVII*AACFIN
Trigger: GTTGATGAAGCACGCAGCTCAAATGATCACATTAGA...ACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAAGTAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp AGCTTAAAGGCCCTTAGTGGATGCTTGCATTATTTCCAAATAATTGAACATGAAGCAGACTGCCAGCGGTaGCAGAGAGCAACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLKALSGCLHYFQIIEHEADCQR*QRATAP
Trigger: AGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGC...TTCATGTTCAATTATTTGGAAATAATGCAAGCATCCACTAAGGGCCTTTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCTCAGAGCTTGGACAATaGGAGCAGACTGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFSELGQ*EQTASG
Trigger: ACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGA...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TACATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCCGAACCTTGGACTTCTaGAGAAGGTCAATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: YIDLAVVRKHMNHFTAPSRTLDF*RRSISC
Trigger: GCAGGAAATTGACCTTCTGCAGAAGTCCAAGGTTCG...GCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCCTCAGATCTGCATCTTaGGCTACCGGATCTCGACAG +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCLRSAS*ATGSRQ
Trigger: CTGTCGAGATCCGGTAGCGCAAGATGCAGATCTGAG...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTAAGGCACGATGTCTTCTGTCTGACTCAGATCTaGATCTTGCGCTACCGGATC +
Preference number: 4 (lower is better)
Translates to: FGELFDEGDFSRVRHDVFCLTQI*ILRYRI
Trigger: GATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACA...GAAGACATCGTGCCTTACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAGTTCCCCAGCGTGCTTaGCAACCGCGACTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLVPQRA*QPRLVV
Trigger: GACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAAC...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTATCCTTCTTCTCCCTTTaGTCCAGCGGGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLSFFSL*SSGSCH
Trigger: GTGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAGGA...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTAACATCTTGTGGGGGTaGTGGGGGTCCTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFNILWG*WGSCRQ
Trigger: TTGCCTGCAGGACCCCCAGCACCCCCACAAGATGTT...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTAGTAGCCGGTAACGTTTaGGCCATTGGACAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLVAGNV*AIGQPG
Trigger: ACCGGGCTGTCCAATGGCGCAAACGTTACCGGCTAC...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp AGCTTAAAGGCCCTTAGTGGATGCTTGCATTATTTCCAAATAATTGAACATGAAGCGTGGGGACCCAGGTaGTCGTCTTTGGTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: SLKALSGCLHYFQIIEHEAWGPR*SSLVSG
Trigger: CCCCGAAACCAAAGACGAGCACCTGGGTCCCCACGC...TTCATGTTCAATTATTTGGAAATAATGCAAGCATCCACTAAGGGCCTTTAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCTTTTCTCTAACCTGCTaGTCTCGGCCACCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFFSLTC*SRPPSA
Trigger: CGCAGAGGGTGGCCGAGAGCAGCAGGTTAGAGAAAA...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGTTTACTCTAATACGCTaGAGGACGACTTCACCTCGC +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKFTLIR*RTTSPR
Trigger: GCGAGGTGAAGTCGTCCTGCAGCGTATTAGAGTAAA...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTATGAAGACCACTGAATaGACGACACATACAAAGTAT +
Preference number: 4 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPMKTTE*TTHTKY
Trigger: ATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCAT...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CCAGCCCACAATAACACTTTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGCCGGGCAGGGAAGATaGTATTCTCTAGAATACCTG +
Preference number: 4 (lower is better)
Translates to: PAHNNTFGELFDEGDFSRAGQGR*YSLEYL
Trigger: CAGGTATTCTAGAGAATAGCATCTTCCCTGCCCGGC...CCTAGAAAAATCACCCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647475.1
CDS-3UTR CCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTAAGAACAGCCAGGGCCTaGTCATGCTCCAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLRTARA*SCSNCS
Trigger: GCTGCAGTTGGAGCATGACCAGGCCCTGGCTGTTCT...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GCATTCCTGGGGTGGTTGGTATACTATAGAAATATTGGAGATGGCACACTGGTTCCAGCTCTCGAACCTTaGACTTCTGCAGAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: AFLGWLVYYRNIGDGTLVPALEP*TSAEGQ
Trigger: TTGACCTTCTGCAGAAGTCCAAGGTTCGAGAGCTGG...AACCAGTGTGCCATCTCCAATATTTCTATAGTATACCAACCACCCCAGGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTACCGAGTATCTCTGCTTaGAGGTATTGGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVPSISA*RYWNSV
Trigger: AACGGAATTCCAATACCTCCAAGCAGAGATACTCGG...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTCGGGCAACACAGAGGTaGACCTTCCCCGAGTATCTC +
Preference number: 4 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFRATQR*TFPEYL
Trigger: GAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCG...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTAATGCCCGCATCTATGTaGGTTGGGGAGTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLMPASM*VGEWRS
Trigger: GGACCTCCACTCCCCAACCCACATAGATGCGGGCAT...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCATGCCCGCATCTATGTaGGTTGGGGAGTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCMPASM*VGEWRS
Trigger: GGACCTCCACTCCCCAACCCACATAGATGCGGGCAT...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTCCAGGTGCTCGTCTTTaGTTTCGGGGACTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCPGARL*FRGLQN
Trigger: GTTCTGGAGTCCCCGAAACCAAAGACGAGCACCTGG...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCCGGCTGCTCTCTGTGTaGTACTCGTCTCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFRLLSV*YSSPWQ
Trigger: TTGCCATGGAGACGAGTACCACACAGAGAGCAGCCG...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp AGCTTAAAGGCCCTTAGTGGATGCTTGCATTATTTCCAAATAATTGAACATGAAATCTTGAGGGCATTGTaGGACGTGCCGCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SLKALSGCLHYFQIIEHEILRAL*DVPLGR
Trigger: GCGGCCCAGCGGCACGTCCCACAATGCCCTCAAGAT...TTCATGTTCAATTATTTGGAAATAATGCAAGCATCCACTAAGGGCCTTTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCCTCTTCATAGAAGTCTaGAGAAAGGCGGTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCLFIEV*RKAVSP
Trigger: GGGCGAGACCGCCTTTCTCCAGACTTCTATGAAGAG...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCTCCTCTGCAGCATCTaGGTTTGGGGACATGGTGAG +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFLLCSI*VWGHGE
Trigger: CTCACCATGTCCCCAAACCCAGATGCTGCAGAGGAG...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp AACCCTCAGGAGGAACCCTTTTTGCCTTTGAGCGCATTGGCGTATCTTGAGAGTTTGAGAGTAGTGGGATaGAGCATCAGAAAGATAGAC +
Preference number: 4 (lower is better)
Translates to: NPQEEPFLPLSALAYLESLRVVG*SIRKID
Trigger: GTCTATCTTTCTGATGCTCCATCCCACTACTCTCAA...ACTCTCAAGATACGCCAATGCGCTCAAAGGCAAAAAGGGTTCCTCCTGAGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540658.1
CDS-3UTR CCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCAGCATGTGCCTGAGTTaGCAGTGCAGCAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCSMCLS*QCSSIP
Trigger: AGGAATGCTGCTGCACTGCCAACTCAGGCACATGCT...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGTTTTTGAAGACACAATaGGGAAAGCTTTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: HLPNQSLDNESRLPAVTEFLKTQ*GKLCHS
Trigger: TGAATGACAAAGCTTTCCCCATTGTGTCTTCAAAAA...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCCCTTCCGAGGTCCTATaGTCAGTGCAGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFPSEVL*SVQSLR
Trigger: CCTCAAGGACTGCACTGACCATAGGACCTCGGAAGG...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
3UTR CAA 72 bp TTTATTGAGTGTGTGAGCGCCAACAACAGAATTCACTaGGTAACATCGTACTGTCCCCGTTTCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: FIECVSANNRIH*VTSYCPRFPPG
Trigger: TCCTGGTGGGAAACGGGGACAGTACGATGTTACCAAGTGAATTCTGTTGTTGGCGCTCACACACTCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTCCCGGGACAGCAGGTTaGACTGCTCACTTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSPGTAG*TAHFES
Trigger: GGACTCAAAGTGAGCAGTTCAACCTGCTGTCCCGGG...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTTGGTTGATGAAGTTCTaGTCCTGCTCGTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCWLMKF*SCSFPS
Trigger: GCTGGGGAACGAGCAGGATCAGAACTTCATCAACCA...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTAGGTTTGGGGACATGGTaGGCGGGTCGTAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLGLGTW*AGRSQR
Trigger: TCTTTGACTACGACCCGCTCACCATGTCCCCAAACC...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTACTATTCCATCTAATGTaGTCATTTGAGCTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVLFHLM*SFELRA
Trigger: AGCACGCAGCTCAAATGATCACATTAGATGGAATAG...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTTCCTTTAAGGGCAGATaGCAAATGCACAAAGACTGG +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVSFKGR*QMHKDW
Trigger: CCAGTCTTTGTGCATTTGTCATCTGCCCTTAAAGGA...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGCAGGATGAAGACCACTaGATGCACGACACATACAAA +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKQDEDH*MHDTYK
Trigger: TTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTG...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGACAGCCTGTACAACTTaGTCTCAAACCACTGTGTCA +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKTACTT*SQTTVS
Trigger: TGACACAGTGGTTTGAGATCAAGTTGTACAGGCTGT...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCCCCAAAGCTTGGGTCTaGTCGAATGTGGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCPKAWV*SNVASA
Trigger: TGCTGAGGCCACATTCGATCAGACCCAAGCTTTGGG...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR TCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTTCTTAGCCTCAACCTaGGCCTTCTGCAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCFLAST*AFCRRS
Trigger: TGACCTTCTGCAGAAGGCTCAGGTTGAGGCTAAGAA...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR GCA 90 bp GTAGGTACAGTGTTACAGTTTATTGAGTGTGTGAGCGCCAACAACAGAATTCACAGCGGATGGTTGAGATaGACATACTCTGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: VGTVLQFIECVSANNRIHSGWLR*TYSAFT
Trigger: GGTGAAGGCAGAGTATGTGCATCTCAACCATCCGCT...GTGAATTCTGTTGTTGGCGCTCACACACTCAATAAACTGTAACACTGTACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGACTCAGATCTGAGAAGGTCAATTTCCTaGTGCTTGGCACTGAGAACA +
Preference number: 4 (lower is better)
Translates to: LCLEVLEFRSFSMSDSDLRRSIS*CLALRT
Trigger: TGTTCTCAGTGCCAAGCAGCAGGAAATTGACCTTCT...CAGATCTGAGTCAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR GCA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTTCAATCTTGCCAGCGTaGTGCCGGAACTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFSILPA*CRNFSR
Trigger: CCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGA...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTCCAGCAGGTCAATCTTaGCAGCGTGCTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSPAGQS*QRAAGT
Trigger: AGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGG...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTTTCCCCGAGTATCTCTaGTTGGAGGTATTGGAATTC +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVFPEYL*LEVLEF
Trigger: GAATTCCAATACCTCCAAGCAGAGATACTCGGGGAA...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGTTCCCCGAGTATCTCTaGTTGGAGGTATTGGAATTC +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKFPEYL*LEVLEF
Trigger: GAATTCCAATACCTCCAAGCAGAGATACTCGGGGAA...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGGCGGTAGGTGCAGGCTaGCATGTTGAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLAVGAG*HVELLD
Trigger: ATCGAGAAGCTCAACATGGCAGCCTGCACCTACCGC...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CCTATAGTAAACATGTTTGTTAGGTTGTGCTTTTTCCAAGAGTGGCTAACAATGACTTCAGCCACCCTCTaGCCTTTGGCATACACGCCG +
Preference number: 4 (lower is better)
Translates to: PIVNMFVRLCFFQEWLTMTSATL*PLAYTP
Trigger: CGGCGTGTATGCCAAAGGGCAGAGGGTGGCTGAAGT...CATTGTTAGCCACTCTTGGAAAAAGCACAACCTAACAAACATGTTTACTATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTGTGCGGGGTGGCCGTTaGTTTGGCAAAGCTAAGGCA +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSVRGGR*FGKAKA
Trigger: TGCCTTAGCTTTGCCAAAGCAACGGCCACCCCGCAC...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTTTTTCAGCAGTTTCTTaGCTTTGGAAAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVFSAVS*LWKAAP
Trigger: AGGGGCTGCTTTCCAAAGGCAAGAAACTGCTGAAAA...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTAGCTGCTCCCAGAAAGTaGCTTCCGAGGTCCTATGGT +
Preference number: 4 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLAAPRK*LPRSYG
Trigger: ACCATAGGACCTCGGAAGGCACTTTCTGGGAGCAGC...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CCA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAGAACAGCCAGGGCCTaGTCATGCTCCAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLRTARA*SCSNCS
Trigger: GCTGCAGTTGGAGCATGACCAGGCCCTGGCTGTTCT...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGACTCAGATCTGCCGAGTATCTCTGCTTaGAGGTATTGGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: LCLEVLEFRSFSMSDSDLPSISA*RYWNSV
Trigger: AACGGAATTCCAATACCTCCAAGCAGAGATACTCGG...CAGATCTGAGTCAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CCA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTACGGGCAACACAGAGGTaGACCTTCCCCGAGTATCTC +
Preference number: 4 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLRATQR*TFPEYL
Trigger: GAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCG...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCATGTGGGTTGGGGAGTaGAGGTCCAGGATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCMWVGE*RSRMCS
Trigger: AGAGCACATCCTGGACCTCCACTCCCCAACCCACAT...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGGGCTGTAGTTGCTGTTaGTGGGTAGCCAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLGCSCC*WVARRA
Trigger: AGCTCTCCTGGCTACCCACCAACAGCAACTACAGCC...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATGGCTGTAGTTGCTGTTaGTGGGTAGCCAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDGCSCC*WVARRA
Trigger: AGCTCTCCTGGCTACCCACCAACAGCAACTACAGCC...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGGTCCTGCAGGCAACGTaGAGAACTCCACAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLVLQAT*RTPQRP
Trigger: AGGCCTTTGTGGAGTTCTCCACGTTGCCTGCAGGAC...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATGCTAATGGCTTTGATTaGGGTGCAGGTCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDANGFD*GAGLGW
Trigger: CCACCCGAGACCTGCACCCCAATCAAAGCCATTAGC...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GCCGTTGCTTTGGCAAAGCTAAGGCAGGTAATAATTCACTTCATAAATGAAGACCCTCCTCTTGAAGTCTaGAGAGTCATAGGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: AVALAKLRQVIIHFINEDPPLEV*RVIGVL
Trigger: GAGGACGCCTATGACTCTCCAGACTTCAAGAGGAGG...GTCTTCATTTATGAAGTGAATTATTACCTGCCTTAGCTTTGCCAAAGCAACGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTTGGTACTCGTCTCCATaGCAACAGTGCGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFWYSSP*QQCGCL
Trigger: CAAGCAGCCGCACTGTTGCCATGGAGACGAGTACCA...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGCGGCTGCTCTCTGTGTaGTACTCGTCTCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLRLLSV*YSSPWQ
Trigger: TTGCCATGGAGACGAGTACCACACAGAGAGCAGCCG...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTGTAATCGTCGATGGATaGGACTGTCACGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSVIVDG*DCHGPG
Trigger: TCCCGGCCCGTGACAGTCCCATCCATCGACGATTAC...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTATTGAGAGTAGTGGGATaGAGCATCAGAAAGATAGAC +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVLRVVG*SIRKID
Trigger: GTCTATCTTTCTGATGCTCCATCCCACTACTCTCAA...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTATGGACTGTGGGGGATaGAGCTCTCCTTGCTGTACC +
Preference number: 4 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFMDCGG*SSPCCT
Trigger: GGTACAGCAAGGAGAGCTCCATCCCCCACAGTCCAT...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTGACCCCGAATGGAGATaGACTGTGGGGGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSDPEWR*TVGDGA
Trigger: AGCTCCATCCCCCACAGTCCATCTCCATTCGGGGTC...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGGTAGGTGACCCCGAATaGAGATGGACTGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLVGDPE*RWTVGD
Trigger: ATCCCCCACAGTCCATCTCCATTCGGGGTCACCTAC...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR CAA 72 bp CCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTaGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: PLLFVLVVGLKW*VVQKCISLLVS
Trigger: TGACACCAGTAGAGAAATGCACTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCCCCTGTCTAAGAAGCTaGTCCATCATCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCPCLRS*SIISSS
Trigger: TGATGAGGAGATGATGGATCAGCTTCTTAGACAGGG...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CCTATAGTAAACATGTTTGTTAGGTTGTGCTTTTTCCAAGAGTGGCTAACAATGTCAATCTTGCCAGCGTaGTGCCGGAACTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PIVNMFVRLCFFQEWLTMSILPA*CRNFSR
Trigger: CCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGA...CATTGTTAGCCACTCTTGGAAAAAGCACAACCTAACAAACATGTTTACTATAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTAACAGTGCGGCTGCTTaGCAAGTTCAGAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTNSAAA*QVQSLS
Trigger: TGAAAGGCTCTGAACTTGGCAAGCAGCCGCACTGTT...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTAACAGTGCGGCTGCTTaGCAAGTTCAGAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCNSAAA*QVQSLS
Trigger: TGAAAGGCTCTGAACTTGGCAAGCAGCCGCACTGTT...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTCATCTCCTCATCATCTaGTTGTATCTCAGAGACCAT +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVHLLII*LYLRDH
Trigger: ATGGTCTCTGAGATACAAGCAGATGATGAGGAGATG...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAAGGGCAGATGACAAATaGACAAAGACTGGAATTACA +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVRADDK*TKTGIT
Trigger: TGTAATTCCAGTCTTTGTGCATTTGTCATCTGCCCT...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGTTGTGTGCCATTCATTaGTGTGTATTTGGGTATGGC +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKLCAIH*CVFGYG
Trigger: GCCATACCCAAATACACAGCAATGAATGGCACACAA...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTATTTAGAAGCGAGCTGTaGCAAGGCTCCGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLFRSEL*QGSGGS
Trigger: TGAACCTCCGGAGCCTTGGCACAGCTCGCTTCTAAA...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR GCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGGAGATGCACATACTCTaGCTTCACCACAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKEMHIL*LHHKVS
Trigger: AGAAACTTTGTGGTGAAGGCAGAGTATGTGCATCTC...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CCA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTTCTGCTTGGAGGTATTaGAATTCCGTTCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLSAWRY*NSVHSP
Trigger: TGGAGAATGAACGGAATTCCAATACCTCCAAGCAGA...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCTGAGATTGAAGAACTaGTACTTGTACCTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFLRLKN*YLYLAA
Trigger: GGCCGCCAGGTACAAGTACCAGTTCTTCAATCTCAG...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGCTCTTCATAGAAGTCTaGAGAAAGGCGGTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLLFIEV*RKAVSP
Trigger: GGGCGAGACCGCCTTTCTCCAGACTTCTATGAAGAG...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GCATTCCTGGGGTGGTTGGTATACTATAGAAATATTGGAGATGGCACACTGGTTAGTGCATTTCTCTACTaGTGTCAGGGGAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: AFLGWLVYYRNIGDGTLVSAFLY*CQGRRL
Trigger: CAATCTTCTCCCCTGACACCAGTAGAGAAATGCACT...AACCAGTGTGCCATCTCCAATATTTCTATAGTATACCAACCACCCCAGGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTTTGTCCGGAAGCACATaGATCATTTCACTGCACCCA +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFLSGST*IISLHP
Trigger: TGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAA...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GTAGGTACAGTGTTACAGTTTATTGAGTGTGTGAGCGCCAACAACAGAATTCACTCCTTTAAGGGCAGATaGCAAATGCACAAAGACTGG +
Preference number: 4 (lower is better)
Translates to: VGTVLQFIECVSANNRIHSFKGR*QMHKDW
Trigger: CCAGTCTTTGTGCATTTGTCATCTGCCCTTAAAGGA...GTGAATTCTGTTGTTGGCGCTCACACACTCAATAAACTGTAACACTGTACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTAACCCTTTTTGCCTTTaGGCGCATTGGCGTATCTTG +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFNPFCL*AHWRIL
Trigger: CAAGATACGCCAATGCGCTCAAAGGCAAAAAGGGTT...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR GCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTGAGATGCACATACTCTaGCTTCACCTTGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFEMHIL*LHLVML
Trigger: CAGCATGACAAGGTGAAGGCAGAGTATGTGCATCTC...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTACTCAGATCTGCATCTTaGGCTACCGGATCTCGACAG +
Preference number: 4 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLLRSAS*ATGSRQ
Trigger: CTGTCGAGATCCGGTAGCGCAAGATGCAGATCTGAG...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CCTATAGTAAACATGTTTGTTAGGTTGTGCTTTTTCCAAGAGTGGCTAACAATGTCTCCATGGCAACAGTaGGGCTGCTTGCCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PIVNMFVRLCFFQEWLTMSPWQQ*GCLPSS
Trigger: TGAACTTGGCAAGCAGCCGCACTGTTGCCATGGAGA...CATTGTTAGCCACTCTTGGAAAAAGCACAACCTAACAAACATGTTTACTATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCATACCGAATGACGCCTaGCACTTCTCCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCIPNDA*HFSCFS
Trigger: AGAGAAGCAGGAGAAGTGGCAGGCGTCATTCGGTAT...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGAGGGCAGATGACAAATaGACAAAGACTGGAATTACA +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKRADDK*TKTGIT
Trigger: TGTAATTCCAGTCTTTGTGCATTTGTCATCTGCCCT...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTAGGTTGGAGTACTGGTaGTTTACCAAACAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVRLEYW*FTKQSY
Trigger: GTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCT...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp GCATTCCTGGGGTGGTTGGTATACTATAGAAATATTGGAGATGGCACACTGGTTTTGTGTGCCATTCATTaGTGTGTATTTGGGTATGGC +
Preference number: 4 (lower is better)
Translates to: AFLGWLVYYRNIGDGTLVLCAIH*CVFGYG
Trigger: GCCATACCCAAATACACAGCAATGAATGGCACACAA...AACCAGTGTGCCATCTCCAATATTTCTATAGTATACCAACCACCCCAGGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGTGTCGGGCATGGTTATaGTTTTCTTCCAGACACCCC +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLCRAWL*FSSRHP
Trigger: GGGGTGTCTGGAAGAAAAGCATAACCATGCCCGACA...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGTTCTCCAGCTTGGCTTaGAGCTGGTGTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLFSSLA*SWCFSF
Trigger: GAAGGAGAAACACCAGCTCCAAGCCAAGCTGGAGAA...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGCTAGGTTCTCCAGCTTaGCTTGGAGCTGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLLGSPA*LGAGVS
Trigger: AGAAACACCAGCTCCAAGCCAAGCTGGAGAACCTAG...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTCTGAGATTGAAGAACTaGTACTTGTACCTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFLRLKN*YLYLAA
Trigger: GGCCGCCAGGTACAAGTACCAGTTCTTCAATCTCAG...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTACCTCCTCTTGAAGTCTaGAGAGTCATAGGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLPPLEV*RVIGVL
Trigger: GAGGACGCCTATGACTCTCCAGACTTCAAGAGGAGG...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp AGCTTAAAGGCCCTTAGTGGATGCTTGCATTATTTCCAAATAATTGAACATGAAGTAGGTGACCCCGAATaGAGATGGACTGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: SLKALSGCLHYFQIIEHEVGDPE*RWTVGD
Trigger: ATCCCCCACAGTCCATCTCCATTCGGGGTCACCTAC...TTCATGTTCAATTATTTGGAAATAATGCAAGCATCCACTAAGGGCCTTTAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTCTTTGTTCTCGTGGTTaGTTTAAAGTGGTTGGTAGT +
Preference number: 4 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLLCSRG*FKVVGS
Trigger: ACTACCAACCACTTTAAACCAACCACGAGAACAAAG...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCTCCCAAATCAGAGCTTaGACAATGAGAGCAGACTGC +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFSQIRA*TMRADC
Trigger: GCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGA...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTCCCAAATCAGAGCTTaGACAATGAGAGCAGACTGC +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTSQIRA*TMRADC
Trigger: GCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGA...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTACTGTGTATTTGGGTATaGCATTTTGACAACGAAAGT +
Preference number: 4 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVLCIWV*HFDNES
Trigger: ACTTTCGTTGTCAAAATGCCATACCCAAATACACAG...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR CAA 72 bp CATTTGAGCTGCGTGCTTCATCAACTTAGTATTGCATaGGTATACCAACAACAAACGCGTGTTGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: HLSCVLHQLSIA*VYQQQTRVAAT
Trigger: AGTTGCTGCAACACGCGTTTGTTGTTGGTATACCAATGCAATACTAAGTTGATGAAGCACGCAGCTCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR CAA 72 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTaGTGTGCCATTCATTGCTGTGTATTTGGGTATGGC +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDY*CAIHCCVFGYG
Trigger: GCCATACCCAAATACACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGACTTCTGTCACAGGATaGTTGTGCTTTGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLTSVTG*LCFEEE
Trigger: CTCCTCCTCAAAGCACAATCATCCTGTGACAGAAGT...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGGAAAGTTATGCATTATaGGGCAAGCATTTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKESYAL*GKHFEK
Trigger: CTTCTCAAAATGCTTGCCTCATAATGCATAACTTTC...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCGGAGCAGATTTAAATTaGGTCTGGTTTTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFGADLN*VWFWCG
Trigger: GCCACACCAAAACCAGACTCAATTTAAATCTGCTCC...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGATGAAGACCACTGAATaGACGACACATACAAAGTAT +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKMKTTE*TTHTKY
Trigger: ATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCAT...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTTGTGGATTACTTGTGTaGCATTCATTGCTGTGTATT +
Preference number: 4 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLCGLLV*HSLLCI
Trigger: AATACACAGCAATGAATGGCACACAAGTAATCCACA...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACGAGGGTGAGCGGATaGTTGAGATGCACATACTCT +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSTRVSG*LRCTYS
Trigger: AGAGTATGTGCATCTCAACCATCCGCTCACCCTCGT...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTTGCTTTTTCCAAGAGTaGCTAACAATGCAATATGCA +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVCFFQE*LTMQYA
Trigger: TGCATATTGCATTGTTAGCCACTCTTGGAAAAAGCA...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTAGTGCATTTCTCTACTaGTGTCAGGGGAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCSAFLY*CQGRRL
Trigger: CAATCTTCTCCCCTGACACCAGTAGAGAAATGCACT...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCGTGGTTGGTTTAAAGTaGTTGGTAGTGCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCVVGLK*LVVQKC
Trigger: GCACTTTTGCACTACCAACCACTTTAAACCAACCAC...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTAGGTACAGTGTTACAGTTTATTGAGTGTGTGAGCGCCAACAACAGAATTCACGGAAGGTTGGAGTACTaGTGCTTTACCAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: VGTVLQFIECVSANNRIHGRLEY*CFTKQS
Trigger: ACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCC...GTGAATTCTGTTGTTGGCGCTCACACACTCAATAAACTGTAACACTGTACCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGTCATTGCTGTGTATTTaGGTATGGCATTTTGACAAC +
Preference number: 4 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKSLLCI*VWHFDN
Trigger: GTTGTCAAAATGCCATACCCAAATACACAGCAATGA...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR CAA 72 bp TTAGTATTGCATTGGTATACCAACAACAAACGCGTGTaGCAGCAACTTCTGTCACAGGATGATTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LVLHWYTNNKRV*QQLLSQDDCAL
Trigger: CAAAGCACAATCATCCTGTGACAGAAGTTGCTGCAACACGCGTTTGTTGTTGGTATACCAATGCAATACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTATTCATTCTCCATGTCTaGCTCAGATCTGCATCTTGC +
Preference number: 4 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLFILHV*LRSASC
Trigger: GCAAGATGCAGATCTGAGTCAGACATGGAGAATGAA...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAACCAGGGTCAGTTTCTaGCTCTTCATAGAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLTRVSF*LFIEVW
Trigger: CCAGACTTCTATGAAGAGTCAGAAACTGACCCTGGT...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTATTCTTCCAAGAAGTTTaGGGGCACAAGGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLFFQEV*GHKAFL
Trigger: CAGAAAGGCCTTGTGCCCTCAAACTTCTTGGAAGAA...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTGAAGGCTACATTGCCTaGTTAAGGTGTGAAATGAAC +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTEGYIA*LRCEMN
Trigger: GTTCATTTCACACCTTAATCAGGCAATGTAGCCTTC...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTAGTTTATTGAGTGTGTaGGCGCCAACAACAGAATTC +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTSLLSV*APTTEF
Trigger: GAATTCTGTTGTTGGCGCTCACACACTCAATAAACT...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCACAGCCTGTACAACTTaGTCTCAAACCACTGTGTCA +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCTACTT*SQTTVS
Trigger: TGACACAGTGGTTTGAGATCAAGTTGTACAGGCTGT...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCAGAAGGTCAATTTCCTaGTGCTTGGCACTGAGAACA +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCRRSIS*CLALRT
Trigger: TGTTCTCAGTGCCAAGCAGCAGGAAATTGACCTTCT...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATAGAAGGTCAATTTCCTaGTGCTTGGCACTGAGAACA +
Preference number: 4 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDRRSIS*CLALRT
Trigger: TGTTCTCAGTGCCAAGCAGCAGGAAATTGACCTTCT...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp CCTATAGTAAACATGTTTGTTAGGTTGTGCTTTTTCCAAGAGTGGCTAACAATGGCCTGCCACTTCTCCTaGTTCTCTCTATTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PIVNMFVRLCFFQEWLTMACHFS*FSLFSP
Trigger: TGGAGAAAATAGAGAGAAGCAGGAGAAGTGGCAGGC...CATTGTTAGCCACTCTTGGAAAAAGCACAACCTAACAAACATGTTTACTATAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CCTATAGTAAACATGTTTGTTAGGTTGTGCTTTTTCCAAGAGTGGCTAACAATGACAACAAACGCGTGTTaGAGCAACTTCTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: PIVNMFVRLCFFQEWLTMTTNAC*SNFCHR
Trigger: CCTGTGACAGAAGTTGCTGCAACACGCGTTTGTTGT...CATTGTTAGCCACTCTTGGAAAAAGCACAACCTAACAAACATGTTTACTATAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGCCAGACATAAATGTGTaGGTTCCGTTTCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLPDINV*VPFLCL
Trigger: GAGACAGAGAAACGGAACCCACACATTTATGTCTGG...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTGGAAGGTTGGAGTACTaGTGCTTTACCAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFGRLEY*CFTKQS
Trigger: ACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCC...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTTTTTTGAAGACACAATaGGGAAAGCTTTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVFLKTQ*GKLCHS
Trigger: TGAATGACAAAGCTTTCCCCATTGTGTCTTCAAAAA...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTCCCTACTGTCGGGCATaGTTATGCTTTTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSPYCRA*LCFSSR
Trigger: TCTGGAAGAAAAGCATAACCATGCCCGACAGTAGGG...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR TCA 90 bp AGCTTAAAGGCCCTTAGTGGATGCTTGCATTATTTCCAAATAATTGAACATGAACTTCCTTTTTGCCTTTaGGCGCATTGGCGTATCTTG +
Preference number: 4 (lower is better)
Translates to: SLKALSGCLHYFQIIEHELPFCL*AHWRIL
Trigger: CAAGATACGCCAATGCGCTCAAAGGCAAAAAGGAAG...TTCATGTTCAATTATTTGGAAATAATGCAAGCATCCACTAAGGGCCTTTAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTTGTGATCATTTGAGCTaGGTGCTTCATCAACTTAGT +
Preference number: 4 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFCDHLS*VLHQLS
Trigger: ACTAAGTTGATGAAGCACGCAGCTCAAATGATCACA...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTTTTTCAGCAGTTTCTTaGCTTTGGAAAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSFSAVS*LWKAAP
Trigger: AGGGGCTGCTTTCCAAAGGCAAGAAACTGCTGAAAA...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTCCGAGTATCTCTGCTTaGAGGTATTGGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSPSISA*RYWNSV
Trigger: AACGGAATTCCAATACCTCCAAGCAGAGATACTCGG...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATTTGAGAGTAGTGGGATaGAGCATCAGAAAGATAGAC +
Preference number: 4 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDLRVVG*SIRKID
Trigger: GTCTATCTTTCTGATGCTCCATCCCACTACTCTCAA...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTATGCCTGATTAAGGTGTaGAATGAACACTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLCLIKV*NEHSSS
Trigger: GGAAGAAGAGTGTTCATTTCACACCTTAATCAGGCA...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR TCA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCTTTTTAGGAAGTACTTaGGTCATGAAAGCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFFLGST*VMKALV
Trigger: AACTAGGGCTTTCATGACTCAAGTACTTCCTAAAAA...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTGAAAGTTATGCATTATaGGGCAAGCATTTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTESYAL*GKHFEK
Trigger: CTTCTCAAAATGCTTGCCTCATAATGCATAACTTTC...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTAAGACCAGAGTCAAAGTaGAAGTTATGCATTATGAGG +
Preference number: 4 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLRPESK*KLCIMR
Trigger: CCTCATAATGCATAACTTTCACTTTGACTCTGGTCT...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTATCAGTTGTTGAAGTATaGCATGAGAAGCAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLSVVEV*HEKQRS
Trigger: GGACCTTTGCTTCTCATGGCATACTTCAACAACTGA...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCAACTTAGTATTGCATTaGTATACCAACAACAAACGC +
Preference number: 4 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCNLVLH*YTNNKR
Trigger: GCGTTTGTTGTTGGTATACCAATGCAATACTAAGTT...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTCATTCCTGGGGTGGTTaGTATACTATAGAAATATTG +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTHSWGG*YTIEIL
Trigger: CAATATTTCTATAGTATACCAACCACCCCAGGAATG...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGAGTGCATTCCTGGGGTaGTTGGTATACTATAGAAAT +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLSAFLG*LVYYRN
Trigger: ATTTCTATAGTATACCAACCACCCCAGGAATGCACT...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CCA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTCATTGCTGTGTATTTaGGTATGGCATTTTGACAAC +
Preference number: 4 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTSLLCI*VWHFDN
Trigger: GTTGTCAAAATGCCATACCCAAATACACAGCAATGA...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCGGCTTATGCATTATGTaGATTACTTGTGTGCCATTC +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCGLCIM*ITCVPF
Trigger: GAATGGCACACAAGTAATCCACATAATGCATAAGCC...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGGGCTTATGCATTATGTaGATTACTTGTGTGCCATTC +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLGLCIM*ITCVPF
Trigger: GAATGGCACACAAGTAATCCACATAATGCATAAGCC...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR CAA 72 bp GCTTATGCATTATGTGGATTACTTGTGTGCCATTCATaGCTGTGTATTTGGGTATGGCATTTTGACAACGAA +
Preference number: 4 (lower is better)
Translates to: AYALCGLLVCHS*LCIWVWHFDNE
Trigger: TTCGTTGTCAAAATGCCATACCCAAATACACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
3UTR CAA 72 bp GGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTaGGTGTGGCTTATGCATTATGTGGATTACTTGTGT +
Preference number: 4 (lower is better)
Translates to: GLIWSRFKLSLV*VWLMHYVDYLC
Trigger: ACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR TCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGTTTTTAGGAAGTACTTaGGTCATGAAAGCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLFLGST*VMKALV
Trigger: AACTAGGGCTTTCATGACTCAAGTACTTCCTAAAAA...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCAAGGCCCTTAGTGGATaGTTGCATTATTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCKALSG*LHYFQI
Trigger: TATTTGGAAATAATGCAAGCATCCACTAAGGGCCTT...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTAGGTTGGAGTACTGGTaGTTTACCAAACAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSRLEYW*FTKQSY
Trigger: GTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCT...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTACTTTGTTCTCGTGGTTaGTTTAAAGTGGTTGGTAGT +
Preference number: 4 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLLCSRG*FKVVGS
Trigger: ACTACCAACCACTTTAAACCAACCACGAGAACAAAG...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGGGGTATGGACTCATTTaGAGCAGATTTAAATTGAGT +
Preference number: 4 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLGYGLI*SRFKLS
Trigger: ACTCAATTTAAATCTGCTCCAAATGAGTCCATACCC...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCGGGTATGGACTCATTTaGAGCAGATTTAAATTGAGT +
Preference number: 4 (lower is better)
Translates to: FEKGERLKIIPLRADDKCGYGLI*SRFKLS
Trigger: ACTCAATTTAAATCTGCTCCAAATGAGTCCATACCC...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR GCA 90 bp AGCTTAAAGGCCCTTAGTGGATGCTTGCATTATTTCCAAATAATTGAACATGAAAAGGGGCTTCAAGCTTaGTTGGATTTAAAATCAAGG +
Preference number: 4 (lower is better)
Translates to: SLKALSGCLHYFQIIEHEKGLQA*LDLKSR
Trigger: CCTTGATTTTAAATCCAAGCAAGCTTGAAGCCCCTT...TTCATGTTCAATTATTTGGAAATAATGCAAGCATCCACTAAGGGCCTTTAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR GCA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTTGTGGATTACTTGTGTaGCATTCATTGCTGTGTATT +
Preference number: 4 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSCGLLV*HSLLCI
Trigger: AATACACAGCAATGAATGGCACACAAGTAATCCACA...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CCA 90 bp CCTATAGTAAACATGTTTGTTAGGTTGTGCTTTTTCCAAGAGTGGCTAACAATGCTGTGTATTTGGGTATaGCATTTTGACAACGAAAGT +
Preference number: 4 (lower is better)
Translates to: PIVNMFVRLCFFQEWLTMLCIWV*HFDNES
Trigger: ACTTTCGTTGTCAAAATGCCATACCCAAATACACAG...CATTGTTAGCCACTCTTGGAAAAAGCACAACCTAACAAACATGTTTACTATAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
3UTR CAA 72 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTaGGAGTACTGGTGCTTTACCAAACAAAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: IKSNEDNRLSGR*EYWCFTKQSYF
Trigger: AAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS CCA 90 bp AGGGCCTGCCGGGCCTGGGCTCTCTGGCCAGCCCCGTCCTGGCCCTaGGGGACGGCCCTGCACCCTGCTTGTGTAGCAGCCCACAGCACT +
Preference number: 5 (lower is better)
Translates to: RACRAWALWPAPSWP*GTALHPACVAAHST
Trigger: AGTGCTGTGGGCTGCTACACAAGCAGGGTGCAGGGCCGTCCCCCAGGGCCAGGACGGGGCTGGCCAGAGAGCCCAGGCCCGGCAGGCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS TCA 90 bp TCCCACAGTCCAGGCCGCTGTCCGGGCTCCGGGTGGCCGAGCGGCTaGACCGACAGCCCCTGTCTTCCAGAAGGAAGTCCTCCACGTGGG +
Preference number: 5 (lower is better)
Translates to: SHSPGRCPGSGWPSG*TDSPCLPEGSPPRG
Trigger: CCCACGTGGAGGACTTCCTTCTGGAAGACAGGGGCTGTCGGTTCAGCCGCTCGGCCACCCGGAGCCCGGACAGCGGCCTGGACTGTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS GCA 90 bp CGATGGATGGGACTGTCACGGGCCGGGACCTCTGAGGACCAGCGCTaGCACGGGGAAACCTCCGGCCCATGTGATCCACCCGTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RWMGLSRAGTSEDQR*HGETSGPCDPPVLQ
Trigger: CTGCAGGACGGGTGGATCACATGGGCCGGAGGTTTCCCCGTGGCAGCGCTGGTCCTCAGAGGTCCCGGCCCGTGACAGTCCCATCCATCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp ACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCGGAAGCCACCACCACGTCCTaGCCCACCAGCAGCGTGCAC +
Preference number: 5 (lower is better)
Translates to: TGRWAWRTEAPACHQAAEATTTS*PTSSVH
Trigger: GTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGC...TTCCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp CGAGCTGCCCCTGCTGGTGACGCACTGCACGGAGATGCGGTAGGTGCAGGCTGCGAGGCTGCAGCCACTTaGCCACCAGGAGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: RAAPAGDALHGDAVGAGCEAAAT*PPGGSG
Trigger: CCCTGACCCTCCTGGTGGCAAAGTGGCTGCAGCCTC...GCAGCCTGCACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp CGAGCTGCCCCTGCTGGTGACGCACTGCACGGAGATGCGGTAGGTGCAGGCTGCCCCAGCAGGTCAATCTaGCCAGCGTGCTGCCGGAAC +
Preference number: 5 (lower is better)
Translates to: RAAPAGDALHGDAVGAGCPSRSI*PACCRN
Trigger: GTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGG...GCAGCCTGCACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp CACGGACTCGCCCTGGGCGGAGAGGGTCCGCACGGTCACGCCCTTGGCCTCCAGGTTCTCCAGCTTGGCTaGGAGCTGGTGTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: HGLALGGEGPHGHALGLQVLQLG*ELVFLL
Trigger: AAGGAGAAACACCAGCTCCAAGCCAAGCTGGAGAAC...CTGGAGGCCAAGGGCGTGACCGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp ACTCATGGCCGCGTCCACTCACGGGAAAAGCATCGCCAAGCACGCCGGGCAGGGCGTTCCCCAGCGTGCTaGCCAACCGCGACTCGTTGT +
Preference number: 5 (lower is better)
Translates to: THGRVHSREKHRQARRAGRSPAC*PTATRC
Trigger: ACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACG...CCCTGCCCGGCGTGCTTGGCGATGCTTTTCCCGTGAGTGGACGCGGCCATGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647475.1
CDS-3UTR CAA 90 bp GCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCGTAACGTTTGCGCCATaGGACAGCCCGGTGGGCGTC +
Preference number: 5 (lower is better)
Translates to: ATGSRQEGGLGGQRLRPVVTFAP*DSPVGV
Trigger: GACGCCCACCGGGCTGTCCAATGGCGCAAACGTTAC...GACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp AGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGGTGACGCACTGCACGCTCCTTCTTCTCCCTTaGCTCCAGCGGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SSVHCSSSELPLLVTHCTLLLLP*LQRELP
Trigger: TGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAGGAG...CGTGCAGTGCGTCACCAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp GCACGATGTCTTCTCCGATGTCGTCGATGTTCACGTCCAGGGTCCCGGCACTGTTCCCGGGCCATGGCCTaGGCGACGGTGGTGGACACC +
Preference number: 5 (lower is better)
Translates to: ARCLLRCRRCSRPGSRHCSRAMA*ATVVDT
Trigger: GGTGTCCACCACCGTCGCCAAGGCCATGGCCCGGGA...ACAGTGCCGGGACCCTGGACGTGAACATCGACGACATCGGAGAAGACATCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp GGGGGTCCTGCAGGCAACGTGGAGAACTCCACAAAGGCCTCCTTCTTCTCCCTTGACAGGAAGGTGGGCTaGGCGGACAGAGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: GGPAGNVENSTKASFFSLDRKVG*ADRGSG
Trigger: GCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTC...AAGGGAGAAGAAGGAGGCCTTTGTGGAGTTCTCCACGTTGCCTGCAGGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp GCACGATGTCTTCTCCGATGTCGTCGATGTTCACGTCCAGGGTCCCGGCACTGTGACAGGAAGGTGGGCTaGGCGGACAGAGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: ARCLLRCRRCSRPGSRHCDRKVG*ADRGSG
Trigger: GCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTC...ACAGTGCCGGGACCCTGGACGTGAACATCGACGACATCGGAGAAGACATCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp ATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCCAACCGCGACTCGTaGTCCTGCACAAAGTCCACG +
Preference number: 5 (lower is better)
Translates to: ISTGRWAWRTEAPACHQAANRDS*SCTKST
Trigger: CGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGC...AGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp ACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTGCGGAAGTGCAGGCTGCCATGTaGAGCTTCTCGATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: TGRWAWRTEAPACHQAAEVQAAM*SFSMRA
Trigger: AGCCCTCATCGAGAAGCTCAACATGGCAGCCTGCAC...TTCCGCAGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp CGAGCTGCCCCTGCTGGTGACGCACTGCACGGAGATGCGGTAGGTGCAGGCTGCTCGAACTCCTCCTCGTaGAGGAAGATGACGTGGCTG +
Preference number: 5 (lower is better)
Translates to: RAAPAGDALHGDAVGAGCSNSSS*RKMTWL
Trigger: CAGCCACGTCATCTTCCTCAACGAGGAGGAGTTCGA...GCAGCCTGCACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp GGTGGTGTGGGGCCTACGGAGGGCAATGGGCCTCTGCCTGAGAATGCTGCGGGATCCAGCTCTCGAACCTaGGACTCTAGCAGCCGCACT +
Preference number: 5 (lower is better)
Translates to: GGVGPTEGNGPLPENAAGSSSRT*DSSSRT
Trigger: AGTGCGGCTGCTAGAGTCCAAGGTTCGAGAGCTGGA...TCCCGCAGCATTCTCAGGCAGAGGCCCATTGCCCTCCGTAGGCCCCACACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp ATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTTTGTACCTGGCGGCCTaGACGATGTCGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: ISTGRWAWRTEAPACHQALYLAA*TMSNSS
Trigger: GGAGGAGTTCGACATCGTCAAGGCCGCCAGGTACAA...AGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGTCCCGGGCCATGGCCTaGGCGACGGTGGTGGACACC +
Preference number: 5 (lower is better)
Translates to: HLPNQSLDNESRLPAVTESRAMA*ATVVDT
Trigger: GGTGTCCACCACCGTCGCCAAGGCCATGGCCCGGGA...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TCATCCATCCTGGCGTGGGGACCCAGGTGCTCGTCTTTGGTTTCGGGGACTCCACATGCTGCCGGGCCCTaGTGGGAAGGCCTGCATGAT +
Preference number: 5 (lower is better)
Translates to: SSILAWGPRCSSLVSGTPHAAGP*WEGLHD
Trigger: ATCATGCAGGCCTTCCCACAAGGGCCCGGCAGCATG...TGGAGTCCCCGAAACCAAAGACGAGCACCTGGGTCCCCACGCCAGGATGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp CCAGGAGAGCTGGGCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGTCTAGGTTCTCCAGCTaGGCTTGGAGCTGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: PGELGGDLRDVVHPQVGGSRFSS*AWSWCF
Trigger: GAAACACCAGCTCCAAGCCAAGCTGGAGAACCTAGA...CCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGCCCAGCTCTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp GCGGGAGCTGCCACGGCATCTGGTGGGGTTTGGCCAGAACCTTCACCTTATAGGAACTGTGGGAAAGGCTaGCTGGGGGCCGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: AGAATASGGVWPEPSPYRNCGKG*LGAVEM
Trigger: CATCTCCACGGCCCCCAGCAAGCCTTTCCCACAGTT...CCTATAAGGTGAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp TCCTTGCCCACCAGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGGTGACTCAGATCTGCATCTaGCGCTACCGGATCTCGACA +
Preference number: 5 (lower is better)
Translates to: SLPTSSVHCSSSELPLLVTQICI*RYRIST
Trigger: TGTCGAGATCCGGTAGCGCAAGATGCAGATCTGAGT...CACCAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp TTGCCGAGGGAGGTGGCTAGGCCATTCATGAACTGTGGGAAAGGCTTGCTGGGGCGTTCCCCAGCGTGCTaGCCAACCGCGACTCGTTGT +
Preference number: 5 (lower is better)
Translates to: LPREVARPFMNCGKGLLGRSPAC*PTATRC
Trigger: ACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACG...CCCCAGCAAGCCTTTCCCACAGTTCATGAATGGCCTAGCCACCTCCCTCGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp CAGATCTGCATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAAGGGTCCCGGCACTGTaGTCGGTGATGCCCGCATCT +
Preference number: 5 (lower is better)
Translates to: QICILRYRISTGRWAWRTRVPAL*SVMPAS
Trigger: AGATGCGGGCATCACCGACAACAGTGCCGGGACCCT...TGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCAGATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGGCCACCACCACGTCCTaGCCCACCAGCAGCGTGCAC +
Preference number: 5 (lower is better)
Translates to: HLPNQSLDNESRLPAVTEATTTS*PTSSVH
Trigger: GTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGC...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CGCGCTGCCACCCAGCAGGTCAATCTTGCCAGCGTGCTGCCGGAACTTCTCCAGTCGAACTCCTCCTCGTaGAGGAAGATGACGTGGCTG +
Preference number: 5 (lower is better)
Translates to: RAATQQVNLASVLPELLQSNSSS*RKMTWL
Trigger: CAGCCACGTCATCTTCCTCAACGAGGAGGAGTTCGA...CTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGTGGCAGCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp ACCCAGCAGGTCAATCTTGCCAGCGTGCTGCCGGAACTTCTCCAGGTCCCGGGACCCAGGTGCTCGTCTTaGGTTTCGGGGACTCCAGAA +
Preference number: 5 (lower is better)
Translates to: TQQVNLASVLPELLQVPGPRCSS*VSGTPE
Trigger: TTCTGGAGTCCCCGAAACCAAAGACGAGCACCTGGG...TCCCGGGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp AGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGGTGACGCACTGCACGCCTTTCTATTGGACTTaGGCTTGGGAGGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SSVHCSSSELPLLVTHCTPFYWT*AWEEVR
Trigger: CCTCACCTCCTCCCAAGCCAAAGTCCAATAGAAAGG...CGTGCAGTGCGTCACCAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp GGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGACAGGAAGGTGGGCTaGGCGGACAGAGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: GLPEPIDDVGDPEWRWTVDRKVG*ADRGSG
Trigger: GCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTC...CACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GCTCCCCAGCGTGAGGTTCATGCGTGTCTCCTTGTCCACCAGGACGTTGTAGCTGCCAACCGCGACTCGTaGTCCTGCACAAAGTCCACG +
Preference number: 5 (lower is better)
Translates to: APQREVHACLLVHQDVVAANRDS*SCTKST
Trigger: CGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGC...AGCTACAACGTCCTGGTGGACAAGGAGACACGCATGAACCTCACGCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp CAGATCTGCATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGATCTGCGTGATGTaGTCCACCCGCAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: QICILRYRISTGRWAWRTEICVM*STRRWE
Trigger: CTCCCACCTGCGGGTGGACAACATCACGCAGATCTC...TGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCAGATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp GATGTTCACGTCCAGGGTCCCGGCACTGTTGTCGGTGATGCCCGCATCTATGTGCTCCTTCTTCTCCCTTaGCTCCAGCGGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: DVHVQGPGTVVGDARIYVLLLLP*LQRELP
Trigger: TGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAGGAG...CACATAGATGCGGGCATCACCGACAACAGTGCCGGGACCCTGGACGTGAACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS TCA 90 bp GCCTTCACCTTGTCATGCTGCCGGGCCCTTGTGGGAAGGCCTGCATaGTGGGATCTCAGGAGATACTCTCCCTGGGTGGCATCCTTCAGT +
Preference number: 5 (lower is better)
Translates to: AFTLSCCRALVGRPA*WDLRRYSPWVASFS
Trigger: ACTGAAGGATGCCACCCAGGGAGAGTATCTCCTGAGATCCCATCATGCAGGCCTTCCCACAAGGGCCCGGCAGCATGACAAGGTGAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000541840.2
CDS-3UTR CAA 90 bp GCCCAGGACTCATGGCCGCGTCCACTCACGGGAAAAGCATCGCCAAGCACGCCGGTTGAACTGCTCACTTaGAGTCCGGCATTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: AQDSWPRPLTGKASPSTPVELLT*SPAFLF
Trigger: GAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAAC...CGGCGTGCTTGGCGATGCTTTTCCCGTGAGTGGACGCGGCCATGAGTCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647475.1
CDS-3UTR CAA 90 bp CCAGGAGAGCTGGGCGGAGATCTGCGTGATGTTGTCCACCCGCAGGTGGGAGGGCTCTGCTTGGAGGTATaGGAATTCCGTTCATTCTCC +
Preference number: 5 (lower is better)
Translates to: PGELGGDLRDVVHPQVGGLCLEV*EFRSFS
Trigger: GGAGAATGAACGGAATTCCAATACCTCCAAGCAGAG...CCCTCCCACCTGCGGGTGGACAACATCACGCAGATCTCCGCCCAGCTCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp AACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCTCTGCTTGGAGGAGGGTCCCGGCACTGTaGTCGGTGATGCCCGCATCT +
Preference number: 5 (lower is better)
Translates to: NYSGQHRGGPSPSISAWRRVPAL*SVMPAS
Trigger: AGATGCGGGCATCACCGACAACAGTGCCGGGACCCT...CCTCCAAGCAGAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp GCTCCCCAGCGTGAGGTTCATGCGTGTCTCCTTGTCCACCAGGACGTTGTAGCTTTGTACCTGGCGGCCTaGACGATGTCGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: APQREVHACLLVHQDVVALYLAA*TMSNSS
Trigger: GGAGGAGTTCGACATCGTCAAGGCCGCCAGGTACAA...AGCTACAACGTCCTGGTGGACAAGGAGACACGCATGAACCTCACGCTGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp TCCCCGAGTATCTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGCGCACGGTCACGCCCTaGGCCTCCAGGCTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: SPSISAWRYWNSVHSPCLRTVTP*ASRLRS
Trigger: GCTGCGGAGCCTGGAGGCCAAGGGCGTGACCGTGCG...CAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp GCTCCCCAGCGTGAGGTTCATGCGTGTCTCCTTGTCCACCAGGACGTTGTAGCTTCCAGCTCTCGAACCTaGGACTGCGTCAGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: APQREVHACLLVHQDVVASSSRT*DCVRSC
Trigger: GCAGCTTCTGACGCAGTCCAAGGTTCGAGAGCTGGA...AGCTACAACGTCCTGGTGGACAAGGAGACACGCATGAACCTCACGCTGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647475.1
CDS CCA 90 bp TCCTCCATGATGTCTGAGAGGTCAGACCCCCGGCTGCTCTCTGTGTaGTACTCGTCTCCATGGCAACAGTGCGGCTGCTTGCCAAGTTCA +
Preference number: 5 (lower is better)
Translates to: SSMMSERSDPRLLSV*YSSPWQQCGCLPSS
Trigger: TGAACTTGGCAAGCAGCCGCACTGTTGCCATGGAGACGAGTACCACACAGAGAGCAGCCGGGGGTCTGACCTCTCAGACATCATGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000643940.1
ENST00000644209.1
CDS-3UTR CAA 90 bp GATGTTCACGTCCAGGGTCCCGGCACTGTTGTCGGTGATGCCCGCATCTATGTGAGGGTGAGCGGATGGTaGAGATGCACATACTCTGCC +
Preference number: 5 (lower is better)
Translates to: DVHVQGPGTVVGDARIYVRVSGW*RCTYSA
Trigger: GGCAGAGTATGTGCATCTCAACCATCCGCTCACCCT...CACATAGATGCGGGCATCACCGACAACAGTGCCGGGACCCTGGACGTGAACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp ACGTCCTTGCCCACCAGCAGCGTGCACTGCAGCTCATCCGAGCTGCCCCTGCTGCCCACAATAACACTTTaGGCGAGTTGTTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: TSLPTSSVHCSSSELPLLPTITL*ASCLMR
Trigger: CCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGG...CAGCAGGGGCAGCTCGGATGAGCTGCAGTGCACGCTGCTGGTGGGCAAGGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp ACTCATGGCCGCGTCCACTCACGGGAAAAGCATCGCCAAGCACGCCGGGCAGGGCCCACAATAACACTTTaGGCGAGTTGTTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: THGRVHSREKHRQARRAGPTITL*ASCLMR
Trigger: CCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGG...CCCTGCCCGGCGTGCTTGGCGATGCTTTTCCCGTGAGTGGACGCGGCCATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647475.1
CDS-3UTR CAA 90 bp GGCGTGGAAACAGGTCTTCTTCAGGCCTCGGTTCAATCTAATTCCAGCTCTGTTGCCACCACCACGTCCTaGCCCACCAGCAGCGTGCAC +
Preference number: 5 (lower is better)
Translates to: GVETGLLQASVQSNSSSVATTTS*PTSSVH
Trigger: GTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGC...AACAGAGCTGGAATTAGATTGAACCGAGGCCTGAAGAAGACCTGTTTCCACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp GCACGCCAGAGAGAGGCCCCAGACATAAATGTGTGGGTTCCGTTTCTCTGTCTCCTCCTTCTTCTCCCTTaGCTCCAGCGGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: ARQREAPDINVWVPFLCLLLLLP*LQRELP
Trigger: TGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAGGAG...GAGACAGAGAAACGGAACCCACACATTTATGTCTGGGGCCTCTCTCTGGCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp TACATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCCGCACGGTCACGCCCTaGGCCTCCAGGCTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: YIDLAVVRKHMNHFTAPSRTVTP*ASRLRS
Trigger: GCTGCGGAGCCTGGAGGCCAAGGGCGTGACCGTGCG...GCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTCGCACGGTCACGCCCTaGGCCTCCAGGCTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVRTVTP*ASRLRS
Trigger: GCTGCGGAGCCTGGAGGCCAAGGGCGTGACCGTGCG...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TGTCACCAGGCTGCGGAAGGGGCCGGATATATTCACCGATCGCAGAGCTGCCTCCGGGGACTCCAGAACTaGCTAATGGCTTTGATTGGG +
Preference number: 5 (lower is better)
Translates to: CHQAAEGAGYIHRSQSCLRGLQN*LMALIG
Trigger: CCCAATCAAAGCCATTAGCAAGTTCTGGAGTCCCCG...GAGGCAGCTCTGCGATCGGTGAATATATCCGGCCCCTTCCGCAGCCTGGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS TCA 90 bp CTGCATTTCAGAATACAGCTCCTCCTCGTCCTCCTCCATGATGTCTaGGAGGTCAGACCCCCGGCTGCTCTCTGTGTGGTACTCGTCTCC +
Preference number: 5 (lower is better)
Translates to: LHFRIQLLLVLLHDV*EVRPPAALCVVLVS
Trigger: GGAGACGAGTACCACACAGAGAGCAGCCGGGGGTCTGACCTCTCAGACATCATGGAGGAGGACGAGGAGGAGCTGTATTCTGAAATGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000643940.1
ENST00000644209.1
CDS TCA 90 bp CACAAAGATCCGGGCCGGGAGCTCTTCGGCACCAGGGTCAGTTTCTaGCTCTTCATAGAAGTCTGGAGAAAGGCGGTCTCGCCCGTAATC +
Preference number: 5 (lower is better)
Translates to: HKDPGRELFGTRVSF*LFIEVWRKAVSPVI
Trigger: GATTACGGGCGAGACCGCCTTTCTCCAGACTTCTATGAAGAGTCAGAAACTGACCCTGGTGCCGAAGAGCTCCCGGCCCGGATCTTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000536632.1
ENST00000643940.1
CDS TCA 90 bp CTGCGAGCAAGTGGGGGTGAAGAACAGAGCGGCAGTGAGCCTAACTaGGGAGCGTGCACGGGAAATGCAGCTTTGGAAAGCAGTGAGGAT +
Preference number: 5 (lower is better)
Translates to: LRASGGEEQSGSEPN*GACTGNAALESSED
Trigger: ATCCTCACTGCTTTCCAAAGCTGCATTTCCCGTGCACGCTCCTCAGTTAGGCTCACTGCCGCTCTGTTCTTCACCCCCACTTGCTCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536632.1
CDS-3UTR CAA 90 bp CGGAAGGGGCCGGATATATTCACCGATCGCAGAGCTGCCTCCAATAGCGCTCTCTCAATTTCCTGCTGCTaGGCACTGAGAACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: RKGPDIFTDRRAASNSALSISCC*ALRTAR
Trigger: CCTGGCTGTTCTCAGTGCCAAGCAGCAGGAAATTGA...GAGAGCGCTATTGGAGGCAGCTCTGCGATCGGTGAATATATCCGGCCCCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp ATCGAAGGGGTTGTAACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTAGAGATCTGCGTGATGTaGTCCACCCGCAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: IEGVVTIAGNTEVDLPRVEICVM*STRRWE
Trigger: CTCCCACCTGCGGGTGGACAACATCACGCAGATCTC...TACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTTACAACCCCTTCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp CAGATCTGCATCTTGCGCTACCGGATCTCGACAGGAAGGTGGGCTTGGCGGACATTGAAGAACTGGTACTaGTACCTGGCGGCCTTGACG +
Preference number: 5 (lower is better)
Translates to: QICILRYRISTGRWAWRTLKNWY*YLAALT
Trigger: CGTCAAGGCCGCCAGGTACAAGTACCAGTTCTTCAA...TGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCAGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp ATCTCGACAGGAAGGTGGGCTTGGCGGACAGAGGCTCCGGCCTGTCACCAGGCTATGTTGGGCCTGAGATaGAAGAACTGGTACTTGTAC +
Preference number: 5 (lower is better)
Translates to: ISTGRWAWRTEAPACHQAMLGLR*KNWYLY
Trigger: GTACAAGTACCAGTTCTTCAATCTCAGGCCCAACAT...AGCCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTGGCATCTGGTGGGGTTaGGCCAGAACCTTCACCTTA +
Preference number: 5 (lower is better)
Translates to: SLDNESRLPAVTESNRSSGIWWG*ARTFTL
Trigger: TAAGGTGAAGGTTCTGGCCAAACCCCACCAGATGCC...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TCCCTCCAGGCCGATGCCGGAATGGTTGATGAAGTTCTGATCCTGCTCGTTCCCGGCATCTGGTGGGGTTaGGCCAGAACCTTCACCTTA +
Preference number: 5 (lower is better)
Translates to: SLQADAGMVDEVLILLVPGIWWG*ARTFTL
Trigger: TAAGGTGAAGGTTCTGGCCAAACCCCACCAGATGCC...GGGAACGAGCAGGATCAGAACTTCATCAACCATTCCGGCATCGGCCTGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGATGGAGGGATGGAGCTCTCCTaGCTGTACCTGAACCCTCAG +
Preference number: 5 (lower is better)
Translates to: EPIDDVGDPEWRWTVGDGGMELS*LYLNPQ
Trigger: CTGAGGGTTCAGGTACAGCAAGGAGAGCTCCATCCC...TCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
CDS-3UTR CAA 90 bp TCGATGTTCACGTCCAGGGTCCCGGCACTGTTGTCGGTGATGCCCGCATCTATGGGAAGCCCCTTTCTATaGGACTTTGGCTTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: SMFTSRVPALLSVMPASMGSPFL*DFGLGG
Trigger: TCCTCCCAAGCCAAAGTCCAATAGAAAGGGGCTTCC...CATAGATGCGGGCATCACCGACAACAGTGCCGGGACCCTGGACGTGAACATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS GCA 90 bp CTCTTCATAGAAGTCTGGAGAAAGGCGGTCTCGCCCGTAATCGTCTaGGAGCAAGTGGGGGTGAAGAACAGAGCGGCAGTGAGCCTAACT +
Preference number: 5 (lower is better)
Translates to: LFIEVWRKAVSPVIV*EQVGVKNRAAVSLT
Trigger: AGTTAGGCTCACTGCCGCTCTGTTCTTCACCCCCACTTGCTCGCAGACGATTACGGGCGAGACCGCCTTTCTCCAGACTTCTATGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536632.1
CDS-3UTR CAA 90 bp CCAGCATGTGCCCATGCACAGGGCCAGGTGCACGGCTCTGCTCCCAGGCCTCATCTTTTGGCGAGTTGTTaGATGAGGGTGATTTTTCTA +
Preference number: 5 (lower is better)
Translates to: PACAHAQGQVHGSAPRPHLLASC*MRVIFL
Trigger: TAGAAAAATCACCCTCATCAAACAACTCGCCAAAAG...ATGAGGCCTGGGAGCAGAGCCGTGCACCTGGCCCTGTGCATGGGCACATGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp TGCCATGTTGAGCTTCTCGATGAGGGCTTTAGTTCTGCTCCCCAGCGTGAGGTTGTGCAGGCTGCCATGTaGAGCTTCTCGATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: CHVELLDEGFSSAPQREVVQAAM*SFSMRA
Trigger: AGCCCTCATCGAGAAGCTCAACATGGCAGCCTGCAC...AACCTCACGCTGGGGAGCAGAACTAAAGCCCTCATCGAGAAGCTCAACATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp CAGGGTTACTTAAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTGTAACGTTTGCGCCATaGGACAGCCCGGTGGGCGTC +
Preference number: 5 (lower is better)
Translates to: QGYLRKTRSGHSSQCLECVTFAP*DSPVGV
Trigger: GACGCCCACCGGGCTGTCCAATGGCGCAAACGTTAC...ACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAAGTAACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTCGGGGACTCCAGAACTaGCTAATGGCTTTGATTGGG +
Preference number: 5 (lower is better)
Translates to: SLDNESRLPAVTESNRSSRGLQN*LMALIG
Trigger: CCCAATCAAAGCCATTAGCAAGTTCTGGAGTCCCCG...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTTCTCTCTAGGAAGACGCTCCTTTTCTCTAACCTGCTGCTCTCGGCCACCCTCCTATTGGACTTTGGCTaGGGAGGAGGTGAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: LLSRKTLLFSNLLLSATLLLDFG*GGGEAA
Trigger: TGCAGCCTCACCTCCTCCCAAGCCAAAGTCCAATAG...GAGGGTGGCCGAGAGCAGCAGGTTAGAGAAAAGGAGCGTCTTCCTAGAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGCAGGAGGAACCCTTTTaGCCTTTGAGCGCATTGGCG +
Preference number: 5 (lower is better)
Translates to: HLPNQSLDNESRLPAVTEQEEPF*PLSALA
Trigger: CGCCAATGCGCTCAAAGGCAAAAAGGGTTCCTCCTG...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CAA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTACAGTCCTTGAGGGCATaGTGGGACGTGCCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVQSLRA*WDVPLG
Trigger: GCCCAGCGGCACGTCCCACAATGCCCTCAAGGACTG...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS CCA 90 bp TCCTTCACGGCCAAATCGCGCTCTCTGGTCACGAGGGTGAGCGGATaGTTGAGATGCACATACTCTGCCTTCACCACAAAGTTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: SFTAKSRSLVTRVSG*LRCTYSAFTTKFLC
Trigger: GCAGAGAAACTTTGTGGTGAAGGCAGAGTATGTGCATCTCAACCATCCGCTCACCCTCGTGACCAGAGAGCGCGATTTGGCCGTGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CAA 90 bp GGCGTGGAAACAGGTCTTCTTCAGGCCTCGGTTCAATCTAATTCCAGCTCTGTTAACTGTGGGAAAGGCTaGCTGGGGGCCGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: GVETGLLQASVQSNSSSVNCGKG*LGAVEM
Trigger: CATCTCCACGGCCCCCAGCAAGCCTTTCCCACAGTT...AACAGAGCTGGAATTAGATTGAACCGAGGCCTGAAGAAGACCTGTTTCCACGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGATGGAACTCAGATCTGCATCTaGCGCTACCGGATCTCGACA +
Preference number: 5 (lower is better)
Translates to: EPIDDVGDPEWRWTVGDGTQICI*RYRIST
Trigger: TGTCGAGATCCGGTAGCGCAAGATGCAGATCTGAGT...TCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GCACGATGTCTTCTCCGATGTCGTCGATGTTCACGTCCAGGGTCCCGGCACTGTCTCTGCTTGGAGGTATaGGAATTCCGTTCATTCTCC +
Preference number: 5 (lower is better)
Translates to: ARCLLRCRRCSRPGSRHCLCLEV*EFRSFS
Trigger: GGAGAATGAACGGAATTCCAATACCTCCAAGCAGAG...ACAGTGCCGGGACCCTGGACGTGAACATCGACGACATCGGAGAAGACATCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTAACGTTTGCGCCATaGGACAGCCCGGTGGGCGTC +
Preference number: 5 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVVTFAP*DSPVGV
Trigger: GACGCCCACCGGGCTGTCCAATGGCGCAAACGTTAC...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGCGGGGACTCCAGAACTaGCTAATGGCTTTGATTGGG +
Preference number: 5 (lower is better)
Translates to: LPEPIDDVGDPEWRWTVGRGLQN*LMALIG
Trigger: CCCAATCAAAGCCATTAGCAAGTTCTGGAGTCCCCG...CCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp AAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTTCAGAGCCAACCCCAGGTGCTCGTCTTaGGTTTCGGGGACTCCAGAA +
Preference number: 5 (lower is better)
Translates to: KENTFWPLEPVFGVFRANPRCSS*VSGTPE
Trigger: TTCTGGAGTCCCCGAAACCAAAGACGAGCACCTGGG...GTTGGCTCTGAACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGCACTCGAGCCAGTGTTaGGAGTGTTCAGAGCCAACA +
Preference number: 5 (lower is better)
Translates to: HLPNQSLDNESRLPAVTEHSSQC*ECSEPT
Trigger: TGTTGGCTCTGAACACTCCAAACACTGGCTCGAGTG...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp TCCGTTCATTCTCCATGTCTGACTCAGATCTGCATCTTGCGCTACCGGATCTCGGATGTCGGGGAGGCCTaGGATTCTACTGGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: SVHSPCLTQICILRYRISDVGEA*DSTGSE
Trigger: CTCAGACCCAGTAGAATCCAAGGCCTCCCCGACATC...CGAGATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACATGGAGAATGAACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp AAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTTCAGAGCCAACAGGGTGAGCGGATGGTaGAGATGCACATACTCTGCC +
Preference number: 5 (lower is better)
Translates to: KENTFWPLEPVFGVFRANRVSGW*RCTYSA
Trigger: GGCAGAGTATGTGCATCTCAACCATCCGCTCACCCT...GTTGGCTCTGAACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GTACCTGGCGGCCTTGACGATGTCGAACTCCTCCTCGTTGAGGAAGATGACGTGGTTGAACTGCTCACTTaGAGTCCGGCATTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: VPGGLDDVELLLVEEDDVVELLT*SPAFLF
Trigger: GAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAAC...CACGTCATCTTCCTCAACGAGGAGGAGTTCGACATCGTCAAGGCCGCCAGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp GGAATGGTTGATGAAGTTCTGATCCTGCTCGTTCCCCAGCGTGCTTGCCAACCGCCCGAGTATCTCTGCTaGGAGGTATTGGAATTCCGT +
Preference number: 5 (lower is better)
Translates to: GMVDEVLILLVPQRACQPPEYLC*EVLEFR
Trigger: ACGGAATTCCAATACCTCCAAGCAGAGATACTCGGG...CGGTTGGCAAGCACGCTGGGGAACGAGCAGGATCAGAACTTCATCAACCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGCCCGAGTATCTCTGCTaGGAGGTATTGGAATTCCGT +
Preference number: 5 (lower is better)
Translates to: HLPNQSLDNESRLPAVTEPEYLC*EVLEFR
Trigger: ACGGAATTCCAATACCTCCAAGCAGAGATACTCGGG...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp AACTATAGCGGGCAACACAGAGGTGGACCTTCCCCGAGTATCTCTGCTTGGAGGCCCGAGTATCTCTGCTaGGAGGTATTGGAATTCCGT +
Preference number: 5 (lower is better)
Translates to: NYSGQHRGGPSPSISAWRPEYLC*EVLEFR
Trigger: ACGGAATTCCAATACCTCCAAGCAGAGATACTCGGG...CCTCCAAGCAGAGATACTCGGGGAAGGTCCACCTCTGTGTTGCCCGCTATAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp CAGGGTTACTTAAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTGTGCAGGCTGCCATGTaGAGCTTCTCGATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: QGYLRKTRSGHSSQCLECVQAAM*SFSMRA
Trigger: AGCCCTCATCGAGAAGCTCAACATGGCAGCCTGCAC...ACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAAGTAACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGCTGGACGGTAACATCTaGTGGGGGTGCTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKLDGNI*WGCWGS
Trigger: GGACCCCCAGCACCCCCACAAGATGTTACCGTCCAG...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CCTCTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGAAACTTGCTAATGGCTTaGATTGGGGTGCAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: PLPGLPEPIDDVGDPEWRNLLMA*IGVQVS
Trigger: CGAGACCTGCACCCCAATCAAAGCCATTAGCAAGTT...TCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAACTTGCTAATGGCTTaGATTGGGGTGCAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: HLPNQSLDNESRLPAVTENLLMA*IGVQVS
Trigger: CGAGACCTGCACCCCAATCAAAGCCATTAGCAAGTT...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTGCCTCGACATCGACGTaGGGCGAGCTTTCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLASTST*GELSLG
Trigger: CCCCAGAGAAAGCTCGCCCAACGTCGATGTCGAGGC...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
CDS-3UTR CAA 90 bp AGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAGCAACCGCTCCTCTTTGCCTTTGAGCGCATaGGCGTATCTTGAGAGTAGT +
Preference number: 5 (lower is better)
Translates to: SLDNESRLPAVTESNRSSLPLSA*AYLESS
Trigger: ACTACTCTCAAGATACGCCAATGCGCTCAAAGGCAA...AGAGGAGCGGTTGCTCTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GTACCTGGCGGCCTTGACGATGTCGAACTCCTCCTCGTTGAGGAAGATGACGTGTGGGTTTTCTGTCGCTaGAAACCAAGAGTGCTAACG +
Preference number: 5 (lower is better)
Translates to: VPGGLDDVELLLVEEDDVWVFCR*KPRVLT
Trigger: CGTTAGCACTCTTGGTTTCAAGCGACAGAAAACCCA...CACGTCATCTTCCTCAACGAGGAGGAGTTCGACATCGTCAAGGCCGCCAGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp GTTCCCCAGCGTGCTTGCCAACCGCGACTCGTTGTCCTGCACAAAGTCCACGAAGTGTTAATAGCATGCTaGGCCAAACAGACTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VPQRACQPRLVVLHKVHEVLIAC*AKQTSS
Trigger: AGAGGAAGTCTGTTTGGCCAAGCATGCTATTAACAC...TTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTATACTCTGCCTTCACCTaGTCATGCTGCCGGGCCCTT +
Preference number: 5 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVYSAFT*SCCRAL
Trigger: AAGGGCCCGGCAGCATGACAAGGTGAAGGCAGAGTA...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp AAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTTCAGAGCCAACGTTCTCCAGCTTGGCTaGGAGCTGGTGTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: KENTFWPLEPVFGVFRANVLQLG*ELVFLL
Trigger: AAGGAGAAACACCAGCTCCAAGCCAAGCTGGAGAAC...GTTGGCTCTGAACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp TCCGTTCATTCTCCATGTCTGACTCAGATCTGCATCTTGCGCTACCGGATCTCGTCAATTTCCTGCTGCTaGGCACTGAGAACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SVHSPCLTQICILRYRISSISCC*ALRTAR
Trigger: CCTGGCTGTTCTCAGTGCCAAGCAGCAGGAAATTGA...CGAGATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACATGGAGAATGAACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp TCCGTTCATTCTCCATGTCTGACTCAGATCTGCATCTTGCGCTACCGGATCTCGTTGAAGAACTGGTACTaGTACCTGGCGGCCTTGACG +
Preference number: 5 (lower is better)
Translates to: SVHSPCLTQICILRYRISLKNWY*YLAALT
Trigger: CGTCAAGGCCGCCAGGTACAAGTACCAGTTCTTCAA...CGAGATCCGGTAGCGCAAGATGCAGATCTGAGTCAGACATGGAGAATGAACGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATTCCCGGGCCATGGCCTaGGCGACGGTGGTGGACACC +
Preference number: 5 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDSRAMA*ATVVDT
Trigger: GGTGTCCACCACCGTCGCCAAGGCCATGGCCCGGGA...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CAGGGTTACTTAAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTCAACAGTGCGGCTGCTaGCCAAGTTCAGAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: QGYLRKTRSGHSSQCLECQQCGC*PSSEPF
Trigger: GAAAGGCTCTGAACTTGGCAAGCAGCCGCACTGTTG...ACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTTAAGTAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGATGGACTTCTTCCAAGAAGTTaGAGGGCACAAGGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: EPIDDVGDPEWRWTVGDGLLPRS*RAQGLS
Trigger: AGAAAGGCCTTGTGCCCTCAAACTTCTTGGAAGAAG...TCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
CDS-3UTR CAA 90 bp GCTCTCCTTGCTGTACCTGAACCCTCAGGAGGAACCCTTTTTGCCTTTGAGCGCTTGCCTTTGAGCGCATaGGCGTATCTTGAGAGTAGT +
Preference number: 5 (lower is better)
Translates to: ALLAVPEPSGGTLFAFERLPLSA*AYLESS
Trigger: ACTACTCTCAAGATACGCCAATGCGCTCAAAGGCAA...GCGCTCAAAGGCAAAAAGGGTTCCTCCTGAGGGTTCAGGTACAGCAAGGAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540658.1
CDS-3UTR CAA 90 bp AAGGAAAACACGTTCTGGCCACTCGAGCCAGTGTTTGGAGTGTTCAGAGCCAACCGGCTTTCTGGAAGGTaGGAGTACTGGTGCTTTACC +
Preference number: 5 (lower is better)
Translates to: KENTFWPLEPVFGVFRANRLSGR*EYWCFT
Trigger: GGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCG...GTTGGCTCTGAACACTCCAAACACTGGCTCGAGTGGCCAGAACGTGTTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CCTCTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGAGAACCCTTTTTGCCTTaGAGCGCATTGGCGTATCTT +
Preference number: 5 (lower is better)
Translates to: PLPGLPEPIDDVGDPEWREPFLP*SALAYL
Trigger: AAGATACGCCAATGCGCTCAAAGGCAAAAAGGGTTC...TCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540658.1
CDS-3UTR CAA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGCGGTCTCCCAAAGCTaGGGTCTGATCGAATGTGGC +
Preference number: 5 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVAVSQS*GLIECG
Trigger: GCCACATTCGATCAGACCCAAGCTTTGGGAGACCGC...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS GCA 90 bp AGTCATACAGGGCCACCATTCTCCGCGTCGATACCGAATGACGCCTaGCACTTCTCCTGCTTCTCTCTATTTTCTCCACAGGTGTATTCA +
Preference number: 5 (lower is better)
Translates to: SHTGPPFSASIPNDA*HFSCFSLFSPQVYS
Trigger: TGAATACACCTGTGGAGAAAATAGAGAGAAGCAGGAGAAGTGGCAGGCGTCATTCGGTATCGACGCGGAGAATGGTGGCCCTGTATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000536632.1
ENST00000643940.1
CDS-3UTR CAA 90 bp GGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGTTGAACTGCTCACTTaGAGTCCGGCATTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: GLPEPIDDVGDPEWRWTVVELLT*SPAFLF
Trigger: GAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAAC...CACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GCTCCCCAGCGTGAGGTTCATGCGTGTCTCCTTGTCCACCAGGACGTTGTAGCTCTTTTGGCGAGTTGTTaGATGAGGGTGATTTTTCTA +
Preference number: 5 (lower is better)
Translates to: APQREVHACLLVHQDVVALLASC*MRVIFL
Trigger: TAGAAAAATCACCCTCATCAAACAACTCGCCAAAAG...AGCTACAACGTCCTGGTGGACAAGGAGACACGCATGAACCTCACGCTGGGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTAGCCACCACCACGTCCTaGCCCACCAGCAGCGTGCAC +
Preference number: 5 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLATTTS*PTSSVH
Trigger: GTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGC...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTATCGAACTCCTCCTCGTaGAGGAAGATGACGTGGCTG +
Preference number: 5 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVSNSSS*RKMTWL
Trigger: CAGCCACGTCATCTTCCTCAACGAGGAGGAGTTCGA...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTTTGTACCTGGCGGCCTaGACGATGTCGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVLYLAA*TMSNSS
Trigger: GGAGGAGTTCGACATCGTCAAGGCCGCCAGGTACAA...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GCCCACAATAACACTTTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTACTGGACGGTAACATCTaGTGGGGGTGCTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: AHNNTFGELFDEGDFSRVLDGNI*WGCWGS
Trigger: GGACCCCCAGCACCCCCACAAGATGTTACCGTCCAG...TACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGCCCAGGTGCTCGTCTTaGGTTTCGGGGACTCCAGAA +
Preference number: 5 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKPRCSS*VSGTPE
Trigger: TTCTGGAGTCCCCGAAACCAAAGACGAGCACCTGGG...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTAACAACAAACGCGTGTaGCAGCAACTTCTGTCACAG +
Preference number: 5 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPNNKRV*QQLLSQ
Trigger: CTGTGACAGAAGTTGCTGCAACACGCGTTTGTTGTT...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGATGGATCTCCAGAGCAACTCTaGCCATGTGAGTGTTTAGTA +
Preference number: 5 (lower is better)
Translates to: EPIDDVGDPEWRWTVGDGSPEQL*PCECLV
Trigger: TACTAAACACTCACATGGCAAGAGTTGCTCTGGAGA...TCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp TGGCGTATCTTGAGAGTAGTGGGATGGAGCATCAGAAAGATAGACTTCTACGTCGGGATGGAGCTCTCCTaGCTGTACCTGAACCCTCAG +
Preference number: 5 (lower is better)
Translates to: WRILRVVGWSIRKIDFYVGMELS*LYLNPQ
Trigger: CTGAGGGTTCAGGTACAGCAAGGAGAGCTCCATCCC...GACGTAGAAGTCTATCTTTCTGATGCTCCATCCCACTACTCTCAAGATACGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540658.1
CDS-3UTR CAA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTAGCAGTTTCTTGCCTTaGGAAAGCAGCCCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPSSFLP*ESSPFF
Trigger: GAAAAAGGGGCTGCTTTCCAAAGGCAAGAAACTGCT...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS TCA 90 bp CTGTCGCTTGAAACCAAGAGTGCTAACGAACGTCATCGTCAACTGTaGAAGCATGGGACACTTCCTAAAGTGCGGACACTGGAGGTTGGT +
Preference number: 5 (lower is better)
Translates to: LSLETKSANERHRQL*KHGTLPKVRTLEVG
Trigger: ACCAACCTCCAGTGTCCGCACTTTAGGAAGTGTCCCATGCTTTCACAGTTGACGATGACGTTCGTTAGCACTCTTGGTTTCAAGCGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTCCCAGCAGGTCAATCTaGCCAGCGTGCTGCCGGAAC +
Preference number: 5 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTPSRSI*PACCRN
Trigger: GTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGG...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCAACTGTGGGAAAGGCTaGCTGGGGGCCGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCNCGKG*LGAVEM
Trigger: CATCTCCACGGCCCCCAGCAAGCCTTTCCCACAGTT...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAGACAGGAAGGTGGGCTaGGCGGACAGAGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLDRKVG*ADRGSG
Trigger: GCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTC...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TCCCCGAGTATCTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGACTCAGATCTGCATCTaGCGCTACCGGATCTCGACA +
Preference number: 5 (lower is better)
Translates to: SPSISAWRYWNSVHSPCLTQICI*RYRIST
Trigger: TGTCGAGATCCGGTAGCGCAAGATGCAGATCTGAGT...CAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp GCCGTTGCTTTGGCAAAGCTAAGGCAGGTAATAATTCACTTCATAAATGAAGACCGTTCCCCAGCGTGCTaGCCAACCGCGACTCGTTGT +
Preference number: 5 (lower is better)
Translates to: AVALAKLRQVIIHFINEDRSPAC*PTATRC
Trigger: ACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACG...GTCTTCATTTATGAAGTGAATTATTACCTGCCTTAGCTTTGCCAAAGCAACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTAGGGTCCCGGCACTGTaGTCGGTGATGCCCGCATCT +
Preference number: 5 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFRVPAL*SVMPAS
Trigger: AGATGCGGGCATCACCGACAACAGTGCCGGGACCCT...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTCCCACAATAACACTTTaGGCGAGTTGTTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPPTITL*ASCLMR
Trigger: CCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGG...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCGAGATCTGCGTGATGTaGTCCACCCGCAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCEICVM*STRRWE
Trigger: CTCCCACCTGCGGGTGGACAACATCACGCAGATCTC...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTTCGAACTCCTCCTCGTaGAGGAAGATGACGTGGCTG +
Preference number: 5 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLSNSSS*RKMTWL
Trigger: CAGCCACGTCATCTTCCTCAACGAGGAGGAGTTCGA...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GGCCAGAACCTTCACCTTATAGGCCATGTTGGGCCTGAGATTGAAGAACTGGTAAACTTGCTAATGGCTTaGATTGGGGTGCAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: GQNLHLIGHVGPEIEELVNLLMA*IGVQVS
Trigger: CGAGACCTGCACCCCAATCAAAGCCATTAGCAAGTT...TACCAGTTCTTCAATCTCAGGCCCAACATGGCCTATAAGGTGAAGGTTCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTGCGCATTGGCGTATCTaGAGAGTAGTGGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLAHWRI*RVVGWS
Trigger: GCTCCATCCCACTACTCTCAAGATACGCCAATGCGC...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
CDS-3UTR CAA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTGCGCATTGGCGTATCTaGAGAGTAGTGGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVAHWRI*RVVGWS
Trigger: GCTCCATCCCACTACTCTCAAGATACGCCAATGCGC...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGAACAACAGAATTCACTaGGTAACATCGTACTGTCCC +
Preference number: 5 (lower is better)
Translates to: HLPNQSLDNESRLPAVTENNRIH*VTSYCP
Trigger: GGGACAGTACGATGTTACCAAGTGAATTCTGTTGTT...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp TACATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCGCTATGCGCCCCCGTTaGTTAATAAGACGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: YIDLAVVRKHMNHFTAPSAMRPR*LIRRPL
Trigger: GAGGGGACGTCTTATTAACAAACGGGGGCGCATAGC...GCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GCCCACAATAACACTTTTGGCGAGTTGTTTGATGAGGGTGATTTTTCTAGGGTATACTCTGCCTTCACCTaGTCATGCTGCCGGGCCCTT +
Preference number: 5 (lower is better)
Translates to: AHNNTFGELFDEGDFSRVYSAFT*SCCRAL
Trigger: AAGGGCCCGGCAGCATGACAAGGTGAAGGCAGAGTA...TACCCTAGAAAAATCACCCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGTCTAGGTTCTCCAGCTaGGCTTGGAGCTGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKSRFSS*AWSWCF
Trigger: GAAACACCAGCTCCAAGCCAAGCTGGAGAACCTAGA...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGTCAATTTCCTGCTGCTaGGCACTGAGAACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKSISCC*ALRTAR
Trigger: CCTGGCTGTTCTCAGTGCCAAGCAGCAGGAAATTGA...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TACATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTCCAGCTCTCGAACCTaGGACTTCTGCAGAAGGTCA +
Preference number: 5 (lower is better)
Translates to: YIDLAVVRKHMNHFTAPSSSSRT*DFCRRS
Trigger: TGACCTTCTGCAGAAGTCCAAGGTTCGAGAGCTGGA...GCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTACGTTCCCCAGCGTGCTaGCCAACCGCGACTCGTTGT +
Preference number: 5 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLRSPAC*PTATRC
Trigger: ACAACGAGTCGCGGTTGGCAAGCACGCTGGGGAACG...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTAGGGTCCCGGCACTGTaGTCGGTGATGCCCGCATCT +
Preference number: 5 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFRVPAL*SVMPAS
Trigger: AGATGCGGGCATCACCGACAACAGTGCCGGGACCCT...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGTTGAAGAACTGGTACTaGTACCTGGCGGCCTTGACG +
Preference number: 5 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKLKNWY*YLAALT
Trigger: CGTCAAGGCCGCCAGGTACAAGTACCAGTTCTTCAA...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTGCCTCGACATCGACGTaGGGCGAGCTTTCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFASTST*GELSLG
Trigger: CCCCAGAGAAAGCTCGCCCAACGTCGATGTCGAGGC...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCGCCTCGACATCGACGTaGGGCGAGCTTTCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: FEKGERLKIIPLRADDKCASTST*GELSLG
Trigger: CCCCAGAGAAAGCTCGCCCAACGTCGATGTCGAGGC...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTACAGGATGATTGTGCTTaGAGGAGGAGCATAGCTCTC +
Preference number: 5 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVQDDCA*RRSIAL
Trigger: GAGAGCTATGCTCCTCCTCAAAGCACAATCATCCTG...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGGATGGAGCATTCCTGGGGTGGTaGGTATACTATAGAAATATT +
Preference number: 5 (lower is better)
Translates to: EPIDDVGDPEWRWTVGDGAFLGW*VYYRNI
Trigger: AATATTTCTATAGTATACCAACCACCCCAGGAATGC...TCCATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CTACAGGTGATAGCTATGCGCCCCCGTTTGTTAATAAGACGTCCCCTCCCACCTTGGAGCAGATTTAAATaGAGTCTGGTTTTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LQVIAMRPRLLIRRPLPPWSRFK*SLVLVW
Trigger: CCACACCAAAACCAGACTCAATTTAAATCTGCTCCA...AGGTGGGAGGGGACGTCTTATTAACAAACGGGGGCGCATAGCTATCACCTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS TCA 90 bp CTGGGTCTGAGGCCAGCAGATTTGAGCCCTGGATCTAGCCATGTCTaGAGCCACATTTTCAGTGATGGGCACAAAAACAATTTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: LGLRPADLSPGSSHV*SHIFSDGHKNNFLF
Trigger: AAACAGGAAATTGTTTTTGTGCCCATCACTGAAAATGTGGCTTCAGACATGGCTAGATCCAGGGCTCAAATCTGCTGGCCTCAGACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS-3UTR CAA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTCCCAGCAGGTCAATCTaGCCAGCGTGCTGCCGGAAC +
Preference number: 5 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSPSRSI*PACCRN
Trigger: GTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGG...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTAACTGTGGGAAAGGCTaGCTGGGGGCCGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFNCGKG*LGAVEM
Trigger: CATCTCCACGGCCCCCAGCAAGCCTTTCCCACAGTT...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATGCCAACCGCGACTCGTaGTCCTGCACAAAGTCCACG +
Preference number: 5 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDANRDS*SCTKST
Trigger: CGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGC...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCGAGATCTGCGTGATGTaGTCCACCCGCAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: FEKGERLKIIPLRADDKCEICVM*STRRWE
Trigger: CTCCCACCTGCGGGTGGACAACATCACGCAGATCTC...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTACTGGACGGTAACATCTaGTGGGGGTGCTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLLDGNI*WGCWGS
Trigger: GGACCCCCAGCACCCCCACAAGATGTTACCGTCCAG...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTAAAATCTTGAGGGCATaGTGGGACGTGCCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTKILRA*WDVPLG
Trigger: GCCCAGCGGCACGTCCCACAATGCCCTCAAGATTTT...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTACTTCTTCCAAGAAGTTaGAGGGCACAAGGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVLLPRS*RAQGLS
Trigger: AGAAAGGCCTTGTGCCCTCAAACTTCTTGGAAGAAG...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCAAGCATGTGCCTGAGTaGGCAGTGCAGCAGCATTCC +
Preference number: 5 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCKHVPE*AVQQHS
Trigger: GGAATGCTGCTGCACTGCCAACTCAGGCACATGCTT...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CACCTCCCAAATCAGAGCTTGGACAATGAGAGCAGACTGCCAGCGGTGACAGAGGCCCTTAGTGGATGCTaGCATTATTTCCAAATAATT +
Preference number: 5 (lower is better)
Translates to: HLPNQSLDNESRLPAVTEALSGC*HYFQII
Trigger: AATTATTTGGAAATAATGCAAGCATCCACTAAGGGC...CTCTGTCACCGCTGGCAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGACTGTGGGGTATACTATAGAAATATaGGAGATGGCACACTGGTTG +
Preference number: 5 (lower is better)
Translates to: LPEPIDDVGDPEWRWTVGYTIEI*EMAHWL
Trigger: CAACCAGTGTGCCATCTCCAATATTTCTATAGTATA...CCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTGGGATGGAGCTCTCCTaGCTGTACCTGAACCCTCAG +
Preference number: 5 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFGMELS*LYLNPQ
Trigger: CTGAGGGTTCAGGTACAGCAAGGAGAGCTCCATCCC...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TACATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCCTCCCAAATCAGAGCTaGGACAATGAGAGCAGACTG +
Preference number: 5 (lower is better)
Translates to: YIDLAVVRKHMNHFTAPSLPNQS*DNESRL
Trigger: CAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAG...GCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTGACACCCCGAAAATCTaGGTGCTCGGTGGGCTCGCC +
Preference number: 5 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSDTPKI*VLGGLA
Trigger: GGCGAGCCCACCGAGCACCAAGATTTTCGGGGTGTC...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS TCA 90 bp TTCTCCACAGGTGTATTCAGAGGGAGAAAGCCCTGTCTAAGAAGCTaGTCCATCATCTCCTCATCATCTGCTTGTATCTCAGAGACCATG +
Preference number: 5 (lower is better)
Translates to: FSTGVFRGRKPCLRS*SIISSSSACISETM
Trigger: CATGGTCTCTGAGATACAAGCAGATGATGAGGAGATGATGGATCAGCTTCTTAGACAGGGCTTTCTCCCTCTGAATACACCTGTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000536632.1
ENST00000643940.1
CDS GCA 90 bp GAGAAAGCCCTGTCTAAGAAGCTGATCCATCATCTCCTCATCATCTaGTTGTATCTCAGAGACCATGTTACAAGGAATAAGGCCAAGCCG +
Preference number: 5 (lower is better)
Translates to: EKALSKKLIHHLLII*LYLRDHVTRNKAKP
Trigger: CGGCTTGGCCTTATTCCTTGTAACATGGTCTCTGAGATACAAGCAGATGATGAGGAGATGATGGATCAGCTTCTTAGACAGGGCTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000536632.1
ENST00000643940.1
CDS-3UTR CAA 90 bp GACAGAGAGCAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTACCCACAATAACACTTTaGGCGAGTTGTTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: DREQPLLFVLVVGLKWLVPTITL*ASCLMR
Trigger: CCTCATCAAACAACTCGCCAAAAGTGTTATTGTGGG...TACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTGCTCTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTAGTGCAGGCTGCCATGTaGAGCTTCTCGATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLVQAAM*SFSMRA
Trigger: AGCCCTCATCGAGAAGCTCAACATGGCAGCCTGCAC...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTTTGTACCTGGCGGCCTaGACGATGTCGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFLYLAA*TMSNSS
Trigger: GGAGGAGTTCGACATCGTCAAGGCCGCCAGGTACAA...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTGGCATCTGGTGGGGTTaGGCCAGAACCTTCACCTTA +
Preference number: 5 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCGIWWG*ARTFTL
Trigger: TAAGGTGAAGGTTCTGGCCAAACCCCACCAGATGCC...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTCTCCTTCTTCTCCCTTaGCTCCAGCGGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSLLLLP*LQRELP
Trigger: TGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAGGAG...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCCAACAGTGCGGCTGCTaGCCAAGTTCAGAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFQQCGC*PSSEPF
Trigger: GAAAGGCTCTGAACTTGGCAAGCAGCCGCACTGTTG...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCGGGTTCCCTAAAATCTaGAGGGCATTGTGGGACGTG +
Preference number: 5 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCGFPKI*RALWDV
Trigger: CACGTCCCACAATGCCCTCAAGATTTTAGGGAACCC...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGGGGGTGGCCGTTGCTTaGGCAAAGCTAAGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLGVAVA*AKLRQV
Trigger: TACCTGCCTTAGCTTTGCCAAAGCAACGGCCACCCC...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTAGCAGTTTCTTGCCTTaGGAAAGCAGCCCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLSSFLP*ESSPFF
Trigger: GAAAAAGGGGCTGCTTTCCAAAGGCAAGAAACTGCT...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
CDS-3UTR CAA 90 bp TACATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCAGCAGTTTCTTGCCTTaGGAAAGCAGCCCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: YIDLAVVRKHMNHFTAPSSSFLP*ESSPFF
Trigger: GAAAAAGGGGCTGCTTTCCAAAGGCAAGAAACTGCT...GCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
CDS-3UTR CAA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCGCTATGCGCCCCCGTTaGTTAATAAGACGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFAMRPR*LIRRPL
Trigger: GAGGGGACGTCTTATTAACAAACGGGGGCGCATAGC...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CAACCGCTCCTCTTTGTTCTCGTGGTTGGTTTAAAGTGGTTGGTAGTGCAAAAGCACAGCCTGTACAACTaGATCTCAAACCACTGTGTC +
Preference number: 5 (lower is better)
Translates to: QPLLFVLVVGLKWLVVQKHSLYN*ISNHCV
Trigger: GACACAGTGGTTTGAGATCAAGTTGTACAGGCTGTG...CTTTTGCACTACCAACCACTTTAAACCAACCACGAGAACAAAGAGGAGCGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCTCCAGCTCTCGAACCTaGGACTCTAGCAGCCGCACT +
Preference number: 5 (lower is better)
Translates to: FEKGERLKIIPLRADDKCSSSRT*DSSSRT
Trigger: AGTGCGGCTGCTAGAGTCCAAGGTTCGAGAGCTGGA...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CAA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGTGGTCAGTGCAGTCCTaGAGGGCATTGTGGGACGTG +
Preference number: 5 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLWSVQS*RALWDV
Trigger: CACGTCCCACAATGCCCTCAAGGACTGCACTGACCA...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CAA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTTCTAGGTTCTCCAGCTaGGCTTGGAGCTGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCSRFSS*AWSWCF
Trigger: GAAACACCAGCTCCAAGCCAAGCTGGAGAACCTAGA...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCACTCAGATCTGCATCTaGCGCTACCGGATCTCGACA +
Preference number: 5 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFTQICI*RYRIST
Trigger: TGTCGAGATCCGGTAGCGCAAGATGCAGATCTGAGT...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp AGCTTAAAGGCCCTTAGTGGATGCTTGCATTATTTCCAAATAATTGAACATGAAGCCAACCGCGACTCGTaGTCCTGCACAAAGTCCACG +
Preference number: 5 (lower is better)
Translates to: SLKALSGCLHYFQIIEHEANRDS*SCTKST
Trigger: CGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGC...TTCATGTTCAATTATTTGGAAATAATGCAAGCATCCACTAAGGGCCTTTAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CTCTGCTTGGAGGTATTGGAATTCCGTTCATTCTCCATGTCTGACTCAGATCTGATGTTGGGCCTGAGATaGAAGAACTGGTACTTGTAC +
Preference number: 5 (lower is better)
Translates to: LCLEVLEFRSFSMSDSDLMLGLR*KNWYLY
Trigger: GTACAAGTACCAGTTCTTCAATCTCAGGCCCAACAT...CAGATCTGAGTCAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000647475.1
CDS-3UTR CAA 90 bp CATTGGCGTATCTTGAGAGTAGTGGGATGGAGCATCAGAAAGATAGACTTCTACCTTCTTCCAAGAAGTTaGAGGGCACAAGGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: HWRILRVVGWSIRKIDFYLLPRS*RAQGLS
Trigger: AGAAAGGCCTTGTGCCCTCAAACTTCTTGGAAGAAG...GTAGAAGTCTATCTTTCTGATGCTCCATCCCACTACTCTCAAGATACGCCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540658.1
CDS TCA 90 bp AGAAAGATAGACTTCTACGTCATCAGGCACTTCTTCCAAGAAGTTTaGGGGCACAAGGCCTTTCTGCCCATTCAGCTCCCCATAATAAAA +
Preference number: 5 (lower is better)
Translates to: RKIDFYVIRHFFQEV*GHKAFLPIQLPIIK
Trigger: TTTTATTATGGGGAGCTGAATGGGCAGAAAGGCCTTGTGCCCTCAAACTTCTTGGAAGAAGTGCCTGATGACGTAGAAGTCTATCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000540658.1
ENST00000643940.1
CDS-3UTR CAA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAGGGTGAGCGGATGGTaGAGATGCACATACTCTGCC +
Preference number: 5 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLRVSGW*RCTYSA
Trigger: GGCAGAGTATGTGCATCTCAACCATCCGCTCACCCT...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATGTTCTCCAGCTTGGCTaGGAGCTGGTGTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDVLQLG*ELVFLL
Trigger: AAGGAGAAACACCAGCTCCAAGCCAAGCTGGAGAAC...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTATCAATTTCCTGCTGCTaGGCACTGAGAACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLSISCC*ALRTAR
Trigger: CCTGGCTGTTCTCAGTGCCAAGCAGCAGGAAATTGA...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGTTGAAGAACTGGTACTaGTACCTGGCGGCCTTGACG +
Preference number: 5 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLLKNWY*YLAALT
Trigger: CGTCAAGGCCGCCAGGTACAAGTACCAGTTCTTCAA...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTGAAAATTACATAGATTaGGCAGTTGTCCGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLENYID*AVVRKH
Trigger: GTGCTTCCGGACAACTGCCAAATCTATGTAATTTTC...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000540658.1
CDS-3UTR CAA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTCTCCCAAATCAGAGCTaGGACAATGAGAGCAGACTG +
Preference number: 5 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCLPNQS*DNESRL
Trigger: CAGTCTGCTCTCATTGTCCAAGCTCTGATTTGGGAG...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATCGGCTTTCTGGAAGGTaGGAGTACTGGTGCTTTACC +
Preference number: 5 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDRLSGR*EYWCFT
Trigger: GGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCG...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCGAACCCTTTTTGCCTTaGAGCGCATTGGCGTATCTT +
Preference number: 5 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCEPFLP*SALAYL
Trigger: AAGATACGCCAATGCGCTCAAAGGCAAAAAGGGTTC...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS-3UTR CAA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTACCCGAGTATCTCTGCTaGGAGGTATTGGAATTCCGT +
Preference number: 5 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLPEYLC*EVLEFR
Trigger: ACGGAATTCCAATACCTCCAAGCAGAGATACTCGGG...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTCTTTTGGCGAGTTGTTaGATGAGGGTGATTTTTCTA +
Preference number: 5 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVLLASC*MRVIFL
Trigger: TAGAAAAATCACCCTCATCAAACAACTCGCCAAAAG...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCATGTTGGGCCTGAGATaGAAGAACTGGTACTTGTAC +
Preference number: 5 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCMLGLR*KNWYLY
Trigger: GTACAAGTACCAGTTCTTCAATCTCAGGCCCAACAT...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTGCCTTTGAGCGCATaGGCGTATCTTGAGAGTAGT +
Preference number: 5 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTLPLSA*AYLESS
Trigger: ACTACTCTCAAGATACGCCAATGCGCTCAAAGGCAA...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTATCGGTATCTTCAGTaGCTCACTTACGTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCYRYLQ*LTYVKA
Trigger: AGCCTTCACGTAAGTGAGCAACTGAAGATACCGATA...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GTAGGTACAGTGTTACAGTTTATTGAGTGTGTGAGCGCCAACAACAGAATTCACAGGTTGATAGTAAAGTaGGCCGAGTACCCATCAGTA +
Preference number: 5 (lower is better)
Translates to: VGTVLQFIECVSANNRIHRLIVK*AEYPSV
Trigger: TACTGATGGGTACTCGGCCAACTTTACTATCAACCT...GTGAATTCTGTTGTTGGCGCTCACACACTCAATAAACTGTAACACTGTACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CATAGATTTGGCAGTTGTCCGGAAGCACATGAATCATTTCACTGCACCCAGCTTGTTGGTTTAAAGTGGTaGGTAGTGCAAAAGTGCATT +
Preference number: 5 (lower is better)
Translates to: HRFGSCPEAHESFHCTQLVGLKW*VVQKCI
Trigger: AATGCACTTTTGCACTACCAACCACTTTAAACCAAC...AAGCTGGGTGCAGTGAAATGATTCATGTGCTTCCGGACAACTGCCAAATCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp TGGAGCAGATTTAAATTGAGTCTGGTTTTGGTGTGGCTTATGCATTATGTGGATGTTGAACTGCTCACTTaGAGTCCGGCATTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: WSRFKLSLVLVWLMHYVDVELLT*SPAFLF
Trigger: GAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAAC...ATCCACATAATGCATAAGCCACACCAAAACCAGACTCAATTTAAATCTGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTCTCCTCATCATCTGCTaGTATCTCAGAGACCATGTT +
Preference number: 5 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTLLIIC*YLRDHV
Trigger: AACATGGTCTCTGAGATACAAGCAGATGATGAGGAG...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTACACTCTTCTTCCTTTTaGCCTTTGAGCGCATTGGCG +
Preference number: 5 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLHSSSF*PLSALA
Trigger: CGCCAATGCGCTCAAAGGCAAAAAGGAAGAAGAGTG...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GTTGGTAGTGCAAAAGTGCATTTCTCTACTGGTGTCAGGGGAGAAGATTGGGTTCAACTTAGTATTGCATaGGTATACCAACAACAAACG +
Preference number: 5 (lower is better)
Translates to: VGSAKVHFSTGVRGEDWVQLSIA*VYQQQT
Trigger: CGTTTGTTGTTGGTATACCAATGCAATACTAAGTTG...AACCCAATCTTCTCCCCTGACACCAGTAGAGAAATGCACTTTTGCACTACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GCATTCCTGGGGTGGTTGGTATACTATAGAAATATTGGAGATGGCACACTGGTTTTGTTCTTTCAGTTGTaGAAGTATGCCATGAGAAGC +
Preference number: 5 (lower is better)
Translates to: AFLGWLVYYRNIGDGTLVLFFQL*KYAMRS
Trigger: GCTTCTCATGGCATACTTCAACAACTGAAAGAACAA...AACCAGTGTGCCATCTCCAATATTTCTATAGTATACCAACCACCCCAGGAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CCTATAGTAAACATGTTTGTTAGGTTGTGCTTTTTCCAAGAGTGGCTAACAATGCTCTGCTTGGAGGTATaGGAATTCCGTTCATTCTCC +
Preference number: 5 (lower is better)
Translates to: PIVNMFVRLCFFQEWLTMLCLEV*EFRSFS
Trigger: GGAGAATGAACGGAATTCCAATACCTCCAAGCAGAG...CATTGTTAGCCACTCTTGGAAAAAGCACAACCTAACAAACATGTTTACTATAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp CAGAATAGAACATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTCTCTGCTTGGAGGTATaGGAATTCCGTTCATTCTCC +
Preference number: 5 (lower is better)
Translates to: QNRTLKAMKIIGFLEGWSLCLEV*EFRSFS
Trigger: GGAGAATGAACGGAATTCCAATACCTCCAAGCAGAG...ACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAATGTTCTATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCCTTTTGGCGAGTTGTTaGATGAGGGTGATTTTTCTA +
Preference number: 5 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCLLASC*MRVIFL
Trigger: TAGAAAAATCACCCTCATCAAACAACTCGCCAAAAG...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTAATGTTGGGCCTGAGATaGAAGAACTGGTACTTGTAC +
Preference number: 5 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLMLGLR*KNWYLY
Trigger: GTACAAGTACCAGTTCTTCAATCTCAGGCCCAACAT...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAAATTGAGTCTGGTTTTGCTCCTCATCATCTGCTaGTATCTCAGAGACCATGTT +
Preference number: 5 (lower is better)
Translates to: DEDGYGLIWSRFKLSLVLLLIIC*YLRDHV
Trigger: AACATGGTCTCTGAGATACAAGCAGATGATGAGGAG...CAAAACCAGACTCAATTTAAATCTGCTCCAAATGAGTCCATACCCATCTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTATCTTCCTTTTTGCCTTaGAGCGCATTGGCGTATCTT +
Preference number: 5 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLSSFLP*SALAYL
Trigger: AAGATACGCCAATGCGCTCAAAGGCAAAAAGGAAGA...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTGGGCTTCAAGCTTGCTaGGATTTAAAATCAAGGTCT +
Preference number: 5 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCGLQAC*DLKSRS
Trigger: AGACCTTGATTTTAAATCCAAGCAAGCTTGAAGCCC...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp ATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTGAAAATTACATAGATTaGGCAGTTGTCCGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: IIGFLEGWSTGALPNKVTENYID*AVVRKH
Trigger: GTGCTTCCGGACAACTGCCAAATCTATGTAATTTTC...AGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCCTTGTGTGCCATTCATaGCTGTGTATTTGGGTATGG +
Preference number: 5 (lower is better)
Translates to: FEKGERLKIIPLRADDKCLVCHS*LCIWVW
Trigger: CCATACCCAAATACACAGCAATGAATGGCACACAAG...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp ATTAAAAGCAATGAAGATAATCGGCTTTCTGGAAGGTTGGAGTACTGGTGCTTTCTTGTGTGCCATTCATaGCTGTGTATTTGGGTATGG +
Preference number: 5 (lower is better)
Translates to: IKSNEDNRLSGRLEYWCFLVCHS*LCIWVW
Trigger: CCATACCCAAATACACAGCAATGAATGGCACACAAG...AAAGCACCAGTACTCCAACCTTCCAGAAAGCCGATTATCTTCATTGCTTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTTGGAGCAGATTTAAATaGAGTCTGGTTTTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCWSRFK*SLVLVW
Trigger: CCACACCAAAACCAGACTCAATTTAAATCTGCTCCA...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTACAAGGGGCTTCAAGCTaGCTTGGATTTAAAATCAAG +
Preference number: 5 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLQGASS*LGFKIK
Trigger: CTTGATTTTAAATCCAAGCAAGCTTGAAGCCCCTTG...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTGTTGGTTTAAAGTGGTaGGTAGTGCAAAAGTGCATT +
Preference number: 5 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCVGLKW*VVQKCI
Trigger: AATGCACTTTTGCACTACCAACCACTTTAAACCAAC...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp AGCTTAAAGGCCCTTAGTGGATGCTTGCATTATTTCCAAATAATTGAACATGAACACAGCCTGTACAACTaGATCTCAAACCACTGTGTC +
Preference number: 5 (lower is better)
Translates to: SLKALSGCLHYFQIIEHEHSLYN*ISNHCV
Trigger: GACACAGTGGTTTGAGATCAAGTTGTACAGGCTGTG...TTCATGTTCAATTATTTGGAAATAATGCAAGCATCCACTAAGGGCCTTTAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp TGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTCCATTATGTGGATTACTaGTGTGCCATTCATTGCTGT +
Preference number: 5 (lower is better)
Translates to: WKVGVLVLYQTKLLSLLFHYVDY*CAIHCC
Trigger: ACAGCAATGAATGGCACACAAGTAATCCACATAATG...GAAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTGGTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCAAATTGAGTCTGGTTTaGGTGTGGCTTATGCATTAT +
Preference number: 5 (lower is better)
Translates to: LVLVWLMHYVDYLCAIHCKLSLV*VWLMHY
Trigger: ATAATGCATAAGCCACACCAAAACCAGACTCAATTT...GCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTAAACATGTTTGTTAGGTaGTGCTTTTTCCAAGAGTGG +
Preference number: 5 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLNMFVR*CFFQEW
Trigger: CCACTCTTGGAAAAAGCACAACCTAACAAACATGTT...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS-3UTR CAA 90 bp TTTGTTCAAATGCCAATGATGAAGATGGGTATGGACTCATTTGGAGCAGATTTAGAAAATTACATAGATTaGGCAGTTGTCCGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: FVQMPMMKMGMDSFGADLENYID*AVVRKH
Trigger: GTGCTTCCGGACAACTGCCAAATCTATGTAATTTTC...TAAATCTGCTCCAAATGAGTCCATACCCATCTTCATCATTGGCATTTGAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTTTTGGGTATGGCATTTaGACAACGAAAGTAACAGAA +
Preference number: 5 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFFGYGI*TTKVTE
Trigger: TTCTGTTACTTTCGTTGTCAAAATGCCATACCCAAA...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GTTTTGGTGTGGCTTATGCATTATGTGGATTACTTGTGTGCCATTCATTGCTGTTTTGGGTATGGCATTTaGACAACGAAAGTAACAGAA +
Preference number: 5 (lower is better)
Translates to: VLVWLMHYVDYLCAIHCCFGYGI*TTKVTE
Trigger: TTCTGTTACTTTCGTTGTCAAAATGCCATACCCAAA...ACAGCAATGAATGGCACACAAGTAATCCACATAATGCATAAGCCACACCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp GTCAGGATGAAGACCACTGAATGCACGACACATACAAAGTATACACTGTTTTTACATTATGTGGATTACTaGTGTGCCATTCATTGCTGT +
Preference number: 5 (lower is better)
Translates to: VRMKTTECTTHTKYTLFLHYVDY*CAIHCC
Trigger: ACAGCAATGAATGGCACACAAGTAATCCACATAATG...TAAAAACAGTGTATACTTTGTATGTGTCGTGCATTCAGTGGTCTTCATCCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp CTGGAAGGTTGGAGTACTGGTGCTTTACCAAACAAAGTTACTTTCTCTCCTTTTAAATTGAGTCTGGTTTaGGTGTGGCTTATGCATTAT +
Preference number: 5 (lower is better)
Translates to: LEGWSTGALPNKVTFSPFKLSLV*VWLMHY
Trigger: ATAATGCATAAGCCACACCAAAACCAGACTCAATTT...AAAAGGAGAGAAAGTAACTTTGTTTGGTAAAGCACCAGTACTCCAACCTTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS-3UTR CAA 90 bp TTTGAGAAGGGAGAAAGGTTGAAAATCATTCCTTTAAGGGCAGATGACAAATGCCATTTGTTCTTTCAGTaGTTGAAGTATGCCATGAGA +
Preference number: 5 (lower is better)
Translates to: FEKGERLKIIPLRADDKCHLFFQ*LKYAMR
Trigger: TCTCATGGCATACTTCAACAACTGAAAGAACAAATG...GCATTTGTCATCTGCCCTTAAAGGAATGATTTTCAACCTTTCTCCCTTCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS CAA 90 bp CTGGCCAGCCCCGTCCTGGCCCTGGGGGACGGCCCTGCACCCTGCTaGTGTAGCAGCCCACAGCACTCTCCGTCCTCTTCCGCTACTTCG +
Preference number: 6 (lower is better)
Translates to: LASPVLALGDGPAPC*CSSPQHSPSSSATS
Trigger: CGAAGTAGCGGAAGAGGACGGAGAGTGCTGTGGGCTGCTACACAAGCAGGGTGCAGGGCCGTCCCCCAGGGCCAGGACGGGGCTGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS TCA 72 bp CCAGGCCGCTGTCCGGGCTCCGGGTGGCCGAGCGGCTaGACCGACAGCCCCTGTCTTCCAGAAGGAAGTCCT +
Preference number: 6 (lower is better)
Translates to: PGRCPGSGWPSG*TDSPCLPEGSP
Trigger: AGGACTTCCTTCTGGAAGACAGGGGCTGTCGGTTCAGCCGCTCGGCCACCCGGAGCCCGGACAGCGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS GCA 72 bp GGACTGTCACGGGCCGGGACCTCTGAGGACCAGCGCTaGCACGGGGAAACCTCCGGCCCATGTGATCCACCC +
Preference number: 6 (lower is better)
Translates to: GLSRAGTSEDQR*HGETSGPCDPP
Trigger: GGGTGGATCACATGGGCCGGAGGTTTCCCCGTGGCAGCGCTGGTCCTCAGAGGTCCCGGCCCGTGACAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS TCA 72 bp GGACCAGCGCTGCCACGGGGAAACCTCCGGCCCATGTaGTCCACCCGTCCTGCAGAGGCTGGGTTCCCTAAA +
Preference number: 6 (lower is better)
Translates to: GPALPRGNLRPM*STRPAEAGFPK
Trigger: TTTAGGGAACCCAGCCTCTGCAGGACGGGTGGATCACATGGGCCGGAGGTTTCCCCGTGGCAGCGCTGGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261655.8
ENST00000643940.1
CDS CCA 72 bp AGGGGGCCTTGTGCGACTCTGGGAGGTGGCTTTGCGTaGGGGGCAGCTGCCCTACTGTCGGGCATGGTTATG +
Preference number: 6 (lower is better)
Translates to: RGPCATLGGGFA*GAAALLSGMVM
Trigger: CATAACCATGCCCGACAGTAGGGCAGCTGCCCCCCACGCAAAGCCACCTCCCAGAGTCGCACAAGGCCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS GCA 72 bp ACAGCCAGGGCCTGGTCATGCTCCAACTGCAGCTGCTaGCGCCGTTCAGCCGCCTCTCGCATATGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: TARAWSCSNCSC*RRSAASRICFR
Trigger: CCTGAAGCATATGCGAGAGGCGGCTGAACGGCGGCAGCAGCTGCAGTTGGAGCATGACCAGGCCCTGGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261655.8
ENST00000535703.6
ENST00000541840.2
ENST00000544568.2
ENST00000643940.1
CDS GCA 72 bp AGAACAGCCAGGGCCTGGTCATGCTCCAACTGCAGCTaGTGCCGCCGTTCAGCCGCCTCTCGCATATGCTTC +
Preference number: 6 (lower is better)
Translates to: RTARAWSCSNCS*CRRSAASRICF
Trigger: GAAGCATATGCGAGAGGCGGCTGAACGGCGGCAGCAGCTGCAGTTGGAGCATGACCAGGCCCTGGCTGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261655.8
ENST00000535703.6
ENST00000541840.2
ENST00000544568.2
ENST00000643940.1
CDS CCA 72 bp GACCCCCGGCTGCTCTCTGTGTGGTACTCGTCTCCATaGCAACAGTGCGGCTGCTTGCCAAGTTCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: DPRLLSVWYSSP*QQCGCLPSSEP
Trigger: AGGCTCTGAACTTGGCAAGCAGCCGCACTGTTGCCATGGAGACGAGTACCACACAGAGAGCAGCCGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000643940.1
ENST00000644209.1
CDS CCA 72 bp GTTCGGCCTCGACATCGACGTTGGGCGAGCTTTCTCTaGGGTCGTAGTCATACAGGGCCACCATTCTCCGCG +
Preference number: 6 (lower is better)
Translates to: VRPRHRRWASFL*GRSHTGPPFSA
Trigger: CGCGGAGAATGGTGGCCCTGTATGACTACGACCCCAGAGAAAGCTCGCCCAACGTCGATGTCGAGGCCGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261655.8
ENST00000536632.1
ENST00000540658.1
ENST00000643940.1
CDS TCA 72 bp CCGGGCCGGGAGCTCTTCGGCACCAGGGTCAGTTTCTaGCTCTTCATAGAAGTCTGGAGAAAGGCGGTCTCG +
Preference number: 6 (lower is better)
Translates to: PGRELFGTRVSF*LFIEVWRKAVS
Trigger: CGAGACCGCCTTTCTCCAGACTTCTATGAAGAGTCAGAAACTGACCCTGGTGCCGAAGAGCTCCCGGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000536632.1
ENST00000643940.1
CDS GCA 72 bp AGTCTCTTCCTGTGGGGCTGGTGGGGAAACTCGGGCTaGTCCCAGAAAGTGCCTTCCGAGGTCCTATGGTCA +
Preference number: 6 (lower is better)
Translates to: SLFLWGWWGNSG*SQKVPSEVLWS
Trigger: TGACCATAGGACCTCGGAAGGCACTTTCTGGGAGCAGCCCGAGTTTCCCCACCAGCCCCACAGGAAGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS CCA 72 bp ATGTCTGAGAGGTCAGACCCCCGGCTGCTCTCTGTGTaGTACTCGTCTCCATGGCAACAGTGCGGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: MSERSDPRLLSV*YSSPWQQCGCL
Trigger: CAAGCAGCCGCACTGTTGCCATGGAGACGAGTACCACACAGAGAGCAGCCGGGGGTCTGACCTCTCAGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000643940.1
ENST00000644209.1
CDS GCA 72 bp CGCTCTCTGGTCACGAGGGTGAGCGGATGGTTGAGATaGACATACTCTGCCTTCACCTTGTCATGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: RSLVTRVSGWLR*TYSAFTLSCCR
Trigger: CCGGCAGCATGACAAGGTGAAGGCAGAGTATGTGCATCTCAACCATCCGCTCACCCTCGTGACCAGAGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000535703.6
ENST00000541840.2
CDS CAA 90 bp GCCGCCTCTCGCATATGCTTCAGGACCTGTTCTAGGTTCTCCAGCTaGGCTTGGAGCTGGTGTTTCTCCTTCACGGCCAAATCGCGCTCT +
Preference number: 6 (lower is better)
Translates to: AASRICFRTCSRFSS*AWSWCFSFTAKSRS
Trigger: AGAGCGCGATTTGGCCGTGAAGGAGAAACACCAGCTCCAAGCCAAGCTGGAGAACCTAGAACAGGTCCTGAAGCATATGCGAGAGGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261655.8
ENST00000535703.6
ENST00000541840.2
ENST00000544568.2
ENST00000643940.1
CDS TCA 72 bp AGTGGGGGTGAAGAACAGAGCGGCAGTGAGCCTAACTaGGGAGCGTGCACGGGAAATGCAGCTTTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: SGGEEQSGSEPN*GACTGNAALES
Trigger: GCTTTCCAAAGCTGCATTTCCCGTGCACGCTCCTCAGTTAGGCTCACTGCCGCTCTGTTCTTCACCCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536632.1
CDS CCA 72 bp ACTCTGCCTTCACCTTGTCATGCTGCCGGGCCCTTGTaGGAAGGCCTGCATGATGGGATCTCAGGAGATACT +
Preference number: 6 (lower is better)
Translates to: TLPSPCHAAGPL*EGLHDGISGDT
Trigger: AGTATCTCCTGAGATCCCATCATGCAGGCCTTCCCACAAGGGCCCGGCAGCATGACAAGGTGAAGGCAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000541840.2
CDS CAA 72 bp CATACTCTGCCTTCACCTTGTCATGCTGCCGGGCCCTaGTGGGAAGGCCTGCATGATGGGATCTCAGGAGAT +
Preference number: 6 (lower is better)
Translates to: HTLPSPCHAAGP*WEGLHDGISGD
Trigger: ATCTCCTGAGATCCCATCATGCAGGCCTTCCCACAAGGGCCCGGCAGCATGACAAGGTGAAGGCAGAGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535703.6
ENST00000541840.2
CDS CAA 72 bp AGGAAGTGGGAAATTTCCCCAGCGGTCTCCCAAAGCTaGGGTCTGATCGAATGTGGCCTCAGCACCTGCAGG +
Preference number: 6 (lower is better)
Translates to: RKWEISPAVSQS*GLIECGLSTCR
Trigger: CCTGCAGGTGCTGAGGCCACATTCGATCAGACCCAAGCTTTGGGAGACCGCTGGGGAAATTTCCCACTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541840.2
ENST00000643940.1
CDS GCA 72 bp CGGGCAGGGAAGATGCTATTCTCTAGAATACCTGCATaGTGTCCAAGGTGTTCTCTAGCAGCCGCACTGCGC +
Preference number: 6 (lower is better)
Translates to: RAGKMLFSRIPA*CPRCSLAAALR
Trigger: GCGCAGTGCGGCTGCTAGAGAACACCTTGGACAGCATGCAGGTATTCTAGAGAATAGCATCTTCCCTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647475.1
CDS GCA 72 bp GTCCGGCATTTCTCTTCCAGCTCTCGAACCTTGGACTaGATGCTGTCCAAGGTGTTCTCTAGCAGCCGCACT +
Preference number: 6 (lower is better)
Translates to: VRHFSSSSRTLD*MLSKVFSSSRT
Trigger: AGTGCGGCTGCTAGAGAACACCTTGGACAGCATGCAGTCCAAGGTTCGAGAGCTGGAAGAGAAATGCCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644209.1
CDS CCA 72 bp GCCAAATCGCGCTCTCTGGTCACGAGGGTGAGCGGATaGTTGAGATGCACATACTCTGCCTTCACCTTGTCA +
Preference number: 6 (lower is better)
Translates to: AKSRSLVTRVSG*LRCTYSAFTLS
Trigger: TGACAAGGTGAAGGCAGAGTATGTGCATCTCAACCATCCGCTCACCCTCGTGACCAGAGAGCGCGATTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000535703.6
ENST00000541840.2
CDS CCA 72 bp AGGACCTGTTCTAGGTTCTCCAGCTTGGCTTGGAGCTaGTGTTTCTCCTTCACGGCCAAATCGCGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: RTCSRFSSLAWS*CFSFTAKSRSL
Trigger: CAGAGAGCGCGATTTGGCCGTGAAGGAGAAACACCAGCTCCAAGCCAAGCTGGAGAACCTAGAACAGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261655.8
ENST00000535703.6
ENST00000541840.2
ENST00000544568.2
ENST00000643940.1
CDS CCA 72 bp GCCAAATCGCGCTCTCTGGTCACGAGGGTGAGCGGATaGTTGAGATGCACATACTCTGCCTTCACCACAAAG +
Preference number: 6 (lower is better)
Translates to: AKSRSLVTRVSG*LRCTYSAFTTK
Trigger: CTTTGTGGTGAAGGCAGAGTATGTGCATCTCAACCATCCGCTCACCCTCGTGACCAGAGAGCGCGATTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS GCA 72 bp TCTCGAACCTTGGACTTCTGCAGAAGGTCAATTTCCTaGTGCTTGGCACTGAGAACAGCCAGGGCCTGGTCA +
Preference number: 6 (lower is better)
Translates to: SRTLDFCRRSIS*CLALRTARAWS
Trigger: TGACCAGGCCCTGGCTGTTCTCAGTGCCAAGCAGCAGGAAATTGACCTTCTGCAGAAGTCCAAGGTTCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS GCA 72 bp GGGAAAAGCATCGCCAAGCACGCCGGGCAGGGAAGATaGTATTCTCTAGAATACCTGCATGCTGTCCAAGGT +
Preference number: 6 (lower is better)
Translates to: GKSIAKHAGQGR*YSLEYLHAVQG
Trigger: ACCTTGGACAGCATGCAGGTATTCTAGAGAATAGCATCTTCCCTGCCCGGCGTGCTTGGCGATGCTTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647475.1
CDS GCA 72 bp CGCTCTCTGGTCACGAGGGTGAGCGGATGGTTGAGATaGACATACTCTGCCTTCACCACAAAGTTTCTCTGC +
Preference number: 6 (lower is better)
Translates to: RSLVTRVSGWLR*TYSAFTTKFLC
Trigger: GCAGAGAAACTTTGTGGTGAAGGCAGAGTATGTGCATCTCAACCATCCGCTCACCCTCGTGACCAGAGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS TCA 72 bp TCATACAGGGCCACCATTCTCCGCGTCGATACCGAATaGCGCCTGCCACTTCTCCTGCTTCTCTCTATTTTC +
Preference number: 6 (lower is better)
Translates to: SYRATILRVDTE*RLPLLLLLSIF
Trigger: GAAAATAGAGAGAAGCAGGAGAAGTGGCAGGCGTCATTCGGTATCGACGCGGAGAATGGTGGCCCTGTATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000536632.1
ENST00000643940.1
CDS CCA 72 bp TTTGAGTCCGGCATTTCTCTTCCAGCTCTCGAACCTTaGACTGCATGCTGTCCAAGGTGTTCTCTAGCAGCC +
Preference number: 6 (lower is better)
Translates to: FESGISLPALEP*TACCPRCSLAA
Trigger: GGCTGCTAGAGAACACCTTGGACAGCATGCAGTCCAAGGTTCGAGAGCTGGAAGAGAAATGCCGGACTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644209.1
CDS CAA 72 bp AAATCGCGCTCTCTGGTCACGAGGGTGAGCGGATGGTaGAGATGCACATACTCTGCCTTCACCACAAAGTTT +
Preference number: 6 (lower is better)
Translates to: KSRSLVTRVSGW*RCTYSAFTTKF
Trigger: AAACTTTGTGGTGAAGGCAGAGTATGTGCATCTCAACCATCCGCTCACCCTCGTGACCAGAGAGCGCGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643940.1
CDS TCA 72 bp AGGAGCGTGCACGGGAAATGCAGCTTTGGAAAGCAGTaGGGATGGCAGCGGTTCCTTGACTTTTGTCTTTTT +
Preference number: 6 (lower is better)
Translates to: RSVHGKCSFGKQ*GWQRFLDFCLF
Trigger: AAAAAGACAAAAGTCAAGGAACCGCTGCCATCCTCACTGCTTTCCAAAGCTGCATTTCCCGTGCACGCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536632.1
CDS TCA 72 bp GAAACCAAGAGTGCTAACGAACGTCATCGTCAACTGTaGAAGCATGGGACACTTCCTAAAGTGCGGACACTG +
Preference number: 6 (lower is better)
Translates to: ETKSANERHRQL*KHGTLPKVRTL
Trigger: CAGTGTCCGCACTTTAGGAAGTGTCCCATGCTTTCACAGTTGACGATGACGTTCGTTAGCACTCTTGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS CAA 90 bp AAAGCCCTGTCTAAGAAGCTGATCCATCATCTCCTCATCATCTGCTaGTATCTCAGAGACCATGTTACAAGGAATAAGGCCAAGCCGGGC +
Preference number: 6 (lower is better)
Translates to: KALSKKLIHHLLIIC*YLRDHVTRNKAKPG
Trigger: GCCCGGCTTGGCCTTATTCCTTGTAACATGGTCTCTGAGATACAAGCAGATGATGAGGAGATGATGGATCAGCTTCTTAGACAGGGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000536632.1
ENST00000643940.1
CDS TCA 72 bp AGGCCAGCAGATTTGAGCCCTGGATCTAGCCATGTCTaGAGCCACATTTTCAGTGATGGGCACAAAAACAAT +
Preference number: 6 (lower is better)
Translates to: RPADLSPGSSHV*SHIFSDGHKNN
Trigger: ATTGTTTTTGTGCCCATCACTGAAAATGTGGCTTCAGACATGGCTAGATCCAGGGCTCAAATCTGCTGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6
CDS CAA 90 bp CAGAAAGATAGACTTCTACGTCATCAGGCACTTCTTCCAAGAAGTTaGAGGGCACAAGGCCTTTCTGCCCATTCAGCTCCCCATAATAAA +
Preference number: 6 (lower is better)
Translates to: QKDRLLRHQALLPRS*RAQGLSAHSAPHNK
Trigger: TTTATTATGGGGAGCTGAATGGGCAGAAAGGCCTTGTGCCCTCAAACTTCTTGGAAGAAGTGCCTGATGACGTAGAAGTCTATCTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000540658.1
ENST00000643940.1
CDS CAA 72 bp AATGAACACTCTTCTTCCTTTTTGCCTTTGAGCGCATaGGCGTATCTTGAGAGTAGTGGGATGGAGCATCAG +
Preference number: 6 (lower is better)
Translates to: NEHSSSFLPLSA*AYLESSGMEHQ
Trigger: CTGATGCTCCATCCCACTACTCTCAAGATACGCCAATGCGCTCAAAGGCAAAAAGGAAGAAGAGTGTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261655.8
CDS CAA 72 bp TCTAAGAAGCTGATCCATCATCTCCTCATCATCTGCTaGTATCTCAGAGACCATGTTACAAGGAATAAGGCC +
Preference number: 6 (lower is better)
Translates to: SKKLIHHLLIIC*YLRDHVTRNKA
Trigger: GGCCTTATTCCTTGTAACATGGTCTCTGAGATACAAGCAGATGATGAGGAGATGATGGATCAGCTTCTTAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261655.8
ENST00000536632.1
ENST00000643940.1
CDS CAA 72 bp GCACAAAAACAATTTCCTGTTTGGGTTTTCTGTCGCTaGAAACCAAGAGTGCTAACGAACGTCATCGTCAAC +
Preference number: 6 (lower is better)
Translates to: AQKQFPVWVFCR*KPRVLTNVIVN
Trigger: GTTGACGATGACGTTCGTTAGCACTCTTGGTTTCAAGCGACAGAAAACCCAAACAGGAAATTGTTTTTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535703.6