RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RILP (Homo sapiens)

Ensembl gene IDs: ENSG00000167705, ENSG00000274145

Ensembl transcript IDs: ENST00000301336.7, ENST00000570858.5, ENST00000573398.1, ENST00000574810.5, ENST00000622136.2, ENST00000631766.1, ENST00000632939.1, ENST00000633176.1

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTGACCCCGTCCTGCCCTaGTGCAGGCCAGGATTGGGG +
Preference number: 2 (lower is better)
Translates to: YYMSSGRLHKALGARQSADPVLP*CRPGLG
Trigger: CCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTC...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR TCA 90 bp CAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGGACCCCGTCCTGCCCTaGTGCAGGCCAGGATTGGGG +
Preference number: 2 (lower is better)
Translates to: QRGTLISGPRGSVQRRREDPVLP*CRPGLG
Trigger: CCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTC...CTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR TCA 90 bp ACGGGCAGTTCTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCGACCCCGTCCTGCCCTaGTGCAGGCCAGGATTGGGG +
Preference number: 2 (lower is better)
Translates to: TGSSLLHELRPSAQSPGSDPVLP*CRPGLG
Trigger: CCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTC...GCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAGAACTGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR TCA 90 bp CTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGACCCCGTCCTGCCCTaGTGCAGGCCAGGATTGGGG +
Preference number: 2 (lower is better)
Translates to: LYYMSSGRLHKALGARQSDPVLP*CRPGLG
Trigger: CCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTC...TGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR GCA 90 bp CAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGAGCTGAGACCCCGTCCTaGCCTGATGCAGGCCAGGAT +
Preference number: 2 (lower is better)
Translates to: QAVCTKPWELGSQLSFHGAETPS*PDAGQD
Trigger: ATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGC...TCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR GCA 90 bp CAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGGCTGAGACCCCGTCCTaGCCTGATGCAGGCCAGGAT +
Preference number: 2 (lower is better)
Translates to: QRGTLISGPRGSVQRRREAETPS*PDAGQD
Trigger: ATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGC...CTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR GCA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGCTGAGACCCCGTCCTaGCCTGATGCAGGCCAGGAT +
Preference number: 2 (lower is better)
Translates to: RLREALLYLAPEARYRDVAETPS*PDAGQD
Trigger: ATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGC...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR CCA 90 bp ATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTAGGCACTCTTATATCTaGCCCCAGAGGCTCGGTACA +
Preference number: 2 (lower is better)
Translates to: MSSGRLHKALGARQSALIRHSYI*PQRLGT
Trigger: TGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCT...AATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR CCA 90 bp TCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGAGGCACTCTTATATCTaGCCCCAGAGGCTCGGTACA +
Preference number: 2 (lower is better)
Translates to: SGRLHKALGARQSALISWRHSYI*PQRLGT
Trigger: TGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCT...CCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR CCA 90 bp ACGGGCAGTTCTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCAGGCACTCTTATATCTaGCCCCAGAGGCTCGGTACA +
Preference number: 2 (lower is better)
Translates to: TGSSLLHELRPSAQSPGSRHSYI*PQRLGT
Trigger: TGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCT...GCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAGAACTGCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR CCA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTAGGCACTCTTATATCTaGCCCCAGAGGCTCGGTACA +
Preference number: 2 (lower is better)
Translates to: YYMSSGRLHKALGARQSARHSYI*PQRLGT
Trigger: TGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCT...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR TCA 90 bp CTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCACATGGATGGGGAAACTaGGACTCAGAGAGGCACTCT +
Preference number: 2 (lower is better)
Translates to: LYYMSSGRLHKALGARQSHGWGN*DSERHS
Trigger: AGAGTGCCTCTCTGAGTCTCAGTTTCCCCATCCATG...TGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR TCA 72 bp GGCGAGGGCTGTGAAGGCGGGAGCCCTGTCCTCATTTaGGGCCACACATCCTTCCACAGCCAGACCCCTAAG +
Preference number: 3 (lower is better)
Translates to: GEGCEGGSPVLI*GHTSFHSQTPK
Trigger: CTTAGGGGTCTGGCTGTGGAAGGATGTGTGGCCTCAAATGAGGACAGGGCTCCCGCCTTCACAGCCCTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR CAA 90 bp CAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGAGAGCCCTGTCCTCATTaGAGGCCACACATCCTTCCA +
Preference number: 3 (lower is better)
Translates to: QAVCTKPWELGSQLSFHGEPCPH*RPHILP
Trigger: TGGAAGGATGTGTGGCCTCAAATGAGGACAGGGCTC...TCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR CAA 90 bp CAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGGAGCCCTGTCCTCATTaGAGGCCACACATCCTTCCA +
Preference number: 3 (lower is better)
Translates to: QRGTLISGPRGSVQRRREEPCPH*RPHILP
Trigger: TGGAAGGATGTGTGGCCTCAAATGAGGACAGGGCTC...CTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR CAA 90 bp CTGAGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGAGCCCTGTCCTCATTaGAGGCCACACATCCTTCCA +
Preference number: 3 (lower is better)
Translates to: LRLREALLYLAPEARYRDEPCPH*RPHILP
Trigger: TGGAAGGATGTGTGGCCTCAAATGAGGACAGGGCTC...GTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR-3UTR CAA 90 bp CTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGAGCCCTGTCCTCATTaGAGGCCACACATCCTTCCA +
Preference number: 3 (lower is better)
Translates to: LYYMSSGRLHKALGARQSEPCPH*RPHILP
Trigger: TGGAAGGATGTGTGGCCTCAAATGAGGACAGGGCTC...TGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR TCA 72 bp CTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACTaGGACTCAGAGAGGCACTCTTATATCTGGCCCCAG +
Preference number: 3 (lower is better)
Translates to: LGSQLSFHGWGN*DSERHSYIWPQ
Trigger: CTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAGTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
3UTR TCA 72 bp ACAGTTTCTGTGTATTACGGGCAGTTCTTTATTACATaGGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTA +
Preference number: 3 (lower is better)
Translates to: TVSVYYGQFFIT*AQAVCTKPWEL
Trigger: TAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAGAACTGCCCGTAATACACAGAAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574810.5
ENST00000633176.1
CDS-3UTR CCA 90 bp GATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCTGCGCGGCGCGCAGCTaGGTCTGCATGGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: DAGQDWGRPLARAVKAGACAARS*VCMAAS
Trigger: GCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCA...GGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp GATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCGTCCTCAGGGTTCCCTaGGGCGCCTGCGCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: DAGQDWGRPLARAVKAGAVLRVP*GACAGG
Trigger: ACCGCCGGCGCAGGCGCCCCAGGGAACCCTGAGGAC...GGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp AGAGGGAGGCGGGCTGAGACCCCGTCCTGCCCTGATGCAGGCCAGGATTGGGGCGGCCTCTGGGGCGGCTaGGGCCCCCAGACAAAGGTG +
Preference number: 4 (lower is better)
Translates to: RGRRAETPSCPDAGQDWGGLWGG*GPQTKV
Trigger: CACCTTTGTCTGGGGGCCTCAGCCGCCCCAGAGGCC...GCCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGCCCGCCTCCCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGATCCCTCTCGCGGTCCTaGGCGGCGCGCAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGSLSRS*AARSWV
Trigger: GACCCAGCTGCGCGCCGCGCAGGACCGCGAGAGGGA...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCGGCTTCGCCAGGCTaGTGGCGCTCCCTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGAASPG*WRSLSR
Trigger: CCGCGAGAGGGAGCGCCAGCAGCCTGGCGAAGCCGC...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGTTCCCTGGGGCGCCTaGGCCGGCGGTCGCCCATTC +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGVPWGA*AGGRPF
Trigger: GAATGGGCGACCGCCGGCGCAGGCGCCCCAGGGAAC...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp TGCCCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGAAGCGGCACTGCCCTaGCTCCGAGGGGCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: CPDAGQDWGRPLARAVKAEAALP*LRGAPE
Trigger: CTCGGGCGCCCCTCGGAGGCAGGGCAGTGCCGCTTC...CGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGAAGCGGCACTGCCCTaGCTCCGAGGGGCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGEAALP*LRGAPE
Trigger: CTCGGGCGCCCCTCGGAGGCAGGGCAGTGCCGCTTC...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp AGAGGGAGGCGGGCTGAGACCCCGTCCTGCCCTGATGCAGGCCAGGATTGGGGCCGACTGAAGCGGCACTaGCCTGCCTCCGAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RGRRAETPSCPDAGQDWGRLKRH*PASEGR
Trigger: GCGCCCCTCGGAGGCAGGGCAGTGCCGCTTCAGTCG...GCCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGCCCGCCTCCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp AGAGGGAGGCGGGCTGAGACCCCGTCCTGCCCTGATGCAGGCCAGGATTGGGGCGCTTCGCCAGGCTGCTaGCGCTCCCTCTCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: RGRRAETPSCPDAGQDWGASPGC*RSLSRS
Trigger: GGACCGCGAGAGGGAGCGCCAGCAGCCTGGCGAAGC...GCCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGCCCGCCTCCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGTCCTCAGGGTTCCCTaGGGCGCCTGCGCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGVLRVP*GACAGG
Trigger: ACCGCCGGCGCAGGCGCCCCAGGGAACCCTGAGGAC...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp GATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCAGGCCGGGGACCCGGTaGTCTGTGAGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: DAGQDWGRPLARAVKAGARPGTR*SVSSSR
Trigger: GCGGGAGCTGCTCACAGACCACCGGGTCCCCGGCCT...GGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGGCCTCTGGGGCGGCTaGGGCCCCCAGACAAAGGTG +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGGLWGG*GPQTKV
Trigger: CACCTTTGTCTGGGGGCCTCAGCCGCCCCAGAGGCC...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp TGCCCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGCCTCTGGGGCGGCTaGGGCCCCCAGACAAAGGTG +
Preference number: 4 (lower is better)
Translates to: CPDAGQDWGRPLARAVKAGLWGG*GPQTKV
Trigger: CACCTTTGTCTGGGGGCCTCAGCCGCCCCAGAGGCC...CGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp AGAGGGAGGCGGGCTGAGACCCCGTCCTGCCCTGATGCAGGCCAGGATTGGGGCGACCCCGTCCTGCCCTaGTGCAGGCCAGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: RGRRAETPSCPDAGQDWGDPVLP*CRPGLG
Trigger: CCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTC...GCCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGCCCGCCTCCCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGACGGCGCGCCAGATCCTaGAGCTCAGTGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGRRARS*SSVPRA
Trigger: GGCCCTGGGCACTGAGCTGCAGGATCTGGCGCGCCG...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp TGCCCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGCGCAGGTCGCGGTTGTaGGCCCGGAGTTCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: CPDAGQDWGRPLARAVKARRSRL*ARSSSR
Trigger: GCGGGACGAACTCCGGGCGCACAACCGCGACCTGCG...CGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGACGACTGAAGCGGCACTaGCCTGCCTCCGAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGRLKRH*PASEGR
Trigger: GCGCCCCTCGGAGGCAGGGCAGTGCCGCTTCAGTCG...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp AGAGGGAGGCGGGCTGAGACCCCGTCCTGCCCTGATGCAGGCCAGGATTGGGGCAGGAGGCGCTGCAGCTaGTCCTGCAACGCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: RGRRAETPSCPDAGQDWGRRRCS*SCNASV
Trigger: GACCGAGGCGTTGCAGGAGCAGCTGCAGCGCCTCCT...GCCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGCCCGCCTCCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp GATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCACCAGCAGGAGGCGCTaGAGCTGCTCCTGCAACGCC +
Preference number: 4 (lower is better)
Translates to: DAGQDWGRPLARAVKAGATSRRR*SCSCNA
Trigger: GGCGTTGCAGGAGCAGCTGCAGCGCCTCCTGCTGGT...GGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR TCA 90 bp GATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCCAAACTCCTCCCGACTaGAGCGGCACTGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: DAGQDWGRPLARAVKAGAQTPPD*SGTALP
Trigger: AGGCAGGGCAGTGCCGCTTCAGTCGGGAGGAGTTTG...GGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp GATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCATGGCCGCCAGCTTGTaGCGCAGCTCAGCGTTCACC +
Preference number: 4 (lower is better)
Translates to: DAGQDWGRPLARAVKAGAMAASL*RSSAFT
Trigger: GGTGAACGCTGAGCTGCGGCACAAGCTGGCGGCCAT...GGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp AGAGGGAGGCGGGCTGAGACCCCGTCCTGCCCTGATGCAGGCCAGGATTGGGGCGGACAGCCACCTTCATaGCCTCGAGCAGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RGRRAETPSCPDAGQDWGGQPPS*PRAEGR
Trigger: CCGGCCTTCTGCTCGAGGCCATGAAGGTGGCTGTCC...GCCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGCCCGCCTCCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp GATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCCTCCCCCTAGCTTGCTaGGTGCAGGGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: DAGQDWGRPLARAVKAGALPLAC*VQGCWS
Trigger: AGACCAGCAGCCCTGCACCCAGCAAGCTAGGGGGAG...GGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp TGCCCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGCAAACTCCTCCCGACTaGAGCGGCACTGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: CPDAGQDWGRPLARAVKAQTPPD*SGTALP
Trigger: AGGCAGGGCAGTGCCGCTTCAGTCGGGAGGAGTTTG...CGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp AGAGGGAGGCGGGCTGAGACCCCGTCCTGCCCTGATGCAGGCCAGGATTGGGGCTGCTGGGTGCAGGGCTaGTGGTCTCATCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RGRRAETPSCPDAGQDWGCWVQG*WSHPQR
Trigger: CCTCTGAGGATGAGACCAGCAGCCCTGCACCCAGCA...GCCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGCCCGCCTCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGACTTCTCCCCCTAGCTTaGTGGGTGCAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGLLPLA*WVQGCW
Trigger: CCAGCAGCCCTGCACCCAGCAAGCTAGGGGGAGAAG...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGGACAGCCACCTTCATaGCCTCGAGCAGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGGQPPS*PRAEGR
Trigger: CCGGCCTTCTGCTCGAGGCCATGAAGGTGGCTGTCC...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGACTCCCCCTAGCTTGCTaGGTGCAGGGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGLPLAC*VQGCWS
Trigger: AGACCAGCAGCCCTGCACCCAGCAAGCTAGGGGGAG...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp ACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGGGAGGCGGGTCCCTCTCGCGGTCCTaGGCGGCGCGCAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TLISGPRGSVQRRREGGGSLSRS*AARSWV
Trigger: GACCCAGCTGCGCGCCGCGCAGGACCGCGAGAGGGA...CCCGCCTCCCTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp ACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGGGAGGCGGGGCGGCTTCGCCAGGCTaGTGGCGCTCCCTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: TLISGPRGSVQRRREGGGAASPG*WRSLSR
Trigger: CCGCGAGAGGGAGCGCCAGCAGCCTGGCGAAGCCGC...CCCGCCTCCCTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp ACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGGGAGGCGGGGTCCTCAGGGTTCCCTaGGGCGCCTGCGCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: TLISGPRGSVQRRREGGGVLRVP*GACAGG
Trigger: ACCGCCGGCGCAGGCGCCCCAGGGAACCCTGAGGAC...CCCGCCTCCCTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp GATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCAGGAGCTGGAGACTGTaGTTGGGCCTCCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DAGQDWGRPLARAVKAGARSWRL*LGLLFS
Trigger: GGAGAAGAGGAGGCCCAACCACAGTCTCCAGCTCCT...GGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGAGTTCCCTGGGGCGCCTaGGCCGGCGGTCGCCCATTC +
Preference number: 4 (lower is better)
Translates to: QAVCTKPWELGSQLSFHGVPWGA*AGGRPF
Trigger: GAATGGGCGACCGCCGGCGCAGGCGCCCCAGGGAAC...TCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp ATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTGAAGCGGCACTGCCCTaGCTCCGAGGGGCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: MSSGRLHKALGARQSALIEAALP*LRGAPE
Trigger: CTCGGGCGCCCCTCGGAGGCAGGGCAGTGCCGCTTC...AATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp GATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCCAGCCTCATCCTCACTaGTCTCTGCTTCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: DAGQDWGRPLARAVKAGAQPHPH*SLLPLV
Trigger: CACCAGAGGAAGCAGAGAGCAGTGAGGATGAGGCTG...GGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CCA 90 bp CAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGCGCGGCGCGCAGCTaGGTCTGCATGGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: QAVCTKPWELGSQLSFHGCAARS*VCMAAS
Trigger: GCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCA...TCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp ACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGGGAGGCGGGGCGCGCAGCTGGGTCTaGATGGCCGCCAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: TLISGPRGSVQRRREGGGARSWV*MAASLC
Trigger: GCACAAGCTGGCGGCCATGCAGACCCAGCTGCGCGC...CCCGCCTCCCTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGTCCCTCTCGCGGTCCTaGGCGGCGCGCAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: QRGTLISGPRGSVQRRRESLSRS*AARSWV
Trigger: GACCCAGCTGCGCGCCGCGCAGGACCGCGAGAGGGA...CTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp ACGGGCAGTTCTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTCCCTCTCGCGGTCCTaGGCGGCGCGCAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TGSSLLHELRPSAQSPGSSLSRS*AARSWV
Trigger: GACCCAGCTGCGCGCCGCGCAGGACCGCGAGAGGGA...GCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAGAACTGCCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTGCGGCTTCGCCAGGCTaGTGGCGCTCCCTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: YYMSSGRLHKALGARQSAAASPG*WRSLSR
Trigger: CCGCGAGAGGGAGCGCCAGCAGCCTGGCGAAGCCGC...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTGAAGCGGCACTGCCCTaGCTCCGAGGGGCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: YYMSSGRLHKALGARQSAEAALP*LRGAPE
Trigger: CTCGGGCGCCCCTCGGAGGCAGGGCAGTGCCGCTTC...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp ACGGGCAGTTCTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCGTCCTCAGGGTTCCCTaGGGCGCCTGCGCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: TGSSLLHELRPSAQSPGSVLRVP*GACAGG
Trigger: ACCGCCGGCGCAGGCGCCCCAGGGAACCCTGAGGAC...GCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAGAACTGCCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp CAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGAAGGCCGGGGACCCGGTaGTCTGTGAGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: QAVCTKPWELGSQLSFHGRPGTR*SVSSSR
Trigger: GCGGGAGCTGCTCACAGACCACCGGGTCCCCGGCCT...TCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp ATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTAGGCCGGGGACCCGGTaGTCTGTGAGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: MSSGRLHKALGARQSALIRPGTR*SVSSSR
Trigger: GCGGGAGCTGCTCACAGACCACCGGGTCCCCGGCCT...AATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp AGAGGGAGGCGGGCTGAGACCCCGTCCTGCCCTGATGCAGGCCAGGATTGGGGCAGTTCATTCCGCTCCTaGAGGATCTGCTCAAACTCC +
Preference number: 4 (lower is better)
Translates to: RGRRAETPSCPDAGQDWGSSFRS*RICSNS
Trigger: GGAGTTTGAGCAGATCCTTCAGGAGCGGAATGAACT...GCCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGCCCGCCTCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAAGGCCAGTTCCTCCTTaGGCAGGAACACTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGRPVPP*AGTLWL
Trigger: AAGCCAAAGTGTTCCTGCTCAAGGAGGAACTGGCCT...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp TGCCCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGAGGCCAGTTCCTCCTTaGGCAGGAACACTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: CPDAGQDWGRPLARAVKARPVPP*AGTLWL
Trigger: AAGCCAAAGTGTTCCTGCTCAAGGAGGAACTGGCCT...CGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp GATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCCTAACATCTTGGCCTTaGTCTTCTTCCGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: DAGQDWGRPLARAVKAGALTSWP*SSSAAS
Trigger: GGAAGCAGCGGAAGAAGATCAAGGCCAAGATGTTAG...GGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTGGCCTCTGGGGCGGCTaGGGCCCCCAGACAAAGGTG +
Preference number: 4 (lower is better)
Translates to: YYMSSGRLHKALGARQSAGLWGG*GPQTKV
Trigger: CACCTTTGTCTGGGGGCCTCAGCCGCCCCAGAGGCC...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp CAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGAGACCCCGTCCTGCCCTaGTGCAGGCCAGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: QAVCTKPWELGSQLSFHGDPVLP*CRPGLG
Trigger: CCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTC...TCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CTGAGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACCGGCGCGCCAGATCCTaGAGCTCAGTGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LRLREALLYLAPEARYRDRRARS*SSVPRA
Trigger: GGCCCTGGGCACTGAGCTGCAGGATCTGGCGCGCCG...GTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp CTGAGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACCCGCGCGCAGCTCCCTaGGGAGGCGCTCGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRLREALLYLAPEARYRDPRAAP*GGARSP
Trigger: AGGAGAACGAGCGCCTCCGCAGGGAGCTGCGCGCGG...GTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp CAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGAGTGACCTCCTTGAGCTaGCGCAGCAGCGCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: QAVCTKPWELGSQLSFHGVTSLS*RSSARS
Trigger: GGAGCGCGCGCTGCTGCGGCAGCTCAAGGAGGTCAC...TCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCGCAGGTCGCGGTTGTaGGCCCGGAGTTCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: YYMSSGRLHKALGARQSARRSRL*ARSSSR
Trigger: GCGGGACGAACTCCGGGCGCACAACCGCGACCTGCG...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp ACGGGCAGTTCTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCGTCTCCTGGCCGCGCTaGCGCAGGTCGCGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: TGSSLLHELRPSAQSPGSVSWPR*RRSRLC
Trigger: GCACAACCGCGACCTGCGGCAGCGCGGCCAGGAGAC...GCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAGAACTGCCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp CACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACTGGTTCCCTGGGGCGCCTaGGCCGGCGGTCGCCCATTC +
Preference number: 4 (lower is better)
Translates to: HKALGARQSALISWMGKLVPWGA*AGGRPF
Trigger: GAATGGGCGACCGCCGGCGCAGGCGCCCCAGGGAAC...CAGTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGTTCCCTGGGGCGCCTaGGCCGGCGGTCGCCCATTC +
Preference number: 4 (lower is better)
Translates to: LYYMSSGRLHKALGARQSVPWGA*AGGRPF
Trigger: GAATGGGCGACCGCCGGCGCAGGCGCCCCAGGGAAC...TGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGCGACTGAAGCGGCACTaGCCTGCCTCCGAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: QRGTLISGPRGSVQRRRERLKRH*PASEGR
Trigger: GCGCCCCTCGGAGGCAGGGCAGTGCCGCTTCAGTCG...CTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGATTGATCTTCTTCCGCTaGTTCCGGACAGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGLIFFR*FRTATF
Trigger: GAAGGTGGCTGTCCGGAAGCAGCGGAAGAAGATCAA...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp CAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGCGGGCGCCGCCCTCCTaGGCTCCATGTCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QRGTLISGPRGSVQRRRERAPPS*APCLPE
Trigger: CTCTGGGAGACATGGAGCCCAGGAGGGCGGCGCCCG...CTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CCA 90 bp CAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGAACGCCTCGGTCTCCTaGCCGCGCTGCCGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: QRGTLISGPRGSVQRRRENASVS*PRCRRS
Trigger: CGACCTGCGGCAGCGCGGCCAGGAGACCGAGGCGTT...CTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CCA 90 bp CACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACTGTGCGCGGCGCGCAGCTaGGTCTGCATGGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: HKALGARQSALISWMGKLCAARS*VCMAAS
Trigger: GCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCA...CAGTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp TGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACTGCGCGGCGCGCAGCTaGGTCTGCATGGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: CTKPWELGSQLSFHGWGNCAARS*VCMAAS
Trigger: GCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCA...GTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp CTGAGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGCTTCGCCAGGCTGCTaGCGCTCCCTCTCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: LRLREALLYLAPEARYRDASPGC*RSLSRS
Trigger: GGACCGCGAGAGGGAGCGCCAGCAGCCTGGCGAAGC...GTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp GATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCGGAACACTTTGGCTTTaGGTTCATTCCGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: DAGQDWGRPLARAVKAGAGTLWL*VHSAPE
Trigger: TTCAGGAGCGGAATGAACTCAAAGCCAAAGTGTTCC...GGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp CAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGAGGACCCGGTGGTCTGTaGGCAGCTCCCGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QAVCTKPWELGSQLSFHGGPGGL*AAPAGS
Trigger: ACTTCCAGCGGGAGCTGCTCACAGACCACCGGGTCC...TCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCATCCTGCTCCGCCGGCTaGGCCGACACCTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LYYMSSGRLHKALGARQSSCSAG*ADTCSE
Trigger: CTCGCTGCAGGTGTCGGCGCAGCCGGCGGAGCAGGA...TGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTACCGCGCGCAGCTCCCTaGGGAGGCGCTCGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RLREALLYLAPEARYRDVPRAAP*GGARSP
Trigger: AGGAGAACGAGCGCCTCCGCAGGGAGCTGCGCGCGG...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGTCTCCTGGCCGCGCTaGCGCAGGTCGCGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: RLREALLYLAPEARYRDVVSWPR*RRSRLC
Trigger: GCACAACCGCGACCTGCGGCAGCGCGGCCAGGAGAC...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp TCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGAGGAGGCGCTGCAGCTaGTCCTGCAACGCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: SGRLHKALGARQSALISWRRRCS*SCNASV
Trigger: GACCGAGGCGTTGCAGGAGCAGCTGCAGCGCCTCCT...CCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp ACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGGGAGGCGGGATGGCCGCCAGCTTGTaGCGCAGCTCAGCGTTCACC +
Preference number: 4 (lower is better)
Translates to: TLISGPRGSVQRRREGGGMAASL*RSSAFT
Trigger: GGTGAACGCTGAGCTGCGGCACAAGCTGGCGGCCAT...CCCGCCTCCCTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTGCGCGCAGCTGGGTCTaGATGGCCGCCAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: YYMSSGRLHKALGARQSAARSWV*MAASLC
Trigger: GCACAAGCTGGCGGCCATGCAGACCCAGCTGCGCGC...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp ACGGGCAGTTCTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCGCGCGCAGCTGGGTCTaGATGGCCGCCAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: TGSSLLHELRPSAQSPGSARSWV*MAASLC
Trigger: GCACAAGCTGGCGGCCATGCAGACCCAGCTGCGCGC...GCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAGAACTGCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTACGGGCGCCGCCCTCCTaGGCTCCATGTCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RLREALLYLAPEARYRDVRAPPS*APCLPE
Trigger: CTCTGGGAGACATGGAGCCCAGGAGGGCGGCGCCCG...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CCA 90 bp CACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACTGGCTTCGCCAGGCTGCTaGCGCTCCCTCTCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: HKALGARQSALISWMGKLASPGC*RSLSRS
Trigger: GGACCGCGAGAGGGAGCGCCAGCAGCCTGGCGAAGC...CAGTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp CTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAAGGCCGGGGACCCGGTaGTCTGTGAGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LYYMSSGRLHKALGARQSRPGTR*SVSSSR
Trigger: GCGGGAGCTGCTCACAGACCACCGGGTCCCCGGCCT...TGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp ACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGGGAGGCGGGTCCGGGGGTGGGGGATaGTCTCCCTTGTCATCGGAG +
Preference number: 4 (lower is better)
Translates to: TLISGPRGSVQRRREGGGSGGGG*SPLSSE
Trigger: CTCCGATGACAAGGGAGACCATCCCCCACCCCCGGA...CCCGCCTCCCTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR TCA 90 bp CCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGGAACACTTTGGCTTTaGGTTCATTCCGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PDAGQDWGRPLARAVKAGGTLWL*VHSAPE
Trigger: TTCAGGAGCGGAATGAACTCAAAGCCAAAGTGTTCC...TCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp TCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGGATCCTGCAGCTCAGTaGCCAGGGCCCCGGCTAGAT +
Preference number: 4 (lower is better)
Translates to: SGRLHKALGARQSALISWDPAAQ*PGPRLD
Trigger: ATCTAGCCGGGGCCCTGGGCACTGAGCTGCAGGATC...CCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp TGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACGTGACCTCCTTGAGCTaGCGCAGCAGCGCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: CTKPWELGSQLSFHGWGNVTSLS*RSSARS
Trigger: GGAGCGCGCGCTGCTGCGGCAGCTCAAGGAGGTCAC...GTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp CAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGAATGGCCGCCAGCTTGTaGCGCAGCTCAGCGTTCACC +
Preference number: 4 (lower is better)
Translates to: QAVCTKPWELGSQLSFHGMAASL*RSSAFT
Trigger: GGTGAACGCTGAGCTGCGGCACAAGCTGGCGGCCAT...TCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGACTTCTCCCCCTAGCTTaGTGGGTGCAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QAVCTKPWELGSQLSFHGLLPLA*WVQGCW
Trigger: CCAGCAGCCCTGCACCCAGCAAGCTAGGGGGAGAAG...TCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp CTGAGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACAGGGCCCCGGCTAGATaGTACACAAGCTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: LRLREALLYLAPEARYRDRAPAR*YTSSAA
Trigger: GGCCGCGGAGCTTGTGTACCATCTAGCCGGGGCCCT...GTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CCA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTAGGGCCCCGGCTAGATaGTACACAAGCTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: YYMSSGRLHKALGARQSARAPAR*YTSSAA
Trigger: GGCCGCGGAGCTTGTGTACCATCTAGCCGGGGCCCT...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CCA 90 bp CTGAGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGCAGCTGGGTCTGCATaGCCGCCAGCTTGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: LRLREALLYLAPEARYRDAAGSA*PPACAA
Trigger: TGCGGCACAAGCTGGCGGCCATGCAGACCCAGCTGC...GTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp ATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTGGACAGCCACCTTCATaGCCTCGAGCAGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: MSSGRLHKALGARQSALIGQPPS*PRAEGR
Trigger: CCGGCCTTCTGCTCGAGGCCATGAAGGTGGCTGTCC...AATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp TCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGGGACAGCCACCTTCATaGCCTCGAGCAGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SGRLHKALGARQSALISWGQPPS*PRAEGR
Trigger: CCGGCCTTCTGCTCGAGGCCATGAAGGTGGCTGTCC...CCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp ATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTCTCCCCCTAGCTTGCTaGGTGCAGGGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: MSSGRLHKALGARQSALILPLAC*VQGCWS
Trigger: AGACCAGCAGCCCTGCACCCAGCAAGCTAGGGGGAG...AATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp TCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGCTCCCCCTAGCTTGCTaGGTGCAGGGCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SGRLHKALGARQSALISWLPLAC*VQGCWS
Trigger: AGACCAGCAGCCCTGCACCCAGCAAGCTAGGGGGAG...CCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCAAACTCCTCCCGACTaGAGCGGCACTGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: YYMSSGRLHKALGARQSAQTPPD*SGTALP
Trigger: AGGCAGGGCAGTGCCGCTTCAGTCGGGAGGAGTTTG...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGGACCCGGTGGTCTGTaGGCAGCTCCCGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RLREALLYLAPEARYRDVGPGGL*AAPAGS
Trigger: ACTTCCAGCGGGAGCTGCTCACAGACCACCGGGTCC...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp TGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACGGACCCGGTGGTCTGTaGGCAGCTCCCGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: CTKPWELGSQLSFHGWGNGPGGL*AAPAGS
Trigger: ACTTCCAGCGGGAGCTGCTCACAGACCACCGGGTCC...GTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAACCAGCAGGAGGCGCTaGAGCTGCTCCTGCAACGCC +
Preference number: 4 (lower is better)
Translates to: RLREALLYLAPEARYRDVTSRRR*SCSCNA
Trigger: GGCGTTGCAGGAGCAGCTGCAGCGCCTCCTGCTGGT...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp CAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGATGGCCGCCAGCTTGTaGCGCAGCTCAGCGTTCACC +
Preference number: 4 (lower is better)
Translates to: QRGTLISGPRGSVQRRREMAASL*RSSAFT
Trigger: GGTGAACGCTGAGCTGCGGCACAAGCTGGCGGCCAT...CTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CTGAGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGCTCGCTCTTTAGCCTaGGGAGTCGCGGCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: LRLREALLYLAPEARYRDARSLA*GVAASP
Trigger: TGGCGAAGCCGCGACTCCGCAGGCTAAAGAGCGAGC...GTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTGCTCGCTCTTTAGCCTaGGGAGTCGCGGCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: YYMSSGRLHKALGARQSAARSLA*GVAASP
Trigger: TGGCGAAGCCGCGACTCCGCAGGCTAAAGAGCGAGC...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp ATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTGCTGGGTGCAGGGCTaGTGGTCTCATCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: MSSGRLHKALGARQSALICWVQG*WSHPQR
Trigger: CCTCTGAGGATGAGACCAGCAGCCCTGCACCCAGCA...AATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp ACGGGCAGTTCTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCCTTCTCCCCCTAGCTTaGTGGGTGCAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TGSSLLHELRPSAQSPGSLLPLA*WVQGCW
Trigger: CCAGCAGCCCTGCACCCAGCAAGCTAGGGGGAGAAG...GCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAGAACTGCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTTCTCCCCCTAGCTTaGTGGGTGCAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YYMSSGRLHKALGARQSALLPLA*WVQGCW
Trigger: CCAGCAGCCCTGCACCCAGCAAGCTAGGGGGAGAAG...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGCAGCTGGGTCTGCATaGCCGCCAGCTTGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: RLREALLYLAPEARYRDVAAGSA*PPACAA
Trigger: TGCGGCACAAGCTGGCGGCCATGCAGACCCAGCTGC...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGATCCTGCAGCTCAGTaGCCAGGGCCCCGGCTAGAT +
Preference number: 4 (lower is better)
Translates to: RLREALLYLAPEARYRDVDPAAQ*PGPRLD
Trigger: ATCTAGCCGGGGCCCTGGGCACTGAGCTGCAGGATC...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR GCA 90 bp CTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCGCTCTTTAGCCTaGGGAGTCGCGGCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: LYYMSSGRLHKALGARQSARSLA*GVAASP
Trigger: TGGCGAAGCCGCGACTCCGCAGGCTAAAGAGCGAGC...TGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGCTCGCTCTTTAGCCTaGGGAGTCGCGGCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: RLREALLYLAPEARYRDVARSLA*GVAASP
Trigger: TGGCGAAGCCGCGACTCCGCAGGCTAAAGAGCGAGC...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CTGAGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACTGCTGGGTGCAGGGCTaGTGGTCTCATCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LRLREALLYLAPEARYRDCWVQG*WSHPQR
Trigger: CCTCTGAGGATGAGACCAGCAGCCCTGCACCCAGCA...GTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACTGGCTGAGACCCCGTCCTaGCCTGATGCAGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: HKALGARQSALISWMGKLAETPS*PDAGQD
Trigger: ATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGC...CAGTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTGAGACCCCGTCCTaGCCTGATGCAGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LYYMSSGRLHKALGARQSAETPS*PDAGQD
Trigger: ATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGC...TGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp CTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCATCCGGGGGTGGGGGATaGTCTCCCTTGTCATCGGAG +
Preference number: 4 (lower is better)
Translates to: LYYMSSGRLHKALGARQSSGGGG*SPLSSE
Trigger: CTCCGATGACAAGGGAGACCATCCCCCACCCCCGGA...TGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CCA 90 bp CAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGAAGGAGCTGGAGACTGTaGTTGGGCCTCCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QAVCTKPWELGSQLSFHGRSWRL*LGLLFS
Trigger: GGAGAAGAGGAGGCCCAACCACAGTCTCCAGCTCCT...TCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTATTTGGACTCCGGGGGTaGGGGATGGTCTCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: RLREALLYLAPEARYRDVFGLRG*GMVSLV
Trigger: GACAAGGGAGACCATCCCCCACCCCCGGAGTCCAAA...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CCA 90 bp TGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACTTTGGACTCCGGGGGTaGGGGATGGTCTCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: CTKPWELGSQLSFHGWGNFGLRG*GMVSLV
Trigger: GACAAGGGAGACCATCCCCCACCCCCGGAGTCCAAA...GTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CCA 90 bp ATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTGGGTGCAGGGCTGCTaGTCTCATCCTCAGAGGATT +
Preference number: 4 (lower is better)
Translates to: MSSGRLHKALGARQSALIWVQGC*SHPQRI
Trigger: AATCCTCTGAGGATGAGACCAGCAGCCCTGCACCCA...AATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp CTGAGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACAGGAGCTGGAGACTGTaGTTGGGCCTCCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LRLREALLYLAPEARYRDRSWRL*LGLLFS
Trigger: GGAGAAGAGGAGGCCCAACCACAGTCTCCAGCTCCT...GTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp ATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTAGACAAAGGTGTTCGTaGAGGGCAGAACAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: MSSGRLHKALGARQSALIRQRCS*RAEQGG
Trigger: TCCGCCCTGTTCTGCCCTCCACGAACACCTTTGTCT...AATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp TCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGAGACAAAGGTGTTCGTaGAGGGCAGAACAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: SGRLHKALGARQSALISWRQRCS*RAEQGG
Trigger: TCCGCCCTGTTCTGCCCTCCACGAACACCTTTGTCT...CCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp ACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGGGAGGCGGGAGGCACTCTTATATCTaGCCCCAGAGGCTCGGTACA +
Preference number: 4 (lower is better)
Translates to: TLISGPRGSVQRRREGGGRHSYI*PQRLGT
Trigger: TGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCT...CCCGCCTCCCTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp TGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACGGAAGGGAGAAGGCGTaGGGTAGGGAGATAGTGCCC +
Preference number: 4 (lower is better)
Translates to: CTKPWELGSQLSFHGWGNGREKA*GREIVP
Trigger: GGGCACTATCTCCCTACCCCACGCCTTCTCCCTTCC...GTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622136.2
CDS-3UTR TCA 90 bp ACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGGGAGGCGGGCTAACATCTTGGCCTTaGTCTTCTTCCGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TLISGPRGSVQRRREGGGLTSWP*SSSAAS
Trigger: GGAAGCAGCGGAAGAAGATCAAGGCCAAGATGTTAG...CCCGCCTCCCTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CTGAGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACCAGCCTCATCCTCACTaGTCTCTGCTTCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LRLREALLYLAPEARYRDQPHPH*SLLPLV
Trigger: CACCAGAGGAAGCAGAGAGCAGTGAGGATGAGGCTG...GTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CCA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTTGGGTGCAGGGCTGCTaGTCTCATCCTCAGAGGATT +
Preference number: 4 (lower is better)
Translates to: YYMSSGRLHKALGARQSAWVQGC*SHPQRI
Trigger: AATCCTCTGAGGATGAGACCAGCAGCCCTGCACCCA...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp CAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGTGGGTGCAGGGCTGCTaGTCTCATCCTCAGAGGATT +
Preference number: 4 (lower is better)
Translates to: QRGTLISGPRGSVQRRREWVQGC*SHPQRI
Trigger: AATCCTCTGAGGATGAGACCAGCAGCCCTGCACCCA...CTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp TGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACAGGAGCTGGAGACTGTaGTTGGGCCTCCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CTKPWELGSQLSFHGWGNRSWRL*LGLLFS
Trigger: GGAGAAGAGGAGGCCCAACCACAGTCTCCAGCTCCT...GTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp CTGAGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACAGACAAAGGTGTTCGTaGAGGGCAGAACAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: LRLREALLYLAPEARYRDRQRCS*RAEQGG
Trigger: TCCGCCCTGTTCTGCCCTCCACGAACACCTTTGTCT...GTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp ACGGGCAGTTCTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCAGGCCAGTTCCTCCTTaGGCAGGAACACTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TGSSLLHELRPSAQSPGSRPVPP*AGTLWL
Trigger: AAGCCAAAGTGTTCCTGCTCAAGGAGGAACTGGCCT...GCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAGAACTGCCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp ATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTCTAACATCTTGGCCTTaGTCTTCTTCCGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: MSSGRLHKALGARQSALILTSWP*SSSAAS
Trigger: GGAAGCAGCGGAAGAAGATCAAGGCCAAGATGTTAG...AATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp CAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGCATGGATGGGGAAACTaGGACTCAGAGAGGCACTCT +
Preference number: 4 (lower is better)
Translates to: QRGTLISGPRGSVQRRREHGWGN*DSERHS
Trigger: AGAGTGCCTCTCTGAGTCTCAGTTTCCCCATCCATG...CTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp ACGGGCAGTTCTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCCATGGATGGGGAAACTaGGACTCAGAGAGGCACTCT +
Preference number: 4 (lower is better)
Translates to: TGSSLLHELRPSAQSPGSHGWGN*DSERHS
Trigger: AGAGTGCCTCTCTGAGTCTCAGTTTCCCCATCCATG...GCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAGAACTGCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp ACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGGGAGGCGGGCAGTTCTTTATTACATaGGCTCAGGCCGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: TLISGPRGSVQRRREGGGQFFIT*AQAVCT
Trigger: TGTGCAGACGGCCTGAGCTCATGTAATAAAGAACTG...CCCGCCTCCCTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGTTGATCTTCTTCCGCTaGTTCCGGACAGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: QRGTLISGPRGSVQRRRELIFFR*FRTATF
Trigger: GAAGGTGGCTGTCCGGAAGCAGCGGAAGAAGATCAA...CTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTATGGGTGCAGGGCTGCTaGTCTCATCCTCAGAGGATT +
Preference number: 4 (lower is better)
Translates to: RLREALLYLAPEARYRDVWVQGC*SHPQRI
Trigger: AATCCTCTGAGGATGAGACCAGCAGCCCTGCACCCA...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAAGACAAAGGTGTTCGTaGAGGGCAGAACAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: RLREALLYLAPEARYRDVRQRCS*RAEQGG
Trigger: TCCGCCCTGTTCTGCCCTCCACGAACACCTTTGTCT...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CCA 90 bp CAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGAGGCACTCTTATATCTaGCCCCAGAGGCTCGGTACA +
Preference number: 4 (lower is better)
Translates to: QRGTLISGPRGSVQRRRERHSYI*PQRLGT
Trigger: TGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCT...CTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp CTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAAGGCCAGTTCCTCCTTaGGCAGGAACACTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LYYMSSGRLHKALGARQSRPVPP*AGTLWL
Trigger: AAGCCAAAGTGTTCCTGCTCAAGGAGGAACTGGCCT...TGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp TCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGCAGTTCTTTATTACATaGGCTCAGGCCGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: SGRLHKALGARQSALISWQFFIT*AQAVCT
Trigger: TGTGCAGACGGCCTGAGCTCATGTAATAAAGAACTG...CCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR GCA 90 bp CTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCATTGATCTTCTTCCGCTaGTTCCGGACAGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: LYYMSSGRLHKALGARQSLIFFR*FRTATF
Trigger: GAAGGTGGCTGTCCGGAAGCAGCGGAAGAAGATCAA...TGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp CTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAAGTTCATTCCGCTCCTaGAGGATCTGCTCAAACTCC +
Preference number: 4 (lower is better)
Translates to: LYYMSSGRLHKALGARQSSSFRS*RICSNS
Trigger: GGAGTTTGAGCAGATCCTTCAGGAGCGGAATGAACT...TGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCAGTTCTTTATTACATaGGCTCAGGCCGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: YYMSSGRLHKALGARQSAQFFIT*AQAVCT
Trigger: TGTGCAGACGGCCTGAGCTCATGTAATAAAGAACTG...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR TCA 90 bp TGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACGGAACACTTTGGCTTTaGGTTCATTCCGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: CTKPWELGSQLSFHGWGNGTLWL*VHSAPE
Trigger: TTCAGGAGCGGAATGAACTCAAAGCCAAAGTGTTCC...GTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS GCA 90 bp GGAGTCGCGGCTTCGCCAGGCTGCTGGCGCTCCCTCTCGCGGTCCTaGGCGGCGCGCAGCTGGGTCTGCATGGCCGCCAGCTTGTGCCGC +
Preference number: 5 (lower is better)
Translates to: GVAASPGCWRSLSRS*AARSWVCMAASLCR
Trigger: GCGGCACAAGCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCAGGACCGCGAGAGGGAGCGCCAGCAGCCTGGCGAAGCCGCGACTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS GCA 90 bp CCCCGCGCTCGCTCTTTAGCCTGCGGAGTCGCGGCTTCGCCAGGCTaGTGGCGCTCCCTCTCGCGGTCCTGCGCGGCGCGCAGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: PRARSLACGVAASPG*WRSLSRSCAARSWV
Trigger: GACCCAGCTGCGCGCCGCGCAGGACCGCGAGAGGGAGCGCCAGCAGCCTGGCGAAGCCGCGACTCCGCAGGCTAAAGAGCGAGCGCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS CCA 90 bp CGCGCTCGCTCTTTAGCCTGCGGAGTCGCGGCTTCGCCAGGCTGCTaGCGCTCCCTCTCGCGGTCCTGCGCGGCGCGCAGCTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: RARSLACGVAASPGC*RSLSRSCAARSWVC
Trigger: GCAGACCCAGCTGCGCGCCGCGCAGGACCGCGAGAGGGAGCGCCAGCAGCCTGGCGAAGCCGCGACTCCGCAGGCTAAAGAGCGAGCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS CCA 90 bp CGGCGCGCCAGATCCTGCAGCTCAGTGCCCAGGGCCCCGGCTAGATaGTACACAAGCTCCGCGGCCGATGCCGACCCCGCGGCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: RRARSCSSVPRAPAR*YTSSAADADPAASR
Trigger: TCGGGAGGCCGCGGGGTCGGCATCGGCCGCGGAGCTTGTGTACCATCTAGCCGGGGCCCTGGGCACTGAGCTGCAGGATCTGGCGCGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS CCA 90 bp GGCGCTCCCTCTCGCGGTCCTGCGCGGCGCGCAGCTGGGTCTGCATaGCCGCCAGCTTGTGCCGCAGCTCAGCGTTCACCAGCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: GAPSRGPARRAAGSA*PPACAAAQRSPAGG
Trigger: GCCTCCTGCTGGTGAACGCTGAGCTGCGGCACAAGCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCAGGACCGCGAGAGGGAGCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS CCA 90 bp CCAGGCTGCTGGCGCTCCCTCTCGCGGTCCTGCGCGGCGCGCAGCTaGGTCTGCATGGCCGCCAGCTTGTGCCGCAGCTCAGCGTTCACC +
Preference number: 5 (lower is better)
Translates to: PGCWRSLSRSCAARS*VCMAASLCRSSAFT
Trigger: GGTGAACGCTGAGCTGCGGCACAAGCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCAGGACCGCGAGAGGGAGCGCCAGCAGCCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS GCA 90 bp CCGCCGCCTCCGGCCCGAAACGGCGCGCCAGATCCTGCAGCTCAGTaGCCAGGGCCCCGGCTAGATGGTACACAAGCTCCGCGGCCGATG +
Preference number: 5 (lower is better)
Translates to: PPPPARNGAPDPAAQ*PGPRLDGTQAPRPM
Trigger: CATCGGCCGCGGAGCTTGTGTACCATCTAGCCGGGGCCCTGGGCACTGAGCTGCAGGATCTGGCGCGCCGTTTCGGGCCGGAGGCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS GCA 90 bp ACCAGCCCGGCCGCCGCCTCCGGCCCGAAACGGCGCGCCAGATCCTaGAGCTCAGTGCCCAGGGCCCCGGCTAGATGGTACACAAGCTCC +
Preference number: 5 (lower is better)
Translates to: TSPAAASGPKRRARS*SSVPRAPARWYTSS
Trigger: GGAGCTTGTGTACCATCTAGCCGGGGCCCTGGGCACTGAGCTGCAGGATCTGGCGCGCCGTTTCGGGCCGGAGGCGGCGGCCGGGCTGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS GCA 90 bp CGGTCCTGCGCGGCGCGCAGCTGGGTCTGCATGGCCGCCAGCTTGTaGCGCAGCTCAGCGTTCACCAGCAGGAGGCGCTGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RSCAARSWVCMAASL*RSSAFTSRRRCSCS
Trigger: GGAGCAGCTGCAGCGCCTCCTGCTGGTGAACGCTGAGCTGCGGCACAAGCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCAGGACCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000622136.2
ENST00000631766.1
CDS GCA 90 bp TGCTGGCGCTCCCTCTCGCGGTCCTGCGCGGCGCGCAGCTGGGTCTaGATGGCCGCCAGCTTGTGCCGCAGCTCAGCGTTCACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: CWRSLSRSCAARSWV*MAASLCRSSAFTSR
Trigger: CCTGCTGGTGAACGCTGAGCTGCGGCACAAGCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCAGGACCGCGAGAGGGAGCGCCAGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS GCA 90 bp TGCAACGCCTCGGTCTCCTGGCCGCGCTGCCGCAGGTCGCGGTTGTaGGCCCGGAGTTCGTCCCGCTGTCGGTCCGTGACCTCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: CNASVSWPRCRRSRL*ARSSSRCRSVTSLS
Trigger: GCTCAAGGAGGTCACGGACCGACAGCGGGACGAACTCCGGGCGCACAACCGCGACCTGCGGCAGCGCGGCCAGGAGACCGAGGCGTTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS GCA 90 bp TCCCGACTGAAGCGGCACTGCCCTGCCTCCGAGGGGCGCCCGAGCTaGTGCGCGGCCTCCGCCTTTGGAAGGACAGGCACAGTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: SRLKRHCPASEGRPS*CAASAFGRTGTVRG
Trigger: CCCTCTGACTGTGCCTGTCCTTCCAAAGGCGGAGGCCGCGCAGCAGCTCGGGCGCCCCTCGGAGGCAGGGCAGTGCCGCTTCAGTCGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS-3UTR CAA 90 bp GATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCTGCCGCAGGTCGCGGTaGTGCGCCCGGAGTTCGTCC +
Preference number: 5 (lower is better)
Translates to: DAGQDWGRPLARAVKAGACRRSR*CARSSS
Trigger: GGACGAACTCCGGGCGCACAACCGCGACCTGCGGCA...GGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS GCA 90 bp CACCTCCCCGCTTCCTGGCCGACCTGCTGTGCAGCATGCAAACCTTaGTTGAGTGCCCACCGAGGGCTGGACGCTGCGTCCTGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: HLPASWPTCCAACKP*LSAHRGLDAASWAG
Trigger: CCCAGCCCAGGACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCGGGGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS CCA 90 bp GAGGCCGGCCGGGGGCGCAGATCTGTCTGCCACCTCCCCGCTTCCTaGCCGACCTGCTGTGCAGCATGCAAACCTTGCTTGAGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: EAGRGRRSVCHLPAS*PTCCAACKPCLSAH
Trigger: GTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCGGGGAGGTGGCAGACAGATCTGCGCCCCCGGCCGGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS TCA 90 bp TCCCCGCTTCCTGGCCGACCTGCTGTGCAGCATGCAAACCTTGCTTaGGTGCCCACCGAGGGCTGGACGCTGCGTCCTGGGCTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: SPLPGRPAVQHANLA*VPTEGWTLRPGLGP
Trigger: AGGACCCAGCCCAGGACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS GCA 90 bp CGCTTCCTGGCCGACCTGCTGTGCAGCATGCAAACCTTGCTTGAGTaGCCACCGAGGGCTGGACGCTGCGTCCTGGGCTGGGTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: RFLADLLCSMQTLLE*PPRAGRCVLGWVLA
Trigger: GGCAAGGACCCAGCCCAGGACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS GCA 90 bp CGGGGGCGCAGATCTGTCTGCCACCTCCCCGCTTCCTGGCCGACCTaGTGTGCAGCATGCAAACCTTGCTTGAGTGCCCACCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: RGRRSVCHLPASWPT*CAACKPCLSAHRGL
Trigger: CAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCGGGGAGGTGGCAGACAGATCTGCGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS CCA 90 bp ACCTTGCTTGAGTGCCCACCGAGGGCTGGACGCTGCGTCCTGGGCTaGGTCCTTGCCCTCATACGGCACTCACCGGGTCCTCAGGGTTCC +
Preference number: 5 (lower is better)
Translates to: TLLECPPRAGRCVLG*VLALIRHSPGPQGS
Trigger: GGAACCCTGAGGACCCGGTGAGTGCCGTATGAGGGCAAGGACCCAGCCCAGGACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS-3UTR CAA 90 bp TGCCCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGTCTTCTCCCCCTAGCTaGCTGGGTGCAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CPDAGQDWGRPLARAVKASSPPS*LGAGLL
Trigger: CAGCAGCCCTGCACCCAGCAAGCTAGGGGGAGAAGA...CGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS GCA 90 bp TCTGTCTGCCACCTCCCCGCTTCCTGGCCGACCTGCTGTGCAGCATaGAAACCTTGCTTGAGTGCCCACCGAGGGCTGGACGCTGCGTCC +
Preference number: 5 (lower is better)
Translates to: SVCHLPASWPTCCAA*KPCLSAHRGLDAAS
Trigger: GGACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCGGGGAGGTGGCAGACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS GCA 90 bp GCGCAGATCTGTCTGCCACCTCCCCGCTTCCTGGCCGACCTGCTGTaGAGCATGCAAACCTTGCTTGAGTGCCCACCGAGGGCTGGACGC +
Preference number: 5 (lower is better)
Translates to: AQICLPPPRFLADLL*SMQTLLECPPRAGR
Trigger: GCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCGGGGAGGTGGCAGACAGATCTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS GCA 90 bp TGCAGCATGCAAACCTTGCTTGAGTGCCCACCGAGGGCTGGACGCTaGGTCCTGGGCTGGGTCCTTGCCCTCATACGGCACTCACCGGGT +
Preference number: 5 (lower is better)
Translates to: CSMQTLLECPPRAGR*VLGWVLALIRHSPG
Trigger: ACCCGGTGAGTGCCGTATGAGGGCAAGGACCCAGCCCAGGACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS CCA 90 bp AGTCAGGCCTCTGGGGCGGCTGAGGCCCCCAGACAAAGGTGTTCGTaGAGGGCAGAACAGGGCGGATCAGGAGCTGGAGACTGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: SQASGAAEAPRQRCS*RAEQGGSGAGDCGW
Trigger: CCAACCACAGTCTCCAGCTCCTGATCCGCCCTGTTCTGCCCTCCACGAACACCTTTGTCTGGGGGCCTCAGCCGCCCCAGAGGCCTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000574810.5
ENST00000622136.2
ENST00000632939.1
ENST00000633176.1
CDS-3UTR CAA 90 bp GATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCGAGCCCTGTCCTCATTaGAGGCCACACATCCTTCCA +
Preference number: 5 (lower is better)
Translates to: DAGQDWGRPLARAVKAGAEPCPH*RPHILP
Trigger: TGGAAGGATGTGTGGCCTCAAATGAGGACAGGGCTC...GGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CAA 90 bp AGAGGGAGGCGGGCTGAGACCCCGTCCTGCCCTGATGCAGGCCAGGATTGGGGCGAGCCCTGTCCTCATTaGAGGCCACACATCCTTCCA +
Preference number: 5 (lower is better)
Translates to: RGRRAETPSCPDAGQDWGEPCPH*RPHILP
Trigger: TGGAAGGATGTGTGGCCTCAAATGAGGACAGGGCTC...GCCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGCCCGCCTCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS TCA 90 bp CAGACCCCTGGCGAGGGCTGTGAAGGCGGGAGCCCTGTCCTCATTTaGGGCCACACATCCTTCCACAGCCAGACCCCTAAGTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: QTPGEGCEGGSPVLI*GHTSFHSQTPKSGL
Trigger: GAGGCCTGACTTAGGGGTCTGGCTGTGGAAGGATGTGTGGCCTCAAATGAGGACAGGGCTCCCGCCTTCACAGCCCTCGCCAGGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000574810.5
ENST00000622136.2
ENST00000632939.1
ENST00000633176.1
CDS-3UTR CAA 90 bp ATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTCGGTCCGTGACCTCCTaGAGCTGCCGCAGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: MSSGRLHKALGARQSALIRSVTS*SCRSSA
Trigger: CGCGCTGCTGCGGCAGCTCAAGGAGGTCACGGACCG...AATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CAA 90 bp AGAGGGAGGCGGGCTGAGACCCCGTCCTGCCCTGATGCAGGCCAGGATTGGGGCGGTGTCCCTAACATCTaGGCCTTGATCTTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: RGRRAETPSCPDAGQDWGGVPNI*ALIFFR
Trigger: GCGGAAGAAGATCAAGGCCAAGATGTTAGGGACACC...GCCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGCCCGCCTCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CAA 90 bp CTGAGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACCGGTCCGTGACCTCCTaGAGCTGCCGCAGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: LRLREALLYLAPEARYRDRSVTS*SCRSSA
Trigger: CGCGCTGCTGCGGCAGCTCAAGGAGGTCACGGACCG...GTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CAA 90 bp TGCCCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGGGTGTCCCTAACATCTaGGCCTTGATCTTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: CPDAGQDWGRPLARAVKAGVPNI*ALIFFR
Trigger: GCGGAAGAAGATCAAGGCCAAGATGTTAGGGACACC...CGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CAA 90 bp TGCCCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGAAGAAACTCTGTATTTaGGACTCCGGGGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: CPDAGQDWGRPLARAVKAKKLCI*DSGGGG
Trigger: TCCCCCACCCCCGGAGTCCAAAATACAGAGTTTCTT...CGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CAA 90 bp CTTTATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCATGCCGCAGGTCGCGGTaGTGCGCCCGGAGTTCGTCC +
Preference number: 5 (lower is better)
Translates to: LYYMSSGRLHKALGARQSCRRSR*CARSSS
Trigger: GGACGAACTCCGGGCGCACAACCGCGACCTGCGGCA...TGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CAA 90 bp AGAGGGAGGCGGGCTGAGACCCCGTCCTGCCCTGATGCAGGCCAGGATTGGGGCTTGAGCAGGAACACTTaGGCTTTGAGTTCATTCCGC +
Preference number: 5 (lower is better)
Translates to: RGRRAETPSCPDAGQDWGLSRNT*ALSSFR
Trigger: GCGGAATGAACTCAAAGCCAAAGTGTTCCTGCTCAA...GCCCCAATCCTGGCCTGCATCAGGGCAGGACGGGGTCTCAGCCCGCCTCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CAA 90 bp TGCCCTGATGCAGGCCAGGATTGGGGCAGACCCCTGGCGAGGGCTGTGAAGGCGCCTAACATCTTGGCCTaGATCTTCTTCCGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: CPDAGQDWGRPLARAVKAPNILA*IFFRCF
Trigger: GAAGCAGCGGAAGAAGATCAAGGCCAAGATGTTAGG...CGCCTTCACAGCCCTCGCCAGGGGTCTGCCCCAATCCTGGCCTGCATCAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS GCA 90 bp GCTTCCTCTGGTGTCCCTAACATCTTGGCCTTGATCTTCTTCCGCTaGTTCCGGACAGCCACCTTCATGGCCTCGAGCAGAAGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: ASSGVPNILALIFFR*FRTATFMASSRRPG
Trigger: CCCCGGCCTTCTGCTCGAGGCCATGAAGGTGGCTGTCCGGAAGCAGCGGAAGAAGATCAAGGCCAAGATGTTAGGGACACCAGAGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000632939.1
ENST00000633176.1
CDS-3UTR CAA 90 bp CAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGAGAGTGCATGGCCGCCAGCTaGTGCCGCAGCTCAGCGTTC +
Preference number: 5 (lower is better)
Translates to: QRGTLISGPRGSVQRRRECMAAS*CRSSAF
Trigger: GAACGCTGAGCTGCGGCACAAGCTGGCGGCCATGCA...CTCTCTACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CAA 90 bp ATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCTTCTCCCCCTAGCTaGCTGGGTGCAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: MSSGRLHKALGARQSALISSPPS*LGAGLL
Trigger: CAGCAGCCCTGCACCCAGCAAGCTAGGGGGAGAAGA...AATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CAA 90 bp CAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATCTTCTCCCCCTAGCTaGCTGGGTGCAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QAVCTKPWELGSQLSFHGSSPPS*LGAGLL
Trigger: CAGCAGCCCTGCACCCAGCAAGCTAGGGGGAGAAGA...TCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS CCA 90 bp GTTGGGCCTCCTCTTCTCCCCCTAGCTTGCTGGGTGCAGGGCTGCTaGTCTCATCCTCAGAGGATTCAGCTTTACCCCGATACCATAGGC +
Preference number: 5 (lower is better)
Translates to: VGPPLLPLACWVQGC*SHPQRIQLYPDTIG
Trigger: GCCTATGGTATCGGGGTAAAGCTGAATCCTCTGAGGATGAGACCAGCAGCCCTGCACCCAGCAAGCTAGGGGGAGAAGAGGAGGCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000632939.1
ENST00000633176.1
CDS CCA 90 bp GAGCTGGAGACTGTGGTTGGGCCTCCTCTTCTCCCCCTAGCTTGCTaGGTGCAGGGCTGCTGGTCTCATCCTCAGAGGATTCAGCTTTAC +
Preference number: 5 (lower is better)
Translates to: ELETVVGPPLLPLAC*VQGCWSHPQRIQLY
Trigger: GTAAAGCTGAATCCTCTGAGGATGAGACCAGCAGCCCTGCACCCAGCAAGCTAGGGGGAGAAGAGGAGGCCCAACCACAGTCTCCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000632939.1
ENST00000633176.1
CDS-3UTR CAA 90 bp TCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGGGGGGATGGTCTCCCTaGTCATCGGAGAGCAGGATC +
Preference number: 5 (lower is better)
Translates to: SGRLHKALGARQSALISWGGWSP*SSESRI
Trigger: GATCCTGCTCTCCGATGACAAGGGAGACCATCCCCC...CCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS GCA 90 bp GTGGTTGGGCCTCCTCTTCTCCCCCTAGCTTGCTGGGTGCAGGGCTaGTGGTCTCATCCTCAGAGGATTCAGCTTTACCCCGATACCATA +
Preference number: 5 (lower is better)
Translates to: VVGPPLLPLACWVQG*WSHPQRIQLYPDTI
Trigger: TATGGTATCGGGGTAAAGCTGAATCCTCTGAGGATGAGACCAGCAGCCCTGCACCCAGCAAGCTAGGGGGAGAAGAGGAGGCCCAACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000632939.1
ENST00000633176.1
CDS-3UTR CAA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTGGGGGATGGTCTCCCTaGTCATCGGAGAGCAGGATC +
Preference number: 5 (lower is better)
Translates to: YYMSSGRLHKALGARQSAGGWSP*SSESRI
Trigger: GATCCTGCTCTCCGATGACAAGGGAGACCATCCCCC...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CAA 90 bp TGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACTCTTCTCCCCCTAGCTaGCTGGGTGCAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CTKPWELGSQLSFHGWGNSSPPS*LGAGLL
Trigger: CAGCAGCCCTGCACCCAGCAAGCTAGGGGGAGAAGA...GTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS TCA 90 bp CAAAGCTGCTCTCTGCTTCCTCTGGTGTCCCTAACATCTTGGCCTTaGTCTTCTTCCGCTGCTTCCGGACAGCCACCTTCATGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: QSCSLLPLVSLTSWP*SSSAASGQPPSWPR
Trigger: TCGAGGCCATGAAGGTGGCTGTCCGGAAGCAGCGGAAGAAGATCAAGGCCAAGATGTTAGGGACACCAGAGGAAGCAGAGAGCAGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000573398.1
ENST00000574810.5
ENST00000631766.1
ENST00000633176.1
CDS-3UTR CAA 90 bp TCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGGGTGTCCCTAACATCTaGGCCTTGATCTTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: SGRLHKALGARQSALISWGVPNI*ALIFFR
Trigger: GCGGAAGAAGATCAAGGCCAAGATGTTAGGGACACC...CCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS TCA 90 bp TCCTCCTTGAGCAGGAACACTTTGGCTTTGAGTTCATTCCGCTCCTaGAGGATCTGCTCAAACTCCTCCCGACTGAAGCGGCACTGCCCT +
Preference number: 5 (lower is better)
Translates to: SSLSRNTLALSSFRS*RICSNSSRLKRHCP
Trigger: AGGGCAGTGCCGCTTCAGTCGGGAGGAGTTTGAGCAGATCCTTCAGGAGCGGAATGAACTCAAAGCCAAAGTGTTCCTGCTCAAGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000632939.1
ENST00000633176.1
CDS-3UTR CAA 90 bp TATTACATGAGCTCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTAAGAAACTCTGTATTTaGGACTCCGGGGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: YYMSSGRLHKALGARQSAKKLCI*DSGGGG
Trigger: TCCCCCACCCCCGGAGTCCAAAATACAGAGTTTCTT...AGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGAGCTCATGTAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS-3UTR CAA 90 bp TGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACGAGCCCTGTCCTCATTaGAGGCCACACATCCTTCCA +
Preference number: 5 (lower is better)
Translates to: CTKPWELGSQLSFHGWGNEPCPH*RPHILP
Trigger: TGGAAGGATGTGTGGCCTCAAATGAGGACAGGGCTC...GTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CAA 90 bp TCAGGCCGTCTGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGTTGAGCAGGAACACTTaGGCTTTGAGTTCATTCCGC +
Preference number: 5 (lower is better)
Translates to: SGRLHKALGARQSALISWLSRNT*ALSSFR
Trigger: GCGGAATGAACTCAAAGCCAAAGTGTTCCTGCTCAA...CCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCAGACGGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CAA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTAGGTGTCCCTAACATCTaGGCCTTGATCTTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: RLREALLYLAPEARYRDVGVPNI*ALIFFR
Trigger: GCGGAAGAAGATCAAGGCCAAGATGTTAGGGACACC...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CAA 90 bp CTGAGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACTTGAGCAGGAACACTTaGGCTTTGAGTTCATTCCGC +
Preference number: 5 (lower is better)
Translates to: LRLREALLYLAPEARYRDLSRNT*ALSSFR
Trigger: GCGGAATGAACTCAAAGCCAAAGTGTTCCTGCTCAA...GTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CAA 90 bp CACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACTGCCTAACATCTTGGCCTaGATCTTCTTCCGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: HKALGARQSALISWMGKLPNILA*IFFRCF
Trigger: GAAGCAGCGGAAGAAGATCAAGGCCAAGATGTTAGG...CAGTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CAA 90 bp TGCACAAAGCCCTGGGAGCTAGGCAGTCAGCTCTCATTTCATGGATGGGGAAACCCTAACATCTTGGCCTaGATCTTCTTCCGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: CTKPWELGSQLSFHGWGNPNILA*IFFRCF
Trigger: GAAGCAGCGGAAGAAGATCAAGGCCAAGATGTTAGG...GTTTCCCCATCCATGAAATGAGAGCTGACTGCCTAGCTCCCAGGGCTTTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CAA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTACCTAACATCTTGGCCTaGATCTTCTTCCGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RLREALLYLAPEARYRDVPNILA*IFFRCF
Trigger: GAAGCAGCGGAAGAAGATCAAGGCCAAGATGTTAGG...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS-3UTR CAA 90 bp AGACTCAGAGAGGCACTCTTATATCTGGCCCCAGAGGCTCGGTACAGAGACGTATTGAGCAGGAACACTTaGGCTTTGAGTTCATTCCGC +
Preference number: 5 (lower is better)
Translates to: RLREALLYLAPEARYRDVLSRNT*ALSSFR
Trigger: GCGGAATGAACTCAAAGCCAAAGTGTTCCTGCTCAA...TACGTCTCTGTACCGAGCCTCTGGGGCCAGATATAAGAGTGCCTCTCTGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000574810.5
ENST00000622136.2
ENST00000633176.1
CDS GCA 72 bp GGCCGCCCGGCCTGCCCCCGCGCTCGCTCTTTAGCCTaGGGAGTCGCGGCTTCGCCAGGCTGCTGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: GRPACPRARSLA*GVAASPGCWRS
Trigger: GGAGCGCCAGCAGCCTGGCGAAGCCGCGACTCCGCAGGCTAAAGAGCGAGCGCGGGGGCAGGCCGGGCGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS GCA 72 bp GCTTCGCCAGGCTGCTGGCGCTCCCTCTCGCGGTCCTaGGCGGCGCGCAGCTGGGTCTGCATGGCCGCCAGC +
Preference number: 6 (lower is better)
Translates to: ASPGCWRSLSRS*AARSWVCMAAS
Trigger: GCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCAGGACCGCGAGAGGGAGCGCCAGCAGCCTGGCGAAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS GCA 72 bp AAGCGGCACTGCCCTGCCTCCGAGGGGCGCCCGAGCTaGTGCGCGGCCTCCGCCGGGTCCTCAGGGTTCCCT +
Preference number: 6 (lower is better)
Translates to: KRHCPASEGRPS*CAASAGSSGFP
Trigger: AGGGAACCCTGAGGACCCGGCGGAGGCCGCGCAGCAGCTCGGGCGCCCCTCGGAGGCAGGGCAGTGCCGCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS GCA 72 bp CGCTCTTTAGCCTGCGGAGTCGCGGCTTCGCCAGGCTaGTGGCGCTCCCTCTCGCGGTCCTGCGCGGCGCGC +
Preference number: 6 (lower is better)
Translates to: RSLACGVAASPG*WRSLSRSCAAR
Trigger: GCGCGCCGCGCAGGACCGCGAGAGGGAGCGCCAGCAGCCTGGCGAAGCCGCGACTCCGCAGGCTAAAGAGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS CCA 72 bp AGGCGCTGCAGCTGCTCCTGCAACGCCTCGGTCTCCTaGCCGCGCTGCCGCAGGTCGCGGTTGTGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: RRCSCSCNASVS*PRCRRSRLCAR
Trigger: CCGGGCGCACAACCGCGACCTGCGGCAGCGCGGCCAGGAGACCGAGGCGTTGCAGGAGCAGCTGCAGCGCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS CAA 72 bp GCCTCGGTCTCCTGGCCGCGCTGCCGCAGGTCGCGGTaGTGCGCCCGGAGTTCGTCCCGCTGTCGGTCCGTG +
Preference number: 6 (lower is better)
Translates to: ASVSWPRCRRSR*CARSSSRCRSV
Trigger: CACGGACCGACAGCGGGACGAACTCCGGGCGCACAACCGCGACCTGCGGCAGCGCGGCCAGGAGACCGAGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS CAA 90 bp CGGTTGTGCGCCCGGAGTTCGTCCCGCTGTCGGTCCGTGACCTCCTaGAGCTGCCGCAGCAGCGCGCGCTCCTCCTGTGGCCCCGCGCGC +
Preference number: 6 (lower is better)
Translates to: RLCARSSSRCRSVTS*SCRSSARSSCGPAR
Trigger: GCGCGCGGGGCCACAGGAGGAGCGCGCGCTGCTGCGGCAGCTCAAGGAGGTCACGGACCGACAGCGGGACGAACTCCGGGCGCACAACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS GCA 72 bp TCGGTCTCCTGGCCGCGCTGCCGCAGGTCGCGGTTGTaGGCCCGGAGTTCGTCCCGCTGTCGGTCCGTGACC +
Preference number: 6 (lower is better)
Translates to: SVSWPRCRRSRL*ARSSSRCRSVT
Trigger: GGTCACGGACCGACAGCGGGACGAACTCCGGGCGCACAACCGCGACCTGCGGCAGCGCGGCCAGGAGACCGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS CCA 72 bp TGGCGCTCCCTCTCGCGGTCCTGCGCGGCGCGCAGCTaGGTCTGCATGGCCGCCAGCTTGTGCCGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: WRSLSRSCAARS*VCMAASLCRSS
Trigger: TGAGCTGCGGCACAAGCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCAGGACCGCGAGAGGGAGCGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS CCA 72 bp TCTTTAGCCTGCGGAGTCGCGGCTTCGCCAGGCTGCTaGCGCTCCCTCTCGCGGTCCTGCGCGGCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: SLACGVAASPGC*RSLSRSCAARS
Trigger: GCTGCGCGCCGCGCAGGACCGCGAGAGGGAGCGCCAGCAGCCTGGCGAAGCCGCGACTCCGCAGGCTAAAGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS CAA 90 bp TCGCGGTCCTGCGCGGCGCGCAGCTGGGTCTGCATGGCCGCCAGCTaGTGCCGCAGCTCAGCGTTCACCAGCAGGAGGCGCTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SRSCAARSWVCMAAS*CRSSAFTSRRRCSC
Trigger: GCAGCTGCAGCGCCTCCTGCTGGTGAACGCTGAGCTGCGGCACAAGCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCAGGACCGCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000622136.2
ENST00000631766.1
CDS GCA 72 bp AGTTCGTCCCGCTGTCGGTCCGTGACCTCCTTGAGCTaGCGCAGCAGCGCGCGCTCCTCCTGTGGCCCCGCG +
Preference number: 6 (lower is better)
Translates to: SSSRCRSVTSLS*RSSARSSCGPA
Trigger: CGCGGGGCCACAGGAGGAGCGCGCGCTGCTGCGGCAGCTCAAGGAGGTCACGGACCGACAGCGGGACGAACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS GCA 72 bp TCCCTCTCGCGGTCCTGCGCGGCGCGCAGCTGGGTCTaGATGGCCGCCAGCTTGTGCCGCAGCTCAGCGTTC +
Preference number: 6 (lower is better)
Translates to: SLSRSCAARSWV*MAASLCRSSAF
Trigger: GAACGCTGAGCTGCGGCACAAGCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCAGGACCGCGAGAGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS GCA 72 bp CTGCTCAAACTCCTCCCGACTGAAGCGGCACTGCCCTaGCTCCGAGGGGCGCCCGAGCTGCTGCGCGGCCTC +
Preference number: 6 (lower is better)
Translates to: LLKLLPTEAALP*LRGAPELLRGL
Trigger: GAGGCCGCGCAGCAGCTCGGGCGCCCCTCGGAGGCAGGGCAGTGCCGCTTCAGTCGGGAGGAGTTTGAGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000632939.1
ENST00000633176.1
CDS GCA 72 bp AAGCGGCACTGCCCTGCCTCCGAGGGGCGCCCGAGCTaGTGCGCGGCCTCCGCCTTTGGAAGGACAGGCACA +
Preference number: 6 (lower is better)
Translates to: KRHCPASEGRPS*CAASAFGRTGT
Trigger: TGTGCCTGTCCTTCCAAAGGCGGAGGCCGCGCAGCAGCTCGGGCGCCCCTCGGAGGCAGGGCAGTGCCGCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS CAA 72 bp GCCCGGAGTTCGTCCCGCTGTCGGTCCGTGACCTCCTaGAGCTGCCGCAGCAGCGCGCGCTCCTCCTGTGGC +
Preference number: 6 (lower is better)
Translates to: ARSSSRCRSVTS*SCRSSARSSCG
Trigger: GCCACAGGAGGAGCGCGCGCTGCTGCGGCAGCTCAAGGAGGTCACGGACCGACAGCGGGACGAACTCCGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS CAA 72 bp TGCGCGGCGCGCAGCTGGGTCTGCATGGCCGCCAGCTaGTGCCGCAGCTCAGCGTTCACCAGCAGGAGGCGC +
Preference number: 6 (lower is better)
Translates to: CAARSWVCMAAS*CRSSAFTSRRR
Trigger: GCGCCTCCTGCTGGTGAACGCTGAGCTGCGGCACAAGCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS CAA 90 bp TCCTGCAACGCCTCGGTCTCCTGGCCGCGCTGCCGCAGGTCGCGGTaGTGCGCCCGGAGTTCGTCCCGCTGTCGGTCCGTGACCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SCNASVSWPRCRRSR*CARSSSRCRSVTSL
Trigger: CAAGGAGGTCACGGACCGACAGCGGGACGAACTCCGGGCGCACAACCGCGACCTGCGGCAGCGCGGCCAGGAGACCGAGGCGTTGCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301336.7
ENST00000622136.2
CDS CCA 72 bp TCTCGCGGTCCTGCGCGGCGCGCAGCTGGGTCTGCATaGCCGCCAGCTTGTGCCGCAGCTCAGCGTTCACCA +
Preference number: 6 (lower is better)
Translates to: SRGPARRAAGSA*PPACAAAQRSP
Trigger: TGGTGAACGCTGAGCTGCGGCACAAGCTGGCGGCCATGCAGACCCAGCTGCGCGCCGCGCAGGACCGCGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000633176.1
CDS CAA 90 bp TTGAGTGCCCACCGAGGGCTGGACGCTGCGTCCTGGGCTGGGTCCTaGCCCTCATACGGCACTCACCGGGTCCTCAGGGTTCCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: LSAHRGLDAASWAGS*PSYGTHRVLRVPWG
Trigger: GCCCCAGGGAACCCTGAGGACCCGGTGAGTGCCGTATGAGGGCAAGGACCCAGCCCAGGACGCAGCGTCCAGCCCTCGGTGGGCACTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS GCA 72 bp AGGATCTGCTCAAACTCCTCCCGACTGAAGCGGCACTaGCCTGCCTCCGAGGGGCGCCCGAGCTGCTGCGCG +
Preference number: 6 (lower is better)
Translates to: RICSNSSRLKRH*PASEGRPSCCA
Trigger: CGCGCAGCAGCTCGGGCGCCCCTCGGAGGCAGGGCAGTGCCGCTTCAGTCGGGAGGAGTTTGAGCAGATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000632939.1
ENST00000633176.1
CDS CCA 72 bp GAGTGCCCACCGAGGGCTGGACGCTGCGTCCTGGGCTaGGTCCTTGCCCTCATACGGCACTCACCGGGTCCT +
Preference number: 6 (lower is better)
Translates to: ECPPRAGRCVLG*VLALIRHSPGP
Trigger: AGGACCCGGTGAGTGCCGTATGAGGGCAAGGACCCAGCCCAGGACGCAGCGTCCAGCCCTCGGTGGGCACTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS CAA 90 bp CTCCCCGCTTCCTGGCCGACCTGCTGTGCAGCATGCAAACCTTGCTaGAGTGCCCACCGAGGGCTGGACGCTGCGTCCTGGGCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: LPASWPTCCAACKPC*SAHRGLDAASWAGS
Trigger: GGACCCAGCCCAGGACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS CAA 90 bp CCACCTCCCCGCTTCCTGGCCGACCTGCTGTGCAGCATGCAAACCTaGCTTGAGTGCCCACCGAGGGCTGGACGCTGCGTCCTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: PPPRFLADLLCSMQT*LECPPRAGRCVLGW
Trigger: CCAGCCCAGGACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCGGGGAGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS TCA 72 bp TCCGCTCCTGAAGGATCTGCTCAAACTCCTCCCGACTaGAGCGGCACTGCCCTGCCTCCGAGGGGCGCCCGA +
Preference number: 6 (lower is better)
Translates to: SAPEGSAQTPPD*SGTALPPRGAR
Trigger: TCGGGCGCCCCTCGGAGGCAGGGCAGTGCCGCTTCAGTCGGGAGGAGTTTGAGCAGATCCTTCAGGAGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000632939.1
ENST00000633176.1
CDS TCA 72 bp CCTGGCCGACCTGCTGTGCAGCATGCAAACCTTGCTTaGGTGCCCACCGAGGGCTGGACGCTGCGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: PGRPAVQHANLA*VPTEGWTLRPG
Trigger: CCCAGGACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS GCA 72 bp GCCGACCTGCTGTGCAGCATGCAAACCTTGCTTGAGTaGCCACCGAGGGCTGGACGCTGCGTCCTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: ADLLCSMQTLLE*PPRAGRCVLGW
Trigger: CCAGCCCAGGACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS GCA 72 bp CAAACCTTGCTTGAGTGCCCACCGAGGGCTGGACGCTaGGTCCTGGGCTGGGTCCTTGCCCTCATACGGCAC +
Preference number: 6 (lower is better)
Translates to: QTLLECPPRAGR*VLGWVLALIRH
Trigger: GTGCCGTATGAGGGCAAGGACCCAGCCCAGGACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS GCA 72 bp GCTTCCTGGCCGACCTGCTGTGCAGCATGCAAACCTTaGTTGAGTGCCCACCGAGGGCTGGACGCTGCGTCC +
Preference number: 6 (lower is better)
Translates to: ASWPTCCAACKP*LSAHRGLDAAS
Trigger: GGACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS GCA 72 bp CACCTCCCCGCTTCCTGGCCGACCTGCTGTGCAGCATaGAAACCTTGCTTGAGTGCCCACCGAGGGCTGGAC +
Preference number: 6 (lower is better)
Translates to: HLPASWPTCCAA*KPCLSAHRGLD
Trigger: GTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCGGGGAGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS GCA 72 bp TTGTGCCGCAGCTCAGCGTTCACCAGCAGGAGGCGCTaGAGCTGCTCCTGCAACTGGGAGCGGAGCAAAGGG +
Preference number: 6 (lower is better)
Translates to: LCRSSAFTSRRR*SCSCNWERSKG
Trigger: CCCTTTGCTCCGCTCCCAGTTGCAGGAGCAGCTGCAGCGCCTCCTGCTGGTGAACGCTGAGCTGCGGCACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573398.1
ENST00000631766.1
CDS CCA 72 bp TCTGGGGCGGCTGAGGCCCCCAGACAAAGGTGTTCGTaGAGGGCAGAACAGGGCGGATCAGGAGCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: SGAAEAPRQRCS*RAEQGGSGAGD
Trigger: GTCTCCAGCTCCTGATCCGCCCTGTTCTGCCCTCCACGAACACCTTTGTCTGGGGGCCTCAGCCGCCCCAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000574810.5
ENST00000622136.2
ENST00000632939.1
ENST00000633176.1
CDS CCA 72 bp CGGGGGCGCAGATCTGTCTGCCACCTCCCCGCTTCCTaGCCGACCTGCTGTGCAGCATGCAAACCTTGCTTG +
Preference number: 6 (lower is better)
Translates to: RGRRSVCHLPAS*PTCCAACKPCL
Trigger: CAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCGGGGAGGTGGCAGACAGATCTGCGCCCCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS CAA 72 bp TCCTGGCCGACCTGCTGTGCAGCATGCAAACCTTGCTaGAGTGCCCACCGAGGGCTGGACGCTGCGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SWPTCCAACKPC*SAHRGLDAASW
Trigger: CCAGGACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS CAA 72 bp CGCTTCCTGGCCGACCTGCTGTGCAGCATGCAAACCTaGCTTGAGTGCCCACCGAGGGCTGGACGCTGCGTC +
Preference number: 6 (lower is better)
Translates to: RFLADLLCSMQT*LECPPRAGRCV
Trigger: GACGCAGCGTCCAGCCCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS GCA 72 bp TGTCTGCCACCTCCCCGCTTCCTGGCCGACCTGCTGTaGAGCATGCAAACCTTGCTTGAGTGCCCACCGAGG +
Preference number: 6 (lower is better)
Translates to: CLPPPRFLADLL*SMQTLLECPPR
Trigger: CCTCGGTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCGGGGAGGTGGCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS GCA 72 bp AGATCTGTCTGCCACCTCCCCGCTTCCTGGCCGACCTaGTGTGCAGCATGCAAACCTTGCTTGAGTGCCCAC +
Preference number: 6 (lower is better)
Translates to: RSVCHLPASWPT*CAACKPCLSAH
Trigger: GTGGGCACTCAAGCAAGGTTTGCATGCTGCACAGCAGGTCGGCCAGGAAGCGGGGAGGTGGCAGACAGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS CAA 90 bp CAGGGCCATCATGGGAATGCTAGAGGAAGTGACGGGCCGGGAGACTaGGGGGACAAGGGTGCCCTAACAGATAACAGAGCAGTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: QGHHGNARGSDGPGD*GDKGALTDNRAVLQ
Trigger: CTGGAGCACTGCTCTGTTATCTGTTAGGGCACCCTTGTCCCCCAAGTCTCCCGGCCCGTCACTTCCTCTAGCATTCCCATGATGGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570858.5
ENST00000632939.1
CDS CAA 90 bp CCAAAGCTGCTCTCTGCTTCCTCTGGTGTCCCTAACATCTTGGCCTaGATCTTCTTCCGCTGCTTCCGGACAGCCACCTTCATGGCCTCG +
Preference number: 6 (lower is better)
Translates to: PKLLSASSGVPNILA*IFFRCFRTATFMAS
Trigger: CGAGGCCATGAAGGTGGCTGTCCGGAAGCAGCGGAAGAAGATCAAGGCCAAGATGTTAGGGACACCAGAGGAAGCAGAGAGCAGCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000573398.1
ENST00000574810.5
ENST00000631766.1
ENST00000633176.1
CDS GCA 72 bp GGTGTCCCTAACATCTTGGCCTTGATCTTCTTCCGCTaGTTCCGGACAGCCACCTTCATGGCCTCGAGCAGA +
Preference number: 6 (lower is better)
Translates to: GVPNILALIFFR*FRTATFMASSR
Trigger: TCTGCTCGAGGCCATGAAGGTGGCTGTCCGGAAGCAGCGGAAGAAGATCAAGGCCAAGATGTTAGGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000632939.1
ENST00000633176.1
CDS CAA 72 bp TCACTGCTCTCTGCTTCCTCTGGTGTCCCTAACATCTaGGCCTTGATCTTCTTCCGCTGCTTCCGGACAGCC +
Preference number: 6 (lower is better)
Translates to: SLLSASSGVPNI*ALIFFRCFRTA
Trigger: GGCTGTCCGGAAGCAGCGGAAGAAGATCAAGGCCAAGATGTTAGGGACACCAGAGGAAGCAGAGAGCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000622136.2
ENST00000632939.1
CDS CAA 72 bp AAGCTGCTCTCTGCTTCCTCTGGTGTCCCTAACATCTaGGCCTTGATCTTCTTCCGCTGCTTCCGGACAGCC +
Preference number: 6 (lower is better)
Translates to: KLLSASSGVPNI*ALIFFRCFRTA
Trigger: GGCTGTCCGGAAGCAGCGGAAGAAGATCAAGGCCAAGATGTTAGGGACACCAGAGGAAGCAGAGAGCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000573398.1
ENST00000574810.5
ENST00000631766.1
ENST00000633176.1
CDS TCA 72 bp AGCAGGAACACTTTGGCTTTGAGTTCATTCCGCTCCTaGAGGATCTGCTCAAACTCCTCCCGACTGAAGCGG +
Preference number: 6 (lower is better)
Translates to: SRNTLALSSFRS*RICSNSSRLKR
Trigger: CCGCTTCAGTCGGGAGGAGTTTGAGCAGATCCTTCAGGAGCGGAATGAACTCAAAGCCAAAGTGTTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301336.7
ENST00000570858.5
ENST00000573398.1
ENST00000574810.5
ENST00000622136.2
ENST00000631766.1
ENST00000632939.1
ENST00000633176.1