RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000080345

Ensembl transcript IDs: ENST00000243326.9, ENST00000414861.6, ENST00000428287.6, ENST00000430328.6, ENST00000444746.7, ENST00000453091.6, ENST00000454583.6, ENST00000457745.1, ENST00000467762.2, ENST00000484077.1, ENST00000494333.1, ENST00000498041.1

Found 780 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTAGGGGTGCTGAGGAAGATGCCTCTGGATATCCCAGGCTTGCAGTaGGGCTGTTGTGCAGCCCTCCACAACTCCCATCCTGCCCCAGGA +
Preference number: 1 (lower is better)
Translates to: LGVLRKMPLDIPGLQ*GCCAALHNSHPAPG
Trigger: TCCTGGGGCAGGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGATATCCAGAGGCATCTTCCTCAGCACCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR GCA 90 bp GAGGAAGATGCCTCTGGATATCCCAGGCTTGCAGTGGGGCTGTTGTaGAGCCCTCCACAACTCCCATCCTGCCCCAGGAAATGTGTGCCC +
Preference number: 1 (lower is better)
Translates to: EEDASGYPRLAVGLL*SPPQLPSCPRKCVP
Trigger: GGGCACACATTTCCTGGGGCAGGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGATATCCAGAGGCATCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR GCA 90 bp AGGCTTGCAGTGGGGCTGTTGTGCAGCCCTCCACAACTCCCATCCTaGCCCAGGAAATGTGTGCCCAATTCATCTCTGGGCTCACCTTGT +
Preference number: 1 (lower is better)
Translates to: RLAVGLLCSPPQLPS*PRKCVPNSSLGSPC
Trigger: ACAAGGTGAGCCCAGAGATGAATTGGGCACACATTTCCTGGGGCAGGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR GCA 90 bp AGACAGAGACTTGCTCTGTCGCGCAATGGCATGATCTCGGCTCACTaGAACCTCCGCCTAAAAGGTTCAAGCAATTCTCATGTCTCAGCC +
Preference number: 1 (lower is better)
Translates to: RQRLALSRNGMISAH*NLRLKGSSNSHVSA
Trigger: GGCTGAGACATGAGAATTGCTTGAACCTTTTAGGCGGAGGTTGCAGTGAGCCGAGATCATGCCATTGCGCGACAGAGCAAGTCTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR GCA 90 bp CATGAATCACCTGGGACTGTGTTTAAAAAGACTCACGGGGCCCAATaGAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAA +
Preference number: 1 (lower is better)
Translates to: HESPGTVFKKTHGAQ*RSTESESTCSYAHQ
Trigger: TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCCGTGAGTCTTTTTAAACACAGTCCCAGGTGATTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR CCA 90 bp TCAATATCCAATGTTCTAATCTTCCTGCCATCTGCTTGTGCTTGTTaGTCCAACGATACTAGGGAAGTCCTTTGTATATATCTCCACTAC +
Preference number: 1 (lower is better)
Translates to: SISNVLIFLPSACAC*SNDTREVLCIYLHY
Trigger: GTAGTGGAGATATATACAAAGGACTTCCCTAGTATCGTTGGACCAACAAGCACAAGCAGATGGCAGGAAGATTAGAACATTGGATATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR TCA 90 bp GTGACCAGAGGTCCGCAGTATAATGACAGGGCATATCTGCTAGACTaGCTTATTCATTATAGCACTACTAAATTTAACTGCCAGATTAAT +
Preference number: 1 (lower is better)
Translates to: VTRGPQYNDRAYLLD*LIHYSTTKFNCQIN
Trigger: ATTAATCTGGCAGTTAAATTTAGTAGTGCTATAATGAATAAGTCAGTCTAGCAGATATGCCCTGTCATTATACTGCGGACCTCTGGTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR TCA 90 bp TGCATTTGCAGATACAGTATCCTACAAATATGTGCAGCAAGCCCATaGAGCACTTCCACCGTCGATACTGATATTTCAGTATTTAATATA +
Preference number: 1 (lower is better)
Translates to: CICRYSILQICAASP*STSTVDTDISVFNI
Trigger: TATATTAAATACTGAAATATCAGTATCGACGGTGGAAGTGCTTCATGGGCTTGCTGCACATATTTGTAGGATACTGTATCTGCAAATGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR GCA 90 bp GGGCCTTCAGTCATGCTTTTAATGTGCGGGTTTAAATCCTGTTTTTaGCTGTATTATCCAACAGCATTATTTAACCTGATTCATCCTTTA +
Preference number: 1 (lower is better)
Translates to: GPSVMLLMCGFKSCF*LYYPTALFNLIHPL
Trigger: TAAAGGATGAATCAGGTTAAATAATGCTGTTGGATAATACAGGCAAAAACAGGATTTAAACCCGCACATTAAAAGCATGACTGAAGGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR CCA 90 bp GACTTACACTTTAACGGCTACTTGCAAAGAGCAATATGTAAAGCCTaGCACATAATATACTTATTAACTGGACATCAGAAAGCACGAAAC +
Preference number: 1 (lower is better)
Translates to: DLHFNGYLQRAICKA*HIIYLLTGHQKARN
Trigger: GTTTCGTGCTTTCTGATGTCCAGTTAATAAGTATATTATGTGCCAGGCTTTACATATTGCTCTTTGCAAGTAGCCGTTAAAGTGTAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR CAA 90 bp AGGCACCTAGGGGTGCTGAGGAAGATGCCTCTGGATATCCCAGGCTaGCAGTGGGGCTGTTGTGCAGCCCTCCACAACTCCCATCCTGCC +
Preference number: 2 (lower is better)
Translates to: RHLGVLRKMPLDIPG*QWGCCAALHNSHPA
Trigger: GGCAGGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGATATCCAGAGGCATCTTCCTCAGCACCCCTAGGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGAGGTGGAGGTTGCAGTaGGCTGAGATCGTACCACTG +
Preference number: 2 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGRWRLQ*AEIVPL
Trigger: CAGTGGTACGATCTCAGCTCACTGCAACCTCCACCT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGACCATTTTAGGAGGCTaGGGCAGGTGGATATCTGAG +
Preference number: 2 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGTILGG*GRWISE
Trigger: CTCAGATATCCACCTGCCTCAGCCTCCTAAAATGGT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGATTAACCAGTGGTGGTaGCAGGCACCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGINQWW*QAPVIP
Trigger: TGGGATTACAGGTGCCTGCCACCACCACTGGTTAAT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTCCTGGCTAACACAGTaGACCCCTTCTCTACTAAAA +
Preference number: 2 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGSWLTQ*TPSLLK
Trigger: TTTTAGTAGAGAAGGGGTTCACTGTGTTAGCCAGGA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAACTCCTGGGCCAAAGTaGTCCACCTGCCGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: GAQCRSTESESTCSYAHQTPGPK*STCRAF
Trigger: GAAGGCCCGGCAGGTGGATCACTTTGGCCCAGGAGT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CCA 90 bp TTAAATGTAAGGCACAGCCCACAGGCACCTAGGGGTGCTGAGGAAGATGCCTCTCATGGCGAAAACCCCTaGGAACATCGTCTAGTGTCT +
Preference number: 2 (lower is better)
Translates to: LNVRHSPQAPRGAEEDASHGENP*EHRLVS
Trigger: AGACACTAGACGATGTTCCCAGGGGTTTTCGCCATG...AGAGGCATCTTCCTCAGCACCCCTAGGTGCCTGTGGGCTGTGCCTTACATTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR-3UTR CCA 90 bp GGATATCCCAGGCTTGCAGTGGGGCTGTTGTGCAGCCCTCCACAACTCCCATCCCTGTTACTTCGTTGGTaGTATTGGGGAGAAAATATA +
Preference number: 2 (lower is better)
Translates to: GYPRLAVGLLCSPPQLPSLLLRW*YWGENI
Trigger: TATATTTTCTCCCCAATACCACCAACGAAGTAACAG...GGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACTGGGAGGCAGAGCTTaGAGTGAACCGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: GAQCRSTESESTCSYAHQLGGRA*SEPRSH
Trigger: GTGCGATCTCGGTTCACTGCAAGCTCTGCCTCCCAG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGGATTAAACTTTCTATaGCTTGCTGTAGAATGTGTG +
Preference number: 2 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGGLNFL*LAVECV
Trigger: CACACATTCTACAGCAAGTCATAGAAAGTTTAATCC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATGCTCTGTCGCGCAATaGCATGATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: GAQCRSTESESTCSYAHQCSVAQ*HDLGSL
Trigger: CAGTGAGCCGAGATCATGCCATTGCGCGACAGAGCA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTGTGCAGCAAGCCCATaGAGCACTTCCACCGTCGAT +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLCAASP*STSTVD
Trigger: ATCGACGGTGGAAGTGCTTCATGGGCTTGCTGCACA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAGGTGGAGGTTGCAGTaGGCTGAGATCGTACCACTG +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLRWRLQ*AEIVPL
Trigger: CAGTGGTACGATCTCAGCTCACTGCAACCTCCACCT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGCTGAGGCAGGAGAATaGTGTAAACCTGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLAEAGE*CKPGRQ
Trigger: CTGCCTCCCAGGTTTACACCATTCTCCTGCCTCAGC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAGGCAGGTGGATATCTaGGGTCAGAAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: GAQCRSTESESTCSYAHQRQVDI*GQKFET
Trigger: GGTCTCAAACTTCTGACCTCAGATATCCACCTGCCT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACTGAGATTACAAGTATaGGCCAACATGCCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: GAQCRSTESESTCSYAHQLRLQV*ANMPGW
Trigger: CCAGCCAGGCATGTTGGCGCATACTTGTAATCTCAG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR GCA 90 bp TGCCTGAACAGAGAGGTTGACTTGTTGAATCTGTCTTTTCTGTCTGACGTCTGTCCTGCCATCTGCTTGTaGTTGTTGGTCCAACGATAC +
Preference number: 2 (lower is better)
Translates to: CLNREVDLLNLSFLSDVCPAICL*LLVQRY
Trigger: GTATCGTTGGACCAACAAGCACAAGCAGATGGCAGG...ACAGACGTCAGACAGAAAAGACAGATTCAACAAGTCAACCTCTCTGTTCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR CAA 90 bp ATCCTGCCCCAGGAAATGTGTGCCCAATTCATCTCTGGGCTCACCTaGTATCTTAATCCCAAATCACAGCATGAAAGACTCATCTGTTAC +
Preference number: 2 (lower is better)
Translates to: ILPQEMCAQFISGLT*YLNPKSQHERLICY
Trigger: GTAACAGATGAGTCTTTCATGCTGTGATTTGGGATTAAGATACAAGGTGAGCCCAGAGATGAATTGGGCACACATTTCCTGGGGCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAGGCAGGTGGATATCTaGGGTCAGAAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLRQVDI*GQKFET
Trigger: GGTCTCAAACTTCTGACCTCAGATATCCACCTGCCT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCACCATTTTAGGAGGCTaGGGCAGGTGGATATCTGAG +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLTILGG*GRWISE
Trigger: CTCAGATATCCACCTGCCTCAGCCTCCTAAAATGGT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCATTAACCAGTGGTGGTaGCAGGCACCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLINQWW*QAPVIP
Trigger: TGGGATTACAGGTGCCTGCCACCACCACTGGTTAAT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATCCTGGCTAACACAGTaGACCCCTTCTCTACTAAAA +
Preference number: 2 (lower is better)
Translates to: GAQCRSTESESTCSYAHQSWLTQ*TPSLLK
Trigger: TTTTAGTAGAGAAGGGGTTCACTGTGTTAGCCAGGA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp TGCCCCAGGAAATGTGTGCCCAATTCATCTCTGGGCTCACCTTGTATCTTAATCCCACGTTTCCAAGAATaGCACTTAAAAACTGGCAAT +
Preference number: 2 (lower is better)
Translates to: CPRKCVPNSSLGSPCILIPRFQE*HLKTGN
Trigger: ATTGCCAGTTTTTAAGTGTCATTCTTGGAAACGTGG...GATTAAGATACAAGGTGAGCCCAGAGATGAATTGGGCACACATTTCCTGGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAACAAAAATTAACCAGTaGTGGTGGCAGGCACCTGTA +
Preference number: 2 (lower is better)
Translates to: GAQCRSTESESTCSYAHQTKINQ*WWQAPV
Trigger: TACAGGTGCCTGCCACCACCACTGGTTAATTTTTGT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATATCCTACAAATATGTaGAGCAAGCCCATGAAGCAC +
Preference number: 2 (lower is better)
Translates to: GAQCRSTESESTCSYAHQYPTNM*SKPMKH
Trigger: GTGCTTCATGGGCTTGCTGCACATATTTGTAGGATA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTGTGTTAAAGTAATCTaGTCCCCTCTGCCCCAAACA +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLCVKVI*SPLPQT
Trigger: TGTTTGGGGCAGAGGGGAGCAGATTACTTTAACACA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACTGTCCTTCAGGGTTTaGAATGTTATCAACTTTGCA +
Preference number: 2 (lower is better)
Translates to: GAQCRSTESESTCSYAHQLSFRV*NVINFA
Trigger: TGCAAAGTTGATAACATTTCAAACCCTGAAGGACAG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp CCAAATCACAGCATGAAAGACTCATCTGTTACTTCGTTGGTGGTATTGGGGAGACTGTCCTTCAGGGTTTaGAATGTTATCAACTTTGCA +
Preference number: 2 (lower is better)
Translates to: PNHSMKDSSVTSLVVLGRLSFRV*NVINFA
Trigger: TGCAAAGTTGATAACATTTCAAACCCTGAAGGACAG...TCTCCCCAATACCACCAACGAAGTAACAGATGAGTCTTTCATGCTGTGATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAATGCGCCAACATGCCTaGCTGGTTTTTGTATTTTTA +
Preference number: 2 (lower is better)
Translates to: GAQCRSTESESTCSYAHQMRQHA*LVFVFL
Trigger: TAAAAATACAAAAACCAGCCAGGCATGTTGGCGCAT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAAGAAGGTAAGGGTATaGACAGCAAAGTTGTGTAAC +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLKKVRV*TAKLCN
Trigger: GTTACACAACTTTGCTGTTCATACCCTTACCTTCTT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAATAGCCATAGCAAAATaGAGATTTAGCATGCTTGTC +
Preference number: 2 (lower is better)
Translates to: GAQCRSTESESTCSYAHQIAIAK*RFSMLV
Trigger: GACAAGCATGCTAAATCTTCATTTTGCTATGGCTAT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp GTTTTATATAAAGAGGATGTCTCACCAGGAACGGCTATCGGAAAGACACATTTCCCTGAACAGAGAGGTTaGCTTGTTGAATCTGTCTTT +
Preference number: 2 (lower is better)
Translates to: VLYKEDVSPGTAIGKTHFPEQRG*LVESVF
Trigger: AAAGACAGATTCAACAAGTCAACCTCTCTGTTCAGG...GAAATGTGTCTTTCCGATAGCCGTTCCTGGTGAGACATCCTCTTTATATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAAACTTTCTATGACTTaGTGTAGAATGTGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: GAQCRSTESESTCSYAHQKLSMT*CRMCAL
Trigger: CAAGGCACACATTCTACAGCAAGTCATAGAAAGTTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTTTGGTCACATTTTCTaGTATTACTGTTCGGCTTCC +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLFGHIF*YYCSAS
Trigger: GGAAGCCGAACAGTAATAGCAGAAAATGTGACCAAA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTCAACTGCTGCTGCATaGATATTTGCTAATGCAAAT +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLSTAAA*IFANAN
Trigger: ATTTGCATTAGCAAATATTCATGCAGCAGCAGTTGA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTGTTTCACCAGAATATaGACGGGTTTAAGAAAGCAT +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLCFTRI*TGLRKH
Trigger: ATGCTTTCTTAAACCCGTGCATATTCTGGTGAAACA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGTATTCACAATAAGCTaGAGAAAAACCCATGCAATT +
Preference number: 2 (lower is better)
Translates to: GAQCRSTESESTCSYAHQVFTIS*RKTHAI
Trigger: AATTGCATGGGTTTTTCTGCAGCTTATTGTGAATAC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR CAA 90 bp TCCATAAAAGGGATTGACAAACTCTTTAAAAGGCCAGGCAGTATTTaGACTGTTGGAAGCCATACAGACTCTGCTATACTACTAAACTCA +
Preference number: 2 (lower is better)
Translates to: SIKGIDKLFKRPGSI*TVGSHTDSAILLNS
Trigger: TGAGTTTAGTAGTATAGCAGAGTCTGTATGGCTTCCAACAGTCAAAATACTGCCTGGCCTTTTAAAGAGTTTGTCAATCCCTTTTATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAAATTTTCAGTCAACTaGTGCTGCATGAATATTTGC +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLKFSVN*CCMNIC
Trigger: GCAAATATTCATGCAGCAGCAGTTGACTGAAAATTT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGTATTCACAATAAGCTaGAGAAAAACCCATGCAATT +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLVFTIS*RKTHAI
Trigger: AATTGCATGGGTTTTTCTGCAGCTTATTGTGAATAC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAATGAAGATTTAGCATaGTTGTCTTTGCTCCCAAAT +
Preference number: 2 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLNEDLA*LSLLPN
Trigger: ATTTGGGAGCAAAGACAAGCATGCTAAATCTTCATT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTGTCCTTCAGGGTTTaGAATGTTATCAACTTTGCA +
Preference number: 2 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLSFRV*NVINFA
Trigger: TGCAAAGTTGATAACATTTCAAACCCTGAAGGACAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
3UTR-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCTGTCCTTCAGGGTTTaGAATGTTATCAACTTTGCA +
Preference number: 2 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLSFRV*NVINFA
Trigger: TGCAAAGTTGATAACATTTCAAACCCTGAAGGACAG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
3UTR-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTGTTTCACCAGAATATaGACGGGTTTAAGAAAGCAT +
Preference number: 2 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNCFTRI*TGLRKH
Trigger: ATGCTTTCTTAAACCCGTGCATATTCTGGTGAAACA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
3UTR GCA 72 bp GCCTCTGGATATCCCAGGCTTGCAGTGGGGCTGTTGTaGAGCCCTCCACAACTCCCATCCTGCCCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: ASGYPRLAVGLL*SPPQLPSCPRK
Trigger: TTTCCTGGGGCAGGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGATATCCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR GCA 72 bp GTGGGGCTGTTGTGCAGCCCTCCACAACTCCCATCCTaGCCCAGGAAATGTGTGCCCAATTCATCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: VGLLCSPPQLPS*PRKCVPNSSLG
Trigger: GCCCAGAGATGAATTGGGCACACATTTCCTGGGGCAGGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR CCA 72 bp CTGAGGAAGATGCCTCTGGATATCCCAGGCTTGCAGTaGGGCTGTTGTGCAGCCCTCCACAACTCCCATCCT +
Preference number: 3 (lower is better)
Translates to: LRKMPLDIPGLQ*GCCAALHNSHP
Trigger: AGGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGATATCCAGAGGCATCTTCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR-3UTR CAA 90 bp GGATATCCCAGGCTTGCAGTGGGGCTGTTGTGCAGCCCTCCACAACTCCCATCCATCTCTGGGCTCACCTaGTATCTTAATCCCAAATCA +
Preference number: 3 (lower is better)
Translates to: GYPRLAVGLLCSPPQLPSISGLT*YLNPKS
Trigger: TGATTTGGGATTAAGATACAAGGTGAGCCCAGAGAT...GGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGATATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR GCA 72 bp CTTGCTCTGTCGCGCAATGGCATGATCTCGGCTCACTaGAACCTCCGCCTAAAAGGTTCAAGCAATTCTCAT +
Preference number: 3 (lower is better)
Translates to: LALSRNGMISAH*NLRLKGSSNSH
Trigger: ATGAGAATTGCTTGAACCTTTTAGGCGGAGGTTGCAGTGAGCCGAGATCATGCCATTGCGCGACAGAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGACTGTCCTTCAGGGTTaGAAATGTTATCAACTTTGC +
Preference number: 3 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGTVLQG*KCYQLC
Trigger: GCAAAGTTGATAACATTTCAAACCCTGAAGGACAGT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR CCA 72 bp CGGTTTCGTGGAGACAATTTCCACAGACACAGGTGTTaGGGTAGATGGTTTCAGGATGAGACTGTTCCACCT +
Preference number: 3 (lower is better)
Translates to: RFRGDNFHRHRC*GRWFQDETVPP
Trigger: AGGTGGAACAGTCTCATCCTGAAACCATCTACCCCAACACCTGTGTCTGTGGAAATTGTCTCCACGAAACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGAAGATTTAGCATGCTaGTCTTTGCTCCCAAATATT +
Preference number: 3 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGEDLAC*SLLPNI
Trigger: AATATTTGGGAGCAAAGACAAGCATGCTAAATCTTC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CAA 90 bp CAGCCCTCCACAACTCCCATCCTGCCCCAGGAAATGTGTGCCCAATTCATCTCTAACAGAGAGGTTGACTaGTTGAATCTGTCTTTTCTG +
Preference number: 3 (lower is better)
Translates to: QPSTTPILPQEMCAQFISNREVD*LNLSFL
Trigger: CAGAAAAGACAGATTCAACAAGTCAACCTCTCTGTT...AGAGATGAATTGGGCACACATTTCCTGGGGCAGGATGGGAGTTGTGGAGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR CCA 72 bp GGAGACAATTTCCACAGACACAGGTGTTGGGGTAGATaGTTTCAGGATGAGACTGTTCCACCTCAGATCATC +
Preference number: 3 (lower is better)
Translates to: GDNFHRHRCWGR*FQDETVPPQII
Trigger: GATGATCTGAGGTGGAACAGTCTCATCCTGAAACCATCTACCCCAACACCTGTGTCTGTGGAAATTGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATCTGAGGTCAGAAGTTaGAGACCAGCCTGGCTGACA +
Preference number: 3 (lower is better)
Translates to: GAQCRSTESESTCSYAHQSEVRS*RPAWLT
Trigger: TGTCAGCCAGGCTGGTCTCAAACTTCTGACCTCAGA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CAA 90 bp TGCCTGAACAGAGAGGTTGACTTGTTGAATCTGTCTTTTCTGTCTGACGTCTGTCTTCCTGCCATCTGCTaGTGCTTGTTGGTCCAACGA +
Preference number: 3 (lower is better)
Translates to: CLNREVDLLNLSFLSDVCLPAIC*CLLVQR
Trigger: TCGTTGGACCAACAAGCACAAGCAGATGGCAGGAAG...ACAGACGTCAGACAGAAAAGACAGATTCAACAAGTCAACCTCTCTGTTCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACCCCAATTTTGTTTCTaGCCTCACCACTTACTCTTC +
Preference number: 3 (lower is better)
Translates to: GAQCRSTESESTCSYAHQPQFCF*PHHLLF
Trigger: GAAGAGTAAGTGGTGAGGCAAGAAACAAAATTGGGG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CAA 90 bp TGCCCCAGGAAATGTGTGCCCAATTCATCTCTGGGCTCACCTTGTATCTTAATCACTTCGTTGGTGGTATaGGGGAGAAAATATAGTATC +
Preference number: 3 (lower is better)
Translates to: CPRKCVPNSSLGSPCILITSLVV*GRKYSI
Trigger: GATACTATATTTTCTCCCCAATACCACCAACGAAGT...GATTAAGATACAAGGTGAGCCCAGAGATGAATTGGGCACACATTTCCTGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR GCA 72 bp TTGTTGCATTTGCAGATACAGTATCCTACAAATATGTaGAGCAAGCCCATGAAGCACTTCCACCGTCGATAC +
Preference number: 3 (lower is better)
Translates to: LLHLQIQYPTNM*SKPMKHFHRRY
Trigger: GTATCGACGGTGGAAGTGCTTCATGGGCTTGCTGCACATATTTGTAGGATACTGTATCTGCAAATGCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR GCA 72 bp CCTGGGACTGTGTTTAAAAAGACTCACGGGGCCCAATaGAGATCTACTGAATCAGAATCCACTTGTTCATAT +
Preference number: 3 (lower is better)
Translates to: PGTVFKKTHGAQ*RSTESESTCSY
Trigger: ATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCCGTGAGTCTTTTTAAACACAGTCCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR GCA 72 bp AGGCAGTATTTTGACTGTTGGAAGCCATACAGACTCTaGTATACTACTAAACTCAGCCACTGTACCAGGAAA +
Preference number: 3 (lower is better)
Translates to: RQYFDCWKPYRL*YTTKLSHCTRK
Trigger: TTTCCTGGTACAGTGGCTGAGTTTAGTAGTATAGCAGAGTCTGTATGGCTTCCAACAGTCAAAATACTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CAA 90 bp CCAAATCACAGCATGAAAGACTCATCTGTTACTTCGTTGGTGGTATTGGGGAGAACTGTCCTTCAGGGTTaGAAATGTTATCAACTTTGC +
Preference number: 3 (lower is better)
Translates to: PNHSMKDSSVTSLVVLGRTVLQG*KCYQLC
Trigger: GCAAAGTTGATAACATTTCAAACCCTGAAGGACAGT...TCTCCCCAATACCACCAACGAAGTAACAGATGAGTCTTTCATGCTGTGATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR TCA 72 bp AGATACAGTATCCTACAAATATGTGCAGCAAGCCCATaGAGCACTTCCACCGTCGATACTGATATTTCAGTA +
Preference number: 3 (lower is better)
Translates to: RYSILQICAASP*STSTVDTDISV
Trigger: TACTGAAATATCAGTATCGACGGTGGAAGTGCTTCATGGGCTTGCTGCACATATTTGTAGGATACTGTATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCACTGTCCTTCAGGGTTaGAAATGTTATCAACTTTGC +
Preference number: 3 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLTVLQG*KCYQLC
Trigger: GCAAAGTTGATAACATTTCAAACCCTGAAGGACAGT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR-3UTR CAA 90 bp TGCCTGAACAGAGAGGTTGACTTGTTGAATCTGTCTTTTCTGTCTGACGTCTGTTGTGTCATACAGGTGTaGTATAAAGAAAACGTTGGA +
Preference number: 3 (lower is better)
Translates to: CLNREVDLLNLSFLSDVCCVIQV*YKENVG
Trigger: TCCAACGTTTTCTTTATACAACACCTGTATGACACA...ACAGACGTCAGACAGAAAAGACAGATTCAACAAGTCAACCTCTCTGTTCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCTTATTCATACCTGTTaGCTAAAAACTCATGTGCAC +
Preference number: 3 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLLIHTC*LKTHVH
Trigger: GTGCACATGAGTTTTTAGCAAACAGGTATGAATAAG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR CCA 72 bp AATGTTCTAATCTTCCTGCCATCTGCTTGTGCTTGTTaGTCCAACGATACTAGGGAAGTCCTTTGTATATAT +
Preference number: 3 (lower is better)
Translates to: NVLIFLPSACAC*SNDTREVLCIY
Trigger: ATATATACAAAGGACTTCCCTAGTATCGTTGGACCAACAAGCACAAGCAGATGGCAGGAAGATTAGAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACTGTCCTTCAGGGTTaGAAATGTTATCAACTTTGC +
Preference number: 3 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTVLQG*KCYQLC
Trigger: GCAAAGTTGATAACATTTCAAACCCTGAAGGACAGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
3UTR-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGTTCTGTTACTAGTTTaGCTTTCACATCTCAGTAAG +
Preference number: 3 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNVLLLV*LSHLSK
Trigger: CTTACTGAGATGTGAAAGCAAAACTAGTAACAGAAC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
3UTR TCA 72 bp CTCCTCCAAACCAAAAGTAGTAAGAAGGTAAGGGTATaGACAGCAAAGTTGTGTAACATTTTCTTATTTCTA +
Preference number: 3 (lower is better)
Translates to: LLQTKSSKKVRV*TAKLCNIFLFL
Trigger: TAGAAATAAGAAAATGTTACACAACTTTGCTGTTCATACCCTTACCTTCTTACTACTTTTGGTTTGGAGGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR CCA 72 bp TTTAACGGCTACTTGCAAAGAGCAATATGTAAAGCCTaGCACATAATATACTTATTAACTGGACATCAGAAA +
Preference number: 3 (lower is better)
Translates to: FNGYLQRAICKA*HIIYLLTGHQK
Trigger: TTTCTGATGTCCAGTTAATAAGTATATTATGTGCCAGGCTTTACATATTGCTCTTTGCAAGTAGCCGTTAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCGCCACATTCGGGCCTaGGCCCGCTCCCGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGRHIRA*ARSRHH
Trigger: GTGGTGGCGGGAGCGGGCCCAGGCCCGAATGTGGCG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243326.9
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGGAGGGTGGGCAGACTaGGGGTTCCCCGCGGCCTAC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGGGWAD*GFPAAY
Trigger: GTAGGCCGCGGGGAACCCTCAGTCTGCCCACCCTCC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000243326.9
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTCATGTCGGCCACCCTaGGGCCCGAACCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGSCRPP*GPNRKR
Trigger: CCTCTTCCGGTTCGGGCCTCAGGGTGGCCGACATGA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243326.9
3UTR CAA 72 bp GGGGTGCTGAGGAAGATGCCTCTGGATATCCCAGGCTaGCAGTGGGGCTGTTGTGCAGCCCTCCACAACTCC +
Preference number: 4 (lower is better)
Translates to: GVLRKMPLDIPG*QWGCCAALHNS
Trigger: GGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGATATCCAGAGGCATCTTCCTCAGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACGCGGCGGCCCAGTGTaGGTCCGGCCCTCACACCCG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQRGGPV*VRPSHP
Trigger: CGGGTGTGAGGGCCGGACTCACACTGGGCCGCCGCG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243326.9
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTCAGTCTGCCCTCCATaGGAGGCAGAAGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGSVCPP*EAEGSS
Trigger: GGAAGACCCTTCTGCCTCCCATGGAGGGCAGACTGA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGGCGCGAGGGGGCTCTaGCCCCTGGCCGTCATGTCG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQGARGL*PLAVMS
Trigger: CGACATGACGGCCAGGGGTCAGAGCCCCCTCGCGCC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTGTGCAGCAAGCCCATaGAGCACTTCCACCGTCGAT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGCAASP*STSTVD
Trigger: ATCGACGGTGGAAGTGCTTCATGGGCTTGCTGCACA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCATGGGTTGCAGCAATaGGGAAACAGTCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGHGLQQ*GNSLLP
Trigger: GGGGAGGAGACTGTTTCCTCATTGCTGCAACCCATG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp GGATATCCCAGGCTTGCAGTGGGGCTGTTGTGCAGCCCTCCACAACTCCCATCCGCCAGTTTCAGCCATTaGCTCGCCGATCATCATTTC +
Preference number: 4 (lower is better)
Translates to: GYPRLAVGLLCSPPQLPSASFSH*LADHHF
Trigger: GAAATGATGATCGGCGAGGCAATGGCTGAAACTGGC...GGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGATATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp TTAAATGTAAGGCACAGCCCACAGGCACCTAGGGGTGCTGAGGAAGATGCCTCTATCCCAGGCTTGCAGTaGGGCTGTTGTGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LNVRHSPQAPRGAEEDASIPGLQ*GCCAAL
Trigger: GAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGAT...AGAGGCATCTTCCTCAGCACCCCTAGGTGCCTGTGGGCTGTGCCTTACATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR GCA 90 bp ATCCCAGGCTTGCAGTGGGGCTGTTGTGCAGCCCTCCACAACTCCCATCCTGCCTTGGTATATTGGATCTaGAAAGGAGACACGGCGAAC +
Preference number: 4 (lower is better)
Translates to: IPGLQWGCCAALHNSHPALVYWI*KGDTAN
Trigger: GTTCGCCGTGTCTCCTTTGCAGATCCAATATACCAA...GGCAGGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCCGACTTGTAGGGTATaGGGGAGTTCCAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGPTCRV*GSSSNS
Trigger: ACTGTTGCTGGAACTCCCCCATACCCTACAAGTCGG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGACCAGCTCTCCGGCTTaGTCTCTTAGTTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGTSSPA*SLSSIH
Trigger: GTGAATGGAACTAAGAGATCAAGCCGGAGAGCTGGT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGCCTGGCTGACATGGTaGAACCCCGTATCTACTAAA +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGAWLTW*NPVSTK
Trigger: TTTAGTAGATACGGGGTTTCACCATGTCAGCCAGGC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCTGAGATTACAAGTATaGGCCAACATGCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGLRLQV*ANMPGW
Trigger: CCAGCCAGGCATGTTGGCGCATACTTGTAATCTCAG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CAGCCCTCCACAACTCCCATCCTGCCCCAGGAAATGTGTGCCCAATTCATCTCTGCCCCAGGAAATGTGTaGCCAATTCATCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QPSTTPILPQEMCAQFISAPGNV*PIHLWA
Trigger: AGCCCAGAGATGAATTGGGCACACATTTCCTGGGGC...AGAGATGAATTGGGCACACATTTCCTGGGGCAGGATGGGAGTTGTGGAGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp ATCCCAGGCTTGCAGTGGGGCTGTTGTGCAGCCCTCCACAACTCCCATCCTGCCCACACAGTTCACCAATaGTGGGTAAACACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: IPGLQWGCCAALHNSHPAHTVHQ*WVNTFC
Trigger: ACAGAAAGTGTTTACCCACCATTGGTGAACTGTGTG...GGCAGGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGAACCACTAAAGGTATaGCCAGTTTTGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGEPLKV*PVLPTS
Trigger: TGAGGTGGGCAAAACTGGTCATACCTTTAGTGGTTC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCGAATTGCCCTGAGGTaGGGCATTAGAATCAATGCT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGRIALR*GIRINA
Trigger: AGCATTGATTCTAATGCCTCACCTCAGGGCAATTCG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCAGCCACGCCGCGTCTaGACCCCAGGCCTCCGAATC +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLQPRRV*TPGLRI
Trigger: GATTCGGAGGCCTGGGGTGCAGACGCGGCGTGGCTG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243326.9
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCCGACACCAGACACCTaGGCCCACGCCACATTCGGG +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLPTPDT*AHATFG
Trigger: CCCGAATGTGGCGTGGGCTCAGGTGTCTGGTGTCGG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243326.9
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACGCGGCGGCCCAGTGTaGGTCCGGCCCTCACACCCG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTRGGPV*VRPSHP
Trigger: CGGGTGTGAGGGCCGGACTCACACTGGGCCGCCGCG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGTCATCTGCCAATCCTaGTTGGTATATTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGVICQS*LVYWIC
Trigger: GCAGATCCAATATACCAAGCAGGATTGGCAGATGAC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGAATGGATGGGATTGTaGCCATTCCACCTAAATTCG +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGEWMGL*PFHLNS
Trigger: CGAATTTAGGTGGAATGGCCACAATCCCATCCATTC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGTCCCAAAAGTTGAATaGATGGGATTGTGGCCATTC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGVPKVE*MGLWPF
Trigger: GAATGGCCACAATCCCATCCATTCAACTTTTGGGAC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTCACTTTGGCAAAAGTaGCATTCCAGAACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGSLWQK*HSRTEH
Trigger: GTGCTCAGTTCTGGAATGCCACTTTTGCCAAAGTGA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp ATCCCAGGCTTGCAGTGGGGCTGTTGTGCAGCCCTCCACAACTCCCATCCTGCCGAGATTTCATCTTCTTaGGATCTTTTTAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: IPGLQWGCCAALHNSHPAEISSS*DLFSPL
Trigger: GAGAGGACTAAAAAGATCCCAAGAAGATGAAATCTC...GGCAGGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp GGATATCCCAGGCTTGCAGTGGGGCTGTTGTGCAGCCCTCCACAACTCCCATCCGAACTATTGGAAGAATaGGACCTAACAATAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GYPRLAVGLLCSPPQLPSELLEE*DLTIEH
Trigger: GTGCTCTATTGTTAGGTCCCATTCTTCCAATAGTTC...GGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGATATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGACAAAAATTAACCAGTaGTGGTGGCAGGCACCTGTA +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGTKINQ*WWQAPV
Trigger: TACAGGTGCCTGCCACCACCACTGGTTAATTTTTGT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGGCGCGAGGGGGCTCTaGCCCCTGGCCGTCATGTCG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTGARGL*PLAVMS
Trigger: CGACATGACGGCCAGGGGTCAGAGCCCCCTCGCGCC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGGCGCGAGGGGGCTCTaGCCCCTGGCCGTCATGTCG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNGARGL*PLAVMS
Trigger: CGACATGACGGCCAGGGGTCAGAGCCCCCTCGCGCC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGAGGACCAGCGTTTTTaGTACAGGAAATACTTCAGA +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGEDQRF*YRKYFR
Trigger: TCTGAAGTATTTCCTGTATCAAAAACGCTGGTCCTC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTTGACTAACATGCCATaGATGAGCAAAACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGLTNMP*MSKTFL
Trigger: GAGGAAGGTTTTGCTCATGCATGGCATGTTAGTCAA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTTGCTGTCCAAGGACCCCACGTTGAGAATCACTATTTCAACAGAATTCTTCCTGCAGTGGGGCTGTTGTaGAGCCCTCCACAACTCCCA +
Preference number: 4 (lower is better)
Translates to: LAVQGPHVENHYFNRILPAVGLL*SPPQLP
Trigger: TGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGC...AGGAAGAATTCTGTTGAAATAGTGATTCTCAACGTGGGGTCCTTGGACAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR GCA 90 bp TGCCCCAGGAAATGTGTGCCCAATTCATCTCTGGGCTCACCTTGTATCTTAATCTGGATATCCCAGGCTTaGAGTGGGGCTGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: CPRKCVPNSSLGSPCILIWISQA*SGAVVQ
Trigger: CTGCACAACAGCCCCACTGCAAGCCTGGGATATCCA...GATTAAGATACAAGGTGAGCCCAGAGATGAATTGGGCACACATTTCCTGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACGCCACATTCGGGCCTaGGCCCGCTCCCGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTRHIRA*ARSRHH
Trigger: GTGGTGGCGGGAGCGGGCCCAGGCCCGAATGTGGCG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAAATCCAGTGACCGATaGAAACAGCCCCGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQKSSDR*KQPRGG
Trigger: GCCGCCGCGGGGCTGTTTCCATCGGTCACTGGATTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243326.9
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTGTTCCATCAGAATATaGTCCACTGGATTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGCSIRI*STGFLH
Trigger: ATGGAGGAATCCAGTGGACCATATTCTGATGGAACA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTCATTAGGTGACTCCTaGCTTTCAAGAGACATTGCT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGSLGDS*LSRDIA
Trigger: AGCAATGTCTCTTGAAAGCCAGGAGTCACCTAATGA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGACAGTTCACCAATGGTaGGTAAACACTTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGTVHQW*VNTFCW
Trigger: CCAACAGAAAGTGTTTACCCACCATTGGTGAACTGT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCACACAGTTCACCAATaGTGGGTAAACACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGHTVHQ*WVNTFC
Trigger: ACAGAAAGTGTTTACCCACCATTGGTGAACTGTGTG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGAACACAGCCTACAAGTaGTTCCAAACTGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGNTAYK*FQTEKE
Trigger: TTCTTTCTCAGTTTGGAATCACTTGTAGGCTGTGTT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTTAAAACTGAGTCACTaGAAGCTAGTGGTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGLKLSH*KLVVKL
Trigger: CAACTTCACCACTAGCTTTCAGTGACTCAGTTTTAA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCAGAAATCCTTTGGCTaGAGTGGTATTATGCTTAGA +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGQKSFG*SGIMLR
Trigger: TCTAAGCATAATACCACTTCAGCCAAAGGATTTCTG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CAGCCCTCCACAACTCCCATCCTGCCCCAGGAAATGTGTGCCCAATTCATCTCTTTCACCTGCTGCTCATaGTATATTCTGAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: QPSTTPILPQEMCAQFISFTCCS*YILRAF
Trigger: AAAGGCTCTCAGAATATATCATGAGCAGCAGGTGAA...AGAGATGAATTGGGCACACATTTCCTGGGGCAGGATGGGAGTTGTGGAGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCTGTCCTTCAGGGTTTaGAATGTTATCAACTTTGCA +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGLSFRV*NVINFA
Trigger: TGCAAAGTTGATAACATTTCAAACCCTGAAGGACAG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCTGCTCCGTAATAGATaGTATTTCTTGCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGLLRNR*YFLLFL
Trigger: CAGAAACAGCAAGAAATAGCATCTATTACGGAGCAG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGAGAACCTTCTTCTTTTaGCTCCGAACTATCAGATTC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGRTFFF*LRTIRF
Trigger: GAATCTGATAGTTCGGAGGCAAAAGAAGAAGGTTCT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCAGTTTAGCTGTGTCTaGTTCAGAGTCATCATTTCT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGQFSCV*FRVIIS
Trigger: AGAAATGATGACTCTGAAGCAGACACAGCTAAACTG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGATCAAGACCACATTCTaGCAGCTAGAAGCAAATAAC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGIKTTF*QLEANN
Trigger: GTTATTTGCTTCTAGCTGGCAGAATGTGGTCTTGAT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp TTAAATGTAAGGCACAGCCCACAGGCACCTAGGGGTGCTGAGGAAGATGCCTCTAATCTTCCTGCCATCTaGTTGTGCTTGTTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LNVRHSPQAPRGAEEDASNLPAI*LCLLVQ
Trigger: TTGGACCAACAAGCACAAGCAGATGGCAGGAAGATT...AGAGGCATCTTCCTCAGCACCCCTAGGTGCCTGTGGGCTGTGCCTTACATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGGGGGCTCTGACCCCTaGCCGTCATGTCGGCCACCC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTGGSDP*PSCRPP
Trigger: GGGTGGCCGACATGACGGCCAGGGGTCAGAGCCCCC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000243326.9
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGAACTGGACATTATCTTaGAAGAAAGTTCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGNWTLS*KKVPHS
Trigger: GCTGTGAGGAACTTTCTTCCAAGATAATGTCCAGTT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCAGAATATGGTCCACTaGATTCCTCCATCATTTCAA +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGQNMVH*IPPSFQ
Trigger: TTGAAATGATGGAGGAATCCAGTGGACCATATTCTG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGGGGGCTCTGACCCCTaGCCGTCATGTCGGCCACCG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTGGSDP*PSCRPP
Trigger: CGGTGGCCGACATGACGGCCAGGGGTCAGAGCCCCC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428287.6
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGAAAGAACCTTTCATCTaGTACACCACATTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGKEPFI*YTTFQE
Trigger: TTCTTGGAATGTGGTGTATCAGATGAAAGGTTCTTT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGATAGCCATAGCAAAATaGAGATTTAGCATGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGIAIAK*RFSMLV
Trigger: GACAAGCATGCTAAATCTTCATTTTGCTATGGCTAT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCTAGGCCTTTCTTACTaGATTAAAGTCAAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGLGLSY*IKVKVG
Trigger: TCCAACTTTGACTTTAATTCAGTAAGAAAGGCCTAG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGATGAAGAATATGAGATaGAACCTAGGCCTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGMKNMR*NLGLSY
Trigger: GTAAGAAAGGCCTAGGTTTCATCTCATATTCTTCAT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTCAGCACCCAGACGCTaGCAGAGCTCGACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLSAPRR*QSSTFP
Trigger: TGGGAAAGTCGAGCTCTGGCAGCGTCTGGGTGCTGA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACAGCCACGCCGCGTCTaGACCCCAGGCCTCCGAATC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTQPRRV*TPGLRI
Trigger: GATTCGGAGGCCTGGGGTGCAGACGCGGCGTGGCTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTTTCTAAGACTACAATaGCTTCAACAGATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGFLRLQ*LQQIPQ
Trigger: CTGAGGAATCTGTTGAAGGCATTGTAGTCTTAGAAA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTCTATCAATGTCATCTaGCAATCCTGCTTGGTATAT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGSINVI*QSCLVY
Trigger: ATATACCAAGCAGGATTGGCAGATGACATTGATAGA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTGTTTCACCAGAATATaGACGGGTTTAAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGCFTRI*TGLRKH
Trigger: ATGCTTTCTTAAACCCGTGCATATTCTGGTGAAACA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGAAACTTTCTATGACTTaGTGTAGAATGTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGKLSMT*CRMCAL
Trigger: CAAGGCACACATTCTACAGCAAGTCATAGAAAGTTT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCAGTCTTTTTGTAAGTaGTATCAGTCAGGTCTATCT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGQSFCK*YQSGLS
Trigger: AGATAGACCTGACTGATAGCACTTACAAAAAGACTG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATGTCGGCCACCGCGTaGGGCGCGCTCCCTCCTAGA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTMSATA*GALPPR
Trigger: TCTAGGAGGGAGCGCGCCGCACGCGGTGGCCGACAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428287.6
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTCAGTCTGCCCTCCATaGGAGGCAGAAGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLSVCPP*EAEGSS
Trigger: GGAAGACCCTTCTGCCTCCCATGGAGGGCAGACTGA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGACTCAGTTCCATTTTTaGGGTTTCTTCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGTQFHF*GFFWFF
Trigger: GAAAAACCAGAAGAAACCCCAAAAATGGAACTGAGT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCAGAAATACCAGTTTTaGTTCTCTCTTGTCCATGAA +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGQKYQF*FSLVHE
Trigger: TTCATGGACAAGAGAGAACCAAAACTGGTATTTCTG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGTAAACACTTTCTGTTaGGCATGGTATGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGVNTFC*AWYGFF
Trigger: AAAGAATCCATACCATGCCCAACAGAAAGTGTTTAC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACCTCCTAGACCAAGATaGCGGCTGGGCGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTPPRPR*RLGGPR
Trigger: CCTGGGCCCGCCCAGCCGCCATCTTGGTCTAGGAGG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428287.6
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCCTCCTAGACCAAGATaGCGGCTGGGCGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNPPRPR*RLGGPR
Trigger: CCTGGGCCCGCCCAGCCGCCATCTTGGTCTAGGAGG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACCGACACCAGACACCTaGGCCCACGCCACATTCGGG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTPTPDT*AHATFG
Trigger: CCCGAATGTGGCGTGGGCTCAGGTGTCTGGTGTCGG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCATGTCGGCCACCCTaGGGCCCGAACCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSCRPP*GPNRKR
Trigger: CCTCTTCCGGTTCGGGCCTCAGGGTGGCCGACATGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAACCGTGTTCGGCCTCTaGCTAGTTTCTCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQTVFGL*LVSQRT
Trigger: AGTCCTCTGAGAAACTAGTCAGAGGCCGAACACGGT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp TGCAGCCCTCCACAACTCCCATCCTGCCCCAGGAAATGTGTGCCCAATTCATCTAGTTCCCTTAGTTTTTaGGGAGATGCATTATTGTCT +
Preference number: 4 (lower is better)
Translates to: CSPPQLPSCPRKCVPNSSSSLSF*GDALLS
Trigger: AGACAATAATGCATCTCCTCAAAAACTAAGGGAACT...AGATGAATTGGGCACACATTTCCTGGGGCAGGATGGGAGTTGTGGAGGGCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp TTAAATGTAAGGCACAGCCCACAGGCACCTAGGGGTGCTGAGGAAGATGCCTCTCAGAAATCCTTTGGCTaGAGTGGTATTATGCTTAGA +
Preference number: 4 (lower is better)
Translates to: LNVRHSPQAPRGAEEDASQKSFG*SGIMLR
Trigger: TCTAAGCATAATACCACTTCAGCCAAAGGATTTCTG...AGAGGCATCTTCCTCAGCACCCCTAGGTGCCTGTGGGCTGTGCCTTACATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGAGCTTTGTATTGTCATaGTCCATTGTAGATTCAGAA +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGSFVLS*SIVDSE
Trigger: TTCTGAATCTACAATGGAGCATGACAATACAAAGCT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTTGCTGTCCAAGGACCCCACGTTGAGAATCACTATTTCAACAGAATTCTTCCTCAGACACAGCGTGTCTaGATGCCACTAGGACTGTCA +
Preference number: 4 (lower is better)
Translates to: LAVQGPHVENHYFNRILPQTQRV*MPLGLS
Trigger: TGACAGTCCTAGTGGCATGCAGACACGCTGTGTCTG...AGGAAGAATTCTGTTGAAATAGTGATTCTCAACGTGGGGTCCTTGGACAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCAACTTAGTTTCTCGTaGATTTCAAATAGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGQLSFS*ISNSWL
Trigger: AAGCCAACTATTTGAAATGCACGAGAAACTAAGTTG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGAATGAAGATTTAGCATaGTTGTCTTTGCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGNEDLA*LSLLPN
Trigger: ATTTGGGAGCAAAGACAAGCATGCTAAATCTTCATT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGATCCACTTGTTCATATaGACATCAAAGTTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGIHLFI*TSKFES
Trigger: ACTCTCAAACTTTGATGTGCATATGAACAAGTGGAT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGTGCCAGAAGGTTTTTaGATAATGGAATTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGVPEGF*IMEFLK
Trigger: CTTTAGAAATTCCATTATCCAAAAACCTTCTGGCAC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTGCTCTGTCGCGCAATaGCATGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLCSVAQ*HDLGSL
Trigger: CAGTGAGCCGAGATCATGCCATTGCGCGACAGAGCA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCACCGTGTTCGGCCTCTaGCTAGTTTCTCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLTVFGL*LVSQRT
Trigger: AGTCCTCTGAGAAACTAGTCAGAGGCCGAACACGGT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGATGCTCTTCTAGTTTaGTACCGTGTTCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQDALLV*YRVRPL
Trigger: CAGAGGCCGAACACGGTATCAAACTAGAAGAGCATC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAGATGCCAGACACTGTaGTGGTTCCTCCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQRCQTL*WFLHFL
Trigger: CAGAAAGTGGAGGAACCATCACAGTGTCTGGCATCT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACACTCCTGGGCCAAAGTaGTCCACCTGCCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNTPGPK*STCRAF
Trigger: GAAGGCCCGGCAGGTGGATCACTTTGGCCCAGGAGT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACTCCTGGGCCAAAGTaGTCCACCTGCCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTPGPK*STCRAF
Trigger: GAAGGCCCGGCAGGTGGATCACTTTGGCCCAGGAGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGGCCAGGCAGTATTTTaGCTGTTGGAAGCCATACAG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQGQAVF*LLEAIQ
Trigger: CTGTATGGCTTCCAACAGTCAAAATACTGCCTGGCC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCAGACACAGCGTGTCTaGATGCCACTAGGACTGTCA +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLQTQRV*MPLGLS
Trigger: TGACAGTCCTAGTGGCATGCAGACACGCTGTGTCTG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp TGCCCCAGGAAATGTGTGCCCAATTCATCTCTGGGCTCACCTTGTATCTTAATCGTCATCTGCCAATCCTaGTTGGTATATTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: CPRKCVPNSSLGSPCILIVICQS*LVYWIC
Trigger: GCAGATCCAATATACCAAGCAGGATTGGCAGATGAC...GATTAAGATACAAGGTGAGCCCAGAGATGAATTGGGCACACATTTCCTGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp TTCCAATCCCCATCACTTGCTGTCCAAGGACCCCACGTTGAGAATCACTATTTCCTGTTGGGCATGGTATaGATTCTTTGGCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: FQSPSLAVQGPHVENHYFLLGMV*ILWPFL
Trigger: CAGAAATGGCCAAAGAATCCATACCATGCCCAACAG...GAAATAGTGATTCTCAACGTGGGGTCCTTGGACAGCAAGTGATGGGGATTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAATTAACCAGTGGTGGTaGCAGGCACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQINQWW*QAPVIP
Trigger: TGGGATTACAGGTGCCTGCCACCACCACTGGTTAAT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGTCCAAGGACCCCACGTTGAGAATCACTATTTCAACAGAATTCTTCCTCTTCCATGGCGAAAACCCCTaGGAACATCGTCTAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LSKDPTLRITISTEFFLFHGENP*EHRLVS
Trigger: AGACACTAGACGATGTTCCCAGGGGTTTTCGCCATG...GAAGAGGAAGAATTCTGTTGAAATAGTGATTCTCAACGTGGGGTCCTTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp TTAAATGTAAGGCACAGCCCACAGGCACCTAGGGGTGCTGAGGAAGATGCCTCTCTTCGTTGGTGGTATTaGGGAGAAAATATAGTATCT +
Preference number: 4 (lower is better)
Translates to: LNVRHSPQAPRGAEEDASLRWWY*GENIVS
Trigger: AGATACTATATTTTCTCCCCAATACCACCAACGAAG...AGAGGCATCTTCCTCAGCACCCCTAGGTGCCTGTGGGCTGTGCCTTACATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACAGAATGTGCTTCCTTaGAGCTCAGTGTGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQQNVLP*SSVCGK
Trigger: CTTTCCACACACTGAGCTTCAAGGAAGCACATTCTG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp TTCCAATCCCCATCACTTGCTGTCCAAGGACCCCACGTTGAGAATCACTATTTCGTTCTCTCTTGTCCATaGAAGCTAGCTTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: FQSPSLAVQGPHVENHYFVLSCP*KLASFP
Trigger: AGGAAATGAAGCTAGCTTTCATGGACAAGAGAGAAC...GAAATAGTGATTCTCAACGTGGGGTCCTTGGACAGCAAGTGATGGGGATTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAGATGCCAGACACTGTaGTGGTTCCTCCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLRCQTL*WFLHFL
Trigger: CAGAAAGTGGAGGAACCATCACAGTGTCTGGCATCT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp ATCTCTGGGCTCACCTTGTATCTTAATCCCAAATCACAGCATGAAAGACTCATCAGATGCCAGACACTGTaGTGGTTCCTCCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: ISGLTLYLNPKSQHERLIRCQTL*WFLHFL
Trigger: CAGAAAGTGGAGGAACCATCACAGTGTCTGGCATCT...GATGAGTCTTTCATGCTGTGATTTGGGATTAAGATACAAGGTGAGCCCAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACATGTCTCAGCCTCCTaGGTAGCTGAGATTACAAGT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQHVSAS*VAEITS
Trigger: ACTTGTAATCTCAGCTACTCAGGAGGCTGAGACATG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGCCAGTTTCAGCCATTaGCTCGCCGATCATCATTTC +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLASFSH*LADHHF
Trigger: GAAATGATGATCGGCGAGGCAATGGCTGAAACTGGC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCTGTTTACTCACGCGTaGGGCGCGCTCCCTCCTAGA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLFTHA*GALPPR
Trigger: TCTAGGAGGGAGCGCGCCGCACGCGTGAGTAAACAG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAAATCCAGTGACCGATaGAAACAGCCCCGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTKSSDR*KQPRGG
Trigger: GCCGCCGCGGGGCTGTTTCCATCGGTCACTGGATTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCTCCAGTCATACGACTaGTCAGAGTCAGGTAAGCGT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLLQSYD*SESGKR
Trigger: ACGCTTACCTGACTCTGACCAGTCGTATGACTGGAG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATCTGTTTCACCATCATaGCCAGTTTCAGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQSVSPS*PVSAIA
Trigger: GGCAATGGCTGAAACTGGCCATGATGGTGAAACAGA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp AATGTTCTAATCTTCCTGCCATCTGCTTGTGCTTGTTGGTCCAACGATACTAGGTCTGTTTCACCATCATaGCCAGTTTCAGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: NVLIFLPSACACWSNDTRSVSPS*PVSAIA
Trigger: GGCAATGGCTGAAACTGGCCATGATGGTGAAACAGA...CCTAGTATCGTTGGACCAACAAGCACAAGCAGATGGCAGGAAGATTAGAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR CAA 72 bp TCCAATCCCCATCACTTGCTGTCCAAGGACCCCACGTaGAGAATCACTATTTCAACAGAATTCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SNPHHLLSKDPT*RITISTEFFLF
Trigger: GAAGAGGAAGAATTCTGTTGAAATAGTGATTCTCAACGTGGGGTCCTTGGACAGCAAGTGATGGGGATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGCCTCTTCTCCCATTTaGATTGGGGCTTGTTCAATT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQASSPI*IGACSI
Trigger: AATTGAACAAGCCCCAATTCAAATGGGAGAAGAGGC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGGACCCAACAAGAAATaGAGCAACATTTCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQGPNKK*SNISSP
Trigger: GGGACTTGAAATGTTGCTTCATTTCTTGTTGGGTCC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAAAAGGAAGGGCTGCTaGTTAACGGATGTTCCAATG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQKRKGC*LTDVPM
Trigger: CATTGGAACATCCGTTAATCAGCAGCCCTTCCTTTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGTGGCATTCCAGAACTaGGCACTCTGTTTTCGAATC +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLVAFQN*ALCFRI
Trigger: GATTCGAAAACAGAGTGCTCAGTTCTGGAATGCCAC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGACACACATTCTGTTTaGTTAAGCAAACCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQDTHSV*LSKPGG
Trigger: CCCACCTGGTTTGCTTAATCAAACAGAATGTGTGTC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCATGTCTCAGCCTCCTaGGTAGCTGAGATTACAAGT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLHVSAS*VAEITS
Trigger: ACTTGTAATCTCAGCTACTCAGGAGGCTGAGACATG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACTAACATGCCATGCATaGGCAAAACCTTCCTCCATA +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQLTCHA*AKPSSI
Trigger: TATGGAGGAAGGTTTTGCTCATGCATGGCATGTTAG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTCAGCACCCAGACGCTaGCAGAGCTCGACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSAPRR*QSSTFP
Trigger: TGGGAAAGTCGAGCTCTGGCAGCGTCTGGGTGCTGA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAAACTCCCACTTCGATaGAAGGTCCTTCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQKLPLR*KVLPSS
Trigger: ACTACTTGGAAGGACCTTGCATCGAAGTGGGAGTTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGAGGGTATCAGAATGTaGTTCCTTGAAGCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQEGIRM*FLEAQC
Trigger: ACACTGAGCTTCAAGGAAGCACATTCTGATACCCTC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp TTCCAATCCCCATCACTTGCTGTCCAAGGACCCCACGTTGAGAATCACTATTTCCAGTTTAGCTGTGTCTaGTTCAGAGTCATCATTTCT +
Preference number: 4 (lower is better)
Translates to: FQSPSLAVQGPHVENHYFQFSCV*FRVIIS
Trigger: AGAAATGATGACTCTGAAGCAGACACAGCTAAACTG...GAAATAGTGATTCTCAACGTGGGGTCCTTGGACAGCAAGTGATGGGGATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATGTGTTAAAGTAATCTaGTCCCCTCTGCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQCVKVI*SPLPQT
Trigger: TGTTTGGGGCAGAGGGGAGCAGATTACTTTAACACA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTGGGAGGCAGAGCTTaGAGTGAACCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLGGRA*SEPRSH
Trigger: GTGCGATCTCGGTTCACTGCAAGCTCTGCCTCCCAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCAGTCTGCCCTCCATaGGAGGCAGAAGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSVCPP*EAEGSS
Trigger: GGAAGACCCTTCTGCCTCCCATGGAGGGCAGACTGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGAATGGATGGGATTGTaGCCATTCCACCTAAATTCG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQEWMGL*PFHLNS
Trigger: CGAATTTAGGTGGAATGGCCACAATCCCATCCATTC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTTATCTACAATGTCCTaGGTACCATCCCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLLSTMS*VPSPSD
Trigger: GTCTGAGGGGGATGGTACCCAGGACATTGTAGATAA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAAATTAGCAGGAAGATaGGGTCCAAGTCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQKLAGR*GPSLIS
Trigger: ACTGATGAGACTTGGACCTCATCTTCCTGCTAATTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAATAATGCCGGTGATTaGGTTGCCAATAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQNNAGD*VANSEE
Trigger: CTCTTCACTATTGGCAACTCAATCACCGGCATTATT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATACCATTTGATCTGCTaGTATTACTACTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQYHLIC*YYYWGC
Trigger: ACACCCCCAGTAGTAATATCAGCAGATCAAATGGTA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTTGCTGTCCAAGGACCCCACGTTGAGAATCACTATTTCAACAGAATTCTTCCTCTCCAAAGATTCCTGTaGAACATTTTTCGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LAVQGPHVENHYFNRILPLQRFL*NIFRVS
Trigger: GGAGACTCGAAAAATGTTTCACAGGAATCTTTGGAG...AGGAAGAATTCTGTTGAAATAGTGATTCTCAACGTGGGGTCCTTGGACAGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGTTCTCTCTTGTCCATaGAAGCTAGCTTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQVLSCP*KLASFP
Trigger: AGGAAATGAAGCTAGCTTTCATGGACAAGAGAGAAC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAGGTGGAGGTTGCAGTaGGCTGAGATCGTACCACTG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNRWRLQ*AEIVPL
Trigger: CAGTGGTACGATCTCAGCTCACTGCAACCTCCACCT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACATGGGTTGCAGCAATaGGGAAACAGTCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTHGLQQ*GNSLLP
Trigger: GGGGAGGAGACTGTTTCCTCATTGCTGCAACCCATG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAAACTCCCACTTCGATaGAAGGTCCTTCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLKLPLR*KVLPSS
Trigger: ACTACTTGGAAGGACCTTGCATCGAAGTGGGAGTTT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAAGCAAACCCTGAGATaGTCTTCTAGTTTGATACCG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQKQTLR*SSSLIP
Trigger: CGGTATCAAACTAGAAGAGCATCTCAGGGTTTGCTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTTGGTATATTGGATCTaGAAAGGAGACACGGCGAAC +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLLVYWI*KGDTAN
Trigger: GTTCGCCGTGTCTCCTTTGCAGATCCAATATACCAA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAATGATGTCAACTGGTaGCACACAGTTCACCAATGG +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLNDVNW*HTVHQW
Trigger: CCATTGGTGAACTGTGTGGCACCAGTTGACATCATT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATTGACTAACATGCCATaGATGAGCAAAACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQLTNMP*MSKTFL
Trigger: GAGGAAGGTTTTGCTCATGCATGGCATGTTAGTCAA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp TTAATCCCAAATCACAGCATGAAAGACTCATCTGTTACTTCGTTGGTGGTATTGCCTGCCATCTGCTTGTaGTTGTTGGTCCAACGATAC +
Preference number: 4 (lower is better)
Translates to: LIPNHSMKDSSVTSLVVLPAICL*LLVQRY
Trigger: GTATCGTTGGACCAACAAGCACAAGCAGATGGCAGG...CAATACCACCAACGAAGTAACAGATGAGTCTTTCATGCTGTGATTTGGGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCAAAAGTTGAATGGATaGGATTGTGGCCATTCCACC +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLQKLNG*DCGHST
Trigger: GGTGGAATGGCCACAATCCCATCCATTCAACTTTTG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGCAAAGTCTTCATGGTaGCCACTGGAAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLAKSSW*PLEISV
Trigger: AACAGAGATTTCCAGTGGCCACCATGAAGACTTTGC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATCTGCCAATCCTGCTTaGTATATTGGATCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQSANPA*YIGSAK
Trigger: CTTTGCAGATCCAATATACCAAGCAGGATTGGCAGA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp TGCCTGAACAGAGAGGTTGACTTGTTGAATCTGTCTTTTCTGTCTGACGTCTGTGGGACAGAAATCCTTTaGCTGAAGTGGTATTATGCT +
Preference number: 4 (lower is better)
Translates to: CLNREVDLLNLSFLSDVCGTEIL*LKWYYA
Trigger: AGCATAATACCACTTCAGCCAAAGGATTTCTGTCCC...ACAGACGTCAGACAGAAAAGACAGATTCAACAAGTCAACCTCTCTGTTCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCTGTTGGGCATGGTATaGATTCTTTGGCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLLLGMV*ILWPFL
Trigger: CAGAAATGGCCAAAGAATCCATACCATGCCCAACAG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGCTGAGGCAGGAGAATaGTGTAAACCTGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNAEAGE*CKPGRQ
Trigger: CTGCCTCCCAGGTTTACACCATTCTCCTGCCTCAGC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATGCTCTGTCGCGCAATaGCATGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTCSVAQ*HDLGSL
Trigger: CAGTGAGCCGAGATCATGCCATTGCGCGACAGAGCA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCACCTTTTGTGCTGAATaGACCACTAAAGGTATGACC +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLTFCAE*TTKGMT
Trigger: GGTCATACCTTTAGTGGTTCATTCAGCACAAAAGGT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACCGTGTTCGGCCTCTaGCTAGTTTCTCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTVFGL*LVSQRT
Trigger: AGTCCTCTGAGAAACTAGTCAGAGGCCGAACACGGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp TGCCTGAACAGAGAGGTTGACTTGTTGAATCTGTCTTTTCTGTCTGACGTCTGTGAATATGGATTAGCTTaGGAAGTTTCTGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: CLNREVDLLNLSFLSDVCEYGLA*EVSDGL
Trigger: AAGCCCATCAGAAACTTCTCAAGCTAATCCATATTC...ACAGACGTCAGACAGAAAAGACAGATTCAACAAGTCAACCTCTCTGTTCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTTCACCTGCTGCTCATaGTATATTCTGAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLFTCCS*YILRAF
Trigger: AAAGGCTCTCAGAATATATCATGAGCAGCAGGTGAA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GTTTTATATAAAGAGGATGTCTCACCAGGAACGGCTATCGGAAAGACACATTTCTCTTCTGAATCCAGCTaGAGAGCAAGAGCACTAATC +
Preference number: 4 (lower is better)
Translates to: VLYKEDVSPGTAIGKTHFSSESS*RARALI
Trigger: GATTAGTGCTCTTGCTCTTCAGCTGGATTCAGAAGA...GAAATGTGTCTTTCCGATAGCCGTTCCTGGTGAGACATCCTCTTTATATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp CTTGCTGTCCAAGGACCCCACGTTGAGAATCACTATTTCAACAGAATTCTTCCTCTGTCCTTCAGGGTTTaGAATGTTATCAACTTTGCA +
Preference number: 4 (lower is better)
Translates to: LAVQGPHVENHYFNRILPLSFRV*NVINFA
Trigger: TGCAAAGTTGATAACATTTCAAACCCTGAAGGACAG...AGGAAGAATTCTGTTGAAATAGTGATTCTCAACGTGGGGTCCTTGGACAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAAGAAGGTAAGGGTATaGACAGCAAAGTTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQKKVRV*TAKLCN
Trigger: GTTACACAACTTTGCTGTTCATACCCTTACCTTCTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAGTTATAAAAGGACTTaGATCTGCCTGGCTTACCAA +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQSYKRT*ICLAYQ
Trigger: TTGGTAAGCCAGGCAGATTCAAGTCCTTTTATAACT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp ATCTCTGGGCTCACCTTGTATCTTAATCCCAAATCACAGCATGAAAGACTCATCCCTGAACAGAGAGGTTaGCTTGTTGAATCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: ISGLTLYLNPKSQHERLIPEQRG*LVESVF
Trigger: AAAGACAGATTCAACAAGTCAACCTCTCTGTTCAGG...GATGAGTCTTTCATGCTGTGATTTGGGATTAAGATACAAGGTGAGCCCAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATCAGAGGGAAATGTCTaGTTAGATATCACCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQSEGNV*LDITQS
Trigger: ACTTTGGGTGATATCTAAGCAGACATTTCCCTCTGA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAATTCTGAGTTTTCAATaGTGGAAAGCAAACCCTGAG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQILSFQ*WKANPE
Trigger: CTCAGGGTTTGCTTTCCAGCATTGAAAACTCAGAAT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACAGACACAGCGTGTCTaGATGCCACTAGGACTGTCA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTQTQRV*MPLGLS
Trigger: TGACAGTCCTAGTGGCATGCAGACACGCTGTGTCTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCAGACACAGCGTGTCTaGATGCCACTAGGACTGTCA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNQTQRV*MPLGLS
Trigger: TGACAGTCCTAGTGGCATGCAGACACGCTGTGTCTG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATTTGGTCACATTTTCTaGTATTACTGTTCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQFGHIF*YYCSAS
Trigger: GGAAGCCGAACAGTAATAGCAGAAAATGTGACCAAA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAAAACTCAAGGCTTCTaGACCCAACAAGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQKTQGF*TQQEMK
Trigger: CTTCATTTCTTGTTGGGTCCAGAAGCCTTGAGTTTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGCTCATTCTTCTTTTTaGACCAATCTGAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQAHSSF*TNLKVS
Trigger: AGAGACCTTCAGATTGGTCCAAAAAGAAGAATGAGC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACCAGATTATTATACATaGCAGGAATATCACACCGCT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQPDYYT*QEYHTA
Trigger: AGCGGTGTGATATTCCTGCCATGTATAATAATCTGG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACCGACTTGTAGGGTATaGGGGAGTTCCAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTPTCRV*GSSSNS
Trigger: ACTGTTGCTGGAACTCCCCCATACCCTACAAGTCGG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCCGACTTGTAGGGTATaGGGGAGTTCCAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNPTCRV*GSSSNS
Trigger: ACTGTTGCTGGAACTCCCCCATACCCTACAAGTCGG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ATATCCAATGTTCTAATCTTCCTGCCATCTGCTTGTGCTTGTTGGTCCAACGATTCATTAGGTGACTCCTaGCTTTCAAGAGACATTGCT +
Preference number: 4 (lower is better)
Translates to: ISNVLIFLPSACACWSNDSLGDS*LSRDIA
Trigger: AGCAATGTCTCTTGAAAGCCAGGAGTCACCTAATGA...ATCGTTGGACCAACAAGCACAAGCAGATGGCAGGAAGATTAGAACATTGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTCTGCCAATCCTGCTTaGTATATTGGATCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLSANPA*YIGSAK
Trigger: CTTTGCAGATCCAATATACCAAGCAGGATTGGCAGA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCACTTTCTGTTGGGCATaGTATGGATTCTTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLTFCWA*YGFFGH
Trigger: ATGGCCAAAGAATCCATACCATGCCCAACAGAAAGT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCACACAGTTCACCAATaGTGGGTAAACACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLHTVHQ*WVNTFC
Trigger: ACAGAAAGTGTTTACCCACCATTGGTGAACTGTGTG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCAGTATTTTGACTGTTaGAAGCCATACAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLQYFDC*KPYRLC
Trigger: GCAGAGTCTGTATGGCTTCCAACAGTCAAAATACTG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGGTCCCTTAACATCATaGCAAATACGTAACTGTAGT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQGPLTS*QIRNCS
Trigger: ACTACAGTTACGTATTTGCCATGATGTTAAGGGACC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCATGCTTATTGTACTTTaGATCAGAGGCACACAAACC +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLMLIVL*IRGTQT
Trigger: GGTTTGTGTGCCTCTGATTCAAAGTACAATAAGCAT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTCCATATTAGCAACCTaGTATGCTGGTGAACCTAAT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLSILAT*YAGEPN
Trigger: ATTAGGTTCACCAGCATATCAGGTTGCTAATATGGA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAAAGAACCTTTCATCTaGTACACCACATTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQKEPFI*YTTFQE
Trigger: TTCTTGGAATGTGGTGTATCAGATGAAAGGTTCTTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACCAGCTCTCCGGCTTaGTCTCTTAGTTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTSSPA*SLSSIH
Trigger: GTGAATGGAACTAAGAGATCAAGCCGGAGAGCTGGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGATGCTCTTCTAGTTTaGTACCGTGTTCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTDALLV*YRVRPL
Trigger: CAGAGGCCGAACACGGTATCAAACTAGAAGAGCATC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGATGCTCTTCTAGTTTaGTACCGTGTTCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNDALLV*YRVRPL
Trigger: CAGAGGCCGAACACGGTATCAAACTAGAAGAGCATC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAACTTGCAACAAATCTaGAGTTACTGTAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQNLQQI*SYCRIL
Trigger: CAGGATTCTACAGTAACTTCAGATTTGTTGCAAGTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp AATGTTCTAATCTTCCTGCCATCTGCTTGTGCTTGTTGGTCCAACGATACTAGGTATTCTTTAACCCAATaGGTGACTTTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: NVLIFLPSACACWSNDTRYSLTQ*VTFPEV
Trigger: AACCTCAGGAAAAGTCACTCATTGGGTTAAAGAATA...CCTAGTATCGTTGGACCAACAAGCACAAGCAGATGGCAGGAAGATTAGAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAGATGCCAGACACTGTaGTGGTTCCTCCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTRCQTL*WFLHFL
Trigger: CAGAAAGTGGAGGAACCATCACAGTGTCTGGCATCT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAGATGCCAGACACTGTaGTGGTTCCTCCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNRCQTL*WFLHFL
Trigger: CAGAAAGTGGAGGAACCATCACAGTGTCTGGCATCT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAGTTCCCTTAGTTTTTaGGGAGATGCATTATTGTCT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQSSLSF*GDALLS
Trigger: AGACAATAATGCATCTCCTCAAAAACTAAGGGAACT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGGATTAAACTTTCTATaGCTTGCTGTAGAATGTGTG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQGLNFL*LAVECV
Trigger: CACACATTCTACAGCAAGTCATAGAAAGTTTAATCC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGCCTGGCTGACATGGTaGAACCCCGTATCTACTAAA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTAWLTW*NPVSTK
Trigger: TTTAGTAGATACGGGGTTTCACCATGTCAGCCAGGC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAGGCAGGTGGATATCTaGGGTCAGAAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNRQVDI*GQKFET
Trigger: GGTCTCAAACTTCTGACCTCAGATATCCACCTGCCT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAGGCAGGTGGATATCTaGGGTCAGAAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTRQVDI*GQKFET
Trigger: GGTCTCAAACTTCTGACCTCAGATATCCACCTGCCT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACCATTTTAGGAGGCTaGGGCAGGTGGATATCTGAG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTILGG*GRWISE
Trigger: CTCAGATATCCACCTGCCTCAGCCTCCTAAAATGGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACACCATTTTAGGAGGCTaGGGCAGGTGGATATCTGAG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNTILGG*GRWISE
Trigger: CTCAGATATCCACCTGCCTCAGCCTCCTAAAATGGT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAGCCTCCTGAGTAGCTaGGATTACAAGTATGCGCCA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSLLSS*DYKYAP
Trigger: TGGCGCATACTTGTAATCTCAGCTACTCAGGAGGCT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAGCCTCCTGAGTAGCTaGGATTACAAGTATGCGCCA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSLLSS*DYKYAP
Trigger: TGGCGCATACTTGTAATCTCAGCTACTCAGGAGGCT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAATGAAGAATATGAGATaGAACCTAGGCCTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQMKNMR*NLGLSY
Trigger: GTAAGAAAGGCCTAGGTTTCATCTCATATTCTTCAT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAGTTATAAAAGGACTTaGATCTGCCTGGCTTACCAA +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLSYKRT*ICLAYQ
Trigger: TTGGTAAGCCAGGCAGATTCAAGTCCTTTTATAACT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAGGTATGACCAGTTTTaGCCACCTCACTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNRYDQF*PPHCLF
Trigger: GAAGAGGCAGTGAGGTGGGCAAAACTGGTCATACCT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAGGTATGACCAGTTTTaGCCACCTCACTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTRYDQF*PPHCLF
Trigger: GAAGAGGCAGTGAGGTGGGCAAAACTGGTCATACCT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACATCTCCAGAGCAGTTaGTCCCCGCAAATGTACCTT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTHLQSS*SPQMYL
Trigger: AAGGTACATTTGCGGGGAGCAACTGCTCTGGAGATG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCATCTCCAGAGCAGTTaGTCCCCGCAAATGTACCTT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNHLQSS*SPQMYL
Trigger: AAGGTACATTTGCGGGGAGCAACTGCTCTGGAGATG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGCACAAGTTCTCTTCTaGTGTTGCCACCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTAQVLF*CCHQSS
Trigger: GCTGCTTTGGTGGCAACAGCAGAAGAGAACTTGTGC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGAAGGCAAAGAAATATaGCCAAGTACACTGGAAATA +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQEGKEI*PSTLEI
Trigger: TATTTCCAGTGTACTTGGGCATATTTCTTTGCCTTC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAAAGTAATAAAGGTTTaGCTCCGACTTGTAGGGTAT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQKVIKV*LRLVGY
Trigger: ATACCCTACAAGTCGGAGGCAAACCTTTATTACTTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCAGTTTAGCTGTGTCTaGTTCAGAGTCATCATTTCT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLQFSCV*FRVIIS
Trigger: AGAAATGATGACTCTGAAGCAGACACAGCTAAACTG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGCCAGTTTCAGCCATTaGCTCGCCGATCATCATTTC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTASFSH*LADHHF
Trigger: GAAATGATGATCGGCGAGGCAATGGCTGAAACTGGC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp AATGTTCTAATCTTCCTGCCATCTGCTTGTGCTTGTTGGTCCAACGATACTAGGTCTATCAATGTCATCTaGCAATCCTGCTTGGTATAT +
Preference number: 4 (lower is better)
Translates to: NVLIFLPSACACWSNDTRSINVI*QSCLVY
Trigger: ATATACCAAGCAGGATTGGCAGATGACATTGATAGA...CCTAGTATCGTTGGACCAACAAGCACAAGCAGATGGCAGGAAGATTAGAACATT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR GCA 90 bp TATCTTAATCCCAAATCACAGCATGAAAGACTCATCTGTTACTTCGTTGGTGGTAATGATGTCAACTGGTaGCACACAGTTCACCAATGG +
Preference number: 4 (lower is better)
Translates to: YLNPKSQHERLICYFVGGNDVNW*HTVHQW
Trigger: CCATTGGTGAACTGTGTGGCACCAGTTGACATCATT...ACCACCAACGAAGTAACAGATGAGTCTTTCATGCTGTGATTTGGGATTAAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATGTTTCACCAGAATATaGACGGGTTTAAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQCFTRI*TGLRKH
Trigger: ATGCTTTCTTAAACCCGTGCATATTCTGGTGAAACA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACAGTTCACAGGCATCTaGATGAATCACCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTQFTGI*MNHLGL
Trigger: CAGTCCCAGGTGATTCATGCAGATGCCTGTGAACTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCTCATCACTTCTCAGTaGATCAACTTCTATCAGCAT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLLITSQ*INFYQH
Trigger: ATGCTGATAGAAGTTGATGCACTGAGAAGTGATGAG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTCCAGTCATACGACTaGTCAGAGTCAGGTAAGCGT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLQSYD*SESGKR
Trigger: ACGCTTACCTGACTCTGACCAGTCGTATGACTGGAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCTCCAGTCATACGACTaGTCAGAGTCAGGTAAGCGT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLQSYD*SESGKR
Trigger: ACGCTTACCTGACTCTGACCAGTCGTATGACTGGAG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAAAACTCAAGGCTTCTaGACCCAACAAGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLKTQGF*TQQEMK
Trigger: CTTCATTTCTTGTTGGGTCCAGAAGCCTTGAGTTTT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAACTGGACATTATCTTaGAAGAAAGTTCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLNWTLS*KKVPHS
Trigger: GCTGTGAGGAACTTTCTTCCAAGATAATGTCCAGTT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACTATTTTCCTTATCTTaGCTTTCAGTGGTAGACTCT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQLFSLS*LSVVDS
Trigger: AGAGTCTACCACTGAAAGCCAAGATAAGGAAAATAG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAACTCAGTTCCATTTTTaGGGTTTCTTCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQTQFHF*GFFWFF
Trigger: GAAAAACCAGAAGAAACCCCAAAAATGGAACTGAGT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGAGATTTCATCTTCTTaGGATCTTTTTAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQEISSS*DLFSPL
Trigger: GAGAGGACTAAAAAGATCCCAAGAAGATGAAATCTC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATTAACCAGTGGTGGTaGCAGGCACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTINQWW*QAPVIP
Trigger: TGGGATTACAGGTGCCTGCCACCACCACTGGTTAAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCATGCGCCAACATGCCTaGCTGGTTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLMRQHA*LVFVFL
Trigger: TAAAAATACAAAAACCAGCCAGGCATGTTGGCGCAT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTGCTTGTGCTTGTTGGTCCAACGATACTAGGGAAGTCCTTTGTATATATCTCCCTGTTACTTCGTTGGTaGTATTGGGGAGAAAATATA +
Preference number: 4 (lower is better)
Translates to: LLVLVGPTILGKSFVYISLLLRW*YWGENI
Trigger: TATATTTTCTCCCCAATACCACCAACGAAGTAACAG...GGAGATATATACAAAGGACTTCCCTAGTATCGTTGGACCAACAAGCACAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp ATCTCTGGGCTCACCTTGTATCTTAATCCCAAATCACAGCATGAAAGACTCATCCATCTGTTACTTCGTTaGTGGTATTGGGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: ISGLTLYLNPKSQHERLIHLLLR*WYWGEN
Trigger: ATTTTCTCCCCAATACCACCAACGAAGTAACAGATG...GATGAGTCTTTCATGCTGTGATTTGGGATTAAGATACAAGGTGAGCCCAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGAACCACTAAAGGTATaGCCAGTTTTGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTEPLKV*PVLPTS
Trigger: TGAGGTGGGCAAAACTGGTCATACCTTTAGTGGTTC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGAACCACTAAAGGTATaGCCAGTTTTGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNEPLKV*PVLPTS
Trigger: TGAGGTGGGCAAAACTGGTCATACCTTTAGTGGTTC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCGAATTGCCCTGAGGTaGGGCATTAGAATCAATGCT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNRIALR*GIRINA
Trigger: AGCATTGATTCTAATGCCTCACCTCAGGGCAATTCG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACGAATTGCCCTGAGGTaGGGCATTAGAATCAATGCT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTRIALR*GIRINA
Trigger: AGCATTGATTCTAATGCCTCACCTCAGGGCAATTCG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTCAAGTCCCAAAAGTTaGATGGATGGGATTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSSPKS*MDGIVA
Trigger: GGCCACAATCCCATCCATTCAACTTTTGGGACTTGA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCAAGTCCCAAAAGTTaGATGGATGGGATTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSSPKS*MDGIVA
Trigger: GGCCACAATCCCATCCATTCAACTTTTGGGACTTGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACAGAATGTGCTTCCTTaGAGCTCAGTGTGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTQNVLP*SSVCGK
Trigger: CTTTCCACACACTGAGCTTCAAGGAAGCACATTCTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCAGAATGTGCTTCCTTaGAGCTCAGTGTGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNQNVLP*SSVCGK
Trigger: CTTTCCACACACTGAGCTTCAAGGAAGCACATTCTG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGTGGCATTCCAGAACTaGGCACTCTGTTTTCGAATC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNVAFQN*ALCFRI
Trigger: GATTCGAAAACAGAGTGCTCAGTTCTGGAATGCCAC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGTGGCATTCCAGAACTaGGCACTCTGTTTTCGAATC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTVAFQN*ALCFRI
Trigger: GATTCGAAAACAGAGTGCTCAGTTCTGGAATGCCAC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAAACTGAACTACTGCTaGCAACGAAAGAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLKLNYC*QRKNFL
Trigger: CAGAAAATTCTTTCGTTGTCAGCAGTAGTTCAGTTT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAACTTGCAACAAATCTaGAGTTACTGTAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLNLQQI*SYCRIL
Trigger: CAGGATTCTACAGTAACTTCAGATTTGTTGCAAGTT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTATTCTTTAACCCAATaGGTGACTTTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLYSLTQ*VTFPEV
Trigger: AACCTCAGGAAAAGTCACTCATTGGGTTAAAGAATA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGCATATCTGCTAGACTaGCTTATTCATTATAGCACT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLAYLLD*LIHYST
Trigger: AGTGCTATAATGAATAAGTCAGTCTAGCAGATATGC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTTATTTGCAGGTAACTaGGGAATGAACAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLLFAGN*GMNKYF
Trigger: GAAGTACTTGTTCATTCCTCAGTTACCTGCAAATAA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp GTTTTATATAAAGAGGATGTCTCACCAGGAACGGCTATCGGAAAGACACATTTCCCACGTTTCCAAGAATaGCACTTAAAAACTGGCAAT +
Preference number: 4 (lower is better)
Translates to: VLYKEDVSPGTAIGKTHFPRFQE*HLKTGN
Trigger: ATTGCCAGTTTTTAAGTGTCATTCTTGGAAACGTGG...GAAATGTGTCTTTCCGATAGCCGTTCCTGGTGAGACATCCTCTTTATATAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATTAGTAGTCATAAGCTaGTCCGTAATAGATGCTATT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQLVVIS*SVIDAI
Trigger: AATAGCATCTATTACGGAGCAGCTTATGACTACTAA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGAAGGCAAAGAAATATaGCCAAGTACACTGGAAATA +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLEGKEI*PSTLEI
Trigger: TATTTCCAGTGTACTTGGGCATATTTCTTTGCCTTC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAAAGTCCCTTCTCTTTaGTTTGCTTTTGGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQKVPSL*FAFGRK
Trigger: TTTTCTACCAAAAGCAAAGCAAAGAGAAGGGACTTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAATTAAATTCCTCAGTTaGTACTTCTTTGGCATTCAG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQIKFLS*YFFGIQ
Trigger: CTGAATGCCAAAGAAGTAGCAACTGAGGAATTTAAT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAAAGTTGTCCATTTCTaGAGTCAACATGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQKVVHF*SQHVCF
Trigger: GAAACAAACATGTTGACTGCAGAAATGGACAACTTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AATGTTCTAATCTTCCTGCCATCTGCTTGTGCTTGTTGGTCCAACGATACTAGGAAAGTTGTCCATTTCTaGAGTCAACATGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: NVLIFLPSACACWSNDTRKVVHF*SQHVCF
Trigger: GAAACAAACATGTTGACTGCAGAAATGGACAACTTT...CCTAGTATCGTTGGACCAACAAGCACAAGCAGATGGCAGGAAGATTAGAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTCTATCAATGTCATCTaGCAATCCTGCTTGGTATAT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLSINVI*QSCLVY
Trigger: ATATACCAAGCAGGATTGGCAGATGACATTGATAGA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTGCTTGTGCTTGTTGGTCCAACGATACTAGGGAAGTCCTTTGTATATATCTCCCAACTTAGTTTCTCGTaGATTTCAAATAGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLVLVGPTILGKSFVYISQLSFS*ISNSWL
Trigger: AAGCCAACTATTTGAAATGCACGAGAAACTAAGTTG...GGAGATATATACAAAGGACTTCCCTAGTATCGTTGGACCAACAAGCACAAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAAACTTTCTATGACTTaGTGTAGAATGTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLKLSMT*CRMCAL
Trigger: CAAGGCACACATTCTACAGCAAGTCATAGAAAGTTT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAATCCACTTGTTCATATaGACATCAAAGTTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQIHLFI*TSKFES
Trigger: ACTCTCAAACTTTGATGTGCATATGAACAAGTGGAT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAACTTTAACGGCTACTTaGAAAGAGCAATATGTAAAG +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQTLTAT*KEQYVK
Trigger: CTTTACATATTGCTCTTTGCAAGTAGCCGTTAAAGT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAATTCCAGCTCAATCTaGCTTTTCCATTCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLNSSSI*LFHSLQ
Trigger: TTGAAGAGAATGGAAAAGGCAGATTGAGCTGGAATT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCAGTCTTTTTGTAAGTaGTATCAGTCAGGTCTATCT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLQSFCK*YQSGLS
Trigger: AGATAGACCTGACTGATAGCACTTACAAAAAGACTG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACTTCATCTTCCAAACTaGACATTATCTTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQLHLPN*TLSWKK
Trigger: TTTCTTCCAAGATAATGTCCAGTTTGGAAGATGAAG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATTATCTACAATGTCCTaGGTACCATCCCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLSTMS*VPSPSD
Trigger: GTCTGAGGGGGATGGTACCCAGGACATTGTAGATAA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTTATCTACAATGTCCTaGGTACCATCCCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLSTMS*VPSPSD
Trigger: GTCTGAGGGGGATGGTACCCAGGACATTGTAGATAA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCTGTTTCACCATCATaGCCAGTTTCAGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSVSPS*PVSAIA
Trigger: GGCAATGGCTGAAACTGGCCATGATGGTGAAACAGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTCTGTTTCACCATCATaGCCAGTTTCAGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSVSPS*PVSAIA
Trigger: GGCAATGGCTGAAACTGGCCATGATGGTGAAACAGA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CCTAAATCTCCCACGTTTCCAAGAATGACACTTAAAAACTGGCAATCAATATCCTCTGCCAATCCTGCTTaGTATATTGGATCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PKSPTFPRMTLKNWQSISSANPA*YIGSAK
Trigger: CTTTGCAGATCCAATATACCAAGCAGGATTGGCAGA...GGATATTGATTGCCAGTTTTTAAGTGTCATTCTTGGAAACGTGGGAGATTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp CCTAAATCTCCCACGTTTCCAAGAATGACACTTAAAAACTGGCAATCAATATCCACTTTCTGTTGGGCATaGTATGGATTCTTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PKSPTFPRMTLKNWQSISTFCWA*YGFFGH
Trigger: ATGGCCAAAGAATCCATACCATGCCCAACAGAAAGT...GGATATTGATTGCCAGTTTTTAAGTGTCATTCTTGGAAACGTGGGAGATTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGTAAACACTTTCTGTTaGGCATGGTATGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLVNTFC*AWYGFF
Trigger: AAAGAATCCATACCATGCCCAACAGAAAGTGTTTAC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CCTAAATCTCCCACGTTTCCAAGAATGACACTTAAAAACTGGCAATCAATATCCACAGTTCACCAATGGTaGGTAAACACTTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PKSPTFPRMTLKNWQSISTVHQW*VNTFCW
Trigger: CCAACAGAAAGTGTTTACCCACCATTGGTGAACTGT...GGATATTGATTGCCAGTTTTTAAGTGTCATTCTTGGAAACGTGGGAGATTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATCAAACTTGTACAAGTaGCAAAGCAGCTTTAACAAT +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQSNLYK*QSSFNN
Trigger: ATTGTTAAAGCTGCTTTGCCACTTGTACAAGTTTGA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAATATCCAGTTTCCATTaGCAAGTGATAACAGTTAAC +
Preference number: 4 (lower is better)
Translates to: GAQCRSTESESTCSYAHQISSFH*QVITVN
Trigger: GTTAACTGTTATCACTTGCCAATGGAAACTGGATAT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGCCTCTTCTCCCATTTaGATTGGGGCTTGTTCAATT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTASSPI*IGACSI
Trigger: AATTGAACAAGCCCCAATTCAAATGGGAGAAGAGGC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGGACCCAACAAGAAATaGAGCAACATTTCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNGPNKK*SNISSP
Trigger: GGGACTTGAAATGTTGCTTCATTTCTTGTTGGGTCC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGGACCCAACAAGAAATaGAGCAACATTTCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTGPNKK*SNISSP
Trigger: GGGACTTGAAATGTTGCTTCATTTCTTGTTGGGTCC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAAAAGGAAGGGCTGCTaGTTAACGGATGTTCCAATG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTKRKGC*LTDVPM
Trigger: CATTGGAACATCCGTTAATCAGCAGCCCTTCCTTTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAAAAGGAAGGGCTGCTaGTTAACGGATGTTCCAATG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNKRKGC*LTDVPM
Trigger: CATTGGAACATCCGTTAATCAGCAGCCCTTCCTTTT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTCTTCCGTGACATCTTaGGGAATGACAATGTCACTG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSSVTS*GMTMSL
Trigger: CAGTGACATTGTCATTCCTCAAGATGTCACGGAAGA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCTTCCGTGACATCTTaGGGAATGACAATGTCACTG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSSVTS*GMTMSL
Trigger: CAGTGACATTGTCATTCCTCAAGATGTCACGGAAGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGACACACATTCTGTTTaGTTAAGCAAACCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTDTHSV*LSKPGG
Trigger: CCCACCTGGTTTGCTTAATCAAACAGAATGTGTGTC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTCTTCTGAATCCAGCTaGAGAGCAAGAGCACTAATC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSSESS*RARALI
Trigger: GATTAGTGCTCTTGCTCTTCAGCTGGATTCAGAAGA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCTTCTGAATCCAGCTaGAGAGCAAGAGCACTAATC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSSESS*RARALI
Trigger: GATTAGTGCTCTTGCTCTTCAGCTGGATTCAGAAGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCCTGGCTAACACAGTaGACCCCTTCTCTACTAAAA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSWLTQ*TPSLLK
Trigger: TTTTAGTAGAGAAGGGGTTCACTGTGTTAGCCAGGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTAACATGCCATGCATaGGCAAAACCTTCCTCCATA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLTCHA*AKPSSI
Trigger: TATGGAGGAAGGTTTTGCTCATGCATGGCATGTTAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAAACTCCCACTTCGATaGAAGGTCCTTCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTKLPLR*KVLPSS
Trigger: ACTACTTGGAAGGACCTTGCATCGAAGTGGGAGTTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGAGGGTATCAGAATGTaGTTCCTTGAAGCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTEGIRM*FLEAQC
Trigger: ACACTGAGCTTCAAGGAAGCACATTCTGATACCCTC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGAGGGTATCAGAATGTaGTTCCTTGAAGCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNEGIRM*FLEAQC
Trigger: ACACTGAGCTTCAAGGAAGCACATTCTGATACCCTC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTTGGTATATTGGATCTaGAAAGGAGACACGGCGAAC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLVYWI*KGDTAN
Trigger: GTTCGCCGTGTCTCCTTTGCAGATCCAATATACCAA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATTGGTATATTGGATCTaGAAAGGAGACACGGCGAAC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLVYWI*KGDTAN
Trigger: GTTCGCCGTGTCTCCTTTGCAGATCCAATATACCAA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGTCATCTGCCAATCCTaGTTGGTATATTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTVICQS*LVYWIC
Trigger: GCAGATCCAATATACCAAGCAGGATTGGCAGATGAC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGTCATCTGCCAATCCTaGTTGGTATATTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNVICQS*LVYWIC
Trigger: GCAGATCCAATATACCAAGCAGGATTGGCAGATGAC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAATGATGTCAACTGGTaGCACACAGTTCACCAATGG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTNDVNW*HTVHQW
Trigger: CCATTGGTGAACTGTGTGGCACCAGTTGACATCATT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAATGATGTCAACTGGTaGCACACAGTTCACCAATGG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNNDVNW*HTVHQW
Trigger: CCATTGGTGAACTGTGTGGCACCAGTTGACATCATT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTGTGTTAAAGTAATCTaGTCCCCTCTGCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNCVKVI*SPLPQT
Trigger: TGTTTGGGGCAGAGGGGAGCAGATTACTTTAACACA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCACTTTAACGGCTACTTaGAAAGAGCAATATGTAAAG +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLTLTAT*KEQYVK
Trigger: CTTTACATATTGCTCTTTGCAAGTAGCCGTTAAAGT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGAATGGATGGGATTGTaGCCATTCCACCTAAATTCG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTEWMGL*PFHLNS
Trigger: CGAATTTAGGTGGAATGGCCACAATCCCATCCATTC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGAATGGATGGGATTGTaGCCATTCCACCTAAATTCG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNEWMGL*PFHLNS
Trigger: CGAATTTAGGTGGAATGGCCACAATCCCATCCATTC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCAAAAGTTGAATGGATaGGATTGTGGCCATTCCACC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNQKLNG*DCGHST
Trigger: GGTGGAATGGCCACAATCCCATCCATTCAACTTTTG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACAAAAGTTGAATGGATaGGATTGTGGCCATTCCACC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTQKLNG*DCGHST
Trigger: GGTGGAATGGCCACAATCCCATCCATTCAACTTTTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGTCCCAAAAGTTGAATaGATGGGATTGTGGCCATTC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTVPKVE*MGLWPF
Trigger: GAATGGCCACAATCCCATCCATTCAACTTTTGGGAC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGCAAAGTCTTCATGGTaGCCACTGGAAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNAKSSW*PLEISV
Trigger: AACAGAGATTTCCAGTGGCCACCATGAAGACTTTGC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGCAAAGTCTTCATGGTaGCCACTGGAAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTAKSSW*PLEISV
Trigger: AACAGAGATTTCCAGTGGCCACCATGAAGACTTTGC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCACTTTGGCAAAAGTaGCATTCCAGAACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSLWQK*HSRTEH
Trigger: GTGCTCAGTTCTGGAATGCCACTTTTGCCAAAGTGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTGTTGGGCATGGTATaGATTCTTTGGCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLLGMV*ILWPFL
Trigger: CAGAAATGGCCAAAGAATCCATACCATGCCCAACAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCTGTTGGGCATGGTATaGATTCTTTGGCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLLGMV*ILWPFL
Trigger: CAGAAATGGCCAAAGAATCCATACCATGCCCAACAG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACAAAAATTAACCAGTaGTGGTGGCAGGCACCTGTA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTKINQ*WWQAPV
Trigger: TACAGGTGCCTGCCACCACCACTGGTTAATTTTTGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTCAAACTTGTACAAGTaGCAAAGCAGCTTTAACAAT +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLSNLYK*QSSFNN
Trigger: ATTGTTAAAGCTGCTTTGCCACTTGTACAAGTTTGA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGTTTTAACTGTTCTTTaGAGAAAGGAAGGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLVLTVL*RKEGLV
Trigger: TACTAAGCCTTCCTTTCTCCAAAGAACAGTTAAAAC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp TCTCCCACGTTTCCAAGAATGACACTTAAAAACTGGCAATCAATATCCAATGTTTTCTCCAGGAACTGCTaGGTTTTCTTTTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SPTFPRMTLKNWQSISNVFSRNC*VFFSSV
Trigger: CACAGAAGAAAAGAAAACCCAGCAGTTCCTGGAGAA...AACATTGGATATTGATTGCCAGTTTTTAAGTGTCATTCTTGGAAACGTGGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACCTTTTGTGCTGAATaGACCACTAAAGGTATGACC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTFCAE*TTKGMT
Trigger: GGTCATACCTTTAGTGGTTCATTCAGCACAAAAGGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACACCTTTTGTGCTGAATaGACCACTAAAGGTATGACC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNTFCAE*TTKGMT
Trigger: GGTCATACCTTTAGTGGTTCATTCAGCACAAAAGGT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAAATTAGCAGGAAGATaGGGTCCAAGTCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNKLAGR*GPSLIS
Trigger: ACTGATGAGACTTGGACCTCATCTTCCTGCTAATTT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAAATTAGCAGGAAGATaGGGTCCAAGTCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTKLAGR*GPSLIS
Trigger: ACTGATGAGACTTGGACCTCATCTTCCTGCTAATTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGAGGACCAGCGTTTTTaGTACAGGAAATACTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTEDQRF*YRKYFR
Trigger: TCTGAAGTATTTCCTGTATCAAAAACGCTGGTCCTC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGAGGACCAGCGTTTTTaGTACAGGAAATACTTCAGA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNEDQRF*YRKYFR
Trigger: TCTGAAGTATTTCCTGTATCAAAAACGCTGGTCCTC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAATAATGCCGGTGATTaGGTTGCCAATAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTNNAGD*VANSEE
Trigger: CTCTTCACTATTGGCAACTCAATCACCGGCATTATT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATACCATTTGATCTGCTaGTATTACTACTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTYHLIC*YYYWGC
Trigger: ACACCCCCAGTAGTAATATCAGCAGATCAAATGGTA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTCCAAAGATTCCTGTaGAACATTTTTCGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLQRFL*NIFRVS
Trigger: GGAGACTCGAAAAATGTTTCACAGGAATCTTTGGAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCTCCAAAGATTCCTGTaGAACATTTTTCGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLQRFL*NIFRVS
Trigger: GGAGACTCGAAAAATGTTTCACAGGAATCTTTGGAG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGTTCTCTCTTGTCCATaGAAGCTAGCTTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTVLSCP*KLASFP
Trigger: AGGAAATGAAGCTAGCTTTCATGGACAAGAGAGAAC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGTTCTCTCTTGTCCATaGAAGCTAGCTTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNVLSCP*KLASFP
Trigger: AGGAAATGAAGCTAGCTTTCATGGACAAGAGAGAAC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATTCACCTGCTGCTCATaGTATATTCTGAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTFTCCS*YILRAF
Trigger: AAAGGCTCTCAGAATATATCATGAGCAGCAGGTGAA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATGTCACTGTCCATTTaGTCCTCCGTAATCATCATC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTMSLSI*SSVIII
Trigger: GATGATGATTACGGAGGAGCAAATGGACAGTGACAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACATGTCACTGTCCATTTaGTCCTCCGTAATCATCATC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNMSLSI*SSVIII
Trigger: GATGATGATTACGGAGGAGCAAATGGACAGTGACAT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAAGCAAACCCTGAGATaGTCTTCTAGTTTGATACCG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTKQTLR*SSSLIP
Trigger: CGGTATCAAACTAGAAGAGCATCTCAGGGTTTGCTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTATCCTACAAATATGTaGAGCAAGCCCATGAAGCAC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNYPTNM*SKPMKH
Trigger: GTGCTTCATGGGCTTGCTGCACATATTTGTAGGATA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATATCCTACAAATATGTaGAGCAAGCCCATGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTYPTNM*SKPMKH
Trigger: GTGCTTCATGGGCTTGCTGCACATATTTGTAGGATA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTGTTCTCACATGGATaGAACTCAAAGGCTGCATTA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLFSHG*NSKAAL
Trigger: TAATGCAGCCTTTGAGTTCCATCCATGTGAGAACAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCTGTTCTCACATGGATaGAACTCAAAGGCTGCATTA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLFSHG*NSKAAL
Trigger: TAATGCAGCCTTTGAGTTCCATCCATGTGAGAACAG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTGTTCCATCAGAATATaGTCCACTGGATTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNCSIRI*STGFLH
Trigger: ATGGAGGAATCCAGTGGACCATATTCTGATGGAACA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATGTTCCATCAGAATATaGTCCACTGGATTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTCSIRI*STGFLH
Trigger: ATGGAGGAATCCAGTGGACCATATTCTGATGGAACA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTGAGTTTTCAATGCTaGAAAGCAAACCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLSFQC*KANPEM
Trigger: CATCTCAGGGTTTGCTTTCCAGCATTGAAAACTCAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCTGAGTTTTCAATGCTaGAAAGCAAACCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLSFQC*KANPEM
Trigger: CATCTCAGGGTTTGCTTTCCAGCATTGAAAACTCAG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCATTAGGTGACTCCTaGCTTTCAAGAGACATTGCT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSLGDS*LSRDIA
Trigger: AGCAATGTCTCTTGAAAGCCAGGAGTCACCTAATGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTCATTAGGTGACTCCTaGCTTTCAAGAGACATTGCT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSLGDS*LSRDIA
Trigger: AGCAATGTCTCTTGAAAGCCAGGAGTCACCTAATGA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCTGCCAATCCTGCTTaGTATATTGGATCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSANPA*YIGSAK
Trigger: CTTTGCAGATCCAATATACCAAGCAGGATTGGCAGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTCTGCCAATCCTGCTTaGTATATTGGATCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSANPA*YIGSAK
Trigger: CTTTGCAGATCCAATATACCAAGCAGGATTGGCAGA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGGGACAGAAATCCTTTaGCTGAAGTGGTATTATGCT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNGTEIL*LKWYYA
Trigger: AGCATAATACCACTTCAGCCAAAGGATTTCTGTCCC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGGGACAGAAATCCTTTaGCTGAAGTGGTATTATGCT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTGTEIL*LKWYYA
Trigger: AGCATAATACCACTTCAGCCAAAGGATTTCTGTCCC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACTTTCTGTTGGGCATaGTATGGATTCTTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTFCWA*YGFFGH
Trigger: ATGGCCAAAGAATCCATACCATGCCCAACAGAAAGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CCTAAATCTCCCACGTTTCCAAGAATGACACTTAAAAACTGGCAATCAATATCCGTAAACACTTTCTGTTaGGCATGGTATGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: PKSPTFPRMTLKNWQSISVNTFC*AWYGFF
Trigger: AAAGAATCCATACCATGCCCAACAGAAAGTGTTTAC...GGATATTGATTGCCAGTTTTTAAGTGTCATTCTTGGAAACGTGGGAGATTTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACAGTTCACCAATGGTaGGTAAACACTTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTVHQW*VNTFCW
Trigger: CCAACAGAAAGTGTTTACCCACCATTGGTGAACTGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACACACAGTTCACCAATaGTGGGTAAACACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTHTVHQ*WVNTFC
Trigger: ACAGAAAGTGTTTACCCACCATTGGTGAACTGTGTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACAGTATTTTGACTGTTaGAAGCCATACAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTQYFDC*KPYRLC
Trigger: GCAGAGTCTGTATGGCTTCCAACAGTCAAAATACTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATGCTTATTGTACTTTaGATCAGAGGCACACAAACC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTMLIVL*IRGTQT
Trigger: GGTTTGTGTGCCTCTGATTCAAAGTACAATAAGCAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCCATATTAGCAACCTaGTATGCTGGTGAACCTAAT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSILAT*YAGEPN
Trigger: ATTAGGTTCACCAGCATATCAGGTTGCTAATATGGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTCCATATTAGCAACCTaGTATGCTGGTGAACCTAAT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSILAT*YAGEPN
Trigger: ATTAGGTTCACCAGCATATCAGGTTGCTAATATGGA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAACACAGCCTACAAGTaGTTCCAAACTGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTNTAYK*FQTEKE
Trigger: TTCTTTCTCAGTTTGGAATCACTTGTAGGCTGTGTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAACACAGCCTACAAGTaGTTCCAAACTGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNNTAYK*FQTEKE
Trigger: TTCTTTCTCAGTTTGGAATCACTTGTAGGCTGTGTT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATTAAAACTGAGTCACTaGAAGCTAGTGGTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLKLSH*KLVVKL
Trigger: CAACTTCACCACTAGCTTTCAGTGACTCAGTTTTAA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGAATATGGATTAGCTTaGGAAGTTTCTGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNEYGLA*EVSDGL
Trigger: AAGCCCATCAGAAACTTCTCAAGCTAATCCATATTC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGAATATGGATTAGCTTaGGAAGTTTCTGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTEYGLA*EVSDGL
Trigger: AAGCCCATCAGAAACTTCTCAAGCTAATCCATATTC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACAGAAATCCTTTGGCTaGAGTGGTATTATGCTTAGA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTQKSFG*SGIMLR
Trigger: TCTAAGCATAATACCACTTCAGCCAAAGGATTTCTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCAGAGGGAAATGTCTaGTTAGATATCACCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSEGNV*LDITQS
Trigger: ACTTTGGGTGATATCTAAGCAGACATTTCCCTCTGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTCAGAGGGAAATGTCTaGTTAGATATCACCCAAAGT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSEGNV*LDITQS
Trigger: ACTTTGGGTGATATCTAAGCAGACATTTCCCTCTGA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCAACAACAGCAGAATaGGTCTCTCCTTTGTTAAAC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSTTAE*VSPLLN
Trigger: GTTTAACAAAGGAGAGACGCATTCTGCTGTTGTTGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTGCTCCGTAATAGATaGTATTTCTTGCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLLRNR*YFLLFL
Trigger: CAGAAACAGCAAGAAATAGCATCTATTACGGAGCAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATTCTGAGTTTTCAATaGTGGAAAGCAAACCCTGAG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTILSFQ*WKANPE
Trigger: CTCAGGGTTTGCTTTCCAGCATTGAAAACTCAGAAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACATTCTGAGTTTTCAATaGTGGAAAGCAAACCCTGAG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNILSFQ*WKANPE
Trigger: CTCAGGGTTTGCTTTCCAGCATTGAAAACTCAGAAT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAGAACCTTCTTCTTTTaGCTCCGAACTATCAGATTC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTRTFFF*LRTIRF
Trigger: GAATCTGATAGTTCGGAGGCAAAAGAAGAAGGTTCT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACAGTTTAGCTGTGTCTaGTTCAGAGTCATCATTTCT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTQFSCV*FRVIIS
Trigger: AGAAATGATGACTCTGAAGCAGACACAGCTAAACTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATTTGGTCACATTTTCTaGTATTACTGTTCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTFGHIF*YYCSAS
Trigger: GGAAGCCGAACAGTAATAGCAGAAAATGTGACCAAA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCCCAATTTTGTTTCTTaGCTCACCACTTACTCTTCA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNPNFVS*LTTYSS
Trigger: TGAAGAGTAAGTGGTGAGGCAAGAAACAAAATTGGG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTCATCACTTCTCAGTaGATCAACTTCTATCAGCAT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLITSQ*INFYQH
Trigger: ATGCTGATAGAAGTTGATGCACTGAGAAGTGATGAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACATCAAGACCACATTCTaGCAGCTAGAAGCAAATAAC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNIKTTF*QLEANN
Trigger: GTTATTTGCTTCTAGCTGGCAGAATGTGGTCTTGAT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAAAACTCAAGGCTTCTaGACCCAACAAGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTKTQGF*TQQEMK
Trigger: CTTCATTTCTTGTTGGGTCCAGAAGCCTTGAGTTTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAAAACTCAAGGCTTCTaGACCCAACAAGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNKTQGF*TQQEMK
Trigger: CTTCATTTCTTGTTGGGTCCAGAAGCCTTGAGTTTT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAACTGGACATTATCTTaGAAGAAAGTTCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTNWTLS*KKVPHS
Trigger: GCTGTGAGGAACTTTCTTCCAAGATAATGTCCAGTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAACTGGACATTATCTTaGAAGAAAGTTCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNNWTLS*KKVPHS
Trigger: GCTGTGAGGAACTTTCTTCCAAGATAATGTCCAGTT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGCTCATTCTTCTTTTTaGACCAATCTGAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNAHSSF*TNLKVS
Trigger: AGAGACCTTCAGATTGGTCCAAAAAGAAGAATGAGC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGCTCATTCTTCTTTTTaGACCAATCTGAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTAHSSF*TNLKVS
Trigger: AGAGACCTTCAGATTGGTCCAAAAAGAAGAATGAGC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACAGAATATGGTCCACTaGATTCCTCCATCATTTCAA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTQNMVH*IPPSFQ
Trigger: TTGAAATGATGGAGGAATCCAGTGGACCATATTCTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCAGAATATGGTCCACTaGATTCCTCCATCATTTCAA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNQNMVH*IPPSFQ
Trigger: TTGAAATGATGGAGGAATCCAGTGGACCATATTCTG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACCAGATTATTATACATaGCAGGAATATCACACCGCT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTPDYYT*QEYHTA
Trigger: AGCGGTGTGATATTCCTGCCATGTATAATAATCTGG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCCAGATTATTATACATaGCAGGAATATCACACCGCT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNPDYYT*QEYHTA
Trigger: AGCGGTGTGATATTCCTGCCATGTATAATAATCTGG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp AGAATTAGCATTGTAGAGTTCATCATTAAAACCAGATCTGTGCCTGAACAGAGAACTCAGTTCCATTTTTaGGGTTTCTTCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: RISIVEFIIKTRSVPEQRTQFHF*GFFWFF
Trigger: GAAAAACCAGAAGAAACCCCAAAAATGGAACTGAGT...TCTCTGTTCAGGCACAGATCTGGTTTTAATGATGAACTCTACAATGCTAATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp AGAATTAGCATTGTAGAGTTCATCATTAAAACCAGATCTGTGCCTGAACAGAGACAGAAATACCAGTTTTaGTTCTCTCTTGTCCATGAA +
Preference number: 4 (lower is better)
Translates to: RISIVEFIIKTRSVPEQRQKYQF*FSLVHE
Trigger: TTCATGGACAAGAGAGAACCAAAACTGGTATTTCTG...TCTCTGTTCAGGCACAGATCTGGTTTTAATGATGAACTCTACAATGCTAATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGAACTATTGGAAGAATaGGACCTAACAATAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTELLEE*DLTIEH
Trigger: GTGCTCTATTGTTAGGTCCCATTCTTCCAATAGTTC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGAACTATTGGAAGAATaGGACCTAACAATAGAGCAC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNELLEE*DLTIEH
Trigger: GTGCTCTATTGTTAGGTCCCATTCTTCCAATAGTTC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp TTAATCCCAAATCACAGCATGAAAGACTCATCTGTTACTTCGTTGGTGGTATTGGTGCCAGAAGGTTTTTaGATAATGGAATTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: LIPNHSMKDSSVTSLVVLVPEGF*IMEFLK
Trigger: CTTTAGAAATTCCATTATCCAAAAACCTTCTGGCAC...CAATACCACCAACGAAGTAACAGATGAGTCTTTCATGCTGTGATTTGGGATTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATGCGCCAACATGCCTaGCTGGTTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTMRQHA*LVFVFL
Trigger: TAAAAATACAAAAACCAGCCAGGCATGTTGGCGCAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGGTCCCTTAACATCATaGCAAATACGTAACTGTAGT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNGPLTS*QIRNCS
Trigger: ACTACAGTTACGTATTTGCCATGATGTTAAGGGACC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTCCTTCCAAGTAGTTTaGCAAACAAAGGCCATAATT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSFQVV*QTKAII
Trigger: AATTATGGCCTTTGTTTGTCAAACTACTTGGAAGGA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCCTTCCAAGTAGTTTaGCAAACAAAGGCCATAATT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSFQVV*QTKAII
Trigger: AATTATGGCCTTTGTTTGTCAAACTACTTGGAAGGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGCTGCATTAACAACTTaGGTCTTTTTGCACTACATA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTAALTT*VFLHYI
Trigger: TATGTAGTGCAAAAAGACTCAAGTTGTTAATGCAGC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAAAGAACCTTTCATCTaGTACACCACATTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTKEPFI*YTTFQE
Trigger: TTCTTGGAATGTGGTGTATCAGATGAAAGGTTCTTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAAACTGAACTACTGCTaGCAACGAAAGAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTKLNYC*QRKNFL
Trigger: CAGAAAATTCTTTCGTTGTCAGCAGTAGTTCAGTTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAAACTGAACTACTGCTaGCAACGAAAGAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNKLNYC*QRKNFL
Trigger: CAGAAAATTCTTTCGTTGTCAGCAGTAGTTCAGTTT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAACTTGCAACAAATCTaGAGTTACTGTAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTNLQQI*SYCRIL
Trigger: CAGGATTCTACAGTAACTTCAGATTTGTTGCAAGTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAACTTGCAACAAATCTaGAGTTACTGTAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNNLQQI*SYCRIL
Trigger: CAGGATTCTACAGTAACTTCAGATTTGTTGCAAGTT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATATTCTTTAACCCAATaGGTGACTTTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTYSLTQ*VTFPEV
Trigger: AACCTCAGGAAAAGTCACTCATTGGGTTAAAGAATA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTATTCTTTAACCCAATaGGTGACTTTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNYSLTQ*VTFPEV
Trigger: AACCTCAGGAAAAGTCACTCATTGGGTTAAAGAATA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAGTTCCCTTAGTTTTTaGGGAGATGCATTATTGTCT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSSLSF*GDALLS
Trigger: AGACAATAATGCATCTCCTCAAAAACTAAGGGAACT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAGTTCCCTTAGTTTTTaGGGAGATGCATTATTGTCT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSSLSF*GDALLS
Trigger: AGACAATAATGCATCTCCTCAAAAACTAAGGGAACT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCAACTGCTGCTGCATaGATATTTGCTAATGCAAAT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSTAAA*IFANAN
Trigger: ATTTGCATTAGCAAATATTCATGCAGCAGCAGTTGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATAGCCATAGCAAAATaGAGATTTAGCATGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTIAIAK*RFSMLV
Trigger: GACAAGCATGCTAAATCTTCATTTTGCTATGGCTAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTAGGCCTTTCTTACTaGATTAAAGTCAAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLGLSY*IKVKVG
Trigger: TCCAACTTTGACTTTAATTCAGTAAGAAAGGCCTAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGCATATCTGCTAGACTaGCTTATTCATTATAGCACT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNAYLLD*LIHYST
Trigger: AGTGCTATAATGAATAAGTCAGTCTAGCAGATATGC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR TCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTTATTTGCAGGTAACTaGGGAATGAACAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLFAGN*GMNKYF
Trigger: GAAGTACTTGTTCATTCCTCAGTTACCTGCAAATAA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGAAGGCAAAGAAATATaGCCAAGTACACTGGAAATA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTEGKEI*PSTLEI
Trigger: TATTTCCAGTGTACTTGGGCATATTTCTTTGCCTTC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAAAGTAATAAAGGTTTaGCTCCGACTTGTAGGGTAT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTKVIKV*LRLVGY
Trigger: ATACCCTACAAGTCGGAGGCAAACCTTTATTACTTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATTTCTAAGACTACAATaGCTTCAACAGATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTFLRLQ*LQQIPQ
Trigger: CTGAGGAATCTGTTGAAGGCATTGTAGTCTTAGAAA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACATTTTGTTCAGTTTCTaGATTAGCACTAGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNILFSF*ISTSFP
Trigger: GGGGAAACTAGTGCTAATGCAGAAACTGAACAAAAT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATTTTGTTCAGTTTCTaGATTAGCACTAGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTILFSF*ISTSFP
Trigger: GGGGAAACTAGTGCTAATGCAGAAACTGAACAAAAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp TCTCCCACGTTTCCAAGAATGACACTTAAAAACTGGCAATCAATATCCAATGTTATTAAATTCCTCAGTTaGTACTTCTTTGGCATTCAG +
Preference number: 4 (lower is better)
Translates to: SPTFPRMTLKNWQSISNVIKFLS*YFFGIQ
Trigger: CTGAATGCCAAAGAAGTAGCAACTGAGGAATTTAAT...AACATTGGATATTGATTGCCAGTTTTTAAGTGTCATTCTTGGAAACGTGGGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCTATCAATGTCATCTaGCAATCCTGCTTGGTATAT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSINVI*QSCLVY
Trigger: ATATACCAAGCAGGATTGGCAGATGACATTGATAGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATGTTTCACCAGAATATaGACGGGTTTAAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTCFTRI*TGLRKH
Trigger: ATGCTTTCTTAAACCCGTGCATATTCTGGTGAAACA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAATTCCAGCTCAATCTaGCTTTTCCATTCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTNSSSI*LFHSLQ
Trigger: TTGAAGAGAATGGAAAAGGCAGATTGAGCTGGAATT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGCTCCGAGTTTTGACTaGAAATGTGAGTCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTAPSFD*KCESLK
Trigger: TTTTAAAGACTCACATTTCCAGTCAAAACTCGGAGC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGCTCCGAGTTTTGACTaGAAATGTGAGTCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNAPSFD*KCESLK
Trigger: TTTTAAAGACTCACATTTCCAGTCAAAACTCGGAGC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTATTTTCCTTATCTTaGCTTTCAGTGGTAGACTCT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLFSLS*LSVVDS
Trigger: AGAGTCTACCACTGAAAGCCAAGATAAGGAAAATAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCTATTTTCCTTATCTTaGCTTTCAGTGGTAGACTCT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLFSLS*LSVVDS
Trigger: AGAGTCTACCACTGAAAGCCAAGATAAGGAAAATAG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACTCAGTTCCATTTTTaGGGTTTCTTCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTQFHF*GFFWFF
Trigger: GAAAAACCAGAAGAAACCCCAAAAATGGAACTGAGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACACTCAGTTCCATTTTTaGGGTTTCTTCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNTQFHF*GFFWFF
Trigger: GAAAAACCAGAAGAAACCCCAAAAATGGAACTGAGT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACAGAAATACCAGTTTTaGTTCTCTCTTGTCCATGAA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTQKYQF*FSLVHE
Trigger: TTCATGGACAAGAGAGAACCAAAACTGGTATTTCTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCAGAAATACCAGTTTTaGTTCTCTCTTGTCCATGAA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNQKYQF*FSLVHE
Trigger: TTCATGGACAAGAGAGAACCAAAACTGGTATTTCTG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGAGATTTCATCTTCTTaGGATCTTTTTAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTEISSS*DLFSPL
Trigger: GAGAGGACTAAAAAGATCCCAAGAAGATGAAATCTC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGAGATTTCATCTTCTTaGGATCTTTTTAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNEISSS*DLFSPL
Trigger: GAGAGGACTAAAAAGATCCCAAGAAGATGAAATCTC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGTAAACACTTTCTGTTaGGCATGGTATGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTVNTFC*AWYGFF
Trigger: AAAGAATCCATACCATGCCCAACAGAAAGTGTTTAC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGTAAACACTTTCTGTTaGGCATGGTATGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNVNTFC*AWYGFF
Trigger: AAAGAATCCATACCATGCCCAACAGAAAGTGTTTAC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
3UTR CAA 72 bp TCTTCAAACTTCAATGACTTACACTTTAACGGCTACTaGCAAAGAGCAATATGTAAAGCCTGGCACATAATA +
Preference number: 4 (lower is better)
Translates to: SSNFNDLHFNGY*QRAICKAWHII
Trigger: TATTATGTGCCAGGCTTTACATATTGCTCTTTGCAAGTAGCCGTTAAAGTGTAAGTCATTGAAGTTTGAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
3UTR CAA 72 bp ACAGCTTACCATAACACATTTGGTTTTAACTGTTCTTaGGAGAAAGGAAGGATAATAAGTCACTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TAYHNTFGFNCS*EKGRIISHCPS
Trigger: TGAAGGACAGTGACTTATTATCCTTCCTTTCTCCAAAGAACAGTTAAAACCAAATGTGTTATGGTAAGCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
3UTR CAA 72 bp AGTCACTGTCCTTCAGGGTTTGAAATGTTATCAACTTaGCAAAGAGTCTCTTCTTTGAAATTGTGCTATTAT +
Preference number: 4 (lower is better)
Translates to: SHCPSGFEMLST*QRVSSLKLCYY
Trigger: ATAATAGCACAATTTCAAAGAAGAGACTCTTTGCAAAGTTGATAACATTTCAAACCCTGAAGGACAGTGACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAGATATCACCCAAAGTaGTCTAGTACGTACATTTTT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNRYHPK*SSTYIF
Trigger: AAAAATGTACGTACTAGAGCACTTTGGGTGATATCT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTTAGTAGTCATAAGCTaGTCCGTAATAGATGCTATT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLVVIS*SVIDAI
Trigger: AATAGCATCTATTACGGAGCAGCTTATGACTACTAA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATTAGTAGTCATAAGCTaGTCCGTAATAGATGCTATT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLVVIS*SVIDAI
Trigger: AATAGCATCTATTACGGAGCAGCTTATGACTACTAA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAAAGTCCCTTCTCTTTaGTTTGCTTTTGGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTKVPSL*FAFGRK
Trigger: TTTTCTACCAAAAGCAAAGCAAAGAGAAGGGACTTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAGCTTTGTATTGTCATaGTCCATTGTAGATTCAGAA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSFVLS*SIVDSE
Trigger: TTCTGAATCTACAATGGAGCATGACAATACAAAGCT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAGCTTTGTATTGTCATaGTCCATTGTAGATTCAGAA +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSFVLS*SIVDSE
Trigger: TTCTGAATCTACAATGGAGCATGACAATACAAAGCT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATTAAATTCCTCAGTTaGTACTTCTTTGGCATTCAG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTIKFLS*YFFGIQ
Trigger: CTGAATGCCAAAGAAGTAGCAACTGAGGAATTTAAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAAAGTTGTCCATTTCTaGAGTCAACATGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNKVVHF*SQHVCF
Trigger: GAAACAAACATGTTGACTGCAGAAATGGACAACTTT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAAAGTTGTCCATTTCTaGAGTCAACATGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTKVVHF*SQHVCF
Trigger: GAAACAAACATGTTGACTGCAGAAATGGACAACTTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCAACTTAGTTTCTCGTaGATTTCAAATAGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNQLSFS*ISNSWL
Trigger: AAGCCAACTATTTGAAATGCACGAGAAACTAAGTTG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACAACTTAGTTTCTCGTaGATTTCAAATAGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTQLSFS*ISNSWL
Trigger: AAGCCAACTATTTGAAATGCACGAGAAACTAAGTTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAAATTTTCAGTCAACTaGTGCTGCATGAATATTTGC +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNKFSVN*CCMNIC
Trigger: GCAAATATTCATGCAGCAGCAGTTGACTGAAAATTT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR GCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAATGAAGATTTAGCATaGTTGTCTTTGCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNNEDLA*LSLLPN
Trigger: ATTTGGGAGCAAAGACAAGCATGCTAAATCTTCATT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTTCATCTTCCAAACTaGACATTATCTTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLHLPN*TLSWKK
Trigger: TTTCTTCCAAGATAATGTCCAGTTTGGAAGATGAAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGTGCCAGAAGGTTTTTaGATAATGGAATTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNVPEGF*IMEFLK
Trigger: CTTTAGAAATTCCATTATCCAAAAACCTTCTGGCAC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGTGCCAGAAGGTTTTTaGATAATGGAATTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTVPEGF*IMEFLK
Trigger: CTTTAGAAATTCCATTATCCAAAAACCTTCTGGCAC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CCA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATATCCAGTTTCCATTaGCAAGTGATAACAGTTAAC +
Preference number: 4 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTISSFH*QVITVN
Trigger: GTTAACTGTTATCACTTGCCAATGGAAACTGGATAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS TCA 90 bp CCAAACCCCAGCGCGAACCTCCTCCGGCGCCCGACACCAGACACCTaGGCCCACGCCACATTCGGGCCTGGGCCCGCTCCCGCCACCACT +
Preference number: 5 (lower is better)
Translates to: PNPSANLLRRPTPDT*AHATFGPGPAPATT
Trigger: AGTGGTGGCGGGAGCGGGCCCAGGCCCGAATGTGGCGTGGGCTCAGGTGTCTGGTGTCGGGCGCCGGAGGAGGTTCGCGCTGGGGTTTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS GCA 90 bp CCTCACACCCGCACGCCCGCCCGGGCCTCACAGCCACGCCGCGTCTaGACCCCAGGCCTCCGAATCACCAAACCCCAGCGCGAACCTCCT +
Preference number: 5 (lower is better)
Translates to: PHTRTPARASQPRRV*TPGLRITKPQREPP
Trigger: AGGAGGTTCGCGCTGGGGTTTGGTGATTCGGAGGCCTGGGGTGCAGACGCGGCGTGGCTGTGAGGCCCGGGCGGGCGTGCGGGTGTGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS TCA 90 bp AGAAAATCCAGTGACCGATGGAAACAGCCCCGCGGCGGCCCAGTGTaGGTCCGGCCCTCACACCCGCACGCCCGCCCGGGCCTCACAGCC +
Preference number: 5 (lower is better)
Translates to: RKSSDRWKQPRGGPV*VRPSHPHARPGLTA
Trigger: GGCTGTGAGGCCCGGGCGGGCGTGCGGGTGTGAGGGCCGGACTCACACTGGGCCGCCGCGGGGCTGTTTCCATCGGTCACTGGATTTTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS TCA 90 bp GCAGAAGGGTCTTCCAAAGTCTCCAACAGCGGCGCGAGGGGGCTCTaGCCCCTGGCCGTCATGTCGGCCACCGCGTGCGGCGCGCTCCCT +
Preference number: 5 (lower is better)
Translates to: AEGSSKVSNSGARGL*PLAVMSATACGALP
Trigger: AGGGAGCGCGCCGCACGCGGTGGCCGACATGACGGCCAGGGGTCAGAGCCCCCTCGCGCCGCTGTTGGAGACTTTGGAAGACCCTTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428287.6
ENST00000494333.1
CDS CCA 90 bp CCGGCGCCCGACACCAGACACCTGAGCCCACGCCACATTCGGGCCTaGGCCCGCTCCCGCCACCACTTTCCCGGGCAGCTTTCAACAGAG +
Preference number: 5 (lower is better)
Translates to: PAPDTRHLSPRHIRA*ARSRHHFPGQLSTE
Trigger: CTCTGTTGAAAGCTGCCCGGGAAAGTGGTGGCGGGAGCGGGCCCAGGCCCGAATGTGGCGTGGGCTCAGGTGTCTGGTGTCGGGCGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS GCA 90 bp GCTGCCAGAGCTCGACTTTCCCAGCTCCGGCTGTTTACTCACGCGTaGGGCGCGCTCCCTCCTAGACCAAGATGGCGGCTGGGCGGGCCC +
Preference number: 5 (lower is better)
Translates to: AARARLSQLRLFTHA*GALPPRPRWRLGGP
Trigger: GGGCCCGCCCAGCCGCCATCTTGGTCTAGGAGGGAGCGCGCCGCACGCGTGAGTAAACAGCCGGAGCTGGGAAAGTCGAGCTCTGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453091.6
CDS TCA 90 bp GCAGAAGGGTCTTCCAAAGTCTCCAACAGCGGCGCGAGGGGGCTCTaGCCCCTGGCCGTCATGTCGGCCACCCTGAGGCCCGAACCGGAA +
Preference number: 5 (lower is better)
Translates to: AEGSSKVSNSGARGL*PLAVMSATLRPEPE
Trigger: TTCCGGTTCGGGCCTCAGGGTGGCCGACATGACGGCCAGGGGTCAGAGCCCCCTCGCGCCGCTGTTGGAGACTTTGGAAGACCCTTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS TCA 90 bp ATGTCGGCCACCCTGAGGCCCGAACCGGAAGAGGAGAAAATCCAGTaGCCGATGGAAACAGCCCCGCGGCGGCCCAGTGTGAGTCCGGCC +
Preference number: 5 (lower is better)
Translates to: MSATLRPEPEEEKIQ*PMETAPRRPSVSPA
Trigger: GGCCGGACTCACACTGGGCCGCCGCGGGGCTGTTTCCATCGGTCACTGGATTTTCTCCTCTTCCGGTTCGGGCCTCAGGGTGGCCGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS TCA 90 bp GCAGAAGGGTCTTCCAAAGTCTCCAACAGCGGCGCGAGGGGGCTCTaGCCCCTGGCCGTCATGTCGGCCACCCTAGGAAGATCAGGACAG +
Preference number: 5 (lower is better)
Translates to: AEGSSKVSNSGARGL*PLAVMSATLGRSGQ
Trigger: CTGTCCTGATCTTCCTAGGGTGGCCGACATGACGGCCAGGGGTCAGAGCCCCCTCGCGCCGCTGTTGGAGACTTTGGAAGACCCTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCTTAGCTCTAATGAGTaGTCCCAGGCCTCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGLSSNE*SQASCP
Trigger: TGGGCAAGAGGCCTGGGACAACTCATTAGAGCTAAG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp TTAAATGTAAGGCACAGCCCACAGGCACCTAGGGGTGCTGAGGAAGATGCCTCTCTGGATATCCCAGGCTaGCAGTGGGGCTGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: LNVRHSPQAPRGAEEDASLDIPG*QWGCCA
Trigger: TGCACAACAGCCCCACTGCAAGCCTGGGATATCCAG...AGAGGCATCTTCCTCAGCACCCCTAGGTGCCTGTGGGCTGTGCCTTACATTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGAGATGCTCTTCTAGTTaGATACCGTGTTCGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGRCSSS*IPCSAS
Trigger: AGAGGCCGAACACGGTATCAAACTAGAAGAGCATCT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp GGCTGTTGTGCAGCCCTCCACAACTCCCATCCTGCCCCAGGAAATGTGTGCCCATCAGTTGCTACTTCTTaGGCATTCAGTTTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GCCAALHNSHPAPGNVCPSVATS*AFSLAV
Trigger: CACAGCTAAACTGAATGCCAAAGAAGTAGCAACTGA...TGGGCACACATTTCCTGGGGCAGGATGGGAGTTGTGGAGGGCTGCACAACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp GGATATCCCAGGCTTGCAGTGGGGCTGTTGTGCAGCCCTCCACAACTCCCATCCGTGTCACAAACAAAGTaGTCCATTTCTGCAGTCAAC +
Preference number: 5 (lower is better)
Translates to: GYPRLAVGLLCSPPQLPSVSQTK*SISAVN
Trigger: GTTGACTGCAGAAATGGACAACTTTGTTTGTGACAC...GGATGGGAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAGCCTGGGATATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGGCTCATTCTTCTTTTaGGACCAATCTGAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGGSFFF*DQSEGL
Trigger: GAGACCTTCAGATTGGTCCAAAAAGAAGAATGAGCC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGACCAACATCATCACTTaGGCAAAAGTGGCATTCCAG +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGTNIIT*AKVAFQ
Trigger: CTGGAATGCCACTTTTGCCAAAGTGATGATGTTGGT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCTGCAGTCAACATGTTaGTTTCAGCTTCATCAGGCT +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGLQSTC*FQLHQA
Trigger: AGCCTGATGAAGCTGAAACAAACATGTTGACTGCAG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS GCA 90 bp ATGCTCGTAGACGGAGAAGCCAAAGGAGACCAGACACAGCGTGTCTaGATGCCACTAGGACTGTCATTTGCTGACACAAGTGAAGGATCA +
Preference number: 5 (lower is better)
Translates to: MLVDGEAKGDQTQRV*MPLGLSFADTSEGS
Trigger: TGATCCTTCACTTGTGTCAGCAAATGACAGTCCTAGTGGCATGCAGACACGCTGTGTCTGGTCTCCTTTGGCTTCTCCGTCTACGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGATTTCTGGACTGGTTTaGTCAAGAGAACCACACTCA +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGISGLV*SREPHS
Trigger: TGAGTGTGGTTCTCTTGACAAAACCAGTCCAGAAAT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTCAGTTGCTACTTCTTaGGCATTCAGTTTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGSVATS*AFSLAV
Trigger: CACAGCTAAACTGAATGCCAAAGAAGTAGCAACTGA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCAATGGTTTTCAAACTaGTACAAGTGGCAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGQWFSN*YKWQSS
Trigger: GCTGCTTTGCCACTTGTACAAGTTTGAAAACCATTG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGTATCAGCATATAAGCTaGCTGCCCAGTAAATTCAGC +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGYQHIS*LPSKFS
Trigger: GCTGAATTTACTGGGCAGCAAGCTTATATGCTGATA...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCACAACCTAGATCTCTaGCATGTGCAGTTCACAATA +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGHNLDL*HVQFTI
Trigger: TATTGTGAACTGCACATGCAAGAGATCTAGGTTGTG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTGTCCAAGGACCCCACGTTGAGAATCACTATTTCAACAGAATTCTTCCTCTTCCTTGCAGTGGGGCTGTaGTGCAGCCCTCCACAACTC +
Preference number: 5 (lower is better)
Translates to: LSKDPTLRITISTEFFLFLAVGL*CSPPQL
Trigger: GAGTTGTGGAGGGCTGCACAACAGCCCCACTGCAAG...GAAGAGGAAGAATTCTGTTGAAATAGTGATTCTCAACGTGGGGTCCTTGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGGCTGCATTAACAACTaGAGTCTTTTTGCACTACAT +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGGCINN*SLFALH
Trigger: ATGTAGTGCAAAAAGACTCAAGTTGTTAATGCAGCC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGAAACTGGACATTATCTaGGAAGAAAGTTCCTCACAG +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGKLDII*EESSSQ
Trigger: CTGTGAGGAACTTTCTTCCAAGATAATGTCCAGTTT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGACTATTTTCCTTATCTaGGCTTTCAGTGGTAGACTC +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGTIFLI*AFSGRL
Trigger: GAGTCTACCACTGAAAGCCAAGATAAGGAAAATAGT...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGCCTACTTCTCTTGTGTaGGCATTCAAGTGTTTGAAA +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGPTSLV*AFKCLK
Trigger: TTTCAAACACTTGAATGCCAACACAAGAGAAGTAGG...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CAGCCCTCCACAACTCCCATCCTGCCCCAGGAAATGTGTGCCCAATTCATCTCTAGTTTTGGTTCTCTCTaGTCCATGAAAGCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: QPSTTPILPQEMCAQFISSFGSL*SMKASF
Trigger: GAAGCTAGCTTTCATGGACAAGAGAGAACCAAAACT...AGAGATGAATTGGGCACACATTTCCTGGGGCAGGATGGGAGTTGTGGAGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS CCA 90 bp GTTCGGCCTCTGACTAGTTTCTCAGAGGACTTATCTACAATGTCCTaGGTACCATCCCCCTCAGACTTAATGTTCTCAGGGTCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: VRPLTSFSEDLSTMS*VPSPSDLMFSGSAF
Trigger: AAAGGCAGACCCTGAGAACATTAAGTCTGAGGGGGATGGTACCCAGGACATTGTAGATAAGTCCTCTGAGAAACTAGTCAGAGGCCGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACCATCTCCAGAGCAGTaGCTCCCCGCAAATGTACCT +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQPSPEQ*LPANVP
Trigger: AGGTACATTTGCGGGGAGCAACTGCTCTGGAGATGG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTGGGCCAAAGTGATCCACCTGCCGGGCCTTCAGTCATGCTTTTAATGTGCGGGGTTCTGTTACTAGTTTaGCTTTCACATCTCAGTAAG +
Preference number: 5 (lower is better)
Translates to: LGQSDPPAGPSVMLLMCGVLLLV*LSHLSK
Trigger: CTTACTGAGATGTGAAAGCAAAACTAGTAACAGAAC...CCCGCACATTAAAAGCATGACTGAAGGCCCGGCAGGTGGATCACTTTGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS GCA 90 bp GGAAGAATGGGACCTAACAATAGAGCACCGTCTATCAATGTCATCTaGCAATCCTGCTTGGTATATTGGATCTGCAAAGGAGACACGGCG +
Preference number: 5 (lower is better)
Translates to: GRMGPNNRAPSINVI*QSCLVYWICKGDTA
Trigger: CGCCGTGTCTCCTTTGCAGATCCAATATACCAAGCAGGATTGGCAGATGACATTGATAGACGGTGCTCTATTGTTAGGTCCCATTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGGCCAGTTTCAGCCATaGCCTCGCCGATCATCATTT +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQGQFQP*PRRSSF
Trigger: AAATGATGATCGGCGAGGCAATGGCTGAAACTGGCC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CCAAATCACAGCATGAAAGACTCATCTGTTACTTCGTTGGTGGTATTGGGGAGACTTAGCTCTAATGAGTaGTCCCAGGCCTCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: PNHSMKDSSVTSLVVLGRLSSNE*SQASCP
Trigger: TGGGCAAGAGGCCTGGGACAACTCATTAGAGCTAAG...TCTCCCCAATACCACCAACGAAGTAACAGATGAGTCTTTCATGCTGTGATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS TCA 90 bp GTAGTCATAAGCTGCTCCGTAATAGATGCTATTTCTTGCTGTTTCTaGAGCAATAATGGCATTCCCATCTCCAGAGCAGTTGCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: VVISCSVIDAISCCF*SNNGIPISRAVAPR
Trigger: GCGGGGAGCAACTGCTCTGGAGATGGGAATGCCATTATTGCTTCAGAAACAGCAAGAAATAGCATCTATTACGGAGCAGCTTATGACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000494333.1
ENST00000498041.1
CDS GCA 90 bp TACCACCACCACACAGTGGCTAGAGTCATCTCATATTCAGTGCAGTaGCTTGGCGGTTTTCATGAGGGAGAGATTAGATCTGAAAAACAG +
Preference number: 5 (lower is better)
Translates to: YHHHTVARVISYSVQ*LGGFHEGEIRSEKQ
Trigger: CTGTTTTTCAGATCTAATCTCTCCCTCATGAAAACCGCCAAGGCACTGCACTGAATATGAGATGACTCTAGCCACTGTGTGGTGGTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467762.2
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGGGGAGGAAGCACCTTaGTGTACAGGAGTCATAGGA +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLGEEAP*CTGVIG
Trigger: TCCTATGACTCCTGTACACAAAGGTGCTTCCTCCCC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGGCCAGTTTCAGCCATaGCCTCGCCGATCATCATTT +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLGQFQP*PRRSSF
Trigger: AAATGATGATCGGCGAGGCAATGGCTGAAACTGGCC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCTTAGCTCTAATGAGTaGTCCCAGGCCTCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLLSSNE*SQASCP
Trigger: TGGGCAAGAGGCCTGGGACAACTCATTAGAGCTAAG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS GCA 90 bp GGACCTAACAATAGAGCACCGTCTATCAATGTCATCTGCCAATCCTaGTTGGTATATTGGATCTGCAAAGGAGACACGGCGAACCTTATT +
Preference number: 5 (lower is better)
Translates to: GPNNRAPSINVICQS*LVYWICKGDTANLI
Trigger: AATAAGGTTCGCCGTGTCTCCTTTGCAGATCCAATATACCAAGCAGGATTGGCAGATGACATTGATAGACGGTGCTCTATTGTTAGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS-3UTR CAA 90 bp TTCCAATCCCCATCACTTGCTGTCCAAGGACCCCACGTTGAGAATCACTATTTCGGTAAACACTTTCTGTaGGGCATGGTATGGATTCTT +
Preference number: 5 (lower is better)
Translates to: FQSPSLAVQGPHVENHYFGKHFL*GMVWIL
Trigger: AAGAATCCATACCATGCCCAACAGAAAGTGTTTACC...GAAATAGTGATTCTCAACGTGGGGTCCTTGGACAGCAAGTGATGGGGATTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS TCA 90 bp GACTTTTCAAGATGTTCAGCCATACCACAGTCTTCCGTGACATCTTaGGGAATGACAATGTCACTGTCCATTTGCTCCTCCGTAATCATC +
Preference number: 5 (lower is better)
Translates to: DFSRCSAIPQSSVTS*GMTMSLSICSSVII
Trigger: GATGATTACGGAGGAGCAAATGGACAGTGACATTGTCATTCCTCAAGATGTCACGGAAGACTGTGGTATGGCTGAACATCTTGAAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAACTCAGCTCCGAGTTTaGACTGGAAATGTGAGTCTT +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQTQLRV*TGNVSL
Trigger: AAGACTCACATTTCCAGTCAAAACTCGGAGCTGAGT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACTTCTCCCATTTGAATaGGGGCTTGTTCAATTAGCC +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQLLPFE*GLVQLA
Trigger: GGCTAATTGAACAAGCCCCAATTCAAATGGGAGAAG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATTCAAGTCCCAAAAGTaGAATGGATGGGATTGTGGC +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQFKSQK*NGWDCG
Trigger: GCCACAATCCCATCCATTCAACTTTTGGGACTTGAA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAAGCTAGTGGTGAAGTaGGACCAGAAAGAACACAGC +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLKLVVK*DQKEHS
Trigger: GCTGTGTTCTTTCTGGTCCAACTTCACCACTAGCTT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAGATGCTCTTCTAGTTaGATACCGTGTTCGGCCTCT +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLRCSSS*IPCSAS
Trigger: AGAGGCCGAACACGGTATCAAACTAGAAGAGCATCT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CCAAATCACAGCATGAAAGACTCATCTGTTACTTCGTTGGTGGTATTGGGGAGATTCCCCAGCTGCTGTTaGTTCAGAAATCTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: PNHSMKDSSVTSLVVLGRFPSCC*FRNLSL
Trigger: CAAACTGAGATTTCTGAACAAACAGCAGCTGGGGAA...TCTCCCCAATACCACCAACGAAGTAACAGATGAGTCTTTCATGCTGTGATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp TTAATCCCAAATCACAGCATGAAAGACTCATCTGTTACTTCGTTGGTGGTATTGGGCCAGTTTCAGCCATaGCCTCGCCGATCATCATTT +
Preference number: 5 (lower is better)
Translates to: LIPNHSMKDSSVTSLVVLGQFQP*PRRSSF
Trigger: AAATGATGATCGGCGAGGCAATGGCTGAAACTGGCC...CAATACCACCAACGAAGTAACAGATGAGTCTTTCATGCTGTGATTTGGGATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS CCA 90 bp AATGAAGCAACATTTCAAGTCCCAAAAGTTGAATGGATGGGATTGTaGCCATTCCACCTAAATTCGAACTCAGGTTCATTCGGGGAGTTC +
Preference number: 5 (lower is better)
Translates to: NEATFQVPKVEWMGL*PFHLNSNSGSFGEF
Trigger: GAACTCCCCGAATGAACCTGAGTTCGAATTTAGGTGGAATGGCCACAATCCCATCCATTCAACTTTTGGGACTTGAAATGTTGCTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CCA 90 bp TTTGAGGTTTTGGTAGTTATGCCCTCATTCTCTGTTTCACCATCATaGCCAGTTTCAGCCATTGCCTCGCCGATCATCATTTCTTCATTA +
Preference number: 5 (lower is better)
Translates to: FEVLVVMPSFSVSPS*PVSAIASPIIISSL
Trigger: TAATGAAGAAATGATGATCGGCGAGGCAATGGCTGAAACTGGCCATGATGGTGAAACAGAGAATGAGGGCATAACTACCAAAACCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS CCA 90 bp CTAACAATAGAGCACCGTCTATCAATGTCATCTGCCAATCCTGCTTaGTATATTGGATCTGCAAAGGAGACACGGCGAACCTTATTAACA +
Preference number: 5 (lower is better)
Translates to: LTIEHRLSMSSANPA*YIGSAKETRRTLLT
Trigger: TGTTAATAAGGTTCGCCGTGTCTCCTTTGCAGATCCAATATACCAAGCAGGATTGGCAGATGACATTGATAGACGGTGCTCTATTGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGCAATTCTAGAGCATTaGCCTCTGATAATTCTGAGG +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQAILEH*PLIILR
Trigger: CCTCAGAATTATCAGAGGCAAATGCTCTAGAATTGC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCATACTGGATACCATTTaGCCAACCACTTCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLILDTI*PTTSEG
Trigger: TCCCTCTGAAGTGGTTGGCAAAATGGTATCCAGTAT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACCATCTCCAGAGCAGTaGCTCCCCGCAAATGTACCT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTPSPEQ*LPANVP
Trigger: AGGTACATTTGCGGGGAGCAACTGCTCTGGAGATGG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCCATCTCCAGAGCAGTaGCTCCCCGCAAATGTACCT +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNPSPEQ*LPANVP
Trigger: AGGTACATTTGCGGGGAGCAACTGCTCTGGAGATGG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAATCCGGTGTAGCTGAATaGCAGACAAGCAATAATTTC +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQSGVAE*QTSNNF
Trigger: GAAATTATTGCTTGTCTGCAATTCAGCTACACCGGA...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCACCAACATCATCACTTaGGCAAAAGTGGCATTCCAG +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLTNIIT*AKVAFQ
Trigger: CTGGAATGCCACTTTTGCCAAAGTGATGATGTTGGT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAATGTCACTGTCCATTaGCTCCTCCGTAATCATCAT +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQNVTVH*LLRNHH
Trigger: ATGATGATTACGGAGGAGCAAATGGACAGTGACATT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGTCTTCCGTGACATCTaGAGGAATGACAATGTCACT +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLVFRDI*RNDNVT
Trigger: AGTGACATTGTCATTCCTCAAGATGTCACGGAAGAC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAATTTCTGGACTGGTTTaGTCAAGAGAACCACACTCA +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQISGLV*SREPHS
Trigger: TGAGTGTGGTTCTCTTGACAAAACCAGTCCAGAAAT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCACCCTCCTACTTCTCTaGTGTTGGCATTCAAGTGTT +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLTLLLL*CWHSSV
Trigger: AACACTTGAATGCCAACACAAGAGAAGTAGGAGGGT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTTCCCCAGCTGCTGTTaGTTCAGAAATCTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLFPSCC*FRNLSL
Trigger: CAAACTGAGATTTCTGAACAAACAGCAGCTGGGGAA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGTGTCACAAACAAAGTaGTCCATTTCTGCAGTCAAC +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQVSQTK*SISAVN
Trigger: GTTGACTGCAGAAATGGACAACTTTGTTTGTGACAC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAATCTGCCAATCCTGCTaGGTATATTGGATCTGCAAA +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQICQSC*VYWICK
Trigger: TTTGCAGATCCAATATACCAAGCAGGATTGGCAGAT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTGCTTGTGCTTGTTGGTCCAACGATACTAGGGAAGTCCTTTGTATATATCTCCATCTGCCAATCCTGCTaGGTATATTGGATCTGCAAA +
Preference number: 5 (lower is better)
Translates to: LLVLVGPTILGKSFVYISICQSC*VYWICK
Trigger: TTTGCAGATCCAATATACCAAGCAGGATTGGCAGAT...GGAGATATATACAAAGGACTTCCCTAGTATCGTTGGACCAACAAGCACAAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCCTATGGGAGAACTATaGGAAGAATGGGACCTAACA +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLPMGEL*EEWDLT
Trigger: TGTTAGGTCCCATTCTTCCAATAGTTCTCCCATAGG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGGTAAACACTTTCTGTaGGGCATGGTATGGATTCTT +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQGKHFL*GMVWIL
Trigger: AAGAATCCATACCATGCCCAACAGAAAGTGTTTACC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCCCCAATTTTGTTTCTaGCCTCACCACTTACTCTTC +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLPQFCF*PHHLLF
Trigger: GAAGAGTAAGTGGTGAGGCAAGAAACAAAATTGGGG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp TCTCCCACGTTTCCAAGAATGACACTTAAAAACTGGCAATCAATATCCAATGTTCTTCCTGCCATCTGCTaGTGCTTGTTGGTCCAACGA +
Preference number: 5 (lower is better)
Translates to: SPTFPRMTLKNWQSISNVLPAIC*CLLVQR
Trigger: TCGTTGGACCAACAAGCACAAGCAGATGGCAGGAAG...AACATTGGATATTGATTGCCAGTTTTTAAGTGTCATTCTTGGAAACGTGGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS TCA 90 bp AAAGGTATGACCAGTTTTGCCCACCTCACTGCCTCTTCTCCCATTTaGATTGGGGCTTGTTCAATTAGCCTTACGATAACATTTAATGCT +
Preference number: 5 (lower is better)
Translates to: KGMTSFAHLTASSPI*IGACSISLTITFNA
Trigger: AGCATTAAATGTTATCGTAAGGCTAATTGAACAAGCCCCAATTCAAATGGGAGAAGAGGCAGTGAGGTGGGCAAAACTGGTCATACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000494333.1
CDS TCA 90 bp CTTCTTCCTAGAACCTTCTTCTTTTGCCTCCGAACTATCAGATTCTaGGTTTTCAATGCTGGAAAGCAAACCCTGAGATGCTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: LLPRTFFFCLRTIRF*VFNAGKQTLRCSSS
Trigger: ACTAGAAGAGCATCTCAGGGTTTGCTTTCCAGCATTGAAAACTCAGAATCTGATAGTTCGGAGGCAAAAGAAGAAGGTTCTAGGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS TCA 90 bp GTCCATTTCTGCAGTCAACATGTTTGTTTCAGCTTCATCAGGCTTTaGGGTTTTGGTAGTTATGCCCTCATTCTCTGTTTCACCATCATG +
Preference number: 5 (lower is better)
Translates to: VHFCSQHVCFSFIRL*GFGSYALILCFTIM
Trigger: CATGATGGTGAAACAGAGAATGAGGGCATAACTACCAAAACCTCAAAGCCTGATGAAGCTGAAACAAACATGTTGACTGCAGAAATGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS TCA 90 bp ATCTCCCACGTTTCCAAGAATGACACTGAGGGGAGATACCGAGGTTaGGGATTTATCATGATGTGTTACTATGTTTCTCATTTTCCACTG +
Preference number: 5 (lower is better)
Translates to: ISHVSKNDTEGRYRG*GFIMMCYYVSHFPL
Trigger: CAGTGGAAAATGAGAAACATAGTAACACATCATGATAAATCCTCAACCTCGGTATCTCCCCTCAGTGTCATTCTTGGAAACGTGGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484077.1
CDS CCA 90 bp GACCCAACAAGAAATGAAGCAACATTTCAAGTCCCAAAAGTTGAATaGATGGGATTGTGGCCATTCCACCTAAATTCGAACTCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: DPTRNEATFQVPKVE*MGLWPFHLNSNSGS
Trigger: TGAACCTGAGTTCGAATTTAGGTGGAATGGCCACAATCCCATCCATTCAACTTTTGGGACTTGAAATGTTGCTTCATTTCTTGTTGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGCAATTCTAGAGCATTaGCCTCTGATAATTCTGAGG +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLAILEH*PLIILR
Trigger: CCTCAGAATTATCAGAGGCAAATGCTCTAGAATTGC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAGTTGCAAGAGAGAATaGATGAAACTCCCACTTCGA +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLSCKRE*MKLPLR
Trigger: TCGAAGTGGGAGTTTCATCAATTCTCTCTTGCAACT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGGGGAGGAAGCACCTTaGTGTACAGGAGTCATAGGA +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTGEEAP*CTGVIG
Trigger: TCCTATGACTCCTGTACACAAAGGTGCTTCCTCCCC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGGGGAGGAAGCACCTTaGTGTACAGGAGTCATAGGA +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNGEEAP*CTGVIG
Trigger: TCCTATGACTCCTGTACACAAAGGTGCTTCCTCCCC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAAAACTGGACATTATCTaGGAAGAAAGTTCCTCACAG +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQKLDII*EESSSQ
Trigger: CTGTGAGGAACTTTCTTCCAAGATAATGTCCAGTTT...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCAAAGTAATAAAGGTTaGCCTCCGACTTGTAGGGTA +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLQSNKG*PPTCRV
Trigger: TACCCTACAAGTCGGAGGCAAACCTTTATTACTTTG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAACTGATATCCCTATTTTaGAGGATTCTCCCAAACTAC +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQLISLF*RILPNY
Trigger: GTAGTTTGGGAGAATCCTCAAAAATAGGGATATCAG...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp TGCCTGAACAGAGAGGTTGACTTGTTGAATCTGTCTTTTCTGTCTGACGTCTGTGACTCAGTTCCATTTTaGGGGTTTCTTCTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: CLNREVDLLNLSFLSDVCDSVPF*GFLLVF
Trigger: AAAAACCAGAAGAAACCCCAAAAATGGAACTGAGTC...ACAGACGTCAGACAGAAAAGACAGATTCAACAAGTCAACCTCTCTGTTCAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAGTTTTGGTTCTCTCTaGTCCATGAAAGCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLSFGSL*SMKASF
Trigger: GAAGCTAGCTTTCATGGACAAGAGAGAACCAAAACT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGGCCAGTTTCAGCCATaGCCTCGCCGATCATCATTT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTGQFQP*PRRSSF
Trigger: AAATGATGATCGGCGAGGCAATGGCTGAAACTGGCC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGGTAAACACTTTCTGTaGGGCATGGTATGGATTCTT +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLGKHFL*GMVWIL
Trigger: AAGAATCCATACCATGCCCAACAGAAAGTGTTTACC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTTAGCTCTAATGAGTaGTCCCAGGCCTCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLSSNE*SQASCP
Trigger: TGGGCAAGAGGCCTGGGACAACTCATTAGAGCTAAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCTTAGCTCTAATGAGTaGTCCCAGGCCTCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLSSNE*SQASCP
Trigger: TGGGCAAGAGGCCTGGGACAACTCATTAGAGCTAAG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTGCTTGTGCTTGTTGGTCCAACGATACTAGGGAAGTCCTTTGTATATATCTCCACTGTCCTTCAGGGTTaGAAATGTTATCAACTTTGC +
Preference number: 5 (lower is better)
Translates to: LLVLVGPTILGKSFVYISTVLQG*KCYQLC
Trigger: GCAAAGTTGATAACATTTCAAACCCTGAAGGACAGT...GGAGATATATACAAAGGACTTCCCTAGTATCGTTGGACCAACAAGCACAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCTATCAGCATATAAGCTaGCTGCCCAGTAAATTCAGC +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLYQHIS*LPSKFS
Trigger: GCTGAATTTACTGGGCAGCAAGCTTATATGCTGATA...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCACAACCTAGATCTCTaGCATGTGCAGTTCACAATA +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLHNLDL*HVQFTI
Trigger: TATTGTGAACTGCACATGCAAGAGATCTAGGTTGTG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AATGTTCTAATCTTCCTGCCATCTGCTTGTGCTTGTTGGTCCAACGATACTAGGAACAGAGAGGTTGACTaGTTGAATCTGTCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: NVLIFLPSACACWSNDTRNREVD*LNLSFL
Trigger: CAGAAAAGACAGATTCAACAAGTCAACCTCTCTGTT...CCTAGTATCGTTGGACCAACAAGCACAAGCAGATGGCAGGAAGATTAGAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp ATCTCTGGGCTCACCTTGTATCTTAATCCCAAATCACAGCATGAAAGACTCATCTCATCTGTTACTTCGTaGGTGGTATTGGGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: ISGLTLYLNPKSQHERLISSVTS*VVLGRK
Trigger: TTTTCTCCCCAATACCACCAACGAAGTAACAGATGA...GATGAGTCTTTCATGCTGTGATTTGGGATTAAGATACAAGGTGAGCCCAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS GCA 90 bp TTTTTAATCATGGGTGCTCCACTACGAAATCCAAGTTCTTCTAGTTaGAAGAGAGAATTGATGAAACTCCCACTTCGATGCAAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: FLIMGAPLRNPSSSS*KRELMKLPLRCKVL
Trigger: AAGGACCTTGCATCGAAGTGGGAGTTTCATCAATTCTCTCTTGCAACTAGAAGAACTTGGATTTCGTAGTGGAGCACCCATGATTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS GCA 90 bp CTGTATTTAACATGTGATAACTGCCAAATTCTTTTCCAAGGTGGCTaGACTCTTTTCCACTTCCACCAGTGGTTTATGAAGGACCCAATT +
Preference number: 5 (lower is better)
Translates to: LYLTCDNCQILFQGG*TLFHFHQWFMKDPI
Trigger: AATTGGGTCCTTCATAAACCACTGGTGGAAGTGGAAAAGAGTGCAGCCACCTTGGAAAAGAATTTGGCAGTTATCACATGTTAAATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457745.1
CDS CCA 90 bp CACAGTTCACCAATGGTGGGTAAACACTTTCTGTTGGGCATGGTATaGATTCTTTGGCCATTTCTGAAATTAAACACTTCTTTGAGCTCT +
Preference number: 5 (lower is better)
Translates to: HSSPMVGKHFLLGMV*ILWPFLKLNTSLSS
Trigger: AGAGCTCAAAGAAGTGTTTAATTTCAGAAATGGCCAAAGAATCCATACCATGCCCAACAGAAAGTGTTTACCCACCATTGGTGAACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000454583.6
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGGCTGCATTAACAACTaGAGTCTTTTTGCACTACAT +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLGCINN*SLFALH
Trigger: ATGTAGTGCAAAAAGACTCAAGTTGTTAATGCAGCC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCACCACTTTCTCTTCTaGATCTTGAATGTCAACACT +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLHHFLF*ILNVNT
Trigger: AGTGTTGACATTCAAGATCAAGAAGAGAAAGTGGTG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCTGATATCCCTATTTTaGAGGATTCTCCCAAACTAC +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLLISLF*RILPNY
Trigger: GTAGTTTGGGAGAATCCTCAAAAATAGGGATATCAG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCTGGTTTTTCTTCTTTaGTCTCCAAAGATTCCTGTG +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLLVFLL*SPKIPV
Trigger: CACAGGAATCTTTGGAGACAAAAGAAGAAAAACCAG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CCTAAATCTCCCACGTTTCCAAGAATGACACTTAAAAACTGGCAATCAATATCCCTGCAGTCAACATGTTaGTTTCAGCTTCATCAGGCT +
Preference number: 5 (lower is better)
Translates to: PKSPTFPRMTLKNWQSISLQSTC*FQLHQA
Trigger: AGCCTGATGAAGCTGAAACAAACATGTTGACTGCAG...GGATATTGATTGCCAGTTTTTAAGTGTCATTCTTGGAAACGTGGGAGATTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp TTAATCCCAAATCACAGCATGAAAGACTCATCTGTTACTTCGTTGGTGGTATTGCCTATGGGAGAACTATaGGAAGAATGGGACCTAACA +
Preference number: 5 (lower is better)
Translates to: LIPNHSMKDSSVTSLVVLPMGEL*EEWDLT
Trigger: TGTTAGGTCCCATTCTTCCAATAGTTCTCCCATAGG...CAATACCACCAACGAAGTAACAGATGAGTCTTTCATGCTGTGATTTGGGATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp GGGGCCCAATGCAGATCTACTGAATCAGAATCCACTTGTTCATATGCACATCAAGAAGATTTAGCATGCTaGTCTTTGCTCCCAAATATT +
Preference number: 5 (lower is better)
Translates to: GAQCRSTESESTCSYAHQEDLAC*SLLPNI
Trigger: AATATTTGGGAGCAAAGACAAGCATGCTAAATCTTC...TTGATGTGCATATGAACAAGTGGATTCTGATTCAGTAGATCTGCATTGGGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AATGTTCTAATCTTCCTGCCATCTGCTTGTGCTTGTTGGTCCAACGATACTAGGTGTGTCATACAGGTGTaGTATAAAGAAAACGTTGGA +
Preference number: 5 (lower is better)
Translates to: NVLIFLPSACACWSNDTRCVIQV*YKENVG
Trigger: TCCAACGTTTTCTTTATACAACACCTGTATGACACA...CCTAGTATCGTTGGACCAACAAGCACAAGCAGATGGCAGGAAGATTAGAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS CCA 90 bp GGAGAAGTTTTAACACTTTTTCCTATGGGAGAACTATTGGAAGAATaGGACCTAACAATAGAGCACCGTCTATCAATGTCATCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: GEVLTLFPMGELLEE*DLTIEHRLSMSSAN
Trigger: ATTGGCAGATGACATTGATAGACGGTGCTCTATTGTTAGGTCCCATTCTTCCAATAGTTCTCCCATAGGAAAAAGTGTTAAAACTTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCAATGCTTATTGTACTTaGAATCAGAGGCACACAAAC +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLNAYCT*NQRHTN
Trigger: GTTTGTGTGCCTCTGATTCAAAGTACAATAAGCATT...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCCCTGGTTTCTCTTTTTaGTTACCTGATTCAGTAACT +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLPGFSF*LPDSVT
Trigger: AGTTACTGAATCAGGTAACAAAAAAGAGAAACCAGG...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAAGCTAGTGGTGAAGTaGGACCAGAAAGAACACAGC +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTKLVVK*DQKEHS
Trigger: GCTGTGTTCTTTCTGGTCCAACTTCACCACTAGCTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAAGCTAGTGGTGAAGTaGGACCAGAAAGAACACAGC +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNKLVVK*DQKEHS
Trigger: GCTGTGTTCTTTCTGGTCCAACTTCACCACTAGCTT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACATGCCGGTGATTGAGTaGCCAATAGTGAAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNMPVIE*PIVKRV
Trigger: TACCCTCTTCACTATTGGCAACTCAATCACCGGCAT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATGCCGGTGATTGAGTaGCCAATAGTGAAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTMPVIE*PIVKRV
Trigger: TACCCTCTTCACTATTGGCAACTCAATCACCGGCAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAGATGCTCTTCTAGTTaGATACCGTGTTCGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTRCSSS*IPCSAS
Trigger: AGAGGCCGAACACGGTATCAAACTAGAAGAGCATCT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp AAATCCAAAATAGATTTCATAGATATGGAAATGATGGGCCAGGAGCGGTGGCTCGAAGATTTAGCATGCTaGTCTTTGCTCCCAAATATT +
Preference number: 5 (lower is better)
Translates to: KSKIDFIDMEMMGQERWLEDLAC*SLLPNI
Trigger: AATATTTGGGAGCAAAGACAAGCATGCTAAATCTTC...GAGCCACCGCTCCTGGCCCATCATTTCCATATCTATGAAATCTATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp TATCTTAATCCCAAATCACAGCATGAAAGACTCATCTGTTACTTCGTTGGTGGTATCTCTGGGCTCACCTaGTATCTTAATCCCAAATCA +
Preference number: 5 (lower is better)
Translates to: YLNPKSQHERLICYFVGGISGLT*YLNPKS
Trigger: TGATTTGGGATTAAGATACAAGGTGAGCCCAGAGAT...ACCACCAACGAAGTAACAGATGAGTCTTTCATGCTGTGATTTGGGATTAAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS TCA 90 bp ACTTGCAATATTTTCTGCCTCCCTTTGATAATTTACAATGACCTATaGGTTGCACTCAAAGCCTCTGTCACCAGAAACAGCTTATATTGC +
Preference number: 5 (lower is better)
Translates to: TCNIFCLPLIIYNDL*VALKASVTRNSLYC
Trigger: GCAATATAAGCTGTTTCTGGTGACAGAGGCTTTGAGTGCAACTCATAGGTCATTGTAAATTATCAAAGGGAGGCAGAAAATATTGCAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467762.2
CDS TCA 90 bp AGAGTGAAACAAACACAGGACCACATTAGCTCGGTAAAGACACAGTaGATGCACTTGCAATATTTTCTGCCTCCCTTTGATAATTTACAA +
Preference number: 5 (lower is better)
Translates to: RVKQTQDHISSVKTQ*MHLQYFLPPFDNLQ
Trigger: TTGTAAATTATCAAAGGGAGGCAGAAAATATTGCAAGTGCATTCACTGTGTCTTTACCGAGCTAATGTGGTCCTGTGTTTGTTTCACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467762.2
CDS GCA 90 bp ATTATACTGGATACCATTTTGCCAACCACTTCAGAGGGAAATGTCTaGTTAGATATCACCCAAAGTGCTCTAGTACGTACATTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: IILDTILPTTSEGNV*LDITQSALVRTFLS
Trigger: AGACAAAAATGTACGTACTAGAGCACTTTGGGTGATATCTAAGCAGACATTTCCCTCTGAAGTGGTTGGCAAAATGGTATCCAGTATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000494333.1
CDS CCA 90 bp CTTGTTACTACCCCATTCTTGTTACTACCCAATAATAGATCTGTATaGATATACCAGATCTTGCTTATGCATTCATCAGTTGGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: LVTTPFLLLPNNRSV*IYQILLMHSSVGGH
Trigger: ATGCCCACCAACTGATGAATGCATAAGCAAGATCTGGTATATCCATACAGATCTATTATTGGGTAGTAACAAGAATGGGGTAGTAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457745.1
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACTCAGCTCCGAGTTTaGACTGGAAATGTGAGTCTT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTQLRV*TGNVSL
Trigger: AAGACTCACATTTCCAGTCAAAACTCGGAGCTGAGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATACTGGATACCATTTaGCCAACCACTTCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTILDTI*PTTSEG
Trigger: TCCCTCTGAAGTGGTTGGCAAAATGGTATCCAGTAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTTCTCCCATTTGAATaGGGGCTTGTTCAATTAGCC +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLLPFE*GLVQLA
Trigger: GGCTAATTGAACAAGCCCCAATTCAAATGGGAGAAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCTTCTCCCATTTGAATaGGGGCTTGTTCAATTAGCC +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLLPFE*GLVQLA
Trigger: GGCTAATTGAACAAGCCCCAATTCAAATGGGAGAAG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATTCAAGTCCCAAAAGTaGAATGGATGGGATTGTGGC +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTFKSQK*NGWDCG
Trigger: GCCACAATCCCATCCATTCAACTTTTGGGACTTGAA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGGCTCATTCTTCTTTTaGGACCAATCTGAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTGSFFF*DQSEGL
Trigger: GAGACCTTCAGATTGGTCCAAAAAGAAGAATGAGCC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGGCTCATTCTTCTTTTaGGACCAATCTGAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNGSFFF*DQSEGL
Trigger: GAGACCTTCAGATTGGTCCAAAAAGAAGAATGAGCC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCAGAATGTGCTTCCTaGAAGCTCAGTGTGTGGAAA +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSECAS*KLSVWK
Trigger: TTTCCACACACTGAGCTTCAAGGAAGCACATTCTGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTCAGAATGTGCTTCCTaGAAGCTCAGTGTGTGGAAA +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSECAS*KLSVWK
Trigger: TTTCCACACACTGAGCTTCAAGGAAGCACATTCTGA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACCAACATCATCACTTaGGCAAAAGTGGCATTCCAG +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTNIIT*AKVAFQ
Trigger: CTGGAATGCCACTTTTGCCAAAGTGATGATGTTGGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACACCAACATCATCACTTaGGCAAAAGTGGCATTCCAG +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNTNIIT*AKVAFQ
Trigger: CTGGAATGCCACTTTTGCCAAAGTGATGATGTTGGT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGTCTTCCGTGACATCTaGAGGAATGACAATGTCACT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTVFRDI*RNDNVT
Trigger: AGTGACATTGTCATTCCTCAAGATGTCACGGAAGAC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGTCTTCCGTGACATCTaGAGGAATGACAATGTCACT +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNVFRDI*RNDNVT
Trigger: AGTGACATTGTCATTCCTCAAGATGTCACGGAAGAC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACCCTCCTACTTCTCTaGTGTTGGCATTCAAGTGTT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTLLLL*CWHSSV
Trigger: AACACTTGAATGCCAACACAAGAGAAGTAGGAGGGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATTCCCCAGCTGCTGTTaGTTCAGAAATCTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTFPSCC*FRNLSL
Trigger: CAAACTGAGATTTCTGAACAAACAGCAGCTGGGGAA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTTCCCCAGCTGCTGTTaGTTCAGAAATCTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNFPSCC*FRNLSL
Trigger: CAAACTGAGATTTCTGAACAAACAGCAGCTGGGGAA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCTGCAGTCAACATGTTaGTTTCAGCTTCATCAGGCT +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLQSTC*FQLHQA
Trigger: AGCCTGATGAAGCTGAAACAAACATGTTGACTGCAG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTGCAGTCAACATGTTaGTTTCAGCTTCATCAGGCT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLQSTC*FQLHQA
Trigger: AGCCTGATGAAGCTGAAACAAACATGTTGACTGCAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACCTATGGGAGAACTATaGGAAGAATGGGACCTAACA +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTPMGEL*EEWDLT
Trigger: TGTTAGGTCCCATTCTTCCAATAGTTCTCCCATAGG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS TCA 90 bp CCTCCATCTAGTTCCCCAGCTGCTGTTTGTTCAGAAATCTCAGTTTaGGCATTCAATTTTACAGGTGTAGTATTATCAGAAAGACTAATA +
Preference number: 5 (lower is better)
Translates to: PPSSSPAAVCSEISV*AFNFTGVVLSERLI
Trigger: TATTAGTCTTTCTGATAATACTACACCTGTAAAATTGAATGCTCAAACTGAGATTTCTGAACAAACAGCAGCTGGGGAACTAGATGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS TCA 90 bp CTGTCATTTGCTGACACAAGTGAAGGATCAAGTTCCCTTAGTTTTTaGGGAGATGCATTATTGTCTTCTATTATTAGCTCAGAGATAGCT +
Preference number: 5 (lower is better)
Translates to: LSFADTSEGSSSLSF*GDALLSSIISSEIA
Trigger: AGCTATCTCTGAGCTAATAATAGAAGACAATAATGCATCTCCTCAAAAACTAAGGGAACTTGATCCTTCACTTGTGTCAGCAAATGACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS GCA 90 bp GTTAATGCTAGAGTTTCTGTTCTCACATGGATGGAACTCAAAGGCTaGATTAACAACTTGAGTCTTTTTGCACTACATAGTATATCTGGA +
Preference number: 5 (lower is better)
Translates to: VNARVSVLTWMELKG*INNLSLFALHSISG
Trigger: TCCAGATATACTATGTAGTGCAAAAAGACTCAAGTTGTTAATGCAGCCTTTGAGTTCCATCCATGTGAGAACAGAAACTCTAGCATTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGCAATTCTAGAGCATTaGCCTCTGATAATTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTAILEH*PLIILR
Trigger: CCTCAGAATTATCAGAGGCAAATGCTCTAGAATTGC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAGTTGCAAGAGAGAATaGATGAAACTCCCACTTCGA +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSCKRE*MKLPLR
Trigger: TCGAAGTGGGAGTTTCATCAATTCTCTCTTGCAACT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAGTTGCAAGAGAGAATaGATGAAACTCCCACTTCGA +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSCKRE*MKLPLR
Trigger: TCGAAGTGGGAGTTTCATCAATTCTCTCTTGCAACT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCCGGTGTAGCTGAATaGCAGACAAGCAATAATTTC +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSGVAE*QTSNNF
Trigger: GAAATTATTGCTTGTCTGCAATTCAGCTACACCGGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACTCCGGTGTAGCTGAATaGCAGACAAGCAATAATTTC +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNSGVAE*QTSNNF
Trigger: GAAATTATTGCTTGTCTGCAATTCAGCTACACCGGA...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAATGTCACTGTCCATTaGCTCCTCCGTAATCATCAT +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNNVTVH*LLRNHH
Trigger: ATGATGATTACGGAGGAGCAAATGGACAGTGACATT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAATGTCACTGTCCATTaGCTCCTCCGTAATCATCAT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTNVTVH*LLRNHH
Trigger: ATGATGATTACGGAGGAGCAAATGGACAGTGACATT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATTTCTGGACTGGTTTaGTCAAGAGAACCACACTCA +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTISGLV*SREPHS
Trigger: TGAGTGTGGTTCTCTTGACAAAACCAGTCCAGAAAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACATTTCTGGACTGGTTTaGTCAAGAGAACCACACTCA +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNISGLV*SREPHS
Trigger: TGAGTGTGGTTCTCTTGACAAAACCAGTCCAGAAAT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACAAAGTAATAAAGGTTaGCCTCCGACTTGTAGGGTA +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTQSNKG*PPTCRV
Trigger: TACCCTACAAGTCGGAGGCAAACCTTTATTACTTTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCAAAGTAATAAAGGTTaGCCTCCGACTTGTAGGGTA +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNQSNKG*PPTCRV
Trigger: TACCCTACAAGTCGGAGGCAAACCTTTATTACTTTG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACCTTTTATTCCCTGTTaGTTCAGCTTTACCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTPFIPC*FSFTSS
Trigger: AGAGCTGGTAAAGCTGAACAAACAGGGAATAAAAGG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ATGAAAGACTCATCTGTTACTTCGTTGGTGGTATTGGGGAGAAAATATAGTATCCTGGTTTTTCTTCTTTaGTCTCCAAAGATTCCTGTG +
Preference number: 5 (lower is better)
Translates to: MKDSSVTSLVVLGRKYSILVFLL*SPKIPV
Trigger: CACAGGAATCTTTGGAGACAAAAGAAGAAAAACCAG...GATACTATATTTTCTCCCCAATACCACCAACGAAGTAACAGATGAGTCTTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAGTTTTGGTTCTCTCTaGTCCATGAAAGCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSFGSL*SMKASF
Trigger: GAAGCTAGCTTTCATGGACAAGAGAGAACCAAAACT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACATCAGTTGCTACTTCTTaGGCATTCAGTTTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTSVATS*AFSLAV
Trigger: CACAGCTAAACTGAATGCCAAAGAAGTAGCAACTGA...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGTGTCACAAACAAAGTaGTCCATTTCTGCAGTCAAC +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNVSQTK*SISAVN
Trigger: GTTGACTGCAGAAATGGACAACTTTGTTTGTGACAC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGTGTCACAAACAAAGTaGTCCATTTCTGCAGTCAAC +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTVSQTK*SISAVN
Trigger: GTTGACTGCAGAAATGGACAACTTTGTTTGTGACAC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAATCTGCCAATCCTGCTaGGTATATTGGATCTGCAAA +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTICQSC*VYWICK
Trigger: TTTGCAGATCCAATATACCAAGCAGGATTGGCAGAT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACATCTGCCAATCCTGCTaGGTATATTGGATCTGCAAA +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNICQSC*VYWICK
Trigger: TTTGCAGATCCAATATACCAAGCAGGATTGGCAGAT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGGTAAACACTTTCTGTaGGGCATGGTATGGATTCTT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTGKHFL*GMVWIL
Trigger: AAGAATCCATACCATGCCCAACAGAAAGTGTTTACC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGGTAAACACTTTCTGTaGGGCATGGTATGGATTCTT +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNGKHFL*GMVWIL
Trigger: AAGAATCCATACCATGCCCAACAGAAAGTGTTTACC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACAATGGTTTTCAAACTaGTACAAGTGGCAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTQWFSN*YKWQSS
Trigger: GCTGCTTTGCCACTTGTACAAGTTTGAAAACCATTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp ATGAAAGACTCATCTGTTACTTCGTTGGTGGTATTGGGGAGAAAATATAGTATCACATCGTCTAGTGTCTaGTTTTCACAAAAGCCATGT +
Preference number: 5 (lower is better)
Translates to: MKDSSVTSLVVLGRKYSITSSSV*FSQKPC
Trigger: ACATGGCTTTTGTGAAAACAAGACACTAGACGATGT...GATACTATATTTTCTCCCCAATACCACCAACGAAGTAACAGATGAGTCTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp AGAATTAGCATTGTAGAGTTCATCATTAAAACCAGATCTGTGCCTGAACAGAGAACTTCGTTGGTGGTATaGGGGAGAAAATATAGTATC +
Preference number: 5 (lower is better)
Translates to: RISIVEFIIKTRSVPEQRTSLVV*GRKYSI
Trigger: GATACTATATTTTCTCCCCAATACCACCAACGAAGT...TCTCTGTTCAGGCACAGATCTGGTTTTAATGATGAACTCTACAATGCTAATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454583.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGTCCTTCCAAGTAGTTaGACAAACAAAGGCCATAAT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTVLPSS*TNKGHN
Trigger: ATTATGGCCTTTGTTTGTCAAACTACTTGGAAGGAC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGTCCTTCCAAGTAGTTaGACAAACAAAGGCCATAAT +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNVLPSS*TNKGHN
Trigger: ATTATGGCCTTTGTTTGTCAAACTACTTGGAAGGAC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGGCTGCATTAACAACTaGAGTCTTTTTGCACTACAT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTGCINN*SLFALH
Trigger: ATGTAGTGCAAAAAGACTCAAGTTGTTAATGCAGCC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAAACTGGACATTATCTaGGAAGAAAGTTCCTCACAG +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTKLDII*EESSSQ
Trigger: CTGTGAGGAACTTTCTTCCAAGATAATGTCCAGTTT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACAAACTGGACATTATCTaGGAAGAAAGTTCCTCACAG +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNKLDII*EESSSQ
Trigger: CTGTGAGGAACTTTCTTCCAAGATAATGTCCAGTTT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACTATTTTCCTTATCTaGGCTTTCAGTGGTAGACTC +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTIFLI*AFSGRL
Trigger: GAGTCTACCACTGAAAGCCAAGATAAGGAAAATAGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACACTATTTTCCTTATCTaGGCTTTCAGTGGTAGACTC +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNTIFLI*AFSGRL
Trigger: GAGTCTACCACTGAAAGCCAAGATAAGGAAAATAGT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCACCACTTTCTCTTCTaGATCTTGAATGTCAACACT +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNHHFLF*ILNVNT
Trigger: AGTGTTGACATTCAAGATCAAGAAGAGAAAGTGGTG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACACCACTTTCTCTTCTaGATCTTGAATGTCAACACT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTHHFLF*ILNVNT
Trigger: AGTGTTGACATTCAAGATCAAGAAGAGAAAGTGGTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTGATATCCCTATTTTaGAGGATTCTCCCAAACTAC +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLISLF*RILPNY
Trigger: GTAGTTTGGGAGAATCCTCAAAAATAGGGATATCAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCCTACTTCTCTTGTGTaGGCATTCAAGTGTTTGAAA +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNPTSLV*AFKCLK
Trigger: TTTCAAACACTTGAATGCCAACACAAGAGAAGTAGG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACCTACTTCTCTTGTGTaGGCATTCAAGTGTTTGAAA +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTPTSLV*AFKCLK
Trigger: TTTCAAACACTTGAATGCCAACACAAGAGAAGTAGG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCTGGTTTTTCTTCTTTaGTCTCCAAAGATTCCTGTG +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNLVFLL*SPKIPV
Trigger: CACAGGAATCTTTGGAGACAAAAGAAGAAAAACCAG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACTGGTTTTTCTTCTTTaGTCTCCAAAGATTCCTGTG +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTLVFLL*SPKIPV
Trigger: CACAGGAATCTTTGGAGACAAAAGAAGAAAAACCAG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGACTCAGTTCCATTTTaGGGGTTTCTTCTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTDSVPF*GFLLVF
Trigger: AAAAACCAGAAGAAACCCCAAAAATGGAACTGAGTC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACACTGTCCTTCAGGGTTaGAAATGTTATCAACTTTGC +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNTVLQG*KCYQLC
Trigger: GCAAAGTTGATAACATTTCAAACCCTGAAGGACAGT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGGTTTTAACTGTTCTTaGGAGAAAGGAAGGCTTAGT +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNGFNCS*EKGRLS
Trigger: ACTAAGCCTTCCTTTCTCCAAAGAACAGTTAAAACC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAACCAGACTTCTAGTTTaGTTAATGCTAGAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTTRLLV*LMLEFL
Trigger: CAGAAACTCTAGCATTAACAAAACTAGAAGTCTGGT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACACCAGACTTCTAGTTTaGTTAATGCTAGAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNTRLLV*LMLEFL
Trigger: CAGAAACTCTAGCATTAACAAAACTAGAAGTCTGGT...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAAATGCTTATTGTACTTaGAATCAGAGGCACACAAAC +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTNAYCT*NQRHTN
Trigger: GTTTGTGTGCCTCTGATTCAAAGTACAATAAGCATT...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACCTGGTTTCTCTTTTTaGTTACCTGATTCAGTAACT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTPGFSF*LPDSVT
Trigger: AGTTACTGAATCAGGTAACAAAAAAGAGAAACCAGG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGATTCAAGTTTCAGTTaGGCTGCTGGTTTCATATTT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTDSSFS*AAGFIF
Trigger: AAATATGAAACCAGCAGCCAAACTGAAACTTGAATC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGATTCAAGTTTCAGTTaGGCTGCTGGTTTCATATTT +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNDSSFS*AAGFIF
Trigger: AAATATGAAACCAGCAGCCAAACTGAAACTTGAATC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGCTTTAAGCTTTGTATaGTCATGCTCCATTGTAGAT +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTALSFV*SCSIVD
Trigger: ATCTACAATGGAGCATGACAATACAAAGCTTAAAGC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACGCTTTAAGCTTTGTATaGTCATGCTCCATTGTAGAT +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNALSFV*SCSIVD
Trigger: ATCTACAATGGAGCATGACAATACAAAGCTTAAAGC...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACAGTTCTGTTACTAGTTTaGCTTTCACATCTCAGTAAG +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTVLLLV*LSHLSK
Trigger: CTTACTGAGATGTGAAAGCAAAACTAGTAACAGAAC...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACACTTTAACGGCTACTaGCAAAGAGCAATATGTAAA +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTHFNGY*QRAICK
Trigger: TTTACATATTGCTCTTTGCAAGTAGCCGTTAAAGTG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000444746.7
CDS-3UTR CAA 90 bp CTCAGTAAGATAATTAAATTTCCTGAAAAACCACGCATAGCAGCCAAGAATACACATGGTATGGATTCTTaGGCCATTTCTGAAATCTTA +
Preference number: 5 (lower is better)
Translates to: LSKIIKFPEKPRIAAKNTHGMDS*AISEIL
Trigger: TAAGATTTCAGAAATGGCCAAAGAATCCATACCATG...TGTATTCTTGGCTGCTATGCGTGGTTTTTCAGGAAATTTAATTATCTTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000428287.6
ENST00000430328.6
ENST00000453091.6
CDS-3UTR CAA 90 bp ACAAACTTCCTAAACCTCAGTCCCAACAAACATGAATTAAACAAACCAACAAACCATGGTATGGATTCTTaGGCCATTTCTGAAATCTTA +
Preference number: 5 (lower is better)
Translates to: TNFLNLSPNKHELNKPTNHGMDS*AISEIL
Trigger: TAAGATTTCAGAAATGGCCAAAGAATCCATACCATG...GTTTGTTGGTTTGTTTAATTCATGTTTGTTGGGACTGAGGTTTAGGAAGTTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453091.6
CDS TCA 72 bp AGTGACCGATGGAAACAGCCCCGCGGCGGCCCAGTGTaGGTCCGGCCCTCACACCCGCACGCCCGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: SDRWKQPRGGPV*VRPSHPHARPG
Trigger: GCCCGGGCGGGCGTGCGGGTGTGAGGGCCGGACTCACACTGGGCCGCCGCGGGGCTGTTTCCATCGGTCACT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS GCA 72 bp CGCACGCCCGCCCGGGCCTCACAGCCACGCCGCGTCTaGACCCCAGGCCTCCGAATCACCAAACCCCAGCGC +
Preference number: 6 (lower is better)
Translates to: RTPARASQPRRV*TPGLRITKPQR
Trigger: GCGCTGGGGTTTGGTGATTCGGAGGCCTGGGGTGCAGACGCGGCGTGGCTGTGAGGCCCGGGCGGGCGTGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS TCA 72 bp AGCGCGAACCTCCTCCGGCGCCCGACACCAGACACCTaGGCCCACGCCACATTCGGGCCTGGGCCCGCTCCC +
Preference number: 6 (lower is better)
Translates to: SANLLRRPTPDT*AHATFGPGPAP
Trigger: GGGAGCGGGCCCAGGCCCGAATGTGGCGTGGGCTCAGGTGTCTGGTGTCGGGCGCCGGAGGAGGTTCGCGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS CCA 72 bp AAGTCTCCAACAGCGGCGCGAGGGGGCTCTGACCCCTaGCCGTCATGTCGGCCACCGCGTGCGGCGCGCTCC +
Preference number: 6 (lower is better)
Translates to: KSPTAARGGSDP*PSCRPPRAARS
Trigger: GGAGCGCGCCGCACGCGGTGGCCGACATGACGGCCAGGGGTCAGAGCCCCCTCGCGCCGCTGTTGGAGACTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428287.6
ENST00000494333.1
CDS TCA 72 bp TCTTCCAAAGTCTCCAACAGCGGCGCGAGGGGGCTCTaGCCCCTGGCCGTCATGTCGGCCACCGCGTGCGGC +
Preference number: 6 (lower is better)
Translates to: SSKVSNSGARGL*PLAVMSATACG
Trigger: GCCGCACGCGGTGGCCGACATGACGGCCAGGGGTCAGAGCCCCCTCGCGCCGCTGTTGGAGACTTTGGAAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428287.6
ENST00000494333.1
CDS CCA 72 bp GACACCAGACACCTGAGCCCACGCCACATTCGGGCCTaGGCCCGCTCCCGCCACCACTTTCCCGGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: DTRHLSPRHIRA*ARSRHHFPGQL
Trigger: AAGCTGCCCGGGAAAGTGGTGGCGGGAGCGGGCCCAGGCCCGAATGTGGCGTGGGCTCAGGTGTCTGGTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS TCA 72 bp TCTTCCAAAGTCTCCAACAGCGGCGCGAGGGGGCTCTaGCCCCTGGCCGTCATGTCGGCCACCCTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: SSKVSNSGARGL*PLAVMSATLRP
Trigger: GGGCCTCAGGGTGGCCGACATGACGGCCAGGGGTCAGAGCCCCCTCGCGCCGCTGTTGGAGACTTTGGAAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS GCA 72 bp GCTCGACTTTCCCAGCTCCGGCTGTTTACTCACGCGTaGGGCGCGCTCCCTCCTAGACCAAGATGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: ARLSQLRLFTHA*GALPPRPRWRL
Trigger: CAGCCGCCATCTTGGTCTAGGAGGGAGCGCGCCGCACGCGTGAGTAAACAGCCGGAGCTGGGAAAGTCGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453091.6
CDS TCA 72 bp ACCCTGAGGCCCGAACCGGAAGAGGAGAAAATCCAGTaGCCGATGGAAACAGCCCCGCGGCGGCCCAGTGTG +
Preference number: 6 (lower is better)
Translates to: TLRPEPEEEKIQ*PMETAPRRPSV
Trigger: CACACTGGGCCGCCGCGGGGCTGTTTCCATCGGTCACTGGATTTTCTCCTCTTCCGGTTCGGGCCTCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243326.9
ENST00000430328.6
CDS TCA 72 bp TCTTCCAAAGTCTCCAACAGCGGCGCGAGGGGGCTCTaGCCCCTGGCCGTCATGTCGGCCACCCTAGGAAGA +
Preference number: 6 (lower is better)
Translates to: SSKVSNSGARGL*PLAVMSATLGR
Trigger: TCTTCCTAGGGTGGCCGACATGACGGCCAGGGGTCAGAGCCCCCTCGCGCCGCTGTTGGAGACTTTGGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444746.7
ENST00000453091.6
CDS GCA 72 bp GACGGAGAAGCCAAAGGAGACCAGACACAGCGTGTCTaGATGCCACTAGGACTGTCATTTGCTGACACAAGT +
Preference number: 6 (lower is better)
Translates to: DGEAKGDQTQRV*MPLGLSFADTS
Trigger: ACTTGTGTCAGCAAATGACAGTCCTAGTGGCATGCAGACACGCTGTGTCTGGTCTCCTTTGGCTTCTCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS TCA 72 bp CCTTGCTTGACCTCAGCTGGAAACATGCACGTTGTGTaGCTCCAATTCTTTGCCACTTTGGGTGTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: PCLTSAGNMHVV*LQFFATLGVLP
Trigger: TGGAAGGACACCCAAAGTGGCAAAGAATTGGAGTCACACAACGTGCATGTTTCCAGCTGAGGTCAAGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498041.1
CDS CCA 72 bp GAGCACCGTCTATCAATGTCATCTGCCAATCCTGCTTaGTATATTGGATCTGCAAAGGAGACACGGCGAACC +
Preference number: 6 (lower is better)
Translates to: EHRLSMSSANPA*YIGSAKETRRT
Trigger: GGTTCGCCGTGTCTCCTTTGCAGATCCAATATACCAAGCAGGATTGGCAGATGACATTGATAGACGGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS TCA 72 bp AGATGTTCAGCCATACCACAGTCTTCCGTGACATCTTaGGGAATGACAATGTCACTGTCCATTTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RCSAIPQSSVTS*GMTMSLSICSS
Trigger: GGAGGAGCAAATGGACAGTGACATTGTCATTCCTCAAGATGTCACGGAAGACTGTGGTATGGCTGAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS GCA 72 bp AATAGAGCACCGTCTATCAATGTCATCTGCCAATCCTaGTTGGTATATTGGATCTGCAAAGGAGACACGGCG +
Preference number: 6 (lower is better)
Translates to: NRAPSINVICQS*LVYWICKGDTA
Trigger: CGCCGTGTCTCCTTTGCAGATCCAATATACCAAGCAGGATTGGCAGATGACATTGATAGACGGTGCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS GCA 72 bp CACACAGTGGCTAGAGTCATCTCATATTCAGTGCAGTaGCTTGGCGGTTTTCATGAGGGAGAGATTAGATCT +
Preference number: 6 (lower is better)
Translates to: HTVARVISYSVQ*LGGFHEGEIRS
Trigger: AGATCTAATCTCTCCCTCATGAAAACCGCCAAGGCACTGCACTGAATATGAGATGACTCTAGCCACTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467762.2
CDS CCA 72 bp CTGACTAGTTTCTCAGAGGACTTATCTACAATGTCCTaGGTACCATCCCCCTCAGACTTAATGTTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: LTSFSEDLSTMS*VPSPSDLMFSG
Trigger: CCCTGAGAACATTAAGTCTGAGGGGGATGGTACCCAGGACATTGTAGATAAGTCCTCTGAGAAACTAGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CCA 72 bp TTCCAAGGTGGCTGCACTCTTTTCCACTTCCACCAGTaGTTTATGAAGGACCCAATTTCTCCACATCCTTTC +
Preference number: 6 (lower is better)
Translates to: FQGGCTLFHFHQ*FMKDPISPHPF
Trigger: GAAAGGATGTGGAGAAATTGGGTCCTTCATAAACCACTGGTGGAAGTGGAAAAGAGTGCAGCCACCTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457745.1
CDS CAA 90 bp CTTGCTGTTTCTGAAGCAATAATGGCATTCCCATCTCCAGAGCAGTaGCTCCCCGCAAATGTACCTTTTGTGCTGAATGAACCACTAAAG +
Preference number: 6 (lower is better)
Translates to: LAVSEAIMAFPSPEQ*LPANVPFVLNEPLK
Trigger: CTTTAGTGGTTCATTCAGCACAAAAGGTACATTTGCGGGGAGCAACTGCTCTGGAGATGGGAATGCCATTATTGCTTCAGAAACAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000494333.1
ENST00000498041.1
CDS TCA 72 bp GTGGCTGCACTCTTTTCCACTTCCACCAGTGGTTTATaGAGGACCCAATTTCTCCACATCCTTTCTAATGTC +
Preference number: 6 (lower is better)
Translates to: VAALFSTSTSGL*RTQFLHILSNV
Trigger: GACATTAGAAAGGATGTGGAGAAATTGGGTCCTTCATAAACCACTGGTGGAAGTGGAAAAGAGTGCAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457745.1
CDS GCA 72 bp TCTGAACCATCAAACTTCTCCAAAGTAATAAAGGTTTaGCTCCGACTTGTAGGGTATGGGGGAGTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: SEPSNFSKVIKV*LRLVGYGGVPA
Trigger: TGCTGGAACTCCCCCATACCCTACAAGTCGGAGGCAAACCTTTATTACTTTGGAGAAGTTTGATGGTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CCA 72 bp AATGATGTCAACTGGTGCCACACAGTTCACCAATGGTaGGTAAACACTTTCTGTTGGGCATGGTATGGATTC +
Preference number: 6 (lower is better)
Translates to: NDVNWCHTVHQW*VNTFCWAWYGF
Trigger: GAATCCATACCATGCCCAACAGAAAGTGTTTACCCACCATTGGTGAACTGTGTGGCACCAGTTGACATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS CAA 72 bp TCTGAAGCAATAATGGCATTCCCATCTCCAGAGCAGTaGCTCCCCGCAAATGTACCTTTTGTGCTGAATGAA +
Preference number: 6 (lower is better)
Translates to: SEAIMAFPSPEQ*LPANVPFVLNE
Trigger: TTCATTCAGCACAAAAGGTACATTTGCGGGGAGCAACTGCTCTGGAGATGGGAATGCCATTATTGCTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000494333.1
ENST00000498041.1
CDS CAA 72 bp TGCCCAAGTACACTGGAAATAATGCCGGTGATTGAGTaGCCAATAGTGAAGAGGGTATCAGAATGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: CPSTLEIMPVIE*PIVKRVSECAS
Trigger: GGAAGCACATTCTGATACCCTCTTCACTATTGGCAACTCAATCACCGGCATTATTTCCAGTGTACTTGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 72 bp AAGATGTTCAGCCATACCACAGTCTTCCGTGACATCTaGAGGAATGACAATGTCACTGTCCATTTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: KMFSHTTVFRDI*RNDNVTVHLLL
Trigger: GAGGAGCAAATGGACAGTGACATTGTCATTCCTCAAGATGTCACGGAAGACTGTGGTATGGCTGAACATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 72 bp GGTATGAGAACTAAAACAAAAAGGCAGAGCGTAACCTaGCTTGACCTCAGCTGGAAACATGCACGTTGTGTG +
Preference number: 6 (lower is better)
Translates to: GMRTKTKRQSVT*LDLSWKHARCV
Trigger: CACACAACGTGCATGTTTCCAGCTGAGGTCAAGCAAGGTTACGCTCTGCCTTTTTGTTTTAGTTCTCATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498041.1
CDS CAA 90 bp GGTGCTCCACTACGAAATCCAAGTTCTTCTAGTTGCAAGAGAGAATaGATGAAACTCCCACTTCGATGCAAGGTCCTTCCAAGTAGTTTG +
Preference number: 6 (lower is better)
Translates to: GAPLRNPSSSSCKRE*MKLPLRCKVLPSSL
Trigger: CAAACTACTTGGAAGGACCTTGCATCGAAGTGGGAGTTTCATCAATTCTCTCTTGCAACTAGAAGAACTTGGATTTCGTAGTGGAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 90 bp GGACTTTTCAAGATGTTCAGCCATACCACAGTCTTCCGTGACATCTaGAGGAATGACAATGTCACTGTCCATTTGCTCCTCCGTAATCAT +
Preference number: 6 (lower is better)
Translates to: GLFKMFSHTTVFRDI*RNDNVTVHLLLRNH
Trigger: ATGATTACGGAGGAGCAAATGGACAGTGACATTGTCATTCCTCAAGATGTCACGGAAGACTGTGGTATGGCTGAACATCTTGAAAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 90 bp CCTAACAATAGAGCACCGTCTATCAATGTCATCTGCCAATCCTGCTaGGTATATTGGATCTGCAAAGGAGACACGGCGAACCTTATTAAC +
Preference number: 6 (lower is better)
Translates to: PNNRAPSINVICQSC*VYWICKGDTANLIN
Trigger: GTTAATAAGGTTCGCCGTGTCTCCTTTGCAGATCCAATATACCAAGCAGGATTGGCAGATGACATTGATAGACGGTGCTCTATTGTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS GCA 72 bp ATGGGTGCTCCACTACGAAATCCAAGTTCTTCTAGTTaGAAGAGAGAATTGATGAAACTCCCACTTCGATGC +
Preference number: 6 (lower is better)
Translates to: MGAPLRNPSSSS*KRELMKLPLRC
Trigger: GCATCGAAGTGGGAGTTTCATCAATTCTCTCTTGCAACTAGAAGAACTTGGATTTCGTAGTGGAGCACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS GCA 72 bp GGACCTAACAATAGAGCACCGTCTATCAATGTCATCTaGCAATCCTGCTTGGTATATTGGATCTGCAAAGGA +
Preference number: 6 (lower is better)
Translates to: GPNNRAPSINVI*QSCLVYWICKG
Trigger: TCCTTTGCAGATCCAATATACCAAGCAGGATTGGCAGATGACATTGATAGACGGTGCTCTATTGTTAGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS CCA 72 bp CTTGTAGAGCAGCACTACTCAGCTCCGAGTTTTGACTaGAAATGTGAGTCTTTAAAACTTTGTACAGCCGAG +
Preference number: 6 (lower is better)
Translates to: LVEQHYSAPSFD*KCESLKLCTAE
Trigger: CTCGGCTGTACAAAGTTTTAAAGACTCACATTTCCAGTCAAAACTCGGAGCTGAGTAGTGCTGCTCTACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000494333.1
CDS CAA 72 bp CCACACAGTTCACCAATGGTGGGTAAACACTTTCTGTaGGGCATGGTATGGATTCTTTGGCCATTTCTGAAA +
Preference number: 6 (lower is better)
Translates to: PHSSPMVGKHFL*GMVWILWPFLK
Trigger: TTTCAGAAATGGCCAAAGAATCCATACCATGCCCAACAGAAAGTGTTTACCCACCATTGGTGAACTGTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS CAA 72 bp CAATACCAGTGTGACCTGGGAACATCGTCTAGTGTCTaGTTTTCACAAAAGCCATGTGTCCTAGTCTTTCTC +
Preference number: 6 (lower is better)
Translates to: QYQCDLGTSSSV*FSQKPCVLVFL
Trigger: GAGAAAGACTAGGACACATGGCTTTTGTGAAAACAAGACACTAGACGATGTTCCCAGGTCACACTGGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467762.2
CDS CAA 90 bp TCTGCAGTCAACATGTTTGTTTCAGCTTCATCAGGCTTTGAGGTTTaGGTAGTTATGCCCTCATTCTCTGTTTCACCATCATGGCCAGTT +
Preference number: 6 (lower is better)
Translates to: SAVNMFVSASSGFEV*VVMPSFSVSPSWPV
Trigger: AACTGGCCATGATGGTGAAACAGAGAATGAGGGCATAACTACCAAAACCTCAAAGCCTGATGAAGCTGAAACAAACATGTTGACTGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS CAA 90 bp CAACTGGTGCCACACAGTTCACCAATGGTGGGTAAACACTTTCTGTaGGGCATGGTATGGATTCTTTGGCCATTTCTGAAATTAAACACT +
Preference number: 6 (lower is better)
Translates to: QLVPHSSPMVGKHFL*GMVWILWPFLKLNT
Trigger: AGTGTTTAATTTCAGAAATGGCCAAAGAATCCATACCATGCCCAACAGAAAGTGTTTACCCACCATTGGTGAACTGTGTGGCACCAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000454583.6
CDS TCA 72 bp AGCTGCTCCGTAATAGATGCTATTTCTTGCTGTTTCTaGAGCAATAATGGCATTCCCATCTCCAGAGCAGTT +
Preference number: 6 (lower is better)
Translates to: SCSVIDAISCCF*SNNGIPISRAV
Trigger: AACTGCTCTGGAGATGGGAATGCCATTATTGCTTCAGAAACAGCAAGAAATAGCATCTATTACGGAGCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000494333.1
ENST00000498041.1
CDS TCA 72 bp AATATGCCCAAGTACACTGGAAATAATGCCGGTGATTaGGTTGCCAATAGTGAAGAGGGTATCAGAATGTGC +
Preference number: 6 (lower is better)
Translates to: NMPKYTGNNAGD*VANSEEGIRMC
Trigger: GCACATTCTGATACCCTCTTCACTATTGGCAACTCAATCACCGGCATTATTTCCAGTGTACTTGGGCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS TCA 72 bp AGAACCTTCTTCTTTTGCCTCCGAACTATCAGATTCTaGGTTTTCAATGCTGGAAAGCAAACCCTGAGATGC +
Preference number: 6 (lower is better)
Translates to: RTFFFCLRTIRF*VFNAGKQTLRC
Trigger: GCATCTCAGGGTTTGCTTTCCAGCATTGAAAACTCAGAATCTGATAGTTCGGAGGCAAAAGAAGAAGGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS TCA 72 bp CAAACACAGGACCACATTAGCTCGGTAAAGACACAGTaGATGCACTTGCAATATTTTCTGCCTCCCTTTGAT +
Preference number: 6 (lower is better)
Translates to: QTQDHISSVKTQ*MHLQYFLPPFD
Trigger: ATCAAAGGGAGGCAGAAAATATTGCAAGTGCATTCACTGTGTCTTTACCGAGCTAATGTGGTCCTGTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467762.2
CDS GCA 72 bp GATACCATTTTGCCAACCACTTCAGAGGGAAATGTCTaGTTAGATATCACCCAAAGTGCTCTAGTACGTACA +
Preference number: 6 (lower is better)
Translates to: DTILPTTSEGNV*LDITQSALVRT
Trigger: TGTACGTACTAGAGCACTTTGGGTGATATCTAAGCAGACATTTCCCTCTGAAGTGGTTGGCAAAATGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000494333.1
CDS GCA 72 bp ACATGTGATAACTGCCAAATTCTTTTCCAAGGTGGCTaGACTCTTTTCCACTTCCACCAGTGGTTTATGAAG +
Preference number: 6 (lower is better)
Translates to: TCDNCQILFQGG*TLFHFHQWFMK
Trigger: CTTCATAAACCACTGGTGGAAGTGGAAAAGAGTGCAGCCACCTTGGAAAAGAATTTGGCAGTTATCACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457745.1
CDS CCA 72 bp TCTATCAATGTCATCTGCCAATCCTGCTTGGTATATTaGATCTGCAAAGGAGACACGGCGAACCTTATTAAC +
Preference number: 6 (lower is better)
Translates to: SINVICQSCLVY*ICKGDTANLIN
Trigger: GTTAATAAGGTTCGCCGTGTCTCCTTTGCAGATCCAATATACCAAGCAGGATTGGCAGATGACATTGATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS CAA 72 bp CTACGAAATCCAAGTTCTTCTAGTTGCAAGAGAGAATaGATGAAACTCCCACTTCGATGCAAGGTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: LRNPSSSSCKRE*MKLPLRCKVLP
Trigger: TGGAAGGACCTTGCATCGAAGTGGGAGTTTCATCAATTCTCTCTTGCAACTAGAAGAACTTGGATTTCGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 90 bp TTATCTTGGAAGAAAGTTCCTCACAGCACAAGTTCTCTTCTGCTGTaGCCACCAAAGCAGCACAACGAGCAAATGCTCTATATAATTCTG +
Preference number: 6 (lower is better)
Translates to: LSWKKVPHSTSSLLL*PPKQHNEQMLYIIL
Trigger: CAGAATTATATAGAGCATTTGCTCGTTGTGCTGCTTTGGTGGCAACAGCAGAAGAGAACTTGTGCTGTGAGGAACTTTCTTCCAAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS TCA 72 bp TGCAGTCAACATGTTTGTTTCAGCTTCATCAGGCTTTaGGGTTTTGGTAGTTATGCCCTCATTCTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: CSQHVCFSFIRL*GFGSYALILCF
Trigger: GAAACAGAGAATGAGGGCATAACTACCAAAACCTCAAAGCCTGATGAAGCTGAAACAAACATGTTGACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS TCA 72 bp ATTTTCTGCCTCCCTTTGATAATTTACAATGACCTATaGGTTGCACTCAAAGCCTCTGTCACCAGAAACAGC +
Preference number: 6 (lower is better)
Translates to: IFCLPLIIYNDL*VALKASVTRNS
Trigger: GCTGTTTCTGGTGACAGAGGCTTTGAGTGCAACTCATAGGTCATTGTAAATTATCAAAGGGAGGCAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467762.2
CDS CCA 72 bp ACATTTCAAGTCCCAAAAGTTGAATGGATGGGATTGTaGCCATTCCACCTAAATTCGAACTCAGGTTCATTC +
Preference number: 6 (lower is better)
Translates to: TFQVPKVEWMGL*PFHLNSNSGSF
Trigger: GAATGAACCTGAGTTCGAATTTAGGTGGAATGGCCACAATCCCATCCATTCAACTTTTGGGACTTGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CCA 72 bp CTTCAGGATAAACCAACATCATCACTTTGGCAAAAGTaGCATTCCAGAACTGAGCACTCTGTTTTCGAATCT +
Preference number: 6 (lower is better)
Translates to: LQDKPTSSLWQK*HSRTEHSVFES
Trigger: AGATTCGAAAACAGAGTGCTCAGTTCTGGAATGCCACTTTTGCCAAAGTGATGATGTTGGTTTATCCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 72 bp TACAAATTATTGTGCAGACCTATGTCTTCATTCTTCTaGGGTATACACCTAGGAGTGGAATTTGCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: YKLLCRPMSSFF*GIHLGVEFAGP
Trigger: TGGCCCAGCAAATTCCACTCCTAGGTGTATACCCAAGAAGAATGAAGACATAGGTCTGCACAATAATTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457745.1
CDS CAA 90 bp GATGAGGTCCAAGTCTCATCAGTAAATACCACCAGACTTCTAGTTTaGTTAATGCTAGAGTTTCTGTTCTCACATGGATGGAACTCAAAG +
Preference number: 6 (lower is better)
Translates to: DEVQVSSVNTTRLLV*LMLEFLFSHGWNSK
Trigger: CTTTGAGTTCCATCCATGTGAGAACAGAAACTCTAGCATTAACAAAACTAGAAGTCTGGTGGTATTTACTGATGAGACTTGGACCTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 90 bp AACAACAAATTAGAAAAGCCTTCATCTTCCAAACTGGACATTATCTaGGAAGAAAGTTCCTCACAGCACAAGTTCTCTTCTGCTGTTGCC +
Preference number: 6 (lower is better)
Translates to: NNKLEKPSSSKLDII*EESSSQHKFSSAVA
Trigger: GGCAACAGCAGAAGAGAACTTGTGCTGTGAGGAACTTTCTTCCAAGATAATGTCCAGTTTGGAAGATGAAGGCTTTTCTAATTTGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 90 bp ATGATTCCTTCTTCAGTGCTCATTTCAACTGTGTCACAAACAAAGTaGTCCATTTCTGCAGTCAACATGTTTGTTTCAGCTTCATCAGGC +
Preference number: 6 (lower is better)
Translates to: MIPSSVLISTVSQTK*SISAVNMFVSASSG
Trigger: GCCTGATGAAGCTGAAACAAACATGTTGACTGCAGAAATGGACAACTTTGTTTGTGACACAGTTGAAATGAGCACTGAAGAAGGAATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS TCA 72 bp TGGAGATGTAGCTACATGACACGAATTGCCCTGAGGTaGGGCATTAGAATCAATGCTTATTGTACTTTGAAT +
Preference number: 6 (lower is better)
Translates to: WRCSYMTRIALR*GIRINAYCTLN
Trigger: ATTCAAAGTACAATAAGCATTGATTCTAATGCCTCACCTCAGGGCAATTCGTGTCATGTAGCTACATCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS TCA 72 bp AACATCATCACTTTGGCAAAAGTGGCATTCCAGAACTaGGCACTCTGTTTTCGAATCTGTTTATTCTTGTGC +
Preference number: 6 (lower is better)
Translates to: NIITLAKVAFQN*ALCFRICLFLC
Trigger: GCACAAGAATAAACAGATTCGAAAACAGAGTGCTCAGTTCTGGAATGCCACTTTTGCCAAAGTGATGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS TCA 72 bp TTGCAATATTTTCTGCCTCCCTTTGATAATTTACAATaGCCTATGAGTTGCACTCAAAGCCTCTGTCACCAG +
Preference number: 6 (lower is better)
Translates to: LQYFLPPFDNLQ*PMSCTQSLCHQ
Trigger: CTGGTGACAGAGGCTTTGAGTGCAACTCATAGGTCATTGTAAATTATCAAAGGGAGGCAGAAAATATTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467762.2
CDS TCA 72 bp GTTTCCAAGAATGACACTGAGGGGAGATACCGAGGTTaGGGATTTATCATGATGTGTTACTATGTTTCTCAT +
Preference number: 6 (lower is better)
Translates to: VSKNDTEGRYRG*GFIMMCYYVSH
Trigger: ATGAGAAACATAGTAACACATCATGATAAATCCTCAACCTCGGTATCTCCCCTCAGTGTCATTCTTGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484077.1
CDS GCA 72 bp ATTCTCTGTTTCACCATCATGGCCAGTTTCAGCCATTaGCTCGCCGATCATCATTTCTTCATTATTTTTCAT +
Preference number: 6 (lower is better)
Translates to: ILCFTIMASFSH*LADHHFFIIFH
Trigger: ATGAAAAATAATGAAGAAATGATGATCGGCGAGGCAATGGCTGAAACTGGCCATGATGGTGAAACAGAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS CCA 72 bp AGAAATGAAGCAACATTTCAAGTCCCAAAAGTTGAATaGATGGGATTGTGGCCATTCCACCTAAATTCGAAC +
Preference number: 6 (lower is better)
Translates to: RNEATFQVPKVE*MGLWPFHLNSN
Trigger: GTTCGAATTTAGGTGGAATGGCCACAATCCCATCCATTCAACTTTTGGGACTTGAAATGTTGCTTCATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 72 bp AAAGAAGTCAATTTCCCTAGGGGCTCATTCTTCTTTTaGGACCAATCTGAAGGTCTCTGTGGTGATTTAACT +
Preference number: 6 (lower is better)
Translates to: KEVNFPRGSFFF*DQSEGLCGDLT
Trigger: AGTTAAATCACCACAGAGACCTTCAGATTGGTCCAAAAAGAAGAATGAGCCCCTAGGGAAATTGACTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 72 bp TCATCAGTTGGTGGGCATTTAAGTTGTTTCCACTTTTaGGCTATTATGAGTAATGCTGCTACGGACATGGAT +
Preference number: 6 (lower is better)
Translates to: SSVGGHLSCFHF*AIMSNAATDMD
Trigger: ATCCATGTCCGTAGCAGCATTACTCATAATAGCCAAAAAGTGGAAACAACTTAAATGCCCACCAACTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457745.1
CDS TCA 72 bp CACTGTGATGGTTCCTCCACTTTCTGTGAAGTATGGTaGTCTTCCTGTAAAATATCACTTTCCATTACCATT +
Preference number: 6 (lower is better)
Translates to: HCDGSSTFCEVW*SSCKISLSITI
Trigger: AATGGTAATGGAAAGTGATATTTTACAGGAAGATCACCATACTTCACAGAAAGTGGAGGAACCATCACAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS GCA 72 bp CATTTCAACTGTGTCACAAACAAAGTTGTCCATTTCTaGAGTCAACATGTTTGTTTCAGCTTCATCAGGCTT +
Preference number: 6 (lower is better)
Translates to: HFNCVTNKVVHF*SQHVCFSFIRL
Trigger: AAGCCTGATGAAGCTGAAACAAACATGTTGACTGCAGAAATGGACAACTTTGTTTGTGACACAGTTGAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS CCA 72 bp GGTAAACACTTTCTGTTGGGCATGGTATGGATTCTTTaGCCATTTCTGAAATTAAACACTTCTTTGAGCTCT +
Preference number: 6 (lower is better)
Translates to: GKHFLLGMVWIL*PFLKLNTSLSS
Trigger: AGAGCTCAAAGAAGTGTTTAATTTCAGAAATGGCCAAAGAATCCATACCATGCCCAACAGAAAGTGTTTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243326.9
ENST00000444746.7
ENST00000454583.6
CDS CAA 72 bp CAAGTCTCATCAGTAAATACCACCAGACTTCTAGTTTaGTTAATGCTAGAGTTTCTGTTCTCACATGGATGG +
Preference number: 6 (lower is better)
Translates to: QVSSVNTTRLLV*LMLEFLFSHGW
Trigger: CCATCCATGTGAGAACAGAAACTCTAGCATTAACAAAACTAGAAGTCTGGTGGTATTTACTGATGAGACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 72 bp TTAGAAAAGCCTTCATCTTCCAAACTGGACATTATCTaGGAAGAAAGTTCCTCACAGCACAAGTTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: LEKPSSSKLDII*EESSSQHKFSS
Trigger: AGAAGAGAACTTGTGCTGTGAGGAACTTTCTTCCAAGATAATGTCCAGTTTGGAAGATGAAGGCTTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 90 bp CTTATGCATTCATCAGTTGGTGGGCATTTAAGTTGTTTCCACTTTTaGGCTATTATGAGTAATGCTGCTACGGACATGGATGTACAAATT +
Preference number: 6 (lower is better)
Translates to: LMHSSVGGHLSCFHF*AIMSNAATDMDVQI
Trigger: AATTTGTACATCCATGTCCGTAGCAGCATTACTCATAATAGCCAAAAAGTGGAAACAACTTAAATGCCCACCAACTGATGAATGCATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457745.1
CDS TCA 72 bp GCTGACACAAGTGAAGGATCAAGTTCCCTTAGTTTTTaGGGAGATGCATTATTGTCTTCTATTATTAGCTCA +
Preference number: 6 (lower is better)
Translates to: ADTSEGSSSLSF*GDALLSSIISS
Trigger: TGAGCTAATAATAGAAGACAATAATGCATCTCCTCAAAAACTAAGGGAACTTGATCCTTCACTTGTGTCAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS CAA 72 bp CTCACATGGATGGAACTCAAAGGCTGCATTAACAACTaGAGTCTTTTTGCACTACATAGTATATCTGGATTT +
Preference number: 6 (lower is better)
Translates to: LTWMELKGCINN*SLFALHSISGF
Trigger: AAATCCAGATATACTATGTAGTGCAAAAAGACTCAAGTTGTTAATGCAGCCTTTGAGTTCCATCCATGTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 72 bp TCATCATTATTACTGTTTGACATTTCTGGACTGGTTTaGTCAAGAGAACCACACTCATTATTCGAAAGGGAG +
Preference number: 6 (lower is better)
Translates to: SSLLLFDISGLV*SREPHSLFERE
Trigger: CTCCCTTTCGAATAATGAGTGTGGTTCTCTTGACAAAACCAGTCCAGAAATGTCAAACAGTAATAATGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 72 bp CTAATATCTGAATTAAATTCCTCAGTTGCTACTTCTTaGGCATTCAGTTTAGCTGTGTCTGCTTCAGAGTCA +
Preference number: 6 (lower is better)
Translates to: LISELNSSVATS*AFSLAVSASES
Trigger: TGACTCTGAAGCAGACACAGCTAAACTGAATGCCAAAGAAGTAGCAACTGAGGAATTTAATTCAGATATTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS CAA 90 bp TTCTTGTTACTACCCAATAATAGATCTGTATGGATATACCAGATCTaGCTTATGCATTCATCAGTTGGTGGGCATTTAAGTTGTTTCCAC +
Preference number: 6 (lower is better)
Translates to: FLLLPNNRSVWIYQI*LMHSSVGGHLSCFH
Trigger: GTGGAAACAACTTAAATGCCCACCAACTGATGAATGCATAAGCAAGATCTGGTATATCCATACAGATCTATTATTGGGTAGTAACAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457745.1
CDS CAA 90 bp GTTTCTGTTCTCACATGGATGGAACTCAAAGGCTGCATTAACAACTaGAGTCTTTTTGCACTACATAGTATATCTGGATTTAAAGCAAAA +
Preference number: 6 (lower is better)
Translates to: VSVLTWMELKGCINN*SLFALHSISGFKAK
Trigger: TTTTGCTTTAAATCCAGATATACTATGTAGTGCAAAAAGACTCAAGTTGTTAATGCAGCCTTTGAGTTCCATCCATGTGAGAACAGAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS CAA 90 bp TCAGAAAGACTAATATCTGAATTAAATTCCTCAGTTGCTACTTCTTaGGCATTCAGTTTAGCTGTGTCTGCTTCAGAGTCATCATTTCTT +
Preference number: 6 (lower is better)
Translates to: SERLISELNSSVATS*AFSLAVSASESSFL
Trigger: AAGAAATGATGACTCTGAAGCAGACACAGCTAAACTGAATGCCAAAGAAGTAGCAACTGAGGAATTTAATTCAGATATTAGTCTTTCTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS CAA 90 bp TGTTGTATCATGTGTCAGTACTTCATTCTTGTTACTACCCCATTCTaGTTACTACCCAATAATAGATCTGTATGGATATACCAGATCTTG +
Preference number: 6 (lower is better)
Translates to: CCIMCQYFILVTTPF*LLPNNRSVWIYQIL
Trigger: CAAGATCTGGTATATCCATACAGATCTATTATTGGGTAGTAACAAGAATGGGGTAGTAACAAGAATGAAGTACTGACACATGATACAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457745.1
CDS TCA 72 bp TCACATGGATGGAACTCAAAGGCTGCATTAACAACTTaGGTCTTTTTGCACTACATAGTATATCTGGATTTA +
Preference number: 6 (lower is better)
Translates to: SHGWNSKAALTT*VFLHYIVYLDL
Trigger: TAAATCCAGATATACTATGTAGTGCAAAAAGACTCAAGTTGTTAATGCAGCCTTTGAGTTCCATCCATGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000414861.6
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
CDS TCA 72 bp TCTTCAGAAATACCAGTTTTGGTTCTCTCTTGTCCATaGAAGCTAGCTTCATTTCCTACATTCAATTCCATA +
Preference number: 6 (lower is better)
Translates to: SSEIPVLVLSCP*KLASFPTFNSI
Trigger: TATGGAATTGAATGTAGGAAATGAAGCTAGCTTTCATGGACAAGAGAGAACCAAAACTGGTATTTCTGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000243326.9
ENST00000428287.6
ENST00000430328.6
ENST00000444746.7
ENST00000453091.6
ENST00000454583.6
CDS TCA 72 bp ATCAAACTCACAGCCAGTAGCTCTATAAATCATGCCTaGACAAAGTTTATTTTCACCATTGGGTATATCACA +
Preference number: 6 (lower is better)
Translates to: IKLTASSSINHA*TKFIFTIGYIT
Trigger: TGTGATATACCCAATGGTGAAAATAAACTTTGTTCAGGCATGATTTATAGAGCTACTGGCTGTGAGTTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498041.1
CDS CCA 72 bp ACCCCATTCTTGTTACTACCCAATAATAGATCTGTATaGATATACCAGATCTTGCTTATGCATTCATCAGTT +
Preference number: 6 (lower is better)
Translates to: TPFLLLPNNRSV*IYQILLMHSSV
Trigger: AACTGATGAATGCATAAGCAAGATCTGGTATATCCATACAGATCTATTATTGGGTAGTAACAAGAATGGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457745.1
CDS TCA 72 bp TATAAGAGCCAAAAACCTTATTCCTTAATGATAAGCTaGATGTTGTATGAAACTAAAGCAAGAGGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: YKSQKPYSLMIS*MLYETKARGRA
Trigger: TGCTCTGCCTCTTGCTTTAGTTTCATACAACATTCAGCTTATCATTAAGGAATAAGGTTTTTGGCTCTTATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484077.1