RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RICTOR (Homo sapiens)

Ensembl gene IDs: ENSG00000164327

Ensembl transcript IDs: ENST00000296782.9, ENST00000357387.8, ENST00000510711.5, ENST00000511516.5, ENST00000513566.1, ENST00000514735.1, ENST00000515846.1

Found 646 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTaGCACTGGACACCATGGACCGCACTGAGGAAGATCGTTGCAGGG +
Preference number: 1 (lower is better)
Translates to: PPGEQDQCNHLNPHM*HWTPWTALRKIVAG
Trigger: CCCTGCAACGATCTTCCTCAGTGCGGTCCATGGTGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CCA 90 bp GGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTaGACACCATGGACCGCACTGAGGAAGATCGTTGCAGGGTATTTT +
Preference number: 1 (lower is better)
Translates to: GEQDQCNHLNPHMWH*TPWTALRKIVAGYF
Trigger: AAAATACCCTGCAACGATCTTCCTCAGTGCGGTCCATGGTGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR TCA 90 bp ACGATGAGGAAGAATAGTTTTTGCCTCAGCTGCCACAAAGCCATCTaGAAGCCTCCAACTGTCTTGGAACCTCCCTGGATCTACACTGAG +
Preference number: 1 (lower is better)
Translates to: TMRKNSFCLSCHKAI*KPPTVLEPPWIYTE
Trigger: CTCAGTGTAGATCCAGGGAGGTTCCAAGACAGTTGGAGGCTTTCAGATGGCTTTGTGGCAGCTGAGGCAAAAACTATTCTTCCTCATCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR TCA 90 bp ACTGGCCACAGATGTTTGCGACTATGCCTCACAGCATCCCAGTTGTaGCATTTTAGAATATCACAGCCTTGTTTGGTTTTAGCTATGAGC +
Preference number: 1 (lower is better)
Translates to: TGHRCLRLCLTASQL*HFRISQPCLVLAMS
Trigger: GCTCATAGCTAAAACCAAACAAGGCTGTGATATTCTAAAATGTCACAACTGGGATGCTGTGAGGCATAGTCGCAAACATCTGTGGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR GCA 90 bp TACAGAGTTGTTCCACATCATCTGGAACCACTGGCCACAGATGTTTaGGACTATGCCTCACAGCATCCCAGTTGTGACATTTTAGAATAT +
Preference number: 1 (lower is better)
Translates to: YRVVPHHLEPLATDV*DYASQHPSCDILEY
Trigger: ATATTCTAAAATGTCACAACTGGGATGCTGTGAGGCATAGTCGCAAACATCTGTGGCCAGTGGTTCCAGATGATGTGGAACAACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR TCA 90 bp CCCGGGTTGTTGAGGCTCTTCTTCTGCTTTGAGGTTATAAACCTCTaGAGTAGTGTTACAAACATTAAGAAAAACGTGAAAGGGCCAAAG +
Preference number: 1 (lower is better)
Translates to: PGLLRLFFCFEVINL*SSVTNIKKNVKGPK
Trigger: CTTTGGCCCTTTCACGTTTTTCTTAATGTTTGTAACACTACTTCAGAGGTTTATAACCTCAAAGCAGAAGAAGAGCCTCAACAACCCGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR TCA 90 bp TCAGTAAATAGCACATCTTTTGCTGGAGATGCCAAAGCTTCAGAGTaGGATAAGGATGGATGCATTCTTTGTTGCTGTAGTCTTTTCAGT +
Preference number: 1 (lower is better)
Translates to: SVNSTSFAGDAKASE*DKDGCILCCCSLFS
Trigger: ACTGAAAAGACTACAGCAACAAAGAATGCATCCATCCTTATCTCACTCTGAAGCTTTGGCATCTCCAGCAAAAGATGTGCTATTTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR GCA 90 bp GAATATCTTGAAAGTCTGAATGACTACATATTGCACTCAGTTGGTTaGTGGGCTGGAAACCCAGAATTTCAATACAGACACAATAAAGGC +
Preference number: 1 (lower is better)
Translates to: EYLESLNDYILHSVG*WAGNPEFQYRHNKG
Trigger: GCCTTTATTGTGTCTGTATTGAAATTCTGGGTTTCCAGCCCAGCAACCAACTGAGTGCAATATGTAGTCATTCAGACTTTCAAGATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR GCA 90 bp ACGAACATAGTTATCACCATCAACAGGCTTCCGGTAAGTAGTAAGTaGTTCATTGAGTTGTTCCTCAATCAAGTCAACATATTTGGAGTT +
Preference number: 1 (lower is better)
Translates to: TNIVITINRLPVSSK*FIELFLNQVNIFGV
Trigger: AACTCCAAATATGTTGACTTGATTGAGGAACAACTCAATGAAGCACTTACTACTTACCGGAAGCCTGTTGATGGTGATAACTATGTTCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR TCA 90 bp GAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGTGAGATaGAATGCTTCATCCCAACTGGAACTTTCAGTTCCAGTAAATAAA +
Preference number: 1 (lower is better)
Translates to: EQFTEVQSKRCYEVR*NASSQLELSVPVNK
Trigger: TTTATTTACTGGAACTGAAAGTTCCAGTTGGGATGAAGCATTTCATCTCACTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR CCA 90 bp CTCATTGAACTTATGCCACTTGTTGTAGTGTCTGTATTGAAACTTTaGCTACGTATCTTCATATGTGAGCTCGTTGAACTTTCTACTACT +
Preference number: 1 (lower is better)
Translates to: LIELMPLVVVSVLKL*LRIFICELVELSTT
Trigger: AGTAGTAGAAAGTTCAACGAGCTCACATATGAAGATACGTAGCCAAAGTTTCAATACAGACACTACAACAAGTGGCATAAGTTCAATGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR TCA 90 bp CATTATTTTGAAGACTTCTTTCGGGTTTCATTCCAGATGAAGCATTaGGCCACTGAACAATATCCTTTACTAGATCTTCTAAGTAGCCTT +
Preference number: 1 (lower is better)
Translates to: HYFEDFFRVSFQMKH*ATEQYPLLDLLSSL
Trigger: AAGGCTACTTAGAAGATCTAGTAAAGGATATTGTTCAGTGGCTCAATGCTTCATCTGGAATGAAACCCGAAAGAAGTCTTCAAAATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CCA 90 bp CGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTATTAGAGACTaGATCCCAGAATTTCCAGGTTTACATAAATTAATAATACCTGCC +
Preference number: 1 (lower is better)
Translates to: RLISIFGMQSTPIRD*IPEFPGLHKLIIPA
Trigger: GGCAGGTATTATTAATTTATGTAAACCTGGAAATTCTGGGATCCAGTCTCTAATAGGAGTACTTTGCATACCAAATATGGAAATAAGGCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR TCA 90 bp ATGGTCCCTATAAGATTCCAATTCCATTCAAGATTCTCTTTATGTTaGAGGACTTGGCTATCTCTAAGGTTAATTAAAAGAGCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: MVPIRFQFHSRFSLC*RTWLSLRLIKRASS
Trigger: AGAGGAAGCTCTTTTAATTAACCTTAGAGATAGCCAAGTCCTTCAACATAAAGAGAATCTTGAATGGAATTGGAATCTTATAGGGACCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGAATACACAGGTCCCTCTaGTGGAAAGAACTTCACACT +
Preference number: 2 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRIHRSL*WKELHT
Trigger: AGTGTGAAGTTCTTTCCATCAGAGGGACCTGTGTAT...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGTGCCACAAAGCCATCTaGAAGCCTCCAACTGTCTTG +
Preference number: 2 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGECHKAI*KPPTVL
Trigger: CAAGACAGTTGGAGGCTTTCAGATGGCTTTGTGGCA...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGAGTTCAAGGCTGCACTaGCTCGCAGTCTCTTTTCCT +
Preference number: 2 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGESSRLH*LAVSFP
Trigger: AGGAAAAGAGACTGCGAGCCAGTGCAGCCTTGAACT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGATGTTATGAAGTGAGATaGAATGCTTCATCCCAACTG +
Preference number: 2 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRCYEVR*NASSQL
Trigger: CAGTTGGGATGAAGCATTTCATCTCACTTCATAACA...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGAGATGGTAGCTCTAACTaGGATATGATCATCACTGTT +
Preference number: 2 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRDGSSN*DMIITV
Trigger: AACAGTGATGATCATATCTCAGTTAGAGCTACCATC...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp CCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTGGACAGGCCTTGTCTTCACATaGTTCATCGAGGATATCAAG +
Preference number: 2 (lower is better)
Translates to: PGEQDQCNHLNPHMWHWTGLVFT*FIEDIK
Trigger: CTTGATATCCTCGATGAAGCATGTGAAGACAAGGCC...TGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp CCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTGGACATTACCACAGTACTCATaGTTCCACAGTCTGTGTCCA +
Preference number: 2 (lower is better)
Translates to: PGEQDQCNHLNPHMWHWTLPQYS*FHSLCP
Trigger: TGGACACAGACTGTGGAAGCATGAGTACTGTGGTAA...TGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CCA 90 bp GTGTCCATAGTTGTAGCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTATCCATGAGGTCTaGCCTGGATCTGGCACGATG +
Preference number: 2 (lower is better)
Translates to: VSIVVASTPTVSREGLELIIHEV*PGSGTM
Trigger: CATCGTGCCAGATCCAGGCCAGACCTCATGGATAAT...GAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGCTACAACTATGGACAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp GTGTCCATAGTTGTAGCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCGACCAAAGACCACGATaGCAGGCAACGTTCTTAGAA +
Preference number: 2 (lower is better)
Translates to: VSIVVASTPTVSREGLELDQRPR*QATFLE
Trigger: TTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTC...GAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGCTACAACTATGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGCTTCCTGTAGCAAATTaGGACCCCAATTTGATGAGC +
Preference number: 2 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGELPVAN*DPNLMS
Trigger: GCTCATCAAATTGGGGTCTCAATTTGCTACAGGAAG...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCACTGGCCACAGATGTTTaGGACTATGCCTCACAGCAT +
Preference number: 2 (lower is better)
Translates to: ASTPTVSREGLELIELMPLATDV*DYASQH
Trigger: ATGCTGTGAGGCATAGTCGCAAACATCTGTGGCCAG...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CCA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGAAAAATCCTTTTGGAATaGAGAGAAATCTCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRKILLE*REISAG
Trigger: TCCTGCTGAGATTTCTCTCCATTCCAAAAGGATTTT...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCACTGGATCTGGCACGATaGGGAAGAATAGTTTTTGCC +
Preference number: 2 (lower is better)
Translates to: ASTPTVSREGLELIELMPLDLAR*GRIVFA
Trigger: GGCAAAAACTATTCTTCCTCATCGTGCCAGATCCAG...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGAGATACTCCTGTCTTTaGTGCCTAGTCAGTCGTATT +
Preference number: 2 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGERYSCL*CLVSRI
Trigger: AATACGACTGACTAGGCAGCAAAGACAGGAGTATCT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGTCATGTACCAGTAACTaGGGAACAGTGTACAGAAGA +
Preference number: 2 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGESCTSN*GTVYRR
Trigger: TCTTCTGTACACTGTTCCGCAGTTACTGGTACATGA...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGACTCCTATTAGAGACTaGATCCCAGAATTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGETPIRD*IPEFPG
Trigger: ACCTGGAAATTCTGGGATCCAGTCTCTAATAGGAGT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CAA 90 bp AGAAATTCTGTAAACTGGCAACCTACAACCGTGAGCTGTTTGGCCTaGGCAAAATCCAGATCCAGGTTGGCATATAATTTACTGCTGGGC +
Preference number: 2 (lower is better)
Translates to: RNSVNWQPTTVSCLA*AKSRSRLAYNLLLG
Trigger: GCCCAGCAGTAAATTATATGCCAACCTGGATCTGGATTTTGCCAAGGCCAAACAGCTCACGGTTGTAGGTTGCCAGTTTACAGAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp GTGTCCATAGTTGTAGCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCGCTCTTCTTCTGCTTTaGGGTTATAAACCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: VSIVVASTPTVSREGLELALLLL*GYKPLK
Trigger: CTTCAGAGGTTTATAACCTCAAAGCAGAAGAAGAGC...GAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGCTACAACTATGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGGTCAAAGAGGTGTTATaGAGTGAGATGAAATGCTTC +
Preference number: 2 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEVKEVL*SEMKCF
Trigger: GAAGCATTTCATCTCACTTCATAACACCTCTTTGAC...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR TCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGATAAGAACAATTCACTaGAGTGCAGTCAAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEIRTIH*SAVKEV
Trigger: CACCTCTTTGACTGCACTTCAGTGAATTGTTCTTAT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR TCA 90 bp AGCATGAAGATTGGCCTTGTCTTCACATGCTTCATCGAGGATATCAAGAGCTTCCCAAATAATTATCCATaGGGTCTGGCCTGGATCTGG +
Preference number: 2 (lower is better)
Translates to: SMKIGLVFTCFIEDIKSFPNNYP*GLAWIW
Trigger: CCAGATCCAGGCCAGACCTCATGGATAATTATTTGG...GAAGCTCTTGATATCCTCGATGAAGCATGTGAAGACAAGGCCAATCTTCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGATTGTGGTAATAGGATaGAGCCTTAGAGACACTGAT +
Preference number: 2 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEIVVIG*SLRDTD
Trigger: ATCAGTGTCTCTAAGGCTGCATCCTATTACCACAAT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGTTGAGGCTCTTCTTCTaGTTTGAGGTTATAAACCTC +
Preference number: 2 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGELRLFF*FEVINL
Trigger: GAGGTTTATAACCTCAAAGCAGAAGAAGAGCCTCAA...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp CCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTGGACATGCAGAGAGTATCAGTaGCAAATAATTATCCATGAG +
Preference number: 2 (lower is better)
Translates to: PGEQDQCNHLNPHMWHWTCREYQ*QIIIHE
Trigger: CTCATGGATAATTATTTGGCACTGATACTCTCTGCA...TGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGAGTAACTCTGACATTTaGTTCTCTGGAAAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGESNSDI*FSGKAV
Trigger: AACTGCCTTTCCAGAGAACCAAATGTCAGAGTTACT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR TCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCAACATTAAGAAAAACGTaGAAGGGCCAAAGTTCCCTC +
Preference number: 2 (lower is better)
Translates to: ASTPTVSREGLELIELMPTLRKT*KGQSSL
Trigger: GAGGGAACTTTGGCCCTTTCACGTTTTTCTTAATGT...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGCTCTTCTTCTGCTTTaGGGTTATAAACCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVALLLL*GYKPLK
Trigger: CTTCAGAGGTTTATAACCTCAAAGCAGAAGAAGAGC...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR TCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGCTTCTAGGAAGCGTATaGGAAGAACCTGGAGGCACC +
Preference number: 2 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMLLGSV*EEPGGT
Trigger: GGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAG...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGTACTCCTGTCTTTGCTaGCTAGTCAGTCGTATTTTC +
Preference number: 2 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVYSCLC*LVSRIF
Trigger: GAAAATACGACTGACTAGGCAGCAAAGACAGGAGTA...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCATGTGAAGGGTGCTTCTaGATATCCCATTATTGTTCC +
Preference number: 2 (lower is better)
Translates to: ASTPTVSREGLELIELMPCEGCF*ISHYCS
Trigger: GGAACAATAATGGGATATGCAGAAGCACCCTTCACA...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp GTGTCCATAGTTGTAGCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGTGGTAATAGGATaGAGCCTTAGAGACACTGAT +
Preference number: 2 (lower is better)
Translates to: VSIVVASTPTVSREGLELIVVIG*SLRDTD
Trigger: ATCAGTGTCTCTAAGGCTGCATCCTATTACCACAAT...GAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGCTACAACTATGGACAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCAAGAAATTCTGTAAACTaGCAACCTACAACCGTGAGC +
Preference number: 2 (lower is better)
Translates to: ASTPTVSREGLELIELMPRNSVN*QPTTVS
Trigger: GCTCACGGTTGTAGGTTGCCAGTTTACAGAATTTCT...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGAATAATACCTGCCCATaGTCGGAATGTTGCTATGAT +
Preference number: 2 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVNNTCP*SECCYD
Trigger: ATCATAGCAACATTCCGATCATGGGCAGGTATTATT...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAGGCAACCTACAACCGTaGGCTGTTTGGCCTTGGCAA +
Preference number: 2 (lower is better)
Translates to: KAINILINPPTTAFSLCKGNLQP*AVWPWQ
Trigger: TTGCCAAGGCCAAACAGCTCACGGTTGTAGGTTGCC...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACTCATGTACCAGTAACTaGGGAACAGTGTACAGAAGA +
Preference number: 2 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHSCTSN*GTVYRR
Trigger: TCTTCTGTACACTGTTCCGCAGTTACTGGTACATGA...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATATGTGAAGGGTGCTTCTaGATATCCCATTATTGTTCC +
Preference number: 2 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVICEGCF*ISHYCS
Trigger: GGAACAATAATGGGATATGCAGAAGCACCCTTCACA...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGCCTGTAATAACACATTaGAACAAAATGAAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEPVITH*NKMKSW
Trigger: CCAACTCTTCATTTTGTTGCAATGTGTTATTACAGG...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGAACAAACAAAAACCTTaGCCTCATCAACTTAACTTC +
Preference number: 2 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGENKQKP*PHQLNF
Trigger: GAAGTTAAGTTGATGAGGGCAAGGTTTTTGTTTGTT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR CAA 90 bp TCAAGAAGAAATTCTGTAAACTGGCAACCTACAACCGTGAGCTGTTaGGCCTTGGCAAAATCCAGATCCAGGTTGGCATATAATTTACTG +
Preference number: 2 (lower is better)
Translates to: SRRNSVNWQPTTVSC*ALAKSRSRLAYNLL
Trigger: CAGTAAATTATATGCCAACCTGGATCTGGATTTTGCCAAGGCCAAACAGCTCACGGTTGTAGGTTGCCAGTTTACAGAATTTCTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTAGAGGTGTTATGAAGTaGGATGAAATGCTTCATCCC +
Preference number: 2 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSRGVMK*DEMLHP
Trigger: GGGATGAAGCATTTCATCTCACTTCATAACACCTCT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR TCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGCTTCTCTGTCTTCTTTaGGCTGTCCTTCAGCTGTAT +
Preference number: 2 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKLLCLL*AVLQLY
Trigger: ATACAGCTGAAGGACAGCTCAAAGAAGACAGAGAAG...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGAGATTCTCTTTATGTTaGAGGACTTGGCTATCTCTA +
Preference number: 2 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVRFSLC*RTWLSL
Trigger: TAGAGATAGCCAAGTCCTTCAACATAAAGAGAATCT...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTTACTCCTGTCTTTGCTaGCTAGTCAGTCGTATTTTC +
Preference number: 2 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSYSCLC*LVSRIF
Trigger: GAAAATACGACTGACTAGGCAGCAAAGACAGGAGTA...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTTCATGTACCAGTAACTaGGGAACAGTGTACAGAAGA +
Preference number: 2 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSSCTSN*GTVYRR
Trigger: TCTTCTGTACACTGTTCCGCAGTTACTGGTACATGA...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCAATAACTTGTGAAGGGTaGTTCTGCATATCCCATTAT +
Preference number: 2 (lower is better)
Translates to: ASTPTVSREGLELIELMPITCEG*FCISHY
Trigger: ATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGAGATGTTTGCGACTATaGCTCACAGCATCCCAGTTG +
Preference number: 2 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMRCLRL*LTASQL
Trigger: CAACTGGGATGCTGTGAGGCATAGTCGCAAACATCT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCACCAGTGTCTTCAATGTaGTTATTCCCCATAAATGAA +
Preference number: 2 (lower is better)
Translates to: ASTPTVSREGLELIELMPPVSSM*LFPINE
Trigger: TTCATTTATGGGGAATAAGCACATTGAAGACACTGG...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGAGAAGGAAGTTGTTTTaGTTAGGAAAGTCAGCAGTT +
Preference number: 2 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVRRKLF*LGKSAV
Trigger: AACTGCTGACTTTCCTAACCAAAACAACTTCCTTCT...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGGCAGTCTCTTTTCCTTaGGGATATCAAAGGATGCAG +
Preference number: 2 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKAVSFP*GYQRMQ
Trigger: CTGCATCCTTTGATATCCCCAAGGAAAAGAGACTGC...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CAA 90 bp ATCACCATCAACAGGCTTCCGGTAAGTAGTAAGTGCTTCATTGAGTaGTTCCTCAATCAAGTCAACATATTTGGAGTTGTATTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: ITINRLPVSSKCFIE*FLNQVNIFGVVFPV
Trigger: CACAGGGAATACAACTCCAAATATGTTGACTTGATTGAGGAACAACTCAATGAAGCACTTACTACTTACCGGAAGCCTGTTGATGGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTTTCAGAAATAACTTGTaGAGGGTGCTTCTGCATATC +
Preference number: 2 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSFRNNL*RVLLHI
Trigger: GATATGCAGAAGCACCCTTCACAAGTTATTTCTGAA...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR TCA 90 bp CTCTTCAGATTCAAGAAGAAATTCTGTAAACTGGCAACCTACAACCGTGAGCTGTTCAGAAATAACTTGTaGAGGGTGCTTCTGCATATC +
Preference number: 2 (lower is better)
Translates to: LFRFKKKFCKLATYNRELFRNNL*RVLLHI
Trigger: GATATGCAGAAGCACCCTTCACAAGTTATTTCTGAA...CAGCTCACGGTTGTAGGTTGCCAGTTTACAGAATTTCTTCTTGAATCTGAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTATAAGAACAATTCACTaGAGTGCAGTCAAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSIRTIH*SAVKEV
Trigger: CACCTCTTTGACTGCACTTCAGTGAATTGTTCTTAT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR TCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGTCAATGTCTGTTCAGTaGCCTACAAACACCAGAACC +
Preference number: 2 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMSMSVQ*PTNTRT
Trigger: GGTTCTGGTGTTTGTAGGTCACTGAACAGACATTGA...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
3UTR-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTGAAGCATTGAGCCACTaGACAATATCCTTTACTAGA +
Preference number: 2 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSEALSH*TISFTR
Trigger: TCTAGTAAAGGATATTGTTCAGTGGCTCAATGCTTC...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGACCAATGTAATCATCTaGACCCCCATATGTGGCACT +
Preference number: 2 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMTNVII*TPICGT
Trigger: AGTGCCACATATGGGGGTTCAGATGATTACATTGGT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATTGTGCAATTTATGCATaGTGTGGTGCAGCTATCCGA +
Preference number: 2 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHCAIYA*CGAAIR
Trigger: TCGGATAGCTGCACCACAGCATGCATAAATTGCACA...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357387.8
3UTR-3UTR CCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACAGAAGGAAGTTGTTTTaGTTAGGAAAGTCAGCAGTT +
Preference number: 2 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHRRKLF*LGKSAV
Trigger: AACTGCTGACTTTCCTAACCAAAACAACTTCCTTCT...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAAGAAGGAAGTTGTTTTaGTTAGGAAAGTCAGCAGTT +
Preference number: 2 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIRRKLF*LGKSAV
Trigger: AACTGCTGACTTTCCTAACCAAAACAACTTCCTTCT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAAGCCTCCAACTGTCTTaGAACCTCCCTGGATCTACA +
Preference number: 2 (lower is better)
Translates to: KAINILINPPTTAFSLCKSLQLS*NLPGST
Trigger: TGTAGATCCAGGGAGGTTCCAAGACAGTTGGAGGCT...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGTTGGAGAGAGACAGATaGTTAGACTGTGGCGTCAAA +
Preference number: 2 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMLERDR*LDCGVK
Trigger: TTTGACGCCACAGTCTAACCATCTGTCTCTCTCCAA...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CAA 90 bp TCACATGCTTCATCGAGGATATCAAGAGCTTCAGAGGAAATCGTTTaGTTTTTATCATGTAGCTGGGTCACTAACAACTCAATTCCCCAA +
Preference number: 2 (lower is better)
Translates to: SHASSRISRASEEIV*FLSCSWVTNNSIPQ
Trigger: TTGGGGAATTGAGTTGTTAGTGACCCAGCTACATGATAAAAACAAAACGATTTCCTCTGAAGCTCTTGATATCCTCGATGAAGCATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CAA 90 bp GGACTTGAGCTCATTGAACTTATGCCACTTGTTGTAGTGTCTGTATaGAAACTTTGGCTACGTATCTTCATATGTGAGCTCGTTGAACTT +
Preference number: 2 (lower is better)
Translates to: GLELIELMPLVVVSV*KLWLRIFICELVEL
Trigger: AAGTTCAACGAGCTCACATATGAAGATACGTAGCCAAAGTTTCAATACAGACACTACAACAAGTGGCATAAGTTCAATGAGCTCAAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGTTCAGAAATAACTTGTaGAGGGTGCTTCTGCATATC +
Preference number: 2 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKFRNNL*RVLLHI
Trigger: GATATGCAGAAGCACCCTTCACAAGTTATTTCTGAA...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR TCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGACATTAAGAAAAACGTaGAAGGGCCAAAGTTCCCTC +
Preference number: 2 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMTLRKT*KGQSSL
Trigger: GAGGGAACTTTGGCCCTTTCACGTTTTTCTTAATGT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR TCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATGAAATAATTCTTGTATaGACCTCCGACACGGAAGTC +
Preference number: 2 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHEIILV*TSDTEV
Trigger: GACTTCCGTGTCGGAGGTTCATACAAGAATTATTTC...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATAGATACTCCTGTCTTTaGTGCCTAGTCAGTCGTATT +
Preference number: 2 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHRYSCL*CLVSRI
Trigger: AATACGACTGACTAGGCAGCAAAGACAGGAGTATCT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTATAACTTGTGAAGGGTaGTTCTGCATATCCCATTAT +
Preference number: 2 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSITCEG*FCISHY
Trigger: ATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGAGTTGGTTGCTGGGCTaGAAACCCAGAATTTCAATA +
Preference number: 2 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMSWLLG*KPRISI
Trigger: TATTGAAATTCTGGGTTTCCAGCCCAGCAACCAACT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGAGAGGTGTTATGAAGTaGGATGAAATGCTTCATCCC +
Preference number: 2 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWRGVMK*DEMLHP
Trigger: GGGATGAAGCATTTCATCTCACTTCATAACACCTCT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR TCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATGTCAAAGAGGTGTTATaGAGTGAGATGAAATGCTTC +
Preference number: 2 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHVKEVL*SEMKCF
Trigger: GAAGCATTTCATCTCACTTCATAACACCTCTTTGAC...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR TCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGAGATTAAGGAGACACTaGAATACACTGCATTTTTCC +
Preference number: 2 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKRLRRH*NTLHFS
Trigger: GGAAAAATGCAGTGTATTTCAGTGTCTCCTTAATCT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGAGATACTCCTGTCTTTaGTGCCTAGTCAGTCGTATT +
Preference number: 2 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWRYSCL*CLVSRI
Trigger: AATACGACTGACTAGGCAGCAAAGACAGGAGTATCT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp TATCCCTTTGATAAGATTATGCTTCAGGAGGCTTTTAATGCCCTTGACATAAACTGTGAAGGGTGCTTCTaGATATCCCATTATTGTTCC +
Preference number: 2 (lower is better)
Translates to: YPFDKIMLQEAFNALDINCEGCF*ISHYCS
Trigger: GGAACAATAATGGGATATGCAGAAGCACCCTTCACA...GTTTATGTCAAGGGCATTAAAAGCCTCCTGAAGCATAATCTTATCAAAGGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
3UTR-3UTR GCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGATTGTGGTAATAGGATaGAGCCTTAGAGACACTGAT +
Preference number: 2 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMIVVIG*SLRDTD
Trigger: ATCAGTGTCTCTAAGGCTGCATCCTATTACCACAAT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTCCTGTAATAACACATTaGAACAAAATGAAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSPVITH*NKMKSW
Trigger: CCAACTCTTCATTTTGTTGCAATGTGTTATTACAGG...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTTTTAAAGCGATGAGATaGAAAGTTGATGAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSFKAMR*KVDESG
Trigger: TCCACTTTCATCAACTTTCCATCTCATCGCTTTAAA...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATTCCTTCAGCTGTATCTaGACTATGTCTGTAGTGAAA +
Preference number: 2 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHSFSCI*TMSVVK
Trigger: TTTCACTACAGACATAGTCCAGATACAGCTGAAGGA...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CAA 90 bp GGGCAAATGCTCTTGCACCTCGATCATCATGTGGTGGTATGTTTTTaGTCTGAAAATAGGGAATATCCTTTACCTGGAATATATCATTTA +
Preference number: 2 (lower is better)
Translates to: GQMLLHLDHHVVVCF*SENREYPLPGIYHL
Trigger: TAAATGATATATTCCAGGTAAAGGATATTCCCTATTTTCAGACAAAAAACATACCACCACATGATGATCGAGGTGCAAGAGCATTTGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGCTGAAAAACTCAGCTTaGATTATCTCAAGCTCTAGA +
Preference number: 2 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMLKNSA*IISSSR
Trigger: TCTAGAGCTTGAGATAATTCAAGCTGAGTTTTTCAG...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357387.8
3UTR-3UTR GCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATTATGTAGGTATTCAGTaGTTGGCTCTTGCATACAAT +
Preference number: 2 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHYVGIQ*LALAYN
Trigger: ATTGTATGCAAGAGCCAAGCACTGAATACCTACATA...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATATAACTTGTGAAGGGTaGTTCTGCATATCCCATTAT +
Preference number: 2 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHITCEG*FCISHY
Trigger: ATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGTTGAGGCTCTTCTTCTaGTTTGAGGTTATAAACCTC +
Preference number: 2 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWLRLFF*FEVINL
Trigger: GAGGTTTATAACCTCAAAGCAGAAGAAGAGCCTCAA...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGAACAATTCACTGAAGTaGAGTCAAAGAGGTGTTATG +
Preference number: 2 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMNNSLK*SQRGVM
Trigger: CATAACACCTCTTTGACTGCACTTCAGTGAATTGTT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATAACAATTCACTGAAGTaGAGTCAAAGAGGTGTTATG +
Preference number: 2 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHNNSLK*SQRGVM
Trigger: CATAACACCTCTTTGACTGCACTTCAGTGAATTGTT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGCCATTTGTTTTACAATaGAGCTTTAGGGTTTCTGAC +
Preference number: 2 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMPFVLQ*SFRVSD
Trigger: GTCAGAAACCCTAAAGCTGCATTGTAAAACAAATGG...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
3UTR-3UTR GCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATTCCATTACGAATAAATaGAGAGAGTATCAGTGCCAA +
Preference number: 2 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHSITNK*REYQCQ
Trigger: TTGGCACTGATACTCTCTGCATTTATTCGTAATGGA...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGTTTAAAGCGATGAGATaGAAAGTTGATGAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKFKAMR*KVDESG
Trigger: TCCACTTTCATCAACTTTCCATCTCATCGCTTTAAA...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGAATCCAGATCCAGGTTaGCATATAATTTACTGCTGG +
Preference number: 2 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWNPDPG*HIIYCW
Trigger: CCAGCAGTAAATTATATGCCAACCTGGATCTGGATT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR GCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAATTGAGGCTCTTCTTCTaGTTTGAGGTTATAAACCTC +
Preference number: 2 (lower is better)
Translates to: KAINILINPPTTAFSLCKLRLFF*FEVINL
Trigger: GAGGTTTATAACCTCAAAGCAGAAGAAGAGCCTCAA...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAAACAAACAAAAACCTTaGCCTCATCAACTTAACTTC +
Preference number: 2 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQNKQKP*PHQLNF
Trigger: GAAGTTAAGTTGATGAGGGCAAGGTTTTTGTTTGTT...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357387.8
3UTR-3UTR GCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAACTGGTGTGTTGCAATTaGTTTCTGAATAATGTGGTC +
Preference number: 2 (lower is better)
Translates to: KAINILINPPTTAFSLCKLVCCN*FLNNVV
Trigger: GACCACATTATTCAGAAAGCAATTGCAACACACCAG...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATAAGAAGAAACTCATGTaGTTAGAGAGCATTAAGTCT +
Preference number: 2 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHKKKLM*LESIKS
Trigger: AGACTTAATGCTCTCTAACCACATGAGTTTCTTCTT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357387.8
3UTR CAA 90 bp GATGATAATTTCCCTCCTTTTGGATCACTGCTACTACGATGTTTTTaGTTAGGCAAAGTAAGCGAATTTAAGATACGATTCTTCACAAGT +
Preference number: 2 (lower is better)
Translates to: DDNFPPFGSLLLRCF*LGKVSEFKIRFFTS
Trigger: ACTTGTGAAGAATCGTATCTTAAATTCGCTTACTTTGCCTAACAAAAAACATCGTAGTAGCAGTGATCCAAAAGGAGGGAAATTATCATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CAA 90 bp GTTGAAACTGAACTACTCAAATTAATGACTAATCTTAGAACTTCTTaGCGAAGGAGTATACGGCACATTGGTGTATCATCTGGAATTGTT +
Preference number: 2 (lower is better)
Translates to: VETELLKLMTNLRTS*RRSIRHIGVSSGIV
Trigger: AACAATTCCAGATGATACACCAATGTGCCGTATACTCCTTCGCAAAGAAGTTCTAAGATTAGTCATTAATTTGAGTAGTTCAGTTTCAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAATCCTGTTTAAAGCGATaGGATGGAAAGTTGATGAAA +
Preference number: 2 (lower is better)
Translates to: KAINILINPPTTAFSLCKSCLKR*DGKLMK
Trigger: TTTCATCAACTTTCCATCTCATCGCTTTAAACAGGA...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR GCA 90 bp TATCCCTTTGATAAGATTATGCTTCAGGAGGCTTTTAATGCCCTTGACATAAACACCTCACTCTTACCATaGAAAAATAACTGCAGTTAT +
Preference number: 2 (lower is better)
Translates to: YPFDKIMLQEAFNALDINTSLLP*KNNCSY
Trigger: ATAACTGCAGTTATTTTTGCATGGTAAGAGTGAGGT...GTTTATGTCAAGGGCATTAAAAGCCTCCTGAAGCATAATCTTATCAAAGGGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357387.8
3UTR-3UTR CAA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGAAGGAGAAGCAAACCCTaGTCTCCAAGGTGGGATAAC +
Preference number: 3 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRRRSKP*SPRWDN
Trigger: GTTATCCCACCTTGGAGACAAGGGTTTGCTTCTCCT...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGAATAAGTCCCGGGTTGTaGAGGCTCTTCTTCTGCTTT +
Preference number: 3 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRISPGL*RLFFCF
Trigger: AAAGCAGAAGAAGAGCCTCAACAACCCGGGACTTAT...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp CCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTGGACAACAACCGTGAGCTGTTaGGCCTTGGCAAAATCCAGA +
Preference number: 3 (lower is better)
Translates to: PGEQDQCNHLNPHMWHWTTTVSC*ALAKSR
Trigger: TCTGGATTTTGCCAAGGCCAAACAGCTCACGGTTGT...TGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR TCA 72 bp TATATCCACCGGGAGAGCAAGACCAATGTAATCATCTaGACCCCCATATGTGGCACTGGACACCATGGACCG +
Preference number: 3 (lower is better)
Translates to: YIHRESKTNVII*TPICGTGHHGP
Trigger: CGGTCCATGGTGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGGTGGATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CCA 72 bp GCTGCCACAAAGCCATCTGAAAGCCTCCAACTGTCTTaGAACCTCCCTGGATCTACACTGAGTAGTGCTTCT +
Preference number: 3 (lower is better)
Translates to: AATKPSESLQLS*NLPGSTLSSAS
Trigger: AGAAGCACTACTCAGTGTAGATCCAGGGAGGTTCCAAGACAGTTGGAGGCTTTCAGATGGCTTTGTGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CCA 72 bp GAGCAAGACCAATGTAATCATCTGAACCCCCATATGTaGCACTGGACACCATGGACCGCACTGAGGAAGATC +
Preference number: 3 (lower is better)
Translates to: EQDQCNHLNPHM*HWTPWTALRKI
Trigger: GATCTTCCTCAGTGCGGTCCATGGTGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp GTGTCCATAGTTGTAGCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCAAGCCTCCAACTGTCTaGGAACCTCCCTGGATCTAC +
Preference number: 3 (lower is better)
Translates to: VSIVVASTPTVSREGLELKPPTV*EPPWIY
Trigger: GTAGATCCAGGGAGGTTCCAAGACAGTTGGAGGCTT...GAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGCTACAACTATGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CCA 72 bp AATCATCTGAACCCCCATATGTGGCACTGGACACCATaGACCGCACTGAGGAAGATCGTTGCAGGGTATTTT +
Preference number: 3 (lower is better)
Translates to: NHLNPHMWHWTP*TALRKIVAGYF
Trigger: AAAATACCCTGCAACGATCTTCCTCAGTGCGGTCCATGGTGTCCAGTGCCACATATGGGGGTTCAGATGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGATAAGTCCCGGGTTGTaGAGGCTCTTCTTCTGCTTT +
Preference number: 3 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEISPGL*RLFFCF
Trigger: AAAGCAGAAGAAGAGCCTCAACAACCCGGGACTTAT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR TCA 72 bp AAGAATAGTTTTTGCCTCAGCTGCCACAAAGCCATCTaGAAGCCTCCAACTGTCTTGGAACCTCCCTGGATC +
Preference number: 3 (lower is better)
Translates to: KNSFCLSCHKAI*KPPTVLEPPWI
Trigger: GATCCAGGGAGGTTCCAAGACAGTTGGAGGCTTTCAGATGGCTTTGTGGCAGCTGAGGCAAAAACTATTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTGTGAGCTGTTTGGCCTaGGCAAAATCCAGATCCAGG +
Preference number: 3 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSVSCLA*AKSRSR
Trigger: CCTGGATCTGGATTTTGCCAAGGCCAAACAGCTCAC...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp CCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTGGACAAAGTTCATTACAGAGTaGTTCCACATCATCTGGAAC +
Preference number: 3 (lower is better)
Translates to: PGEQDQCNHLNPHMWHWTKFITE*FHIIWN
Trigger: GTTCCAGATGATGTGGAACAACTCTGTAATGAACTT...TGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp CCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTGGACAATAATTTCCCTCCTTTaGGATCACTGCTACTACGAT +
Preference number: 3 (lower is better)
Translates to: PGEQDQCNHLNPHMWHWTIISLL*DHCYYD
Trigger: ATCGTAGTAGCAGTGATCCAAAAGGAGGGAAATTAT...TGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGAAGATACTCCTGTCTTaGCTGCCTAGTCAGTCGTAT +
Preference number: 3 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVKILLS*LPSQSY
Trigger: ATACGACTGACTAGGCAGCAAAGACAGGAGTATCTT...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CAA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGGCTTCTCTGTCTTCTTaGAGCTGTCCTTCAGCTGTA +
Preference number: 3 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRASLSS*SCPSAV
Trigger: TACAGCTGAAGGACAGCTCAAAGAAGACAGAGAAGC...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp GTGTCCATAGTTGTAGCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCGTTCTGATTCGCCTGTaGCTTGTCTTACTTTCAGAT +
Preference number: 3 (lower is better)
Translates to: VSIVVASTPTVSREGLELVLIRL*LVLLSD
Trigger: ATCTGAAAGTAAGACAAGCAACAGGCGAATCAGAAC...GAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGCTACAACTATGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp GTGTCCATAGTTGTAGCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCCTAACCTCTCTCGGCTaGTATTTTCTCTGTGATTCT +
Preference number: 3 (lower is better)
Translates to: VSIVVASTPTVSREGLELLTSLG*YFLCDS
Trigger: AGAATCACAGAGAAAATACAAGCCGAGAGAGGTTAG...GAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGCTACAACTATGGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR TCA 72 bp TGTCTCCAAGGTGGGATAACGCTGGTTTCATCTGAATaGGAGCATGAAGATTGGCCTTGTCTTCACATGCTT +
Preference number: 3 (lower is better)
Translates to: CLQGGITLVSSE*EHEDWPCLHML
Trigger: AAGCATGTGAAGACAAGGCCAATCTTCATGCTCTCATTCAGATGAAACCAGCGTTATCCCACCTTGGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR TCA 72 bp TATGAACCTCCGACACGGAAGTCTGAATGTGCAGTGTaGCAGCAAATGGGAAACCTCAGAGTAAAGGCATAT +
Preference number: 3 (lower is better)
Translates to: YEPPTRKSECAV*QQMGNLRVKAY
Trigger: ATATGCCTTTACTCTGAGGTTTCCCATTTGCTGTCACACTGCACATTCAGACTTCCGTGTCGGAGGTTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CCA 72 bp CCATCCTCTTCAGATTCAAGAAGAAATTCTGTAAACTaGCAACCTACAACCGTGAGCTGTTTGGCCTTGGCA +
Preference number: 3 (lower is better)
Translates to: PSSSDSRRNSVN*QPTTVSCLALA
Trigger: TGCCAAGGCCAAACAGCTCACGGTTGTAGGTTGCCAGTTTACAGAATTTCTTCTTGAATCTGAAGAGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CCA 72 bp TCAGGATTCAGCAGATGTATCAACTATAGGTTGCTTTaGTGGTGTTGCCAACACAGCCTCTGCTTCTTCATG +
Preference number: 3 (lower is better)
Translates to: SGFSRCINYRLL*WCCQHSLCFFM
Trigger: CATGAAGAAGCAGAGGCTGTGTTGGCAACACCACCAAAGCAACCTATAGTTGATACATCTGCTGAATCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGAGAAGGAAGTTGTTTaGGTTAGGAAAGTCAGCAGT +
Preference number: 3 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVEKEVV*VRKVSS
Trigger: ACTGCTGACTTTCCTAACCAAAACAACTTCCTTCTC...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAGTAGGTATTCAGTGCTaGGCTCTTGCATACAATGGT +
Preference number: 3 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIVGIQC*ALAYNG
Trigger: ACCATTGTATGCAAGAGCCAAGCACTGAATACCTAC...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CAA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGCTTATAAGTCCCGGGTaGTTGAGGCTCTTCTTCTGC +
Preference number: 3 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKLISPG*LRLFFC
Trigger: GCAGAAGAAGAGCCTCAACAACCCGGGACTTATAAG...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CAA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGCTTATAAGTCCCGGGTaGTTGAGGCTCTTCTTCTGC +
Preference number: 3 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMLISPG*LRLFFC
Trigger: GCAGAAGAAGAGCCTCAACAACCCGGGACTTATAAG...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CAA 90 bp GTGTCCATAGTTGTAGCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCGCCTTATTTCCATATTaGGTATGCAAAGTACTCCTA +
Preference number: 3 (lower is better)
Translates to: VSIVVASTPTVSREGLELALFPY*VCKVLL
Trigger: TAGGAGTACTTTGCATACCAAATATGGAAATAAGGC...GAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGCTACAACTATGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCAAAGTGCTTCATTGAGTaGTTCCTCAATCAAGTCAAC +
Preference number: 3 (lower is better)
Translates to: ASTPTVSREGLELIELMPKCFIE*FLNQVN
Trigger: GTTGACTTGATTGAGGAACAACTCAATGAAGCACTT...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTCCCTTAAATGTTTTGTaGCATAGAGTCTGCAGGCAT +
Preference number: 3 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSPLNVL*HRVCRH
Trigger: ATGCCTGCAGACTCTATGCAACAAAACATTTAAGGG...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR TCA 72 bp ACTGAAGTGCAGTCAAAGAGGTGTTATGAAGTGAGATaGAATGCTTCATCCCAACTGGAACTTTCAGTTCCA +
Preference number: 3 (lower is better)
Translates to: TEVQSKRCYEVR*NASSQLELSVP
Trigger: TGGAACTGAAAGTTCCAGTTGGGATGAAGCATTTCATCTCACTTCATAACACCTCTTTGACTGCACTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR TCA 72 bp GTATATCTGGAATCACGTTTTCTTCCTGTAGCAAATTaGGACCCCAATTTGATGAGCCGATATTTCCCAAGG +
Preference number: 3 (lower is better)
Translates to: VYLESRFLPVAN*DPNLMSRYFPR
Trigger: CCTTGGGAAATATCGGCTCATCAAATTGGGGTCTCAATTTGCTACAGGAAGAAAACGTGATTCCAGATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGAAGATACTCCTGTCTTaGCTGCCTAGTCAGTCGTAT +
Preference number: 3 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMKILLS*LPSQSY
Trigger: ATACGACTGACTAGGCAGCAAAGACAGGAGTATCTT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CAA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGTTCAGTGCTTGGCTCTaGCATACAATGGTAACTGAA +
Preference number: 3 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKFSAWL*HTMVTE
Trigger: TTCAGTTACCATTGTATGCAAGAGCCAAGCACTGAA...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGAAGATACTCCTGTCTTaGCTGCCTAGTCAGTCGTAT +
Preference number: 3 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWKILLS*LPSQSY
Trigger: ATACGACTGACTAGGCAGCAAAGACAGGAGTATCTT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CAA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATGAGAAGGAAGTTGTTTaGGTTAGGAAAGTCAGCAGT +
Preference number: 3 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHEKEVV*VRKVSS
Trigger: ACTGCTGACTTTCCTAACCAAAACAACTTCCTTCTC...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CAA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAATTCAGTGCTTGGCTCTaGCATACAATGGTAACTGAA +
Preference number: 3 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQFSAWL*HTMVTE
Trigger: TTCAGTTACCATTGTATGCAAGAGCCAAGCACTGAA...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
3UTR-3UTR CAA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAATAAGTCCCGGGTTGTaGAGGCTCTTCTTCTGCTTT +
Preference number: 3 (lower is better)
Translates to: KAINILINPPTTAFSLCKISPGL*RLFFCF
Trigger: AAAGCAGAAGAAGAGCCTCAACAACCCGGGACTTAT...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR TCA 72 bp ACTAACAGTGCTTGTTCAAGTTCCTGTTTAAAGCGATaGGATGGAAAGTTGATGAAAGTGGAAGTCCATTGC +
Preference number: 3 (lower is better)
Translates to: TNSACSSSCLKR*DGKLMKVEVHC
Trigger: GCAATGGACTTCCACTTTCATCAACTTTCCATCTCATCGCTTTAAACAGGAACTTGAACAAGCACTGTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR TCA 72 bp AATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGTaGGATGAAATGCTTCATCCCAACTGGAACTTTCAG +
Preference number: 3 (lower is better)
Translates to: NSLKCSQRGVMK*DEMLHPNWNFQ
Trigger: CTGAAAGTTCCAGTTGGGATGAAGCATTTCATCTCACTTCATAACACCTCTTTGACTGCACTTCAGTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR TCA 72 bp AAAGGCAGTTTAGTTATCCAAGACCAAAGACCACGATaGCAGGCAACGTTCTTAGAAGTACTGTTGACATTT +
Preference number: 3 (lower is better)
Translates to: KGSLVIQDQRPR*QATFLEVLLTF
Trigger: AAATGTCAACAGTACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTGCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR TCA 72 bp AGCTCTCCTAAAAGGATGGTAGCTCTAACTGAGATATaGTCATCACTGTTTGTTATCACTTCAACTAGACCC +
Preference number: 3 (lower is better)
Translates to: SSPKRMVALTEI*SSLFVITSTRP
Trigger: GGGTCTAGTTGAAGTGATAACAAACAGTGATGATCATATCTCAGTTAGAGCTACCATCCTTTTAGGAGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR GCA 72 bp GTTATCACCATCAACAGGCTTCCGGTAAGTAGTAAGTaGTTCATTGAGTTGTTCCTCAATCAAGTCAACATA +
Preference number: 3 (lower is better)
Translates to: VITINRLPVSSK*FIELFLNQVNI
Trigger: TATGTTGACTTGATTGAGGAACAACTCAATGAAGCACTTACTACTTACCGGAAGCCTGTTGATGGTGATAAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGTTCAGTGCTTGGCTCTaGCATACAATGGTAACTGAA +
Preference number: 3 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWFSAWL*HTMVTE
Trigger: TTCAGTTACCATTGTATGCAAGAGCCAAGCACTGAA...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGGCTGCAGTTAAAATTTaGGAAAGGATGACTCTAGCC +
Preference number: 3 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWAAVKI*ERMTLA
Trigger: GGCTAGAGTCATCCTTTCCAAAATTTTAACTGCAGC...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATTCAACATATTTGGAGTaGTATTCCCTGTGCCACTTT +
Preference number: 3 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHSTYLE*YSLCHF
Trigger: AAAGTGGCACAGGGAATACAACTCCAAATATGTTGA...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CCA 72 bp CAGTGCTTGTTCAAGTTCCTGTTTAAAGCGATGAGATaGAAAGTTGATGAAAGTGGAAGTCCATTGCAAATA +
Preference number: 3 (lower is better)
Translates to: QCLFKFLFKAMR*KVDESGSPLQI
Trigger: TATTTGCAATGGACTTCCACTTTCATCAACTTTCCATCTCATCGCTTTAAACAGGAACTTGAACAAGCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR CCA 72 bp CTTATGCCACTTGTTGTAGTGTCTGTATTGAAACTTTaGCTACGTATCTTCATATGTGAGCTCGTTGAACTT +
Preference number: 3 (lower is better)
Translates to: LMPLVVVSVLKL*LRIFICELVEL
Trigger: AAGTTCAACGAGCTCACATATGAAGATACGTAGCCAAAGTTTCAATACAGACACTACAACAAGTGGCATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR-3UTR CAA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGTCAGAGGAAATCGTTTaGTTTTTATCATGTAGCTGG +
Preference number: 3 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMSEEIV*FLSCSW
Trigger: CCAGCTACATGATAAAAACAAAACGATTTCCTCTGA...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR GCA 72 bp TCTCCAATGCTTGGTGTACTACCAGTGTCTTCAATGTaGTTATTCCCCATAAATGAAGTCTCTAATTGTAAT +
Preference number: 3 (lower is better)
Translates to: SPMLGVLPVSSM*LFPINEVSNCN
Trigger: ATTACAATTAGAGACTTCATTTATGGGGAATAAGCACATTGAAGACACTGGTAGTACACCAAGCATTGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CCA 72 bp ATTACATTACTTCCTTTGGAGGTTTTAACCACTATTTaGTCTAGTAACTCTGACATTTGGTTCTCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: ITLLPLEVLTTI*SSNSDIWFSGK
Trigger: CTTTCCAGAGAACCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAATGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGACTTCTAGGAAGCGTATaGGAAGAACCTGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRLLGSV*EEPGGT
Trigger: GGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAG...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGCCCCATATGTGGCACTaGACACCATGGACCGCACTG +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEPHMWH*TPWTAL
Trigger: CAGTGCGGTCCATGGTGTCCAGTGCCACATATGGGG...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGCTGAACCCCCATATGTaGCACTGGACACCATGGACC +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGELNPHM*HWTPWT
Trigger: GGTCCATGGTGTCCAGTGCCACATATGGGGGTTCAG...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGAACCAATGTAATCATCTaGACCCCCATATGTGGCACT +
Preference number: 4 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRTNVII*TPICGT
Trigger: AGTGCCACATATGGGGGTTCAGATGATTACATTGGT...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp GTGTCCATAGTTGTAGCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCTTTGGTGCTGCTAGCTaGGCCTTCTTGAGACACCCC +
Preference number: 4 (lower is better)
Translates to: VSIVVASTPTVSREGLELFGAAS*AFLRHP
Trigger: GGGGTGTCTCAAGAAGGCTCAGCTAGCAGCACCAAA...GAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGCTACAACTATGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGATCCTCTCTACCTCGTTaGTCTGTTGTATGTCAATGC +
Preference number: 4 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRSSLPR*SVVCQC
Trigger: GCATTGACATACAACAGAGCAACGAGGTAGAGAGGA...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGCACCATGGACCGCACTaGGGAAGATCGTTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRHHGPH*GRSLQG
Trigger: ACCCTGCAACGATCTTCCTCAGTGCGGTCCATGGTG...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGAGCTCTTCTTCTGCTTTaGGGTTATAAACCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRALLLL*GYKPLK
Trigger: CTTCAGAGGTTTATAACCTCAAAGCAGAAGAAGAGC...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGCCCCATATGTGGCACTaGACACCATGGACCGCACTG +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRPHMWH*TPWTAL
Trigger: CAGTGCGGTCCATGGTGTCCAGTGCCACATATGGGG...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATACCCCATATGTGGCACTaGACACCATGGACCGCACTG +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIPHMWH*TPWTAL
Trigger: CAGTGCGGTCCATGGTGTCCAGTGCCACATATGGGG...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGCATATTGCACTCAGTTaGTTGCTGGGCTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEHIALS*LLGWKP
Trigger: GGGTTTCCAGCCCAGCAACCAACTGAGTGCAATATG...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGCTGGATCTGGCACGATaGGGAAGAATAGTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGELDLAR*GRIVFA
Trigger: GGCAAAAACTATTCTTCCTCATCGTGCCAGATCCAG...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTGGACAGCCAAAGCTTCAGAGTaGGATAAGGATGGATGCATT +
Preference number: 4 (lower is better)
Translates to: PGEQDQCNHLNPHMWHWTAKASE*DKDGCI
Trigger: AATGCATCCATCCTTATCTCACTCTGAAGCTTTGGC...TGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGTTTGGTGCTGCTAGCTaGGCCTTCTTGAGACACCCC +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRFGAAS*AFLRHP
Trigger: GGGGTGTCTCAAGAAGGCTCAGCTAGCAGCACCAAA...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGTCCGACACGGAAGTCTaGATGTGCAGTGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVSDTEV*MCSVTA
Trigger: TGCTGTCACACTGCACATTCAGACTTCCGTGTCGGA...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GTGTCCATAGTTGTAGCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCCCCTTGTCTCCAAGGTaGGATAACGCTGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: VSIVVASTPTVSREGLELPLSPR*DNAGFI
Trigger: GATGAAACCAGCGTTATCCCACCTTGGAGACAAGGG...GAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGCTACAACTATGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGATCATCTGGAACCACTaGCCACAGATGTTTGCGACT +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEIIWNH*PQMFAT
Trigger: AGTCGCAAACATCTGTGGCCAGTGGTTCCAGATGAT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACTGGCACTGGACACCATaGACCGCACTGAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHWHWTP*TALRKI
Trigger: GATCTTCCTCAGTGCGGTCCATGGTGTCCAGTGCCA...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATACTGAACCCCCATATGTaGCACTGGACACCATGGACC +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVILNPHM*HWTPWT
Trigger: GGTCCATGGTGTCCAGTGCCACATATGGGGGTTCAG...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTGGACAAACTATAGGTTGCTTTaGTGGTGTTGCCAACACAGC +
Preference number: 4 (lower is better)
Translates to: PGEQDQCNHLNPHMWHWTNYRLL*WCCQHS
Trigger: GCTGTGTTGGCAACACCACCAAAGCAACCTATAGTT...TGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGAACCGCAAACAAATTATaGTATCCTCATAGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRTANKL*YPHSES
Trigger: GCTTTCACTATGAGGATATCATAATTTGTTTGCGGT...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGCTTCTCTGTCTTCTTTaGGCTGTCCTTCAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGELLCLL*AVLQLY
Trigger: ATACAGCTGAAGGACAGCTCAAAGAAGACAGAGAAG...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGAAGATTCTCTTTATGTTaGAGGACTTGGCTATCTCTA +
Preference number: 4 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRRFSLC*RTWLSL
Trigger: TAGAGATAGCCAAGTCCTTCAACATAAAGAGAATCT...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp ATCCATGAGGTCTGGCCTGGATCTGGCACGATGAGGAAGAATAGTTTTTGCCTCATACACAGGTCCCTCTaGTGGAAAGAACTTCACACT +
Preference number: 4 (lower is better)
Translates to: IHEVWPGSGTMRKNSFCLIHRSL*WKELHT
Trigger: AGTGTGAAGTTCTTTCCATCAGAGGGACCTGTGTAT...GAGGCAAAAACTATTCTTCCTCATCGTGCCAGATCCAGGCCAGACCTCATGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCTTCTAGGAAGCGTATaGGAAGAACCTGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHLLGSV*EEPGGT
Trigger: GGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAG...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATACTAGCTGAGCCTTCTTaGGACACCCCATCACTGCAT +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVILAEPS*DTPSLH
Trigger: ATGCAGTGATGGGGTGTCTCAAGAAGGCTCAGCTAG...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACTCCGACACGGAAGTCTaGATGTGCAGTGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHSDTEV*MCSVTA
Trigger: TGCTGTCACACTGCACATTCAGACTTCCGTGTCGGA...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGGATAATGGCAATGCATaGTCGGACCATTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEDNGNA*SDHSVS
Trigger: AGAGACAGAATGGTCCGAGCATGCATTGCCATTATC...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGATCCATTACGAATAAATaGAGAGAGTATCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRSITNK*REYQCQ
Trigger: TTGGCACTGATACTCTCTGCATTTATTCGTAATGGA...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGTTACCACAGTACTCATaGTTCCACAGTCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGELPQYS*FHSLCP
Trigger: TGGACACAGACTGTGGAAGCATGAGTACTGTGGTAA...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCAGAGACACCCCATCACTaGATCCAGAAATCCCCGAAA +
Preference number: 4 (lower is better)
Translates to: ASTPTVSREGLELIELMPETPHH*IQKSPK
Trigger: TTTCGGGGATTTCTGGATGCAGTGATGGGGTGTCTC...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGGCAGTCTCTTTTCCTTaGGGATATCAAAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEAVSFP*GYQRMQ
Trigger: CTGCATCCTTTGATATCCCCAAGGAAAAGAGACTGC...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTGGACAAGAAATTCTGTAAACTaGCAACCTACAACCGTGAGC +
Preference number: 4 (lower is better)
Translates to: PGEQDQCNHLNPHMWHWTRNSVN*QPTTVS
Trigger: GCTCACGGTTGTAGGTTGCCAGTTTACAGAATTTCT...TGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGCAGATGGTTAGACTGTaGCGTCAAATAGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEQMVRL*RQIVAC
Trigger: ACAAGCCACTATTTGACGCCACAGTCTAACCATCTG...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTCTGAACCCCCATATGTaGCACTGGACACCATGGACC +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSLNPHM*HWTPWT
Trigger: GGTCCATGGTGTCCAGTGCCACATATGGGGGTTCAG...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGACCTCCAGTTCCAGATaGAAGACCTCCTGCATCATG +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVTSSSR*KTSCIM
Trigger: CATGATGCAGGAGGTCTTCCATCTGGAACTGGAGGT...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296782.9
ENST00000357387.8
CDS-3UTR CCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGAACTATAGGTTGCTTTaGTGGTGTTGCCAACACAGC +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGENYRLL*WCCQHS
Trigger: GCTGTGTTGGCAACACCACCAAAGCAACCTATAGTT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATATGCCACAAAGCCATCTaGAAGCCTCCAACTGTCTTG +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVICHKAI*KPPTVL
Trigger: CAAGACAGTTGGAGGCTTTCAGATGGCTTTGTGGCA...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTAGGCAACCTACAACCGTaGGCTGTTTGGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLGNLQP*AVWPWQ
Trigger: TTGCCAAGGCCAAACAGCTCACGGTTGTAGGTTGCC...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp CCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTGGACAGAAGCATTGAGCCACTaGACAATATCCTTTACTAGA +
Preference number: 4 (lower is better)
Translates to: PGEQDQCNHLNPHMWHWTEALSH*TISFTR
Trigger: TCTAGTAAAGGATATTGTTCAGTGGCTCAATGCTTC...TGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATCACCATGGACCGCACTaGGGAAGATCGTTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHHHGPH*GRSLQG
Trigger: ACCCTGCAACGATCTTCCTCAGTGCGGTCCATGGTG...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGGAAATAATTCTTGTATaGACCTCCGACACGGAAGTC +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEEIILV*TSDTEV
Trigger: GACTTCCGTGTCGGAGGTTCATACAAGAATTATTTC...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATACTGGCCACAGATGTTTaGGACTATGCCTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVILATDV*DYASQH
Trigger: ATGCTGTGAGGCATAGTCGCAAACATCTGTGGCCAG...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGTGCATCATGGGCAAATaGTCTTGCACCTCGATCATC +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVCIMGK*SCTSII
Trigger: GATGATCGAGGTGCAAGAGCATTTGCCCATGATGCA...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGGAGACACCCCATCACTaGATCCAGAAATCCCCGAAA +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRETPHH*IQKSPK
Trigger: TTTCGGGGATTTCTGGATGCAGTGATGGGGTGTCTC...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAGAGACACCCCATCACTaGATCCAGAAATCCCCGAAA +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIETPHH*IQKSPK
Trigger: TTTCGGGGATTTCTGGATGCAGTGATGGGGTGTCTC...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATATTGCTTTGGTGGTGTTaGCAACACAGCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVILLWWC*QHSLCF
Trigger: GAAGCAGAGGCTGTGTTGGCAACACCACCAAAGCAA...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGAGAATACTGGAGTCTTaGATGAGATATCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGERILES*MRYRSA
Trigger: AGCGCTTCGATATCTCATCCAAGACTCCAGTATTCT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AGCATGAAGATTGGCCTTGTCTTCACATGCTTCATCGAGGATATCAAGAGCTTCAGTTCAAGGCTGCACTaGCTCGCAGTCTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SMKIGLVFTCFIEDIKSFSSRLH*LAVSFP
Trigger: AGGAAAAGAGACTGCGAGCCAGTGCAGCCTTGAACT...GAAGCTCTTGATATCCTCGATGAAGCATGTGAAGACAAGGCCAATCTTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGCCCTTGTCTCCAAGGTaGGATAACGCTGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRPLSPR*DNAGFI
Trigger: GATGAAACCAGCGTTATCCCACCTTGGAGACAAGGG...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTACGTATGAGAAGAACCTaGAGGCACCAGGGACACCGA +
Preference number: 4 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLRMRRT*RHQGHR
Trigger: TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACG...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACAGACCTCCTGCATCATaGGCAAATGCTCTTGCACCT +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHRPPAS*ANALAP
Trigger: AGGTGCAAGAGCATTTGCCCATGATGCAGGAGGTCT...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296782.9
ENST00000357387.8
CDS-3UTR CCA 90 bp CCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTGGACAGAGTATACGGCACATTaGTGTATCATCTGGAATTGT +
Preference number: 4 (lower is better)
Translates to: PGEQDQCNHLNPHMWHWTEYTAH*CIIWNC
Trigger: ACAATTCCAGATGATACACCAATGTGCCGTATACTC...TGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCATATAGGTTGCTTTGGTaGTGTTGCCAACACAGCCTC +
Preference number: 4 (lower is better)
Translates to: ASTPTVSREGLELIELMPYRLLW*CCQHSL
Trigger: GAGGCTGTGTTGGCAACACCACCAAAGCAACCTATA...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCTGGATCTGGCACGATaGGGAAGAATAGTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHLDLAR*GRIVFA
Trigger: GGCAAAAACTATTCTTCCTCATCGTGCCAGATCCAG...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp ATCCATGAGGTCTGGCCTGGATCTGGCACGATGAGGAAGAATAGTTTTTGCCTCGATGGTAGCTCTAACTaGGATATGATCATCACTGTT +
Preference number: 4 (lower is better)
Translates to: IHEVWPGSGTMRKNSFCLDGSSN*DMIITV
Trigger: AACAGTGATGATCATATCTCAGTTAGAGCTACCATC...GAGGCAAAAACTATTCTTCCTCATCGTGCCAGATCCAGGCCAGACCTCATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGCTGGTTTCATCTGAATaGGAGCATGAAGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVLVSSE*EHEDWP
Trigger: AGGCCAATCTTCATGCTCTCATTCAGATGAAACCAG...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGACAGCATCCCAGTTGTaGCATTTTAGAATATCACAG +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGETASQL*HFRISQ
Trigger: CTGTGATATTCTAAAATGTCACAACTGGGATGCTGT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAGACCAAAGACCACGATaGCAGGCAACGTTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIDQRPR*QATFLE
Trigger: TTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTC...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp AGCATGAAGATTGGCCTTGTCTTCACATGCTTCATCGAGGATATCAAGAGCTTCAGATGTTTGCGACTATaGCTCACAGCATCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: SMKIGLVFTCFIEDIKSFRCLRL*LTASQL
Trigger: CAACTGGGATGCTGTGAGGCATAGTCGCAAACATCT...GAAGCTCTTGATATCCTCGATGAAGCATGTGAAGACAAGGCCAATCTTCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAATGGGCAAATGCTCTTaGACCTCGATCATCATGTGG +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIMGKCS*TSIIMW
Trigger: CCACATGATGATCGAGGTGCAAGAGCATTTGCCCAT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACAGATGGAAGACCTCCTaGATCATGGGCAAATGCTCT +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHRWKTS*IMGKCS
Trigger: AGAGCATTTGCCCATGATGCAGGAGGTCTTCCATCT...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296782.9
ENST00000357387.8
CDS-3UTR GCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTTTGCACTCAGTTGGTTaGTGGGCTGGAAACCCAGAA +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSLHSVG*WAGNPE
Trigger: TTCTGGGTTTCCAGCCCAGCAACCAACTGAGTGCAA...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTTTGCTTTGGTGGTGTTaGCAACACAGCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSLLWWC*QHSLCF
Trigger: GAAGCAGAGGCTGTGTTGGCAACACCACCAAAGCAA...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GTGTCCATAGTTGTAGCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCTCATGTACCAGTAACTaGGGAACAGTGTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: VSIVVASTPTVSREGLELSCTSN*GTVYRR
Trigger: TCTTCTGTACACTGTTCCGCAGTTACTGGTACATGA...GAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGCTACAACTATGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGAATTTTAGCACCTTCTaGAGAATACTGGAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGENFSTF*RILESW
Trigger: CCAAGACTCCAGTATTCTCCAGAAGGTGCTAAAATT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp ATCCATGAGGTCTGGCCTGGATCTGGCACGATGAGGAAGAATAGTTTTTGCCTCTCCTTCAGCTGTATCTaGACTATGTCTGTAGTGAAA +
Preference number: 4 (lower is better)
Translates to: IHEVWPGSGTMRKNSFCLSFSCI*TMSVVK
Trigger: TTTCACTACAGACATAGTCCAGATACAGCTGAAGGA...GAGGCAAAAACTATTCTTCCTCATCGTGCCAGATCCAGGCCAGACCTCATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTATTATCCATGAGGTCTaGCCTGGATCTGGCACGATG +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSIIHEV*PGSGTM
Trigger: CATCGTGCCAGATCCAGGCCAGACCTCATGGATAAT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAATCATCTGGAACCACTaGCCACAGATGTTTGCGACT +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIIIWNH*PQMFAT
Trigger: AGTCGCAAACATCTGTGGCCAGTGGTTCCAGATGAT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGTTGTTCCACATCATCTaGAACCACTGGCCACAGATG +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRLFHII*NHWPQM
Trigger: CATCTGTGGCCAGTGGTTCCAGATGATGTGGAACAA...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACTTGTTCCACATCATCTaGAACCACTGGCCACAGATG +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHLFHII*NHWPQM
Trigger: CATCTGTGGCCAGTGGTTCCAGATGATGTGGAACAA...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCACAGATGGTTAGACTGTaGCGTCAAATAGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ASTPTVSREGLELIELMPQMVRL*RQIVAC
Trigger: ACAAGCCACTATTTGACGCCACAGTCTAACCATCTG...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATCGTATGAGAAGAACCTaGAGGCACCAGGGACACCGA +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHRMRRT*RHQGHR
Trigger: TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACG...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATTGGCACTGGACACCATaGACCGCACTGAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHWHWTP*TALRKI
Trigger: GATCTTCCTCAGTGCGGTCCATGGTGTCCAGTGCCA...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTAGACCTCCTGCATCATaGGCAAATGCTCTTGCACCT +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSRPPAS*ANALAP
Trigger: AGGTGCAAGAGCATTTGCCCATGATGCAGGAGGTCT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296782.9
ENST00000357387.8
3UTR CAA 72 bp AATTCTGTAAACTGGCAACCTACAACCGTGAGCTGTTaGGCCTTGGCAAAATCCAGATCCAGGTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: NSVNWQPTTVSC*ALAKSRSRLAY
Trigger: ATATGCCAACCTGGATCTGGATTTTGCCAAGGCCAAACAGCTCACGGTTGTAGGTTGCCAGTTTACAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACACCACCTCTGGATTCTaGAGTGCTAGTTCACAGATA +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHTTSGF*SASSQI
Trigger: TATCTGTGAACTAGCACTTCAGAATCCAGAGGTGGT...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGCATGAAGATTGGCCTTGTCTTCACATGCTTCATCGAGGATATCAAGAGCTTCACCACCTCTGGATTCTaGAGTGCTAGTTCACAGATA +
Preference number: 4 (lower is better)
Translates to: SMKIGLVFTCFIEDIKSFTTSGF*SASSQI
Trigger: TATCTGTGAACTAGCACTTCAGAATCCAGAGGTGGT...GAAGCTCTTGATATCCTCGATGAAGCATGTGAAGACAAGGCCAATCTTCATGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATACTTCTCTGTCTTCTTTaGGCTGTCCTTCAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVILLCLL*AVLQLY
Trigger: ATACAGCTGAAGGACAGCTCAAAGAAGACAGAGAAG...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGTGCCACAAAGCCATCTaGAAGCCTCCAACTGTCTTG +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKCHKAI*KPPTVL
Trigger: CAAGACAGTTGGAGGCTTTCAGATGGCTTTGTGGCA...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTCTGGATCTGGCACGATaGGGAAGAATAGTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSLDLAR*GRIVFA
Trigger: GGCAAAAACTATTCTTCCTCATCGTGCCAGATCCAG...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGGGCAACCTACAACCGTaGGCTGTTTGGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWGNLQP*AVWPWQ
Trigger: TTGCCAAGGCCAAACAGCTCACGGTTGTAGGTTGCC...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGAGATTAAGGAGACACTaGAATACACTGCATTTTTCC +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGERLRRH*NTLHFS
Trigger: GGAAAAATGCAGTGTATTTCAGTGTCTCCTTAATCT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGCTTCCTGTAGCAAATTaGGACCCCAATTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRLPVAN*DPNLMS
Trigger: GCTCATCAAATTGGGGTCTCAATTTGCTACAGGAAG...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCTTCCTGTAGCAAATTaGGACCCCAATTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHLPVAN*DPNLMS
Trigger: GCTCATCAAATTGGGGTCTCAATTTGCTACAGGAAG...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAATACACAGGTCCCTCTaGTGGAAAGAACTTCACACT +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIIHRSL*WKELHT
Trigger: AGTGTGAAGTTCTTTCCATCAGAGGGACCTGTGTAT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTGGTCATCCTCCAATATaGACATACTCGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSGHPPI*TYSMAQ
Trigger: CTGTGCCATCGAGTATGTTCATATTGGAGGATGACC...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATCTTCTAGGAAGCGTATaGGAAGAACCTGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHLLGSV*EEPGGT
Trigger: GGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAG...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGGCCAAAGCTTCAGAGTaGGATAAGGATGGATGCATT +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRAKASE*DKDGCI
Trigger: AATGCATCCATCCTTATCTCACTCTGAAGCTTTGGC...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACACCAATGTAATCATCTaGACCCCCATATGTGGCACT +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHTNVII*TPICGT
Trigger: AGTGCCACATATGGGGGTTCAGATGATTACATTGGT...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATCTAGCTGAGCCTTCTTaGGACACCCCATCACTGCAT +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHLAEPS*DTPSLH
Trigger: ATGCAGTGATGGGGTGTCTCAAGAAGGCTCAGCTAG...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGTTTGGTGCTGCTAGCTaGGCCTTCTTGAGACACCCC +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWFGAAS*AFLRHP
Trigger: GGGGTGTCTCAAGAAGGCTCAGCTAGCAGCACCAAA...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATTCCGACACGGAAGTCTaGATGTGCAGTGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHSDTEV*MCSVTA
Trigger: TGCTGTCACACTGCACATTCAGACTTCCGTGTCGGA...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGAAATAATTCTTGTATaGACCTCCGACACGGAAGTC +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVEIILV*TSDTEV
Trigger: GACTTCCGTGTCGGAGGTTCATACAAGAATTATTTC...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp ATCCATGAGGTCTGGCCTGGATCTGGCACGATGAGGAAGAATAGTTTTTGCCTCTCCTGTTTAAAGCGATaGGATGGAAAGTTGATGAAA +
Preference number: 4 (lower is better)
Translates to: IHEVWPGSGTMRKNSFCLSCLKR*DGKLMK
Trigger: TTTCATCAACTTTCCATCTCATCGCTTTAAACAGGA...GAGGCAAAAACTATTCTTCCTCATCGTGCCAGATCCAGGCCAGACCTCATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp GTGTCCATAGTTGTAGCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCTGTTATGAAGTGAGATaGAATGCTTCATCCCAACTG +
Preference number: 4 (lower is better)
Translates to: VSIVVASTPTVSREGLELCYEVR*NASSQL
Trigger: CAGTTGGGATGAAGCATTTCATCTCACTTCATAACA...GAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGCTACAACTATGGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGAGAGGTGTTATGAAGTaGGATGAAATGCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVRGVMK*DEMLHP
Trigger: GGGATGAAGCATTTCATCTCACTTCATAACACCTCT...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTGACCAAAGACCACGATaGCAGGCAACGTTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSDQRPR*QATFLE
Trigger: TTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTC...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGTCCTCTCTACCTCGTTaGTCTGTTGTATGTCAATGC +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRSSLPR*SVVCQC
Trigger: GCATTGACATACAACAGAGCAACGAGGTAGAGAGGA...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACTCCTCTCTACCTCGTTaGTCTGTTGTATGTCAATGC +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHSSLPR*SVVCQC
Trigger: GCATTGACATACAACAGAGCAACGAGGTAGAGAGGA...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACGGCCTTGTCTTCACATaGTTCATCGAGGATATCAAG +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHGLVFT*FIEDIK
Trigger: CTTGATATCCTCGATGAAGCATGTGAAGACAAGGCC...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGGAGTTGTATTCCCTGTaGCACTTTTCCAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEELYSL*HFSNCF
Trigger: AAAACAATTGGAAAAGTGGCACAGGGAATACAACTC...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp ATCCATGAGGTCTGGCCTGGATCTGGCACGATGAGGAAGAATAGTTTTTGCCTCGAGTTGTATTCCCTGTaGCACTTTTCCAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: IHEVWPGSGTMRKNSFCLELYSL*HFSNCF
Trigger: AAAACAATTGGAAAAGTGGCACAGGGAATACAACTC...GAGGCAAAAACTATTCTTCCTCATCGTGCCAGATCCAGGCCAGACCTCATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATATTACCACAGTACTCATaGTTCCACAGTCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVILPQYS*FHSLCP
Trigger: TGGACACAGACTGTGGAAGCATGAGTACTGTGGTAA...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGTATCAACTATAGGTTaGTTTGGTGGTGTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVVSTIG*FGGVAN
Trigger: GTTGGCAACACCACCAAAGCAACCTATAGTTGATAC...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGAGATACTCCTGTCTTTaGTGCCTAGTCAGTCGTATT +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVRYSCL*CLVSRI
Trigger: AATACGACTGACTAGGCAGCAAAGACAGGAGTATCT...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGTCATGTACCAGTAACTaGGGAACAGTGTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVSCTSN*GTVYRR
Trigger: TCTTCTGTACACTGTTCCGCAGTTACTGGTACATGA...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp CCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTGGACAAACAAACAAAAACCTTaGCCTCATCAACTTAACTTC +
Preference number: 4 (lower is better)
Translates to: PGEQDQCNHLNPHMWHWTNKQKP*PHQLNF
Trigger: GAAGTTAAGTTGATGAGGGCAAGGTTTTTGTTTGTT...TGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGAACAATTCACTGAAGTaGAGTCAAAGAGGTGTTATG +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGENNSLK*SQRGVM
Trigger: CATAACACCTCTTTGACTGCACTTCAGTGAATTGTT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGTTGGCCGTTGTGATATaGCCTGAAAAACTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRLAVVI*PEKLSL
Trigger: CAAGCTGAGTTTTTCAGGGCATATCACAACGGCCAA...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCATTCTGTACTTTCTCCTaGATCATGGGCAAATGCTCT +
Preference number: 4 (lower is better)
Translates to: ASTPTVSREGLELIELMPFCTFS*IMGKCS
Trigger: AGAGCATTTGCCCATGATGCAGGAGAAAGTACAGAA...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGAGCCTCCAACTGTCTTaGAACCTCCCTGGATCTACA +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKSLQLS*NLPGST
Trigger: TGTAGATCCAGGGAGGTTCCAAGACAGTTGGAGGCT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGATTATCCATGAGGTCTaGCCTGGATCTGGCACGATG +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKIIHEV*PGSGTM
Trigger: CATCGTGCCAGATCCAGGCCAGACCTCATGGATAAT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACTTGGAGAGAGACAGATaGTTAGACTGTGGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHLERDR*LDCGVK
Trigger: TTTGACGCCACAGTCTAACCATCTGTCTCTCTCCAA...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATATTGGAGAGAGACAGATaGTTAGACTGTGGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVILERDR*LDCGVK
Trigger: TTTGACGCCACAGTCTAACCATCTGTCTCTCTCCAA...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGCGTATGAGAAGAACCTaGAGGCACCAGGGACACCGA +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWRMRRT*RHQGHR
Trigger: TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACG...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGCATATTGCACTCAGTTaGTTGCTGGGCTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKHIALS*LLGWKP
Trigger: GGGTTTCCAGCCCAGCAACCAACTGAGTGCAATATG...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTACATATTGCACTCAGTTaGTTGCTGGGCTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLHIALS*LLGWKP
Trigger: GGGTTTCCAGCCCAGCAACCAACTGAGTGCAATATG...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTACCAAATAATTATCCATaGGGTCTGGCCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLPNNYP*GLAWIW
Trigger: CCAGATCCAGGCCAGACCTCATGGATAATTATTTGG...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTCTGGTTTCATCTGAATaGGAGCATGAAGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSLVSSE*EHEDWP
Trigger: AGGCCAATCTTCATGCTCTCATTCAGATGAAACCAG...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTATACACAGGTCCCTCTaGTGGAAAGAACTTCACACT +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSIHRSL*WKELHT
Trigger: AGTGTGAAGTTCTTTCCATCAGAGGGACCTGTGTAT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTACCAATGTAATCATCTaGACCCCCATATGTGGCACT +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSTNVII*TPICGT
Trigger: AGTGCCACATATGGGGGTTCAGATGATTACATTGGT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACACATTAAGAAAAACGTaGAAGGGCCAAAGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHTLRKT*KGQSSL
Trigger: GAGGGAACTTTGGCCCTTTCACGTTTTTCTTAATGT...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAACATTAAGAAAAACGTaGAAGGGCCAAAGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVITLRKT*KGQSSL
Trigger: GAGGGAACTTTGGCCCTTTCACGTTTTTCTTAATGT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGTGTTATGAAGTGAGATaGAATGCTTCATCCCAACTG +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVCYEVR*NASSQL
Trigger: CAGTTGGGATGAAGCATTTCATCTCACTTCATAACA...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAAGAGGTGTTATGAAGTaGGATGAAATGCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIRGVMK*DEMLHP
Trigger: GGGATGAAGCATTTCATCTCACTTCATAACACCTCT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGAGAGGTGTTATGAAGTaGGATGAAATGCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRRGVMK*DEMLHP
Trigger: GGGATGAAGCATTTCATCTCACTTCATAACACCTCT...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGGACCAAAGACCACGATaGCAGGCAACGTTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKDQRPR*QATFLE
Trigger: TTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTC...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTAACACTTGGCCGTTGTaGTATGCCCTGAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSNTWPL*YALKNS
Trigger: TGAGTTTTTCAGGGCATATCACAACGGCCAAGTGTT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGCTGGCCACAGATGTTTaGGACTATGCCTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMLATDV*DYASQH
Trigger: ATGCTGTGAGGCATAGTCGCAAACATCTGTGGCCAG...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAACTGGCCACAGATGTTTaGGACTATGCCTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQLATDV*DYASQH
Trigger: ATGCTGTGAGGCATAGTCGCAAACATCTGTGGCCAG...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTTTACCACAGTACTCATaGTTCCACAGTCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSLPQYS*FHSLCP
Trigger: TGGACACAGACTGTGGAAGCATGAGTACTGTGGTAA...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAATCTTTTGCTGGAGATaGCAAAGCTTCAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIIFCWR*QSFRVR
Trigger: TCTCACTCTGAAGCTTTGGCATCTCCAGCAAAAGAT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGATGGGCAAATGCTCTTaGACCTCGATCATCATGTGG +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKMGKCS*TSIIMW
Trigger: CCACATGATGATCGAGGTGCAAGAGCATTTGCCCAT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTAATGGGCAAATGCTCTTaGACCTCGATCATCATGTGG +
Preference number: 4 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLMGKCS*TSIIMW
Trigger: CCACATGATGATCGAGGTGCAAGAGCATTTGCCCAT...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATTTGCTTTGGTGGTGTTaGCAACACAGCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHLLWWC*QHSLCF
Trigger: GAAGCAGAGGCTGTGTTGGCAACACCACCAAAGCAA...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAGTATCAACTATAGGTTaGTTTGGTGGTGTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIVSTIG*FGGVAN
Trigger: GTTGGCAACACCACCAAAGCAACCTATAGTTGATAC...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGGTATCAACTATAGGTTaGTTTGGTGGTGTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRVSTIG*FGGVAN
Trigger: GTTGGCAACACCACCAAAGCAACCTATAGTTGATAC...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCATTGAGGCTCTTCTTCTaGTTTGAGGTTATAAACCTC +
Preference number: 4 (lower is better)
Translates to: ASTPTVSREGLELIELMPLRLFF*FEVINL
Trigger: GAGGTTTATAACCTCAAAGCAGAAGAAGAGCCTCAA...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp ATCCATGAGGTCTGGCCTGGATCTGGCACGATGAGGAAGAATAGTTTTTGCCTCCCTGTAATAACACATTaGAACAAAATGAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: IHEVWPGSGTMRKNSFCLPVITH*NKMKSW
Trigger: CCAACTCTTCATTTTGTTGCAATGTGTTATTACAGG...GAGGCAAAAACTATTCTTCCTCATCGTGCCAGATCCAGGCCAGACCTCATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGACCTCACTCTTACCATaGAAAAATAACTGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGETSLLP*KNNCSY
Trigger: ATAACTGCAGTTATTTTTGCATGGTAAGAGTGAGGT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGCCTTTGATAAGATTATaGTTCAGGAGGCTTTTAATG +
Preference number: 4 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEPLIRL*FRRLLM
Trigger: CATTAAAAGCCTCCTGAAGCATAATCTTATCAAAGG...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGTCCTTCAGCTGTATCTaGACTATGTCTGTAGTGAAA +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVSFSCI*TMSVVK
Trigger: TTTCACTACAGACATAGTCCAGATACAGCTGAAGGA...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAAGCCTCCAACTGTCTTaGAACCTCCCTGGATCTACA +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQSLQLS*NLPGST
Trigger: TGTAGATCCAGGGAGGTTCCAAGACAGTTGGAGGCT...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGATTATCCATGAGGTCTaGCCTGGATCTGGCACGATG +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMIIHEV*PGSGTM
Trigger: CATCGTGCCAGATCCAGGCCAGACCTCATGGATAAT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGAGTTCAAGGCTGCACTaGCTCGCAGTCTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMSSRLH*LAVSFP
Trigger: AGGAAAAGAGACTGCGAGCCAGTGCAGCCTTGAACT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAAGTTCAAGGCTGCACTaGCTCGCAGTCTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQSSRLH*LAVSFP
Trigger: AGGAAAAGAGACTGCGAGCCAGTGCAGCCTTGAACT...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAAGAAATTCTGTAAACTaGCAACCTACAACCGTGAGC +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIRNSVN*QPTTVS
Trigger: GCTCACGGTTGTAGGTTGCCAGTTTACAGAATTTCT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATCCCTTGTCTCCAAGGTaGGATAACGCTGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHPLSPR*DNAGFI
Trigger: GATGAAACCAGCGTTATCCCACCTTGGAGACAAGGG...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGCCACTTATCCAAATCTaGTGTACGAACATTACGACA +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVPLIQI*CTNITT
Trigger: TGTCGTAATGTTCGTACACCAGATTTGGATAAGTGG...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTCAGATGGTTAGACTGTaGCGTCAAATAGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSQMVRL*RQIVAC
Trigger: ACAAGCCACTATTTGACGCCACAGTCTAACCATCTG...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGTGCTTGGTGTTAATCTaGACTCAAAACTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRCLVLI*TQNCWP
Trigger: AGGCCAACAGTTTTGAGTCCAGATTAACACCAAGCA...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATATGCTTGGTGTTAATCTaGACTCAAAACTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVICLVLI*TQNCWP
Trigger: AGGCCAACAGTTTTGAGTCCAGATTAACACCAAGCA...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGACCTCCAGTTCCAGATaGAAGACCTCCTGCATCATG +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMTSSSR*KTSCIM
Trigger: CATGATGCAGGAGGTCTTCCATCTGGAACTGGAGGT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296782.9
ENST00000357387.8
CDS-3UTR CCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGAGTAACTCTGACATTTaGTTCTCTGGAAAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVSNSDI*FSGKAV
Trigger: AACTGCCTTTCCAGAGAACCAAATGTCAGAGTTACT...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACGAAGCATTGAGCCACTaGACAATATCCTTTACTAGA +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHEALSH*TISFTR
Trigger: TCTAGTAAAGGATATTGTTCAGTGGCTCAATGCTTC...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAAGTGCTTGGGATAGATaGAAGTTCATTACAGAGTTG +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVISAWDR*KFITEL
Trigger: CAACTCTGTAATGAACTTTCATCTATCCCAAGCACT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGCATGAAGATTGGCCTTGTCTTCACATGCTTCATCGAGGATATCAAGAGCTTCAGTGCTTGGGATAGATaGAAGTTCATTACAGAGTTG +
Preference number: 4 (lower is better)
Translates to: SMKIGLVFTCFIEDIKSFSAWDR*KFITEL
Trigger: CAACTCTGTAATGAACTTTCATCTATCCCAAGCACT...GAAGCTCTTGATATCCTCGATGAAGCATGTGAAGACAAGGCCAATCTTCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGGGTCATCCTCCAATATaGACATACTCGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMGHPPI*TYSMAQ
Trigger: CTGTGCCATCGAGTATGTTCATATTGGAGGATGACC...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGTTCAGAAATAACTTGTaGAGGGTGCTTCTGCATATC +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRFRNNL*RVLLHI
Trigger: GATATGCAGAAGCACCCTTCACAAGTTATTTCTGAA...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTACATTAAGAAAAACGTaGAAGGGCCAAAGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSTLRKT*KGQSSL
Trigger: GAGGGAACTTTGGCCCTTTCACGTTTTTCTTAATGT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACGTCAAAGAGGTGTTATaGAGTGAGATGAAATGCTTC +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHVKEVL*SEMKCF
Trigger: GAAGCATTTCATCTCACTTCATAACACCTCTTTGAC...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGCATGAAGATTGGCCTTGTCTTCACATGCTTCATCGAGGATATCAAGAGCTTCGTCAAAGAGGTGTTATaGAGTGAGATGAAATGCTTC +
Preference number: 4 (lower is better)
Translates to: SMKIGLVFTCFIEDIKSFVKEVL*SEMKCF
Trigger: GAAGCATTTCATCTCACTTCATAACACCTCTTTGAC...GAAGCTCTTGATATCCTCGATGAAGCATGTGAAGACAAGGCCAATCTTCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACATAAGAACAATTCACTaGAGTGCAGTCAAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHIRTIH*SAVKEV
Trigger: CACCTCTTTGACTGCACTTCAGTGAATTGTTCTTAT...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CTCTTCAGATTCAAGAAGAAATTCTGTAAACTGGCAACCTACAACCGTGAGCTGATAACCACAAAGCTCTaGGTATCTCCCCAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: LFRFKKKFCKLATYNRELITTKL*VSPQSK
Trigger: CTTACTTTGGGGAGATACTCAGAGCTTTGTGGTTAT...CAGCTCACGGTTGTAGGTTGCCAGTTTACAGAATTTCTTCTTGAATCTGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACAACTTAAGGCTTTCATaGACCTGCTTGGTGTTAATC +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHNLRLS*TCLVLI
Trigger: GATTAACACCAAGCAGGTTCATGAAAGCCTTAAGTT...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAAACTTAAGGCTTTCATaGACCTGCTTGGTGTTAATC +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVINLRLS*TCLVLI
Trigger: GATTAACACCAAGCAGGTTCATGAAAGCCTTAAGTT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGCTGAAAAACTCAGCTTaGATTATCTCAAGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVLKNSA*IISSSR
Trigger: TCTAGAGCTTGAGATAATTCAAGCTGAGTTTTTCAG...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCATGCAGAGAGTATCAGTaGCAAATAATTATCCATGAG +
Preference number: 4 (lower is better)
Translates to: ASTPTVSREGLELIELMPCREYQ*QIIIHE
Trigger: CTCATGGATAATTATTTGGCACTGATACTCTCTGCA...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATAGATGTTTGCGACTATaGCTCACAGCATCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHRCLRL*LTASQL
Trigger: CAACTGGGATGCTGTGAGGCATAGTCGCAAACATCT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGTGCTTTAAGGGACTGTaGTCTTCTAGGAAGCGTATG +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKCFKGL*SSRKRM
Trigger: CATACGCTTCCTAGAAGAGCACAGTCCCTTAAAGCA...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTATGCTTTAAGGGACTGTaGTCTTCTAGGAAGCGTATG +
Preference number: 4 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLCFKGL*SSRKRM
Trigger: CATACGCTTCCTAGAAGAGCACAGTCCCTTAAAGCA...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGTGCATCATGGGCAAATaGTCTTGCACCTCGATCATC +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMCIMGK*SCTSII
Trigger: GATGATCGAGGTGCAAGAGCATTTGCCCATGATGCA...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGTTGCACTCAGTTGGTTaGTGGGCTGGAAACCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWLHSVG*WAGNPE
Trigger: TTCTGGGTTTCCAGCCCAGCAACCAACTGAGTGCAA...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGAACAATTCACTGAAGTaGAGTCAAAGAGGTGTTATG +
Preference number: 4 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVNNSLK*SQRGVM
Trigger: CATAACACCTCTTTGACTGCACTTCAGTGAATTGTT...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CTCTTCAGATTCAAGAAGAAATTCTGTAAACTGGCAACCTACAACCGTGAGCTGACTCCTATTAGAGACTaGATCCCAGAATTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LFRFKKKFCKLATYNRELTPIRD*IPEFPG
Trigger: ACCTGGAAATTCTGGGATCCAGTCTCTAATAGGAGT...CAGCTCACGGTTGTAGGTTGCCAGTTTACAGAATTTCTTCTTGAATCTGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCAAAAATCCTTTTGGAATaGAGAGAAATCTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ASTPTVSREGLELIELMPKILLE*REISAG
Trigger: TCCTGCTGAGATTTCTCTCCATTCCAAAAGGATTTT...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATATCAAGTCAACATATTTaGAGTTGTATTCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVISSQHI*SCIPCA
Trigger: GGCACAGGGAATACAACTCCAAATATGTTGACTTGA...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGTTGGAGAGAGACAGATaGTTAGACTGTGGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKLERDR*LDCGVK
Trigger: TTTGACGCCACAGTCTAACCATCTGTCTCTCTCCAA...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTAGTTGGTTGCTGGGCTaGAAACCCAGAATTTCAATA +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSSWLLG*KPRISI
Trigger: TATTGAAATTCTGGGTTTCCAGCCCAGCAACCAACT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGTATAGGTTGCTTTGGTaGTGTTGCCAACACAGCCTC +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMYRLLW*CCQHSL
Trigger: GAGGCTGTGTTGGCAACACCACCAAAGCAACCTATA...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAAGTAACTCTGACATTTaGTTCTCTGGAAAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVISNSDI*FSGKAV
Trigger: AACTGCCTTTCCAGAGAACCAAATGTCAGAGTTACT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp TATCCCTTTGATAAGATTATGCTTCAGGAGGCTTTTAATGCCCTTGACATAAACTACTGGAGTCTTGGATaGGATATCGAAGCGCTCGTA +
Preference number: 4 (lower is better)
Translates to: YPFDKIMLQEAFNALDINYWSLG*DIEALV
Trigger: TACGAGCGCTTCGATATCTCATCCAAGACTCCAGTA...GTTTATGTCAAGGGCATTAAAAGCCTCCTGAAGCATAATCTTATCAAAGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR TCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGCCAAATAATTATCCATaGGGTCTGGCCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWPNNYP*GLAWIW
Trigger: CCAGATCCAGGCCAGACCTCATGGATAATTATTTGG...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGGCTCTAACTGAGATATaGTCATCACTGTTTGTTATC +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRALTEI*SSLFVI
Trigger: GATAACAAACAGTGATGATCATATCTCAGTTAGAGC...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAAGATTCTCTTTATGTTaGAGGACTTGGCTATCTCTA +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIRFSLC*RTWLSL
Trigger: TAGAGATAGCCAAGTCCTTCAACATAAAGAGAATCT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGCTGGTTTCATCTGAATaGGAGCATGAAGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMLVSSE*EHEDWP
Trigger: AGGCCAATCTTCATGCTCTCATTCAGATGAAACCAG...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATCTTCCTGTAGCAAATTaGGACCCCAATTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHLPVAN*DPNLMS
Trigger: GCTCATCAAATTGGGGTCTCAATTTGCTACAGGAAG...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGGCTCTTCTTCTGCTTTaGGGTTATAAACCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKALLLL*GYKPLK
Trigger: CTTCAGAGGTTTATAACCTCAAAGCAGAAGAAGAGC...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAAATGTAAATAAGCATTaGTATCCCACTGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVINVNKH*YPTAEH
Trigger: GTGTTCAGCAGTGGGATATCAATGCTTATTTACATT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAGATAATGGCAATGCATaGTCGGACCATTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQDNGNA*SDHSVS
Trigger: AGAGACAGAATGGTCCGAGCATGCATTGCCATTATC...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACTGCAGAGAGTATCAGTaGCAAATAATTATCCATGAG +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHCREYQ*QIIIHE
Trigger: CTCATGGATAATTATTTGGCACTGATACTCTCTGCA...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACTCCATTACGAATAAATaGAGAGAGTATCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHSITNK*REYQCQ
Trigger: TTGGCACTGATACTCTCTGCATTTATTCGTAATGGA...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATATCCATTACGAATAAATaGAGAGAGTATCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVISITNK*REYQCQ
Trigger: TTGGCACTGATACTCTCTGCATTTATTCGTAATGGA...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATGGCCTTGTCTTCACATaGTTCATCGAGGATATCAAG +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHGLVFT*FIEDIK
Trigger: CTTGATATCCTCGATGAAGCATGTGAAGACAAGGCC...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACGAGTTGTATTCCCTGTaGCACTTTTCCAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHELYSL*HFSNCF
Trigger: AAAACAATTGGAAAAGTGGCACAGGGAATACAACTC...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATACCAGTGTCTTCAATGTaGTTATTCCCCATAAATGAA +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIPVSSM*LFPINE
Trigger: TTCATTTATGGGGAATAAGCACATTGAAGACACTGG...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTAGTCATTTTCTCCAATaGTTGGTGTACTACCAGTGT +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSSHFLQ*LVYYQC
Trigger: ACACTGGTAGTACACCAAGCATTGGAGAAAATGACT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTAATCTTTTGCTGGAGATaGCAAAGCTTCAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLIFCWR*QSFRVR
Trigger: TCTCACTCTGAAGCTTTGGCATCTCCAGCAAAAGAT...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp TATCCCTTTGATAAGATTATGCTTCAGGAGGCTTTTAATGCCCTTGACATAAACTGCATCATGGGCAAATaGTCTTGCACCTCGATCATC +
Preference number: 4 (lower is better)
Translates to: YPFDKIMLQEAFNALDINCIMGK*SCTSII
Trigger: GATGATCGAGGTGCAAGAGCATTTGCCCATGATGCA...GTTTATGTCAAGGGCATTAAAAGCCTCCTGAAGCATAATCTTATCAAAGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp TATCCCTTTGATAAGATTATGCTTCAGGAGGCTTTTAATGCCCTTGACATAAACAGATGGAAGACCTCCTaGATCATGGGCAAATGCTCT +
Preference number: 4 (lower is better)
Translates to: YPFDKIMLQEAFNALDINRWKTS*IMGKCS
Trigger: AGAGCATTTGCCCATGATGCAGGAGGTCTTCCATCT...GTTTATGTCAAGGGCATTAAAAGCCTCCTGAAGCATAATCTTATCAAAGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAATTGCACTCAGTTGGTTaGTGGGCTGGAAACCCAGAA +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKLHSVG*WAGNPE
Trigger: TTCTGGGTTTCCAGCCCAGCAACCAACTGAGTGCAA...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTATACTCCTGTCTTTGCTaGCTAGTCAGTCGTATTTTC +
Preference number: 4 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLYSCLC*LVSRIF
Trigger: GAAAATACGACTGACTAGGCAGCAAAGACAGGAGTA...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGAGATACTCCTGTCTTTaGTGCCTAGTCAGTCGTATT +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKRYSCL*CLVSRI
Trigger: AATACGACTGACTAGGCAGCAAAGACAGGAGTATCT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACTATGTAGGTATTCAGTaGTTGGCTCTTGCATACAAT +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHYVGIQ*LALAYN
Trigger: ATTGTATGCAAGAGCCAAGCACTGAATACCTACATA...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATATATGTAGGTATTCAGTaGTTGGCTCTTGCATACAAT +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIYVGIQ*LALAYN
Trigger: ATTGTATGCAAGAGCCAAGCACTGAATACCTACATA...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACATAACTTGTGAAGGGTaGTTCTGCATATCCCATTAT +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHITCEG*FCISHY
Trigger: ATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTTTGAGGCTCTTCTTCTaGTTTGAGGTTATAAACCTC +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSLRLFF*FEVINL
Trigger: GAGGTTTATAACCTCAAAGCAGAAGAAGAGCCTCAA...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAATACAACCAGCACAACTaGCCAGATTCCTCCCAATTA +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQYNQHN*PDSSQL
Trigger: TAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTA...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGTTATGCATGCTGTGGTaGAGCTATCCGATACTTACA +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKLCMLW*SYPILT
Trigger: TGTAAGTATCGGATAGCTGCACCACAGCATGCATAA...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAATGTGCAATTTATGCATaGTGTGGTGCAGCTATCCGA +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQCAIYA*CGAAIR
Trigger: TCGGATAGCTGCACCACAGCATGCATAAATTGCACA...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGAGAATACTGGAGTCTTaGATGAGATATCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKRILES*MRYRSA
Trigger: AGCGCTTCGATATCTCATCCAAGACTCCAGTATTCT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGACTCCTATTAGAGACTaGATCCCAGAATTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKTPIRD*IPEFPG
Trigger: ACCTGGAAATTCTGGGATCCAGTCTCTAATAGGAGT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAAAAATCCTTTTGGAATaGAGAGAAATCTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIKILLE*REISAG
Trigger: TCCTGCTGAGATTTCTCTCCATTCCAAAAGGATTTT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGATCATCTGGAACCACTaGCCACAGATGTTTGCGACT +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWIIWNH*PQMFAT
Trigger: AGTCGCAAACATCTGTGGCCAGTGGTTCCAGATGAT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGTATGAACATACTCGATaGCACAGATTCACTTTCACT +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRYEHTR*HRFTFT
Trigger: AGTGAAAGTGAATCTGTGCCATCGAGTATGTTCATA...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAACTTCTAAAGGATTATaGATAGTCTGCTCACACCAA +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVITSKGL*IVCSHQ
Trigger: TTGGTGTGAGCAGACTATCCATAATCCTTTAGAAGT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGTATAGGTTGCTTTGGTaGTGTTGCCAACACAGCCTC +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWYRLLW*CCQHSL
Trigger: GAGGCTGTGTTGGCAACACCACCAAAGCAACCTATA...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAAACTATAGGTTGCTTTaGTGGTGTTGCCAACACAGC +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQNYRLL*WCCQHS
Trigger: GCTGTGTTGGCAACACCACCAAAGCAACCTATAGTT...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAATACTGGAGTCTTGGATaGGATATCGAAGCGCTCGTA +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKYWSLG*DIEALV
Trigger: TACGAGCGCTTCGATATCTCATCCAAGACTCCAGTA...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGCTTCTCTGTCTTCTTTaGGCTGTCCTTCAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWLLCLL*AVLQLY
Trigger: ATACAGCTGAAGGACAGCTCAAAGAAGACAGAGAAG...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAACCAAATAATTATCCATaGGGTCTGGCCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKPNNYP*GLAWIW
Trigger: CCAGATCCAGGCCAGACCTCATGGATAATTATTTGG...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTGCTCTAACTGAGATATaGTCATCACTGTTTGTTATC +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSALTEI*SSLFVI
Trigger: GATAACAAACAGTGATGATCATATCTCAGTTAGAGC...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTAGATTCTCTTTATGTTaGAGGACTTGGCTATCTCTA +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSRFSLC*RTWLSL
Trigger: TAGAGATAGCCAAGTCCTTCAACATAAAGAGAATCT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGACAGCATCCCAGTTGTaGCATTTTAGAATATCACAG +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKTASQL*HFRISQ
Trigger: CTGTGATATTCTAAAATGTCACAACTGGGATGCTGT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAGGTCATCCTCCAATATaGACATACTCGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKGHPPI*TYSMAQ
Trigger: CTGTGCCATCGAGTATGTTCATATTGGAGGATGACC...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp TATCCCTTTGATAAGATTATGCTTCAGGAGGCTTTTAATGCCCTTGACATAAACGCCAAAGCTTCAGAGTaGGATAAGGATGGATGCATT +
Preference number: 4 (lower is better)
Translates to: YPFDKIMLQEAFNALDINAKASE*DKDGCI
Trigger: AATGCATCCATCCTTATCTCACTCTGAAGCTTTGGC...GTTTATGTCAAGGGCATTAAAAGCCTCCTGAAGCATAATCTTATCAAAGGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR TCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATGCTCTTCTTCTGCTTTaGGGTTATAAACCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHALLLL*GYKPLK
Trigger: CTTCAGAGGTTTATAACCTCAAAGCAGAAGAAGAGC...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGATAAGAACAATTCACTaGAGTGCAGTCAAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKIRTIH*SAVKEV
Trigger: CACCTCTTTGACTGCACTTCAGTGAATTGTTCTTAT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAATAACCACAAAGCTCTaGGTATCTCCCCAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQITTKL*VSPQSK
Trigger: CTTACTTTGGGGAGATACTCAGAGCTTTGTGGTTAT...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAATTGATATCCCACTGCTaGACACTTGGCCGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKLISHC*TLGRCD
Trigger: ATCACAACGGCCAAGTGTTCAGCAGTGGGATATCAA...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTACTGGTGTGTTGCAATTaGTTTCTGAATAATGTGGTC +
Preference number: 4 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLLVCCN*FLNNVV
Trigger: GACCACATTATTCAGAAAGCAATTGCAACACACCAG...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGAGTCATTTTCTCCAATaGTTGGTGTACTACCAGTGT +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKSHFLQ*LVYYQC
Trigger: ACACTGGTAGTACACCAAGCATTGGAGAAAATGACT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAATCTTTTGCTGGAGATaGCAAAGCTTCAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQIFCWR*QSFRVR
Trigger: TCTCACTCTGAAGCTTTGGCATCTCCAGCAAAAGAT...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATTACTCCTGTCTTTGCTaGCTAGTCAGTCGTATTTTC +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHYSCLC*LVSRIF
Trigger: GAAAATACGACTGACTAGGCAGCAAAGACAGGAGTA...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGTCATGTACCAGTAACTaGGGAACAGTGTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMSCTSN*GTVYRR
Trigger: TCTTCTGTACACTGTTCCGCAGTTACTGGTACATGA...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGTGTGAAGGGTGCTTCTaGATATCCCATTATTGTTCC +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMCEGCF*ISHYCS
Trigger: GGAACAATAATGGGATATGCAGAAGCACCCTTCACA...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp CTCTTCAGATTCAAGAAGAAATTCTGTAAACTGGCAACCTACAACCGTGAGCTGATAACTTGTGAAGGGTaGTTCTGCATATCCCATTAT +
Preference number: 4 (lower is better)
Translates to: LFRFKKKFCKLATYNRELITCEG*FCISHY
Trigger: ATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT...CAGCTCACGGTTGTAGGTTGCCAGTTTACAGAATTTCTTCTTGAATCTGAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGATTGTGGTAATAGGATaGAGCCTTAGAGACACTGAT +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKIVVIG*SLRDTD
Trigger: ATCAGTGTCTCTAAGGCTGCATCCTATTACCACAAT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGCCTGTAATAACACATTaGAACAAAATGAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRPVITH*NKMKSW
Trigger: CCAACTCTTCATTTTGTTGCAATGTGTTATTACAGG...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGAATCTGGCCACATTTTaGAGAATCTCTCTTAAGTTA +
Preference number: 4 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRNLATF*RISLKL
Trigger: TAACTTAAGAGAGATTCTCCAAAATGTGGCCAGATT...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAATACTCCCTGCAATCTaGCCACATTTTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQILPAI*PHFGES
Trigger: AGATTCTCCAAAATGTGGCCAGATTGCAGGGAGTAT...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAACTCCTATTAGAGACTaGATCCCAGAATTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQTPIRD*IPEFPG
Trigger: ACCTGGAAATTCTGGGATCCAGTCTCTAATAGGAGT...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGGCAGTCTCTTTTCCTTaGGGATATCAAAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWAVSFP*GYQRMQ
Trigger: CTGCATCCTTTGATATCCCCAAGGAAAAGAGACTGC...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGAATCCAGATCCAGGTTaGCATATAATTTACTGCTGG +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKNPDPG*HIIYCW
Trigger: CCAGCAGTAAATTATATGCCAACCTGGATCTGGATT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAATTGTTCCACATCATCTaGAACCACTGGCCACAGATG +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKLFHII*NHWPQM
Trigger: CATCTGTGGCCAGTGGTTCCAGATGATGTGGAACAA...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGATTTTCTCCAATGCTTaGTGTACTACCAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKIFSNA*CTTSVF
Trigger: GAAGACACTGGTAGTACACCAAGCATTGGAGAAAAT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTAATTTTCTCCAATGCTTaGTGTACTACCAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLIFSNA*CTTSVF
Trigger: GAAGACACTGGTAGTACACCAAGCATTGGAGAAAAT...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATAGTTGGTTGCTGGGCTaGAAACCCAGAATTTCAATA +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHSWLLG*KPRISI
Trigger: TATTGAAATTCTGGGTTTCCAGCCCAGCAACCAACT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTACTTCTAAAGGATTATaGATAGTCTGCTCACACCAA +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSTSKGL*IVCSHQ
Trigger: TTGGTGTGAGCAGACTATCCATAATCCTTTAGAAGT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTAGAAGGAAGTTGTTTTaGTTAGGAAAGTCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSRRKLF*LGKSAV
Trigger: AACTGCTGACTTTCCTAACCAAAACAACTTCCTTCT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACTTTAAAGCGATGAGATaGAAAGTTGATGAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHFKAMR*KVDESG
Trigger: TCCACTTTCATCAACTTTCCATCTCATCGCTTTAAA...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATATTTAAAGCGATGAGATaGAAAGTTGATGAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIFKAMR*KVDESG
Trigger: TCCACTTTCATCAACTTTCCATCTCATCGCTTTAAA...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AGCATGAAGATTGGCCTTGTCTTCACATGCTTCATCGAGGATATCAAGAGCTTCTTTAAAGCGATGAGATaGAAAGTTGATGAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: SMKIGLVFTCFIEDIKSFFKAMR*KVDESG
Trigger: TCCACTTTCATCAACTTTCCATCTCATCGCTTTAAA...GAAGCTCTTGATATCCTCGATGAAGCATGTGAAGACAAGGCCAATCTTCATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGAATTTATGCATGCTGTaGTGCAGCTATCCGATACTT +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKNLCML*CSYPIL
Trigger: AAGTATCGGATAGCTGCACCACAGCATGCATAAATT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAACTTTCTCCTGCATCATaGGCAAATGCTCTTGCACCT +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKLSPAS*ANALAP
Trigger: AGGTGCAAGAGCATTTGCCCATGATGCAGGAGAAAG...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAACCACCTCTGGATTCTaGAGTGCTAGTTCACAGATA +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKTTSGF*SASSQI
Trigger: TATCTGTGAACTAGCACTTCAGAATCCAGAGGTGGT...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATGATGGTAGCTCTAACTaGGATATGATCATCACTGTT +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHDGSSN*DMIITV
Trigger: AACAGTGATGATCATATCTCAGTTAGAGCTACCATC...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGGATGGTAGCTCTAACTaGGATATGATCATCACTGTT +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMDGSSN*DMIITV
Trigger: AACAGTGATGATCATATCTCAGTTAGAGCTACCATC...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATTTCAGAAATAACTTGTaGAGGGTGCTTCTGCATATC +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHFRNNL*RVLLHI
Trigger: GATATGCAGAAGCACCCTTCACAAGTTATTTCTGAA...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGTCCTGTTTAAAGCGATaGGATGGAAAGTTGATGAAA +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKSCLKR*DGKLMK
Trigger: TTTCATCAACTTTCCATCTCATCGCTTTAAACAGGA...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAACGTTGTGATATGCCCTaGAAAACTCAGCTTGAATTA +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQRCDMP*KTQLEL
Trigger: TAATTCAAGCTGAGTTTTTCAGGGCATATCACAACG...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAATCAATGTCTGTTCAGTaGCCTACAAACACCAGAACC +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKSMSVQ*PTNTRT
Trigger: GGTTCTGGTGTTTGTAGGTCACTGAACAGACATTGA...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATCTGGTGTGTTGCAATTaGTTTCTGAATAATGTGGTC +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHLVCCN*FLNNVV
Trigger: GACCACATTATTCAGAAAGCAATTGCAACACACCAG...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGCCGGTAAGTAGTAAGTaGTTCATTGAGTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWPVSSK*FIELFL
Trigger: GAGGAACAACTCAATGAAGCACTTACTACTTACCGG...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGTACTCCTGTCTTTGCTaGCTAGTCAGTCGTATTTTC +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWYSCLC*LVSRIF
Trigger: GAAAATACGACTGACTAGGCAGCAAAGACAGGAGTA...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGTATGTAGGTATTCAGTaGTTGGCTCTTGCATACAAT +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKYVGIQ*LALAYN
Trigger: ATTGTATGCAAGAGCCAAGCACTGAATACCTACATA...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGTGTGAAGGGTGCTTCTaGATATCCCATTATTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWCEGCF*ISHYCS
Trigger: GGAACAATAATGGGATATGCAGAAGCACCCTTCACA...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTAACAAACAAAAACCTTaGCCTCATCAACTTAACTTC +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSNKQKP*PHQLNF
Trigger: GAAGTTAAGTTGATGAGGGCAAGGTTTTTGTTTGTT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGATACTCCCTGCAATCTaGCCACATTTTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWILPAI*PHFGES
Trigger: AGATTCTCCAAAATGTGGCCAGATTGCAGGGAGTAT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATAATTTTAGCACCTTCTaGAGAATACTGGAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHNFSTF*RILESW
Trigger: CCAAGACTCCAGTATTCTCCAGAAGGTGCTAAAATT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAATCCTTCAGCTGTATCTaGACTATGTCTGTAGTGAAA +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQSFSCI*TMSVVK
Trigger: TTTCACTACAGACATAGTCCAGATACAGCTGAAGGA...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAGCAGTCTCTTTTCCTTaGGGATATCAAAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKAVSFP*GYQRMQ
Trigger: CTGCATCCTTTGATATCCCCAAGGAAAAGAGACTGC...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGAGAAATTCTGTAAACTaGCAACCTACAACCGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWRNSVN*QPTTVS
Trigger: GCTCACGGTTGTAGGTTGCCAGTTTACAGAATTTCT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGCCACTTATCCAAATCTaGTGTACGAACATTACGACA +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMPLIQI*CTNITT
Trigger: TGTCGTAATGTTCGTACACCAGATTTGGATAAGTGG...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATCCACTTATCCAAATCTaGTGTACGAACATTACGACA +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHPLIQI*CTNITT
Trigger: TGTCGTAATGTTCGTACACCAGATTTGGATAAGTGG...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTATATGAACATACTCGATaGCACAGATTCACTTTCACT +
Preference number: 4 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLYEHTR*HRFTFT
Trigger: AGTGAAAGTGAATCTGTGCCATCGAGTATGTTCATA...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATATTTTCTCCAATGCTTaGTGTACTACCAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHIFSNA*CTTSVF
Trigger: GAAGACACTGGTAGTACACCAAGCATTGGAGAAAAT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTAGAGAGGCATCTGAATaGATTGAATTCATTATTTCC +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSREASE*IEFIIS
Trigger: GGAAATAATGAATTCAATCCATTCAGATGCCTCTCT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296782.9
ENST00000357387.8
CDS-3UTR CCA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGACTTCTAAAGGATTATaGATAGTCTGCTCACACCAA +
Preference number: 4 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKTSKGL*IVCSHQ
Trigger: TTGGTGTGAGCAGACTATCCATAATCCTTTAGAAGT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATAGTAACTCTGACATTTaGTTCTCTGGAAAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHSNSDI*FSGKAV
Trigger: AACTGCCTTTCCAGAGAACCAAATGTCAGAGTTACT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTAAGAAGAAACTCATGTaGTTAGAGAGCATTAAGTCT +
Preference number: 4 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSKKKLM*LESIKS
Trigger: AGACTTAATGCTCTCTAACCACATGAGTTTCTTCTT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
3UTR CAA 72 bp TCATCGAGGATATCAAGAGCTTCAGAGGAAATCGTTTaGTTTTTATCATGTAGCTGGGTCACTAACAACTCA +
Preference number: 4 (lower is better)
Translates to: SSRISRASEEIV*FLSCSWVTNNS
Trigger: TGAGTTGTTAGTGACCCAGCTACATGATAAAAACAAAACGATTTCCTCTGAAGCTCTTGATATCCTCGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CAA 72 bp AACAGGCTTCCGGTAAGTAGTAAGTGCTTCATTGAGTaGTTCCTCAATCAAGTCAACATATTTGGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: NRLPVSSKCFIE*FLNQVNIFGVV
Trigger: TACAACTCCAAATATGTTGACTTGATTGAGGAACAACTCAATGAAGCACTTACTACTTACCGGAAGCCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CAA 72 bp AGCTCGTTGAACTTTCTACTACTAACCTCTCTCGGCTaGTATTTTCTCTGTGATTCTCTGTACCAAAATTCT +
Preference number: 4 (lower is better)
Translates to: SSLNFLLLTSLG*YFLCDSLYQNS
Trigger: AGAATTTTGGTACAGAGAATCACAGAGAAAATACAAGCCGAGAGAGGTTAGTAGTAGAAAGTTCAACGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511516.5
3UTR CAA 72 bp CTCATTGAACTTATGCCACTTGTTGTAGTGTCTGTATaGAAACTTTGGCTACGTATCTTCATATGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LIELMPLVVVSV*KLWLRIFICEL
Trigger: GAGCTCACATATGAAGATACGTAGCCAAAGTTTCAATACAGACACTACAACAAGTGGCATAAGTTCAATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR TCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGAATAATACCTGCCCATaGTCGGAATGTTGCTATGAT +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWNNTCP*SECCYD
Trigger: ATCATAGCAACATTCCGATCATGGGCAGGTATTATT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAAGATTAAGGAGACACTaGAATACACTGCATTTTTCC +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQRLRRH*NTLHFS
Trigger: GGAAAAATGCAGTGTATTTCAGTGTCTCCTTAATCT...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR TCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGAGTGCTTGGGATAGATaGAAGTTCATTACAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWSAWDR*KFITEL
Trigger: CAACTCTGTAATGAACTTTCATCTATCCCAAGCACT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAGAAATAATTCTTGTATaGACCTCCGACACGGAAGTC +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKEIILV*TSDTEV
Trigger: GACTTCCGTGTCGGAGGTTCATACAAGAATTATTTC...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp TATCCCTTTGATAAGATTATGCTTCAGGAGGCTTTTAATGCCCTTGACATAAACTGTTATGAAGTGAGATaGAATGCTTCATCCCAACTG +
Preference number: 4 (lower is better)
Translates to: YPFDKIMLQEAFNALDINCYEVR*NASSQL
Trigger: CAGTTGGGATGAAGCATTTCATCTCACTTCATAACA...GTTTATGTCAAGGGCATTAAAAGCCTCCTGAAGCATAATCTTATCAAAGGGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAATAACCACAAAGCTCTaGGTATCTCCCCAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKITTKL*VSPQSK
Trigger: CTTACTTTGGGGAGATACTCAGAGCTTTGTGGTTAT...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAATGCAGAGAGTATCAGTaGCAAATAATTATCCATGAG +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQCREYQ*QIIIHE
Trigger: CTCATGGATAATTATTTGGCACTGATACTCTCTGCA...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATCCAGTGTCTTCAATGTaGTTATTCCCCATAAATGAA +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHPVSSM*LFPINE
Trigger: TTCATTTATGGGGAATAAGCACATTGAAGACACTGG...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGCCAGTGTCTTCAATGTaGTTATTCCCCATAAATGAA +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMPVSSM*LFPINE
Trigger: TTCATTTATGGGGAATAAGCACATTGAAGACACTGG...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGATAACTTGTGAAGGGTaGTTCTGCATATCCCATTAT +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMITCEG*FCISHY
Trigger: ATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGATTGTGGTAATAGGATaGAGCCTTAGAGACACTGAT +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWIVVIG*SLRDTD
Trigger: ATCAGTGTCTCTAAGGCTGCATCCTATTACCACAAT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAAAAATGTGCAATTTATaGATGCTGTGGTGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQKMCNL*MLWCSY
Trigger: ATAGCTGCACCACAGCATGCATAAATTGCACATTTT...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATCCATTTGTTTTACAATaGAGCTTTAGGGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHPFVLQ*SFRVSD
Trigger: GTCAGAAACCCTAAAGCTGCATTGTAAAACAAATGG...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAATACTCCCTGCAATCTaGCCACATTTTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKILPAI*PHFGES
Trigger: AGATTCTCCAAAATGTGGCCAGATTGCAGGGAGTAT...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGAATTTTAGCACCTTCTaGAGAATACTGGAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWNFSTF*RILESW
Trigger: CCAAGACTCCAGTATTCTCCAGAAGGTGCTAAAATT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGAAAATCCTTTTGGAATaGAGAGAAATCTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMKILLE*REISAG
Trigger: TCCTGCTGAGATTTCTCTCCATTCCAAAAGGATTTT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATTATGAACATACTCGATaGCACAGATTCACTTTCACT +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHYEHTR*HRFTFT
Trigger: AGTGAAAGTGAATCTGTGCCATCGAGTATGTTCATA...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGGAGTATACGGCACATTaGTGTATCATCTGGAATTGT +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWEYTAH*CIIWNC
Trigger: ACAATTCCAGATGATACACCAATGTGCCGTATACTC...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGACCGCAAACAAATTATaGTATCCTCATAGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWTANKL*YPHSES
Trigger: GCTTTCACTATGAGGATATCATAATTTGTTTGCGGT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp TATCCCTTTGATAAGATTATGCTTCAGGAGGCTTTTAATGCCCTTGACATAAACACCGCAAACAAATTATaGTATCCTCATAGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: YPFDKIMLQEAFNALDINTANKL*YPHSES
Trigger: GCTTTCACTATGAGGATATCATAATTTGTTTGCGGT...GTTTATGTCAAGGGCATTAAAAGCCTCCTGAAGCATAATCTTATCAAAGGGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAAATAATACCTGCCCATaGTCGGAATGTTGCTATGAT +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKNNTCP*SECCYD
Trigger: ATCATAGCAACATTCCGATCATGGGCAGGTATTATT...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAGAAGCATTGAGCCACTaGACAATATCCTTTACTAGA +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKEALSH*TISFTR
Trigger: TCTAGTAAAGGATATTGTTCAGTGGCTCAATGCTTC...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp TATCCCTTTGATAAGATTATGCTTCAGGAGGCTTTTAATGCCCTTGACATAAACTCCTGTTTAAAGCGATaGGATGGAAAGTTGATGAAA +
Preference number: 4 (lower is better)
Translates to: YPFDKIMLQEAFNALDINSCLKR*DGKLMK
Trigger: TTTCATCAACTTTCCATCTCATCGCTTTAAACAGGA...GTTTATGTCAAGGGCATTAAAAGCCTCCTGAAGCATAATCTTATCAAAGGGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR GCA 90 bp TATCCCTTTGATAAGATTATGCTTCAGGAGGCTTTTAATGCCCTTGACATAAACAACAATTCACTGAAGTaGAGTCAAAGAGGTGTTATG +
Preference number: 4 (lower is better)
Translates to: YPFDKIMLQEAFNALDINNNSLK*SQRGVM
Trigger: CATAACACCTCTTTGACTGCACTTCAGTGAATTGTT...GTTTATGTCAAGGGCATTAAAAGCCTCCTGAAGCATAATCTTATCAAAGGGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATAATCTGGCCACATTTTaGAGAATCTCTCTTAAGTTA +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHNLATF*RISLKL
Trigger: TAACTTAAGAGAGATTCTCCAAAATGTGGCCAGATT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAATCAAGTCAACATATTTaGAGTTGTATTCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKSSQHI*SCIPCA
Trigger: GGCACAGGGAATACAACTCCAAATATGTTGACTTGA...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATAGAGAGGCATCTGAATaGATTGAATTCATTATTTCC +
Preference number: 4 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHREASE*IEFIIS
Trigger: GGAAATAATGAATTCAATCCATTCAGATGCCTCTCT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296782.9
ENST00000357387.8
CDS-3UTR CCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAGAGTATACGGCACATTaGTGTATCATCTGGAATTGT +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKEYTAH*CIIWNC
Trigger: ACAATTCCAGATGATACACCAATGTGCCGTATACTC...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGAGAAGGAAGTTGTTTTaGTTAGGAAAGTCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWRRKLF*LGKSAV
Trigger: AACTGCTGACTTTCCTAACCAAAACAACTTCCTTCT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAGCTCTAACTGAGATATaGTCATCACTGTTTGTTATC +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKALTEI*SSLFVI
Trigger: GATAACAAACAGTGATGATCATATCTCAGTTAGAGC...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR TCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAAGATTAAGGAGACACTaGAATACACTGCATTTTTCC +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKRLRRH*NTLHFS
Trigger: GGAAAAATGCAGTGTATTTCAGTGTCTCCTTAATCT...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAAGAAGGAAGTTGTTTTaGTTAGGAAAGTCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKRRKLF*LGKSAV
Trigger: AACTGCTGACTTTCCTAACCAAAACAACTTCCTTCT...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
3UTR CAA 72 bp ATATTTGGAGTTGTATTCCCTGTGCCACTTTTCCAATaGTTTTGCTACATAACCTCTTTCATTCAGATAGGA +
Preference number: 4 (lower is better)
Translates to: IFGVVFPVPLFQ*FCYITSFIQIG
Trigger: TCCTATCTGAATGAAAGAGGTTATGTAGCAAAACAATTGGAAAAGTGGCACAGGGAATACAACTCCAAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR GCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAACCTGTAATAACACATTaGAACAAAATGAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKPVITH*NKMKSW
Trigger: CCAACTCTTCATTTTGTTGCAATGTGTTATTACAGG...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR GCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAAACAAACAAAAACCTTaGCCTCATCAACTTAACTTC +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKNKQKP*PHQLNF
Trigger: GAAGTTAAGTTGATGAGGGCAAGGTTTTTGTTTGTT...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CCA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAAATCTGAGACAAAAGTaGAAGCATAAGACTAAAGGA +
Preference number: 4 (lower is better)
Translates to: KAINILINPPTTAFSLCKNLRQK*KHKTKG
Trigger: TCCTTTAGTCTTATGCTTCCACTTTTGTCTCAGATT...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGAAGCCTCCAACTGTCTaGGAACCTCCCTGGATCTAC +
Preference number: 5 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEKPPTV*EPPWIY
Trigger: GTAGATCCAGGGAGGTTCCAAGACAGTTGGAGGCTT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGACTGGCCACAGATGTTaGCGACTATGCCTCACAGCA +
Preference number: 5 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGETGHRC*RLCLTA
Trigger: TGCTGTGAGGCATAGTCGCAAACATCTGTGGCCAGT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGGTTGCTTTGGTGGTGTaGCCAACACAGCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEVALVV*PTQPLL
Trigger: AAGCAGAGGCTGTGTTGGCAACACCACCAAAGCAAC...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGACTAGCTTTCTCATATTaGATACTCCCTGCAATCTGG +
Preference number: 5 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRLAFSY*ILPAIW
Trigger: CCAGATTGCAGGGAGTATCAAATATGAGAAAGCTAG...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGACAACCGTGAGCTGTTaGGCCTTGGCAAAATCCAGA +
Preference number: 5 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGETTVSC*ALAKSR
Trigger: TCTGGATTTTGCCAAGGCCAAACAGCTCACGGTTGT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGAAAGGACTTGAGCTCATaGAACTTATGCCACTTGTTG +
Preference number: 5 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRKDLSS*NLCHLL
Trigger: CAACAAGTGGCATAAGTTCAATGAGCTCAAGTCCTT...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGCTTATAAGTCCCGGGTaGTTGAGGCTCTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGELISPG*LRLFFC
Trigger: GCAGAAGAAGAGCCTCAACAACCCGGGACTTATAAG...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATACCGATCGCCGCCATATaGACGGGTTTCAGTCACAAC +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIPIAAI*TGFSHN
Trigger: GTTGTGACTGAAACCCGTCAATATGGCGGCGATCGG...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296782.9
ENST00000357387.8
CDS TCA 90 bp CCACTTTCAATTTTAGCACCTTCTGGAGAATACTGGAGTCTTGGATaGGATATCGAAGCGCTCGTAGCCCTGCTGCTCGCACTTCTTTTG +
Preference number: 5 (lower is better)
Translates to: PLSILAPSGEYWSLG*DIEALVALLLALLL
Trigger: CAAAAGAAGTGCGAGCAGCAGGGCTACGAGCGCTTCGATATCTCATCCAAGACTCCAGTATTCTCCAGAAGGTGCTAAAATTGAAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000510711.5
ENST00000511516.5
ENST00000513566.1
ENST00000514735.1
CDS-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTCCGATCGCCGCCATATaGACGGGTTTCAGTCACAAC +
Preference number: 5 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSPIAAI*TGFSHN
Trigger: GTTGTGACTGAAACCCGTCAATATGGCGGCGATCGG...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296782.9
ENST00000357387.8
CDS-3UTR CAA 90 bp GTGTCCATAGTTGTAGCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCGTCCTCTCTACCTCGTaGCTCTGTTGTATGTCAATG +
Preference number: 5 (lower is better)
Translates to: VSIVVASTPTVSREGLELVLSTS*LCCMSM
Trigger: CATTGACATACAACAGAGCAACGAGGTAGAGAGGAC...GAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGCTACAACTATGGACAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACGTGAGCTGTTTGGCCTaGGCAAAATCCAGATCCAGG +
Preference number: 5 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHVSCLA*AKSRSR
Trigger: CCTGGATCTGGATTTTGCCAAGGCCAAACAGCTCAC...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CCGGGAGAGCAAGACCAATGTAATCATCTGAACCCCCATATGTGGCACTGGACACCCTTAAATGTTTTGTaGCATAGAGTCTGCAGGCAT +
Preference number: 5 (lower is better)
Translates to: PGEQDQCNHLNPHMWHWTPLNVL*HRVCRH
Trigger: ATGCCTGCAGACTCTATGCAACAAAACATTTAAGGG...TGTCCAGTGCCACATATGGGGGTTCAGATGATTACATTGGTCTTGCTCTCCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp CTGTGCTCTTCTAGGAAGCGTATGAGAAGAACCTGGAGGCACCAGGGACACCGATCAGAGGAAATCGTTTaGTTTTTATCATGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: LCSSRKRMRRTWRHQGHRSEEIV*FLSCSW
Trigger: CCAGCTACATGATAAAAACAAAACGATTTCCTCTGA...TCGGTGTCCCTGGTGCCTCCAGGTTCTTCTCATACGCTTCCTAGAAGAGCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp ATCCATGAGGTCTGGCCTGGATCTGGCACGATGAGGAAGAATAGTTTTTGCCTCTCTCTCGTGAAGGACTaGAGCTCATTGAACTTATGC +
Preference number: 5 (lower is better)
Translates to: IHEVWPGSGTMRKNSFCLSLVKD*SSLNLC
Trigger: GCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGA...GAGGCAAAAACTATTCTTCCTCATCGTGCCAGATCCAGGCCAGACCTCATGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGACATATTGCACTCAGTaGGTTGCTGGGCTGGAAACC +
Preference number: 5 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVTYCTQ*VAGLET
Trigger: GGTTTCCAGCCCAGCAACCAACTGAGTGCAATATGT...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGGGAGTATACGGCACATaGGTGTATCATCTGGAATTG +
Preference number: 5 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEGVYGT*VYHLEL
Trigger: CAATTCCAGATGATACACCAATGTGCCGTATACTCC...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGCTTCTCTGTCTTCTTaGAGCTGTCCTTCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVASLSS*SCPSAV
Trigger: TACAGCTGAAGGACAGCTCAAAGAAGACAGAGAAGC...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGCGCAGTCTCTTTTCCTaGGGGATATCAAAGGATGCA +
Preference number: 5 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVRSLFS*GISKDA
Trigger: TGCATCCTTTGATATCCCCAAGGAAAAGAGACTGCG...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAACAACCGTGAGCTGTTaGGCCTTGGCAAAATCCAGA +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVITTVSC*ALAKSR
Trigger: TCTGGATTTTGCCAAGGCCAAACAGCTCACGGTTGT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAAGGAGAAGCAAACCCTaGTCTCCAAGGTGGGATAAC +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIRRSKP*SPRWDN
Trigger: GTTATCCCACCTTGGAGACAAGGGTTTGCTTCTCCT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTACTGGCCACAGATGTTaGCGACTATGCCTCACAGCA +
Preference number: 5 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSTGHRC*RLCLTA
Trigger: TGCTGTGAGGCATAGTCGCAAACATCTGTGGCCAGT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGCATTTTCTCCAATGCTaGGTGTACTACCAGTGTCTT +
Preference number: 5 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEHFLQC*VYYQCL
Trigger: AAGACACTGGTAGTACACCAAGCATTGGAGAAAATG...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGCTAACCTCTCTCGGCTaGTATTTTCTCTGTGATTCT +
Preference number: 5 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGELTSLG*YFLCDS
Trigger: AGAATCACAGAGAAAATACAAGCCGAGAGAGGTTAG...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGGACACCGAATTTGATTaGGAGAGAGACAGATGGTTA +
Preference number: 5 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEDTEFD*ERDRWL
Trigger: TAACCATCTGTCTCTCTCCAAATCAAATTCGGTGTC...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCATGGGCAAATGCTCTaGCACCTCGATCATCATGTG +
Preference number: 5 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHHGQML*HLDHHV
Trigger: CACATGATGATCGAGGTGCAAGAGCATTTGCCCATG...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATACATGGGCAAATGCTCTaGCACCTCGATCATCATGTG +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIHGQML*HLDHHV
Trigger: CACATGATGATCGAGGTGCAAGAGCATTTGCCCATG...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAACATATTGCACTCAGTaGGTTGCTGGGCTGGAAACC +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVITYCTQ*VAGLET
Trigger: GGTTTCCAGCCCAGCAACCAACTGAGTGCAATATGT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGAACAATTCTGTGCTTTaGGTGCTGCTAGCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVNNSVL*VLLAEP
Trigger: AGGCTCAGCTAGCAGCACCAAAAGCACAGAATTGTT...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATACTTATAAGTCCCGGGTaGTTGAGGCTCTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVILISPG*LRLFFC
Trigger: GCAGAAGAAGAGCCTCAACAACCCGGGACTTATAAG...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACTACCTCGTTGCTCTGTaGTATGTCAATGCACCTAGC +
Preference number: 5 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHYLVAL*YVNAPS
Trigger: GCTAGGTGCATTGACATACAACAGAGCAACGAGGTA...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGAAGCCTCCAACTGTCTaGGAACCTCCCTGGATCTAC +
Preference number: 5 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKKPPTV*EPPWIY
Trigger: GTAGATCCAGGGAGGTTCCAAGACAGTTGGAGGCTT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTAAAGCCTCCAACTGTCTaGGAACCTCCCTGGATCTAC +
Preference number: 5 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLKPPTV*EPPWIY
Trigger: GTAGATCCAGGGAGGTTCCAAGACAGTTGGAGGCTT...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGCCATATTCATTAGGGTaGGCAAGCAGTGTAAATGAT +
Preference number: 5 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEPYSLG*ASSVND
Trigger: ATCATTTACACTGCTTGCCAACCCTAATGAATATGG...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCGCAGTCTCTTTTCCTaGGGGATATCAAAGGATGCA +
Preference number: 5 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHRSLFS*GISKDA
Trigger: TGCATCCTTTGATATCCCCAAGGAAAAGAGACTGCG...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGAAATCCAGATCCAGGTaGGCATATAATTTACTGCTG +
Preference number: 5 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEKSRSR*AYNLLL
Trigger: CAGCAGTAAATTATATGCCAACCTGGATCTGGATTT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGGTGAGCTGTTTGGCCTaGGCAAAATCCAGATCCAGG +
Preference number: 5 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKVSCLA*AKSRSR
Trigger: CCTGGATCTGGATTTTGCCAAGGCCAAACAGCTCAC...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGATACCCTTAAATGTTTaGTTGCATAGAGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEIPLNV*LHRVCR
Trigger: CCTGCAGACTCTATGCAACAAAACATTTAAGGGTAT...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTAGGAGAAGCAAACCCTaGTCTCCAAGGTGGGATAAC +
Preference number: 5 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSRRSKP*SPRWDN
Trigger: GTTATCCCACCTTGGAGACAAGGGTTTGCTTCTCCT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGGGGAGGTGCCACTTTTCCAATaGTTTTGCTACATAACCTCT +
Preference number: 5 (lower is better)
Translates to: YFRIDDQGEGTGIVMVGEVPLFQ*FCYITS
Trigger: AGAGGTTATGTAGCAAAACAATTGGAAAAGTGGCAC...CTCCCCCACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTACATATTGCACTCAGTaGGTTGCTGGGCTGGAAACC +
Preference number: 5 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSTYCTQ*VAGLET
Trigger: GGTTTCCAGCCCAGCAACCAACTGAGTGCAATATGT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGGTTGCTTTGGTGGTGTaGCCAACACAGCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKVALVV*PTQPLL
Trigger: AAGCAGAGGCTGTGTTGGCAACACCACCAAAGCAAC...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATCCCACTGCTGAACACTaGGCCGTTGTGATATGCCCT +
Preference number: 5 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHPTAEH*AVVICP
Trigger: AGGGCATATCACAACGGCCAAGTGTTCAGCAGTGGG...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGCCCTTAAATGTTTTGTaGCATAGAGTCTGCAGGCAT +
Preference number: 5 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVPLNVL*HRVCRH
Trigger: ATGCCTGCAGACTCTATGCAACAAAACATTTAAGGG...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCATCTTCCTGTAGCAAATaGAGACCCCAATTTGATGAG +
Preference number: 5 (lower is better)
Translates to: ASTPTVSREGLELIELMPSSCSK*RPQFDE
Trigger: CTCATCAAATTGGGGTCTCAATTTGCTACAGGAAGA...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGACTGGCCACAGATGTTaGCGACTATGCCTCACAGCA +
Preference number: 5 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMTGHRC*RLCLTA
Trigger: TGCTGTGAGGCATAGTCGCAAACATCTGTGGCCAGT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCAGTTCTGATTCGCCTGTaGCTTGTCTTACTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: ASTPTVSREGLELIELMPVLIRL*LVLLSD
Trigger: ATCTGAAAGTAAGACAAGCAACAGGCGAATCAGAAC...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGCTAACCTCTCTCGGCTaGTATTTTCTCTGTGATTCT +
Preference number: 5 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVLTSLG*YFLCDS
Trigger: AGAATCACAGAGAAAATACAAGCCGAGAGAGGTTAG...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGAAGGACTTGAGCTCATaGAACTTATGCCACTTGTTG +
Preference number: 5 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVKDLSS*NLCHLL
Trigger: CAACAAGTGGCATAAGTTCAATGAGCTCAAGTCCTT...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACTCTCTCGTGAAGGACTaGAGCTCATTGAACTTATGC +
Preference number: 5 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHSLVKD*SSLNLC
Trigger: GCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGA...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGACACCGAATTTGATTaGGAGAGAGACAGATGGTTA +
Preference number: 5 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVDTEFD*ERDRWL
Trigger: TAACCATCTGTCTCTCTCCAAATCAAATTCGGTGTC...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTCCAGGGACACCGAATTaGATTTGGAGAGAGACAGAT +
Preference number: 5 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSPGTPN*IWRETD
Trigger: ATCTGTCTCTCTCCAAATCAAATTCGGTGTCCCTGG...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTACATGGGCAAATGCTCTaGCACCTCGATCATCATGTG +
Preference number: 5 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLHGQML*HLDHHV
Trigger: CACATGATGATCGAGGTGCAAGAGCATTTGCCCATG...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCTGAATGACTACATATaGCACTCAGTTGGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHLNDYI*HSVGCW
Trigger: CCAGCAACCAACTGAGTGCAATATGTAGTCATTCAG...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGAATCTTAGAACTTCTTaGCGAAGGAGTATACGGCAC +
Preference number: 5 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVNLRTS*RRSIRH
Trigger: GTGCCGTATACTCCTTCGCAAAGAAGTTCTAAGATT...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGAAGATACTCCTGTCTTaGCTGCCTAGTCAGTCGTAT +
Preference number: 5 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRKILLS*LPSQSY
Trigger: ATACGACTGACTAGGCAGCAAAGACAGGAGTATCTT...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGTTCAGTGCTTGGCTCTaGCATACAATGGTAACTGAA +
Preference number: 5 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVFSAWL*HTMVTE
Trigger: TTCAGTTACCATTGTATGCAAGAGCCAAGCACTGAA...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS CCA 90 bp CCTAGCTTTCTCATATTTGATACTCCCTGCAATCTGGCCACATTTTaGAGAATCTCTCTTAAGTTATCAGAAGGTTCTCGGGTCAGATCC +
Preference number: 5 (lower is better)
Translates to: PSFLIFDTPCNLATF*RISLKLSEGSRVRS
Trigger: GGATCTGACCCGAGAACCTTCTGATAACTTAAGAGAGATTCTCCAAAATGTGGCCAGATTGCAGGGAGTATCAAATATGAGAAAGCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
ENST00000513566.1
CDS CCA 90 bp CCTAGCTTTCTCATATTTGATACTCCCTGCAATCTGGCCACATTTTaGAGAATCTCTCTTAAGTTATCAGAAGGTTCTCGTACTCGGAGG +
Preference number: 5 (lower is better)
Translates to: PSFLIFDTPCNLATF*RISLKLSEGSRTRR
Trigger: CCTCCGAGTACGAGAACCTTCTGATAACTTAAGAGAGATTCTCCAAAATGTGGCCAGATTGCAGGGAGTATCAAATATGAGAAAGCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510711.5
ENST00000514735.1
CDS-3UTR CAA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGCGCAGTCTCTTTTCCTaGGGGATATCAAAGGATGCA +
Preference number: 5 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKRSLFS*GISKDA
Trigger: TGCATCCTTTGATATCCCCAAGGAAAAGAGACTGCG...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGGTGAGCTGTTTGGCCTaGGCAAAATCCAGATCCAGG +
Preference number: 5 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWVSCLA*AKSRSR
Trigger: CCTGGATCTGGATTTTGCCAAGGCCAAACAGCTCAC...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATACAACCGTGAGCTGTTaGGCCTTGGCAAAATCCAGA +
Preference number: 5 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHTTVSC*ALAKSR
Trigger: TCTGGATTTTGCCAAGGCCAAACAGCTCACGGTTGT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAAGGAGAAGCAAACCCTaGTCTCCAAGGTGGGATAAC +
Preference number: 5 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQRRSKP*SPRWDN
Trigger: GTTATCCCACCTTGGAGACAAGGGTTTGCTTCTCCT...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CAA 90 bp GCATCTACACCTACTGTCTCTCGTGAAGGACTTGAGCTCATTGAACTTATGCCATCAACATATTTGGAGTaGTATTCCCTGTGCCACTTT +
Preference number: 5 (lower is better)
Translates to: ASTPTVSREGLELIELMPSTYLE*YSLCHF
Trigger: AAAGTGGCACAGGGAATACAACTCCAAATATGTTGA...TGGCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGACAGTAGGTGTAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGTCTTCCTGTAGCAAATaGAGACCCCAATTTGATGAG +
Preference number: 5 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRSSCSK*RPQFDE
Trigger: CTCATCAAATTGGGGTCTCAATTTGCTACAGGAAGA...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACGTTCTGATTCGCCTGTaGCTTGTCTTACTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHVLIRL*LVLLSD
Trigger: ATCTGAAAGTAAGACAAGCAACAGGCGAATCAGAAC...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCATTTTCTCCAATGCTaGGTGTACTACCAGTGTCTT +
Preference number: 5 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHHFLQC*VYYQCL
Trigger: AAGACACTGGTAGTACACCAAGCATTGGAGAAAATG...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCTAACCTCTCTCGGCTaGTATTTTCTCTGTGATTCT +
Preference number: 5 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHLTSLG*YFLCDS
Trigger: AGAATCACAGAGAAAATACAAGCCGAGAGAGGTTAG...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGTTGTAGTGTCTGTATaGAAACTTTGGCTACGTATC +
Preference number: 5 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVVVVSV*KLWLRI
Trigger: GATACGTAGCCAAAGTTTCAATACAGACACTACAAC...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGAAGGACTTGAGCTCATaGAACTTATGCCACTTGTTG +
Preference number: 5 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRKDLSS*NLCHLL
Trigger: CAACAAGTGGCATAAGTTCAATGAGCTCAAGTCCTT...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGAACAATTCTGTGCTTTaGGTGCTGCTAGCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKNNSVL*VLLAEP
Trigger: AGGCTCAGCTAGCAGCACCAAAAGCACAGAATTGTT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAAATCTTAGAACTTCTTaGCGAAGGAGTATACGGCAC +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVINLRTS*RRSIRH
Trigger: GTGCCGTATACTCCTTCGCAAAGAAGTTCTAAGATT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGGAGAAGGAAGTTGTTTaGGTTAGGAAAGTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: SVQKILLSLLPSQSYFLREKEVV*VRKVSS
Trigger: ACTGCTGACTTTCCTAACCAAAACAACTTCCTTCTC...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATATTCAGTGCTTGGCTCTaGCATACAATGGTAACTGAA +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIFSAWL*HTMVTE
Trigger: TTCAGTTACCATTGTATGCAAGAGCCAAGCACTGAA...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAGAGAATACTGGAGTCTaGGATGAGATATCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQENTGV*DEISKR
Trigger: GCGCTTCGATATCTCATCCAAGACTCCAGTATTCTC...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CAA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGTACCTCGTTGCTCTGTaGTATGTCAATGCACCTAGC +
Preference number: 5 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMYLVAL*YVNAPS
Trigger: GCTAGGTGCATTGACATACAACAGAGCAACGAGGTA...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAATACCTCGTTGCTCTGTaGTATGTCAATGCACCTAGC +
Preference number: 5 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQYLVAL*YVNAPS
Trigger: GCTAGGTGCATTGACATACAACAGAGCAACGAGGTA...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CAA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAGTCCTCTCTACCTCGTaGCTCTGTTGTATGTCAATG +
Preference number: 5 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQVLSTS*LCCMSM
Trigger: CATTGACATACAACAGAGCAACGAGGTAGAGAGGAC...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAACTGCAATTAATGAGTaGGTCACAGAACTAGGAAAC +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVITAINE*VTELGN
Trigger: GTTTCCTAGTTCTGTGACCAACTCATTAATTGCAGT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGACTGCAATTAATGAGTaGGTCACAGAACTAGGAAAC +
Preference number: 5 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRTAINE*VTELGN
Trigger: GTTTCCTAGTTCTGTGACCAACTCATTAATTGCAGT...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAGCTTCTCTGTCTTCTTaGAGCTGTCCTTCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQASLSS*SCPSAV
Trigger: TACAGCTGAAGGACAGCTCAAAGAAGACAGAGAAGC...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CAA 90 bp AAGCCTTATTTCAGGATAGATGACCAAGGTGAGGGTACAGGGATAGTGATGGTGGCCTTATTTCCATATTaGGTATGCAAAGTACTCCTA +
Preference number: 5 (lower is better)
Translates to: KPYFRIDDQGEGTGIVMVALFPY*VCKVLL
Trigger: TAGGAGTACTTTGCATACCAAATATGGAAATAAGGC...CACCATCACTATCCCTGTACCCTCACCTTGGTCATCTATCCTGAAATAAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAGAGGAAGAATTGTGTTaGCCATATGTAAAAGCTCTC +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIEEELC*PYVKAL
Trigger: GAGAGCTTTTACATATGGCAAACACAATTCTTCCTC...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTGCTGCAGTTAAAATTTaGGAAAGGATGACTCTAGCC +
Preference number: 5 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSAAVKI*ERMTLA
Trigger: GGCTAGAGTCATCCTTTCCAAAATTTTAACTGCAGC...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGCATGAAGATTGGCCTTGTCTTCACATGCTTCATCGAGGATATCAAGAGCTTCGTGCCACTTTTCCAATaGTTTTGCTACATAACCTCT +
Preference number: 5 (lower is better)
Translates to: SMKIGLVFTCFIEDIKSFVPLFQ*FCYITS
Trigger: AGAGGTTATGTAGCAAAACAATTGGAAAAGTGGCAC...GAAGCTCTTGATATCCTCGATGAAGCATGTGAAGACAAGGCCAATCTTCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAATCAAGTCAACATATTaGGAGTTGTATTCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIIKSTY*ELYSLC
Trigger: GCACAGGGAATACAACTCCAAATATGTTGACTTGAT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGTGTACAGAAGATACTCCTGTCTTTGCTGCCTAGTCAGTCGTATTTTCTGAGGATCAAGTCAACATATTaGGAGTTGTATTCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: SVQKILLSLLPSQSYFLRIKSTY*ELYSLC
Trigger: GCACAGGGAATACAACTCCAAATATGTTGACTTGAT...CCTCAGAAAATACGACTGACTAGGCAGCAAAGACAGGAGTATCTTCTGTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGCATGAAGATTGGCCTTGTCTTCACATGCTTCATCGAGGATATCAAGAGCTTCATCAAGTCAACATATTaGGAGTTGTATTCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: SMKIGLVFTCFIEDIKSFIKSTY*ELYSLC
Trigger: GCACAGGGAATACAACTCCAAATATGTTGACTTGAT...GAAGCTCTTGATATCCTCGATGAAGCATGTGAAGACAAGGCCAATCTTCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAAAGTGCTTCATTGAGTaGTTCCTCAATCAAGTCAAC +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIKCFIE*FLNQVN
Trigger: GTTGACTTGATTGAGGAACAACTCAATGAAGCACTT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGCATGAAGATTGGCCTTGTCTTCACATGCTTCATCGAGGATATCAAGAGCTTCAAGTTCATTACAGAGTaGTTCCACATCATCTGGAAC +
Preference number: 5 (lower is better)
Translates to: SMKIGLVFTCFIEDIKSFKFITE*FHIIWN
Trigger: GTTCCAGATGATGTGGAACAACTCTGTAATGAACTT...GAAGCTCTTGATATCCTCGATGAAGCATGTGAAGACAAGGCCAATCTTCATGCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACATAATTTCCCTCCTTTaGGATCACTGCTACTACGAT +
Preference number: 5 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHIISLL*DHCYYD
Trigger: ATCGTAGTAGCAGTGATCCAAAAGGAGGGAAATTAT...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAATAATTTCCCTCCTTTaGGATCACTGCTACTACGAT +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIIISLL*DHCYYD
Trigger: ATCGTAGTAGCAGTGATCCAAAAGGAGGGAAATTAT...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTGTTCTGATTCGCCTGTaGCTTGTCTTACTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSVLIRL*LVLLSD
Trigger: ATCTGAAAGTAAGACAAGCAACAGGCGAATCAGAAC...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGCATGAAGATTGGCCTTGTCTTCACATGCTTCATCGAGGATATCAAGAGCTTCTCATATGTGAGCTCGTaGAACTTTCTACTACTAACC +
Preference number: 5 (lower is better)
Translates to: SMKIGLVFTCFIEDIKSFSYVSS*NFLLLT
Trigger: GGTTAGTAGTAGAAAGTTCAACGAGCTCACATATGA...GAAGCTCTTGATATCCTCGATGAAGCATGTGAAGACAAGGCCAATCTTCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGCCAGGGACACCGAATTaGATTTGGAGAGAGACAGAT +
Preference number: 5 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMPGTPN*IWRETD
Trigger: ATCTGTCTCTCTCCAAATCAAATTCGGTGTCCCTGG...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTACTGAATGACTACATATaGCACTCAGTTGGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLLNDYI*HSVGCW
Trigger: CCAGCAACCAACTGAGTGCAATATGTAGTCATTCAG...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATAACAATTCTGTGCTTTaGGTGCTGCTAGCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHNNSVL*VLLAEP
Trigger: AGGCTCAGCTAGCAGCACCAAAAGCACAGAATTGTT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGGGAGTATACGGCACATaGGTGTATCATCTGGAATTG +
Preference number: 5 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKGVYGT*VYHLEL
Trigger: CAATTCCAGATGATACACCAATGTGCCGTATACTCC...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CTCTTCAGATTCAAGAAGAAATTCTGTAAACTGGCAACCTACAACCGTGAGCTGAATCTTAGAACTTCTTaGCGAAGGAGTATACGGCAC +
Preference number: 5 (lower is better)
Translates to: LFRFKKKFCKLATYNRELNLRTS*RRSIRH
Trigger: GTGCCGTATACTCCTTCGCAAAGAAGTTCTAAGATT...CAGCTCACGGTTGTAGGTTGCCAGTTTACAGAATTTCTTCTTGAATCTGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTAAAGATACTCCTGTCTTaGCTGCCTAGTCAGTCGTAT +
Preference number: 5 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLKILLS*LPSQSY
Trigger: ATACGACTGACTAGGCAGCAAAGACAGGAGTATCTT...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp GCACTTCAAGTAGACCTCGCCTTATTTCCATATTTGGTATGCAAAGTACTCCTAGTAGGTATTCAGTGCTaGGCTCTTGCATACAATGGT +
Preference number: 5 (lower is better)
Translates to: ALQVDLALFPYLVCKVLLVGIQC*ALAYNG
Trigger: ACCATTGTATGCAAGAGCCAAGCACTGAATACCTAC...TAGGAGTACTTTGCATACCAAATATGGAAATAAGGCGAGGTCTACTTGAAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGCTTATAAGTCCCGGGTaGTTGAGGCTCTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWLISPG*LRLFFC
Trigger: GCAGAAGAAGAGCCTCAACAACCCGGGACTTATAAG...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTCTCTGCCCCAAGACTTaGCATTTTGTGCTAAATCAA +
Preference number: 5 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSLCPKT*HFVLNQ
Trigger: TTGATTTAGCACAAAATGCAAAGTCTTGGGGCAGAG...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGGAGAATACTGGAGTCTaGGATGAGATATCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWENTGV*DEISKR
Trigger: GCGCTTCGATATCTCATCCAAGACTCCAGTATTCTC...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAGCCTTATTTCCATATTaGGTATGCAAAGTACTCCTA +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIALFPY*VCKVLL
Trigger: TAGGAGTACTTTGCATACCAAATATGGAAATAAGGC...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTGAGGAAGAATTGTGTTaGCCATATGTAAAAGCTCTC +
Preference number: 5 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSEEELC*PYVKAL
Trigger: GAGAGCTTTTACATATGGCAAACACAATTCTTCCTC...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTCCATATTCATTAGGGTaGGCAAGCAGTGTAAATGAT +
Preference number: 5 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSPYSLG*ASSVND
Trigger: ATCATTTACACTGCTTGCCAACCCTAATGAATATGG...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CTCTTCAGATTCAAGAAGAAATTCTGTAAACTGGCAACCTACAACCGTGAGCTGATACCCTTAAATGTTTaGTTGCATAGAGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LFRFKKKFCKLATYNRELIPLNV*LHRVCR
Trigger: CCTGCAGACTCTATGCAACAAAACATTTAAGGGTAT...CAGCTCACGGTTGTAGGTTGCCAGTTTACAGAATTTCTTCTTGAATCTGAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGTCTTCCTGTAGCAAATaGAGACCCCAATTTGATGAG +
Preference number: 5 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKSSCSK*RPQFDE
Trigger: CTCATCAAATTGGGGTCTCAATTTGCTACAGGAAGA...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTAAGTTCATTACAGAGTaGTTCCACATCATCTGGAAC +
Preference number: 5 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSKFITE*FHIIWN
Trigger: GTTCCAGATGATGTGGAACAACTCTGTAATGAACTT...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTTCATATGTGAGCTCGTaGAACTTTCTACTACTAACC +
Preference number: 5 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSSYVSS*NFLLLT
Trigger: GGTTAGTAGTAGAAAGTTCAACGAGCTCACATATGA...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAAAACGTGAAAGGGCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACGTCTGTATTGAAACTTaGGCTACGTATCTTCATATG +
Preference number: 5 (lower is better)
Translates to: EKRERAKVPSLIPAVIAHVCIET*ATYLHM
Trigger: CATATGAAGATACGTAGCCAAAGTTTCAATACAGAC...GTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGCCCTTTCACGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GCCAAAGTTCCCTCTCTAATACCAGCAGTTATAGCACACCCCATTGTGGTAATAGTCTGTATTGAAACTTaGGCTACGTATCTTCATATG +
Preference number: 5 (lower is better)
Translates to: AKVPSLIPAVIAHPIVVIVCIET*ATYLHM
Trigger: CATATGAAGATACGTAGCCAAAGTTTCAATACAGAC...TATTACCACAATGGGGTGTGCTATAACTGCTGGTATTAGAGAGGGAACTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGTCTCTCGTGAAGGACTaGAGCTCATTGAACTTATGC +
Preference number: 5 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMSLVKD*SSLNLC
Trigger: GCATAAGTTCAATGAGCTCAAGTCCTTCACGAGAGA...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGCCAGGGACACCGAATTaGATTTGGAGAGAGACAGAT +
Preference number: 5 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWPGTPN*IWRETD
Trigger: ATCTGTCTCTCTCCAAATCAAATTCGGTGTCCCTGG...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAAAGATACTCCTGTCTTaGCTGCCTAGTCAGTCGTAT +
Preference number: 5 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQKILLS*LPSQSY
Trigger: ATACGACTGACTAGGCAGCAAAGACAGGAGTATCTT...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CAA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGGTAGGTATTCAGTGCTaGGCTCTTGCATACAATGGT +
Preference number: 5 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMVGIQC*ALAYNG
Trigger: ACCATTGTATGCAAGAGCCAAGCACTGAATACCTAC...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGATAAGTCCCGGGTTGTaGAGGCTCTTCTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWISPGL*RLFFCF
Trigger: AAAGCAGAAGAAGAGCCTCAACAACCCGGGACTTAT...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATCTAGCTTTCTCATATTaGATACTCCCTGCAATCTGG +
Preference number: 5 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHLAFSY*ILPAIW
Trigger: CCAGATTGCAGGGAGTATCAAATATGAGAAAGCTAG...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CAGTTTAGTTATCCAAGACCAAAGACCACGATGACAGGCAACGTTCTTAGAAGTCTGCTCGCACTTCTTTaGCTTCATTTAATAAAGCTA +
Preference number: 5 (lower is better)
Translates to: QFSYPRPKTTMTGNVLRSLLALL*LHLIKL
Trigger: TAGCTTTATTAAATGAAGCAAAAGAAGTGCGAGCAG...ACTTCTAAGAACGTTGCCTGTCATCGTGGTCTTTGGTCTTGGATAACTAAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAGTCCTCTCTACCTCGTaGCTCTGTTGTATGTCAATG +
Preference number: 5 (lower is better)
Translates to: KAINILINPPTTAFSLCKVLSTS*LCCMSM
Trigger: CATTGACATACAACAGAGCAACGAGGTAGAGAGGAC...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAGCTTCTCTGTCTTCTTaGAGCTGTCCTTCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: KAINILINPPTTAFSLCKASLSS*SCPSAV
Trigger: TACAGCTGAAGGACAGCTCAAAGAAGACAGAGAAGC...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGGCTGCAGTTAAAATTTaGGAAAGGATGACTCTAGCC +
Preference number: 5 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMAAVKI*ERMTLA
Trigger: GGCTAGAGTCATCCTTTCCAAAATTTTAACTGCAGC...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGAAGTGCTTCATTGAGTaGTTCCTCAATCAAGTCAAC +
Preference number: 5 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKKCFIE*FLNQVN
Trigger: GTTGACTTGATTGAGGAACAACTCAATGAAGCACTT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGAAGTTCATTACAGAGTaGTTCCACATCATCTGGAAC +
Preference number: 5 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKKFITE*FHIIWN
Trigger: GTTCCAGATGATGTGGAACAACTCTGTAATGAACTT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp CACAGTGCACATAAGAACAATTCACTGAAGTGCAGTCAAAGAGGTGTTATGAAGATAATTTCCCTCCTTTaGGATCACTGCTACTACGAT +
Preference number: 5 (lower is better)
Translates to: HSAHKNNSLKCSQRGVMKIISLL*DHCYYD
Trigger: ATCGTAGTAGCAGTGATCCAAAAGGAGGGAAATTAT...CTTCATAACACCTCTTTGACTGCACTTCAGTGAATTGTTCTTATGTGCACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAAGAGAAGGAAGTTGTTTaGGTTAGGAAAGTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQEKEVV*VRKVSS
Trigger: ACTGCTGACTTTCCTAACCAAAACAACTTCCTTCTC...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGGTAGGTATTCAGTGCTaGGCTCTTGCATACAATGGT +
Preference number: 5 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWVGIQC*ALAYNG
Trigger: ACCATTGTATGCAAGAGCCAAGCACTGAATACCTAC...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGACTGCAATTAATGAGTaGGTCACAGAACTAGGAAAC +
Preference number: 5 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMTAINE*VTELGN
Trigger: GTTTCCTAGTTCTGTGACCAACTCATTAATTGCAGT...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp GAAATTCATAGTTTACAACCAGCACAACTGCCCAGATTCCTCCCAATTATTCAACCATATTCATTAGGGTaGGCAAGCAGTGTAAATGAT +
Preference number: 5 (lower is better)
Translates to: EIHSLQPAQLPRFLPIIQPYSLG*ASSVND
Trigger: ATCATTTACACTGCTTGCCAACCCTAATGAATATGG...TTGAATAATTGGGAGGAATCTGGGCAGTTGTGCTGGTTGTAAACTATGAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CAA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATAAATCCAGATCCAGGTaGGCATATAATTTACTGCTG +
Preference number: 5 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHKSRSR*AYNLLL
Trigger: CAGCAGTAAATTATATGCCAACCTGGATCTGGATTT...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TATCCCTTTGATAAGATTATGCTTCAGGAGGCTTTTAATGCCCTTGACATAAACCCCTTAAATGTTTTGTaGCATAGAGTCTGCAGGCAT +
Preference number: 5 (lower is better)
Translates to: YPFDKIMLQEAFNALDINPLNVL*HRVCRH
Trigger: ATGCCTGCAGACTCTATGCAACAAAACATTTAAGGG...GTTTATGTCAAGGGCATTAAAAGCCTCCTGAAGCATAATCTTATCAAAGGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CAA 90 bp TATCCCTTTGATAAGATTATGCTTCAGGAGGCTTTTAATGCCCTTGACATAAACCATTTTCTCCAATGCTaGGTGTACTACCAGTGTCTT +
Preference number: 5 (lower is better)
Translates to: YPFDKIMLQEAFNALDINHFLQC*VYYQCL
Trigger: AAGACACTGGTAGTACACCAAGCATTGGAGAAAATG...GTTTATGTCAAGGGCATTAAAAGCCTCCTGAAGCATAATCTTATCAAAGGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357387.8
CDS-3UTR CAA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGGTTGTAGTGTCTGTATaGAAACTTTGGCTACGTATC +
Preference number: 5 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMVVVSV*KLWLRI
Trigger: GATACGTAGCCAAAGTTTCAATACAGACACTACAAC...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATGTTGTAGTGTCTGTATaGAAACTTTGGCTACGTATC +
Preference number: 5 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHVVVSV*KLWLRI
Trigger: GATACGTAGCCAAAGTTTCAATACAGACACTACAAC...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAGGAGTATACGGCACATaGGTGTATCATCTGGAATTG +
Preference number: 5 (lower is better)
Translates to: KAINILINPPTTAFSLCKGVYGT*VYHLEL
Trigger: CAATTCCAGATGATACACCAATGTGCCGTATACTCC...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGTGTATCAACTATAGGTaGCTTTGGTGGTGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWCINYR*LWWCCQ
Trigger: TTGGCAACACCACCAAAGCAACCTATAGTTGATACA...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS TCA 90 bp CTCTCTAATTCTACATCAGCTCGCACATACTGTCGAGTCTTTGGATaGTTAAGAAGGTGCAAAATTGTAGTAATTAGGGCCTCATTTATT +
Preference number: 5 (lower is better)
Translates to: LSNSTSARTYCRVFG*LRRCKIVVIRASFI
Trigger: AATAAATGAGGCCCTAATTACTACAATTTTGCACCTTCTTAATCATCCAAAGACTCGACAGTATGTGCGAGCTGATGTAGAATTAGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000510711.5
CDS TCA 90 bp ACCTCTAATTCTACATCAGCTCGCACATACTGTCGAGTCTTTGGATaGTTAAGAAGGTGCAAAATTGTAGTAATTAGGGCCTCATTTATT +
Preference number: 5 (lower is better)
Translates to: TSNSTSARTYCRVFG*LRRCKIVVIRASFI
Trigger: AATAAATGAGGCCCTAATTACTACAATTTTGCACCTTCTTAATCATCCAAAGACTCGACAGTATGTGCGAGCTGATGTAGAATTAGAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513566.1
CDS GCA 90 bp GTAAAGTTATTCAGATGGCCTAGCTTTCTCATATTTGATACTCCCTaGAATCTGGCCACATTTTGGAGAATCTCTCTTAAGTTATCAGAA +
Preference number: 5 (lower is better)
Translates to: VKLFRWPSFLIFDTP*NLATFWRISLKLSE
Trigger: TTCTGATAACTTAAGAGAGATTCTCCAAAATGTGGCCAGATTGCAGGGAGTATCAAATATGAGAAAGCTAGGCCATCTGAATAACTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000510711.5
ENST00000511516.5
ENST00000513566.1
ENST00000514735.1
CDS CCA 90 bp AGGTGCAAAATTGTAGTAATTAGGGCCTCATTTATTCGACTTAATTaGCAATCGATCACATTTTTCAAGATGGTGTTTAGTCCACCTCGA +
Preference number: 5 (lower is better)
Translates to: RCKIVVIRASFIRLN*QSITFFKMVFSPPR
Trigger: TCGAGGTGGACTAAACACCATCTTGAAAAATGTGATCGATTGCCAATTAAGTCGAATAAATGAGGCCCTAATTACTACAATTTTGCACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000510711.5
ENST00000511516.5
ENST00000513566.1
ENST00000514735.1
CDS-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGGAGGAAGAATTGTGTTaGCCATATGTAAAAGCTCTC +
Preference number: 5 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWEEELC*PYVKAL
Trigger: GAGAGCTTTTACATATGGCAAACACAATTCTTCCTC...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAGCTGCAGTTAAAATTTaGGAAAGGATGACTCTAGCC +
Preference number: 5 (lower is better)
Translates to: KAINILINPPTTAFSLCKAAVKI*ERMTLA
Trigger: GGCTAGAGTCATCCTTTCCAAAATTTTAACTGCAGC...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AGGGTTCTTTACAGAGATCTCAAAGAACAAGCCCATTACAAAAAGGATCTGCATTCAGAGGAAATCGTTTaGTTTTTATCATGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: RVLYRDLKEQAHYKKDLHSEEIV*FLSCSW
Trigger: CCAGCTACATGATAAAAACAAAACGATTTCCTCTGA...ATGCAGATCCTTTTTGTAATGGGCTTGTTCTTTGAGATCTCTGTAAAGAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGTCAACATATTTGGAGTaGTATTCCCTGTGCCACTTT +
Preference number: 5 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWSTYLE*YSLCHF
Trigger: AAAGTGGCACAGGGAATACAACTCCAAATATGTTGA...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGTCATATGTGAGCTCGTaGAACTTTCTACTACTAACC +
Preference number: 5 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWSYVSS*NFLLLT
Trigger: GGTTAGTAGTAGAAAGTTCAACGAGCTCACATATGA...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp ATAACTTGTGAAGGGTGCTTCTGCATATCCCATTATTGTTCCACTGTCATTATGGTCTGTATTGAAACTTaGGCTACGTATCTTCATATG +
Preference number: 5 (lower is better)
Translates to: ITCEGCFCISHYCSTVIMVCIET*ATYLHM
Trigger: CATATGAAGATACGTAGCCAAAGTTTCAATACAGAC...CATAATGACAGTGGAACAATAATGGGATATGCAGAAGCACCCTTCACAAGTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAATTCAGTGCTTGGCTCTaGCATACAATGGTAACTGAA +
Preference number: 5 (lower is better)
Translates to: KAINILINPPTTAFSLCKFSAWL*HTMVTE
Trigger: TTCAGTTACCATTGTATGCAAGAGCCAAGCACTGAA...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS TCA 90 bp TTCTCTAATTCTACATCAGCTCGCACATACTGTCGAGTCTTTGGATaGTTAAGAAGGTGCAAAATTGTAGTAATTAGGGCCTCATTTATT +
Preference number: 5 (lower is better)
Translates to: FSNSTSARTYCRVFG*LRRCKIVVIRASFI
Trigger: AATAAATGAGGCCCTAATTACTACAATTTTGCACCTTCTTAATCATCCAAAGACTCGACAGTATGTGCGAGCTGATGTAGAATTAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511516.5
CDS-3UTR CAA 90 bp TTACTTCCTTTGGAGGTTTTAACCACTATTTGGTCTAGTAACTCTGACATTTGGGCCTTATTTCCATATTaGGTATGCAAAGTACTCCTA +
Preference number: 5 (lower is better)
Translates to: LLPLEVLTTIWSSNSDIWALFPY*VCKVLL
Trigger: TAGGAGTACTTTGCATACCAAATATGGAAATAAGGC...CCAAATGTCAGAGTTACTAGACCAAATAGTGGTTAAAACCTCCAAAGGAAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS-3UTR CAA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAAAAATCCAGATCCAGGTaGGCATATAATTTACTGCTG +
Preference number: 5 (lower is better)
Translates to: KAINILINPPTTAFSLCKKSRSR*AYNLLL
Trigger: CAGCAGTAAATTATATGCCAACCTGGATCTGGATTT...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS GCA 90 bp AAGCTGACTCCAAATACTATATTCAAAGGACAACAATGCAATACATaGACACGAAGAAACTATAATACAGTGCATAATTCTGTTCCAACC +
Preference number: 5 (lower is better)
Translates to: KLTPNTIFKGQQCNT*TRRNYNTVHNSVPT
Trigger: GGTTGGAACAGAATTATGCACTGTATTATAGTTTCTTCGTGTGCATGTATTGCATTGTTGTCCTTTGAATATAGTATTTGGAGTCAGCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513566.1
CDS CCA 90 bp ACCCTTATTTCCATATTTGGTATGCAAAGTACTCCTATTAGAGACTaGATCCCAGAATTTCCAGGTTTACATAAATTAATAATACCTGCC +
Preference number: 5 (lower is better)
Translates to: TLISIFGMQSTPIRD*IPEFPGLHKLIIPA
Trigger: GGCAGGTATTATTAATTTATGTAAACCTGGAAATTCTGGGATCCAGTCTCTAATAGGAGTACTTTGCATACCAAATATGGAAATAAGGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510711.5
CDS-3UTR CAA 90 bp AAGGCAATTAATATACTCATAAACCCACCTACCACTGCATTTAGTTTGTGCAAATCAGAGGAAATCGTTTaGTTTTTATCATGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: KAINILINPPTTAFSLCKSEEIV*FLSCSW
Trigger: CCAGCTACATGATAAAAACAAAACGATTTCCTCTGA...TTTGCACAAACTAAATGCAGTGGTAGGTGGGTTTATGAGTATATTAATTGCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
CDS GCA 72 bp GAATGCAACGGCAAGATCTCAGCTCAGTATAACCTCTaGCTTCCGGGTTCAAGCAATTCTCGTGTGTCAGCC +
Preference number: 6 (lower is better)
Translates to: ECNGKISAQYNL*LPGSSNSRVSA
Trigger: GGCTGACACACGAGAATTGCTTGAACCCGGAAGGCAGAGGTTATACTGAGCTGAGATCTTGCCGTTGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515846.1
CDS TCA 72 bp ATTTTAGCACCTTCTGGAGAATACTGGAGTCTTGGATaGGATATCGAAGCGCTCGTAGCCCTGCTGCTCGCA +
Preference number: 6 (lower is better)
Translates to: ILAPSGEYWSLG*DIEALVALLLA
Trigger: TGCGAGCAGCAGGGCTACGAGCGCTTCGATATCTCATCCAAGACTCCAGTATTCTCCAGAAGGTGCTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000510711.5
ENST00000511516.5
ENST00000513566.1
ENST00000514735.1
CDS GCA 72 bp AGTTCCAGATGGAAGACCTCCTGCATCATGGGCAAATaGTCTTGCACCTCGATCATCATGTGGTGGTATGTT +
Preference number: 6 (lower is better)
Translates to: SSRWKTSCIMGK*SCTSIIMWWYV
Trigger: AACATACCACCACATGATGATCGAGGTGCAAGAGCATTTGCCCATGATGCAGGAGGTCTTCCATCTGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296782.9
ENST00000357387.8
CDS CCA 72 bp TTCAATTTTAGCACCTTCTGGAGAATACTGGAGTCTTaGATGAGATATCGAAGCGCTCGTAGCCCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: FNFSTFWRILES*MRYRSARSPAA
Trigger: AGCAGCAGGGCTACGAGCGCTTCGATATCTCATCCAAGACTCCAGTATTCTCCAGAAGGTGCTAAAATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000510711.5
ENST00000511516.5
ENST00000513566.1
ENST00000514735.1
CDS CAA 72 bp ATCGAAGCGCTCGTAGCCCTGCTGCTCGCACTTCTTTaGCTTCATTTAATAAAGCTAACCGCAAACAAATTA +
Preference number: 6 (lower is better)
Translates to: IEALVALLLALL*LHLIKLTANKL
Trigger: TAATTTGTTTGCGGTTAGCTTTATTAAATGAAGCAAAAGAAGTGCGAGCAGCAGGGCTACGAGCGCTTCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000510711.5
ENST00000511516.5
ENST00000513566.1
ENST00000514735.1
CDS CAA 72 bp CTGACTAATCGAAGTGCTTGTGTCCTCTCTACCTCGTaGCTCTGTTGTATGTCAATGCACCTAGCTATTAAA +
Preference number: 6 (lower is better)
Translates to: LTNRSACVLSTS*LCCMSMHLAIK
Trigger: TTTAATAGCTAGGTGCATTGACATACAACAGAGCAACGAGGTAGAGAGGACACAAGCACTTCGATTAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000510711.5
ENST00000511516.5
ENST00000513566.1
ENST00000514735.1
CDS CCA 72 bp CTCATATTTGATACTCCCTGCAATCTGGCCACATTTTaGAGAATCTCTCTTAAGTTATCAGAAGGTTCTCGG +
Preference number: 6 (lower is better)
Translates to: LIFDTPCNLATF*RISLKLSEGSR
Trigger: CCGAGAACCTTCTGATAACTTAAGAGAGATTCTCCAAAATGTGGCCAGATTGCAGGGAGTATCAAATATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296782.9
ENST00000357387.8
ENST00000511516.5
ENST00000513566.1
CDS CCA 72 bp CTCATATTTGATACTCCCTGCAATCTGGCCACATTTTaGAGAATCTCTCTTAAGTTATCAGAAGGTTCTCGT +
Preference number: 6 (lower is better)
Translates to: LIFDTPCNLATF*RISLKLSEGSR
Trigger: ACGAGAACCTTCTGATAACTTAAGAGAGATTCTCCAAAATGTGGCCAGATTGCAGGGAGTATCAAATATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510711.5
ENST00000514735.1
CDS GCA 72 bp AATGCAATACATGCACACGAAGAAACTATAATACAGTaGATAATTCTGTTCCAACCTCCACGACATACTTTC +
Preference number: 6 (lower is better)
Translates to: NAIHAHEETIIQ*IILFQPPRHTF
Trigger: GAAAGTATGTCGTGGAGGTTGGAACAGAATTATGCACTGTATTATAGTTTCTTCGTGTGCATGTATTGCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513566.1
CDS GCA 72 bp AAGCTGACTCCAAATACTATATTCAAAGGACAACAATaGAATACATGCACACGAAGAAACTATAATACAGTG +
Preference number: 6 (lower is better)
Translates to: KLTPNTIFKGQQ*NTCTRRNYNTV
Trigger: CACTGTATTATAGTTTCTTCGTGTGCATGTATTGCATTGTTGTCCTTTGAATATAGTATTTGGAGTCAGCTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513566.1