RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIC8A (Homo sapiens)

Ensembl gene IDs: ENSG00000177963

Ensembl transcript IDs: ENST00000325207.9, ENST00000524854.5, ENST00000526104.5, ENST00000526104.6, ENST00000526557.1, ENST00000526982.1, ENST00000527039.1, ENST00000527468.1, ENST00000527696.5, ENST00000527728.1, ENST00000528357.5, ENST00000529275.1, ENST00000530149.1, ENST00000530889.1, ENST00000531541.1, ENST00000532241.1, ENST00000532373.1, ENST00000626818.1

Found 517 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGTCCCGGGACAGGATTCGGACACTCTGCAGCCAGATGACACGGTaGGAGGGTGGCAAGCCCTGTTCCAGGACGGAGACCAGCAGCTCC +
Preference number: 1 (lower is better)
Translates to: RSRDRIRTLCSQMTR*EGGKPCSRTETSSS
Trigger: GGAGCTGCTGGTCTCCGTCCTGGAACAGGGCTTGCCACCCTCCCACCGTGTCATCTGGCTGCAGAGTGTCCGAATCCTGTCCCGGGACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR TCA 90 bp GGCAGTTGCGGTCCCGGGACAGGATTCGGACACTCTGCAGCCAGATaGCACGGTGGGAGGGTGGCAAGCCCTGTTCCAGGACGGAGACCA +
Preference number: 1 (lower is better)
Translates to: GSCGPGTGFGHSAAR*HGGRVASPVPGRRP
Trigger: TGGTCTCCGTCCTGGAACAGGGCTTGCCACCCTCCCACCGTGTCATCTGGCTGCAGAGTGTCCGAATCCTGTCCCGGGACCGCAACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR GCA 90 bp AACGGGTCCAGGCAGTTGCGGTCCCGGGACAGGATTCGGACACTCTaGAGCCAGATGACACGGTGGGAGGGTGGCAAGCCCTGTTCCAGG +
Preference number: 1 (lower is better)
Translates to: NGSRQLRSRDRIRTL*SQMTRWEGGKPCSR
Trigger: CCTGGAACAGGGCTTGCCACCCTCCCACCGTGTCATCTGGCTGCAGAGTGTCCGAATCCTGTCCCGGGACCGCAACTGCCTGGACCCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR TCA 90 bp CATCGTGGGGGAAGCTCCTCTCACGGTACAGCCCCACACGCTCTGTaGGCTTCACCACTAGGCGGGCCTCTGCTGCCAGCATCTGTGCCA +
Preference number: 1 (lower is better)
Translates to: HRGGSSSHGTAPHAL*ASPLGGPLLPASVP
Trigger: TGGCACAGATGCTGGCAGCAGAGGCCCGCCTAGTGGTGAAGCTCACAGAGCGTGTGGGGCTGTACCGTGAGAGGAGCTTCCCCCACGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR CCA 90 bp GGACAGGATTCGGACACTCTGCAGCCAGATGACACGGTGGGAGGGTaGCAAGCCCTGTTCCAGGACGGAGACCAGCAGCTCCGCCAGTCT +
Preference number: 1 (lower is better)
Translates to: GQDSDTLQPDDTVGG*QALFQDGDQQLRQS
Trigger: AGACTGGCGGAGCTGCTGGTCTCCGTCCTGGAACAGGGCTTGCCACCCTCCCACCGTGTCATCTGGCTGCAGAGTGTCCGAATCCTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR CCA 90 bp GTGCGGAGTGCCGTTAGCAGGAAGAGGAGCCGCAAGTCAAAGAACTaGACATCGTGGGGGAAGCTCCTCTCACGGTACAGCCCCACACGC +
Preference number: 1 (lower is better)
Translates to: VRSAVSRKRSRKSKN*TSWGKLLSRYSPTR
Trigger: GCGTGTGGGGCTGTACCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGCGGCTCCTCTTCCTGCTAACGGCACTCCGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR TCA 90 bp GTCAGCTCCAGTGTGTCAGTTAGCAGGCGCACTCCTTTCAGCTCCTaGAACAGCTGCTGGCGCACATCGGTGCGGAGTGCCGTTAGCAGG +
Preference number: 1 (lower is better)
Translates to: VSSSVSVSRRTPFSS*NSCWRTSVRSAVSR
Trigger: CCTGCTAACGGCACTCCGCACCGATGTGCGCCAGCAGCTGTTTCAGGAGCTGAAAGGAGTGCGCCTGCTAACTGACACACTGGAGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR CCA 90 bp GCACATACCCCAACACACTGGCTCTGCCAGTGTGCCAATCCCAGATaGTGCTTGCTTTGTGTGCACCCACACCCAAACCCCTGCCCTCCC +
Preference number: 1 (lower is better)
Translates to: AHTPTHWLCQCANPR*CLLCVHPHPNPCPP
Trigger: GGGAGGGCAGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR CCA 90 bp GCCGTTAGCAGGAAGAGGAGCCGCAAGTCAAAGAACTGGACATCGTaGGGGAAGCTCCTCTCACGGTACAGCCCCACACGCTCTGTGAGC +
Preference number: 1 (lower is better)
Translates to: AVSRKRSRKSKNWTS*GKLLSRYSPTRSVS
Trigger: GCTCACAGAGCGTGTGGGGCTGTACCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGCGGCTCCTCTTCCTGCTAACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR GCA 90 bp CCCCAACACACTGGCTCTGCCAGTGTGCCAATCCCAGATGGTGCTTaGTTTGTGTGCACCCACACCCAAACCCCTGCCCTCCCATATGCT +
Preference number: 1 (lower is better)
Translates to: PQHTGSASVPIPDGA*FVCTHTQTPALPYA
Trigger: AGCATATGGGAGGGCAGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR GCA 90 bp GGCGCACTCCTTTCAGCTCCTGAAACAGCTGCTGGCGCACATCGGTaGGGAGTGCCGTTAGCAGGAAGAGGAGCCGCAAGTCAAAGAACT +
Preference number: 1 (lower is better)
Translates to: GALLSAPETAAGAHR*GVPLAGRGAASQRT
Trigger: AGTTCTTTGACTTGCGGCTCCTCTTCCTGCTAACGGCACTCCGCACCGATGTGCGCCAGCAGCTGTTTCAGGAGCTGAAAGGAGTGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR GCA 90 bp CATACCCCAACACACTGGCTCTGCCAGTGTGCCAATCCCAGATGGTaGTTGCTTTGTGTGCACCCACACCCAAACCCCTGCCCTCCCATA +
Preference number: 1 (lower is better)
Translates to: HTPTHWLCQCANPRW*LLCVHPHPNPCPPI
Trigger: TATGGGAGGGCAGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR GCA 90 bp ACTGGCTCTGCCAGTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTaGACCCACACCCAAACCCCTGCCCTCCCATATGCTCTTCTGTGT +
Preference number: 1 (lower is better)
Translates to: TGSASVPIPDGACFV*THTQTPALPYALLC
Trigger: ACACAGAAGAGCATATGGGAGGGCAGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR GCA 90 bp CCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTaGCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAA +
Preference number: 1 (lower is better)
Translates to: PGKCSTYPNTLALPV*QSQMVLALCAPTPK
Trigger: TTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR GCA 90 bp GTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTaGCAGTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCA +
Preference number: 1 (lower is better)
Translates to: VFSLGSAAHTPTHWL*QCANPRWCLLCVHP
Trigger: TGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR GCA 90 bp GAGGTTGCACAGGCACTTGAGGGACTCCAGTACAACATCCATGTCTaGGGACTCTGGGACGGACCCCTCAGAGACAGAGATGTCAGCATA +
Preference number: 1 (lower is better)
Translates to: EVAQALEGLQYNIHV*GLWDGPLRDRDVSI
Trigger: TATGCTGACATCTCTGTCTCTGAGGGGTCCGTCCCAGAGTCCGCAGACATGGATGTTGTACTGGAGTCCCTCAAGTGCCTGTGCAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR CCA 90 bp GCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATaGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCC +
Preference number: 1 (lower is better)
Translates to: ANHEQNGSQEKGFLR*RSGGGCGSSGMWLP
Trigger: GGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.5
ENST00000527696.5
3UTR TCA 90 bp GAGGACCAAGGAGAATGTCTAAGAGGCCTCCAGCCCTGCGCTCAGTaGAGACAGGACAGGAACAACAGAGCATACATACCTTGGAAGGGT +
Preference number: 1 (lower is better)
Translates to: EDQGECLRGLQPCAQ*RQDRNNRAYIPWKG
Trigger: ACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGCAGGGCTGGAGGCCTCTTAGACATTCTCCTTGGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR GCA 90 bp GATATACTCGTATGGAAAGTTCTGACAGGTTTTCTCCCTGGGAAGTaGAGCACATACCCCAACACACTGGCTCTGCCAGTGTGCCAATCC +
Preference number: 1 (lower is better)
Translates to: DILVWKVLTGFLPGK*STYPNTLALPVCQS
Trigger: GGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR TCA 90 bp GACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATaGACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGAAG +
Preference number: 1 (lower is better)
Translates to: DRCSPEMRNWTRGKS*TERESREGVSKMEK
Trigger: CTTCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.5
ENST00000527696.5
3UTR TCA 90 bp CATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGAAAGTTCTaGCAGGTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACAC +
Preference number: 1 (lower is better)
Translates to: HTLEGCVLIYSYGKF*QVFSLGSAAHTPTH
Trigger: GTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATATCAGAACACACCCTTCCAAGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR TCA 90 bp CAGGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTaGTATACTCGTATGGAAAGTTCTGACAGGTTTTCTCCCTGGGAA +
Preference number: 1 (lower is better)
Translates to: QDRNNRAYIPWKGVF*YTRMESSDRFSPWE
Trigger: TTCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR CCA 90 bp ACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATaGAAAGTTCTGACAGGTTTTCTCCCTGGGAAGTGCAGCACATAC +
Preference number: 1 (lower is better)
Translates to: TEHTYLGRVCSDILV*KVLTGFLPGKCSTY
Trigger: GTATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR CAA 90 bp GCTAGTGCCTGCAGGCTCTGGCGGCTGGTGAACGGGTCCAGGCAGTaGCGGTCCCGGGACAGGATTCGGACACTCTGCAGCCAGATGACA +
Preference number: 2 (lower is better)
Translates to: ASACRLWRLVNGSRQ*RSRDRIRTLCSQMT
Trigger: TGTCATCTGGCTGCAGAGTGTCCGAATCCTGTCCCGGGACCGCAACTGCCTGGACCCGTTCACCAGCCGCCAGAGCCTGCAGGCACTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR TCA 90 bp AAAGAACTGGACATCGTGGGGGAAGCTCCTCTCACGGTACAGCCCCACACGCTCGGCTCTGGCGGCTGGTaGACGGGTCCAGGCAGTTGC +
Preference number: 2 (lower is better)
Translates to: KELDIVGEAPLTVQPHTLGSGGW*TGPGSC
Trigger: GCAACTGCCTGGACCCGTTCACCAGCCGCCAGAGCC...GAGCGTGTGGGGCTGTACCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR GCA 90 bp CTCTGTGCGGTCTCCAGCAGTAGCGATCATCACACAGTGCCGGAGAAGGGTCCCACGGGTCCAGGCAGTTaGGGTCCCGGGACAGGATTC +
Preference number: 2 (lower is better)
Translates to: LCAVSSSSDHHTVPEKGPTGPGS*GPGTGF
Trigger: GAATCCTGTCCCGGGACCGCAACTGCCTGGACCCGT...GGGACCCTTCTCCGGCACTGTGTGATGATCGCTACTGCTGGAGACCGCACAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR TCA 90 bp AAGAGGAGCCGCAAGTCAAAGAACTGGACATCGTGGGGGAAGCTCCTCTCACGGGTGCCACAGGGCTGCTaGGCACGAGGTTGCACAGGC +
Preference number: 2 (lower is better)
Translates to: KRSRKSKNWTSWGKLLSRVPQGC*ARGCTG
Trigger: GCCTGTGCAACCTCGTGCTCAGCAGCCCTGTGGCAC...CCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGCGGCTCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR TCA 90 bp AAGAGGAGCCGCAAGTCAAAGAACTGGACATCGTGGGGGAAGCTCCTCTCACGGGCCCCACACGCTCTGTaGGCTTCACCACTAGGCGGG +
Preference number: 2 (lower is better)
Translates to: KRSRKSKNWTSWGKLLSRAPHAL*ASPLGG
Trigger: CCCGCCTAGTGGTGAAGCTCACAGAGCGTGTGGGGC...CCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGCGGCTCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR CCA 90 bp AGGGCTGCTGAGCACGAGGTTGCACAGGCACTTGAGGGACTCCAGTACAACATCAGTGCCTGCAGGCTCTaGCGGCTGGTGAACGGGTCC +
Preference number: 2 (lower is better)
Translates to: RAAEHEVAQALEGLQYNISACRL*RLVNGS
Trigger: GGACCCGTTCACCAGCCGCCAGAGCCTGCAGGCACT...GATGTTGTACTGGAGTCCCTCAAGTGCCTGTGCAACCTCGTGCTCAGCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR CAA 90 bp GCCTCTGCTGCCAGCATCTGTGCCACAGGGCTGCTGAGCACGAGGTaGCACAGGCACTTGAGGGACTCCAGTACAACATCCATGTCTGCG +
Preference number: 2 (lower is better)
Translates to: ASAASICATGLLSTR*HRHLRDSSTTSMSA
Trigger: CGCAGACATGGATGTTGTACTGGAGTCCCTCAAGTGCCTGTGCAACCTCGTGCTCAGCAGCCCTGTGGCACAGATGCTGGCAGCAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR TCA 90 bp AAGAGGAGCCGCAAGTCAAAGAACTGGACATCGTGGGGGAAGCTCCTCTCACGGCACTCTGCAGCCAGATaGCACGGTGGGAGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: KRSRKSKNWTSWGKLLSRHSAAR*HGGRVA
Trigger: TGCCACCCTCCCACCGTGTCATCTGGCTGCAGAGTG...CCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGCGGCTCCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR CCA 90 bp CCAGCGTCAGCTCCAGTGTGTCAGTTAGCAGGCGCACTCCTTTCAGCTCCTGAAGACACGGTGGGAGGGTaGCAAGCCCTGTTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: PASAPVCQLAGALLSAPEDTVGG*QALFQD
Trigger: GTCCTGGAACAGGGCTTGCCACCCTCCCACCGTGTC...TTCAGGAGCTGAAAGGAGTGCGCCTGCTAACTGACACACTGGAGCTGACGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR CAA 90 bp ACCCCAACACACTGGCTCTGCCAGTGTGCCAATCCCAGATGGTGCTaGCTTTGTGTGCACCCACACCCAAACCCCTGCCCTCCCATATGC +
Preference number: 2 (lower is better)
Translates to: TPTHWLCQCANPRWC*LCVHPHPNPCPPIC
Trigger: GCATATGGGAGGGCAGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR CAA 90 bp AGCATCTGTGCCACAGGGCTGCTGAGCACGAGGTTGCACAGGCACTaGAGGGACTCCAGTACAACATCCATGTCTGCGGACTCTGGGACG +
Preference number: 2 (lower is better)
Translates to: SICATGLLSTRLHRH*RDSSTTSMSADSGT
Trigger: CGTCCCAGAGTCCGCAGACATGGATGTTGTACTGGAGTCCCTCAAGTGCCTGTGCAACCTCGTGCTCAGCAGCCCTGTGGCACAGATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR TCA 90 bp CCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTGCCAATCCAAGCAGCACCAGTCCTaGTGGGGGAGCAGAAGAGCT +
Preference number: 2 (lower is better)
Translates to: PGKCSTYPNTLALPVCQSKQHQS*WGSRRA
Trigger: AGCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTT...GGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR GCA 90 bp CCAAAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGATGCCCAGGTAGGCCCTaGCCTCAGGCAGCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: PKPARTRALWILQWAAERCPGRP*PQAAAS
Trigger: AGAAGCTGCTGCCTGAGGGCAGGGCCTACCTGGGCA...TCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp GCACATACCCCAACACACTGGCTCTGCCAGTGTGCCAATCCCAGATGGTGCTTGCGGGTGTGGATCCAGTaGGATGTGGCTTCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: AHTPTHWLCQCANPRWCLRVWIQ*DVASPG
Trigger: ACCTGGGGAAGCCACATCCCACTGGATCCACACCCG...CAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp CTCTGCCAGTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAAGTGGGGGCGGGTGTaGATCCAGTGGGATGTGGCT +
Preference number: 2 (lower is better)
Translates to: LCQCANPRWCLLCVHPHPKWGRV*IQWDVA
Trigger: AGCCACATCCCACTGGATCCACACCCGCCCCCACTT...TGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp GCCGTTAGCAGGAAGAGGAGCCGCAAGTCAAAGAACTGGACATCGTGGGGGAAGCATGTCTGCGGACTCTaGGACGGACCCCTCAGAGAC +
Preference number: 2 (lower is better)
Translates to: AVSRKRSRKSKNWTSWGKHVCGL*DGPLRD
Trigger: GTCTCTGAGGGGTCCGTCCCAGAGTCCGCAGACATG...CTTCCCCCACGATGTCCAGTTCTTTGACTTGCGGCTCCTCTTCCTGCTAACGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR TCA 90 bp GGGTTTCTAAGATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTAAGCAGCACCAGTCCTaGTGGGGGAGCAGAAGAGCT +
Preference number: 2 (lower is better)
Translates to: GFLRWRSGGGCGSSGMWLKQHQS*WGSRRA
Trigger: AGCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTT...AAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCATCTTAGAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR GCA 90 bp GCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGACCAAGGCCAACACACTGGCTCTaGCAGTGTGCCAATCCCAGA +
Preference number: 2 (lower is better)
Translates to: ARTRALWILQWAAERGPRPTHWL*QCANPR
Trigger: TCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGG...CCTTGGTCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR GCA 90 bp CACAGGGCTGCTGAGCACGAGGTTGCACAGGCACTTGAGGGACTCCAGTACAACAGGATTCGGACACTCTaGAGCCAGATGACACGGTGG +
Preference number: 2 (lower is better)
Translates to: HRAAEHEVAQALEGLQYNRIRTL*SQMTRW
Trigger: CCACCGTGTCATCTGGCTGCAGAGTGTCCGAATCCT...GTTGTACTGGAGTCCCTCAAGTGCCTGTGCAACCTCGTGCTCAGCAGCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR GCA 90 bp AAAGAACTGGACATCGTGGGGGAAGCTCCTCTCACGGTACAGCCCCACACGCTCTACAACATCCATGTCTaGGGACTCTGGGACGGACCC +
Preference number: 2 (lower is better)
Translates to: KELDIVGEAPLTVQPHTLYNIHV*GLWDGP
Trigger: GGGTCCGTCCCAGAGTCCGCAGACATGGATGTTGTA...GAGCGTGTGGGGCTGTACCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR CAA 90 bp TCCACCTCCCCCTTGATGGAGTCCAGGGTGATGTTGAAGAGCACTTaGAGGATCTCCATGGCCCGCTCAGTCTCTTGGGAAGGAAGGAGC +
Preference number: 2 (lower is better)
Translates to: STSPLMESRVMLKST*RISMARSVSWEGRS
Trigger: GCTCCTTCCTTCCCAAGAGACTGAGCGGGCCATGGAGATCCTCAAAGTGCTCTTCAACATCACCCTGGACTCCATCAAGGGGGAGGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR TCA 90 bp GCACATACCCCAACACACTGGCTCTGCCAGTGTGCCAATCCCAGATGGTGCTTGTCAGGCAGCAGCTTCTaGACACATTCCTCTTGGCGC +
Preference number: 2 (lower is better)
Translates to: AHTPTHWLCQCANPRWCLSGSSF*THSSWR
Trigger: GCGCCAAGAGGAATGTGTTCAGAAGCTGCTGCCTGA...CAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR TCA 90 bp TCGGTGCGGAGTGCCGTTAGCAGGAAGAGGAGCCGCAAGTCAAAGAACTGGACAGGGCATCATCAAACGTaGAGCTCTGGGAGTGCTGCA +
Preference number: 2 (lower is better)
Translates to: SVRSAVSRKRSRKSKNWTGHHQT*SSGSAA
Trigger: TGCAGCACTCCCAGAGCTTCACGTTTGATGATGCCC...TGTCCAGTTCTTTGACTTGCGGCTCCTCTTCCTGCTAACGGCACTCCGCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR GCA 90 bp GGACCAAGGAGAATGTCTAAGAGGCCTCCAGCCCTGCGCTCAGTGAAGACAGGACTGGCTCTGCCAGTGTaGCAATCCCAGATGGTGCTT +
Preference number: 2 (lower is better)
Translates to: GPRRMSKRPPALRSVKTGLALPV*QSQMVL
Trigger: AAGCACCATCTGGGATTGGCACACTGGCAGAGCCAG...TCCTGTCTTCACTGAGCGCAGGGCTGGAGGCCTCTTAGACATTCTCCTTGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR TCA 90 bp CGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCACAAGAAGACCGTTGCAGAAGCAGCACCAGTCCTaGTGGGGGAGCAGAAGAGCT +
Preference number: 2 (lower is better)
Translates to: RLWNSRLSLSSSTRRPLQKQHQS*WGSRRA
Trigger: AGCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTT...CTGCAACGGTCTTCTTGTGCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR GCA 90 bp AGGTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGGTGCTTGCTTTGTGTaGACCCACACCCAAACCCCT +
Preference number: 2 (lower is better)
Translates to: RFSPWEVQHIPQHTGSASGACFV*THTQTP
Trigger: AGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACC...ACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR GCA 90 bp GGACCAAGGAGAATGTCTAAGAGGCCTCCAGCCCTGCGCTCAGTGAAGACAGGAATCCCAGATGGTGCTTaGTTTGTGTGCACCCACACC +
Preference number: 2 (lower is better)
Translates to: GPRRMSKRPPALRSVKTGIPDGA*FVCTHT
Trigger: GGTGTGGGTGCACACAAAGCAAGCACCATCTGGGAT...TCCTGTCTTCACTGAGCGCAGGGCTGGAGGCCTCTTAGACATTCTCCTTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp AAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGATCTAAGATGGAGAAGTaGGGGCGGGTGTGGATCCAG +
Preference number: 2 (lower is better)
Translates to: KPARTRALWILQWAAERGSKMEK*GRVWIQ
Trigger: CTGGATCCACACCCGCCCCCACTTCTCCATCTTAGA...TCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp AACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGACGACAGGTTTTCTCCCTaGGAAGTGCAGCACATACCC +
Preference number: 2 (lower is better)
Translates to: NQRELGHCGYYSGQLNEDDRFSP*EVQHIP
Trigger: GGGTATGTGCTGCACTTCCCAGGGAGAAAACCTGTC...GTCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR TCA 90 bp GCTCCAGTGTGTCAGTTAGCAGGCGCACTCCTTTCAGCTCCTGAAACAGCTGCTGGTTGCACAGGCACTTaGGGGACTCCAGTACAACAT +
Preference number: 2 (lower is better)
Translates to: APVCQLAGALLSAPETAAGCTGT*GTPVQH
Trigger: ATGTTGTACTGGAGTCCCTCAAGTGCCTGTGCAACC...AGCAGCTGTTTCAGGAGCTGAAAGGAGTGCGCCTGCTAACTGACACACTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR CCA 90 bp AAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGAGACAGGTTTTCTCCCTaGGAAGTGCAGCACATACCC +
Preference number: 2 (lower is better)
Translates to: KPARTRALWILQWAAERGDRFSP*EVQHIP
Trigger: GGGTATGTGCTGCACTTCCCAGGGAGAAAACCTGTC...TCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp AGCACTTTGAGGATCTCCATGGCCCGCTCAGTCTCTTGGGAAGGAAGGAGCGTGTTCCGGTCCTCCTGTTaGGCATCATCAAACGTGAAG +
Preference number: 2 (lower is better)
Translates to: STLRISMARSVSWEGRSVFRSSC*ASSNVK
Trigger: CTTCACGTTTGATGATGCCCAACAGGAGGACCGGAA...CACGCTCCTTCCTTCCCAAGAGACTGAGCGGGCCATGGAGATCCTCAAAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR TCA 90 bp GGACCAAGGAGAATGTCTAAGAGGCCTCCAGCCCTGCGCTCAGTGAAGACAGGAACCAGAGGCAAATCATaGACAGAACGGGAGTCAAGA +
Preference number: 2 (lower is better)
Translates to: GPRRMSKRPPALRSVKTGTRGKS*TERESR
Trigger: TCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGT...TCCTGTCTTCACTGAGCGCAGGGCTGGAGGCCTCTTAGACATTCTCCTTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp AAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCCGGGTGTGGATCCAGTaGGATGTGGCTTCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: KLDQRQIMNRTGVKRRGFRVWIQ*DVASPG
Trigger: ACCTGGGGAAGCCACATCCCACTGGATCCACACCCG...GAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp AACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGACAAAGTACTTCGTCTGTaGAATTCGAGGCTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: NQRELGHCGYYSGQLNEDKVLRL*NSRLSL
Trigger: CAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTT...GTCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp GCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGAAGGGGTTTCTAAGATaGAGAAGTGGGGGCGGGTGT +
Preference number: 2 (lower is better)
Translates to: ALSEDRTGTTEHTYLGRVKGFLR*RSGGGC
Trigger: ACACCCGCCCCCACTTCTCCATCTTAGAAACCCCTT...CACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp GCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGCATACCCCAACACACTaGCTCTGCCAGTGTGCCAAT +
Preference number: 2 (lower is better)
Translates to: ALSEDRTGTTEHTYLGRVHTPTH*LCQCAN
Trigger: ATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATG...CACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp GGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGAAGTGGGGGCGGGTGTaGATCCAGTGGGATGTGGCT +
Preference number: 2 (lower is better)
Translates to: GTTEHTYLGRVCSDILVWKWGRV*IQWDVA
Trigger: AGCCACATCCCACTGGATCCACACCCGCCCCCACTT...CCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR CAA 90 bp CTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCACAAGAAGACCGTaGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAAC +
Preference number: 2 (lower is better)
Translates to: LWNSRLSLSSSTRRP*QSRDEKLDQRQIMN
Trigger: GTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAGAACTCAGGCTCAGCCTCGAATTCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR TCA 90 bp GCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGACCAGAGGCAAATCATaGACAGAACGGGAGTCAAGA +
Preference number: 2 (lower is better)
Translates to: ALSEDRTGTTEHTYLGRVTRGKS*TERESR
Trigger: TCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGT...CACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR GCA 90 bp GGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGCCCTGCCCTCCCATATaGTCTTCTGTGTGCCCAGGT +
Preference number: 2 (lower is better)
Translates to: GTTEHTYLGRVCSDILVWPCPPI*SSVCPG
Trigger: ACCTGGGCACACAGAAGAGCATATGGGAGGGCAGGG...CCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR GCA 90 bp CGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGTTTTCTCCCTGGGAAGTaGAGCACATACCCCAACACA +
Preference number: 2 (lower is better)
Translates to: RSVKTGQEQQSIHTLEGCFLPGK*STYPNT
Trigger: TGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAA...ACACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp TGTGTGGTATGTGGTATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTCGGGTGTGGATCCAGTaGGATGTGGCTTCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: CVVCGINLNLWSHEGHFPRVWIQ*DVASPG
Trigger: ACCTGGGGAAGCCACATCCCACTGGATCCACACCCG...AGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTATACCACATACCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp AGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGATCTAAGATGGAGAAGTaGGGGCGGGTGTGGATCCAG +
Preference number: 2 (lower is better)
Translates to: RDEKLDQRQIMNRTGVKRSKMEK*GRVWIQ
Trigger: CTGGATCCACACCCGCCCCCACTTCTCCATCTTAGA...TCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR TCA 90 bp TGTGTGGTATGTGGTATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTCAGCCCTGCGCTCAGTaGAGACAGGACAGGAACAAC +
Preference number: 2 (lower is better)
Translates to: CVVCGINLNLWSHEGHFPQPCAQ*RQDRNN
Trigger: GTTGTTCCTGTCCTGTCTTCACTGAGCGCAGGGCTG...AGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTATACCACATACCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR GCA 90 bp TGTGTGGTATGTGGTATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTGGTGCTTGCTTTGTGTaGACCCACACCCAAACCCCT +
Preference number: 2 (lower is better)
Translates to: CVVCGINLNLWSHEGHFPGACFV*THTQTP
Trigger: AGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACC...AGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTATACCACATACCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR GCA 90 bp GGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGGCACAAGAAGACCGTTaGAGTCCAGAGATGAGAAAC +
Preference number: 2 (lower is better)
Translates to: GTTEHTYLGRVCSDILVWAQEDR*SPEMRN
Trigger: GTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGC...CCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR GCA 90 bp TGTGTGGTATGTGGTATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTTTTCTCCCTGGGAAGTaGAGCACATACCCCAACACA +
Preference number: 2 (lower is better)
Translates to: CVVCGINLNLWSHEGHFPFLPGK*STYPNT
Trigger: TGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAA...AGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTATACCACATACCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CCA 90 bp GGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGAAAGTACTTCGTCTGTaGAATTCGAGGCTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: GTTEHTYLGRVCSDILVWKVLRL*NSRLSL
Trigger: CAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTT...CCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR TCA 90 bp ATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTTGTTGTAAGTGTAGTTCGTATGGAAAGTTCTaGCAGGTTTTCTCCCTGGGA +
Preference number: 2 (lower is better)
Translates to: INLNLWSHEGHFPCCKCSSYGKF*QVFSLG
Trigger: TCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGA...ACTACACTTACAACAAGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR TCA 90 bp ATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTTGTTGTAAGTGTAGTTGGAAGGGTGTGTTCTaGTATACTCGTATGGAAAGT +
Preference number: 2 (lower is better)
Translates to: INLNLWSHEGHFPCCKCSWKGVF*YTRMES
Trigger: ACTTTCCATACGAGTATATCAGAACACACCCTTCCA...ACTACACTTACAACAAGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR GCA 72 bp AGGCAGTTGCGGTCCCGGGACAGGATTCGGACACTCTaGAGCCAGATGACACGGTGGGAGGGTGGCAAGCCC +
Preference number: 3 (lower is better)
Translates to: RQLRSRDRIRTL*SQMTRWEGGKP
Trigger: GGGCTTGCCACCCTCCCACCGTGTCATCTGGCTGCAGAGTGTCCGAATCCTGTCCCGGGACCGCAACTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR TCA 72 bp GGTCCCGGGACAGGATTCGGACACTCTGCAGCCAGATaGCACGGTGGGAGGGTGGCAAGCCCTGTTCCAGGA +
Preference number: 3 (lower is better)
Translates to: GPGTGFGHSAAR*HGGRVASPVPG
Trigger: TCCTGGAACAGGGCTTGCCACCCTCCCACCGTGTCATCTGGCTGCAGAGTGTCCGAATCCTGTCCCGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR TCA 72 bp GGAAGCTCCTCTCACGGTACAGCCCCACACGCTCTGTaGGCTTCACCACTAGGCGGGCCTCTGCTGCCAGCA +
Preference number: 3 (lower is better)
Translates to: GSSSHGTAPHAL*ASPLGGPLLPA
Trigger: TGCTGGCAGCAGAGGCCCGCCTAGTGGTGAAGCTCACAGAGCGTGTGGGGCTGTACCGTGAGAGGAGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR GCA 72 bp TGTGTGCACCCACACCCAAACCCCTGCCCTCCCATATaGTCTTCTGTGTGCCCAGGTAGGCCCTGCCCTCAG +
Preference number: 3 (lower is better)
Translates to: CVHPHPNPCPPI*SSVCPGRPCPQ
Trigger: CTGAGGGCAGGGCCTACCTGGGCACACAGAAGAGCATATGGGAGGGCAGGGGTTTGGGTGTGGGTGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR CCA 72 bp GACAGGATTCGGACACTCTGCAGCCAGATGACACGGTaGGAGGGTGGCAAGCCCTGTTCCAGGACGGAGACC +
Preference number: 3 (lower is better)
Translates to: DRIRTLCSQMTR*EGGKPCSRTET
Trigger: GGTCTCCGTCCTGGAACAGGGCTTGCCACCCTCCCACCGTGTCATCTGGCTGCAGAGTGTCCGAATCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR CAA 90 bp TGTCTGCGGACTCTGGGACGGACCCCTCAGAGACAGAGATGTCAGCATAGCAGGAACGGGTCCAGGCAGTaGCGGTCCCGGGACAGGATT +
Preference number: 3 (lower is better)
Translates to: CLRTLGRTPQRQRCQHSRNGSRQ*RSRDRI
Trigger: AATCCTGTCCCGGGACCGCAACTGCCTGGACCCGTT...CCTGCTATGCTGACATCTCTGTCTCTGAGGGGTCCGTCCCAGAGTCCGCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR GCA 72 bp ACTGGCTCTGCCAGTGTGCCAATCCCAGATGGTGCTTaGTTTGTGTGCACCCACACCCAAACCCCTGCCCTC +
Preference number: 3 (lower is better)
Translates to: TGSASVPIPDGA*FVCTHTQTPAL
Trigger: GAGGGCAGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR GCA 72 bp CTTTCAGCTCCTGAAACAGCTGCTGGCGCACATCGGTaGGGAGTGCCGTTAGCAGGAAGAGGAGCCGCAAGT +
Preference number: 3 (lower is better)
Translates to: LSAPETAAGAHR*GVPLAGRGAAS
Trigger: ACTTGCGGCTCCTCTTCCTGCTAACGGCACTCCGCACCGATGTGCGCCAGCAGCTGTTTCAGGAGCTGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR CCA 72 bp ACCAGCAGCTCCGCCAGTCTCTTCCGGTCCTCCTGTTaGGCATCATCAAACGTGAAGCTCTGGGAGTGCTGC +
Preference number: 3 (lower is better)
Translates to: TSSSASLFRSSC*ASSNVKLWECC
Trigger: GCAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGACTGGCGGAGCTGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR CCA 72 bp AGGAAGAGGAGCCGCAAGTCAAAGAACTGGACATCGTaGGGGAAGCTCCTCTCACGGTACAGCCCCACACGC +
Preference number: 3 (lower is better)
Translates to: RKRSRKSKNWTS*GKLLSRYSPTR
Trigger: GCGTGTGGGGCTGTACCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGCGGCTCCTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR GCA 72 bp GCCAGTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTaGACCCACACCCAAACCCCTGCCCTCCCATATGCT +
Preference number: 3 (lower is better)
Translates to: ASVPIPDGACFV*THTQTPALPYA
Trigger: AGCATATGGGAGGGCAGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR GCA 72 bp ACACACTGGCTCTGCCAGTGTGCCAATCCCAGATGGTaGTTGCTTTGTGTGCACCCACACCCAAACCCCTGC +
Preference number: 3 (lower is better)
Translates to: THWLCQCANPRW*LLCVHPHPNPC
Trigger: GCAGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR CCA 72 bp CGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGAAGTaGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCC +
Preference number: 3 (lower is better)
Translates to: RESREGVSKMEK*GRVWIQWDVAS
Trigger: GGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCATCTTAGAAACCCCTTCTCTTGACTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.5
ENST00000527696.5
3UTR CCA 72 bp GCCGTTAGCAGGAAGAGGAGCCGCAAGTCAAAGAACTaGACATCGTGGGGGAAGCTCCTCTCACGGTACAGC +
Preference number: 3 (lower is better)
Translates to: AVSRKRSRKSKN*TSWGKLLSRYS
Trigger: GCTGTACCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGCGGCTCCTCTTCCTGCTAACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR GCA 72 bp TGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTaGCAATCCCAGATGGTGCTTGCTTTGTGTGCACCC +
Preference number: 3 (lower is better)
Translates to: CSTYPNTLALPV*QSQMVLALCAP
Trigger: GGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR GCA 72 bp CAGGCACTTGAGGGACTCCAGTACAACATCCATGTCTaGGGACTCTGGGACGGACCCCTCAGAGACAGAGAT +
Preference number: 3 (lower is better)
Translates to: QALEGLQYNIHV*GLWDGPLRDRD
Trigger: ATCTCTGTCTCTGAGGGGTCCGTCCCAGAGTCCGCAGACATGGATGTTGTACTGGAGTCCCTCAAGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR CCA 72 bp TTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTaGCTCTGCCAGTGTGCCAATCCCAGATGGTGCTTG +
Preference number: 3 (lower is better)
Translates to: FSLGSAAHTPTH*LCQCANPRWCL
Trigger: CAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR CCA 72 bp GAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATaGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATG +
Preference number: 3 (lower is better)
Translates to: EQNGSQEKGFLR*RSGGGCGSSGM
Trigger: CATCCCACTGGATCCACACCCGCCCCCACTTCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.5
ENST00000527696.5
3UTR CCA 72 bp GAGGGACTCCAGTACAACATCCATGTCTGCGGACTCTaGGACGGACCCCTCAGAGACAGAGATGTCAGCATA +
Preference number: 3 (lower is better)
Translates to: EGLQYNIHVCGL*DGPLRDRDVSI
Trigger: TATGCTGACATCTCTGTCTCTGAGGGGTCCGTCCCAGAGTCCGCAGACATGGATGTTGTACTGGAGTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR-3UTR CAA 90 bp CTAGCACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATGTGGCTTCCCCAGGTaGCAACCCCAAGGAAGTCTC +
Preference number: 3 (lower is better)
Translates to: LAQEDRCSPEMRNWTRGKCGFPR*QPQGSL
Trigger: GAGACTTCCTTGGGGTTGCAACCTGGGGAAGCCACA...TTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CAA 90 bp AGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTGCCAATCCCAGATGGAGCACAAGAAGACCGTaGCAGTCCAGAGATGAGAAA +
Preference number: 3 (lower is better)
Translates to: SAAHTPTHWLCQCANPRWSTRRP*QSRDEK
Trigger: TTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCT...CCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR TCA 72 bp GGAGAATGTCTAAGAGGCCTCCAGCCCTGCGCTCAGTaGAGACAGGACAGGAACAACAGAGCATACATACCT +
Preference number: 3 (lower is better)
Translates to: GECLRGLQPCAQ*RQDRNNRAYIP
Trigger: AGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGCAGGGCTGGAGGCCTCTTAGACATTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR TCA 72 bp GTCTCTTCCGGTCCTCCTGTTGGGCATCATCAAACGTaGAGCTCTGGGAGTGCTGCAGAGAGAACTAGTGAA +
Preference number: 3 (lower is better)
Translates to: VSSGPPVGHHQT*SSGSAAERTSE
Trigger: TTCACTAGTTCTCTCTGCAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
3UTR CCA 72 bp AAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTaGGCAGCTGAACGAGGACCAAGGAGAATGTCTAAG +
Preference number: 3 (lower is better)
Translates to: KPARTRALWILQ*AAERGPRRMSK
Trigger: CTTAGACATTCTCCTTGGTCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CAA 90 bp GCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGAAGTTGTGGCTTCCCCAGGTaGCAACCCCAAGGAAGTCTC +
Preference number: 3 (lower is better)
Translates to: ANHEQNGSQEKGFLRWRSCGFPR*QPQGSL
Trigger: GAGACTTCCTTGGGGTTGCAACCTGGGGAAGCCACA...ACTTCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CAA 90 bp GCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGCTGAACACATTCCTCTaGGCGCAGACAAAAGAAAGT +
Preference number: 3 (lower is better)
Translates to: ALSEDRTGTTEHTYLGRVLNTFL*AQTKES
Trigger: ACTTTCTTTTGTCTGCGCCAAGAGGAATGTGTTCAG...CACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR CCA 72 bp TCCTCTTGGCGCAGACAAAAGAAAGTACTTCGTCTGTaGAATTCGAGGCTGAGCCTGAGTTCTAGCACAAGA +
Preference number: 3 (lower is better)
Translates to: SSWRRQKKVLRL*NSRLSLSSSTR
Trigger: TCTTGTGCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTTCTTTTGTCTGCGCCAAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR CCA 72 bp TATACTCGTATGGAAAGTTCTGACAGGTTTTCTCCCTaGGAAGTGCAGCACATACCCCAACACACTGGCTCT +
Preference number: 3 (lower is better)
Translates to: YTRMESSDRFSP*EVQHIPQHTGS
Trigger: AGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR-3UTR CAA 90 bp GGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGCAGATGGTGCTTGCTTaGTGTGCACCCACACCCAAA +
Preference number: 3 (lower is better)
Translates to: GTTEHTYLGRVCSDILVWQMVLA*CAPTPK
Trigger: TTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTG...CCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR TCA 72 bp AGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATaGACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAG +
Preference number: 3 (lower is better)
Translates to: SPEMRNWTRGKS*TERESREGVSK
Trigger: CTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.5
ENST00000527696.5
3UTR TCA 72 bp GAAGGGTGTGTTCTGATATACTCGTATGGAAAGTTCTaGCAGGTTTTCTCCCTGGGAAGTGCAGCACATACC +
Preference number: 3 (lower is better)
Translates to: EGCVLIYSYGKF*QVFSLGSAAHT
Trigger: GGTATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATATCAGAACACACCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR CCA 72 bp ACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATaGAAAGTTCTGACAGGTTTTCTCCCTGGGAAGTGC +
Preference number: 3 (lower is better)
Translates to: TYLGRVCSDILV*KVLTGFLPGKC
Trigger: GCACTTCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATATCAGAACACACCCTTCCAAGGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR TCA 72 bp AACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTaGTATACTCGTATGGAAAGTTCTGACAGGTTTTCT +
Preference number: 3 (lower is better)
Translates to: NNRAYIPWKGVF*YTRMESSDRFS
Trigger: AGAAAACCTGTCAGAACTTTCCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR CAA 72 bp TGCAGGCTCTGGCGGCTGGTGAACGGGTCCAGGCAGTaGCGGTCCCGGGACAGGATTCGGACACTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CRLWRLVNGSRQ*RSRDRIRTLCS
Trigger: GCTGCAGAGTGTCCGAATCCTGTCCCGGGACCGCAACTGCCTGGACCCGTTCACCAGCCGCCAGAGCCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR CCA 90 bp ACGGGTCCAGGCAGTTGCGGTCCCGGGACAGGATTCGGACACTCTGCAGCCAGAAGTGCCTGCAGGCTCTaGCGGCTGGTGAACGGGTCC +
Preference number: 4 (lower is better)
Translates to: TGPGSCGPGTGFGHSAARSACRL*RLVNGS
Trigger: GGACCCGTTCACCAGCCGCCAGAGCCTGCAGGCACT...TCTGGCTGCAGAGTGTCCGAATCCTGTCCCGGGACCGCAACTGCCTGGACCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR TCA 90 bp CCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGGCTCTGGCGGCTGGTaGACGGGTCCAGGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: PQVATPRKSLEAAPVLMGGSGGW*TGPGSC
Trigger: GCAACTGCCTGGACCCGTTCACCAGCCGCCAGAGCC...CCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp TTGAGGATCTCCATGGCCCGCTCAGTCTCTTGGGAAGGAAGGAGCGTGGGTGGGGGCTCTGGCGGCTGGTaGACGGGTCCAGGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LRISMARSVSWEGRSVGGGSGGW*TGPGSC
Trigger: GCAACTGCCTGGACCCGTTCACCAGCCGCCAGAGCC...CCCACCCACGCTCCTTCCTTCCCAAGAGACTGAGCGGGCCATGGAGATCCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR TCA 90 bp CTGGACATCGTGGGGGAAGCTCCTCTCACGGTACAGCCCCACACGCTCTGTGAGGTGCCACAGGGCTGCTaGGCACGAGGTTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: LDIVGEAPLTVQPHTLCEVPQGC*ARGCTG
Trigger: GCCTGTGCAACCTCGTGCTCAGCAGCCCTGTGGCAC...CTCACAGAGCGTGTGGGGCTGTACCGTGAGAGGAGCTTCCCCCACGATGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR TCA 90 bp AGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCCAGGTTGCAACCCCCGAGTCGAGGGGCTaGGTCGCTCTGAACCGAACT +
Preference number: 4 (lower is better)
Translates to: RSGGGCGSSGMWLPQVATPESRG*VALNRT
Trigger: AGTTCGGTTCAGAGCGACTCAGCCCCTCGACTCGGG...GGTTGCAACCTGGGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR TCA 90 bp ACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGAAGAGCGGCTCTGGCGGCTGGTaGACGGGTCCAGGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: TPRKSLEAAPVLMGEQKSGSGGW*TGPGSC
Trigger: GCAACTGCCTGGACCCGTTCACCAGCCGCCAGAGCC...GCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp TTTGAGGATCTCCATGGCCCGCTCAGTCTCTTGGGAAGGAAGGAGCGTGGGTGGAGGATCCGCGTCCGCTaGTGCGGGCGGCCTATTGGC +
Preference number: 4 (lower is better)
Translates to: FEDLHGPLSLLGRKERGWRIRVR*CGRPIG
Trigger: GCCAATAGGCCGCCCGCATCAGCGGACGCGGATCCT...CCACCCACGCTCCTTCCTTCCCAAGAGACTGAGCGGGCCATGGAGATCCTCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR GCA 90 bp AGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCCAGGTTGCAACCTGCCCAGGTAGGCCCTaGCCTCAGGCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RSGGGCGSSGMWLPQVATCPGRP*PQAAAS
Trigger: AGAAGCTGCTGCCTGAGGGCAGGGCCTACCTGGGCA...GGTTGCAACCTGGGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GCTGCTGGCGCACATCGGTGCGGAGTGCCGTTAGCAGGAAGAGGAGCCGCAAGTCATGTCTGCGGACTCTaGGACGGACCCCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: AAGAHRCGVPLAGRGAASHVCGL*DGPLRD
Trigger: GTCTCTGAGGGGTCCGTCCCAGAGTCCGCAGACATG...ACTTGCGGCTCCTCTTCCTGCTAACGGCACTCCGCACCGATGTGCGCCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR CCA 90 bp CTGCAGCCAGATGACACGGTGGGAGGGTGGCAAGCCCTGTTCCAGGACGGAGACGCCCGCTCAGTCTCTTaGGAAGGAAGGAGCGTGGGT +
Preference number: 4 (lower is better)
Translates to: LQPDDTVGGWQALFQDGDARSVS*EGRSVG
Trigger: ACCCACGCTCCTTCCTTCCCAAGAGACTGAGCGGGC...GTCTCCGTCCTGGAACAGGGCTTGCCACCCTCCCACCGTGTCATCTGGCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR TCA 90 bp CCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGCACTCTGCAGCCAGATaGCACGGTGGGAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PQVATPRKSLEAAPVLMGHSAAR*HGGRVA
Trigger: TGCCACCCTCCCACCGTGTCATCTGGCTGCAGAGTG...CCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp AGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCCAGGTTGCAACCGGGTCCGAGGAGAGCTaGTGCTCCATAGTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: RSGGGCGSSGMWLPQVATGSEES*CSIVSH
Trigger: GTGCGAGACTATGGAGCAGCAGCTCTCCTCGGACCC...GGTTGCAACCTGGGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR GCA 90 bp TTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTGCCTGCCACCCAACGGGTaGACCCCCACTCTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: FLPGKCSTYPNTLALPVCLPPNG*TPTLPA
Trigger: TGCGGGGAGAGTGGGGGTGCACCCGTTGGGTGGCAG...GCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527696.5
CDS-3UTR TCA 90 bp GAGGAGCCGCAAGTCAAAGAACTGGACATCGTGGGGGAAGCTCCTCTCACGGTAGCCCCACACGCTCTGTaGGCTTCACCACTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: EEPQVKELDIVGEAPLTVAPHAL*ASPLGG
Trigger: CCCGCCTAGTGGTGAAGCTCACAGAGCGTGTGGGGC...TACCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGCGGCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR TCA 90 bp TCCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGTGCAGGGACGTAAGATaGCCCCGGGGACTCATCCCC +
Preference number: 4 (lower is better)
Translates to: SPGCNPKEVSGSSTSPDGCRDVR*PRGLIP
Trigger: GGGGATGAGTCCCCGGGGTCATCTTACGTCCCTGCA...CCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR TCA 90 bp CCTGTTCCAGGACGGAGACCAGCAGCTCCGCCAGTCTCTTCCGGTCCTCCTGTTACTCCTTTCAGCTCCTaGAACAGCTGCTGGCGCACA +
Preference number: 4 (lower is better)
Translates to: PVPGRRPAAPPVSSGPPVTPFSS*NSCWRT
Trigger: TGTGCGCCAGCAGCTGTTTCAGGAGCTGAAAGGAGT...AACAGGAGGACCGGAAGAGACTGGCGGAGCTGCTGGTCTCCGTCCTGGAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR GCA 90 bp CAGTCTCTTCCGGTCCTCCTGTTGGGCATCATCAAACGTGAAGCTCTGGGAGTGCGTCTCCACGGCTTCTaGAACCGCCCGGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: QSLPVLLLGIIKREALGVRLHGF*NRPGLH
Trigger: ATGGAGCCCCGGGCGGTTGCAGAAGCCGTGGAGACG...CACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR GCA 90 bp CTGGACATCGTGGGGGAAGCTCCTCTCACGGTACAGCCCCACACGCTCTGTGAGAGGATTCGGACACTCTaGAGCCAGATGACACGGTGG +
Preference number: 4 (lower is better)
Translates to: LDIVGEAPLTVQPHTLCERIRTL*SQMTRW
Trigger: CCACCGTGTCATCTGGCTGCAGAGTGTCCGAATCCT...CTCACAGAGCGTGTGGGGCTGTACCGTGAGAGGAGCTTCCCCCACGATGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR GCA 90 bp ATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCCAGGTTGCCCAACACACTGGCTCTaGCAGTGTGCCAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: MEKWGRVWIQWDVASPGCPTHWL*QCANPR
Trigger: TCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGG...GCAACCTGGGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp ACTCTGGGACGGACCCCTCAGAGACAGAGATGTCAGCATAGCAGGCTAGTGCCTGACACGGTGGGAGGGTaGCAAGCCCTGTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TLGRTPQRQRCQHSRLVPDTVGG*QALFQD
Trigger: GTCCTGGAACAGGGCTTGCCACCCTCCCACCGTGTC...AGGCACTAGCCTGCTATGCTGACATCTCTGTCTCTGAGGGGTCCGTCCCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR CCA 90 bp CACTTTGAGGATCTCCATGGCCCGCTCAGTCTCTTGGGAAGGAAGGAGCGTGGGAGCCAGATGACACGGTaGGAGGGTGGCAAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: HFEDLHGPLSLLGRKERGSQMTR*EGGKPC
Trigger: ACAGGGCTTGCCACCCTCCCACCGTGTCATCTGGCT...CCCACGCTCCTTCCTTCCCAAGAGACTGAGCGGGCCATGGAGATCCTCAAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR CCA 90 bp TTTCTAAGATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCCAGGAACTTCCTGGCTaGGCGGTGCATCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: FLRWRSGGGCGSSGMWLPQELPG*AVHPGT
Trigger: TGTGCCCGGATGCACCGCCCAGCCAGGAAGTTCCTG...GGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCATCTTAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAACCCCTGCAGGAACTTCCTGGCTaGGCGGTGCATCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: VCQSQMVLALCAPTPKPLQELPG*AVHPGT
Trigger: TGTGCCCGGATGCACCGCCCAGCCAGGAAGTTCCTG...CAGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTCAGCACCTGGGGAGGTaGCCATCCCTGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VFSLGSAAHTPTHWLCQCQHLGR*PSLGLQ
Trigger: CTGAAGGCCCAGGGATGGCCACCTCCCCAGGTGCTG...ACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR CCA 90 bp GTCACCCCCAGCGTCAGCTCCAGTGTGTCAGTTAGCAGGCGCACTCCTTTCAGCGGCAGCAGCCACTCCTaGTTGTATGACCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VTPSVSSSVSVSRRTPFSGSSHS*LYDRRA
Trigger: AGCTCTGCGGTCATACAACCAGGAGTGGCTGCTGCC...GCTGAAAGGAGTGCGCCTGCTAACTGACACACTGGAGCTGACGCTGGGGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR CCA 90 bp AGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCCAGGTTGCAACCTGGGGAAAGGTGCAGTaGGGCTGGAGAGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: RSGGGCGSSGMWLPQVATWGKVQ*GWRACQ
Trigger: TTGACAAGCTCTCCAGCCCCACTGCACCTTTCCCCA...GGTTGCAACCTGGGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524854.5
3UTR CAA 72 bp CACTGGCTCTGCCAGTGTGCCAATCCCAGATGGTGCTaGCTTTGTGTGCACCCACACCCAAACCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: HWLCQCANPRWC*LCVHPHPNPCP
Trigger: AGGGCAGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
3UTR CAA 72 bp GACCAGCAGCTCCGCCAGTCTCTTCCGGTCCTCCTGTaGGGCATCATCAAACGTGAAGCTCTGGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: DQQLRQSLPVLL*GIIKREALGVL
Trigger: CAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGACTGGCGGAGCTGCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR TCA 90 bp CTGCAGCCAGATGACACGGTGGGAGGGTGGCAAGCCCTGTTCCAGGACGGAGACCCACTCCTGGTTGTATaGCCGCAGAGCTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: LQPDDTVGGWQALFQDGDPLLVV*PQSFHN
Trigger: ATTATGGAAGCTCTGCGGTCATACAACCAGGAGTGG...GTCTCCGTCCTGGAACAGGGCTTGCCACCCTCCCACCGTGTCATCTGGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR TCA 90 bp GATTCGGACACTCTGCAGCCAGATGACACGGTGGGAGGGTGGCAAGCCCTGTTCGGGCATCATCAAACGTaGAGCTCTGGGAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: DSDTLQPDDTVGGWQALFGHHQT*SSGSAA
Trigger: TGCAGCACTCCCAGAGCTTCACGTTTGATGATGCCC...GAACAGGGCTTGCCACCCTCCCACCGTGTCATCTGGCTGCAGAGTGTCCGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR GCA 90 bp GCTCCAGTGTGTCAGTTAGCAGGCGCACTCCTTTCAGCTCCTGAAACAGCTGCTACGGGTCCAGGCAGTTaGGGTCCCGGGACAGGATTC +
Preference number: 4 (lower is better)
Translates to: APVCQLAGALLSAPETAATGPGS*GPGTGF
Trigger: GAATCCTGTCCCGGGACCGCAACTGCCTGGACCCGT...AGCAGCTGTTTCAGGAGCTGAAAGGAGTGCGCCTGCTAACTGACACACTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR GCA 90 bp AAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGAACGGGTCCAGGCAGTTaGGGTCCCGGGACAGGATTC +
Preference number: 4 (lower is better)
Translates to: KPARTRALWILQWAAERGTGPGS*GPGTGF
Trigger: GAATCCTGTCCCGGGACCGCAACTGCCTGGACCCGT...TCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GGGTTTCTAAGATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTTGCTGCCAGCATCTGTaGCACAGGGCTGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GFLRWRSGGGCGSSGMWLCCQHL*HRAAEH
Trigger: GTGCTCAGCAGCCCTGTGGCACAGATGCTGGCAGCA...AAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCATCTTAGAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GCAAGTCAAAGAACTGGACATCGTGGGGGAAGCTCCTCTCACGGTACAGCCCCATGCTGCCAGCATCTGTaGCACAGGGCTGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: ASQRTGHRGGSSSHGTAPCCQHL*HRAAEH
Trigger: GTGCTCAGCAGCCCTGTGGCACAGATGCTGGCAGCA...TGGGGCTGTACCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR GCA 90 bp GTTGCACAGGCACTTGAGGGACTCCAGTACAACATCCATGTCTGCGGACTCTGGGCTGGCGCACATCGGTaGGGAGTGCCGTTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VAQALEGLQYNIHVCGLWAGAHR*GVPLAG
Trigger: TCCTGCTAACGGCACTCCGCACCGATGTGCGCCAGC...CCAGAGTCCGCAGACATGGATGTTGTACTGGAGTCCCTCAAGTGCCTGTGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR GCA 90 bp TCGGTGCGGAGTGCCGTTAGCAGGAAGAGGAGCCGCAAGTCAAAGAACTGGACAGCGATCATCACACAGTaGCGGAGAAGGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SVRSAVSRKRSRKSKNWTAIITQ*RRRVPR
Trigger: CCTGGGGACCCTTCTCCGGCACTGTGTGATGATCGC...TGTCCAGTTCTTTGACTTGCGGCTCCTCTTCCTGCTAACGGCACTCCGCACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR GCA 90 bp GGGTTTCTAAGATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTTTCCTGGCTGGGCGGTaGATCCGGGCACATTCAGTC +
Preference number: 4 (lower is better)
Translates to: GFLRWRSGGGCGSSGMWLFLAGR*IRAHSV
Trigger: GACTGAATGTGCCCGGATGCACCGCCCAGCCAGGAA...AAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCATCTTAGAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAACCCCTGGGGGAGCAGAAGAGCTaGCATCCTCAGTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VCQSQMVLALCAPTPKPLGEQKS*HPQSGS
Trigger: GGACCCTGACTGAGGATGGCAGCTCTTCTGCTCCCC...CAGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp TTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTGCAGCCAGATGACACGGTaGGAGGGTGGCAAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: FLPGKCSTYPNTLALPVCSQMTR*EGGKPC
Trigger: ACAGGGCTTGCCACCCTCCCACCGTGTCATCTGGCT...GCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp CAGTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAACCCCCATGTCTGCGGACTCTaGGACGGACCCCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QCANPRWCLLCVHPHPNPHVCGL*DGPLRD
Trigger: GTCTCTGAGGGGTCCGTCCCAGAGTCCGCAGACATG...GGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp TTTCTAAGATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCGCCCGCTCAGTCTCTTaGGAAGGAAGGAGCGTGGGT +
Preference number: 4 (lower is better)
Translates to: FLRWRSGGGCGSSGMWLPARSVS*EGRSVG
Trigger: ACCCACGCTCCTTCCTTCCCAAGAGACTGAGCGGGC...GGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCATCTTAGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp CCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGTCTAAGATGGAGAAGTaGGGGCGGGTGTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: PQVATPRKSLEAAPVLMGSKMEK*GRVWIQ
Trigger: CTGGATCCACACCCGCCCCCACTTCTCCATCTTAGA...CCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR TCA 90 bp CGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCACAAGAAGACCGTTGCAGGGGGCTGAGTCGCTCTaGACCGAACTGACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RLWNSRLSLSSSTRRPLQGAESL*TELTPL
Trigger: GAGAGGGGTCAGTTCGGTTCAGAGCGACTCAGCCCC...CTGCAACGGTCTTCTTGTGCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR TCA 90 bp ACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGAAGAGCCATGTGGCTCCAGGGTaGGGAGAACATCCAGACACT +
Preference number: 4 (lower is better)
Translates to: TPRKSLEAAPVLMGEQKSHVAPG*GEHPDT
Trigger: AGTGTCTGGATGTTCTCCTCACCCTGGAGCCACATG...GCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp GTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAACCCCTGCAGCCCTGCGCTCAGTaGAGACAGGACAGGAACAAC +
Preference number: 4 (lower is better)
Translates to: VCQSQMVLALCAPTPKPLQPCAQ*RQDRNN
Trigger: GTTGTTCCTGTCCTGTCTTCACTGAGCGCAGGGCTG...CAGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp TGCCAAAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGCGATCATCACACAGTaGCGGAGAAGGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: CQNQRELGHCGYYSGQLNAIITQ*RRRVPR
Trigger: CCTGGGGACCCTTCTCCGGCACTGTGTGATGATCGC...GTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp CCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTGCCAATCCCTGGCTCTGCCAGTGTaGCAATCCCAGATGGTGCTT +
Preference number: 4 (lower is better)
Translates to: PGKCSTYPNTLALPVCQSLALPV*QSQMVL
Trigger: AAGCACCATCTGGGATTGGCACACTGGCAGAGCCAG...GGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp ATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCCAGGTTGCTTTCTCCCTGGGAAGTaGAGCACATACCCCAACACA +
Preference number: 4 (lower is better)
Translates to: MEKWGRVWIQWDVASPGCFLPGK*STYPNT
Trigger: TGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAA...GCAACCTGGGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp CTGCCAGTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAATCAGGCAGCAGCCACTaGTCAGAACGGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPVCQSQMVLALCAPTPKSGSSH*SERMAG
Trigger: CCCTGCCATCCGTTCTGAGCAGTGGCTGCTGCCTGA...TTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527696.5
CDS-3UTR CCA 90 bp CAGTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAACCCCGTGACCCGCGCTTCTTaGGCCAGAAGTTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: QCANPRWCLLCVHPHPNPVTRAS*ARSSNR
Trigger: CCTGTTGGAACTTCTGGCCCAAGAAGCGCGGGTCAC...GGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR CCA 90 bp TTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTGCGGCCTGAGGCAGAACTaGCGGCTCGGAGGTTTTAAG +
Preference number: 4 (lower is better)
Translates to: FLPGKCSTYPNTLALPVCGLRQN*RLGGFK
Trigger: CTTAAAACCTCCGAGCCGCCAGTTCTGCCTCAGGCC...GCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR CCA 90 bp ACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGGGGCGCAGCGTCTGGTaGCGCTTTAAGGGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: TRRPLQSRDEKLDQRQIMGRSVW*RFKGAR
Trigger: CCGCGCCCCCTTAAAGCGCCACCAGACGCTGCGCCC...CATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR CCA 90 bp GGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGAGGGCGCGGCGTCTGGTaGCGCTTTAACGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: GPEANHEQNGSQEKGFLRGRGVW*RFNGAQ
Trigger: CTGCGCCCCGTTAAAGCGCCACCAGACGCCGCGCCC...TCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR CCA 90 bp GTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGCTCTGGGAGTGCTCCTaGTTGTATGACCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VATPRKSLEAAPVLMGEQLWECS*LYDRRA
Trigger: AGCTCTGCGGTCATACAACCAGGAGCACTCCCAGAG...CTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR CCA 90 bp AGGTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTCGGGTGTGGATCCAGTaGGATGTGGCTTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RFSPWEVQHIPQHTGSASRVWIQ*DVASPG
Trigger: ACCTGGGGAAGCCACATCCCACTGGATCCACACCCG...ACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp CATGTCTGCGGACTCTGGGACGGACCCCTCAGAGACAGAGATGTCAGCATAGCAATGCGGGCGGCCTATTaGCCTCTAACTCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HVCGLWDGPLRDRDVSIAMRAAY*PLTQAA
Trigger: TGCTGCCTGAGTTAGAGGCCAATAGGCCGCCCGCAT...TGCTATGCTGACATCTCTGTCTCTGAGGGGTCCGTCCCAGAGTCCGCAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR CCA 90 bp CTTCCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGATGCGGGCGGCCTATTaGCCTCTAACTCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LPQVATPRKSLEAAPVLMMRAAY*PLTQAA
Trigger: TGCTGCCTGAGTTAGAGGCCAATAGGCCGCCCGCAT...CATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527696.5
CDS-3UTR TCA 90 bp AAAGAACTGGACATCGTGGGGGAAGCTCCTCTCACGGTACAGCCCCACACGCTCGGTTGCACAGGCACTTaGGGGACTCCAGTACAACAT +
Preference number: 4 (lower is better)
Translates to: KELDIVGEAPLTVQPHTLGCTGT*GTPVQH
Trigger: ATGTTGTACTGGAGTCCCTCAAGTGCCTGTGCAACC...GAGCGTGTGGGGCTGTACCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR TCA 90 bp AGCCTGAGTTCTAGCACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACGTGCCACAGGGCTGCTaGGCACGAGGTTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: SLSSSTRRPLQSRDEKLDVPQGC*ARGCTG
Trigger: GCCTGTGCAACCTCGTGCTCAGCAGCCCTGTGGCAC...GTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAGAACTCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp AGTTCTAGCACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGGCCCCACACGCTCTGTaGGCTTCACCACTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SSSTRRPLQSRDEKLDQRAPHAL*ASPLGG
Trigger: CCCGCCTAGTGGTGAAGCTCACAGAGCGTGTGGGGC...CCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp CTAGCACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAAGCCCCACACGCTCTGTaGGCTTCACCACTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LAQEDRCSPEMRNWTRGKAPHAL*ASPLGG
Trigger: CCCGCCTAGTGGTGAAGCTCACAGAGCGTGTGGGGC...TTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp AAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCAGGATCCGCGTCCGCTaGTGCGGGCGGCCTATTGGC +
Preference number: 4 (lower is better)
Translates to: KLDQRQIMNRTGVKRRGFRIRVR*CGRPIG
Trigger: GCCAATAGGCCGCCCGCATCAGCGGACGCGGATCCT...GAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527696.5
CDS-3UTR TCA 90 bp AAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGAAGAGCTGCCAGGGCATCATCAAACGTaGAGCTCTGGGAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KEVSGSSTSPDGGAEELPGHHQT*SSGSAA
Trigger: TGCAGCACTCCCAGAGCTTCACGTTTGATGATGCCC...TGGCAGCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527696.5
CDS-3UTR GCA 90 bp AACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGACAGGATTCGGACACTCTaGAGCCAGATGACACGGTGG +
Preference number: 4 (lower is better)
Translates to: NQRELGHCGYYSGQLNEDRIRTL*SQMTRW
Trigger: CCACCGTGTCATCTGGCTGCAGAGTGTCCGAATCCT...GTCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp CCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGCGGTCACAGGGTTTATaGTGGCTTTGGCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PQVATPRKSLEAAPVLMGRSQGL*WLWLPC
Trigger: ACAAGGAAGCCAAAGCCAGCATAAACCCTGTGACCG...CCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR GCA 90 bp AGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCCAGGTTGCAACCGCACAAGAAGACCGTTaGAGTCCAGAGATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: RSGGGCGSSGMWLPQVATAQEDR*SPEMRN
Trigger: GTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGC...GGTTGCAACCTGGGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR GCA 90 bp ACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGAAGAGCATCCCAGATGGTGCTTaGTTTGTGTGCACCCACACC +
Preference number: 4 (lower is better)
Translates to: TPRKSLEAAPVLMGEQKSIPDGA*FVCTHT
Trigger: GGTGTGGGTGCACACAAAGCAAGCACCATCTGGGAT...GCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GCACATACCCCAACACACTGGCTCTGCCAGTGTGCCAATCCCAGATGGTGCTTGCCAACACACTGGCTCTaGCAGTGTGCCAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: AHTPTHWLCQCANPRWCLPTHWL*QCANPR
Trigger: TCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGG...CAAGCACCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp AGACAAAAGAAAGTACTTCGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCGGGGCCACCCGTCCCTaGCCCTTTACCCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RQKKVLRLWNSRLSLSSSGATRP*PFTPWA
Trigger: GGCCCAAGGGGTAAAGGGGCAGGGACGGGTGGCCCC...GCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTTCTTTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527696.5
CDS-3UTR CCA 90 bp AAGAGGAGCCGCAAGTCAAAGAACTGGACATCGTGGGGGAAGCTCCTCTCACGGAAGAACTGGACATCGTaGGGGAAGCTCCTCTCACGG +
Preference number: 4 (lower is better)
Translates to: KRSRKSKNWTSWGKLLSRKNWTS*GKLLSR
Trigger: CCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTT...CCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGCGGCTCCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR CCA 90 bp GCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGCCTTCAGGAACTTCCTaGCTGGGCGGTGCATCCGGG +
Preference number: 4 (lower is better)
Translates to: ALSEDRTGTTEHTYLGRVPSGTS*LGGASG
Trigger: CCCGGATGCACCGCCCAGCCAGGAAGTTCCTGAAGG...CACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp TCCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGCTCATCCCCATTGGCTaGATGACTCTGTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SPGCNPKEVSGSSTSPDGLIPIG*MTLFLE
Trigger: CTCCAGGAACAGAGTCATCCAGCCAATGGGGATGAG...CCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GGACCAAGGAGAATGTCTAAGAGGCCTCCAGCCCTGCGCTCAGTGAAGACAGGATCTAAGATGGAGAAGTaGGGGCGGGTGTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: GPRRMSKRPPALRSVKTGSKMEK*GRVWIQ
Trigger: CTGGATCCACACCCGCCCCCACTTCTCCATCTTAGA...TCCTGTCTTCACTGAGCGCAGGGCTGGAGGCCTCTTAGACATTCTCCTTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp TCCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGAAGGGGTTTCTAAGATaGAGAAGTGGGGGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: SPGCNPKEVSGSSTSPDGKGFLR*RSGGGC
Trigger: ACACCCGCCCCCACTTCTCCATCTTAGAAACCCCTT...CCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CCA 90 bp ATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCCAGGTTGCAAAGTACTTCGTCTGTaGAATTCGAGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: MEKWGRVWIQWDVASPGCKVLRL*NSRLSL
Trigger: CAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTT...GCAACCTGGGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
3UTR CAA 72 bp GTGTCGGTAAAGGGCAGCGTCTCGTCCACCTCCCCCTaGATGGAGTCCAGGGTGATGTTGAAGAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: VSVKGSVSSTSP*MESRVMLKSTL
Trigger: CAAAGTGCTCTTCAACATCACCCTGGACTCCATCAAGGGGGAGGTGGACGAGACGCTGCCCTTTACCGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR TCA 90 bp GTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTCATGTGGCTCCAGGGTaGGGAGAACATCCAGACACT +
Preference number: 4 (lower is better)
Translates to: VFSLGSAAHTPTHWLCQCHVAPG*GEHPDT
Trigger: AGTGTCTGGATGTTCTCCTCACCCTGGAGCCACATG...ACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp TCTTGGCGCAGACAAAAGAAAGTACTTCGTCTGTGGAATTCGAGGCTGAGCCTGTGCAGGGACGTAAGATaGCCCCGGGGACTCATCCCC +
Preference number: 4 (lower is better)
Translates to: SWRRQKKVLRLWNSRLSLCRDVR*PRGLIP
Trigger: GGGGATGAGTCCCCGGGGTCATCTTACGTCCCTGCA...CAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTTCTTTTGTCTGCGCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp CCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGACCAGAGGCAAATCATaGACAGAACGGGAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: PQVATPRKSLEAAPVLMGTRGKS*TERESR
Trigger: TCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGT...CCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR TCA 90 bp AAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGAAGAGCTGCCAACTACAGTGGGCAGCTaGACGAGGACCAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: KEVSGSSTSPDGGAEELPTTVGS*TRTKEN
Trigger: ATTCTCCTTGGTCCTCGTTCAGCTGCCCACTGTAGT...TGGCAGCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp CAGTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAACCCCACTACAGTGGGCAGCTaGACGAGGACCAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: QCANPRWCLLCVHPHPNPTTVGS*TRTKEN
Trigger: ATTCTCCTTGGTCCTCGTTCAGCTGCCCACTGTAGT...GGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp AGGTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTAGGATTCGGACACTCTaGAGCCAGATGACACGGTGG +
Preference number: 4 (lower is better)
Translates to: RFSPWEVQHIPQHTGSASRIRTL*SQMTRW
Trigger: CCACCGTGTCATCTGGCTGCAGAGTGTCCGAATCCT...ACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp TTGCACAGGCACTTGAGGGACTCCAGTACAACATCCATGTCTGCGGACTCTGGGTACAACATCCATGTCTaGGGACTCTGGGACGGACCC +
Preference number: 4 (lower is better)
Translates to: LHRHLRDSSTTSMSADSGYNIHV*GLWDGP
Trigger: GGGTCCGTCCCAGAGTCCGCAGACATGGATGTTGTA...CCCAGAGTCCGCAGACATGGATGTTGTACTGGAGTCCCTCAAGTGCCTGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR GCA 90 bp GCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGTGCTGCCAGCATCTGTaGCACAGGGCTGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: ALSEDRTGTTEHTYLGRVCCQHL*HRAAEH
Trigger: GTGCTCAGCAGCCCTGTGGCACAGATGCTGGCAGCA...CACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGGCGATCATCACACAGTaGCGGAGAAGGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ALSEDRTGTTEHTYLGRVAIITQ*RRRVPR
Trigger: CCTGGGGACCCTTCTCCGGCACTGTGTGATGATCGC...CACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp CCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGAGCCTGTGTGTCTTGTaGAAACGCTTCTCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: PQVATPRKSLEAAPVLMGSLCVL*KRFSRK
Trigger: CTTCCTAGAGAAGCGTTTGCACAAGACACACAGGCT...CCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp TCCAGCCCTGCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTTTCCTGGCTGGGCGGTaGATCCGGGCACATTCAGTC +
Preference number: 4 (lower is better)
Translates to: SSPALSEDRTGTTEHTYLFLAGR*IRAHSV
Trigger: GACTGAATGTGCCCGGATGCACCGCCCAGCCAGGAA...AAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGCAGGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp ACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGAAGAGCCGGTCACAGGGTTTATaGTGGCTTTGGCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TPRKSLEAAPVLMGEQKSRSQGL*WLWLPC
Trigger: ACAAGGAAGCCAAAGCCAGCATAAACCCTGTGACCG...GCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR GCA 90 bp CCAAAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGATCCGAGGAGAGCTGCTaGTCCATAGTCTCGCACATG +
Preference number: 4 (lower is better)
Translates to: PKPARTRALWILQWAAERSEESC*SIVSHM
Trigger: CATGTGCGAGACTATGGAGCAGCAGCTCTCCTCGGA...TCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp CTTCCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGATCCCAGATGGTGCTTaGTTTGTGTGCACCCACACC +
Preference number: 4 (lower is better)
Translates to: LPQVATPRKSLEAAPVLMIPDGA*FVCTHT
Trigger: GGTGTGGGTGCACACAAAGCAAGCACCATCTGGGAT...CATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp AGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGACCATCCCTACACGCCTaGCACCCAACGGGTGCACCC +
Preference number: 4 (lower is better)
Translates to: RPLQSRDEKLDQRQIMNRPSLHA*HPTGAP
Trigger: GGGTGCACCCGTTGGGTGGCAGGCGTGTAGGGATGG...TCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527696.5
CDS-3UTR CCA 90 bp CTAGCACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAAGACACGGTGGGAGGGTaGCAAGCCCTGTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LAQEDRCSPEMRNWTRGKDTVGG*QALFQD
Trigger: GTCCTGGAACAGGGCTTGCCACCCTCCCACCGTGTC...TTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCAGTGCCTGCAGGCTCTaGCGGCTGGTGAACGGGTCC +
Preference number: 4 (lower is better)
Translates to: KLDQRQIMNRTGVKRRGFSACRL*RLVNGS
Trigger: GGACCCGTTCACCAGCCGCCAGAGCCTGCAGGCACT...GAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp CTGCCAGTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAAAAGAACTGGACATCGTaGGGGAAGCTCCTCTCACGG +
Preference number: 4 (lower is better)
Translates to: LPVCQSQMVLALCAPTPKKNWTS*GKLLSR
Trigger: CCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTT...TTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GAAAGTTCTGACAGGTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTTCATCCTCTGAGTACTaGCCCTCGGGCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ESSDRFSPWEVQHIPQHTSSSEY*PSGRPP
Trigger: AGGAGGCCGGCCCGAGGGCCAGTACTCAGAGGATGA...AGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AGGTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTTGGTCACCAGCTTCATaGCCTCGTGCTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RFSPWEVQHIPQHTGSASWSPAS*PRAPSA
Trigger: AGCAGAAGGAGCACGAGGCCATGAAGCTGGTGACCA...ACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGAAGAGCTGCCAAAGGGGTTTCTAAGATaGAGAAGTGGGGGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: KEVSGSSTSPDGGAEELPKGFLR*RSGGGC
Trigger: ACACCCGCCCCCACTTCTCCATCTTAGAAACCCCTT...TGGCAGCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CCA 90 bp TTTCTAAGATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCCATACCCCAACACACTaGCTCTGCCAGTGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: FLRWRSGGGCGSSGMWLPHTPTH*LCQCAN
Trigger: ATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATG...GGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCATCTTAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GGGTTTCTAAGATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTAAGGTGCAGTGGGGCTaGAGAGCTTGTCAAACATGG +
Preference number: 4 (lower is better)
Translates to: GFLRWRSGGGCGSSGMWLKVQWG*RACQTW
Trigger: CCATGTTTGACAAGCTCTCCAGCCCCACTGCACCTT...AAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCATCTTAGAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524854.5
CDS-3UTR CCA 90 bp ACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGAAGAGCCTCATCCCCATTGGCTaGATGACTCTGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: TPRKSLEAAPVLMGEQKSLIPIG*MTLFLL
Trigger: CAACAGGAACAGAGTCATCCAGCCAATGGGGATGAG...GCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524854.5
CDS-3UTR TCA 90 bp CAGTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAACCCCGTGCTCCTGGTTGTATaGCCGCAGAGCTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: QCANPRWCLLCVHPHPNPVLLVV*PQSFHN
Trigger: ATTATGGAAGCTCTGCGGTCATACAACCAGGAGCAC...GGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR TCA 90 bp AGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAGTGCCACAGGGCTGCTaGGCACGAGGTTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: RDEKLDQRQIMNRTGVKRVPQGC*ARGCTG
Trigger: GCCTGTGCAACCTCGTGCTCAGCAGCCCTGTGGCAC...TCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp AAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTGTGTCCTCATCCTCTaGGTACTGGCCCTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: KLDQRQIMNRTGVKRRGFCVLIL*VLALGP
Trigger: CGGCCCGAGGGCCAGTACTCAGAGGATGAGGACACA...GAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR TCA 90 bp GGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGTGTCCTCATCCTCTaGGTACTGGCCCTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: GPEANHEQNGSQEKGFLRCVLIL*VLALGP
Trigger: CGGCCCGAGGGCCAGTACTCAGAGGATGAGGACACA...TCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR TCA 90 bp AAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTGCAGGGACGTAAGATaGCCCCGGGGACTCATCCCC +
Preference number: 4 (lower is better)
Translates to: KLDQRQIMNRTGVKRRGFCRDVR*PRGLIP
Trigger: GGGGATGAGTCCCCGGGGTCATCTTACGTCCCTGCA...GAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR TCA 90 bp ATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCCAGGTTGCTGGAAGGGTGTGTTCTaGTATACTCGTATGGAAAGT +
Preference number: 4 (lower is better)
Translates to: MEKWGRVWIQWDVASPGCWKGVF*YTRMES
Trigger: ACTTTCCATACGAGTATATCAGAACACACCCTTCCA...GCAACCTGGGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp ACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGACGGGTCCAGGCAGTTaGGGTCCCGGGACAGGATTC +
Preference number: 4 (lower is better)
Translates to: TRRPLQSRDEKLDQRQIMTGPGS*GPGTGF
Trigger: GAATCCTGTCCCGGGACCGCAACTGCCTGGACCCGT...CATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp AGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGAGCTGGCGCACATCGGTaGGGAGTGCCGTTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RPLQSRDEKLDQRQIMNRAGAHR*GVPLAG
Trigger: TCCTGCTAACGGCACTCCGCACCGATGTGCGCCAGC...TCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp CGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCACAAGAAGACCGTTGCAGTCCGAGGAGAGCTGCTaGTCCATAGTCTCGCACATG +
Preference number: 4 (lower is better)
Translates to: RLWNSRLSLSSSTRRPLQSEESC*SIVSHM
Trigger: CATGTGCGAGACTATGGAGCAGCAGCTCTCCTCGGA...CTGCAACGGTCTTCTTGTGCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp TCTTGGCGCAGACAAAAGAAAGTACTTCGTCTGTGGAATTCGAGGCTGAGCCTGGGGTCCGAGGAGAGCTaGTGCTCCATAGTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: SWRRQKKVLRLWNSRLSLGSEES*CSIVSH
Trigger: GTGCGAGACTATGGAGCAGCAGCTCTCCTCGGACCC...CAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTTCTTTTGTCTGCGCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGACCAAGGGCACAAGAAGACCGTTaGAGTCCAGAGATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: ARTRALWILQWAAERGPRAQEDR*SPEMRN
Trigger: GTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGC...CCTTGGTCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGGCACAAGAAGACCGTTaGAGTCCAGAGATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: VATPRKSLEAAPVLMGEQAQEDR*SPEMRN
Trigger: GTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGC...CTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR GCA 90 bp TTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTGCTTTCTCCCTGGGAAGTaGAGCACATACCCCAACACA +
Preference number: 4 (lower is better)
Translates to: FLPGKCSTYPNTLALPVCFLPGK*STYPNT
Trigger: TGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAA...GCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GCCGTTAGCAGGAAGAGGAGCCGCAAGTCAAAGAACTGGACATCGTGGGGGAAGTTCCGGTCCTCCTGTTaGGCATCATCAAACGTGAAG +
Preference number: 4 (lower is better)
Translates to: AVSRKRSRKSKNWTSWGKFRSSC*ASSNVK
Trigger: CTTCACGTTTGATGATGCCCAACAGGAGGACCGGAA...CTTCCCCCACGATGTCCAGTTCTTTGACTTGCGGCTCCTCTTCCTGCTAACGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR CCA 90 bp GGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGAGTGCCTGCAGGCTCTaGCGGCTGGTGAACGGGTCC +
Preference number: 4 (lower is better)
Translates to: GQEQQSIHTLEGCVLIYSSACRL*RLVNGS
Trigger: GGACCCGTTCACCAGCCGCCAGAGCCTGCAGGCACT...CGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp CTAGCACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAACATGTCTGCGGACTCTaGGACGGACCCCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LAQEDRCSPEMRNWTRGKHVCGL*DGPLRD
Trigger: GTCTCTGAGGGGTCCGTCCCAGAGTCCGCAGACATG...TTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AGTCTCTTCCGGTCCTCCTGTTGGGCATCATCAAACGTGAAGCTCTGGGAGTGCCGCAAGTCAAAGAACTaGACATCGTGGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SLFRSSCWASSNVKLWECRKSKN*TSWGKL
Trigger: GAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGCG...GCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR CCA 90 bp AAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGACGCAAGTCAAAGAACTaGACATCGTGGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: KPARTRALWILQWAAERGRKSKN*TSWGKL
Trigger: GAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGCG...TCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCCCTTCAGGAACTTCCTaGCTGGGCGGTGCATCCGGG +
Preference number: 4 (lower is better)
Translates to: KLDQRQIMNRTGVKRRGFPSGTS*LGGASG
Trigger: CCCGGATGCACCGCCCAGCCAGGAAGTTCCTGAAGG...GAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp TCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGTCATCCTCTGAGTACTaGCCCTCGGGCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRDEKLDQRQIMNRTGVKSSSEY*PSGRPP
Trigger: AGGAGGCCGGCCCGAGGGCCAGTACTCAGAGGATGA...CTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CCA 90 bp GTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGAGAGCTTGTCAAACATaGTCACCAGCTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: VATPRKSLEAAPVLMGEQRACQT*SPASWP
Trigger: AGGCCATGAAGCTGGTGACCATGTTTGACAAGCTCT...CTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CCA 90 bp AAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGAGGGACTCATCCCCATTaGCTGGATGACTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KPARTRALWILQWAAERGGTHPH*LDDSVP
Trigger: AGGAACAGAGTCATCCAGCCAATGGGGATGAGTCCC...TCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp CCAAAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAAAGGGGTTTCTAAGATaGAGAAGTGGGGGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: PKPARTRALWILQWAAERKGFLR*RSGGGC
Trigger: ACACCCGCCCCCACTTCTCCATCTTAGAAACCCCTT...TCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
3UTR CAA 72 bp CCCTTGATGGAGTCCAGGGTGATGTTGAAGAGCACTTaGAGGATCTCCATGGCCCGCTCAGTCTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PLMESRVMLKST*RISMARSVSWE
Trigger: TTCCCAAGAGACTGAGCGGGCCATGGAGATCCTCAAAGTGCTCTTCAACATCACCCTGGACTCCATCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR TCA 90 bp CCAAAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGACCATATTCACTCCCATaGACTCCGTGGAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PKPARTRALWILQWAAERPYSLP*TPWSLH
Trigger: ATGGAGACTCCACGGAGTTCATGGGAGTGAATATGG...TCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp AAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGACCATATTCACTCCCATaGACTCCGTGGAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: KPARTRALWILQWAAERGPYSLP*TPWSLH
Trigger: ATGGAGACTCCACGGAGTTCATGGGAGTGAATATGG...TCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp AGACAAAAGAAAGTACTTCGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCTGTGTCCTCATCCTCTaGGTACTGGCCCTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: RQKKVLRLWNSRLSLSSSCVLIL*VLALGP
Trigger: CGGCCCGAGGGCCAGTACTCAGAGGATGAGGACACA...GCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTTCTTTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp AGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTGCCAATCCCAGATGGTCGTATGGAAAGTTCTaGCAGGTTTTCTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SAAHTPTHWLCQCANPRWSYGKF*QVFSLG
Trigger: TCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGA...CCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp TCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGGGGGAGCAGAAGAGCTaGCATCCTCAGTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SRDEKLDQRQIMNRTGVKGEQKS*HPQSGS
Trigger: GGACCCTGACTGAGGATGGCAGCTCTTCTGCTCCCC...CTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CCA 90 bp TCCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGTCACAGGGTTTATGCTaGCTTTGGCTTCCTTGTACT +
Preference number: 4 (lower is better)
Translates to: SPGCNPKEVSGSSTSPDGSQGLC*LWLPCT
Trigger: AGTACAAGGAAGCCAAAGCCAGCATAAACCCTGTGA...CCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CCA 90 bp AGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGAAAGTGGGGGCGGGTGTaGATCCAGTGGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: RPLQSRDEKLDQRQIMNRKWGRV*IQWDVA
Trigger: AGCCACATCCCACTGGATCCACACCCGCCCCCACTT...TCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CCA 90 bp CCAAAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGATGTGCCAATCCCAGATaGTGCTTGCTTTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: PKPARTRALWILQWAAERCANPR*CLLCVH
Trigger: GTGCACACAAAGCAAGCACCATCTGGGATTGGCACA...TCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp CGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCACAAGAAGACCGTTGCAGAGAACTCGGGCACTGTaGATACTACAGTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RLWNSRLSLSSSTRRPLQRTRAL*ILQWAA
Trigger: AGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCT...CTGCAACGGTCTTCTTGTGCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCAGAGGGGGCAGCACCTaGGCCTTCAGGAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: KLDQRQIMNRTGVKRRGFRGGST*AFRNFL
Trigger: CAGGAAGTTCCTGAAGGCCCAGGTGCTGCCCCCTCT...GAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527696.5
CDS-3UTR CCA 90 bp AGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAACTGCTCAGAACGGATaGCAGGGTCGGCACTCGCCC +
Preference number: 4 (lower is better)
Translates to: RDEKLDQRQIMNRTGVKRTAQNG*QGRHSP
Trigger: GGGCGAGTGCCGACCCTGCCATCCGTTCTGAGCAGT...TCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527696.5
3UTR CAA 72 bp TCGAGGCTGAGCCTGAGTTCTAGCACAAGAAGACCGTaGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SRLSLSSSTRRP*QSRDEKLDQRQ
Trigger: TTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAGAACTCAGGCTCAGCCTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
CDS-3UTR TCA 90 bp TCCAGCCCTGCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTGGTTGCACAGGCACTTaGGGGACTCCAGTACAACAT +
Preference number: 4 (lower is better)
Translates to: SSPALSEDRTGTTEHTYLGCTGT*GTPVQH
Trigger: ATGTTGTACTGGAGTCCCTCAAGTGCCTGTGCAACC...AAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGCAGGGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp GAAAGTTCTGACAGGTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTACTCCTTTCAGCTCCTaGAACAGCTGCTGGCGCACA +
Preference number: 4 (lower is better)
Translates to: ESSDRFSPWEVQHIPQHTTPFSS*NSCWRT
Trigger: TGTGCGCCAGCAGCTGTTTCAGGAGCTGAAAGGAGT...AGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp AAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCAAGCAGCACCAGTCCTaGTGGGGGAGCAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: KLDQRQIMNRTGVKRRGFKQHQS*WGSRRA
Trigger: AGCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTT...GAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR TCA 90 bp GGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGAAAGCAGCACCAGTCCTaGTGGGGGAGCAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GPEANHEQNGSQEKGFLRKQHQS*WGSRRA
Trigger: AGCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTT...TCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR TCA 90 bp GAAAGTTCTGACAGGTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTTCAGGCAGCAGCTTCTaGACACATTCCTCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: ESSDRFSPWEVQHIPQHTSGSSF*THSSWR
Trigger: GCGCCAAGAGGAATGTGTTCAGAAGCTGCTGCCTGA...AGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp TATACTCGTATGGAAAGTTCTGACAGGTTTTCTCCCTGGGAAGTGCAGCACATAGCTGGCGCACATCGGTaGGGAGTGCCGTTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: YTRMESSDRFSPWEVQHIAGAHR*GVPLAG
Trigger: TCCTGCTAACGGCACTCCGCACCGATGTGCGCCAGC...TATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGAGGGTCCGAGGAGAGCTaGTGCTCCATAGTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: EANHEQNGSQEKGFLRWRGSEES*CSIVSH
Trigger: GTGCGAGACTATGGAGCAGCAGCTCTCCTCGGACCC...TCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR GCA 90 bp AGCCTGAGTTCTAGCACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCCACACCCAAACCCCTaGCCTCCCATATGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLSSSTRRPLQSRDEKLDPHPNP*PPICSS
Trigger: AGAAGAGCATATGGGAGGGCAGGGGTTTGGGTGTGG...GTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAGAACTCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GAAAGTTCTGACAGGTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTCTGGCTCTGCCAGTGTaGCAATCCCAGATGGTGCTT +
Preference number: 4 (lower is better)
Translates to: ESSDRFSPWEVQHIPQHTLALPV*QSQMVL
Trigger: AAGCACCATCTGGGATTGGCACACTGGCAGAGCCAG...AGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp AGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTGCCAATCCCAGATGGGGAAGGAGGTTTAATTaGCAAAACCAGCGAGAACTC +
Preference number: 4 (lower is better)
Translates to: SAAHTPTHWLCQCANPRWGRRFN*QNQREL
Trigger: GAGTTCTCGCTGGTTTTGGCAATTAAACCTCCTTCC...CCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp TATACTCGTATGGAAAGTTCTGACAGGTTTTCTCCCTGGGAAGTGCAGCACATAGACACGGTGGGAGGGTaGCAAGCCCTGTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: YTRMESSDRFSPWEVQHIDTVGG*QALFQD
Trigger: GTCCTGGAACAGGGCTTGCCACCCTCCCACCGTGTC...TATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTTCACTGCGTGGCCGTaGAACTCCTCTGTGCGGTCT +
Preference number: 4 (lower is better)
Translates to: KLDQRQIMNRTGVKRRGFFTAWP*NSSVRS
Trigger: AGACCGCACAGAGGAGTTCCACGGCCACGCAGTGAA...GAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AGACAAAAGAAAGTACTTCGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCGGAGGTGGCCATCCCTaGGCCTTCAGGAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: RQKKVLRLWNSRLSLSSSGGGHP*AFRNFL
Trigger: CAGGAAGTTCCTGAAGGCCCAGGGATGGCCACCTCC...GCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTTCTTTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR CCA 90 bp TATACTCGTATGGAAAGTTCTGACAGGTTTTCTCCCTGGGAAGTGCAGCACATATCATCCTCTGAGTACTaGCCCTCGGGCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: YTRMESSDRFSPWEVQHISSSEY*PSGRPP
Trigger: AGGAGGCCGGCCCGAGGGCCAGTACTCAGAGGATGA...TATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGACGGGTGTGGATCCAGTaGGATGTGGCTTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: EANHEQNGSQEKGFLRWRRVWIQ*DVASPG
Trigger: ACCTGGGGAAGCCACATCCCACTGGATCCACACCCG...TCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CCA 90 bp GAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGAAAGTGGGGGCGGGTGTaGATCCAGTGGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: EANHEQNGSQEKGFLRWRKWGRV*IQWDVA
Trigger: AGCCACATCCCACTGGATCCACACCCGCCCCCACTT...TCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CCA 90 bp GGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGAAGTGGGGGCGGGTGTaGATCCAGTGGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: GQEQQSIHTLEGCVLIYSKWGRV*IQWDVA
Trigger: AGCCACATCCCACTGGATCCACACCCGCCCCCACTT...CGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AGCCTGAGTTCTAGCACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACTCTAAGATGGAGAAGTaGGGGCGGGTGTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: SLSSSTRRPLQSRDEKLDSKMEK*GRVWIQ
Trigger: CTGGATCCACACCCGCCCCCACTTCTCCATCTTAGA...GTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAGAACTCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp ACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGACTCCTTTCAGCTCCTaGAACAGCTGCTGGCGCACA +
Preference number: 4 (lower is better)
Translates to: TRRPLQSRDEKLDQRQIMTPFSS*NSCWRT
Trigger: TGTGCGCCAGCAGCTGTTTCAGGAGCTGAAAGGAGT...CATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp TCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGGAACATCCAGACACTTaGGGGGCAAGTTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SRDEKLDQRQIMNRTGVKEHPDT*GASSPG
Trigger: TCCTGGGGAACTTGCCCCTCAAGTGTCTGGATGTTC...CTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp TCCAGCCCTGCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTGCTTCTCTAGGAAGATaGGGAGGGCACGAATCACAT +
Preference number: 4 (lower is better)
Translates to: SSPALSEDRTGTTEHTYLASLGR*GGHESH
Trigger: ATGTGATTCGTGCCCTCCTCATCTTCCTAGAGAAGC...AAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGCAGGGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp AGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTGCCAATCCCAGATGGTGGAAGGGTGTGTTCTaGTATACTCGTATGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SAAHTPTHWLCQCANPRWWKGVF*YTRMES
Trigger: ACTTTCCATACGAGTATATCAGAACACACCCTTCCA...CCATCTGGGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp GGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATCCCCATTGGCTGGATaGCTCTGTTCCTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GPEANHEQNGSQEKGFLRSPLAG*LCSCWG
Trigger: TCCCCAACAGGAACAGAGTCATCCAGCCAATGGGGA...TCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524854.5
CDS-3UTR GCA 90 bp TCCAGCCCTGCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTCGGTCACAGGGTTTATaGTGGCTTTGGCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SSPALSEDRTGTTEHTYLRSQGL*WLWLPC
Trigger: ACAAGGAAGCCAAAGCCAGCATAAACCCTGTGACCG...AAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGCAGGGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp AGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGATCCGAGGAGAGCTGCTaGTCCATAGTCTCGCACATG +
Preference number: 4 (lower is better)
Translates to: RPLQSRDEKLDQRQIMNRSEESC*SIVSHM
Trigger: CATGTGCGAGACTATGGAGCAGCAGCTCTCCTCGGA...TCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR GCA 90 bp GGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGGGGGAGCAGAAGAGCTaGCATCCTCAGTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GTTEHTYLGRVCSDILVWGEQKS*HPQSGS
Trigger: GGACCCTGACTGAGGATGGCAGCTCTTCTGCTCCCC...CCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp AGGGTGTGTTCTGATATACTCGTATGGAAAGTTCTGACAGGTTTTCTCCCTGGGCCCTGCCCTCCCATATaGTCTTCTGTGTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RVCSDILVWKVLTGFLPGPCPPI*SSVCPG
Trigger: ACCTGGGCACACAGAAGAGCATATGGGAGGGCAGGG...CCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATATCAGAACACACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTGGAAGGAGGTTTAATTaGCAAAACCAGCGAGAACTC +
Preference number: 4 (lower is better)
Translates to: VFSLGSAAHTPTHWLCQCGRRFN*QNQREL
Trigger: GAGTTCTCGCTGGTTTTGGCAATTAAACCTCCTTCC...ACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGATTCACTGCGTGGCCGTaGAACTCCTCTGTGCGGTCT +
Preference number: 4 (lower is better)
Translates to: EANHEQNGSQEKGFLRWRFTAWP*NSSVRS
Trigger: AGACCGCACAGAGGAGTTCCACGGCCACGCAGTGAA...TCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp TCTTGGCGCAGACAAAAGAAAGTACTTCGTCTGTGGAATTCGAGGCTGAGCCTGCTCATCCCCATTGGCTaGATGACTCTGTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SWRRQKKVLRLWNSRLSLLIPIG*MTLFLE
Trigger: CTCCAGGAACAGAGTCATCCAGCCAATGGGGATGAG...CAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTTCTTTTGTCTGCGCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AGTTCTAGCACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGGACAGGTTTTCTCCCTaGGAAGTGCAGCACATACCC +
Preference number: 4 (lower is better)
Translates to: SSSTRRPLQSRDEKLDQRDRFSP*EVQHIP
Trigger: GGGTATGTGCTGCACTTCCCAGGGAGAAAACCTGTC...CCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AGTTCTAGCACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCTGTGGATACTACAGTaGGCAGCTGAACGAGGACCA +
Preference number: 4 (lower is better)
Translates to: SSSTRRPLQSRDEKLDQRLWILQ*AAERGP
Trigger: TGGTCCTCGTTCAGCTGCCCACTGTAGTATCCACAG...CCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp GCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGAAGTCAGCCCTGCGCTCAGTaGAGACAGGACAGGAACAAC +
Preference number: 4 (lower is better)
Translates to: ANHEQNGSQEKGFLRWRSQPCAQ*RQDRNN
Trigger: GTTGTTCCTGTCCTGTCTTCACTGAGCGCAGGGCTG...ACTTCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp ATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTTGTTGTAAGTGTAGTCGTCTCCACGGCTTCTaGAACCGCCCGGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: INLNLWSHEGHFPCCKCSRLHGF*NRPGLH
Trigger: ATGGAGCCCCGGGCGGTTGCAGAAGCCGTGGAGACG...ACTACACTTACAACAAGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR GCA 90 bp GAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGATACAACATCCATGTCTaGGGACTCTGGGACGGACCC +
Preference number: 4 (lower is better)
Translates to: EANHEQNGSQEKGFLRWRYNIHV*GLWDGP
Trigger: GGGTCCGTCCCAGAGTCCGCAGACATGGATGTTGTA...TCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGGGTGCTTGCTTTGTGTaGACCCACACCCAAACCCCT +
Preference number: 4 (lower is better)
Translates to: GQEQQSIHTLEGCVLIYSGACFV*THTQTP
Trigger: AGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACC...CGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp TGTGTGGTATGTGGTATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTAGCCAGATGACACGGTaGGAGGGTGGCAAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CVVCGINLNLWSHEGHFPSQMTR*EGGKPC
Trigger: ACAGGGCTTGCCACCCTCCCACCGTGTCATCTGGCT...AGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTATACCACATACCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp TGTGTGGTATGTGGTATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTGCCCGCTCAGTCTCTTaGGAAGGAAGGAGCGTGGGT +
Preference number: 4 (lower is better)
Translates to: CVVCGINLNLWSHEGHFPARSVS*EGRSVG
Trigger: ACCCACGCTCCTTCCTTCCCAAGAGACTGAGCGGGC...AGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTATACCACATACCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp TCCAGCCCTGCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTAGAGCTTGTCAAACATaGTCACCAGCTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SSPALSEDRTGTTEHTYLRACQT*SPASWP
Trigger: AGGCCATGAAGCTGGTGACCATGTTTGACAAGCTCT...AAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGCAGGGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp TCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGGGGACTCATCCCCATTaGCTGGATGACTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: SRDEKLDQRQIMNRTGVKGTHPH*LDDSVP
Trigger: AGGAACAGAGTCATCCAGCCAATGGGGATGAGTCCC...CTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CCA 90 bp AGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGACTGTGGATACTACAGTaGGCAGCTGAACGAGGACCA +
Preference number: 4 (lower is better)
Translates to: RPLQSRDEKLDQRQIMNRLWILQ*AAERGP
Trigger: TGGTCCTCGTTCAGCTGCCCACTGTAGTATCCACAG...TCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp GGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGGGGCATCATCAAACGTaGAGCTCTGGGAGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GTTEHTYLGRVCSDILVWGHHQT*SSGSAP
Trigger: AGGAGCACTCCCAGAGCTTCACGTTTGATGATGCCC...CCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR TCA 90 bp GAAGACAGGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATGGTTGCACAGGCACTTaGGGGACTCCAGTACAACAT +
Preference number: 4 (lower is better)
Translates to: EDRTGTTEHTYLGRVCSDGCTGT*GTPVQH
Trigger: ATGTTGTACTGGAGTCCCTCAAGTGCCTGTGCAACC...ATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp TATACTCGTATGGAAAGTTCTGACAGGTTTTCTCCCTGGGAAGTGCAGCACATATCAGGCAGCAGCTTCTaGACACATTCCTCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: YTRMESSDRFSPWEVQHISGSSF*THSSWR
Trigger: GCGCCAAGAGGAATGTGTTCAGAAGCTGCTGCCTGA...TATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGTACAACATCCATGTCTaGGGACTCTGGGACGGACCC +
Preference number: 4 (lower is better)
Translates to: GTTEHTYLGRVCSDILVWYNIHV*GLWDGP
Trigger: GGGTCCGTCCCAGAGTCCGCAGACATGGATGTTGTA...CCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp ATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTTGTTGTAAGTGTAGTTGCCCAGGTAGGCCCTaGCCTCAGGCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: INLNLWSHEGHFPCCKCSCPGRP*PQAAAS
Trigger: AGAAGCTGCTGCCTGAGGGCAGGGCCTACCTGGGCA...ACTACACTTACAACAAGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGCCACACCCAAACCCCTaGCCTCCCATATGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GTTEHTYLGRVCSDILVWPHPNP*PPICSS
Trigger: AGAAGAGCATATGGGAGGGCAGGGGTTTGGGTGTGG...CCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp GGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGGGTGCTTGCTTTGTGTaGACCCACACCCAAACCCCT +
Preference number: 4 (lower is better)
Translates to: GTTEHTYLGRVCSDILVWGACFV*THTQTP
Trigger: AGGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACC...CCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGAAGTTGGTCACCAGCTTCATaGCCTCGTGCTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ANHEQNGSQEKGFLRWRSWSPAS*PRAPSA
Trigger: AGCAGAAGGAGCACGAGGCCATGAAGCTGGTGACCA...ACTTCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CCA 90 bp AGGGTGTGTTCTGATATACTCGTATGGAAAGTTCTGACAGGTTTTCTCCCTGGGCATACCCCAACACACTaGCTCTGCCAGTGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: RVCSDILVWKVLTGFLPGHTPTH*LCQCAN
Trigger: ATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATG...CCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATATCAGAACACACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp GGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGGCTTCTCTAGGAAGATaGGGAGGGCACGAATCACAT +
Preference number: 4 (lower is better)
Translates to: GQEQQSIHTLEGCVLIYSASLGR*GGHESH
Trigger: ATGTGATTCGTGCCCTCCTCATCTTCCTAGAGAAGC...CGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR GCA 90 bp ACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAGCCTGTGTGTCTTGTaGAAACGCTTCTCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: TRRPLQSRDEKLDQRQIMSLCVL*KRFSRK
Trigger: CTTCCTAGAGAAGCGTTTGCACAAGACACACAGGCT...CATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GAAGACAGGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATTTCCGGTCCTCCTGTTaGGCATCATCAAACGTGAAG +
Preference number: 4 (lower is better)
Translates to: EDRTGTTEHTYLGRVCSDFRSSC*ASSNVK
Trigger: CTTCACGTTTGATGATGCCCAACAGGAGGACCGGAA...ATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AGACAAAAGAAAGTACTTCGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCTTCCGGTCCTCCTGTTaGGCATCATCAAACGTGAAG +
Preference number: 4 (lower is better)
Translates to: RQKKVLRLWNSRLSLSSSFRSSC*ASSNVK
Trigger: CTTCACGTTTGATGATGCCCAACAGGAGGACCGGAA...GCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTTCTTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp TGTGTGGTATGTGGTATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTAAGAACTGGACATCGTaGGGGAAGCTCCTCTCACGG +
Preference number: 4 (lower is better)
Translates to: CVVCGINLNLWSHEGHFPKNWTS*GKLLSR
Trigger: CCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTT...AGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTATACCACATACCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp TGTGTGGTATGTGGTATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTTGGTCACCAGCTTCATaGCCTCGTGCTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CVVCGINLNLWSHEGHFPWSPAS*PRAPSA
Trigger: AGCAGAAGGAGCACGAGGCCATGAAGCTGGTGACCA...AGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTATACCACATACCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGAAGAGCTTGTCAAACATaGTCACCAGCTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RPLQSRDEKLDQRQIMNRRACQT*SPASWP
Trigger: AGGCCATGAAGCTGGTGACCATGTTTGACAAGCTCT...TCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CCA 90 bp GCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGAAGTGACAGGTTTTCTCCCTaGGAAGTGCAGCACATACCC +
Preference number: 4 (lower is better)
Translates to: ANHEQNGSQEKGFLRWRSDRFSP*EVQHIP
Trigger: GGGTATGTGCTGCACTTCCCAGGGAGAAAACCTGTC...ACTTCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GGGTTTCTAAGATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTTCTGATATACTCGTATaGAAAGTTCTGACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: GFLRWRSGGGCGSSGMWLSDILV*KVLTGF
Trigger: AAAACCTGTCAGAACTTTCCATACGAGTATATCAGA...AAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCATCTTAGAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGAGAACTCGGGCACTGTaGATACTACAGTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GTTEHTYLGRVCSDILVWRTRAL*ILQWAA
Trigger: AGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCT...CCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp CCAAAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAATAAATCTCAATCTATaGTCACACGAGGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: PKPARTRALWILQWAAERINLNL*SHEGHF
Trigger: AAAATGCCCCTCGTGTGACCATAGATTGAGATTTAT...TCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp GGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTCGTATGGAAAGTTCTaGCAGGTTTTCTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GQEQQSIHTLEGCVLIYSSYGKF*QVFSLG
Trigger: TCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGA...CGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AGACAAAAGAAAGTACTTCGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCAAAGTACTTCGTCTGTaGAATTCGAGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RQKKVLRLWNSRLSLSSSKVLRL*NSRLSL
Trigger: CAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTT...GCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTTCTTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp GGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGTGTGCCAATCCCAGATaGTGCTTGCTTTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: GTTEHTYLGRVCSDILVWCANPR*CLLCVH
Trigger: GTGCACACAAAGCAAGCACCATCTGGGATTGGCACA...CCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp ATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTTGTTGTAAGTGTAGTGAACATCCAGACACTTaGGGGGCAAGTTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: INLNLWSHEGHFPCCKCSEHPDT*GASSPG
Trigger: TCCTGGGGAACTTGCCCCTCAAGTGTCTGGATGTTC...ACTACACTTACAACAAGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR TCA 90 bp GCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGAAGTACCAGAGGCAAATCATaGACAGAACGGGAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: ANHEQNGSQEKGFLRWRSTRGKS*TERESR
Trigger: TCTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGT...ACTTCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CCA 90 bp GCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGAAGTTCAAACGTGAAGCTCTaGGAGTGCTCCTGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: ANHEQNGSQEKGFLRWRSSNVKL*ECSWLY
Trigger: ATACAACCAGGAGCACTCCCAGAGCTTCACGTTTGA...ACTTCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR CCA 90 bp AGACAAAAGAAAGTACTTCGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCTCACAGGGTTTATGCTaGCTTTGGCTTCCTTGTACT +
Preference number: 4 (lower is better)
Translates to: RQKKVLRLWNSRLSLSSSSQGLC*LWLPCT
Trigger: AGTACAAGGAAGCCAAAGCCAGCATAAACCCTGTGA...GCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTTCTTTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp ATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTTGTTGTAAGTGTAGTCGCAAGTCAAAGAACTaGACATCGTGGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: INLNLWSHEGHFPCCKCSRKSKN*TSWGKL
Trigger: GAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGCG...ACTACACTTACAACAAGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp ATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTTGTTGTAAGTGTAGTGGGACTCATCCCCATTaGCTGGATGACTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: INLNLWSHEGHFPCCKCSGTHPH*LDDSVP
Trigger: AGGAACAGAGTCATCCAGCCAATGGGGATGAGTCCC...ACTACACTTACAACAAGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
3UTR CAA 72 bp GTGAAGACAGGACAGGAACAACAGAGCATACATACCTaGGAAGGGTGTGTTCTGATATACTCGTATGGAAAG +
Preference number: 4 (lower is better)
Translates to: VKTGQEQQSIHT*EGCVLIYSYGK
Trigger: CTTTCCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000526104.5
ENST00000527696.5
CDS-3UTR CCA 90 bp TGTGTGGTATGTGGTATAAATCTCAATCTATGGTCACACGAGGGGCATTTTCCTTCACAGGGTTTATGCTaGCTTTGGCTTCCTTGTACT +
Preference number: 4 (lower is better)
Translates to: CVVCGINLNLWSHEGHFPSQGLC*LWLPCT
Trigger: AGTACAAGGAAGCCAAAGCCAGCATAAACCCTGTGA...AGGAAAATGCCCCTCGTGTGACCATAGATTGAGATTTATACCACATACCACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGAATAAATCTCAATCTATaGTCACACGAGGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: RPLQSRDEKLDQRQIMNRINLNL*SHEGHF
Trigger: AAAATGCCCCTCGTGTGACCATAGATTGAGATTTAT...TCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGAGCTATGTGTGGTATGTaGTATAAATCTCAATCTATG +
Preference number: 4 (lower is better)
Translates to: RPLQSRDEKLDQRQIMNRAMCGM*YKSQSM
Trigger: CATAGATTGAGATTTATACCACATACCACACATAGC...TCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AGACAAAAGAAAGTACTTCGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCTCTGATATACTCGTATaGAAAGTTCTGACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RQKKVLRLWNSRLSLSSSSDILV*KVLTGF
Trigger: AAAACCTGTCAGAACTTTCCATACGAGTATATCAGA...GCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTTCTTTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CCA 90 bp AGACAAAAGAAAGTACTTCGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCGCTATGTGTGGTATGTaGTATAAATCTCAATCTATG +
Preference number: 4 (lower is better)
Translates to: RQKKVLRLWNSRLSLSSSAMCGM*YKSQSM
Trigger: CATAGATTGAGATTTATACCACATACCACACATAGC...GCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTTCTTTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS GCA 90 bp CAGAGCTTCCATAATCACATCCTCCTCACCCGTCTCCACGGCTTCTaGAACCGCCCGGGGCTCCATGGCGCGCCGGGGAAGGCGGGACGG +
Preference number: 5 (lower is better)
Translates to: QSFHNHILLTRLHGF*NRPGLHGAPGKAGR
Trigger: CCGTCCCGCCTTCCCCGGCGCGCCATGGAGCCCCGGGCGGTTGCAGAAGCCGTGGAGACGGGTGAGGAGGATGTGATTATGGAAGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325207.9
ENST00000526104.6
ENST00000526982.1
ENST00000528357.5
CDS CCA 90 bp TCTCTGTGGGCAGGGAGAAGAGCGGCTCCACCAGGCCCTTCTTCCTaGGGCCACCCGTCCCTGCCCCTTTACCCCTTGGGCCAGCACCCA +
Preference number: 5 (lower is better)
Translates to: SLWAGRRAAPPGPSS*GHPSLPLYPLGQHP
Trigger: TGGGTGCTGGCCCAAGGGGTAAAGGGGCAGGGACGGGTGGCCCCAGGAAGAAGGGCCTGGTGGAGCCGCTCTTCTCCCTGCCCACAGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527696.5
ENST00000532373.1
CDS GCA 90 bp TTCAGTGACGCACAGGAAGCGCGATCCACTCGCTCTTCTAACAAGTaGCCGGGAGCAAAGGCGTCTACGGCCCCCAGTCCCCGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: FSDAQEARSTRSSNK*PGAKASTAPSPRAA
Trigger: GGCGGCGCGGGGACTGGGGGCCGTAGACGCCTTTGCTCCCGGGCACTTGTTAGAAGAGCGAGTGGATCGCGCTTCCTGTGCGTCACTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS GCA 90 bp AGAGGGGGCAGCACCTGGGCCTTCAGGAACTTCCTGGCTGGGCGGTaGATCCGGGCACATTCAGTCAGCACGCTCAGCACGGGAGCTACA +
Preference number: 5 (lower is better)
Translates to: RGGSTWAFRNFLAGR*IRAHSVSTLSTGAT
Trigger: TGTAGCTCCCGTGCTGAGCGTGCTGACTGAATGTGCCCGGATGCACCGCCCAGCCAGGAAGTTCCTGAAGGCCCAGGTGCTGCCCCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526104.6
ENST00000527696.5
ENST00000527728.1
CDS GCA 90 bp GCTGATGCGGGCGGCCTATTGGCCTCTAACTCAGGCAGCAGCCACTaGTCAGAACGGATGGCAGGGTCGGCACTCGCCCCCATCCCTACA +
Preference number: 5 (lower is better)
Translates to: ADAGGLLASNSGSSH*SERMAGSALAPIPT
Trigger: TGTAGGGATGGGGGCGAGTGCCGACCCTGCCATCCGTTCTGAGCAGTGGCTGCTGCCTGAGTTAGAGGCCAATAGGCCGCCCGCATCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527468.1
ENST00000527696.5
CDS CCA 90 bp GCCTATTGGCCTCTAACTCAGGCAGCAGCCACTGCTCAGAACGGATaGCAGGGTCGGCACTCGCCCCCATCCCTACACGCCTGCCACCCA +
Preference number: 5 (lower is better)
Translates to: AYWPLTQAAATAQNG*QGRHSPPSLHACHP
Trigger: TGGGTGGCAGGCGTGTAGGGATGGGGGCGAGTGCCGACCCTGCCATCCGTTCTGAGCAGTGGCTGCTGCCTGAGTTAGAGGCCAATAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527468.1
ENST00000527696.5
CDS-3UTR CAA 90 bp ACGGGTCCAGGCAGTTGCGGTCCCGGGACAGGATTCGGACACTCTGCAGCCAGAAACGGGTCCAGGCAGTaGCGGTCCCGGGACAGGATT +
Preference number: 5 (lower is better)
Translates to: TGPGSCGPGTGFGHSAARNGSRQ*RSRDRI
Trigger: AATCCTGTCCCGGGACCGCAACTGCCTGGACCCGTT...TCTGGCTGCAGAGTGTCCGAATCCTGTCCCGGGACCGCAACTGCCTGGACCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS GCA 90 bp GTGGACAGTGTGGAAGCACTGACCACATCTGTGCAGGAGAACCAGTaGCAGAGCCACTGGGGGAGCCTGCACAGCCATCCCCAGCCTACC +
Preference number: 5 (lower is better)
Translates to: VDSVEALTTSVQENQ*QSHWGSLHSHPQPT
Trigger: GGTAGGCTGGGGATGGCTGTGCAGGCTCCCCCAGTGGCTCTGGCACTGGTTCTCCTGCACAGATGTGGTCAGTGCTTCCACACTGTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CCA 90 bp ACCAGCTCCTCAGCCTTATACCTGGGCCTTCAGGAACTTCCTGGCTaGGCGGTGCATCCGGGCACATTCAGTCAGCACGCTCAGCACGGG +
Preference number: 5 (lower is better)
Translates to: TSSSALYLGLQELPG*AVHPGTFSQHAQHG
Trigger: CCCGTGCTGAGCGTGCTGACTGAATGTGCCCGGATGCACCGCCCAGCCAGGAAGTTCCTGAAGGCCCAGGTATAAGGCTGAGGAGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527039.1
ENST00000530149.1
CDS CCA 90 bp CCGAAACCACATCCCCCAGGAGCACCAGCTCCTCAGCCTTATACCTaGGCCTTCAGGAACTTCCTGGCTGGGCGGTGCATCCGGGCACAT +
Preference number: 5 (lower is better)
Translates to: PKPHPPGAPAPQPYT*AFRNFLAGRCIRAH
Trigger: ATGTGCCCGGATGCACCGCCCAGCCAGGAAGTTCCTGAAGGCCCAGGTATAAGGCTGAGGAGCTGGTGCTCCTGGGGGATGTGGTTTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527039.1
ENST00000530149.1
CDS CCA 90 bp TGTCCCACCCTACAGGGGTCCACATGGGTGTGGAAGCAGGGACTATaGGGCTGTGAGTGGAGACCCGAGGGTGTGTTGGGGGTACACACC +
Preference number: 5 (lower is better)
Translates to: CPTLQGSTWVWKQGL*GCEWRPEGVLGVHT
Trigger: GGTGTGTACCCCCAACACACCCTCGGGTCTCCACTCACAGCCCCATAGTCCCTGCTTCCACACCCATGTGGACCCCTGTAGGGTGGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS-3UTR CAA 90 bp GGACAGGATTCGGACACTCTGCAGCCAGATGACACGGTGGGAGGGTGGCAAGCCCTGCTGAGCACGAGGTaGCACAGGCACTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: GQDSDTLQPDDTVGGWQALLSTR*HRHLRD
Trigger: GTCCCTCAAGTGCCTGTGCAACCTCGTGCTCAGCAG...GGCTTGCCACCCTCCCACCGTGTCATCTGGCTGCAGAGTGTCCGAATCCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS TCA 90 bp GCGACTGCTGGGCTGCAACGGGCTGTGAGGAAGTGCTGTTTTTGCTaGCACCGGACGGTGGGAAGTGAGCCGGGAAAAGACTGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: ATAGLQRAVRKCCFC*HRTVGSEPGKDWRS
Trigger: GCTCCTCCAGTCTTTTCCCGGCTCACTTCCCACCGTCCGGTGTCAGCAAAAACAGCACTTCCTCACAGCCCGTTGCAGCCCAGCAGTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS TCA 90 bp GGGTGGGGCCTGGGCTCTCAGGTGGTTCTGGTTCAGAGCCGGGGTTaGGGACGACCATCTAGACATGTGGGCACACTTCCCTCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: GWGLGSQVVLVQSRG*GRPSRHVGTLPSQK
Trigger: TTTCTGGGAGGGAAGTGTGCCCACATGTCTAGATGGTCGTCCTCAACCCCGGCTCTGAACCAGAACCACCTGAGAGCCCAGGCCCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS TCA 90 bp GAGGTGGCCATCCCTAAGCTTGGGCTTAGAGCAGCCAAGGGTCTGTaGTCAGGGCCGAAACCACATCCCCCAGGAGCACCAGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: EVAIPKLGLRAAKGL*SGPKPHPPGAPAPQ
Trigger: CTGAGGAGCTGGTGCTCCTGGGGGATGTGGTTTCGGCCCTGATCACAGACCCTTGGCTGCTCTAAGCCCAAGCTTAGGGATGGCCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS GCA 90 bp AAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGAAGAGCTaGCATCCTCAGTCAGGGTCCGAGTCAGGGTCCGAGGAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: KSLEAAPVLMGEQKS*HPQSGSESGSEESC
Trigger: GCAGCTCTCCTCGGACCCTGACTCGGACCCTGACTGAGGATGGCAGCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.6
ENST00000526557.1
ENST00000527696.5
ENST00000529275.1
ENST00000531541.1
CDS GCA 90 bp TCTTGGGCCAGAAGTTCCAACAGGAAACGATCTCAGCCCCCACCGTaGCCTGCCACACACACAGTGACGCCCCTCGAGCTCCACAGAACC +
Preference number: 5 (lower is better)
Translates to: SWARSSNRKRSQPPP*PATHTVTPLELHRT
Trigger: GGTTCTGTGGAGCTCGAGGGGCGTCACTGTGTGTGTGGCAGGGCACGGTGGGGGCTGAGATCGTTTCCTGTTGGAACTTCTGGCCCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS GCA 90 bp CCTCAGCCTTATACCTGGGCCTTCAGGAACTTCCTGGCTGGGCGGTaGATCCGGGCACATTCAGTCAGCACGCTCAGCACGGGAGCTACA +
Preference number: 5 (lower is better)
Translates to: PQPYTWAFRNFLAGR*IRAHSVSTLSTGAT
Trigger: TGTAGCTCCCGTGCTGAGCGTGCTGACTGAATGTGCCCGGATGCACCGCCCAGCCAGGAAGTTCCTGAAGGCCCAGGTATAAGGCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527039.1
ENST00000530149.1
CDS-3UTR CAA 90 bp TTTCTAAGATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCGGCCCGCTCAGTCTCTaGGGAAGGAAGGAGCGTGGG +
Preference number: 5 (lower is better)
Translates to: FLRWRSGGGCGSSGMWLPGPLSL*GRKERG
Trigger: CCCACGCTCCTTCCTTCCCAAGAGACTGAGCGGGCC...GGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCATCTTAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS TCA 90 bp CCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTaGTGGGGGAGCAGAAGAGCTGCCATCCTCAGTCAGGGTCCGAGT +
Preference number: 5 (lower is better)
Translates to: PRLQPQGSLWKQHQS*WGSRRAAILSQGPS
Trigger: ACTCGGACCCTGACTGAGGATGGCAGCTCTTCTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.6
ENST00000526557.1
ENST00000527696.5
ENST00000529275.1
ENST00000531541.1
CDS GCA 90 bp AGCTGCCATCCTCAGTCAGGGTCCGAGTCAGGGTCCGAGGAGAGCTaGTGCTCCATAGTCTCGCACATGGCATCCTGCAGGGACGTAAGA +
Preference number: 5 (lower is better)
Translates to: SCHPQSGSESGSEES*CSIVSHMASCRDVR
Trigger: TCTTACGTCCCTGCAGGATGCCATGTGCGAGACTATGGAGCAGCAGCTCTCCTCGGACCCTGACTCGGACCCTGACTGAGGATGGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.6
ENST00000526557.1
ENST00000527696.5
ENST00000531541.1
CDS GCA 90 bp CCACATCTGTGCAGGAGAACCAGTGCCAGAGCCACTGGGGGAGCCTaGACAGCCATCCCCAGCCTACCTTGTGCAAACGCTTCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: PHLCRRTSARATGGA*TAIPSLPCANASLG
Trigger: TCCTAGAGAAGCGTTTGCACAAGGTAGGCTGGGGATGGCTGTGCAGGCTCCCCCAGTGGCTCTGGCACTGGTTCTCCTGCACAGATGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CCA 90 bp GCTCTTGCCCATTTGTCATCCTGTCCCACCCTACAGGGGTCCACATaGGTGTGGAAGCAGGGACTATGGGGCTGTGAGTGGAGACCCGAG +
Preference number: 5 (lower is better)
Translates to: ALAHLSSCPTLQGST*VWKQGLWGCEWRPE
Trigger: CTCGGGTCTCCACTCACAGCCCCATAGTCCCTGCTTCCACACCCATGTGGACCCCTGTAGGGTGGGACAGGATGACAAATGGGCAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS-3UTR CAA 90 bp CCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGTGGGAGTGCTCCTGGTaGTATGACCGCAGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: PQVATPRKSLEAAPVLMGWECSW*YDRRAS
Trigger: GGAAGCTCTGCGGTCATACAACCAGGAGCACTCCCA...CCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR CAA 90 bp CAGTCTCTTCCGGTCCTCCTGTTGGGCATCATCAAACGTGAAGCTCTGGGAGTGGGCCCGCTCAGTCTCTaGGGAAGGAAGGAGCGTGGG +
Preference number: 5 (lower is better)
Translates to: QSLPVLLLGIIKREALGVGPLSL*GRKERG
Trigger: CCCACGCTCCTTCCTTCCCAAGAGACTGAGCGGGCC...CACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR CAA 90 bp GTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGTCGTCCACCTCCCCCTaGATGGAGTCCAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: VATPRKSLEAAPVLMGEQSSTSP*MESRVM
Trigger: CATCACCCTGGACTCCATCAAGGGGGAGGTGGACGA...CTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp GGAGCCGCAAGTCAAAGAACTGGACATCGTGGGGGAAGCTCCTCTCACGGTACAGATGCGGGCGGCCTATaGGCCTCTAACTCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: GAASQRTGHRGGSSSHGTDAGGL*ASNSGS
Trigger: GCTGCCTGAGTTAGAGGCCAATAGGCCGCCCGCATC...TGTACCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGCGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS TCA 90 bp AGAACTCGGCAGCCACCCTCTTCACATCTGTGTCCAGGTGTGTCATaGGGCGGACAAGCTTGTTCCGCAGCATCTCCCCAACCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: RTRQPPSSHLCPGVS*GGQACSAASPQPQA
Trigger: GGCCTGAGGTTGGGGAGATGCTGCGGAACAAGCTTGTCCGCCTCATGACACACCTGGACACAGATGTGAAGAGGGTGGCTGCCGAGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325207.9
ENST00000526104.6
ENST00000527696.5
ENST00000530149.1
ENST00000532241.1
CDS TCA 90 bp AGAAGGGTTCCTGTGAGGAGCCCCACTCATCCCACTGCTGCCTGCTaGGGCTCCACTGTCTGTTGCACTCCAGGACTGTGTGGCAATGAC +
Preference number: 5 (lower is better)
Translates to: RRVPVRSPTHPTAAC*GSTVCCTPGLCGND
Trigger: GTCATTGCCACACAGTCCTGGAGTGCAACAGACAGTGGAGCCTCAGCAGGCAGCAGTGGGATGAGTGGGGCTCCTCACAGGAACCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS TCA 90 bp CACAGACAACCCCCTAGCTGTGTGTCCAGTGCCAGCTCCCTATCCTaGCTGGCTCGCAGGCACCTTGTGTGTCCCTTGCTTAGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: HRQPPSCVSSASSLS*LARRHLVCPLLRQV
Trigger: TACCTGCCTAAGCAAGGGACACACAAGGTGCCTGCGAGCCAGTCAGGATAGGGAGCTGGCACTGGACACACAGCTAGGGGGTTGTCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS GCA 90 bp CAGAGCCACTGGGGGAGCCTGCACAGCCATCCCCAGCCTACCTTGTaGAAACGCTTCTCTAGGAAGATGAGGAGGGCACGAATCACATCC +
Preference number: 5 (lower is better)
Translates to: QSHWGSLHSHPQPTL*KRFSRKMRRARITS
Trigger: GGATGTGATTCGTGCCCTCCTCATCTTCCTAGAGAAGCGTTTGCACAAGGTAGGCTGGGGATGGCTGTGCAGGCTCCCCCAGTGGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS GCA 90 bp ACTTCGTGGACAGAGCAGGGAGTTCTTGACCCTCCTAGCATAATGTaGCTGGACCCCAGCACCAGCAGTGGCAGCGACGGGCACAGACAA +
Preference number: 5 (lower is better)
Translates to: TSWTEQGVLDPPSIM*LDPSTSSGSDGHRQ
Trigger: TTGTCTGTGCCCGTCGCTGCCACTGCTGGTGCTGGGGTCCAGGCACATTATGCTAGGAGGGTCAAGAACTCCCTGCTCTGTCCACGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS-3UTR CAA 90 bp AACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGACCTGCTGAGCACGAGGTaGCACAGGCACTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: NQRELGHCGYYSGQLNEDLLSTR*HRHLRD
Trigger: GTCCCTCAAGTGCCTGTGCAACCTCGTGCTCAGCAG...GTCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp AGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCCAGGTTGCAACCATGTTGAAGAGCACTTaGAGGATCTCCATGGCCCGC +
Preference number: 5 (lower is better)
Translates to: RSGGGCGSSGMWLPQVATMLKST*RISMAR
Trigger: GCGGGCCATGGAGATCCTCAAAGTGCTCTTCAACAT...GGTTGCAACCTGGGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp GCAAGTCAAAGAACTGGACATCGTGGGGGAAGCTCCTCTCACGGTACAGCCCCATCGTCCACCTCCCCCTaGATGGAGTCCAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: ASQRTGHRGGSSSHGTAPSSTSP*MESRVM
Trigger: CATCACCCTGGACTCCATCAAGGGGGAGGTGGACGA...TGGGGCTGTACCGTGAGAGGAGCTTCCCCCACGATGTCCAGTTCTTTGACTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR CAA 90 bp CAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGTGTGGCTTCCCCAGGTaGCAACCCCAAGGAAGTCTC +
Preference number: 5 (lower is better)
Translates to: QVATPRKSLEAAPVLMGECGFPR*QPQGSL
Trigger: GAGACTTCCTTGGGGTTGCAACCTGGGGAAGCCACA...CTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CAA 90 bp GTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGCAGTGTGGCTTCCCCAGGTaGCAACCCCAAGGAAGTCTC +
Preference number: 5 (lower is better)
Translates to: VATPRKSLEAAPVLMGEQCGFPR*QPQGSL
Trigger: GAGACTTCCTTGGGGTTGCAACCTGGGGAAGCCACA...CTGCTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS GCA 90 bp TGCCATCCTCAGTCAGGGTCCGAGTCAGGGTCCGAGGAGAGCTGCTaGTCCATAGTCTCGCACATGGCATCCTGGAGAGCTTGTCAAACA +
Preference number: 5 (lower is better)
Translates to: CHPQSGSESGSEESC*SIVSHMASWRACQT
Trigger: TGTTTGACAAGCTCTCCAGGATGCCATGTGCGAGACTATGGAGCAGCAGCTCTCCTCGGACCCTGACTCGGACCCTGACTGAGGATGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529275.1
CDS GCA 90 bp GACCAAAGAAAGAAGGGTTCCTGTGAGGAGCCCCACTCATCCCACTaGTGCCTGCTGAGGCTCCACTGTCTGTTGCACTCCAGGACTGTG +
Preference number: 5 (lower is better)
Translates to: DQRKKGSCEEPHSSH*CLLRLHCLLHSRTV
Trigger: CACAGTCCTGGAGTGCAACAGACAGTGGAGCCTCAGCAGGCAGCAGTGGGATGAGTGGGGCTCCTCACAGGAACCCTTCTTTCTTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CCA 90 bp AGAGGTCAGTGTGCAAGCCTGGCTGAGGTGGGGTGGGCTGGGACCTaGGTCTCCATAACTCACCACTCTCAGAGCACAGGACAAACAAGA +
Preference number: 5 (lower is better)
Translates to: RGQCASLAEVGWAGT*VSITHHSQSTGQTR
Trigger: TCTTGTTTGTCCTGTGCTCTGAGAGTGGTGAGTTATGGAGACCCAGGTCCCAGCCCACCCCACCTCAGCCAGGCTTGCACACTGACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530149.1
ENST00000532241.1
CDS-3UTR CAA 90 bp GCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGGGCCCGCTCAGTCTCTaGGGAAGGAAGGAGCGTGGG +
Preference number: 5 (lower is better)
Translates to: ALSEDRTGTTEHTYLGRVGPLSL*GRKERG
Trigger: CCCACGCTCCTTCCTTCCCAAGAGACTGAGCGGGCC...CACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp CCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTGCCAATCCAGAACATCCAGACACTaGAGGGGCAAGTTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: PGKCSTYPNTLALPVCQSRTSRH*RGKFPR
Trigger: CCTGGGGAACTTGCCCCTCAAGTGTCTGGATGTTCT...GGATTGGCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp GGACCAAGGAGAATGTCTAAGAGGCCTCCAGCCCTGCGCTCAGTGAAGACAGGAATGAGGCGGACAAGCTaGTTCCGCAGCATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GPRRMSKRPPALRSVKTGMRRTS*FRSISP
Trigger: TGGGGAGATGCTGCGGAACAAGCTTGTCCGCCTCAT...TCCTGTCTTCACTGAGCGCAGGGCTGGAGGCCTCTTAGACATTCTCCTTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp CAGTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAACCCCATGAGGCGGACAAGCTaGTTCCGCAGCATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: QCANPRWCLLCVHPHPNPMRRTS*FRSISP
Trigger: TGGGGAGATGCTGCGGAACAAGCTTGTCCGCCTCAT...GGGGTTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp TTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTGCTGTGGCTTCCCCAGGTaGCAACCCCAAGGAAGTCTC +
Preference number: 5 (lower is better)
Translates to: FLPGKCSTYPNTLALPVCCGFPR*QPQGSL
Trigger: GAGACTTCCTTGGGGTTGCAACCTGGGGAAGCCACA...GCACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS TCA 90 bp GCTCCGCCAGTCTCTTCCGGTCCTCCTGTTGGGCATCATCAAACGTaGAGCTCTGGGAGTGCTGCAGAGAGAACTCCTGGTTGTATGACC +
Preference number: 5 (lower is better)
Translates to: APPVSSGPPVGHHQT*SSGSAAERTPGCMT
Trigger: GGTCATACAACCAGGAGTTCTCTCTGCAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGACTGGCGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530889.1
CDS TCA 90 bp CACCAAGACAATCTCCACGTACCAGTGTGGACAGTGTGGAAGCACTaGCCACATCTGTGCAGGAGAACCAGTGCCAGAGCCACTGGGGGA +
Preference number: 5 (lower is better)
Translates to: HQDNLHVPVWTVWKH*PHLCRRTSARATGG
Trigger: TCCCCCAGTGGCTCTGGCACTGGTTCTCCTGCACAGATGTGGTCAGTGCTTCCACACTGTCCACACTGGTACGTGGAGATTGTCTTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS GCA 90 bp AGCTTGTCAAACATGGTCACCAGCTTCATGGCCTCGTGCTCCTTCTaGTCCTCTGTCATGCCCTCCATAGGGTTAGGCGGCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLSNMVTSFMASCSF*SSVMPSIGLGGFSS
Trigger: GGAGGAGAAGCCGCCTAACCCTATGGAGGGCATGACAGAGGAGCAGAAGGAGCACGAGGCCATGAAGCTGGTGACCATGTTTGACAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.6
ENST00000526557.1
ENST00000527696.5
ENST00000529275.1
ENST00000530149.1
CDS CCA 90 bp CATGTGGGCACACTTCCCTCCCAGAAAAAGCCCCATTCTCACCCGTaGAACTCCTCTGTGCGGTCTCCAGCAGTAGCGATCATCACACAG +
Preference number: 5 (lower is better)
Translates to: HVGTLPSQKKPHSHP*NSSVRSPAVAIITQ
Trigger: CTGTGTGATGATCGCTACTGCTGGAGACCGCACAGAGGAGTTCCACGGGTGAGAATGGGGCTTTTTCTGGGAGGGAAGTGTGCCCACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS-3UTR CAA 90 bp TGCCAAAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACTGTGACCCGCGCTTCTaGGGCCAGAAGTTCCAACAG +
Preference number: 5 (lower is better)
Translates to: CQNQRELGHCGYYSGQLNCDPRF*GQKFQQ
Trigger: CTGTTGGAACTTCTGGCCCAAGAAGCGCGGGTCACA...GTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS-3UTR CAA 90 bp TGTCTGCGGACTCTGGGACGGACCCCTCAGAGACAGAGATGTCAGCATAGCAGGAGGTTGCACAGGCACTaGAGGGACTCCAGTACAACA +
Preference number: 5 (lower is better)
Translates to: CLRTLGRTPQRQRCQHSRRLHRH*RDSSTT
Trigger: TGTTGTACTGGAGTCCCTCAAGTGCCTGTGCAACCT...CCTGCTATGCTGACATCTCTGTCTCTGAGGGGTCCGTCCCAGAGTCCGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR CAA 90 bp TTTGAGGATCTCCATGGCCCGCTCAGTCTCTTGGGAAGGAAGGAGCGTGGGTGGATGTTGAAGAGCACTTaGAGGATCTCCATGGCCCGC +
Preference number: 5 (lower is better)
Translates to: FEDLHGPLSLLGRKERGWMLKST*RISMAR
Trigger: GCGGGCCATGGAGATCCTCAAAGTGCTCTTCAACAT...CCACCCACGCTCCTTCCTTCCCAAGAGACTGAGCGGGCCATGGAGATCCTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS-3UTR CAA 90 bp GCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGACCAAGGAATCCCAGATGGTGCTaGCTTTGTGTGCACCCACAC +
Preference number: 5 (lower is better)
Translates to: ARTRALWILQWAAERGPRNPRWC*LCVHPH
Trigger: GTGTGGGTGCACACAAAGCAAGCACCATCTGGGATT...CCTTGGTCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp CAGTCTCTTCCGGTCCTCCTGTTGGGCATCATCAAACGTGAAGCTCTGGGAGTGAGCAGCCACTCCTGGTaGTATGACCGCAGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: QSLPVLLLGIIKREALGVSSHSW*YDRRAS
Trigger: GGAAGCTCTGCGGTCATACAACCAGGAGTGGCTGCT...CACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526982.1
CDS GCA 90 bp TGGAAAGGAATTTTCAGTCCTGGGCCATTGGGTTCGTTAGGCGTTTaGTGGGGAATGCAGGCGAACGGGATTCCCAGGTCCCTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: WKGIFSPGPLGSLGV*WGMQANGIPRSLPL
Trigger: CAAAGGCAGGGACCTGGGAATCCCGTTCGCCTGCATTCCCCAGCAAACGCCTAACGAACCCAATGGCCCAGGACTGAAAATTCCTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS CCA 90 bp TCCTCCACCCTCCCGGTCACAGGGTTTATGCTGTTTCCCAGTGGGTaGAATGTGGGGAATGCATTAGTGACTCTCCAGGACAGGAGGCAA +
Preference number: 5 (lower is better)
Translates to: SSTLPVTGFMLFPSG*NVGNALVTLQDRRQ
Trigger: TTGCCTCCTGTCCTGGAGAGTCACTAATGCATTCCCCACATTCCACCCACTGGGAAACAGCATAAACCCTGTGACCGGGAGGGTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526557.1
ENST00000530149.1
CDS CCA 90 bp CTTCTCCTCCACCCTCCCGGTCACAGGGTTTATGCTGTTTCCCAGTaGGTGGAATGTGGGGAATGCATTAGTGACTCTCCAGGACAGGAG +
Preference number: 5 (lower is better)
Translates to: LLLHPPGHRVYAVSQ*VECGECISDSPGQE
Trigger: CTCCTGTCCTGGAGAGTCACTAATGCATTCCCCACATTCCACCCACTGGGAAACAGCATAAACCCTGTGACCGGGAGGGTGGAGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526557.1
ENST00000530149.1
CDS CCA 90 bp GTCCACATGCTTCTCATGGAGGAAGGGTCTGGCTTCTTGCCAGGCTaGACCACAGAACAACCGGAAGAGTCGCCCATATCACACCACCAA +
Preference number: 5 (lower is better)
Translates to: VHMLLMEEGSGFLPG*TTEQPEESPISHHQ
Trigger: TTGGTGGTGTGATATGGGCGACTCTTCCGGTTGTTCTGTGGTCCAGCCTGGCAAGAAGCCAGACCCTTCCTCCATGAGAAGCATGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS-3UTR CAA 90 bp GGACCAAGGAGAATGTCTAAGAGGCCTCCAGCCCTGCGCTCAGTGAAGACAGGAAGGTTGCACAGGCACTaGAGGGACTCCAGTACAACA +
Preference number: 5 (lower is better)
Translates to: GPRRMSKRPPALRSVKTGRLHRH*RDSSTT
Trigger: TGTTGTACTGGAGTCCCTCAAGTGCCTGTGCAACCT...TCCTGTCTTCACTGAGCGCAGGGCTGGAGGCCTCTTAGACATTCTCCTTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp TCCAGCCCTGCGCTCAGTGAAGACAGGACAGGAACAACAGAGCATACATACCTTCTGCTGAGCACGAGGTaGCACAGGCACTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: SSPALSEDRTGTTEHTYLLLSTR*HRHLRD
Trigger: GTCCCTCAAGTGCCTGTGCAACCTCGTGCTCAGCAG...AAGGTATGTATGCTCTGTTGTTCCTGTCCTGTCTTCACTGAGCGCAGGGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp CAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGGGAGTTCAGCCTGTGTGTCTaGTGCAAACGCTTCTCTAGG +
Preference number: 5 (lower is better)
Translates to: QVATPRKSLEAAPVLMGEFSLCV*CKRFSR
Trigger: CCTAGAGAAGCGTTTGCACAAGACACACAGGCTGAA...CTCCCCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp TCCCCAGGTTGCAACCCCAAGGAAGTCTCTGGAAGCAGCACCAGTCCTGATGGGCTGGCTTTGGCTTCCTaGTACTCATCTGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: SPGCNPKEVSGSSTSPDGLALAS*YSSVSV
Trigger: CACAGACACAGATGAGTACAAGGAAGCCAAAGCCAG...CCCATCAGGACTGGTGCTGCTTCCAGAGACTTCCTTGGGGTTGCAACCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS TCA 90 bp AGAGAAAGGGGAGCAACCCAGTCTGGCCTGGACTCAGTTCCCTCTTaGAAAGCAAAGATCCTGCGTGTCCGTTTCAGTGGCCGTCATGAG +
Preference number: 5 (lower is better)
Translates to: RERGATQSGLDSVPS*KAKILRVRFSGRHE
Trigger: CTCATGACGGCCACTGAAACGGACACGCAGGATCTTTGCTTTTCAAGAGGGAACTGAGTCCAGGCCAGACTGGGTTGCTCCCCTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS-3UTR CAA 90 bp TTTCTAAGATGGAGAAGTGGGGGCGGGTGTGGATCCAGTGGGATGTGGCTTCCCCTGGCTTTGGCTTCCTaGTACTCATCTGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: FLRWRSGGGCGSSGMWLPLALAS*YSSVSV
Trigger: CACAGACACAGATGAGTACAAGGAAGCCAAAGCCAG...GGGAAGCCACATCCCACTGGATCCACACCCGCCCCCACTTCTCCATCTTAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000527696.5
CDS-3UTR CAA 90 bp AAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGACTGTTCCTGGAGAGCTaGTCAAACATGGTCACCAGC +
Preference number: 5 (lower is better)
Translates to: KPARTRALWILQWAAERGLFLES*SNMVTS
Trigger: GCTGGTGACCATGTTTGACAAGCTCTCCAGGAACAG...TCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp GTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTGTCTGTTCCTGGAGAGCTaGTCAAACATGGTCACCAGC +
Preference number: 5 (lower is better)
Translates to: VFSLGSAAHTPTHWLCQCLFLES*SNMVTS
Trigger: GCTGGTGACCATGTTTGACAAGCTCTCCAGGAACAG...ACACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp TGCCAAAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACCAGATGGTGCTTGCTTaGTGTGCACCCACACCCAAA +
Preference number: 5 (lower is better)
Translates to: CQNQRELGHCGYYSGQLNQMVLA*CAPTPK
Trigger: TTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTG...GTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp CCAAAACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGACAGATGGTGCTTGCTTaGTGTGCACCCACACCCAAA +
Preference number: 5 (lower is better)
Translates to: PKPARTRALWILQWAAERQMVLA*CAPTPK
Trigger: TTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTG...TCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS TCA 90 bp GCTCCGCCAGTCTCTTCCGGTCCTCCTGTTGGGCATCATCAAACGTaGAGCTCTGGGAGTGCTGCAGAGAGAACTAGTGAATTCAAATCC +
Preference number: 5 (lower is better)
Translates to: APPVSSGPPVGHHQT*SSGSAAERTSEFKS
Trigger: GGATTTGAATTCACTAGTTCTCTCTGCAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGACTGGCGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526982.1
ENST00000527468.1
CDS TCA 90 bp CTCTTGAAAAGCAAAGATCCTGCGTGTCCGTTTCAGTGGCCGTCATaGGGATTCAGTGACGCACAGGAAGCGCGATCCACTCGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LLKSKDPACPFQWPS*GFSDAQEARSTRSS
Trigger: AGAAGAGCGAGTGGATCGCGCTTCCTGTGCGTCACTGAATCCTCATGACGGCCACTGAAACGGACACGCAGGATCTTTGCTTTTCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS-3UTR CAA 90 bp AGACAAAAGAAAGTACTTCGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCAACGGGTCCAGGCAGTaGCGGTCCCGGGACAGGATT +
Preference number: 5 (lower is better)
Translates to: RQKKVLRLWNSRLSLSSSNGSRQ*RSRDRI
Trigger: AATCCTGTCCCGGGACCGCAACTGCCTGGACCCGTT...GCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACGAAGTACTTTCTTTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp AGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGATCGTCCACCTCCCCCTaGATGGAGTCCAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: RPLQSRDEKLDQRQIMNRSSTSP*MESRVM
Trigger: CATCACCCTGGACTCCATCAAGGGGGAGGTGGACGA...TCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp CTGCCAGTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAACTGGCTTTGGCTTCCTaGTACTCATCTGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: LPVCQSQMVLALCAPTPKLALAS*YSSVSV
Trigger: CACAGACACAGATGAGTACAAGGAAGCCAAAGCCAG...TTTGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp CTCTGCCAGTGTGCCAATCCCAGATGGTGCTTGCTTTGTGTGCACCCACACCCAAGCACAAGAAGACCGTaGCAGTCCAGAGATGAGAAA +
Preference number: 5 (lower is better)
Translates to: LCQCANPRWCLLCVHPHPSTRRP*QSRDEK
Trigger: TTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCT...TGGGTGTGGGTGCACACAAAGCAAGCACCATCTGGGATTGGCACACTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp GAGGCAAATCATGAACAGAACGGGAGTCAAGAGAAGGGGTTTCTAAGATGGAGAGATGCGGGCGGCCTATaGGCCTCTAACTCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: EANHEQNGSQEKGFLRWRDAGGL*ASNSGS
Trigger: GCTGCCTGAGTTAGAGGCCAATAGGCCGCCCGCATC...TCTCCATCTTAGAAACCCCTTCTCTTGACTCCCGTTCTGTTCATGATTTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527696.5
CDS TCA 90 bp GTCCAGATGCCCTGTAGTGCAGTCACAGCAATCAGAAGGAAGCTTTaGTCTGAGGTTCCTATGGGTCTCCTCAGGATGCTGAGGGACAAC +
Preference number: 5 (lower is better)
Translates to: VQMPCSAVTAIRRKL*SEVPMGLLRMLRDN
Trigger: GTTGTCCCTCAGCATCCTGAGGAGACCCATAGGAACCTCAGATCAAAGCTTCCTTCTGATTGCTGTGACTGCACTACAGGGCATCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS GCA 90 bp GCCATCTGCCACCTTCTGGTATCCCAGATAGCACTTAGGAACAGGTaGTTGATTCTGGAAGCTCTTGCCCATTTGTCATCCTGTCCCACC +
Preference number: 5 (lower is better)
Translates to: AICHLLVSQIALRNR*LILEALAHLSSCPT
Trigger: GGTGGGACAGGATGACAAATGGGCAAGAGCTTCCAGAATCAAGCACCTGTTCCTAAGTGCTATCTGGGATACCAGAAGGTGGCAGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526557.1
ENST00000530149.1
CDS GCA 90 bp GGTCACAGGGTTTATGCTGTTTCCCAGTGGGTGGAATGTGGGGAATaGATTAGTGACTCTCCAGGACAGGAGGCAAGCCACCTATTTTCC +
Preference number: 5 (lower is better)
Translates to: GHRVYAVSQWVECGE*ISDSPGQEASHLFS
Trigger: GGAAAATAGGTGGCTTGCCTCCTGTCCTGGAGAGTCACTAATGCATTCCCCACATTCCACCCACTGGGAAACAGCATAAACCCTGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526557.1
ENST00000530149.1
CDS GCA 90 bp AGTACCATACTGTTGCCACTACCCAAGGCCCAGTTGGCACATTCCTaGCCCCAAATTCATGGCTATGTCCAGTCTCACTCACCCAGACAA +
Preference number: 5 (lower is better)
Translates to: STILLPLPKAQLAHS*PQIHGYVQSHSPRQ
Trigger: TTGTCTGGGTGAGTGAGACTGGACATAGCCATGAATTTGGGGGCAGGAATGTGCCAACTGGGCCTTGGGTAGTGGCAACAGTATGGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CCA 90 bp GTGGCAAAAAGAAACGAGAACCGAATCCCCGCTCTGTGTACTTCGTaGACAGAGCAGGGAGTTCTTGACCCTCCTAGCATAATGTGCCTG +
Preference number: 5 (lower is better)
Translates to: VAKRNENRIPALCTS*TEQGVLDPPSIMCL
Trigger: CAGGCACATTATGCTAGGAGGGTCAAGAACTCCCTGCTCTGTCCACGAAGTACACAGAGCGGGGATTCGGTTCTCGTTTCTTTTTGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS-3UTR CAA 90 bp TATACTCGTATGGAAAGTTCTGACAGGTTTTCTCCCTGGGAAGTGCAGCACATAAACGGGTCCAGGCAGTaGCGGTCCCGGGACAGGATT +
Preference number: 5 (lower is better)
Translates to: YTRMESSDRFSPWEVQHINGSRQ*RSRDRI
Trigger: AATCCTGTCCCGGGACCGCAACTGCCTGGACCCGTT...TATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp AACCAGCGAGAACTCGGGCACTGTGGATACTACAGTGGGCAGCTGAACGAGGACCAGAGCATACATACCTaGGAAGGGTGTGTTCTGATA +
Preference number: 5 (lower is better)
Translates to: NQRELGHCGYYSGQLNEDQSIHT*EGCVLI
Trigger: TATCAGAACACACCCTTCCAAGGTATGTATGCTCTG...GTCCTCGTTCAGCTGCCCACTGTAGTATCCACAGTGCCCGAGTTCTCGCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp TCCAGAGATGAGAAACTGGACCAGAGGCAAATCATGAACAGAACGGGAGTCAAGGTGGGGCTGGAGAGCTaGTCAAACATGGTCACCAGC +
Preference number: 5 (lower is better)
Translates to: SRDEKLDQRQIMNRTGVKVGLES*SNMVTS
Trigger: GCTGGTGACCATGTTTGACAAGCTCTCCAGCCCCAC...CTTGACTCCCGTTCTGTTCATGATTTGCCTCTGGTCCAGTTTCTCATCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524854.5
CDS CCA 90 bp CTAAATCTCGGTTTATTGTACTCCAGCCTGCTTTCTGCAAGCTCCTaGAAGATGGTTAGAGCCCCAGCTGTCCAGATGCCCTGTAGTGCA +
Preference number: 5 (lower is better)
Translates to: LNLGLLYSSLLSASS*KMVRAPAVQMPCSA
Trigger: TGCACTACAGGGCATCTGGACAGCTGGGGCTCTAACCATCTTCCAGGAGCTTGCAGAAAGCAGGCTGGAGTACAATAAACCGAGATTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS-3UTR CAA 90 bp CTAGCACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGGCAAAAGGTTGCACAGGCACTaGAGGGACTCCAGTACAACA +
Preference number: 5 (lower is better)
Translates to: LAQEDRCSPEMRNWTRGKRLHRH*RDSSTT
Trigger: TGTTGTACTGGAGTCCCTCAAGTGCCTGTGCAACCT...TTTGCCTCTGGTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp CGTCTGTGGAATTCGAGGCTGAGCCTGAGTTCTAGCACAAGAAGACCGTTGCAGAGCACAAGAAGACCGTaGCAGTCCAGAGATGAGAAA +
Preference number: 5 (lower is better)
Translates to: RLWNSRLSLSSSTRRPLQSTRRP*QSRDEK
Trigger: TTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCT...CTGCAACGGTCTTCTTGTGCTAGAACTCAGGCTCAGCCTCGAATTCCACAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp AGGTTTTCTCCCTGGGAAGTGCAGCACATACCCCAACACACTGGCTCTGCCAGTCTGAACACATTCCTCTaGGCGCAGACAAAAGAAAGT +
Preference number: 5 (lower is better)
Translates to: RFSPWEVQHIPQHTGSASLNTFL*AQTKES
Trigger: ACTTTCTTTTGTCTGCGCCAAGAGGAATGTGTTCAG...ACTGGCAGAGCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp GGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGAGAACATCCAGACACTaGAGGGGCAAGTTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GQEQQSIHTLEGCVLIYSRTSRH*RGKFPR
Trigger: CCTGGGGAACTTGCCCCTCAAGTGTCTGGATGTTCT...CGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp GGACAGGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGATGTTGAAGAGCACTTaGAGGATCTCCATGGCCCGC +
Preference number: 5 (lower is better)
Translates to: GQEQQSIHTLEGCVLIYSMLKST*RISMAR
Trigger: GCGGGCCATGGAGATCCTCAAAGTGCTCTTCAACAT...CGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS TCA 90 bp GAAGGAAGCTTTGATCTGAGGTTCCTATGGGTCTCCTCAGGATGCTaGGGGACAACTATGCTTGTAATCAAGGGCTGCCTGTGTTTAAGA +
Preference number: 5 (lower is better)
Translates to: EGSFDLRFLWVSSGC*GTTMLVIKGCLCLR
Trigger: TCTTAAACACAGGCAGCCCTTGATTACAAGCATAGTTGTCCCTCAGCATCCTGAGGAGACCCATAGGAACCTCAGATCAAAGCTTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS-3UTR CAA 90 bp TATACTCGTATGGAAAGTTCTGACAGGTTTTCTCCCTGGGAAGTGCAGCACATAAATCCCAGATGGTGCTaGCTTTGTGTGCACCCACAC +
Preference number: 5 (lower is better)
Translates to: YTRMESSDRFSPWEVQHINPRWC*LCVHPH
Trigger: GTGTGGGTGCACACAAAGCAAGCACCATCTGGGATT...TATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAGAACTTTCCATACGAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS-3UTR CAA 90 bp AGCCTGAGTTCTAGCACAAGAAGACCGTTGCAGTCCAGAGATGAGAAACTGGACCAGAGCATACATACCTaGGAAGGGTGTGTTCTGATA +
Preference number: 5 (lower is better)
Translates to: SLSSSTRRPLQSRDEKLDQSIHT*EGCVLI
Trigger: TATCAGAACACACCCTTCCAAGGTATGTATGCTCTG...GTCCAGTTTCTCATCTCTGGACTGCAACGGTCTTCTTGTGCTAGAACTCAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS GCA 90 bp GGAAGAAAACACAAAGCAATTAAAGCTTTAGACTCGCACACACATTaGCCTCAGATGTTGGTGGCAAAAAGAAACGAGAACCGAATCCCC +
Preference number: 5 (lower is better)
Translates to: GRKHKAIKALDSHTH*PQMLVAKRNENRIP
Trigger: GGGGATTCGGTTCTCGTTTCTTTTTGCCACCAACATCTGAGGGCAATGTGTGTGCGAGTCTAAAGCTTTAATTGCTTTGTGTTTTCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS-3UTR CAA 90 bp GGAACAACAGAGCATACATACCTTGGAAGGGTGTGTTCTGATATACTCGTATGGCTGAACACATTCCTCTaGGCGCAGACAAAAGAAAGT +
Preference number: 5 (lower is better)
Translates to: GTTEHTYLGRVCSDILVWLNTFL*AQTKES
Trigger: ACTTTCTTTTGTCTGCGCCAAGAGGAATGTGTTCAG...CCATACGAGTATATCAGAACACACCCTTCCAAGGTATGTATGCTCTGTTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000527696.5
CDS CCA 72 bp CCGTCTCCACGGCTTCTGCAACCGCCCGGGGCTCCATaGCGCGCCGGGGAAGGCGGGACGGGCCCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: PSPRLLQPPGAP*RAGEGGTGPSS
Trigger: TGAGGAAGGGCCCGTCCCGCCTTCCCCGGCGCGCCATGGAGCCCCGGGCGGTTGCAGAAGCCGTGGAGACGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325207.9
ENST00000526104.6
ENST00000526982.1
ENST00000528357.5
CDS TCA 72 bp CCTCTGAGTACTGGCCCTCGGGCCGGCCTCCTGCCATaGGGCCCCTGGCAGCCAGAAGGCCAGCAGCATTCC +
Preference number: 6 (lower is better)
Translates to: PLSTGPRAGLLP*GPWQPEGQQHS
Trigger: GGAATGCTGCTGGCCTTCTGGCTGCCAGGGGCCTCATGGCAGGAGGCCGGCCCGAGGGCCAGTACTCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.6
ENST00000527696.5
ENST00000530149.1
CDS GCA 72 bp CTCCACCAGGCCCTTCTTCCTGGGGCCACCCGTCCCTaGCCCTTTACCCCTTGGGCCAGCACCCACCTTCCG +
Preference number: 6 (lower is better)
Translates to: LHQALLPGATRP*PFTPWASTHLP
Trigger: CGGAAGGTGGGTGCTGGCCCAAGGGGTAAAGGGGCAGGGACGGGTGGCCCCAGGAAGAAGGGCCTGGTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527696.5
ENST00000532373.1
CDS CCA 72 bp GCGTCTGGTGGCGCTTTAACGGGGCGCAGCGTCTGGTaGCGCTTTAAGGGGGCGCGGCCTGAGGCAGAACTG +
Preference number: 6 (lower is better)
Translates to: ASGGALTGRSVW*RFKGARPEAEL
Trigger: CAGTTCTGCCTCAGGCCGCGCCCCCTTAAAGCGCCACCAGACGCTGCGCCCCGTTAAAGCGCCACCAGACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000526104.6
CDS GCA 72 bp CATAATCACATCCTCCTCACCCGTCTCCACGGCTTCTaGAACCGCCCGGGGCTCCATGGCGCGCCGGGGAAG +
Preference number: 6 (lower is better)
Translates to: HNHILLTRLHGF*NRPGLHGAPGK
Trigger: CTTCCCCGGCGCGCCATGGAGCCCCGGGCGGTTGCAGAAGCCGTGGAGACGGGTGAGGAGGATGTGATTATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325207.9
ENST00000526104.6
ENST00000526982.1
ENST00000528357.5
ENST00000532373.1
CDS GCA 72 bp GGCGGCCTATTGGCCTCTAACTCAGGCAGCAGCCACTaGTCAGAACGGATGGCAGGGTCGGCACTCGCCCCC +
Preference number: 6 (lower is better)
Translates to: GGLLASNSGSSH*SERMAGSALAP
Trigger: GGGGGCGAGTGCCGACCCTGCCATCCGTTCTGAGCAGTGGCTGCTGCCTGAGTTAGAGGCCAATAGGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527468.1
ENST00000527696.5
CDS CCA 72 bp GGTGGCGCTTTAAGGGGGCGCGGCCTGAGGCAGAACTaGCGGCTCGGAGGTTTTAAGACCCGAGTCGAGGGG +
Preference number: 6 (lower is better)
Translates to: GGALRGRGLRQN*RLGGFKTRVEG
Trigger: CCCCTCGACTCGGGTCTTAAAACCTCCGAGCCGCCAGTTCTGCCTCAGGCCGCGCCCCCTTAAAGCGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000526104.6
CDS CAA 72 bp TGCAGGCTCTGGCGGCTGGTGAACGGGTCCAGGCAGTaGCGGTCCCGGGACAGGATTCGGACACTCTTCCGG +
Preference number: 6 (lower is better)
Translates to: CRLWRLVNGSRQ*RSRDRIRTLFR
Trigger: CCGGAAGAGTGTCCGAATCCTGTCCCGGGACCGCAACTGCCTGGACCCGTTCACCAGCCGCCAGAGCCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528357.5
CDS CAA 90 bp GCTAGTGCCTGCAGGCTCTGGCGGCTGGTGAACGGGTCCAGGCAGTaGCGGTCCCGGGACAGGATTCGGACACTCTTCCGGTCCTCCTGT +
Preference number: 6 (lower is better)
Translates to: ASACRLWRLVNGSRQ*RSRDRIRTLFRSSC
Trigger: ACAGGAGGACCGGAAGAGTGTCCGAATCCTGTCCCGGGACCGCAACTGCCTGGACCCGTTCACCAGCCGCCAGAGCCTGCAGGCACTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528357.5
CDS CCA 72 bp GGGGAGGTGGCCATCCCTGGGCCTTCAGGAACTTCCTaGCTGGGCGGTGCATCCGGGCACATTCAGTCAGCA +
Preference number: 6 (lower is better)
Translates to: GEVAIPGPSGTS*LGGASGHIQSA
Trigger: TGCTGACTGAATGTGCCCGGATGCACCGCCCAGCCAGGAAGTTCCTGAAGGCCCAGGGATGGCCACCTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325207.9
CDS CCA 72 bp AGGGGGCAGCACCTGGGCCTTCAGGAACTTCCTGGCTaGGCGGTGCATCCGGGCACATTCAGTCAGCACGCT +
Preference number: 6 (lower is better)
Translates to: RGQHLGLQELPG*AVHPGTFSQHA
Trigger: AGCGTGCTGACTGAATGTGCCCGGATGCACCGCCCAGCCAGGAAGTTCCTGAAGGCCCAGGTGCTGCCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526104.6
ENST00000527696.5
ENST00000527728.1
CDS CCA 72 bp CCTCTAACTCAGGCAGCAGCCACTGCTCAGAACGGATaGCAGGGTCGGCACTCGCCCCCATCCCTACACGCC +
Preference number: 6 (lower is better)
Translates to: PLTQAAATAQNG*QGRHSPPSLHA
Trigger: GGCGTGTAGGGATGGGGGCGAGTGCCGACCCTGCCATCCGTTCTGAGCAGTGGCTGCTGCCTGAGTTAGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527468.1
ENST00000527696.5
CDS CAA 72 bp GGGGTAGGATCCGCGTCCGCTGATGCGGGCGGCCTATaGGCCTCTAACTCAGGCAGCAGCCACTCCTGGTTG +
Preference number: 6 (lower is better)
Translates to: GVGSASADAGGL*ASNSGSSHSWL
Trigger: CAACCAGGAGTGGCTGCTGCCTGAGTTAGAGGCCAATAGGCCGCCCGCATCAGCGGACGCGGATCCTACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526982.1
ENST00000626818.1
CDS GCA 72 bp AGCACCTGGGCCTTCAGGAACTTCCTGGCTGGGCGGTaGATCCGGGCACATTCAGTCAGCACGCTCAGCACG +
Preference number: 6 (lower is better)
Translates to: STWAFRNFLAGR*IRAHSVSTLST
Trigger: CGTGCTGAGCGTGCTGACTGAATGTGCCCGGATGCACCGCCCAGCCAGGAAGTTCCTGAAGGCCCAGGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526104.6
ENST00000527696.5
ENST00000527728.1
CDS GCA 72 bp GCACAGGAAGCGCGATCCACTCGCTCTTCTAACAAGTaGCCGGGAGCAAAGGCGTCTACGGCCCCCAGTCCC +
Preference number: 6 (lower is better)
Translates to: AQEARSTRSSNK*PGAKASTAPSP
Trigger: GGGACTGGGGGCCGTAGACGCCTTTGCTCCCGGGCACTTGTTAGAAGAGCGAGTGGATCGCGCTTCCTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS CAA 72 bp GGGGTAGGATCCGCGTCCGCTGATGCGGGCGGCCTATaGGCCTCTAACTCAGGCAGCAGCCACTGCTCAGAA +
Preference number: 6 (lower is better)
Translates to: GVGSASADAGGL*ASNSGSSHCSE
Trigger: TTCTGAGCAGTGGCTGCTGCCTGAGTTAGAGGCCAATAGGCCGCCCGCATCAGCGGACGCGGATCCTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527468.1
ENST00000527696.5
CDS CAA 90 bp ATCCACAGAGGGGTAGGATCCGCGTCCGCTGATGCGGGCGGCCTATaGGCCTCTAACTCAGGCAGCAGCCACTCCTGGTTGTATGACCGC +
Preference number: 6 (lower is better)
Translates to: IHRGVGSASADAGGL*ASNSGSSHSWLYDR
Trigger: GCGGTCATACAACCAGGAGTGGCTGCTGCCTGAGTTAGAGGCCAATAGGCCGCCCGCATCAGCGGACGCGGATCCTACCCCTCTGTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526982.1
ENST00000626818.1
CDS CAA 90 bp ATCCACAGAGGGGTAGGATCCGCGTCCGCTGATGCGGGCGGCCTATaGGCCTCTAACTCAGGCAGCAGCCACTGCTCAGAACGGATGGCA +
Preference number: 6 (lower is better)
Translates to: IHRGVGSASADAGGL*ASNSGSSHCSERMA
Trigger: TGCCATCCGTTCTGAGCAGTGGCTGCTGCCTGAGTTAGAGGCCAATAGGCCGCCCGCATCAGCGGACGCGGATCCTACCCCTCTGTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527468.1
ENST00000527696.5
CDS TCA 72 bp CGCGGGCTTCTGCCCGAGGGGTCTGCTCCTTCCTCATaGCCCGCCTGTGAATCCTTCCTAACCGTTAGGACC +
Preference number: 6 (lower is better)
Translates to: RGLLPEGSAPSS*PACESFLTVRT
Trigger: GGTCCTAACGGTTAGGAAGGATTCACAGGCGGGTCATGAGGAAGGAGCAGACCCCTCGGGCAGAAGCCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS GCA 72 bp CAGTCAGGGTCCGAGTCAGGGTCCGAGGAGAGCTGCTaGTCCATAGTCTCGCACATGGCATCCTGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: QSGSESGSEESC*SIVSHMASCRD
Trigger: GTCCCTGCAGGATGCCATGTGCGAGACTATGGAGCAGCAGCTCTCCTCGGACCCTGACTCGGACCCTGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.6
ENST00000526557.1
ENST00000527696.5
ENST00000531541.1
CDS GCA 72 bp CCTCAGTCAGGGTCCGAGTCAGGGTCCGAGGAGAGCTaGTGCTCCATAGTCTCGCACATGGCATCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: PQSGSESGSEES*CSIVSHMASCR
Trigger: CCTGCAGGATGCCATGTGCGAGACTATGGAGCAGCAGCTCTCCTCGGACCCTGACTCGGACCCTGACTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.6
ENST00000526557.1
ENST00000527696.5
ENST00000531541.1
CDS GCA 72 bp GTGGAAGCACTGACCACATCTGTGCAGGAGAACCAGTaGCAGAGCCACTGGGGGAGCCTGCACAGCCATCCC +
Preference number: 6 (lower is better)
Translates to: VEALTTSVQENQ*QSHWGSLHSHP
Trigger: GGGATGGCTGTGCAGGCTCCCCCAGTGGCTCTGGCACTGGTTCTCCTGCACAGATGTGGTCAGTGCTTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CCA 72 bp CATCCCCCAGGAGCACCAGCTCCTCAGCCTTATACCTaGGCCTTCAGGAACTTCCTGGCTGGGCGGTGCATC +
Preference number: 6 (lower is better)
Translates to: HPPGAPAPQPYT*AFRNFLAGRCI
Trigger: GATGCACCGCCCAGCCAGGAAGTTCCTGAAGGCCCAGGTATAAGGCTGAGGAGCTGGTGCTCCTGGGGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527039.1
ENST00000530149.1
CDS CCA 72 bp CTACAGGGGTCCACATGGGTGTGGAAGCAGGGACTATaGGGCTGTGAGTGGAGACCCGAGGGTGTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: LQGSTWVWKQGL*GCEWRPEGVLG
Trigger: CCCCAACACACCCTCGGGTCTCCACTCACAGCCCCATAGTCCCTGCTTCCACACCCATGTGGACCCCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS TCA 72 bp AGCGCTAGGGACCAAAGCCAAGGGCAGGGACTGATCTaGGAGGCACTGCCACTCAGCTGTACAGTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: SARDQSQGQGLI*EALPLSCTVGS
Trigger: GGACCCCACTGTACAGCTGAGTGGCAGTGCCTCTCAGATCAGTCCCTGCCCTTGGCTTTGGTCCCTAGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS TCA 72 bp GTCCACATGGGTGTGGAAGCAGGGACTATGGGGCTGTaGGTGGAGACCCGAGGGTGTGTTGGGGGTACACAC +
Preference number: 6 (lower is better)
Translates to: VHMGVEAGTMGL*VETRGCVGGTH
Trigger: GTGTGTACCCCCAACACACCCTCGGGTCTCCACTCACAGCCCCATAGTCCCTGCTTCCACACCCATGTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS GCA 72 bp CAGTCAGGGTCCGAGTCAGGGTCCGAGGAGAGCTGCTaGTCCATAGTCTCGCACATGGCATCCTGGAGAGCT +
Preference number: 6 (lower is better)
Translates to: QSGSESGSEESC*SIVSHMASWRA
Trigger: AGCTCTCCAGGATGCCATGTGCGAGACTATGGAGCAGCAGCTCTCCTCGGACCCTGACTCGGACCCTGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529275.1
CDS GCA 72 bp CCTCAGTCAGGGTCCGAGTCAGGGTCCGAGGAGAGCTaGTGCTCCATAGTCTCGCACATGGCATCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: PQSGSESGSEES*CSIVSHMASWR
Trigger: TCTCCAGGATGCCATGTGCGAGACTATGGAGCAGCAGCTCTCCTCGGACCCTGACTCGGACCCTGACTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529275.1
CDS GCA 72 bp AGAAGTTCCAACAGGAAACGATCTCAGCCCCCACCGTaGCCTGCCACACACACAGTGACGCCCCTCGAGCTC +
Preference number: 6 (lower is better)
Translates to: RSSNRKRSQPPP*PATHTVTPLEL
Trigger: GAGCTCGAGGGGCGTCACTGTGTGTGTGGCAGGGCACGGTGGGGGCTGAGATCGTTTCCTGTTGGAACTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS GCA 72 bp TATACCTGGGCCTTCAGGAACTTCCTGGCTGGGCGGTaGATCCGGGCACATTCAGTCAGCACGCTCAGCACG +
Preference number: 6 (lower is better)
Translates to: YTWAFRNFLAGR*IRAHSVSTLST
Trigger: CGTGCTGAGCGTGCTGACTGAATGTGCCCGGATGCACCGCCCAGCCAGGAAGTTCCTGAAGGCCCAGGTATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527039.1
ENST00000530149.1
CDS GCA 72 bp ACAGAGCAGGGAGTTCTTGACCCTCCTAGCATAATGTaGCTGGACCCCAGCACCAGCAGTGGCAGCGACGGG +
Preference number: 6 (lower is better)
Translates to: TEQGVLDPPSIM*LDPSTSSGSDG
Trigger: CCCGTCGCTGCCACTGCTGGTGCTGGGGTCCAGGCACATTATGCTAGGAGGGTCAAGAACTCCCTGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 90 bp GTCGCTCTGAACCGAACTGACCCCTCTCCTTGTGACCCGCGCTTCTaGGGCCAGAAGTTCCAACAGGAAACGATCTCAGCCCCCACCGTG +
Preference number: 6 (lower is better)
Translates to: VALNRTDPSPCDPRF*GQKFQQETISAPTV
Trigger: CACGGTGGGGGCTGAGATCGTTTCCTGTTGGAACTTCTGGCCCAAGAAGCGCGGGTCACAAGGAGAGGGGTCAGTTCGGTTCAGAGCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000526104.6
CDS TCA 72 bp GGGCTGCAACGGGCTGTGAGGAAGTGCTGTTTTTGCTaGCACCGGACGGTGGGAAGTGAGCCGGGAAAAGAC +
Preference number: 6 (lower is better)
Translates to: GLQRAVRKCCFC*HRTVGSEPGKD
Trigger: GTCTTTTCCCGGCTCACTTCCCACCGTCCGGTGTCAGCAAAAACAGCACTTCCTCACAGCCCGTTGCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS TCA 72 bp CTGGGCTCTCAGGTGGTTCTGGTTCAGAGCCGGGGTTaGGGACGACCATCTAGACATGTGGGCACACTTCCC +
Preference number: 6 (lower is better)
Translates to: LGSQVVLVQSRG*GRPSRHVGTLP
Trigger: GGGAAGTGTGCCCACATGTCTAGATGGTCGTCCTCAACCCCGGCTCTGAACCAGAACCACCTGAGAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS GCA 72 bp GGCCTCCCTCCAGAAGCGGCACAGGTAACCAGCTCCTaGCATCTGCCACCTTCTGGTATCCCAGATAGCACT +
Preference number: 6 (lower is better)
Translates to: GLPPEAAQVTSS*HLPPSGIPDST
Trigger: AGTGCTATCTGGGATACCAGAAGGTGGCAGATGGCAGGAGCTGGTTACCTGTGCCGCTTCTGGAGGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526557.1
ENST00000530149.1
CDS GCA 72 bp AAGAAGGGTTCCTGTGAGGAGCCCCACTCATCCCACTaGTGCCTGCTGAGGCTCCACTGTCTGTTGCACTCC +
Preference number: 6 (lower is better)
Translates to: KKGSCEEPHSSH*CLLRLHCLLHS
Trigger: GGAGTGCAACAGACAGTGGAGCCTCAGCAGGCAGCAGTGGGATGAGTGGGGCTCCTCACAGGAACCCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CCA 72 bp ACCAGCAGCTCCGCCAGTCTCTTCCGGTCCTCCTGTTaGGCATCATCAAACGTGAAGCTCTGGGAGTGCTCC +
Preference number: 6 (lower is better)
Translates to: TSSSASLFRSSC*ASSNVKLWECS
Trigger: GGAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGACTGGCGGAGCTGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000526104.6
CDS CCA 72 bp TTCAGTCCTGGGCCATTGGGTTCGTTAGGCGTTTGCTaGGGAATGCAGGCGAACGGGATTCCCAGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: FSPGPLGSLGVC*GMQANGIPRSL
Trigger: CAGGGACCTGGGAATCCCGTTCGCCTGCATTCCCCAGCAAACGCCTAACGAACCCAATGGCCCAGGACTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS CCA 72 bp TCAGCCTTATACCTGGGCCTTCAGGAACTTCCTGGCTaGGCGGTGCATCCGGGCACATTCAGTCAGCACGCT +
Preference number: 6 (lower is better)
Translates to: SALYLGLQELPG*AVHPGTFSQHA
Trigger: AGCGTGCTGACTGAATGTGCCCGGATGCACCGCCCAGCCAGGAAGTTCCTGAAGGCCCAGGTATAAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527039.1
ENST00000530149.1
CDS CCA 72 bp CTCCTCAGCCTTATACCTGGGCCTTCAGGAACTTCCTaGCTGGGCGGTGCATCCGGGCACATTCAGTCAGCA +
Preference number: 6 (lower is better)
Translates to: LLSLIPGPSGTS*LGGASGHIQSA
Trigger: TGCTGACTGAATGTGCCCGGATGCACCGCCCAGCCAGGAAGTTCCTGAAGGCCCAGGTATAAGGCTGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527039.1
ENST00000530149.1
CDS CCA 72 bp CTAGCTGTGTGTCCAGTGCCAGCTCCCTATCCTGACTaGCTCGCAGGCACCTTGTGTGTCCCTTGCTTAGGC +
Preference number: 6 (lower is better)
Translates to: LAVCPVPAPYPD*LAGTLCVPCLG
Trigger: GCCTAAGCAAGGGACACACAAGGTGCCTGCGAGCCAGTCAGGATAGGGAGCTGGCACTGGACACACAGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 72 bp GACCAGCAGCTCCGCCAGTCTCTTCCGGTCCTCCTGTaGGGCATCATCAAACGTGAAGCTCTGGGAGTGCTC +
Preference number: 6 (lower is better)
Translates to: DQQLRQSLPVLL*GIIKREALGVL
Trigger: GAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGACTGGCGGAGCTGCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000526104.6
CDS CAA 72 bp CACTGGGGGAGCCTGCACAGCCATCCCCAGCCTACCTaGTGCAAACGCTTCTCTAGGAAGATGAGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: HWGSLHSHPQPT*CKRFSRKMRRA
Trigger: TGCCCTCCTCATCTTCCTAGAGAAGCGTTTGCACAAGGTAGGCTGGGGATGGCTGTGCAGGCTCCCCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 90 bp TGCCAGAGCCACTGGGGGAGCCTGCACAGCCATCCCCAGCCTACCTaGTGCAAACGCTTCTCTAGGAAGATGAGGAGGGCACGAATCACA +
Preference number: 6 (lower is better)
Translates to: CQSHWGSLHSHPQPT*CKRFSRKMRRARIT
Trigger: TGTGATTCGTGCCCTCCTCATCTTCCTAGAGAAGCGTTTGCACAAGGTAGGCTGGGGATGGCTGTGCAGGCTCCCCCAGTGGCTCTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 90 bp ACCCTCTTCACATCTGTGTCCAGGTGTGTCATGAGGCGGACAAGCTaGTTCCGCAGCATCTCCCCAACCTCAGGCCGTGTCCTCACATCC +
Preference number: 6 (lower is better)
Translates to: TLFTSVSRCVMRRTS*FRSISPTSGRVLTS
Trigger: GGATGTGAGGACACGGCCTGAGGTTGGGGAGATGCTGCGGAACAAGCTTGTCCGCCTCATGACACACCTGGACACAGATGTGAAGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325207.9
ENST00000526104.6
ENST00000527696.5
ENST00000527728.1
ENST00000530149.1
ENST00000532241.1
CDS CAA 90 bp CCCTTCCCACCAACATACACAACAGCTGGTCCTGGCGGCAGAGGTTaGGGAAGAGGCCCCTCTGCAGTTAGTCAGCAGAAGGCCAAGAGT +
Preference number: 6 (lower is better)
Translates to: PFPPTYTTAGPGGRG*GRGPSAVSQQKAKS
Trigger: ACTCTTGGCCTTCTGCTGACTAACTGCAGAGGGGCCTCTTCCCAAACCTCTGCCGCCAGGACCAGCTGTTGTGTATGTTGGTGGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS GCA 72 bp AACATGGTCACCAGCTTCATGGCCTCGTGCTCCTTCTaGTCCTCTGTCATGCCCTCCATAGGGTTAGGCGGC +
Preference number: 6 (lower is better)
Translates to: NMVTSFMASCSF*SSVMPSIGLGG
Trigger: GCCGCCTAACCCTATGGAGGGCATGACAGAGGAGCAGAAGGAGCACGAGGCCATGAAGCTGGTGACCATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325207.9
ENST00000524854.5
ENST00000526104.6
ENST00000526557.1
ENST00000527696.5
ENST00000529275.1
ENST00000530149.1
CDS GCA 72 bp GCGGCTTCTCCTCCACCCTCCCGGTCACAGGGTTTATaGTGTTTCCCAGTGGGTGGAATGTGGGGAATGCAT +
Preference number: 6 (lower is better)
Translates to: AASPPPSRSQGL*CFPVGGMWGMH
Trigger: ATGCATTCCCCACATTCCACCCACTGGGAAACAGCATAAACCCTGTGACCGGGAGGGTGGAGGAGAAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526557.1
ENST00000530149.1
CDS CCA 72 bp ACCGAACTGACCCCTCTCCTTGTGACCCGCGCTTCTTaGGCCAGAAGTTCCAACAGGAAACGATCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: TELTPLLVTRAS*ARSSNRKRSQP
Trigger: GGGCTGAGATCGTTTCCTGTTGGAACTTCTGGCCCAAGAAGCGCGGGTCACAAGGAGAGGGGTCAGTTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000526104.6
CDS CCA 72 bp CGGGACAGGATTCGGACACTCTTCCGGTCCTCCTGTTaGGCATCATCAAACGTGAAGCTCTGGGAGTGCTCC +
Preference number: 6 (lower is better)
Translates to: RDRIRTLFRSSC*ASSNVKLWECS
Trigger: GGAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGTGTCCGAATCCTGTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528357.5
CDS CCA 72 bp ATGCAGGCGAACGGGATTCCCAGGTCCCTGCCTTTGTaGAGCTTATGTTCCAGAGGGGAAGGGGGACAAGGA +
Preference number: 6 (lower is better)
Translates to: MQANGIPRSLPL*SLCSRGEGGQG
Trigger: TCCTTGTCCCCCTTCCCCTCTGGAACATAAGCTCCACAAAGGCAGGGACCTGGGAATCCCGTTCGCCTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS CAA 72 bp ACATCTGTGTCCAGGTGTGTCATGAGGCGGACAAGCTaGTTCCGCAGCATCTCCCCAACCTCAGGCCGTGTC +
Preference number: 6 (lower is better)
Translates to: TSVSRCVMRRTS*FRSISPTSGRV
Trigger: GACACGGCCTGAGGTTGGGGAGATGCTGCGGAACAAGCTTGTCCGCCTCATGACACACCTGGACACAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325207.9
ENST00000526104.6
ENST00000527696.5
ENST00000527728.1
ENST00000530149.1
ENST00000532241.1
CDS CAA 72 bp CCGGGACAGGATTCGGACACTCTTCCGGTCCTCCTGTaGGGCATCATCAAACGTGAAGCTCTGGGAGTGCTC +
Preference number: 6 (lower is better)
Translates to: PGQDSDTLPVLL*GIIKREALGVL
Trigger: GAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGTGTCCGAATCCTGTCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528357.5
CDS TCA 72 bp ATTCCCATAGCCTGTGTACTTGATGAATCGGGGCACTaGGGGGCAAGGCAGAGGTCAGTGTGCAAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: IPIACVLDESGH*GARQRSVCKPG
Trigger: GCCAGGCTTGCACACTGACCTCTGCCTTGCCCCTCAGTGCCCCGATTCATCAAGTACACAGGCTATGGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530149.1
ENST00000532241.1
CDS TCA 72 bp CCACCTTCCGGTCCTCCTGTTGGGCATCATCAAACGTaGAGCTCTGGGAGTGCTCCTGGTTGTATGACCGCA +
Preference number: 6 (lower is better)
Translates to: PPSGPPVGHHQT*SSGSAPGCMTA
Trigger: TGCGGTCATACAACCAGGAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532373.1
CDS GCA 72 bp ATTTTCAGTCCTGGGCCATTGGGTTCGTTAGGCGTTTaGTGGGGAATGCAGGCGAACGGGATTCCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: IFSPGPLGSLGV*WGMQANGIPRS
Trigger: GGACCTGGGAATCCCGTTCGCCTGCATTCCCCAGCAAACGCCTAACGAACCCAATGGCCCAGGACTGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS CCA 72 bp GGCTGGAGAGCTTGTCAAACATGGTCACCAGCTTCATaGCCTCGTGCTCCTTCTGCTCCTCTGTCATGCCCT +
Preference number: 6 (lower is better)
Translates to: GWRACQTWSPAS*PRAPSAPLSCP
Trigger: AGGGCATGACAGAGGAGCAGAAGGAGCACGAGGCCATGAAGCTGGTGACCATGTTTGACAAGCTCTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524854.5
CDS CCA 72 bp GGAAAGGTGCAGTGGGGCTGGAGAGCTTGTCAAACATaGTCACCAGCTTCATGGCCTCGTGCTCCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: GKVQWGWRACQT*SPASWPRAPSA
Trigger: AGCAGAAGGAGCACGAGGCCATGAAGCTGGTGACCATGTTTGACAAGCTCTCCAGCCCCACTGCACCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524854.5
CDS CAA 72 bp AACCGAACTGACCCCTCTCCTTGTGACCCGCGCTTCTaGGGCCAGAAGTTCCAACAGGAAACGATCTCAGCC +
Preference number: 6 (lower is better)
Translates to: NRTDPSPCDPRF*GQKFQQETISA
Trigger: GGCTGAGATCGTTTCCTGTTGGAACTTCTGGCCCAAGAAGCGCGGGTCACAAGGAGAGGGGTCAGTTCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000526104.6
CDS CAA 72 bp GTCCACATGCTTCTCATGGAGGAAGGGTCTGGCTTCTaGCCAGGCTGGACCACAGAACAACCGGAAGAGTCG +
Preference number: 6 (lower is better)
Translates to: VHMLLMEEGSGF*PGWTTEQPEES
Trigger: CGACTCTTCCGGTTGTTCTGTGGTCCAGCCTGGCAAGAAGCCAGACCCTTCCTCCATGAGAAGCATGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 72 bp CCAACATACACAACAGCTGGTCCTGGCGGCAGAGGTTaGGGAAGAGGCCCCTCTGCAGTTAGTCAGCAGAAG +
Preference number: 6 (lower is better)
Translates to: PTYTTAGPGGRG*GRGPSAVSQQK
Trigger: CTTCTGCTGACTAACTGCAGAGGGGCCTCTTCCCAAACCTCTGCCGCCAGGACCAGCTGTTGTGTATGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 90 bp GTGGAAAGGAATTTTCAGTCCTGGGCCATTGGGTTCGTTAGGCGTTaGCTGGGGAATGCAGGCGAACGGGATTCCCAGGTCCCTGCCTTT +
Preference number: 6 (lower is better)
Translates to: VERNFQSWAIGFVRR*LGNAGERDSQVPAF
Trigger: AAAGGCAGGGACCTGGGAATCCCGTTCGCCTGCATTCCCCAGCAAACGCCTAACGAACCCAATGGCCCAGGACTGAAAATTCCTTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS TCA 72 bp GTCTCTTCCGGTCCTCCTGTTGGGCATCATCAAACGTaGAGCTCTGGGAGTGCTCCTGGTTGTATGACCGCA +
Preference number: 6 (lower is better)
Translates to: VSSGPPVGHHQT*SSGSAPGCMTA
Trigger: TGCGGTCATACAACCAGGAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325207.9
ENST00000526104.6
CDS TCA 72 bp CACTCTTCCGGTCCTCCTGTTGGGCATCATCAAACGTaGAGCTCTGGGAGTGCTCCTGGTTGTATGACCGCA +
Preference number: 6 (lower is better)
Translates to: HSSGPPVGHHQT*SSGSAPGCMTA
Trigger: TGCGGTCATACAACCAGGAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528357.5
CDS TCA 72 bp AGCAAAGATCCTGCGTGTCCGTTTCAGTGGCCGTCATaGGGATTCAGTGACGCACAGGAAGCGCGATCCACT +
Preference number: 6 (lower is better)
Translates to: SKDPACPFQWPS*GFSDAQEARST
Trigger: AGTGGATCGCGCTTCCTGTGCGTCACTGAATCCTCATGACGGCCACTGAAACGGACACGCAGGATCTTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS TCA 72 bp GGAGCAACCCAGTCTGGCCTGGACTCAGTTCCCTCTTaGAAAGCAAAGATCCTGCGTGTCCGTTTCAGTGGC +
Preference number: 6 (lower is better)
Translates to: GATQSGLDSVPS*KAKILRVRFSG
Trigger: GCCACTGAAACGGACACGCAGGATCTTTGCTTTTCAAGAGGGAACTGAGTCCAGGCCAGACTGGGTTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS TCA 72 bp GTCTCTTCCGGTCCTCCTGTTGGGCATCATCAAACGTaGAGCTCTGGGAGTGCTGCAGAGAGAACTCCTGGT +
Preference number: 6 (lower is better)
Translates to: VSSGPPVGHHQT*SSGSAAERTPG
Trigger: ACCAGGAGTTCTCTCTGCAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530889.1
CDS TCA 72 bp AATCTCCACGTACCAGTGTGGACAGTGTGGAAGCACTaGCCACATCTGTGCAGGAGAACCAGTGCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: NLHVPVWTVWKH*PHLCRRTSARA
Trigger: GGCTCTGGCACTGGTTCTCCTGCACAGATGTGGTCAGTGCTTCCACACTGTCCACACTGGTACGTGGAGATT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CCA 72 bp TCCTGGAGAGCTTGTCAAACATGGTCACCAGCTTCATaGCCTCGTGCTCCTTCTGCTCCTCTGTCATGCCCT +
Preference number: 6 (lower is better)
Translates to: SWRACQTWSPAS*PRAPSAPLSCP
Trigger: AGGGCATGACAGAGGAGCAGAAGGAGCACGAGGCCATGAAGCTGGTGACCATGTTTGACAAGCTCTCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325207.9
ENST00000526104.6
ENST00000526557.1
ENST00000527696.5
ENST00000529275.1
CDS CCA 72 bp GTCTCGCACATGGCATCCTGGAGAGCTTGTCAAACATaGTCACCAGCTTCATGGCCTCGTGCTCCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: VSHMASWRACQT*SPASWPRAPSA
Trigger: AGCAGAAGGAGCACGAGGCCATGAAGCTGGTGACCATGTTTGACAAGCTCTCCAGGATGCCATGTGCGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529275.1
CDS CCA 72 bp ACACACAGTGACGCCCCTCGAGCTCCACAGAACCGATaGGATGTAGAGGGGAAAGCCGAAGTGGAAAGGAAT +
Preference number: 6 (lower is better)
Translates to: THSDAPRAPQNR*DVEGKAEVERN
Trigger: ATTCCTTTCCACTTCGGCTTTCCCCTCTACATCCCATCGGTTCTGTGGAGCTCGAGGGGCGTCACTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS CCA 72 bp CTTCTCATGGAGGAAGGGTCTGGCTTCTTGCCAGGCTaGACCACAGAACAACCGGAAGAGTCGCCCATATCA +
Preference number: 6 (lower is better)
Translates to: LLMEEGSGFLPG*TTEQPEESPIS
Trigger: TGATATGGGCGACTCTTCCGGTTGTTCTGTGGTCCAGCCTGGCAAGAAGCCAGACCCTTCCTCCATGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CCA 72 bp TGTACTCCAGCCTGCTTTCTGCAAGCTCCTGGAAGATaGTTAGAGCCCCAGCTGTCCAGATGCCCTGTAGTG +
Preference number: 6 (lower is better)
Translates to: CTPACFLQAPGR*LEPQLSRCPVV
Trigger: CACTACAGGGCATCTGGACAGCTGGGGCTCTAACCATCTTCCAGGAGCTTGCAGAAAGCAGGCTGGAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CCA 72 bp GAGTGGAGACCCGAGGGTGTGTTGGGGGTACACACCTaGCTTTGGCTTCCTTGTACTCATCTGTGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: EWRPEGVLGVHT*LWLPCTHLCLC
Trigger: ACACAGACACAGATGAGTACAAGGAAGCCAAAGCCAGGTGTGTACCCCCAACACACCCTCGGGTCTCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CCA 72 bp ACCTGGAGAGCTTGTCAAACATGGTCACCAGCTTCATaGCCTCGTGCTCCTTCTGCTCCTCTGTCATGCCCT +
Preference number: 6 (lower is better)
Translates to: TWRACQTWSPAS*PRAPSAPLSCP
Trigger: AGGGCATGACAGAGGAGCAGAAGGAGCACGAGGCCATGAAGCTGGTGACCATGTTTGACAAGCTCTCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CCA 72 bp CTCCTCATGCCACACACCTGGAGAGCTTGTCAAACATaGTCACCAGCTTCATGGCCTCGTGCTCCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: LLMPHTWRACQT*SPASWPRAPSA
Trigger: AGCAGAAGGAGCACGAGGCCATGAAGCTGGTGACCATGTTTGACAAGCTCTCCAGGTGTGTGGCATGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 72 bp AATTTTCAGTCCTGGGCCATTGGGTTCGTTAGGCGTTaGCTGGGGAATGCAGGCGAACGGGATTCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: NFQSWAIGFVRR*LGNAGERDSQV
Trigger: GACCTGGGAATCCCGTTCGCCTGCATTCCCCAGCAAACGCCTAACGAACCCAATGGCCCAGGACTGAAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS TCA 72 bp CCACCTTCCGGTCCTCCTGTTGGGCATCATCAAACGTaGAGCTCTGGGAGTGCTGCAGAGAGAACTAGTGAA +
Preference number: 6 (lower is better)
Translates to: PPSGPPVGHHQT*SSGSAAERTSE
Trigger: TTCACTAGTTCTCTCTGCAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGAGGACCGGAAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527696.5
CDS GCA 72 bp TCACAGGGCTGTGCTTCAAAAGAAGCAAAAGGCGACTaGTGGGCTGCAACGGGCTGTGAGGAAGTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: SQGCASKEAKGD*WAATGCEEVLF
Trigger: AAACAGCACTTCCTCACAGCCCGTTGCAGCCCAGCAGTCGCCTTTTGCTTCTTTTGAAGCACAGCCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS GCA 72 bp CTGTTGCCACTACCCAAGGCCCAGTTGGCACATTCCTaGCCCCAAATTCATGGCTATGTCCAGTCTCACTCA +
Preference number: 6 (lower is better)
Translates to: LLPLPKAQLAHS*PQIHGYVQSHS
Trigger: TGAGTGAGACTGGACATAGCCATGAATTTGGGGGCAGGAATGTGCCAACTGGGCCTTGGGTAGTGGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS GCA 72 bp TCTGTAGAGGATTCTCTGTCACTGGGGCTATGCCCCTaGCTAACTTGTGACTGGCACAGAGTTACACCTCCC +
Preference number: 6 (lower is better)
Translates to: SVEDSLSLGLCP*LTCDWHRVTPP
Trigger: GGGAGGTGTAACTCTGTGCCAGTCACAAGTTAGGCAGGGGCATAGCCCCAGTGACAGAGAATCCTCTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CCA 72 bp CTCCCGGTCACAGGGTTTATGCTGTTTCCCAGTGGGTaGAATGTGGGGAATGCATTAGTGACTCTCCAGGAC +
Preference number: 6 (lower is better)
Translates to: LPVTGFMLFPSG*NVGNALVTLQD
Trigger: GTCCTGGAGAGTCACTAATGCATTCCCCACATTCCACCCACTGGGAAACAGCATAAACCCTGTGACCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526557.1
ENST00000530149.1
CDS CCA 72 bp CAAGGCCCAGTTGGCACATTCCTGCCCCCAAATTCATaGCTATGTCCAGTCTCACTCACCCAGACAACGTCA +
Preference number: 6 (lower is better)
Translates to: QGPVGTFLPPNS*LCPVSLTQTTS
Trigger: TGACGTTGTCTGGGTGAGTGAGACTGGACATAGCCATGAATTTGGGGGCAGGAATGTGCCAACTGGGCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CCA 72 bp GGTTTATTGTACTCCAGCCTGCTTTCTGCAAGCTCCTaGAAGATGGTTAGAGCCCCAGCTGTCCAGATGCCC +
Preference number: 6 (lower is better)
Translates to: GLLYSSLLSASS*KMVRAPAVQMP
Trigger: GGGCATCTGGACAGCTGGGGCTCTAACCATCTTCCAGGAGCTTGCAGAAAGCAGGCTGGAGTACAATAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 72 bp AAGCCGAAGTGGAAAGGAATTTTCAGTCCTGGGCCATaGGGTTCGTTAGGCGTTTGCTGGGGAATGCAGGCG +
Preference number: 6 (lower is better)
Translates to: KPKWKGIFSPGP*GSLGVCWGMQA
Trigger: CGCCTGCATTCCCCAGCAAACGCCTAACGAACCCAATGGCCCAGGACTGAAAATTCCTTTCCACTTCGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS GCA 72 bp GCCTGGACTCAGTTCCCTCTTGAAAAGCAAAGATCCTaGGTGTCCGTTTCAGTGGCCGTCATGAGGATTCAG +
Preference number: 6 (lower is better)
Translates to: AWTQFPLEKQRS*VSVSVAVMRIQ
Trigger: CTGAATCCTCATGACGGCCACTGAAACGGACACGCAGGATCTTTGCTTTTCAAGAGGGAACTGAGTCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526104.6
CDS GCA 72 bp GTTTATGCTGTTTCCCAGTGGGTGGAATGTGGGGAATaGATTAGTGACTCTCCAGGACAGGAGGCAAGCCAC +
Preference number: 6 (lower is better)
Translates to: VYAVSQWVECGE*ISDSPGQEASH
Trigger: GTGGCTTGCCTCCTGTCCTGGAGAGTCACTAATGCATTCCCCACATTCCACCCACTGGGAAACAGCATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526557.1
ENST00000530149.1
CDS GCA 72 bp TCCTGTTGGGCATCATCAAACGTGAAGCTCTGGGAGTaGTGCAGAGAGAACTCCTGGTTGTATGACCGCAGA +
Preference number: 6 (lower is better)
Translates to: SCWASSNVKLWE*CRENSWLYDRR
Trigger: TCTGCGGTCATACAACCAGGAGTTCTCTCTGCAGCACTCCCAGAGCTTCACGTTTGATGATGCCCAACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530889.1
CDS CCA 72 bp AGAAACGAGAACCGAATCCCCGCTCTGTGTACTTCGTaGACAGAGCAGGGAGTTCTTGACCCTCCTAGCATA +
Preference number: 6 (lower is better)
Translates to: RNENRIPALCTS*TEQGVLDPPSI
Trigger: TATGCTAGGAGGGTCAAGAACTCCCTGCTCTGTCCACGAAGTACACAGAGCGGGGATTCGGTTCTCGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 90 bp TGTGCCCTAGTAAGTACCATACTGTTGCCACTACCCAAGGCCCAGTaGGCACATTCCTGCCCCCAAATTCATGGCTATGTCCAGTCTCAC +
Preference number: 6 (lower is better)
Translates to: CALVSTILLPLPKAQ*AHSCPQIHGYVQSH
Trigger: GTGAGACTGGACATAGCCATGAATTTGGGGGCAGGAATGTGCCAACTGGGCCTTGGGTAGTGGCAACAGTATGGTACTTACTAGGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 90 bp AGTCAGCAGAAGGCCAAGAGTGGGTGGTGGGTGTCTGTGTCACTTTaGAAAAGGACAGGGATAGAGCGTAACTCAGAGGTACTCGTAAGC +
Preference number: 6 (lower is better)
Translates to: SQQKAKSGWWVSVSL*KRTGIERNSEVLVS
Trigger: GCTTACGAGTACCTCTGAGTTACGCTCTATCCCTGTCCTTTTCAAAAGTGACACAGACACCCACCACCCACTCTTGGCCTTCTGCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS TCA 72 bp CCCAGCCTACCTTGTGCAAACGCTTCTCTAGGAAGATaGGGAGGGCACGAATCACATCCATATTCACTCCCA +
Preference number: 6 (lower is better)
Translates to: PSLPCANASLGR*GGHESHPYSLP
Trigger: TGGGAGTGAATATGGATGTGATTCGTGCCCTCCTCATCTTCCTAGAGAAGCGTTTGCACAAGGTAGGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS GCA 72 bp GAAGTGAAACCTTCAAGTGTGTGGAAGGTGTCCACATaGTTCTCATGGAGGAAGGGTCTGGCTTCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: EVKPSSVWKVST*FSWRKGLASCQ
Trigger: CTGGCAAGAAGCCAGACCCTTCCTCCATGAGAAGCATGTGGACACCTTCCACACACTTGAAGGTTTCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 72 bp GTAAGTACCATACTGTTGCCACTACCCAAGGCCCAGTaGGCACATTCCTGCCCCCAAATTCATGGCTATGTC +
Preference number: 6 (lower is better)
Translates to: VSTILLPLPKAQ*AHSCPQIHGYV
Trigger: GACATAGCCATGAATTTGGGGGCAGGAATGTGCCAACTGGGCCTTGGGTAGTGGCAACAGTATGGTACTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 72 bp ACAAGGAACCAATGTGCCCTAGTAAGTACCATACTGTaGCCACTACCCAAGGCCCAGTTGGCACATTCCTGC +
Preference number: 6 (lower is better)
Translates to: TRNQCALVSTIL*PLPKAQLAHSC
Trigger: GCAGGAATGTGCCAACTGGGCCTTGGGTAGTGGCAACAGTATGGTACTTACTAGGGCACATTGGTTCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 90 bp ATCTGCCACCTTCTGGTATCCCAGATAGCACTTAGGAACAGGTGCTaGATTCTGGAAGCTCTTGCCCATTTGTCATCCTGTCCCACCCTA +
Preference number: 6 (lower is better)
Translates to: ICHLLVSQIALRNRC*ILEALAHLSSCPTL
Trigger: TAGGGTGGGACAGGATGACAAATGGGCAAGAGCTTCCAGAATCAAGCACCTGTTCCTAAGTGCTATCTGGGATACCAGAAGGTGGCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526557.1
ENST00000530149.1
CDS TCA 72 bp GCCTGTGTGTCTTGTGCAAACGCTTCTCTAGGAAGATaGGGAGGGCACGAATCACATCCATATTCACTCCCA +
Preference number: 6 (lower is better)
Translates to: ACVSCANASLGR*GGHESHPYSLP
Trigger: TGGGAGTGAATATGGATGTGATTCGTGCCCTCCTCATCTTCCTAGAGAAGCGTTTGCACAAGACACACAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325207.9
ENST00000526104.6
ENST00000527039.1
ENST00000527696.5
ENST00000527728.1
CDS GCA 72 bp GTAGGGGTTTCAACAGGGCTAATCCCTGAGCACAGGTaGAATCTTTGTGACTCCGCTGAACCACACATTACA +
Preference number: 6 (lower is better)
Translates to: VGVSTGLIPEHR*NLCDSAEPHIT
Trigger: TGTAATGTGTGGTTCAGCGGAGTCACAAAGATTGCACCTGTGCTCAGGGATTAGCCCTGTTGAAACCCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 72 bp AAGGCCAAGAGTGGGTGGTGGGTGTCTGTGTCACTTTaGAAAAGGACAGGGATAGAGCGTAACTCAGAGGTA +
Preference number: 6 (lower is better)
Translates to: KAKSGWWVSVSL*KRTGIERNSEV
Trigger: TACCTCTGAGTTACGCTCTATCCCTGTCCTTTTCAAAAGTGACACAGACACCCACCACCCACTCTTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS GCA 72 bp CACCTTCTGGTATCCCAGATAGCACTTAGGAACAGGTaGTTGATTCTGGAAGCTCTTGCCCATTTGTCATCC +
Preference number: 6 (lower is better)
Translates to: HLLVSQIALRNR*LILEALAHLSS
Trigger: GGATGACAAATGGGCAAGAGCTTCCAGAATCAAGCACCTGTTCCTAAGTGCTATCTGGGATACCAGAAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526557.1
ENST00000530149.1
CDS CAA 72 bp GGTAGATTCCCAGGAGGTCTACTAAATCTCGGTTTATaGTACTCCAGCCTGCTTTCTGCAAGCTCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: GRFPGGLLNLGL*YSSLLSASSWK
Trigger: CTTCCAGGAGCTTGCAGAAAGCAGGCTGGAGTACAATAAACCGAGATTTAGTAGACCTCCTGGGAATCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530149.1
CDS CAA 72 bp CTTCTGGTATCCCAGATAGCACTTAGGAACAGGTGCTaGATTCTGGAAGCTCTTGCCCATTTGTCATCCTGT +
Preference number: 6 (lower is better)
Translates to: LLVSQIALRNRC*ILEALAHLSSC
Trigger: ACAGGATGACAAATGGGCAAGAGCTTCCAGAATCAAGCACCTGTTCCTAAGTGCTATCTGGGATACCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526557.1
ENST00000530149.1
CDS CAA 90 bp AAAGCAATTAAAGCTTTAGACTCGCACACACATTGCCCTCAGATGTaGGTGGCAAAAAGAAACGAGAACCGAATCCCCGCTCTGTGTACT +
Preference number: 6 (lower is better)
Translates to: KAIKALDSHTHCPQM*VAKRNENRIPALCT
Trigger: AGTACACAGAGCGGGGATTCGGTTCTCGTTTCTTTTTGCCACCAACATCTGAGGGCAATGTGTGTGCGAGTCTAAAGCTTTAATTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530149.1