RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIC3-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000246820

Ensembl transcript IDs: ENST00000499752.2

Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp ACAGATCCCAGACCTGCATGGCCTCTGCTCTGCCTGTCAGGAAACTaGGTTGTGGCCGCTACCAGCCACAGGAACGTCCCACCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: TDPRPAWPLLCLSGN*VVAATSHRNVPPLL
Trigger: CAGCAGAGGTGGGACGTTCCTGTGGCTGGTAGCGGCCACAACGCAGTTTCCTGACAGGCAGAGCAGAGGCCATGCAGGTCTGGGATCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 90 bp AGAACTGGCCTCGTAAGGAAGCTCCAGTGCCACAGATCCCAGACCTaGATGGCCTCTGCTCTGCCTGTCAGGAAACTGCGTTGTGGCCGC +
Preference number: 5 (lower is better)
Translates to: RTGLVRKLQCHRSQT*MASALPVRKLRCGR
Trigger: GCGGCCACAACGCAGTTTCCTGACAGGCAGAGCAGAGGCCATGCAGGTCTGGGATCTGTGGCACTGGAGCTTCCTTACGAGGCCAGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 90 bp CTCCCAGAACCACACCACAGAACTGGCCTCGTAAGGAAGCTCCAGTaGCACAGATCCCAGACCTGCATGGCCTCTGCTCTGCCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: LPEPHHRTGLVRKLQ*HRSQTCMASALPVR
Trigger: CCTGACAGGCAGAGCAGAGGCCATGCAGGTCTGGGATCTGTGGCACTGGAGCTTCCTTACGAGGCCAGTTCTGTGGTGTGGTTCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CCA 90 bp CTCTCTGCTCTGCGTCTTTCAGGGGCAGAGGCCAGTGAGGAGAGTTaGCAGGAAAGCAGTAAGGACATTCTCACCTTGACCACTCACCAC +
Preference number: 5 (lower is better)
Translates to: LSALRLSGAEASEES*QESSKDILTLTTHH
Trigger: GTGGTGAGTGGTCAAGGTGAGAATGTCCTTACTGCTTTCCTGCCAACTCTCCTCACTGGCCTCTGCCCCTGAAAGACGCAGAGCAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS TCA 90 bp ATGGAGCTGCTTCTTCTCCAGCTGCAGCAAGCCCAGCGAGGGACCTaGTCTATCAGGCTTAGATCACATGCCTGCTGTGGATCAGTCACA +
Preference number: 5 (lower is better)
Translates to: MELLLLQLQQAQRGT*SIRLRSHACCGSVT
Trigger: TGTGACTGATCCACAGCAGGCATGTGATCTAAGCCTGATAGATCAGGTCCCTCGCTGGGCTTGCTGCAGCTGGAGAAGAAGCAGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 90 bp AGGCAGTTGGCTCATGTGATTTTAGAAGGTGGCAAATCCAGACTCTaGAAGGTGGGCCAACAGGCTGGAGACCCCGGAAGGACAGATGCT +
Preference number: 5 (lower is better)
Translates to: RQLAHVILEGGKSRL*KVGQQAGDPGRTDA
Trigger: AGCATCTGTCCTTCCGGGGTCTCCAGCCTGTTGGCCCACCTTGCAGAGTCTGGATTTGCCACCTTCTAAAATCACATGAGCCAACTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 90 bp CCTTTGAGCGGCAGCAGCTGTTGCTGTTTTTGTCTCACACGTGATTaGCTTCCAGCCTCCATCACATTTGCTAGCTCAGTGGGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: PLSGSSCCCFCLTRD*LPASITFASSVGGR
Trigger: CCTCCCTCCCACTGAGCTAGCAAATGTGATGGAGGCTGGAAGGCAATCACGTGTGAGACAAAAACAGCAACAGCTGCTGCCGCTCAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 90 bp CTGCAAGGTGGGCCAACAGGCTGGAGACCCCGGAAGGACAGATGCTaGAGTTCAAATCCAAAGTTCGGTTGGCTACAGAATTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LQGGPTGWRPRKDRC*SSNPKFGWLQNCFL
Trigger: CAAGAAGCAATTCTGTAGCCAACCGAACTTTGGATTTGAACTGCAGCATCTGTCCTTCCGGGGTCTCCAGCCTGTTGGCCCACCTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 90 bp ACTCTGCAAGGTGGGCCAACAGGCTGGAGACCCCGGAAGGACAGATaGTGCAGTTCAAATCCAAAGTTCGGTTGGCTACAGAATTGCTTC +
Preference number: 5 (lower is better)
Translates to: TLQGGPTGWRPRKDR*CSSNPKFGWLQNCF
Trigger: GAAGCAATTCTGTAGCCAACCGAACTTTGGATTTGAACTGCAGCATCTGTCCTTCCGGGGTCTCCAGCCTGTTGGCCCACCTTGCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CCA 90 bp TTTAGAAGGTGGCAAATCCAGACTCTGCAAGGTGGGCCAACAGGCTaGAGACCCCGGAAGGACAGATGCTGCAGTTCAAATCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: FRRWQIQTLQGGPTG*RPRKDRCCSSNPKF
Trigger: GAACTTTGGATTTGAACTGCAGCATCTGTCCTTCCGGGGTCTCCAGCCTGTTGGCCCACCTTGCAGAGTCTGGATTTGCCACCTTCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CCA 90 bp CCTGGTCTGGAGGGTAAAGCACACTGGATAAGACTTAGGAGACCATaGAGTCTCTTGAAAACTAGGCTATTGCCTCTGGGCTCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: PGLEGKAHWIRLRRP*SLLKTRLLPLGSVS
Trigger: GGAAACAGAGCCCAGAGGCAATAGCCTAGTTTTCAAGAGACTCCATGGTCTCCTAAGTCTTATCCAGTGTGCTTTACCCTCCAGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 90 bp AACCTCTTCATTCTAAACTTTGGAGTTACAGGCCTTGCTCCCTTCTaGTCAGTGTTTTGGGCACCTGGGTCTCATTTTCCTGCTAACCAC +
Preference number: 5 (lower is better)
Translates to: NLFILNFGVTGLAPF*SVFWAPGSHFPANH
Trigger: GTGGTTAGCAGGAAAATGAGACCCAGGTGCCCAAAACACTGAGCAGAAGGGAGCAAGGCCTGTAACTCCAAAGTTTAGAATGAAGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS TCA 90 bp GTGTTTGAGAAACTAGCAGCCTCATACTTGAATAAGTATCTGCTGTaGACAAGTTCTGTGCTCAGTCATGCCATGGGAGGAGCACCCTAT +
Preference number: 5 (lower is better)
Translates to: VFEKLAASYLNKYLL*TSSVLSHAMGGAPY
Trigger: ATAGGGTGCTCCTCCCATGGCATGACTGAGCACAGAACTTGTTCACAGCAGATACTTATTCAAGTATGAGGCTGCTAGTTTCTCAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 90 bp CAGAAGACAAAGTACATTACACACATTTCACCTTTGGGGAAAGCTTaGAAATGTTTTGGCAGTGGCATGAATATTTATAGGCAAGAGTGT +
Preference number: 5 (lower is better)
Translates to: QKTKYITHISPLGKA*KCFGSGMNIYRQEC
Trigger: ACACTCTTGCCTATAAATATTCATGCCACTGCCAAAACATTTGCAAGCTTTCCCCAAAGGTGAAATGTGTGTAATGTACTTTGTCTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CCA 90 bp TGTCAAATGAAGAAAGGGTATTCAAAGATTGTGGATGTCTACTATTaGCAGGTGTTCATCATATTTCCCTTAACCCTGATCAAAATTCTA +
Preference number: 5 (lower is better)
Translates to: CQMKKGYSKIVDVYY*QVFIIFPLTLIKIL
Trigger: TAGAATTTTGATCAGGGTTAAGGGAAATATGATGAACACCTGCCAATAGTAGACATCCACAATCTTTGAATACCCTTTCTTCATTTGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CAA 72 bp CTGCATGGCCTCTGCTCTGCCTGTCAGGAAACTGCGTaGTGGCCGCTACCAGCCACAGGAACGTCCCACCTC +
Preference number: 6 (lower is better)
Translates to: LHGLCSACQETA*WPLPATGTSHL
Trigger: GAGGTGGGACGTTCCTGTGGCTGGTAGCGGCCACAACGCAGTTTCCTGACAGGCAGAGCAGAGGCCATGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 72 bp AGACCTGCATGGCCTCTGCTCTGCCTGTCAGGAAACTaGGTTGTGGCCGCTACCAGCCACAGGAACGTCCCA +
Preference number: 6 (lower is better)
Translates to: RPAWPLLCLSGN*VVAATSHRNVP
Trigger: TGGGACGTTCCTGTGGCTGGTAGCGGCCACAACGCAGTTTCCTGACAGGCAGAGCAGAGGCCATGCAGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 72 bp GCTCCAGTGCCACAGATCCCAGACCTGCATGGCCTCTaGTCTGCCTGTCAGGAAACTGCGTTGTGGCCGCTA +
Preference number: 6 (lower is better)
Translates to: APVPQIPDLHGL*SACQETALWPL
Trigger: TAGCGGCCACAACGCAGTTTCCTGACAGGCAGAGCAGAGGCCATGCAGGTCTGGGATCTGTGGCACTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 72 bp CCACACCACAGAACTGGCCTCGTAAGGAAGCTCCAGTaGCACAGATCCCAGACCTGCATGGCCTCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: PHHRTGLVRKLQ*HRSQTCMASAL
Trigger: CAGAGCAGAGGCCATGCAGGTCTGGGATCTGTGGCACTGGAGCTTCCTTACGAGGCCAGTTCTGTGGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 72 bp GGTGGGCCAACAGGCTGGAGACCCCGGAAGGACAGATaGTGCAGTTCAAATCCAAAGTTCGGTTGGCTACAG +
Preference number: 6 (lower is better)
Translates to: GGPTGWRPRKDR*CSSNPKFGWLQ
Trigger: CTGTAGCCAACCGAACTTTGGATTTGAACTGCAGCATCTGTCCTTCCGGGGTCTCCAGCCTGTTGGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS TCA 72 bp CTTCTTCTCCAGCTGCAGCAAGCCCAGCGAGGGACCTaGTCTATCAGGCTTAGATCACATGCCTGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: LLLQLQQAQRGT*SIRLRSHACCG
Trigger: TCCACAGCAGGCATGTGATCTAAGCCTGATAGATCAGGTCCCTCGCTGGGCTTGCTGCAGCTGGAGAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 72 bp GCTCATGTGATTTTAGAAGGTGGCAAATCCAGACTCTaGAAGGTGGGCCAACAGGCTGGAGACCCCGGAAGG +
Preference number: 6 (lower is better)
Translates to: AHVILEGGKSRL*KVGQQAGDPGR
Trigger: CCTTCCGGGGTCTCCAGCCTGTTGGCCCACCTTGCAGAGTCTGGATTTGCCACCTTCTAAAATCACATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 72 bp ATGCCCAAGGTAACCGACTGTGACTTCTCTCTGCTCTaGGTCTTTCAGGGGCAGAGGCCAGTGAGGAGAGTT +
Preference number: 6 (lower is better)
Translates to: MPKVTDCDFSLL*VFQGQRPVRRV
Trigger: AACTCTCCTCACTGGCCTCTGCCCCTGAAAGACGCAGAGCAGAGAGAAGTCACAGTCGGTTACCTTGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CCA 72 bp ATCTGCTGTGAACAAGTTCTGTGCTCAGTCATGCCATaGGAGGAGCACCCTATCCTCCCGGGACTCCCAACT +
Preference number: 6 (lower is better)
Translates to: ICCEQVLCSVMP*EEHPILPGLPT
Trigger: AGTTGGGAGTCCCGGGAGGATAGGGTGCTCCTCCCATGGCATGACTGAGCACAGAACTTGTTCACAGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CCA 72 bp CTGCGTCTTTCAGGGGCAGAGGCCAGTGAGGAGAGTTaGCAGGAAAGCAGTAAGGACATTCTCACCTTGACC +
Preference number: 6 (lower is better)
Translates to: LRLSGAEASEES*QESSKDILTLT
Trigger: GGTCAAGGTGAGAATGTCCTTACTGCTTTCCTGCCAACTCTCCTCACTGGCCTCTGCCCCTGAAAGACGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CCA 72 bp GAAGGGGCGGAAACCCCAAACGGGTGTCTCGGTGAGTaGGTTACAGCTGGAGCAAGTAGATCTCAATCCTAC +
Preference number: 6 (lower is better)
Translates to: EGAETPNGCLGE*VTAGASRSQSY
Trigger: GTAGGATTGAGATCTACTTGCTCCAGCTGTAACCCACTCACCGAGACACCCGTTTGGGGTTTCCGCCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 72 bp GGGCCAACAGGCTGGAGACCCCGGAAGGACAGATGCTaGAGTTCAAATCCAAAGTTCGGTTGGCTACAGAAT +
Preference number: 6 (lower is better)
Translates to: GPTGWRPRKDRC*SSNPKFGWLQN
Trigger: ATTCTGTAGCCAACCGAACTTTGGATTTGAACTGCAGCATCTGTCCTTCCGGGGTCTCCAGCCTGTTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CCA 72 bp CCCAGTAAGCAGGGAACTGGCAGACACAAACCTGCCTaGTTCTCCAGTTTTCACCAGCTTGATCCCCTGAAG +
Preference number: 6 (lower is better)
Translates to: PSKQGTGRHKPA*FSSFHQLDPLK
Trigger: CTTCAGGGGATCAAGCTGGTGAAAACTGGAGAACCAGGCAGGTTTGTGTCTGCCAGTTCCCTGCTTACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CCA 72 bp TTTCCTGCCTGTGGTAAGGTGTATGACTCTCCACAATaGGGACTCCACAGTGGAGAGAGGGAGAGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: FPACGKVYDSPQ*GLHSGERERER
Trigger: TCTCTCTCTCTCCCTCTCTCCACTGTGGAGTCCCCATTGTGGAGAGTCATACACCTTACCACAGGCAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CAA 90 bp GCTGTTTTTGTCTCACACGTGATTGCCTTCCAGCCTCCATCACATTaGCTAGCTCAGTGGGAGGGAGGCAGAACAGTCTCCATTTCACAG +
Preference number: 6 (lower is better)
Translates to: AVFVSHVIAFQPPSH*LAQWEGGRTVSISQ
Trigger: CTGTGAAATGGAGACTGTTCTGCCTCCCTCCCACTGAGCTAGCAAATGTGATGGAGGCTGGAAGGCAATCACGTGTGAGACAAAAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CAA 90 bp GCCAGTGAGGAGAGTTGGCAGGAAAGCAGTAAGGACATTCTCACCTaGACCACTCACCACCAAGAAACTTCTATCCTCGTACCCCTAACC +
Preference number: 6 (lower is better)
Translates to: ASEESWQESSKDILT*TTHHQETSILVPLT
Trigger: GGTTAGGGGTACGAGGATAGAAGTTTCTTGGTGGTGAGTGGTCAAGGTGAGAATGTCCTTACTGCTTTCCTGCCAACTCTCCTCACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS GCA 72 bp CTTTCTTCAGACTTGCCTTTGAGCGGCAGCAGCTGTTaGTGTTTTTGTCTCACACGTGATTGCCTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: LSSDLPLSGSSC*CFCLTRDCLPA
Trigger: GGCTGGAAGGCAATCACGTGTGAGACAAAAACAGCAACAGCTGCTGCCGCTCAAAGGCAAGTCTGAAGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CAA 90 bp GAGGGTAAAGCACACTGGATAAGACTTAGGAGACCATGGAGTCTCTaGAAAACTAGGCTATTGCCTCTGGGCTCTGTTTCCCTTGCAGGG +
Preference number: 6 (lower is better)
Translates to: EGKAHWIRLRRPWSL*KTRLLPLGSVSLAG
Trigger: CCCTGCAAGGGAAACAGAGCCCAGAGGCAATAGCCTAGTTTTCAAGAGACTCCATGGTCTCCTAAGTCTTATCCAGTGTGCTTTACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CAA 72 bp GAAGGACAGATGCTGCAGTTCAAATCCAAAGTTCGGTaGGCTACAGAATTGCTTCTTGCCAGGGCGAACTGG +
Preference number: 6 (lower is better)
Translates to: EGQMLQFKSKVR*ATELLLARANW
Trigger: CCAGTTCGCCCTGGCAAGAAGCAATTCTGTAGCCAACCGAACTTTGGATTTGAACTGCAGCATCTGTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS TCA 72 bp AAAGAATGTGTGGAGCACCACTCAGAATTGAGCCCCTaGAGAACAAGGAAGCTGAGGTGTTTATCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: KECVEHHSELSP*RTRKLRCLSAS
Trigger: GCTGGCAGATAAACACCTCAGCTTCCTTGTTCTTCAGGGGCTCAATTCTGAGTGGTGCTCCACACATTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CCA 72 bp GAGGGTAAAGCACACTGGATAAGACTTAGGAGACCATaGAGTCTCTTGAAAACTAGGCTATTGCCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: EGKAHWIRLRRP*SLLKTRLLPLG
Trigger: GCCCAGAGGCAATAGCCTAGTTTTCAAGAGACTCCATGGTCTCCTAAGTCTTATCCAGTGTGCTTTACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CCA 72 bp AAGGACAGATGCTGCAGTTCAAATCCAAAGTTCGGTTaGCTACAGAATTGCTTCTTGCCAGGGCGAACTGGT +
Preference number: 6 (lower is better)
Translates to: KDRCCSSNPKFG*LQNCFLPGRTG
Trigger: ACCAGTTCGCCCTGGCAAGAAGCAATTCTGTAGCCAACCGAACTTTGGATTTGAACTGCAGCATCTGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CAA 72 bp AAGCTGAGGTGTTTATCTGCCAGCTCCTCTCCTTCATaGTTTAAGAGTTGCTCTGGGAGTGGTAACTCTCCC +
Preference number: 6 (lower is better)
Translates to: KLRCLSASSSPS*FKSCSGSGNSP
Trigger: GGGAGAGTTACCACTCCCAGAGCAACTCTTAAACAATGAAGGAGAGGAGCTGGCAGATAAACACCTCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CAA 90 bp CTTTTTGAAATGAGACTCTCTGGGGTGTTTCTTCAAGGCAACTCATaGCTGATTCCTGGAGAGAGGTCTAGTTGCTCAGAGCAGTGGCAG +
Preference number: 6 (lower is better)
Translates to: LFEMRLSGVFLQGNS*LIPGERSSCSEQWQ
Trigger: CTGCCACTGCTCTGAGCAACTAGACCTCTCTCCAGGAATCAGCAATGAGTTGCCTTGAAGAAACACCCCAGAGAGTCTCATTTCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS TCA 72 bp AGAGTTGGCAGGAAAGCAGTAAGGACATTCTCACCTTaGCCACTCACCACCAAGAAACTTCTATCCTCGTAC +
Preference number: 6 (lower is better)
Translates to: RVGRKAVRTFSP*PLTTKKLLSSY
Trigger: GTACGAGGATAGAAGTTTCTTGGTGGTGAGTGGTCAAGGTGAGAATGTCCTTACTGCTTTCCTGCCAACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CAA 72 bp GAGAGTTGGCAGGAAAGCAGTAAGGACATTCTCACCTaGACCACTCACCACCAAGAAACTTCTATCCTCGTA +
Preference number: 6 (lower is better)
Translates to: ESWQESSKDILT*TTHHQETSILV
Trigger: TACGAGGATAGAAGTTTCTTGGTGGTGAGTGGTCAAGGTGAGAATGTCCTTACTGCTTTCCTGCCAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS TCA 72 bp AAACTAGCAGCCTCATACTTGAATAAGTATCTGCTGTaGACAAGTTCTGTGCTCAGTCATGCCATGGGAGGA +
Preference number: 6 (lower is better)
Translates to: KLAASYLNKYLL*TSSVLSHAMGG
Trigger: TCCTCCCATGGCATGACTGAGCACAGAACTTGTTCACAGCAGATACTTATTCAAGTATGAGGCTGCTAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CCA 72 bp AGAAGGCAACCACTTCATGTCCGTTTTCTTCCTTCTTaGTCTTCTTCCTCTTTCCTCTATTTTCTTCCCACC +
Preference number: 6 (lower is better)
Translates to: RRQPLHVRFLPS*SSSSFLYFLPT
Trigger: GGTGGGAAGAAAATAGAGGAAAGAGGAAGAAGACCAAGAAGGAAGAAAACGGACATGAAGTGGTTGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CAA 72 bp GAGAGAGGGAGAGAGAGAGAGATTTACTTTAGGCAGTaGGCTCATGTGATTTTAGAAGGTGGCAAATCCAGA +
Preference number: 6 (lower is better)
Translates to: ERGREREIYFRQ*AHVILEGGKSR
Trigger: TCTGGATTTGCCACCTTCTAAAATCACATGAGCCAACTGCCTAAAGTAAATCTCTCTCTCTCTCCCTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS TCA 72 bp CAGTCACTTCAGGGACAAATTTGGTGGCAAAGTCAGTaGCTTTTTGAAATGAGACTCTCTGGGGTGTTTCTT +
Preference number: 6 (lower is better)
Translates to: QSLQGQIWWQSQ*LFEMRLSGVFL
Trigger: AAGAAACACCCCAGAGAGTCTCATTTCAAAAAGTCACTGACTTTGCCACCAAATTTGTCCCTGAAGTGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CAA 72 bp AAGAAGGCAACCACTTCATGTCCGTTTTCTTCCTTCTaGGTCTTCTTCCTCTTTCCTCTATTTTCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: KKATTSCPFSSF*VFFLFPLFSSH
Trigger: GTGGGAAGAAAATAGAGGAAAGAGGAAGAAGACCAAGAAGGAAGAAAACGGACATGAAGTGGTTGCCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS TCA 72 bp GAGAGGCCAGGAAATGTAGTTTGTTGGATTCTACATTaGGAACCTGAGACTCTCAATGTGGATAATGTCAAA +
Preference number: 6 (lower is better)
Translates to: ERPGNVVCWILH*EPETLNVDNVK
Trigger: TTTGACATTATCCACATTGAGAGTCTCAGGTTCTCAATGTAGAATCCAACAAACTACATTTCCTGGCCTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CCA 72 bp AAGAAAGGGTATTCAAAGATTGTGGATGTCTACTATTaGCAGGTGTTCATCATATTTCCCTTAACCCTGATC +
Preference number: 6 (lower is better)
Translates to: KKGYSKIVDVYY*QVFIIFPLTLI
Trigger: GATCAGGGTTAAGGGAAATATGATGAACACCTGCCAATAGTAGACATCCACAATCTTTGAATACCCTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS CAA 90 bp ATGTCAAATGAAGAAAGGGTATTCAAAGATTGTGGATGTCTACTATaGGCAGGTGTTCATCATATTTCCCTTAACCCTGATCAAAATTCT +
Preference number: 6 (lower is better)
Translates to: MSNEERVFKDCGCLL*AGVHHISLNPDQNS
Trigger: AGAATTTTGATCAGGGTTAAGGGAAATATGATGAACACCTGCCAATAGTAGACATCCACAATCTTTGAATACCCTTTCTTCATTTGACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2
CDS TCA 72 bp GAAAATGTAGTGCAGAGATTGTGGATATGCAAAGTGTaGCTTAAGCAGGGAATTTCTATCAGTTTGCTTAAT +
Preference number: 6 (lower is better)
Translates to: ENVVQRLWICKV*LKQGISISLLN
Trigger: ATTAAGCAAACTGATAGAAATTCCCTGCTTAAGTCACACTTTGCATATCCACAATCTCTGCACTACATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499752.2