RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000166405

Ensembl transcript IDs: ENST00000309737.11, ENST00000335425.7, ENST00000343202.8, ENST00000419822.2, ENST00000425599.6, ENST00000526962.1, ENST00000528463.5, ENST00000530060.5, ENST00000531450.1

Found 742 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCACCTCCACCTGATCCTTTGGCCTTTGCAAATGCCTCGGCAAGGTaGGACCTCTGGAAACGAGCCCCAGGAGTCTGGCCATCTGAGGGT +
Preference number: 1 (lower is better)
Translates to: APPPDPLAFANASAR*DLWKRAPGVWPSEG
Trigger: ACCCTCAGATGGCCAGACTCCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528463.5
3UTR CCA 90 bp GAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTaGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCT +
Preference number: 1 (lower is better)
Translates to: EPSYRVAASSWQDHP*AGLPAASMASSLDS
Trigger: AGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR TCA 90 bp TCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCTaGGGCAGCATCAATGTTCCTAGGAAGACCCTCGCTGCGAGGAAG +
Preference number: 1 (lower is better)
Translates to: SDQWESSLLWRKEDV*GSINVPRKTLAARK
Trigger: CTTCCTCGCAGCGAGGGTCTTCCTAGGAACATTGATGCTGCCTCAGACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR GCA 90 bp GGACCACTCTTCTTTGGTGGTTTCCTCTTGCTCAGGGTAGCTATCTaGACTGAATCCAGCATTCTCTGCCAAGACAGCAGGATCCTCGTC +
Preference number: 1 (lower is better)
Translates to: GPLFFGGFLLLRVAI*TESSILCQDSRILV
Trigger: GACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
3UTR TCA 90 bp CCTGTTGTGACCAGGAAAGGGGATCTCCTGGCTGCACCACCCACCTaGTTTACCAAGAGTGATCCCAGATTATGCAGTTGTTTTGTGAGC +
Preference number: 1 (lower is better)
Translates to: PVVTRKGDLLAAPPT*FTKSDPRLCSCFVS
Trigger: GCTCACAAAACAACTGCATAATCTGGGATCACTCTTGGTAAATCAGGTGGGTGGTGCAGCCAGGAGATCCCCTTTCCTGGTCACAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR TCA 90 bp GCAGGGCAGGGTCTAAAGTCTCTATCTAAAGCTTCCTCTGTCCACTaGAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGT +
Preference number: 1 (lower is better)
Translates to: AGQGLKSLSKASSVH*KPGVQRYFWAWQFC
Trigger: ACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAGTGGACAGAGGAAGCTTTAGATAGAGACTTTAGACCCTGCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR TCA 90 bp TCTGGAGCTAGTCATGGAGATAATGGTTTCTTTGTGCTCCTGTTGTaGCCAGGAAAGGGGATCTCCTGGCTGCACCACCCACCTGATTTA +
Preference number: 1 (lower is better)
Translates to: SGASHGDNGFFVLLL*PGKGISWLHHPPDL
Trigger: TAAATCAGGTGGGTGGTGCAGCCAGGAGATCCCCTTTCCTGGTCACAACAGGAGCACAAAGAAACCATTATCTCCATGACTAGCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR TCA 90 bp TCACCCAAGCCATATAAGGTGCATTGTATGGTTCTCAAAGGCCGTTaGTTCTACAGGCCAAATACACCTCCACTCCTCATCACGACTCCC +
Preference number: 1 (lower is better)
Translates to: SPKPYKVHCMVLKGR*FYRPNTPPLLITTP
Trigger: GGGAGTCGTGATGAGGAGTGGAGGTGTATTTGGCCTGTAGAATCAACGGCCTTTGAGAACCATACAATGCACCTTATATGGCTTGGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR TCA 90 bp ACTCTTCTTTGGTGGTTTCCTCTTGCTCAGGGTAGCTATCTGCACTaGATCCAGCATTCTCTGCCAAGACAGCAGGATCCTCGTCTTCAT +
Preference number: 1 (lower is better)
Translates to: TLLWWFPLAQGSYLH*IQHSLPRQQDPRLH
Trigger: ATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAGAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
3UTR GCA 90 bp TTCCTCTTGCTCAGGGTAGCTATCTGCACTGAATCCAGCATTCTCTaGCAAGACAGCAGGATCCTCGTCTTCATGAAAACAGCAGGAACA +
Preference number: 1 (lower is better)
Translates to: FLLLRVAICTESSIL*QDSRILVFMKTAGT
Trigger: TGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
3UTR CCA 90 bp AGGGCACAGGGCCAAGAAGGAAATCTGAGGAGAGAGAGGTCACCTTaGGACTTGAGTAATGGATACTTCAGACTGGCTGTTTTCACTCTA +
Preference number: 1 (lower is better)
Translates to: RAQGQEGNLRRERSP*DLSNGYFRLAVFTL
Trigger: TAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCAAGGTGACCTCTCTCTCCTCAGATTTCCTTCTTGGCCCTGTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR TCA 90 bp TCAACAACTCTTTCTGCCAAGAGTGTCCTCTCTTCTTTGCCTACCTaGAGAAGTTCTTTGCATGCCTCAAGGCCCACCTCCCAAGAAACT +
Preference number: 1 (lower is better)
Translates to: STTLSAKSVLSSLPT*RSSLHASRPTSQET
Trigger: AGTTTCTTGGGAGGTGGGCCTTGAGGCATGCAAAGAACTTCTTCAGGTAGGCAAAGAAGAGAGGACACTCTTGGCAGAAAGAGTTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR TCA 90 bp CTGAATCCAGCATTCTCTGCCAAGACAGCAGGATCCTCGTCTTCATaGAAACAGCAGGAACATGTTTCTGGCTTTGGATCACACGAGGTA +
Preference number: 1 (lower is better)
Translates to: LNPAFSAKTAGSSSS*KQQEHVSGFGSHEV
Trigger: TACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
3UTR GCA 90 bp CCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTaGTATATTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTT +
Preference number: 1 (lower is better)
Translates to: PKYPSMEHMVSTPGH*YIGSLQQTYSNFPL
Trigger: AAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR GCA 90 bp CAAGAGTGTCCTCTCTTCTTTGCCTACCTGAAGAAGTTCTTTGCATaGCTCAAGGCCCACCTCCCAAGAAACTGTGAAGTTTCTTGGCAA +
Preference number: 1 (lower is better)
Translates to: QECPLFFAYLKKFFA*LKAHLPRNCEVSWQ
Trigger: TTGCCAAGAAACTTCACAGTTTCTTGGGAGGTGGGCCTTGAGGCATGCAAAGAACTTCTTCAGGTAGGCAAAGAAGAGAGGACACTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR GCA 90 bp GGATGTGTGGCACCCTATGGGCATTCTTACAGACTCAACTCAGACTaGCTGCAGAATTCCTGGGCGAGAAAGAACTCATCTTATTTAAGC +
Preference number: 1 (lower is better)
Translates to: GCVAPYGHSYRLNSD*LQNSWARKNSSYLS
Trigger: GCTTAAATAAGATGAGTTCTTTCTCGCCCAGGAATTCTGCAGGCAGTCTGAGTTGAGTCTGTAAGAATGCCCATAGGGTGCCACACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR CCA 90 bp ATCTTCCTTGCTCATGCTCATCTAAAAGGGATGTGTGGCACCCTATaGGCATTCTTACAGACTCAACTCAGACTGCCTGCAGAATTCCTG +
Preference number: 1 (lower is better)
Translates to: IFLAHAHLKGMCGTL*AFLQTQLRLPAEFL
Trigger: CAGGAATTCTGCAGGCAGTCTGAGTTGAGTCTGTAAGAATGCCCATAGGGTGCCACACATCCCTTTTAGATGAGCATGAGCAAGGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR TCA 90 bp GACAGATTATGGCTCATGTTTCTCTGCCTGCAGGATTCACGATCCTaGGCCCTCTTACAGGGTCATAGTTCATTTTATCTGTCAGGCTCT +
Preference number: 1 (lower is better)
Translates to: DRLWLMFLCLQDSRS*ALLQGHSSFYLSGS
Trigger: AGAGCCTGACAGATAAAATGAACTATGACCCTGTAAGAGGGCTCAGGATCGTGAATCCTGCAGGCAGAGAAACATGAGCCATAATCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR TCA 90 bp GAAAGGGGATCTCCTGGCTGCACCACCCACCTGATTTACCAAGAGTaGTCCCAGATTATGCAGTTGTTTTGTGAGCTAACTGTCCATAAA +
Preference number: 1 (lower is better)
Translates to: ERGSPGCTTHLIYQE*SQIMQLFCELTVHK
Trigger: TTTATGGACAGTTAGCTCACAAAACAACTGCATAATCTGGGATCACTCTTGGTAAATCAGGTGGGTGGTGCAGCCAGGAGATCCCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR CCA 90 bp GACAGCAGGATCCTCGTCTTCATGAAAACAGCAGGAACATGTTTCTaGCTTTGGATCACACGAGGTAACAGAATTATCTTCCTGGGCTCT +
Preference number: 1 (lower is better)
Translates to: DSRILVFMKTAGTCF*LWITRGNRIIFLGS
Trigger: AGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
3UTR TCA 90 bp CCTGTGTTCACACTAATGTCCGTGTTTTACAAGGTGACAGGTGTGTaGGCACCAGGAAGGATACATGATATCCATGATAGTGGCCTGATA +
Preference number: 1 (lower is better)
Translates to: PVFTLMSVFYKVTGV*APGRIHDIHDSGLI
Trigger: TATCAGGCCACTATCATGGATATCATGTATCCTTCCTGGTGCTCACACACCTGTCACCTTGTAAAACACGGACATTAGTGTGAACACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTaGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAACTT +
Preference number: 1 (lower is better)
Translates to: KKTQISEYGTHGLYP*ALLYWFSATDILQL
Trigger: AAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR TCA 90 bp AGGGTAATCCACCAAGATTGTTTCTTGCCTACGCTTGATACAGTCTaGAAGGTCATAAATTGGGTAAGTCTCTTCAGGGTAACCTTCCCA +
Preference number: 1 (lower is better)
Translates to: RVIHQDCFLPTLDTV*KVINWVSLFRVTFP
Trigger: TGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
3UTR TCA 90 bp CTTTTGGGTCAGGGTAATCCACCAAGATTGTTTCTTGCCTACGCTTaGTACAGTCTGAAAGGTCATAAATTGGGTAAGTCTCTTCAGGGT +
Preference number: 1 (lower is better)
Translates to: LLGQGNPPRLFLAYA*YSLKGHKLGKSLQG
Trigger: ACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
3UTR GCA 90 bp TGTAATTCATGGGTGCTATCTTGTCTCAAGAAGACACACGTCAGATaGAGTAAGGAGAAAAGGCCTTTAGTTTGGTCAAAATCCTCCCAG +
Preference number: 1 (lower is better)
Translates to: CNSWVLSCLKKTHVR*SKEKRPLVWSKSSQ
Trigger: CTGGGAGGATTTTGACCAAACTAAAGGCCTTTTCTCCTTACTGCATCTGACGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR CCA 90 bp GACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTGCATTGTATaGTTCTCAAAGGCCGTTGATTCTACAGGCCAAATACACCTCCAC +
Preference number: 1 (lower is better)
Translates to: DLKLFDHPSHIRCIV*FSKAVDSTGQIHLH
Trigger: GTGGAGGTGTATTTGGCCTGTAGAATCAACGGCCTTTGAGAACCATACAATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR TCA 90 bp ACTACTAACCTGCTCAAGGCCCAAAGAATAAGGGATCTTGGAGTCTaGAATCTTCATTCTTGCAACCTTAAGTCCTCATCATCTGTAAGC +
Preference number: 1 (lower is better)
Translates to: TTNLLKAQRIRDLGV*NLHSCNLKSSSSVS
Trigger: GCTTACAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCTTATTCTTTGGGCCTTGAGCAGGTTAGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CCA 90 bp GTCTTAATTTTCCAGTCTTCTACATTTCATGACTGGGAATGTCTTTaGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTAAACTG +
Preference number: 1 (lower is better)
Translates to: VLIFQSSTFHDWECL*ECALFELSGLTCKL
Trigger: CAGTTTACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGTCATGAAATGTAGAAGACTGGAAAATTAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR GCA 90 bp TTGAATTTGGACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTaGATTGTATGGTTCTCAAAGGCCGTTGATTCTACAGGCCAAATA +
Preference number: 1 (lower is better)
Translates to: LNLDLKLFDHPSHIR*IVWFSKAVDSTGQI
Trigger: TATTTGGCCTGTAGAATCAACGGCCTTTGAGAACCATACAATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR CCA 90 bp GGAGAAACAAGCAGGATAAAGTGGTGTCATTATTTGGCCTTACAATaGCTATTTGGAAATCACTGTGCCAATCCCAATAATAAAAGCTCT +
Preference number: 1 (lower is better)
Translates to: GETSRIKWCHYLALQ*LFGNHCANPNNKSS
Trigger: AGAGCTTTTATTATTGGGATTGGCACAGTGATTTCCAAATAGCCATTGTAAGGCCAAATAATGACACCACTTTATCCTGCTTGTTTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR CCA 90 bp AAAAACAGCATCTCAAATTCCTGTGGAGAAACAAGCAGGATAAAGTaGTGTCATTATTTGGCCTTACAATGGCTATTTGGAAATCACTGT +
Preference number: 1 (lower is better)
Translates to: KNSISNSCGETSRIK*CHYLALQWLFGNHC
Trigger: ACAGTGATTTCCAAATAGCCATTGTAAGGCCAAATAATGACACCACTTTATCCTGCTTGTTTCTCCACAGGAATTTGAGATGCTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR-3UTR CCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCATGGCAGGACCATCCCTaGGCAGGGCTTCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: HPWAGLPAASMASSLDSAWQDHP*AGLPAA
Trigger: AGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCCA...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp CGGGCAGCTGTGGCAGATTTGAAGGCAAAAGGAAGGGAGGCTACAGTTGTAGCTTGGCAGGACCATCCCTaGGCAGGGCTTCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: RAAVADLKAKGREATVVAWQDHP*AGLPAA
Trigger: AGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCCA...AGCTACAACTGTAGCCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR CAA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTaGCAGCCTCCTCATGGCAGGACCATCCCTGGGCAGGGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: LMAGAEFTILSPLIG*QPPHGRTIPGQGFL
Trigger: CAGGAAGCCCTGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp CGGGCAGCTGTGGCAGATTTGAAGGCAAAAGGAAGGGAGGCTACAGTTGTAGCTGTTGCAGCCTCCTCATaGCAGGACCATCCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: RAAVADLKAKGREATVVAVAASS*QDHPWA
Trigger: TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAAC...AGCTACAACTGTAGCCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR CCA 90 bp ATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGTCTCTCCCCTATTGCTaGCTTCCTGGCCTTCTGAGC +
Preference number: 2 (lower is better)
Translates to: ILSPLIGLQPPHGRTIPGSLPYC*LPGLLS
Trigger: GCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGA...CCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CAA 90 bp CCCTGGGCCCAGCTTCTGGAGCTAGTCATGGAGATAATGGTTTCTTaGTGCTCCTGTTGTGACCAGGAAAGGGGATCTCCTGGCTGCACC +
Preference number: 2 (lower is better)
Translates to: PWAQLLELVMEIMVS*CSCCDQERGSPGCT
Trigger: GGTGCAGCCAGGAGATCCCCTTTCCTGGTCACAACAGGAGCACAAAGAAACCATTATCTCCATGACTAGCTCCAGAAGCTGGGCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR TCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCATCAGACCTTTGCCCCTaGGTGGTCCCATCTGTAATT +
Preference number: 2 (lower is better)
Translates to: LEPSYRVAASSWQDHPWASDLCP*VVPSVI
Trigger: AATTACAGATGGGACCACTCAGGGGCAAAGGTCTGA...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp TGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAGGGCAGTCAGACCTTTGCCCCTaGGTGGTCCCATCTGTAATT +
Preference number: 2 (lower is better)
Translates to: WAGLPAASMASSLDSAGQSDLCP*VVPSVI
Trigger: AATTACAGATGGGACCACTCAGGGGCAAAGGTCTGA...CTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CAA 90 bp TCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCACAATCTaGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATC +
Preference number: 2 (lower is better)
Translates to: SWPSELLMAGAEFTI*SPLIGLQPPHGRTI
Trigger: GATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp GCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTACCCTCCTCTGGGCCCATGCCAAGAAGGAAATCTaGGGAGAGAGAGGTCACCTT +
Preference number: 2 (lower is better)
Translates to: ARKRLQLRQQSLTLLWAHAKKEI*GERGHL
Trigger: AAGGTGACCTCTCTCTCCTCAGATTTCCTTCTTGGC...ATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCACCGTGTTTTACAAGGTaGCAGGTGTGTGAGCACCAG +
Preference number: 2 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSPCFTR*QVCEHQ
Trigger: CTGGTGCTCACACACCTGTCACCTTGTAAAACACGG...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCATTCCTGCAGCTTCAATaGCCTCAAGTCTTGACTCTG +
Preference number: 2 (lower is better)
Translates to: LEPSYRVAASSWQDHPWAFLQLQ*PQVLTL
Trigger: CAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAA...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTTGGCAGGACCATCCCTaGGCAGGGCTTCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSWQDHP*AGLPAA
Trigger: AGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCCA...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTGTTGCAGCCTCCTCATaGCAGGACCATCCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPVAASS*QDHPWA
Trigger: TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAAC...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp AAAAGGGATGTGTGGCACCCTATGGGCATTCTTACAGACTCAACTCAGACTGCCAGGCCTGCCTGGAGGTaGAACTCAACTGGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: KRDVWHPMGILTDSTQTARPAWR*NSTGGL
Trigger: CAGACCCCCAGTTGAGTTCCACCTCCAGGCAGGCCT...GGCAGTCTGAGTTGAGTCTGTAAGAATGCCCATAGGGTGCCACACATCCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR-3UTR CCA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGGGGCTCTGGGGTCAGTaGGCAGACTTTCCCAACCCA +
Preference number: 2 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLGLWGQ*ADFPNP
Trigger: TGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCCC...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR-3UTR TCA 90 bp GCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTACCCTCCTCTGGGCCCATGGTCACCTTGGGACTTaGGTAATGGATACTTCAGAC +
Preference number: 2 (lower is better)
Translates to: ARKRLQLRQQSLTLLWAHGHLGT*VMDTSD
Trigger: GTCTGAAGTATCCATTACTCAAGTCCCAAGGTGACC...ATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCATCAGACCTTTGCCCCTaGGTGGTCCCATCTGTAATT +
Preference number: 2 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSSDLCP*VVPSVI
Trigger: AATTACAGATGGGACCACTCAGGGGCAAAGGTCTGA...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGGTGATTTCTCGGAGCTaGTGTAGCAACCGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQEVISRS*CSNRFS
Trigger: AGAGAAACGGTTGCTACATCAGCTCCGAGAAATCAC...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR-3UTR CCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCAAGAGAGAGGTCACCTTaGGACTTGAGTAATGGATAC +
Preference number: 2 (lower is better)
Translates to: LEPSYRVAASSWQDHPWARERSP*DLSNGY
Trigger: GTATCCATTACTCAAGTCCCAAGGTGACCTCTCTCT...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp CGGGCAGCTGTGGCAGATTTGAAGGCAAAAGGAAGGGAGGCTACAGTTGTAGCTCTATTGCTGGCTTCCTaGCCTTCTGAGCTCCTCATG +
Preference number: 2 (lower is better)
Translates to: RAAVADLKAKGREATVVALLLAS*PSELLM
Trigger: CATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAG...AGCTACAACTGTAGCCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR TCA 90 bp CCTAGGAAGACCCTCGCTGCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTGGTCACCTTGGGACTTaGGTAATGGATACTTCAGAC +
Preference number: 2 (lower is better)
Translates to: PRKTLAARKRLQLRQQSLGHLGT*VMDTSD
Trigger: GTCTGAAGTATCCATTACTCAAGTCCCAAGGTGACC...AAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGCAGCGAGGGTCTTCCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp TGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAGGGCAGATGTTCGTTCACAGGTaGACTATCTGTTACACCTAC +
Preference number: 2 (lower is better)
Translates to: WAGLPAASMASSLDSAGQMFVHR*TICYTY
Trigger: GTAGGTGTAACAGATAGTTCACCTGTGAACGAACAT...CTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAAGAAAAGAGGATGTCTaGGGCAGCATCAATGTTCCT +
Preference number: 2 (lower is better)
Translates to: HPWAGLPAASMASSLDSARKEDV*GSINVP
Trigger: AGGAACATTGATGCTGCCTCAGACATCCTCTTTTCT...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGAGAAAAGAGGATGTCTaGGGCAGCATCAATGTTCCT +
Preference number: 2 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQERKEDV*GSINVP
Trigger: AGGAACATTGATGCTGCCTCAGACATCCTCTTTTCT...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp TGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAGGGCAGCTTTCCCAACCCAAATaGTCTGATTCTTCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: WAGLPAASMASSLDSAGQLSQPK*SDSSSS
Trigger: AGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAG...CTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR-3UTR CCA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCATCATTCTCAGATCAGTaGGAGTCTTCCCTACTCTGG +
Preference number: 2 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSSFSDQ*ESSLLW
Trigger: CCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGA...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCATTCCTGCAGCTTCAATaGCCTCAAGTCTTGACTCTG +
Preference number: 2 (lower is better)
Translates to: HRFSPLLLASWPSELLMAFLQLQ*PQVLTL
Trigger: CAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAA...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp ACTGGGAATGTCTTTGGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTAGTTGCAGCCTCCTCATaGCAGGACCATCCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: TGNVFGNVPSSNSQVLHVVAASS*QDHPWA
Trigger: TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAAC...TACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR CCA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTTCTCTCCCCTATTGCTaGCTTCCTGGCCTTCTGAGC +
Preference number: 2 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPSLPYC*LPGLLS
Trigger: GCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGA...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCATGGGCACTGCTATATTaGTTCTCTGCAACAGACATA +
Preference number: 2 (lower is better)
Translates to: LEPSYRVAASSWQDHPWAWALLY*FSATDI
Trigger: TATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCA...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp ACAGGTCATCTTCCTTGCTCATGCTCATCTAAAAGGGATGTGTGGCACCCTATGCTGCAAAGGCCTGCCTaGAGGTGGAACTCAACTGGG +
Preference number: 2 (lower is better)
Translates to: TGHLPCSCSSKRDVWHPMLQRPA*RWNSTG
Trigger: CCCAGTTGAGTTCCACCTCCAGGCAGGCCTTTGCAG...CATAGGGTGCCACACATCCCTTTTAGATGAGCATGAGCAAGGAAGATGACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR-3UTR CCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCAAGCAGAAAGTTCTTTTaGGTCAGGGTAATCCACCAA +
Preference number: 2 (lower is better)
Translates to: LEPSYRVAASSWQDHPWASRKFF*VRVIHQ
Trigger: TTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCT...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR-3UTR TCA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCGTGTTTTACAAGGTaGCAGGTGTGTGAGCACCAG +
Preference number: 2 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPPCFTR*QVCEHQ
Trigger: CTGGTGCTCACACACCTGTCACCTTGTAAAACACGG...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTTCAGACCTTTGCCCCTaGGTGGTCCCATCTGTAATT +
Preference number: 2 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLSDLCP*VVPSVI
Trigger: AATTACAGATGGGACCACTCAGGGGCAAAGGTCTGA...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAATGTTCGTTCACAGGTaGACTATCTGTTACACCTAC +
Preference number: 2 (lower is better)
Translates to: HPWAGLPAASMASSLDSAMFVHR*TICYTY
Trigger: GTAGGTGTAACAGATAGTTCACCTGTGAACGAACAT...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAAGAAAAGAGGATGTCTaGGGCAGCATCAATGTTCCT +
Preference number: 2 (lower is better)
Translates to: HRFSPLLLASWPSELLMARKEDV*GSINVP
Trigger: AGGAACATTGATGCTGCCTCAGACATCCTCTTTTCT...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp GGCTCATTCTCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCGCTTCCTCTGTCCACTaGAAACCAGGAGTGCAAAGG +
Preference number: 2 (lower is better)
Translates to: GSFSDQWESSLLWRKEDVASSVH*KPGVQR
Trigger: CCTTTGCACTCCTGGTTTTCAGTGGACAGAGGAAGC...GACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp AAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTAGCTTCCTCTGTCCACTaGAAACCAGGAGTGCAAAGG +
Preference number: 2 (lower is better)
Translates to: KTQISEYGTHGLYPWALLASSVH*KPGVQR
Trigger: CCTTTGCACTCCTGGTTTTCAGTGGACAGAGGAAGC...TAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR GCA 90 bp AAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTAGATTCTCTCCCCTATTaGTGGCTTCCTGGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: KTQISEYGTHGLYPWALLDSLPY*WLPGLL
Trigger: CAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC...TAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR GCA 90 bp ATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCGATTCTCTCCCCTATTaGTGGCTTCCTGGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: MVSTPGHCYIGSLQQTYSDSLPY*WLPGLL
Trigger: CAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC...GGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR GCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCAGCTATATTGGTTCTCTaGAACAGACATACTCCAACT +
Preference number: 2 (lower is better)
Translates to: LEPSYRVAASSWQDHPWAAILVL*NRHTPT
Trigger: AGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGC...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAAGAGAGAGGTCACCTTaGGACTTGAGTAATGGATAC +
Preference number: 2 (lower is better)
Translates to: HRFSPLLLASWPSELLMARERSP*DLSNGY
Trigger: GTATCCATTACTCAAGTCCCAAGGTGACCTCTCTCT...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCTCTCTCCCCTATTGCTaGCTTCCTGGCCTTCTGAGC +
Preference number: 2 (lower is better)
Translates to: SQKDPNIRVWNTWSLPLGSLPYC*LPGLLS
Trigger: GCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGA...GCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTTCTCTCCCCTATTGCTaGCTTCCTGGCCTTCTGAGC +
Preference number: 2 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSSLPYC*LPGLLS
Trigger: GCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGA...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAAGGGATCTTGGAGTCTaGAATCTTCATTCTTGCAAC +
Preference number: 2 (lower is better)
Translates to: HRFSPLLLASWPSELLMARDLGV*NLHSCN
Trigger: GTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCT...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp AAGGAGCTGACCCAAGATTCCACAGCTAGAAAATGCAGGGACAGATTATGGCTCGCTTCCTCTGTCCACTaGAAACCAGGAGTGCAAAGG +
Preference number: 2 (lower is better)
Translates to: KELTQDSTARKCRDRLWLASSVH*KPGVQR
Trigger: CCTTTGCACTCCTGGTTTTCAGTGGACAGAGGAAGC...GAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGAATCTTGGGTCAGCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR TCA 90 bp AATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTAATGGCCTCAAGTCTTaGCTCTGCAGGGCAGGGTCT +
Preference number: 2 (lower is better)
Translates to: NIRVWNTWSLPLGTAILVNGLKS*LCRAGS
Trigger: AGACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATT...AACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGTTCACACATACCTCATaGTGTAATTCATGGGTGCTA +
Preference number: 2 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQEFTHTS*CNSWVL
Trigger: TAGCACCCATGAATTACATCATGAGGTATGTGTGAA...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR GCA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTATGTCTTTGGGAATGTaGCCTCTTCGAACTCTCAGG +
Preference number: 2 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLMSLGM*PLRTLR
Trigger: CCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACAT...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR GCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAACCAAGATTGTTTCTTaGCTACGCTTGATACAGTCT +
Preference number: 2 (lower is better)
Translates to: HPWAGLPAASMASSLDSATKIVS*LRLIQS
Trigger: AGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGT...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR-3UTR CCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTATTGCTGGCTTCCTaGCCTTCTGAGCTCCTCATG +
Preference number: 2 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSLLLAS*PSELLM
Trigger: CATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAG...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp CCTATGGGCATTCTTACAGACTCAACTCAGACTGCCTGCAGAATTCCTGGGCGAGAGGTGGAACTCAACTaGGGGTCTGCTTTAAAGAAC +
Preference number: 2 (lower is better)
Translates to: PMGILTDSTQTACRIPGREVELN*GSALKN
Trigger: GTTCTTTAAAGCAGACCCCCAGTTGAGTTCCACCTC...TCGCCCAGGAATTCTGCAGGCAGTCTGAGTTGAGTCTGTAAGAATGCCCATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR-3UTR CCA 90 bp CTCTTGCTCAGGGTAGCTATCTGCACTGAATCCAGCATTCTCTGCCAAGACAGCGGGTGTTTCCAGGCATaGCAGTATAGCATTTCCCAT +
Preference number: 2 (lower is better)
Translates to: LLLRVAICTESSILCQDSGCFQA*QYSISH
Trigger: ATGGGAAATGCTATACTGCCATGCCTGGAAACACCC...GCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528463.5
3UTR CAA 90 bp ATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATaGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTGAGTTGG +
Preference number: 2 (lower is better)
Translates to: IRVWNTWSLPLGTAI*VLCNRHTPTSLLSW
Trigger: CCAACTCAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp ATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCGGTCACCTTGGGACTTaGGTAATGGATACTTCAGAC +
Preference number: 2 (lower is better)
Translates to: MVSTPGHCYIGSLQQTYSGHLGT*VMDTSD
Trigger: GTCTGAAGTATCCATTACTCAAGTCCCAAGGTGACC...GGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGCCGTGTTTTACAAGGTaGCAGGTGTGTGAGCACCAG +
Preference number: 2 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLPCFTR*QVCEHQ
Trigger: CTGGTGCTCACACACCTGTCACCTTGTAAAACACGG...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp GTTCATTTTATCTGTCAGGCTCTCTCTCGTCACACTGAGTTTTCTGAGGGTAGAAATGGCCTCAAGTCTTaGCTCTGCAGGGCAGGGTCT +
Preference number: 2 (lower is better)
Translates to: VHFICQALSRHTEFSEGRNGLKS*LCRAGS
Trigger: AGACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATT...TCTACCCTCAGAAAACTCAGTGTGACGAGAGAGAGCCTGACAGATAAAATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR TCA 90 bp TTATCGGTGCTGATGCCCAACCCTTCATCTTTAAAGTCTTGGGACCACTCTTCTTCCAGCACCTCCACCTaGTCCTTTGGCCTTTGCAAA +
Preference number: 2 (lower is better)
Translates to: LSVLMPNPSSLKSWDHSSSSTST*SFGLCK
Trigger: TTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGA...AGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528463.5
3UTR-3UTR CCA 90 bp GGCTCATTCTCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCTCATTCTCAGATCAGTaGGAGTCTTCCCTACTCTGG +
Preference number: 2 (lower is better)
Translates to: GSFSDQWESSLLWRKEDVSFSDQ*ESSLLW
Trigger: CCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGA...GACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp ATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGTTCCTGCAGCTTCAATaGCCTCAAGTCTTGACTCTG +
Preference number: 2 (lower is better)
Translates to: MEHMVSTPGHCYIGSLQQFLQLQ*PQVLTL
Trigger: CAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAA...CTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCATGGTCTCTACCCCTaGGCACTGCTATATTGGTTC +
Preference number: 2 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSHGLYP*ALLYWF
Trigger: GAACCAATATAGCAGTGCCCAGGGGTAGAGACCATG...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp TTCTGTCTCCTTCAGTTTTTCTTGCAGTTGAGCAAGCTCAAAACTGGTAATTTTCGAGCCCCAGGAGTCTaGCCATCTGAGGGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: FCLLQFFLQLSKLKTGNFRAPGV*PSEGAW
Trigger: CCAGGCACCCTCAGATGGCCAGACTCCTGGGGCTCG...AAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528463.5
3UTR CAA 90 bp CAGGGCCAAGAAGGAAATCTGAGGAGAGAGAGGTCACCTTGGGACTaGAGTAATGGATACTTCAGACTGGCTGTTTTCACTCTAAACCCT +
Preference number: 2 (lower is better)
Translates to: QGQEGNLRRERSPWD*SNGYFRLAVFTLNP
Trigger: AGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCAAGGTGACCTCTCTCTCCTCAGATTTCCTTCTTGGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR-3UTR TCA 90 bp CTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTGGGTCACCTTGGGACTTaGGTAATGGATACTTCAGAC +
Preference number: 2 (lower is better)
Translates to: LGTAILVLCNRHTPTSLLGHLGT*VMDTSD
Trigger: GTCTGAAGTATCCATTACTCAAGTCCCAAGGTGACC...CAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp GCAGTTCTGTTAAGCAGAACAGGGGTAAAGGAAGCTAGATATCCAGGTAGTATCGCTTCCTCTGTCCACTaGAAACCAGGAGTGCAAAGG +
Preference number: 2 (lower is better)
Translates to: AVLLSRTGVKEARYPGSIASSVH*KPGVQR
Trigger: CCTTTGCACTCCTGGTTTTCAGTGGACAGAGGAAGC...GATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTGCTTAACAGAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp CACATACCTCATGATGTAATTCATGGGTGCTATCTTGTCTCAAGAAGACACACGAATGGCCTCAAGTCTTaGCTCTGCAGGGCAGGGTCT +
Preference number: 2 (lower is better)
Translates to: HIPHDVIHGCYLVSRRHTNGLKS*LCRAGS
Trigger: AGACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATT...CGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACATCATGAGGTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR GCA 90 bp GTTCATTTTATCTGTCAGGCTCTCTCTCGTCACACTGAGTTTTCTGAGGGTAGAGATTCTCTCCCCTATTaGTGGCTTCCTGGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: VHFICQALSRHTEFSEGRDSLPY*WLPGLL
Trigger: CAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC...TCTACCCTCAGAAAACTCAGTGTGACGAGAGAGAGCCTGACAGATAAAATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR GCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGATGTAATTCATGGGTaGTATCTTGTCTCAAGAAGA +
Preference number: 2 (lower is better)
Translates to: HRFSPLLLASWPSELLMADVIHG*YLVSRR
Trigger: TCTTCTTGAGACAAGATAGCACCCATGAATTACATC...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR GCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCATGCTGCCTGTATATaGTTTATCGGTGCTGATGCC +
Preference number: 2 (lower is better)
Translates to: KKTQISEYGTHGLYPWALHAACI*FIGADA
Trigger: GGCATCAGCACCGATAAAGCATATACAGGCAGCATG...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR-3UTR CCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGTCATTCTCAGATCAGTaGGAGTCTTCCCTACTCTGG +
Preference number: 2 (lower is better)
Translates to: KKTQISEYGTHGLYPWALSFSDQ*ESSLLW
Trigger: CCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGA...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp ACTGGGAATGTCTTTGGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTACATGGTCTCTACCCCTaGGCACTGCTATATTGGTTC +
Preference number: 2 (lower is better)
Translates to: TGNVFGNVPSSNSQVLHVHGLYP*ALLYWF
Trigger: GAACCAATATAGCAGTGCCCAGGGGTAGAGACCATG...TACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR CCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTGCAGGAACATGTTTCTaGCTTTGGATCACACGAGGT +
Preference number: 2 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSAGTCF*LWITRG
Trigger: ACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGC...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR CAA 90 bp TTCCTCTGTCCACTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTaGGCAGTTCTGTTAAGCAGAACAGGGGTAAAGGAAGCTAGATAT +
Preference number: 2 (lower is better)
Translates to: FLCPLKTRSAKVLLG*AVLLSRTGVKEARY
Trigger: ATATCTAGCTTCCTTTACCCCTGTTCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAGTGGACAGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CAA 90 bp ATATGCTTTATCGGTGCTGATGCCCAACCCTTCATCTTTAAAGTCTaGGGACCACTCTTCTTTGGTGGTTTCCTCTTGCTCAGGGTAGCT +
Preference number: 2 (lower is better)
Translates to: ICFIGADAQPFIFKV*GPLFFGGFLLLRVA
Trigger: AGCTACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
3UTR-3UTR TCA 90 bp ATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCATGTTCGTTCACAGGTaGACTATCTGTTACACCTAC +
Preference number: 2 (lower is better)
Translates to: MVSTPGHCYIGSLQQTYSMFVHR*TICYTY
Trigger: GTAGGTGTAACAGATAGTTCACCTGTGAACGAACAT...GGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp AAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTAATGTTCGTTCACAGGTaGACTATCTGTTACACCTAC +
Preference number: 2 (lower is better)
Translates to: KTQISEYGTHGLYPWALLMFVHR*TICYTY
Trigger: GTAGGTGTAACAGATAGTTCACCTGTGAACGAACAT...TAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp GCAGAGTCTTACCCTCCTCTGGGCCCATTAGCCCCACAAACAAAATGTTCTCTTAGGGATCTTGGAGTCTaGAATCTTCATTCTTGCAAC +
Preference number: 2 (lower is better)
Translates to: AESYPPLGPLAPQTKCSLRDLGV*NLHSCN
Trigger: GTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCT...AAGAGAACATTTTGTTTGTGGGGCTAATGGGCCCAGAGGAGGGTAAGACTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTAGGGATCTTGGAGTCTaGAATCTTCATTCTTGCAAC +
Preference number: 2 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPRDLGV*NLHSCN
Trigger: GTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCT...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTCCAACTTCCCTCTTaGGTTGGCACTTTGTATACA +
Preference number: 2 (lower is better)
Translates to: LKKTQISEYGTHGLYPWALQLPS*VGTLYT
Trigger: TGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAG...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp CTCAACTCAGACTGCCTGCAGAATTCCTGGGCGAGAAAGAACTCATCTTATTTAGGCAGGGGAGTGCATTaGATTGTATCACTCACTGGA +
Preference number: 2 (lower is better)
Translates to: LNSDCLQNSWARKNSSYLGRGVH*IVSLTG
Trigger: TCCAGTGAGTGATACAATTCAATGCACTCCCCTGCC...TAAATAAGATGAGTTCTTTCTCGCCCAGGAATTCTGCAGGCAGTCTGAGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR-3UTR TCA 90 bp GGCTCATTCTCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCTTTCTTGCCTACGCTTaGTACAGTCTGAAAGGTCAT +
Preference number: 2 (lower is better)
Translates to: GSFSDQWESSLLWRKEDVFLAYA*YSLKGH
Trigger: ATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAA...GACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR-3UTR GCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGTCTACCCCTGGGCACTaGTATATTGGTTCTCTGCAA +
Preference number: 2 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLSTPGH*YIGSLQ
Trigger: TTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGA...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGTCATTCTCAGATCAGTaGGAGTCTTCCCTACTCTGG +
Preference number: 2 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLSFSDQ*ESSLLW
Trigger: CCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGA...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp GGCTCATTCTCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCTGGGCACTGCTATATTaGTTCTCTGCAACAGACATA +
Preference number: 2 (lower is better)
Translates to: GSFSDQWESSLLWRKEDVWALLY*FSATDI
Trigger: TATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCA...GACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGACTGGGAATGTCTTTaGGAATGTGCCCTCTTCGAA +
Preference number: 2 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLDWECL*ECALFE
Trigger: TTCGAAGAGGGCACATTCCCAAAGACATTCCCAGTC...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR TCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGCTCCAACTTCCCTCTTaGGTTGGCACTTTGTATACA +
Preference number: 2 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLLQLPS*VGTLYT
Trigger: TGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAG...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp CTATCTGCACTGAATCCAGCATTCTCTGCCAAGACAGCAGGATCCTCGTCTTCAACGCTTGATACAGTCTaGAAGGTCATAAATTGGGTA +
Preference number: 2 (lower is better)
Translates to: LSALNPAFSAKTAGSSSSTLDTV*KVINWV
Trigger: TACCCAATTTATGACCTTTCAGACTGTATCAAGCGT...TGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
3UTR-3UTR GCA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTGATGTAATTCATGGGTaGTATCTTGTCTCAAGAAGA +
Preference number: 2 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLDVIHG*YLVSRR
Trigger: TCTTCTTGAGACAAGATAGCACCCATGAATTACATC...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR GCA 90 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCTACGCTTCCTCAGCATaGTGCCTGTATATGCTTTAT +
Preference number: 2 (lower is better)
Translates to: SQKDPNIRVWNTWSLPLGYASSA*CLYMLY
Trigger: ATAAAGCATATACAGGCAGCATGCTGAGGAAGCGTA...GCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR-3UTR CCA 90 bp GGCTGCTTCTGTCTCCTTCAGTTTTTCTTGCAGTTGAGCAAGCTCAAAACTGGTCCCAAAACCGTAGATTaGAATAATCTGCCCCATCAG +
Preference number: 2 (lower is better)
Translates to: GCFCLLQFFLQLSKLKTGPKTVD*NNLPHQ
Trigger: CTGATGGGGCAGATTATTCCAATCTACGGTTTTGGG...ACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528463.5
3UTR CAA 90 bp TCACAGGTGAACTATCTGTTACACCTACCAGGAAGAGTCAGACCTTaGCCCCTGAGTGGTCCCATCTGTAATTACAATAGACCAAACATA +
Preference number: 2 (lower is better)
Translates to: SQVNYLLHLPGRVRP*PLSGPICNYNRPNI
Trigger: TATGTTTGGTCTATTGTAATTACAGATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR TCA 90 bp GTTCATTTTATCTGTCAGGCTCTCTCTCGTCACACTGAGTTTTCTGAGGGTAGACTCCAACTTCCCTCTTaGGTTGGCACTTTGTATACA +
Preference number: 2 (lower is better)
Translates to: VHFICQALSRHTEFSEGRLQLPS*VGTLYT
Trigger: TGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAG...TCTACCCTCAGAAAACTCAGTGTGACGAGAGAGAGCCTGACAGATAAAATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR GCA 90 bp TGGGGGTCTGCTTTAAAGAACCTACACCCATGTCTCCCCAGAGCTAGGAAATATTTTTTGGCAGGGGAGTaGATTGAATTGTATCACTCA +
Preference number: 2 (lower is better)
Translates to: WGSALKNLHPCLPRARKYFLAGE*IELYHS
Trigger: TGAGTGATACAATTCAATGCACTCCCCTGCCAAAAA...ATATTTCCTAGCTCTGGGGAGACATGGGTGTAGGTTCTTTAAAGCAGACCCCCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR-3UTR GCA 90 bp TCCAACTTCCCTCTTGAGTTGGCACTTTGTATACAAGATCAGTCCTCATTTGTTGAATCCAGCATTCTCTaGCAAGACAGCAGGATCCTC +
Preference number: 2 (lower is better)
Translates to: SNFPLELALCIQDQSSFVESSIL*QDSRIL
Trigger: GAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTC...AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR-3UTR CCA 90 bp GCAGTTCTGTTAAGCAGAACAGGGGTAAAGGAAGCTAGATATCCAGGTAGTATCAGAGAGAGGTCACCTTaGGACTTGAGTAATGGATAC +
Preference number: 2 (lower is better)
Translates to: AVLLSRTGVKEARYPGSIRERSP*DLSNGY
Trigger: GTATCCATTACTCAAGTCCCAAGGTGACCTCTCTCT...GATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTGCTTAACAGAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp GGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAAGAATAAGGGATCTTaGAGTCTGAAATCTTCATTC +
Preference number: 2 (lower is better)
Translates to: GAEFTILSPLIGLQPPHGKNKGS*SLKSSF
Trigger: GAATGAAGATTTCAGACTCCAAGATCCCTTATTCTT...GCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGACTTCCCTCTTGAGTTaGCACTTTGTATACAAGATC +
Preference number: 2 (lower is better)
Translates to: KKTQISEYGTHGLYPWALTSLLS*HFVYKI
Trigger: GATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGT...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp TGGGGGTCTGCTTTAAAGAACCTACACCCATGTCTCCCCAGAGCTAGGAAATATCTTACAATGGCTATTTaGAAATCACTGTGCCAATCC +
Preference number: 2 (lower is better)
Translates to: WGSALKNLHPCLPRARKYLTMAI*KSLCQS
Trigger: GGATTGGCACAGTGATTTCCAAATAGCCATTGTAAG...ATATTTCCTAGCTCTGGGGAGACATGGGTGTAGGTTCTTTAAAGCAGACCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR-3UTR CCA 90 bp CTGCCAAGACAGCAGGATCCTCGTCTTCATGAAAACAGCAGGAACATGTTTCTGAACCGTCAAATCCAATaGCTTTTTGTCAGTTCTCAC +
Preference number: 2 (lower is better)
Translates to: LPRQQDPRLHENSRNMFLNRQIQ*LFVSSH
Trigger: GTGAGAACTGACAAAAAGCCATTGGATTTGACGGTT...CAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528463.5
3UTR-3UTR TCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCAAATGGCCTCAAGTCTTaGCTCTGCAGGGCAGGGTCT +
Preference number: 2 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSNGLKS*LCRAGS
Trigger: AGACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATT...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR GCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGCTATATTGGTTCTCTaGAACAGACATACTCCAACT +
Preference number: 2 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLAILVL*NRHTPT
Trigger: AGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGC...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp AAGGAGCTGACCCAAGATTCCACAGCTAGAAAATGCAGGGACAGATTATGGCTCTTTAAACTGTTTTCCTaGCACCTTATTCATGCCAAG +
Preference number: 2 (lower is better)
Translates to: KELTQDSTARKCRDRLWLFKLFS*HLIHAK
Trigger: CTTGGCATGAATAAGGTGCCAGGAAAACAGTTTAAA...GAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGAATCTTGGGTCAGCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR TCA 90 bp TGTTTGAATTTGGACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTGCATTCCGTGTTTTACAAGGTaGCAGGTGTGTGAGCACCAG +
Preference number: 2 (lower is better)
Translates to: CLNLDLKLFDHPSHIRCIPCFTR*QVCEHQ
Trigger: CTGGTGCTCACACACCTGTCACCTTGTAAAACACGG...AATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR TCA 90 bp CACATACCTCATGATGTAATTCATGGGTGCTATCTTGTCTCAAGAAGACACACGAGGGATCTTGGAGTCTaGAATCTTCATTCTTGCAAC +
Preference number: 2 (lower is better)
Translates to: HIPHDVIHGCYLVSRRHTRDLGV*NLHSCN
Trigger: GTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCT...CGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACATCATGAGGTATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR TCA 90 bp TCCAACTTCCCTCTTGAGTTGGCACTTTGTATACAAGATCAGTCCTCATTTGTTAGAAAAGAGGATGTCTaGGGCAGCATCAATGTTCCT +
Preference number: 2 (lower is better)
Translates to: SNFPLELALCIQDQSSFVRKEDV*GSINVP
Trigger: AGGAACATTGATGCTGCCTCAGACATCCTCTTTTCT...AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CCA 90 bp CACATACCTCATGATGTAATTCATGGGTGCTATCTTGTCTCAAGAAGACACACGTGGGCACTGCTATATTaGTTCTCTGCAACAGACATA +
Preference number: 2 (lower is better)
Translates to: HIPHDVIHGCYLVSRRHTWALLY*FSATDI
Trigger: TATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCA...CGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACATCATGAGGTATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR CCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGTCTACATTTCATGACTaGGAATGTCTTTGGGAATGT +
Preference number: 2 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLSTFHD*ECLWEC
Trigger: ACATTCCCAAAGACATTCCCAGTCATGAAATGTAGA...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR CAA 90 bp TCAAATTCCTGTGGAGAAACAAGCAGGATAAAGTGGTGTCATTATTaGGCCTTACAATGGCTATTTGGAAATCACTGTGCCAATCCCAAT +
Preference number: 2 (lower is better)
Translates to: SNSCGETSRIKWCHY*ALQWLFGNHCANPN
Trigger: ATTGGGATTGGCACAGTGATTTCCAAATAGCCATTGTAAGGCCAAATAATGACACCACTTTATCCTGCTTGTTTCTCCACAGGAATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR-3UTR TCA 90 bp TGTTTGAATTTGGACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTGCATTCACCCTCGTGAGAAATaGAGACCGCAAGAAAAGAGA +
Preference number: 2 (lower is better)
Translates to: CLNLDLKLFDHPSHIRCIHPREK*RPQEKR
Trigger: TCTCTTTTCTTGCGGTCTTCATTTCTCACGAGGGTG...AATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR CCA 90 bp GAGGAAATTAAATGTACGTCCAAGTGCTGCTTCTTTATGGCACCAGAGAACAAGACAAGCAGGATAAAGTaGTGTCATTATTTGGCCTTA +
Preference number: 2 (lower is better)
Translates to: EEIKCTSKCCFFMAPENKTSRIK*CHYLAL
Trigger: TAAGGCCAAATAATGACACCACTTTATCCTGCTTGT...CTTGTTCTCTGGTGCCATAAAGAAGCAGCACTTGGACGTACATTTAATTTCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR-3UTR GCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCAAAGACACACGTCAGATaGAGTAAGGAGAAAAGGCCT +
Preference number: 2 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSKTHVR*SKEKRP
Trigger: AGGCCTTTTCTCCTTACTGCATCTGACGTGTGTCTT...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR CCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCAAGAGAGAGGTCACCTTaGGACTTGAGTAATGGATAC +
Preference number: 2 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSRERSP*DLSNGY
Trigger: GTATCCATTACTCAAGTCCCAAGGTGACCTCTCTCT...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR CCA 90 bp TTCTGTCTCCTTCAGTTTTTCTTGCAGTTGAGCAAGCTCAAAACTGGTAATTTTATGATGCATCATAGGTaGAAATCGGCCCAATTTTCC +
Preference number: 2 (lower is better)
Translates to: FCLLQFFLQLSKLKTGNFMMHHR*KSAQFS
Trigger: GGAAAATTGGGCCGATTTCCACCTATGATGCATCAT...AAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528463.5
3UTR-3UTR GCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCAGATGTAATTCATGGGTaGTATCTTGTCTCAAGAAGA +
Preference number: 2 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSDVIHG*YLVSRR
Trigger: TCTTCTTGAGACAAGATAGCACCCATGAATTACATC...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR CAA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCAAGCCCTCTTATAGGGTaGCAGCCTCCTCATGGCAGG +
Preference number: 3 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSSPLIG*QPPHGR
Trigger: CCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCT...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CCA 72 bp GGGCCTGCAAAGGCCTGCCTGGAGGTGGAACTCAACTaGGGGTCTGCTTTAAAGAACCTACACCCATGTCTC +
Preference number: 3 (lower is better)
Translates to: GPAKACLEVELN*GSALKNLHPCL
Trigger: GAGACATGGGTGTAGGTTCTTTAAAGCAGACCCCCAGTTGAGTTCCACCTCCAGGCAGGCCTTTGCAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR GCA 72 bp AAAGGCCTGCCTGGAGGTGGAACTCAACTGGGGGTCTaGTTTAAAGAACCTACACCCATGTCTCCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: KGLPGGGTQLGV*FKEPTPMSPQS
Trigger: GCTCTGGGGAGACATGGGTGTAGGTTCTTTAAAGCAGACCCCCAGTTGAGTTCCACCTCCAGGCAGGCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR GCA 72 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTaGTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAG +
Preference number: 3 (lower is better)
Translates to: RTVHKHTDSLPY*WLPGLLSSSWQ
Trigger: CTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CCA 72 bp AGGCCAAATACACCTCCACTCCTCATCACGACTCCCTaGGCCCAGCTTCTGGAGCTAGTCATGGAGATAATG +
Preference number: 3 (lower is better)
Translates to: RPNTPPLLITTP*AQLLELVMEIM
Trigger: CATTATCTCCATGACTAGCTCCAGAAGCTGGGCCCAGGGAGTCGTGATGAGGAGTGGAGGTGTATTTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR CAA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTGGAAGAGTCAGACCTTaGCCCCTGAGTGGTCCCATC +
Preference number: 3 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPGRVRP*PLSGPI
Trigger: GATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCC...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGGGAAGAGTCAGACCTTaGCCCCTGAGTGGTCCCATC +
Preference number: 3 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLGRVRP*PLSGPI
Trigger: GATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCC...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAATGGCCTCAAGTCTaGACTCTGCAGGGCAGGGTC +
Preference number: 3 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLQWPQV*TLQGRV
Trigger: GACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATTG...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp GGCTCATTCTCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCCAATGGCCTCAAGTCTaGACTCTGCAGGGCAGGGTC +
Preference number: 3 (lower is better)
Translates to: GSFSDQWESSLLWRKEDVQWPQV*TLQGRV
Trigger: GACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATTG...GACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR TCA 72 bp AGGGTGTCAGGTGTGACATCTCAGCAACACTGGACTTaGCAGAGTGGTGACAGGGATCATGCTGTCACCAAG +
Preference number: 3 (lower is better)
Translates to: RVSGVTSQQHWT*QSGDRDHAVTK
Trigger: CTTGGTGACAGCATGATCCCTGTCACCACTCTGTCAAGTCCAGTGTTGCTGAGATGTCACACCTGACACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR CAA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCAAGCCCTCTTATAGGGTaGCAGCCTCCTCATGGCAGG +
Preference number: 3 (lower is better)
Translates to: LKKTQISEYGTHGLYPWASPLIG*QPPHGR
Trigger: CCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCT...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCACTGGGCACTGCTATATaGGTTCTCTGCAACAGACAT +
Preference number: 3 (lower is better)
Translates to: HRFSPLLLASWPSELLMALGTAI*VLCNRH
Trigger: ATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp ATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGTTCATGGGTGCTATCTaGTCTCAAGAAGACACACGT +
Preference number: 3 (lower is better)
Translates to: ILSPLIGLQPPHGRTIPGFMGAI*SQEDTR
Trigger: ACGTGTGTCTTCTTGAGACAAGATAGCACCCATGAA...CCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR CAA 90 bp CTCTTGCTCAGGGTAGCTATCTGCACTGAATCCAGCATTCTCTGCCAAGACAGCCTGATCCTTTGGCCTTaGCAAATGCCTCGGCAAGGT +
Preference number: 3 (lower is better)
Translates to: LLLRVAICTESSILCQDSLILWP*QMPRQG
Trigger: ACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAG...GCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528463.5
3UTR-3UTR CAA 90 bp AATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTGGAAGAGTCAGACCTTaGCCCCTGAGTGGTCCCATC +
Preference number: 3 (lower is better)
Translates to: NIRVWNTWSLPLGTAILVGRVRP*PLSGPI
Trigger: GATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCC...AACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp TGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAGGGCAGAACTTCCCTCTTGAGTaGGCACTTTGTATACAAGAT +
Preference number: 3 (lower is better)
Translates to: WAGLPAASMASSLDSAGQNFPLE*ALCIQD
Trigger: ATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTT...CTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTTTTGGTGGTTTCCTCTaGCTCAGGGTAGCTATCTGC +
Preference number: 3 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLFGGFL*LRVAIC
Trigger: GCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAA...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR TCA 72 bp TGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCTaGGGCAGCATCAATGTTCCTAGGAAGACCCTCGCT +
Preference number: 3 (lower is better)
Translates to: WESSLLWRKEDV*GSINVPRKTLA
Trigger: AGCGAGGGTCTTCCTAGGAACATTGATGCTGCCTCAGACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR TCA 72 bp ACCAGGAAAGGGGATCTCCTGGCTGCACCACCCACCTaGTTTACCAAGAGTGATCCCAGATTATGCAGTTGT +
Preference number: 3 (lower is better)
Translates to: TRKGDLLAAPPT*FTKSDPRLCSC
Trigger: ACAACTGCATAATCTGGGATCACTCTTGGTAAATCAGGTGGGTGGTGCAGCCAGGAGATCCCCTTTCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR TCA 72 bp AGTCATGGAGATAATGGTTTCTTTGTGCTCCTGTTGTaGCCAGGAAAGGGGATCTCCTGGCTGCACCACCCA +
Preference number: 3 (lower is better)
Translates to: SHGDNGFFVLLL*PGKGISWLHHP
Trigger: TGGGTGGTGCAGCCAGGAGATCCCCTTTCCTGGTCACAACAGGAGCACAAAGAAACCATTATCTCCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR CAA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGAACTTCCCTCTTGAGTaGGCACTTTGTATACAAGAT +
Preference number: 3 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQENFPLE*ALCIQD
Trigger: ATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTT...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp CGGGCAGCTGTGGCAGATTTGAAGGCAAAAGGAAGGGAGGCTACAGTTGTAGCTGAAAAGGCCTTTAGTTaGGTCAAAATCCTCCCAGTC +
Preference number: 3 (lower is better)
Translates to: RAAVADLKAKGREATVVAEKAFS*VKILPV
Trigger: GACTGGGAGGATTTTGACCAAACTAAAGGCCTTTTC...AGCTACAACTGTAGCCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR CAA 90 bp ATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGTGGGACCACTCTTCTTaGGTGGTTTCCTCTTGCTCA +
Preference number: 3 (lower is better)
Translates to: MEHMVSTPGHCYIGSLQQWDHSS*VVSSCS
Trigger: TGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCA...CTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR GCA 72 bp CCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTaGTATATTGGTTCTCTGCAACAGACATACTCCAAC +
Preference number: 3 (lower is better)
Translates to: PSMEHMVSTPGH*YIGSLQQTYSN
Trigger: GTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CCA 72 bp GGAACACATGGTCTCTACCCCTGGGCACTGCTATATTaGTTCTCTGCAACAGACATACTCCAACTTCCCTCT +
Preference number: 3 (lower is better)
Translates to: GTHGLYPWALLY*FSATDILQLPS
Trigger: AGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CCA 72 bp GCTCATGCTCATCTAAAAGGGATGTGTGGCACCCTATaGGCATTCTTACAGACTCAACTCAGACTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: AHAHLKGMCGTL*AFLQTQLRLPA
Trigger: TGCAGGCAGTCTGAGTTGAGTCTGTAAGAATGCCCATAGGGTGCCACACATCCCTTTTAGATGAGCATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR-3UTR CAA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGAAGGTACTTCTGGGCTaGGCAGTTCTGTTAAGCAGA +
Preference number: 3 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLKVLLG*AVLLSR
Trigger: TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTT...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCTGGGCACTGCTATATaGGTTCTCTGCAACAGACAT +
Preference number: 3 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPLGTAI*VLCNRH
Trigger: ATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR GCA 72 bp CCTCTCTTCTTTGCCTACCTGAAGAAGTTCTTTGCATaGCTCAAGGCCCACCTCCCAAGAAACTGTGAAGTT +
Preference number: 3 (lower is better)
Translates to: PLFFAYLKKFFA*LKAHLPRNCEV
Trigger: AACTTCACAGTTTCTTGGGAGGTGGGCCTTGAGGCATGCAAAGAACTTCTTCAGGTAGGCAAAGAAGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR GCA 72 bp CTCAGGGTAGCTATCTGCACTGAATCCAGCATTCTCTaGCAAGACAGCAGGATCCTCGTCTTCATGAAAACA +
Preference number: 3 (lower is better)
Translates to: LRVAICTESSIL*QDSRILVFMKT
Trigger: TGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
3UTR CCA 72 bp GGCCAAGAAGGAAATCTGAGGAGAGAGAGGTCACCTTaGGACTTGAGTAATGGATACTTCAGACTGGCTGTT +
Preference number: 3 (lower is better)
Translates to: GQEGNLRRERSP*DLSNGYFRLAV
Trigger: AACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCAAGGTGACCTCTCTCTCCTCAGATTTCCTTCTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp GGCTCATTCTCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCGCAGAATTCACAATCTaGAGCCCTCTTATAGGGTTG +
Preference number: 3 (lower is better)
Translates to: GSFSDQWESSLLWRKEDVAEFTI*SPLIGL
Trigger: CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGC...GACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp AAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTAACTCCAACTTCCCTCTaGAGTTGGCACTTTGTATAC +
Preference number: 3 (lower is better)
Translates to: KTQISEYGTHGLYPWALLTPTSL*SWHFVY
Trigger: GTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAGT...TAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTACTCCAACTTCCCTCTaGAGTTGGCACTTTGTATAC +
Preference number: 3 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPTPTSL*SWHFVY
Trigger: GTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAGT...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp TCTAAAAGGGATGTGTGGCACCCTATGGGCATTCTTACAGACTCAACTCAGACTTGGCAGGGGAGTGCATaGAATTGTATCACTCACTGG +
Preference number: 3 (lower is better)
Translates to: SKRDVWHPMGILTDSTQTWQGSA*NCITHW
Trigger: CCAGTGAGTGATACAATTCAATGCACTCCCCTGCCA...AGTCTGAGTTGAGTCTGTAAGAATGCCCATAGGGTGCCACACATCCCTTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR-3UTR CAA 90 bp TATTTCTTCAGCAGAAAGTTCTTTTGGGTCAGGGTAATCCACCAAGATTGTTTCGGAAGAGTCAGACCTTaGCCCCTGAGTGGTCCCATC +
Preference number: 3 (lower is better)
Translates to: YFFSRKFFWVRVIHQDCFGRVRP*PLSGPI
Trigger: GATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCC...GAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR-3UTR CAA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGGCAGAATTCACAATCTaGAGCCCTCTTATAGGGTTG +
Preference number: 3 (lower is better)
Translates to: KKTQISEYGTHGLYPWALAEFTI*SPLIGL
Trigger: CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGC...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTAACTTCCCTCTTGAGTaGGCACTTTGTATACAAGAT +
Preference number: 3 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLNFPLE*ALCIQD
Trigger: ATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTT...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCCACCAAGATTGTTTCTaGCCTACGCTTGATACAGTC +
Preference number: 3 (lower is better)
Translates to: SQKDPNIRVWNTWSLPLGHQDCF*PTLDTV
Trigger: GACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTG...GCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR-3UTR CAA 90 bp AAGCTGTCCTGTGTTCACACTAATGTCCGTGTTTTACAAGGTGACAGGTGTGTGCAGCAGAAAGTTCTTTaGGGTCAGGGTAATCCACCA +
Preference number: 3 (lower is better)
Translates to: KLSCVHTNVRVLQGDRCVQQKVL*GQGNPP
Trigger: TGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTG...CACACACCTGTCACCTTGTAAAACACGGACATTAGTGTGAACACAGGACAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR TCA 72 bp TGGCTCATGTTTCTCTGCCTGCAGGATTCACGATCCTaGGCCCTCTTACAGGGTCATAGTTCATTTTATCTG +
Preference number: 3 (lower is better)
Translates to: WLMFLCLQDSRS*ALLQGHSSFYL
Trigger: CAGATAAAATGAACTATGACCCTGTAAGAGGGCTCAGGATCGTGAATCCTGCAGGCAGAGAAACATGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR GCA 72 bp GTTAAGGAGCTGACCCAAGATTCCACAGCTAGAAAATaGAGGGACAGATTATGGCTCATGTTTCTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: VKELTQDSTARK*RDRLWLMFLCL
Trigger: CAGGCAGAGAAACATGAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGAATCTTGGGTCAGCTCCTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR CCA 72 bp CAAGATTCCACAGCTAGAAAATGCAGGGACAGATTATaGCTCATGTTTCTCTGCCTGCAGGATTCACGATCC +
Preference number: 3 (lower is better)
Translates to: QDSTARKCRDRL*LMFLCLQDSRS
Trigger: GGATCGTGAATCCTGCAGGCAGAGAAACATGAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR CAA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGCAGAATTCACAATCTaGAGCCCTCTTATAGGGTTG +
Preference number: 3 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLAEFTI*SPLIGL
Trigger: CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGC...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp AATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTTTCATGGGTGCTATCTaGTCTCAAGAAGACACACGT +
Preference number: 3 (lower is better)
Translates to: NIRVWNTWSLPLGTAILVFMGAI*SQEDTR
Trigger: ACGTGTGTCTTCTTGAGACAAGATAGCACCCATGAA...AACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR CAA 90 bp CTATTTCTTCAGCAGAAAGTTCTTTTGGGTCAGGGTAATCCACCAAGATTGTTTCCTCCACCTGATCCTTaGGCCTTTGCAAATGCCTCG +
Preference number: 3 (lower is better)
Translates to: LFLQQKVLLGQGNPPRLFPPPDP*AFANAS
Trigger: CGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGG...AAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528463.5
3UTR-3UTR CAA 90 bp CTGCCAAGACAGCAGGATCCTCGTCTTCATGAAAACAGCAGGAACATGTTTCTGCAGTTTTTCTTGCAGTaGAGCAAGCTCAAAACTGGT +
Preference number: 3 (lower is better)
Translates to: LPRQQDPRLHENSRNMFLQFFLQ*SKLKTG
Trigger: ACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTG...CAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528463.5
3UTR TCA 72 bp TGTTACACCTACCAGGAAGAGTCAGACCTTTGCCCCTaGGTGGTCCCATCTGTAATTACAATAGACCAAACA +
Preference number: 3 (lower is better)
Translates to: CYTYQEESDLCP*VVPSVITIDQT
Trigger: TGTTTGGTCTATTGTAATTACAGATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR TCA 72 bp GTCCTCATCATCTGTAAGCTGATGTTCGTTCACAGGTaGACTATCTGTTACACCTACCAGGAAGAGTCAGAC +
Preference number: 3 (lower is better)
Translates to: VLIICKLMFVHR*TICYTYQEESD
Trigger: GTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGTGAACGAACATCAGCTTACAGATGATGAGGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR TCA 72 bp CCATATAAGGTGCATTGTATGGTTCTCAAAGGCCGTTaGTTCTACAGGCCAAATACACCTCCACTCCTCATC +
Preference number: 3 (lower is better)
Translates to: PYKVHCMVLKGR*FYRPNTPPLLI
Trigger: GATGAGGAGTGGAGGTGTATTTGGCCTGTAGAATCAACGGCCTTTGAGAACCATACAATGCACCTTATATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR TCA 72 bp TTTCCTTCTTTCATGACCCTGGTGATTTCTCGGAGCTaGTGTAGCAACCGTTTCTCTTGGTCAGAAGTCACA +
Preference number: 3 (lower is better)
Translates to: FPSFMTLVISRS*CSNRFSWSEVT
Trigger: TGTGACTTCTGACCAAGAGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528463.5
3UTR GCA 72 bp CCTATGGGCATTCTTACAGACTCAACTCAGACTGCCTaGAGAATTCCTGGGCGAGAAAGAACTCATCTTATT +
Preference number: 3 (lower is better)
Translates to: PMGILTDSTQTA*RIPGRERTHLI
Trigger: AATAAGATGAGTTCTTTCTCGCCCAGGAATTCTGCAGGCAGTCTGAGTTGAGTCTGTAAGAATGCCCATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR CCA 72 bp CAAATATCCGAGTATGGAACACATGGTCTCTACCCCTaGGCACTGCTATATTGGTTCTCTGCAACAGACATA +
Preference number: 3 (lower is better)
Translates to: QISEYGTHGLYP*ALLYWFSATDI
Trigger: TATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CCA 72 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATaGTCTCTACCCCTGGGCACTGCTATATTGGTTCTC +
Preference number: 3 (lower is better)
Translates to: SQKDPNIRVWNT*SLPLGTAILVL
Trigger: GAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGAACTTCCCTCTTGAGTaGGCACTTTGTATACAAGAT +
Preference number: 3 (lower is better)
Translates to: KKTQISEYGTHGLYPWALNFPLE*ALCIQD
Trigger: ATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTT...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp TCCCCAGAGCTAGGAAATATCAGGCTTAATTTCAGGAGGGACAGTTCTGTCTCACCTTACAATGGCTATTaGGAAATCACTGTGCCAATC +
Preference number: 3 (lower is better)
Translates to: SPELGNIRLNFRRDSSVSPYNGY*EITVPI
Trigger: GATTGGCACAGTGATTTCCAAATAGCCATTGTAAGG...TGAGACAGAACTGTCCCTCCTGAAATTAAGCCTGATATTTCCTAGCTCTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR CCA 72 bp TTCCAGTCTTCTACATTTCATGACTGGGAATGTCTTTaGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACA +
Preference number: 3 (lower is better)
Translates to: FQSSTFHDWECL*ECALFELSGLT
Trigger: TGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGTCATGAAATGTAGAAGACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR-3UTR CAA 90 bp CTATTTCTTCAGCAGAAAGTTCTTTTGGGTCAGGGTAATCCACCAAGATTGTTTTCCCATCCTCTGCAGTaGTTTTCCCCTTTGAGAGCT +
Preference number: 3 (lower is better)
Translates to: LFLQQKVLLGQGNPPRLFSHPLQ*FSPLRA
Trigger: AGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGA...AAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000528463.5
3UTR TCA 72 bp ACACTAATGTCCGTGTTTTACAAGGTGACAGGTGTGTaGGCACCAGGAAGGATACATGATATCCATGATAGT +
Preference number: 3 (lower is better)
Translates to: TLMSVFYKVTGV*APGRIHDIHDS
Trigger: ACTATCATGGATATCATGTATCCTTCCTGGTGCTCACACACCTGTCACCTTGTAAAACACGGACATTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR TCA 72 bp CTGCTCAAGGCCCAAAGAATAAGGGATCTTGGAGTCTaGAATCTTCATTCTTGCAACCTTAAGTCCTCATCA +
Preference number: 3 (lower is better)
Translates to: LLKAQRIRDLGV*NLHSCNLKSSS
Trigger: TGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCTTATTCTTTGGGCCTTGAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR TCA 72 bp TGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTaGGTTGGCACTTTGTATACAAGATCAGTCCTCATT +
Preference number: 3 (lower is better)
Translates to: WFSATDILQLPS*VGTLYTRSVLI
Trigger: AATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CCA 72 bp TCTTACAGACTCAACTCAGACTGCCTGCAGAATTCCTaGGCGAGAAAGAACTCATCTTATTTAAGCTTACTC +
Preference number: 3 (lower is better)
Translates to: SYRLNSDCLQNS*ARKNSSYLSLL
Trigger: GAGTAAGCTTAAATAAGATGAGTTCTTTCTCGCCCAGGAATTCTGCAGGCAGTCTGAGTTGAGTCTGTAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR TCA 72 bp CATTCTTGCAACCTTAAGTCCTCATCATCTGTAAGCTaGTGTTCGTTCACAGGTGAACTATCTGTTACACCT +
Preference number: 3 (lower is better)
Translates to: HSCNLKSSSSVS*CSFTGELSVTP
Trigger: AGGTGTAACAGATAGTTCACCTGTGAACGAACATCAGCTTACAGATGATGAGGACTTAAGGTTGCAAGAATG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR TCA 72 bp CACCAAGATTGTTTCTTGCCTACGCTTGATACAGTCTaGAAGGTCATAAATTGGGTAAGTCTCTTCAGGGTA +
Preference number: 3 (lower is better)
Translates to: HQDCFLPTLDTV*KVINWVSLFRV
Trigger: TACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
3UTR TCA 72 bp CAGGGTAATCCACCAAGATTGTTTCTTGCCTACGCTTaGTACAGTCTGAAAGGTCATAAATTGGGTAAGTCT +
Preference number: 3 (lower is better)
Translates to: QGNPPRLFLAYA*YSLKGHKLGKS
Trigger: AGACTTACCCAATTTATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
3UTR GCA 72 bp CTGAATTCACACATACCTCATGATGTAATTCATGGGTaGTATCTTGTCTCAAGAAGACACACGTCAGATGCA +
Preference number: 3 (lower is better)
Translates to: LNSHIPHDVIHG*YLVSRRHTSDA
Trigger: TGCATCTGACGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACATCATGAGGTATGTGTGAATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
3UTR CCA 72 bp CTCTGCAACAGACATACTCCAACTTCCCTCTTGAGTTaGCACTTTGTATACAAGATCAGTCCTCATTTGTTT +
Preference number: 3 (lower is better)
Translates to: LCNRHTPTSLLS*HFVYKISPHLF
Trigger: AAACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR-3UTR CAA 90 bp TCCAACTTCCCTCTTGAGTTGGCACTTTGTATACAAGATCAGTCCTCATTTGTTCTGAAAGGTCATAAATaGGGTAAGTCTCTTCAGGGT +
Preference number: 3 (lower is better)
Translates to: SNFPLELALCIQDQSSFVLKGHK*GKSLQG
Trigger: ACCCTGAAGAGACTTACCCAATTTATGACCTTTCAG...AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526962.1
3UTR TCA 72 bp TTCCTAGCACCTGGCACTGAGCAATTGACTGCTAAATaGATGAATGAGCTAGAAGAGAACAGCAGTATTTAT +
Preference number: 3 (lower is better)
Translates to: FLAPGTEQLTAK*MNELEENSSIY
Trigger: ATAAATACTGCTGTTCTCTTCTAGCTCATTCATTCATTTAGCAGTCAATTGCTCAGTGCCAGGTGCTAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR GCA 72 bp GACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTaGATTGTATGGTTCTCAAAGGCCGTTGATTCTACA +
Preference number: 3 (lower is better)
Translates to: DLKLFDHPSHIR*IVWFSKAVDST
Trigger: TGTAGAATCAACGGCCTTTGAGAACCATACAATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR CCA 72 bp TTATTTGATCACCCAAGCCATATAAGGTGCATTGTATaGTTCTCAAAGGCCGTTGATTCTACAGGCCAAATA +
Preference number: 3 (lower is better)
Translates to: LFDHPSHIRCIV*FSKAVDSTGQI
Trigger: TATTTGGCCTGTAGAATCAACGGCCTTTGAGAACCATACAATGCACCTTATATGGCTTGGGTGATCAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR CCA 72 bp CATTCTTTCAGCTATTTCTTCAGCAGAAAGTTCTTTTaGGTCAGGGTAATCCACCAAGATTGTTTCTTGCCT +
Preference number: 3 (lower is better)
Translates to: HSFSYFFSRKFF*VRVIHQDCFLP
Trigger: AGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATAGCTGAAAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
3UTR-3UTR CAA 90 bp TGTTTGAATTTGGACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTGCATTACCGGACCCATGATTTaGTCATCCTGGGTTGTATAT +
Preference number: 3 (lower is better)
Translates to: CLNLDLKLFDHPSHIRCITGPMI*SSWVVY
Trigger: ATATACAACCCAGGATGACAAAATCATGGGTCCGGT...AATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR-3UTR CAA 90 bp AATATCAGGCTTAATTTCAGGAGGGACAGTTCTGTCTCAGGAGAATTATTGGAGAAGTGGTGTCATTATTaGGCCTTACAATGGCTATTT +
Preference number: 3 (lower is better)
Translates to: NIRLNFRRDSSVSGELLEKWCHY*ALQWLF
Trigger: AAATAGCCATTGTAAGGCCAAATAATGACACCACTT...CTCCAATAATTCTCCTGAGACAGAACTGTCCCTCCTGAAATTAAGCCTGATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR CCA 72 bp AGCAGGATAAAGTGGTGTCATTATTTGGCCTTACAATaGCTATTTGGAAATCACTGTGCCAATCCCAATAAT +
Preference number: 3 (lower is better)
Translates to: SRIKWCHYLALQ*LFGNHCANPNN
Trigger: ATTATTGGGATTGGCACAGTGATTTCCAAATAGCCATTGTAAGGCCAAATAATGACACCACTTTATCCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR-3UTR CAA 90 bp TATTTGGCCTTACAATGGCTATTTGGAAATCACTGTGCCAATCCCAATAATAAAAGTCCTAGTTCTGCCTaGTTAGTTGTGAATTTTGGG +
Preference number: 3 (lower is better)
Translates to: YLALQWLFGNHCANPNNKSPSSA*LVVNFG
Trigger: CCCAAAATTCACAACTAACAAGGCAGAACTAGGACT...TTTATTATTGGGATTGGCACAGTGATTTCCAAATAGCCATTGTAAGGCCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR TCA 72 bp AAACATAATTACCACTTAATGAGTGGTTATCATGTATaGGCTAGAACCAATGCTGTTTTACACACACTGATG +
Preference number: 3 (lower is better)
Translates to: KHNYHLMSGYHV*ARTNAVLHTLM
Trigger: CATCAGTGTGTGTAAAACAGCATTGGTTCTAGCTCATACATGATAACCACTCATTAAGTGGTAATTATGTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCAGGGACAGGAAGGCCTTaGGCAGCAGCAGCGACAGAG +
Preference number: 4 (lower is better)
Translates to: LEPSYRVAASSWQDHPWAGTGRP*AAAATE
Trigger: CTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCC...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CCTAGGAAGACCCTCGCTGCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTGTCTGCTGTGCCGCCTaGAGGGGCTGGTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PRKTLAARKRLQLRQQSLVCCAA*RGWWFL
Trigger: GAGGAACCACCAGCCCCTTCAGGCGGCACAGCAGAC...AAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGCAGCGAGGGTCTTCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp TGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAGGGCAGGGAGTACGCCATGACTaGTCACGGTGGTCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WAGLPAASMASSLDSAGQGVRHD*SRWSQV
Trigger: CACCTGCGACCACCGTGAGCAGTCATGGCGTACTCC...CTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCAAAGGCACCCGGAGACTaGAGAAGGGCCCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSKAPGD*RRALGH
Trigger: GTGGCCCAGGGCCCTTCTGCAGTCTCCGGGTGCCTT...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp CAGGGTAACCTTCCCAGTCCTCCATGTAAGGGGCCTCCTCAGCTTCTTTCTCTGGGGACAGGAAGGCCTTaGGCAGCAGCAGCGACAGAG +
Preference number: 4 (lower is better)
Translates to: QGNLPSPPCKGPPQLLSLGTGRP*AAAATE
Trigger: CTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCC...CAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR CCA 90 bp CCTTTGCAAATGCCTCGGCAAGGTGAGACCTCTGGAAACGAGCCCCAGGAGTCTGGGCTCTGGGGTCAGTaGGCAGACTTTCCCAACCCA +
Preference number: 4 (lower is better)
Translates to: PLQMPRQGETSGNEPQESGLWGQ*ADFPNP
Trigger: TGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCCC...AGACTCCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAGTTGCAGCCTCCTCATaGCAGGACCATCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HPWAGLPAASMASSLDSAVAASS*QDHPWA
Trigger: TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAAC...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCACTGTGGAGTACGCCATaGCTGCTCACGGTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: HRFSPLLLASWPSELLMALWSTP*LLTVVA
Trigger: TGCGACCACCGTGAGCAGTCATGGCGTACTCCACAG...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GGCAGGACCATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGGCTTCCTCTGTCCACTaGAAACCAGGAGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GRTIPGQGFLQLQWPQVLASSVH*KPGVQR
Trigger: CCTTTGCACTCCTGGTTTTCAGTGGACAGAGGAAGC...CAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCACGGTGGTCGCAGGTaGAGACGCCAGCCGGAACCG +
Preference number: 4 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLHGGRR*RRQPEP
Trigger: CGGTTCCGGCTGGCGTCTGCACCTGCGACCACCGTG...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GGCAGGACCATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGCTCCACCTGATCCTTTaGCCTTTGCAAATGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GRTIPGQGFLQLQWPQVLLHLIL*PLQMPR
Trigger: CCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAG...CAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CCA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCAGTTGCAGCCTCCTCATaGCAGGACCATCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSVAASS*QDHPWA
Trigger: TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAAC...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCACTCATCACGACTCCCTaGGCCCAGCTTCTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: HPWAGLPAASMASSLDSALITTP*AQLLEL
Trigger: TAGCTCCAGAAGCTGGGCCCAGGGAGTCGTGATGAG...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAACTGCAGAAGGGCCCTaGGCCACTCCTGGCAATCAG +
Preference number: 4 (lower is better)
Translates to: HRFSPLLLASWPSELLMATAEGP*ATPGNQ
Trigger: CTGATTGCCAGGAGTGGCCCAGGGCCCTTCTGCAGT...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGAATGGCCTCAAGTCTTaGCTCTGCAGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQENGLKS*LCRAGS
Trigger: AGACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATT...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp ATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGAATGGCCTCAAGTCTTaGCTCTGCAGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ILSPLIGLQPPHGRTIPGNGLKS*LCRAGS
Trigger: AGACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATT...CCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GGCAGGACCATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGAAAGACCCAACCACTTaGTGTCTCAGGGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: GRTIPGQGFLQLQWPQVLKDPTT*CLRACL
Trigger: CAAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTT...CAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAAGGGGATCTCCTGGCTaGACCACCCACCTGATTTAC +
Preference number: 4 (lower is better)
Translates to: HPWAGLPAASMASSLDSARGSPG*TTHLIY
Trigger: GTAAATCAGGTGGGTGGTGCAGCCAGGAGATCCCCT...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp ATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGAGGGGATCTCCTGGCTaGACCACCCACCTGATTTAC +
Preference number: 4 (lower is better)
Translates to: ILSPLIGLQPPHGRTIPGRGSPG*TTHLIY
Trigger: GTAAATCAGGTGGGTGGTGCAGCCAGGAGATCCCCT...CCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAAGAAGTCACAGTCTGTaGTCTTCAGGTGTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: HPWAGLPAASMASSLDSARSHSL*SSGVGG
Trigger: GCCGCCGACACCTGAAGAGCACAGACTGTGACTTCT...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526962.1
CDS-3UTR CCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAAAGGGGATCTCCTaGCTGCACCACCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: HRFSPLLLASWPSELLMAGKGIS*LHHPPD
Trigger: ATCAGGTGGGTGGTGCAGCCAGGAGATCCCCTTTCC...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCCGTGTTTTACAAGGTaGCAGGTGTGTGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQEPCFTR*QVCEHQ
Trigger: CTGGTGCTCACACACCTGTCACCTTGTAAAACACGG...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGCAACACTGGACTTaGCAGAGTGGTGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQEQQHWT*QSGDRD
Trigger: ATCCCTGTCACCACTCTGTCAAGTCCAGTGTTGCTG...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCAGTCTGCTGTGCCGCCTaGAGGGGCTGGTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LKKTQISEYGTHGLYPWAVCCAA*RGWWFL
Trigger: GAGGAACCACCAGCCCCTTCAGGCGGCACAGCAGAC...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCAGAATCCAGCATTCTCTaGCAAGACAGCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: LEPSYRVAASSWQDHPWAESSIL*QDSRIL
Trigger: GAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTC...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp GGCAGGACCATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGCATGCTGCCTGTATATaGTTTATCGGTGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: GRTIPGQGFLQLQWPQVLHAACI*FIGADA
Trigger: GGCATCAGCACCGATAAAGCATATACAGGCAGCATG...CAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp GGCTCATTCTCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCCTTCAGGGTCTGCTGTaGCGCCTGAAGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSFSDQWESSLLWRKEDVLQGLL*RLKGLV
Trigger: CACCAGCCCCTTCAGGCGGCACAGCAGACCCTGAAG...GACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp AAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGAACACACGGTGGTCGCAGGTaGAGACGCCAGCCGGAACCG +
Preference number: 4 (lower is better)
Translates to: KTRSAKVLLGLAVLLSRTHGGRR*RRQPEP
Trigger: CGGTTCCGGCTGGCGTCTGCACCTGCGACCACCGTG...TGTTCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp ACTGGGAATGTCTTTGGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTACACGGTGGTCGCAGGTaGAGACGCCAGCCGGAACCG +
Preference number: 4 (lower is better)
Translates to: TGNVFGNVPSSNSQVLHVHGGRR*RRQPEP
Trigger: CGGTTCCGGCTGGCGTCTGCACCTGCGACCACCGTG...TACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CCA 90 bp CTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTGCGAGCCCCAGGAGTCTaGCCATCTGAGGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGTAILVLCNRHTPTSLLRAPGV*PSEGAW
Trigger: CCAGGCACCCTCAGATGGCCAGACTCCTGGGGCTCG...CAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CCA 90 bp GGCAGGACCATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGGGGTGTTTCCAGGCATaGCAGTATAGCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GRTIPGQGFLQLQWPQVLGCFQA*QYSISH
Trigger: ATGGGAAATGCTATACTGCCATGCCTGGAAACACCC...CAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CCA 90 bp ATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCTATTGCTGGCTTCCTaGCCTTCTGAGCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: ILSPLIGLQPPHGRTIPGLLLAS*PSELLM
Trigger: CATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAG...CCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CAA 72 bp GGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTaGCAGCCTCCTCATGGCAGGACCATCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GAEFTILSPLIG*QPPHGRTIPGQ
Trigger: CTGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAATGCCTCGGCAAGGTaGGACCTCTGGAAACGAGCC +
Preference number: 4 (lower is better)
Translates to: GAEFTILSPLIGLQPPHGNASAR*DLWKRA
Trigger: GGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATT...GCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR TCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCAATGCTTTATCGGTGCTaGTGCCCAACCCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LEPSYRVAASSWQDHPWAMLYRC*CPTLHL
Trigger: AAGATGAAGGGTTGGGCATCAGCACCGATAAAGCAT...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCATCAGACCTTTGCCCCTaGGTGGTCCCATCTGTAATT +
Preference number: 4 (lower is better)
Translates to: HPWAGLPAASMASSLDSASDLCP*VVPSVI
Trigger: AATTACAGATGGGACCACTCAGGGGCAAAGGTCTGA...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCGGCTATAGACAGGGGTaGCCCTACGTCCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: GAEFTILSPLIGLQPPHGGYRQG*PYVQDS
Trigger: ACTGTCCTGGACGTAGGGTCACCCCTGTCTATAGCC...GCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp AAAAGGGATGTGTGGCACCCTATGGGCATTCTTACAGACTCAACTCAGACTGCCGGAGTACGCCATGACTaGTCACGGTGGTCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KRDVWHPMGILTDSTQTAGVRHD*SRWSQV
Trigger: CACCTGCGACCACCGTGAGCAGTCATGGCGTACTCC...GGCAGTCTGAGTTGAGTCTGTAAGAATGCCCATAGGGTGCCACACATCCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR GCA 90 bp ATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGTTTGGCCTTTGCAAATaGCTCGGCAAGGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: ILSPLIGLQPPHGRTIPGFGLCK*LGKVRP
Trigger: AGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAA...CCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR GCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCACTCAGGGTAGCTATCTaGACTGAATCCAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: LEPSYRVAASSWQDHPWALRVAI*TESSIL
Trigger: GAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAG...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp TGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAGGGCAGGCTTCCTCAGCATGCTaGCTGTATATGCTTTATCGG +
Preference number: 4 (lower is better)
Translates to: WAGLPAASMASSLDSAGQASSAC*LYMLYR
Trigger: CCGATAAAGCATATACAGGCAGCATGCTGAGGAAGC...CTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCATCTACCCCTGGGCACTaGTATATTGGTTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LEPSYRVAASSWQDHPWASTPGH*YIGSLQ
Trigger: TTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGA...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp TGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAGGGCAGTCTACCCCTGGGCACTaGTATATTGGTTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: WAGLPAASMASSLDSAGQSTPGH*YIGSLQ
Trigger: TTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGA...CTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCAACCTACCACATGCTTTaGCCTGGCACAGACACTTTA +
Preference number: 4 (lower is better)
Translates to: LEPSYRVAASSWQDHPWATYHML*PGTDTL
Trigger: TAAAGTGTCTGTGCCAGGGCAAAGCATGTGGTAGGT...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGAAGGCACCCGGAGACTaGAGAAGGGCCCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLKAPGD*RRALGH
Trigger: GTGGCCCAGGGCCCTTCTGCAGTCTCCGGGTGCCTT...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTTCAGGGTCTGCTGTaGCGCCTGAAGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LKKTQISEYGTHGLYPWALQGLL*RLKGLV
Trigger: CACCAGCCCCTTCAGGCGGCACAGCAGACCCTGAAG...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCATGACTGCTCACGGTaGTCGCAGGTGCAGACGCCA +
Preference number: 4 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPHDCSR*SQVQTP
Trigger: TGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATG...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTGGGACAGGAAGGCCTTaGGCAGCAGCAGCGACAGAG +
Preference number: 4 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSGTGRP*AAAATE
Trigger: CTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCC...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCAGGGACAGGAAGGCCTTaGGCAGCAGCAGCGACAGAG +
Preference number: 4 (lower is better)
Translates to: LKKTQISEYGTHGLYPWAGTGRP*AAAATE
Trigger: CTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCC...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp AAGCTGTCCTGTGTTCACACTAATGTCCGTGTTTTACAAGGTGACAGGTGTGTGCGAGCCCCAGGAGTCTaGCCATCTGAGGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: KLSCVHTNVRVLQGDRCVRAPGV*PSEGAW
Trigger: CCAGGCACCCTCAGATGGCCAGACTCCTGGGGCTCG...CACACACCTGTCACCTTGTAAAACACGGACATTAGTGTGAACACAGGACAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CCA 90 bp ACTGGTAATTTTCCTGTGGGTGTTTCCAGGCATGGCAGTATAGCATTTCCCATCCGAGCCCCAGGAGTCTaGCCATCTGAGGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TGNFPVGVSRHGSIAFPIRAPGV*PSEGAW
Trigger: CCAGGCACCCTCAGATGGCCAGACTCCTGGGGCTCG...GATGGGAAATGCTATACTGCCATGCCTGGAAACACCCACAGGAAAATTACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CCA 90 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCTGGCAGGACCATCCCTaGGCAGGGCTTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SQKDPNIRVWNTWSLPLGWQDHP*AGLPAA
Trigger: AGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCCA...GCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GCAGAGTCTTACCCTCCTCTGGGCCCATTAGCCCCACAAACAAAATGTTCTCTTGTTGCAGCCTCCTCATaGCAGGACCATCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: AESYPPLGPLAPQTKCSLVAASS*QDHPWA
Trigger: TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAAC...AAGAGAACATTTTGTTTGTGGGGCTAATGGGCCCAGAGGAGGGTAAGACTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CCTAGGAAGACCCTCGCTGCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTCTATTGCTGGCTTCCTaGCCTTCTGAGCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: PRKTLAARKRLQLRQQSLLLLAS*PSELLM
Trigger: CATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAG...AAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGCAGCGAGGGTCTTCCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCACATGGTCTCTACCCCTaGGCACTGCTATATTGGTTC +
Preference number: 4 (lower is better)
Translates to: HPWAGLPAASMASSLDSAHGLYP*ALLYWF
Trigger: GAACCAATATAGCAGTGCCCAGGGGTAGAGACCATG...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GGCAGGACCATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGCCAAATATCCGAGTATaGAACACATGGTCTCTACCC +
Preference number: 4 (lower is better)
Translates to: GRTIPGQGFLQLQWPQVLPNIRV*NTWSLP
Trigger: GGGTAGAGACCATGTGTTCCATACTCGGATATTTGG...CAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCGGAAAGGGGATCTCCTaGCTGCACCACCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: GAEFTILSPLIGLQPPHGGKGIS*LHHPPD
Trigger: ATCAGGTGGGTGGTGCAGCCAGGAGATCCCCTTTCC...GCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp ATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCACTGCAGAAGGGCCCTaGGCCACTCCTGGCAATCAG +
Preference number: 4 (lower is better)
Translates to: MVSTPGHCYIGSLQQTYSTAEGP*ATPGNQ
Trigger: CTGATTGCCAGGAGTGGCCCAGGGCCCTTCTGCAGT...GGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGTGGAGTACGCCATaGCTGCTCACGGTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: LKKTQISEYGTHGLYPWALWSTP*LLTVVA
Trigger: TGCGACCACCGTGAGCAGTCATGGCGTACTCCACAG...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp ACAGGTGAACTATCTGTTACACCTACCAGGAAGAGTCAGACCTTTGCCCCTGAGAATGCCTCGGCAAGGTaGGACCTCTGGAAACGAGCC +
Preference number: 4 (lower is better)
Translates to: TGELSVTPTRKSQTFAPENASAR*DLWKRA
Trigger: GGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATT...CTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR TCA 90 bp GCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTACCCTCCTCTGGGCCCATGTGATTTCTCGGAGCTaGTGTAGCAACCGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ARKRLQLRQQSLTLLWAHVISRS*CSNRFS
Trigger: AGAGAAACGGTTGCTACATCAGCTCCGAGAAATCAC...ATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp ATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGATGCTTTATCGGTGCTaGTGCCCAACCCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: ILSPLIGLQPPHGRTIPGMLYRC*CPTLHL
Trigger: AAGATGAAGGGTTGGGCATCAGCACCGATAAAGCAT...CCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CAGGGTAACCTTCCCAGTCCTCCATGTAAGGGGCCTCCTCAGCTTCTTTCTCTGTCAGACCTTTGCCCCTaGGTGGTCCCATCTGTAATT +
Preference number: 4 (lower is better)
Translates to: QGNLPSPPCKGPPQLLSLSDLCP*VVPSVI
Trigger: AATTACAGATGGGACCACTCAGGGGCAAAGGTCTGA...CAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526962.1
CDS-3UTR TCA 90 bp CGGGCAGCTGTGGCAGATTTGAAGGCAAAAGGAAGGGAGGCTACAGTTGTAGCTGCTTCCTCTGTCCACTaGAAACCAGGAGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RAAVADLKAKGREATVVAASSVH*KPGVQR
Trigger: CCTTTGCACTCCTGGTTTTCAGTGGACAGAGGAAGC...AGCTACAACTGTAGCCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp GGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCGCTGCACCACCCACCTaGTTTACCAAGAGTGATCCC +
Preference number: 4 (lower is better)
Translates to: GAEFTILSPLIGLQPPHGAAPPT*FTKSDP
Trigger: GGGATCACTCTTGGTAAATCAGGTGGGTGGTGCAGC...GCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAAGAGCATTTCCTACCTaGACCATGGCCTATCTCCTG +
Preference number: 4 (lower is better)
Translates to: HRFSPLLLASWPSELLMARAFPT*TMAYLL
Trigger: CAGGAGATAGGCCATGGTTCAGGTAGGAAATGCTCT...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp AAGGAGCTGACCCAAGATTCCACAGCTAGAAAATGCAGGGACAGATTATGGCTCGGAGTACGCCATGACTaGTCACGGTGGTCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KELTQDSTARKCRDRLWLGVRHD*SRWSQV
Trigger: CACCTGCGACCACCGTGAGCAGTCATGGCGTACTCC...GAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGAATCTTGGGTCAGCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGAGGAGTACGCCATGACTaGTCACGGTGGTCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRGVRHD*SRWSQV
Trigger: CACCTGCGACCACCGTGAGCAGTCATGGCGTACTCC...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCAGAATCCAGCATTCTCTaGCAAGACAGCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSESSIL*QDSRIL
Trigger: GAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTC...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp CAGGGTAACCTTCCCAGTCCTCCATGTAAGGGGCCTCCTCAGCTTCTTTCTCTGGAATCCAGCATTCTCTaGCAAGACAGCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: QGNLPSPPCKGPPQLLSLESSIL*QDSRIL
Trigger: GAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTC...CAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR GCA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGGCTTCCTCAGCATGCTaGCTGTATATGCTTTATCGG +
Preference number: 4 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQEASSAC*LYMLYR
Trigger: CCGATAAAGCATATACAGGCAGCATGCTGAGGAAGC...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp GCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTACCCTCCTCTGGGCCCATGCTTCCTCAGCATGCTaGCTGTATATGCTTTATCGG +
Preference number: 4 (lower is better)
Translates to: ARKRLQLRQQSLTLLWAHASSAC*LYMLYR
Trigger: CCGATAAAGCATATACAGGCAGCATGCTGAGGAAGC...ATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp GGCAGGACCATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGTACGCTTCCTCAGCATaGTGCCTGTATATGCTTTAT +
Preference number: 4 (lower is better)
Translates to: GRTIPGQGFLQLQWPQVLYASSA*CLYMLY
Trigger: ATAAAGCATATACAGGCAGCATGCTGAGGAAGCGTA...CAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp TGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAGGGCAGAAGACACACGTCAGATaGAGTAAGGAGAAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: WAGLPAASMASSLDSAGQKTHVR*SKEKRP
Trigger: AGGCCTTTTCTCCTTACTGCATCTGACGTGTGTCTT...CTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR GCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAATGACTTGTGTACTCTaGCACAGTGCCAAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HPWAGLPAASMASSLDSAMTCVL*HSAKRP
Trigger: TGGCCTTTTGGCACTGTGGCAGAGTACACAAGTCAT...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCATGACTGCTCACGGTaGTCGCAGGTGCAGACGCCA +
Preference number: 4 (lower is better)
Translates to: KKTQISEYGTHGLYPWALHDCSR*SQVQTP
Trigger: TGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATG...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp ACAGGTCATCTTCCTTGCTCATGCTCATCTAAAAGGGATGTGTGGCACCCTATGCATGACTGCTCACGGTaGTCGCAGGTGCAGACGCCA +
Preference number: 4 (lower is better)
Translates to: TGHLPCSCSSKRDVWHPMHDCSR*SQVQTP
Trigger: TGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATG...CATAGGGTGCCACACATCCCTTTTAGATGAGCATGAGCAAGGAAGATGACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGGACAGGAAGGCCTTaGGCAGCAGCAGCGACAGAG +
Preference number: 4 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLGTGRP*AAAATE
Trigger: CTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCC...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GGCAGGACCATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGAGCAGAAAGTTCTTTTaGGTCAGGGTAATCCACCAA +
Preference number: 4 (lower is better)
Translates to: GRTIPGQGFLQLQWPQVLSRKFF*VRVIHQ
Trigger: TTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCT...CAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCAGGGCTCTGGGGTCAGTaGGCAGACTTTCCCAACCCA +
Preference number: 4 (lower is better)
Translates to: LKKTQISEYGTHGLYPWAGLWGQ*ADFPNP
Trigger: TGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCCC...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGAGGGCTCTGGGGTCAGTaGGCAGACTTTCCCAACCCA +
Preference number: 4 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRGLWGQ*ADFPNP
Trigger: TGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCCC...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGGCAGGAACATGTTTCTaGCTTTGGATCACACGAGGT +
Preference number: 4 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQEAGTCF*LWITRG
Trigger: ACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGC...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCATTTCACTCTAAACCCTaGGGGTTACGCTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSFHSKP*GLRFLS
Trigger: GCTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAA...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CAGGGTAACCTTCCCAGTCCTCCATGTAAGGGGCCTCCTCAGCTTCTTTCTCTGTTTCACTCTAAACCCTaGGGGTTACGCTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QGNLPSPPCKGPPQLLSLFHSKP*GLRFLS
Trigger: GCTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAA...CAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR CCA 90 bp ATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGTCATTCTCAGATCAGTaGGAGTCTTCCCTACTCTGG +
Preference number: 4 (lower is better)
Translates to: ILSPLIGLQPPHGRTIPGSFSDQ*ESSLLW
Trigger: CCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGA...CCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTACCCTCCTCTGGGCCCATTCATTCTCAGATCAGTaGGAGTCTTCCCTACTCTGG +
Preference number: 4 (lower is better)
Translates to: ARKRLQLRQQSLTLLWAHSFSDQ*ESSLLW
Trigger: CCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGA...ATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTACCCTCCTCTGGGCCCATTTCCTGCAGCTTCAATaGCCTCAAGTCTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: ARKRLQLRQQSLTLLWAHFLQLQ*PQVLTL
Trigger: CAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAA...ATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCACCAAATATCCGAGTATaGAACACATGGTCTCTACCC +
Preference number: 4 (lower is better)
Translates to: LEPSYRVAASSWQDHPWAPNIRV*NTWSLP
Trigger: GGGTAGAGACCATGTGTTCCATACTCGGATATTTGG...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp ACAGGTGAACTATCTGTTACACCTACCAGGAAGAGTCAGACCTTTGCCCCTGAGCTCATCACGACTCCCTaGGCCCAGCTTCTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: TGELSVTPTRKSQTFAPELITTP*AQLLEL
Trigger: TAGCTCCAGAAGCTGGGCCCAGGGAGTCGTGATGAG...CTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp AAAAGGGATGTGTGGCACCCTATGGGCATTCTTACAGACTCAACTCAGACTGCCCTGCAAAGGCCTGCCTaGAGGTGGAACTCAACTGGG +
Preference number: 4 (lower is better)
Translates to: KRDVWHPMGILTDSTQTALQRPA*RWNSTG
Trigger: CCCAGTTGAGTTCCACCTCCAGGCAGGCCTTTGCAG...GGCAGTCTGAGTTGAGTCTGTAAGAATGCCCATAGGGTGCCACACATCCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR CAA 72 bp TCTGAGCTCCTCATGGCAGGAGCAGAATTCACAATCTaGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGC +
Preference number: 4 (lower is better)
Translates to: SELLMAGAEFTI*SPLIGLQPPHG
Trigger: GCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGCTGTGGAGTACGCCATaGCTGCTCACGGTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLLWSTP*LLTVVA
Trigger: TGCGACCACCGTGAGCAGTCATGGCGTACTCCACAG...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp AATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTGTGGAGTACGCCATaGCTGCTCACGGTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: NIRVWNTWSLPLGTAILVLWSTP*LLTVVA
Trigger: TGCGACCACCGTGAGCAGTCATGGCGTACTCCACAG...AACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CTGCCAAGACAGCAGGATCCTCGTCTTCATGAAAACAGCAGGAACATGTTTCTGAATGCCTCGGCAAGGTaGGACCTCTGGAAACGAGCC +
Preference number: 4 (lower is better)
Translates to: LPRQQDPRLHENSRNMFLNASAR*DLWKRA
Trigger: GGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATT...CAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR TCA 90 bp GGCACCCTATGGGCATTCTTACAGACTCAACTCAGACTGCCTGCAGAATTCCTGTCCAGCACCTCCACCTaGTCCTTTGGCCTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: GTLWAFLQTQLRLPAEFLSSTST*SFGLCK
Trigger: TTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGA...CAGGAATTCTGCAGGCAGTCTGAGTTGAGTCTGTAAGAATGCCCATAGGGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR TCA 90 bp AAATGCCTCGGCAAGGTGAGACCTCTGGAAACGAGCCCCAGGAGTCTGGCCATCCTTTCCCAACCCAAATaGTCTGATTCTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KCLGKVRPLETSPRSLAILSQPK*SDSSSS
Trigger: AGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAG...GATGGCCAGACTCCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR TCA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCTCCAACTTCCCTCTTaGGTTGGCACTTTGTATACA +
Preference number: 4 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQELQLPS*VGTLYT
Trigger: TGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAG...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp ATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCTCCAACTTCCCTCTTaGGTTGGCACTTTGTATACA +
Preference number: 4 (lower is better)
Translates to: ILSPLIGLQPPHGRTIPGLQLPS*VGTLYT
Trigger: TGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAG...CCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCACTCCCTTTACTACCCTaGAGCCAAAGCTCAGACCAG +
Preference number: 4 (lower is better)
Translates to: GRSRIHNLEPSYRVAASSLPLLP*SQSSDQ
Trigger: CTGGTCTGAGCTTTGGCTTCAGGGTAGTAAAGGGAG...TGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCACACCCTCGTGAGAAATaGAGACCGCAAGAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSHPREK*RPQEKR
Trigger: TCTCTTTTCTTGCGGTCTTCATTTCTCACGAGGGTG...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGGGCTATAGACAGGGGTaGCCCTACGTCCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: KKTQISEYGTHGLYPWALGYRQG*PYVQDS
Trigger: ACTGTCCTGGACGTAGGGTCACCCCTGTCTATAGCC...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCAGCCAGAGCGACTCTCTaGACTGTGGAGTACGCCATG +
Preference number: 4 (lower is better)
Translates to: LKKTQISEYGTHGLYPWAARATL*TVEYAM
Trigger: CATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGC...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp CGGGCAGCTGTGGCAGATTTGAAGGCAAAAGGAAGGGAGGCTACAGTTGTAGCTTTTGGCCTTTGCAAATaGCTCGGCAAGGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: RAAVADLKAKGREATVVAFGLCK*LGKVRP
Trigger: AGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAA...AGCTACAACTGTAGCCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309737.11
CDS-3UTR GCA 90 bp CGGGCAGCTGTGGCAGATTTGAAGGCAAAAGGAAGGGAGGCTACAGTTGTAGCTGAATCCAGCATTCTCTaGCAAGACAGCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: RAAVADLKAKGREATVVAESSIL*QDSRIL
Trigger: GAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTC...AGCTACAACTGTAGCCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCACATGCTGCCTGTATATaGTTTATCGGTGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: HRFSPLLLASWPSELLMAHAACI*FIGADA
Trigger: GGCATCAGCACCGATAAAGCATATACAGGCAGCATG...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAACCTACCACATGCTTTaGCCTGGCACAGACACTTTA +
Preference number: 4 (lower is better)
Translates to: HRFSPLLLASWPSELLMATYHML*PGTDTL
Trigger: TAAAGTGTCTGTGCCAGGGCAAAGCATGTGGTAGGT...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp ACTGGGAATGTCTTTGGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTACATGACTGCTCACGGTaGTCGCAGGTGCAGACGCCA +
Preference number: 4 (lower is better)
Translates to: TGNVFGNVPSSNSQVLHVHDCSR*SQVQTP
Trigger: TGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATG...TACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGCATGACTGCTCACGGTaGTCGCAGGTGCAGACGCCA +
Preference number: 4 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLHDCSR*SQVQTP
Trigger: TGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATG...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCCCAAAACCGTAGATTaGAATAATCTGCCCCATCAG +
Preference number: 4 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQEPKTVD*NNLPHQ
Trigger: CTGATGGGGCAGATTATTCCAATCTACGGTTTTGGG...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CCA 90 bp AAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGAACAGGGCTCTGGGGTCAGTaGGCAGACTTTCCCAACCCA +
Preference number: 4 (lower is better)
Translates to: KTRSAKVLLGLAVLLSRTGLWGQ*ADFPNP
Trigger: TGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCCC...TGTTCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCAACCACTCTTCTTTGGTaGTTTCCTCTTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSTTLLW*FPLAQG
Trigger: ACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGT...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAAGAGAGAGGTCACCTTaGGACTTGAGTAATGGATAC +
Preference number: 4 (lower is better)
Translates to: HPWAGLPAASMASSLDSARERSP*DLSNGY
Trigger: GTATCCATTACTCAAGTCCCAAGGTGACCTCTCTCT...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTACCCTCCTCTGGGCCCATAGAGAGAGGTCACCTTaGGACTTGAGTAATGGATAC +
Preference number: 4 (lower is better)
Translates to: ARKRLQLRQQSLTLLWAHRERSP*DLSNGY
Trigger: GTATCCATTACTCAAGTCCCAAGGTGACCTCTCTCT...ATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCCTATTGCTGGCTTCCTaGCCTTCTGAGCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: GAEFTILSPLIGLQPPHGLLLAS*PSELLM
Trigger: CATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAG...GCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTGGCCTCTGCCTCTGGTaGGAAATAGCGCATACAGGA +
Preference number: 4 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPGLCLW*EIAHTG
Trigger: TCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCC...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCACTTTCCCAACCCAAATaGTCTGATTCTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HPWAGLPAASMASSLDSALSQPK*SDSSSS
Trigger: AGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAG...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCGCCAAGAAGGAAATCTaGGGAGAGAGAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: GAEFTILSPLIGLQPPHGAKKEI*GERGHL
Trigger: AAGGTGACCTCTCTCTCCTCAGATTTCCTTCTTGGC...GCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCCGTGTTTTACAAGGTaGCAGGTGTGTGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLPCFTR*QVCEHQ
Trigger: CTGGTGCTCACACACCTGTCACCTTGTAAAACACGG...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp ACAGGTGAACTATCTGTTACACCTACCAGGAAGAGTCAGACCTTTGCCCCTGAGCCGTGTTTTACAAGGTaGCAGGTGTGTGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: TGELSVTPTRKSQTFAPEPCFTR*QVCEHQ
Trigger: CTGGTGCTCACACACCTGTCACCTTGTAAAACACGG...CTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGAGGGATCTTGGAGTCTaGAATCTTCATTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQERDLGV*NLHSCN
Trigger: GTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCT...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CCTAGGAAGACCCTCGCTGCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTAGAAAAGAGGATGTCTaGGGCAGCATCAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: PRKTLAARKRLQLRQQSLRKEDV*GSINVP
Trigger: AGGAACATTGATGCTGCCTCAGACATCCTCTTTTCT...AAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGCAGCGAGGGTCTTCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCAAAAAGGCCAGGGGACTaGTCAAGTTCCCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: LKKTQISEYGTHGLYPWAKRPGD*SSSQHP
Trigger: AGGGTGCTGGGAACTTGATCAGTCCCCTGGCCTTTT...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCACTGATTTACCAAGAGTaGTCCCAGATTATGCAGTTG +
Preference number: 4 (lower is better)
Translates to: HPWAGLPAASMASSLDSALIYQE*SQIMQL
Trigger: CAACTGCATAATCTGGGATCACTCTTGGTAAATCAG...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp ATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAGAGGGTGTCAGGTGTaGCATCTCAGCAACACTGGA +
Preference number: 4 (lower is better)
Translates to: MVSTPGHCYIGSLQQTYSRGCQV*HLSNTG
Trigger: TCCAGTGTTGCTGAGATGTCACACCTGACACCCTCT...GGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp ACAGGTGAACTATCTGTTACACCTACCAGGAAGAGTCAGACCTTTGCCCCTGAGAGAGGGTGTCAGGTGTaGCATCTCAGCAACACTGGA +
Preference number: 4 (lower is better)
Translates to: TGELSVTPTRKSQTFAPERGCQV*HLSNTG
Trigger: TCCAGTGTTGCTGAGATGTCACACCTGACACCCTCT...CTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp GGCAGGACCATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGGATGTAATTCATGGGTaGTATCTTGTCTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GRTIPGQGFLQLQWPQVLDVIHG*YLVSRR
Trigger: TCTTCTTGAGACAAGATAGCACCCATGAATTACATC...CAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR GCA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTAAGAAGTTCTTTGCATaGCTCAAGGCCCACCTCCCA +
Preference number: 4 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLKKFFA*LKAHLP
Trigger: TGGGAGGTGGGCCTTGAGGCATGCAAAGAACTTCTT...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp AAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTACAAGCACCTACCACATaGTTTGCCCTGGCACAGACA +
Preference number: 4 (lower is better)
Translates to: KTQISEYGTHGLYPWALLQAPTT*FALAQT
Trigger: TGTCTGTGCCAGGGCAAAGCATGTGGTAGGTGCTTG...TAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp ATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGCAAGCACCTACCACATaGTTTGCCCTGGCACAGACA +
Preference number: 4 (lower is better)
Translates to: MEHMVSTPGHCYIGSLQQQAPTT*FALAQT
Trigger: TGTCTGTGCCAGGGCAAAGCATGTGGTAGGTGCTTG...CTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp CCTTTGCAAATGCCTCGGCAAGGTGAGACCTCTGGAAACGAGCCCCAGGAGTCTATGATGCATCATAGGTaGAAATCGGCCCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: PLQMPRQGETSGNEPQESMMHHR*KSAQFS
Trigger: GGAAAATTGGGCCGATTTCCACCTATGATGCATCAT...AGACTCCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CCA 90 bp ACAGGTGAACTATCTGTTACACCTACCAGGAAGAGTCAGACCTTTGCCCCTGAGCTCCACCTGATCCTTTaGCCTTTGCAAATGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TGELSVTPTRKSQTFAPELHLIL*PLQMPR
Trigger: CCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAG...CTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CCA 90 bp GCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTACCCTCCTCTGGGCCCATAGCAGAAAGTTCTTTTaGGTCAGGGTAATCCACCAA +
Preference number: 4 (lower is better)
Translates to: ARKRLQLRQQSLTLLWAHSRKFF*VRVIHQ
Trigger: TTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCT...ATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CGGGCAGCTGTGGCAGATTTGAAGGCAAAAGGAAGGGAGGCTACAGTTGTAGCTACCACTCTTCTTTGGTaGTTTCCTCTTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: RAAVADLKAKGREATVVATTLLW*FPLAQG
Trigger: ACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGT...AGCTACAACTGTAGCCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp CTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTGTCTCTCCCCTATTGCTaGCTTCCTGGCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LGTAILVLCNRHTPTSLLSLPYC*LPGLLS
Trigger: GCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGA...CAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGTGGGCACTGCTATATTaGTTCTCTGCAACAGACATA +
Preference number: 4 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQEWALLY*FSATDI
Trigger: TATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCA...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTAAGAGACAGCAGCCCTaGCAACAAAAACCGGACCCA +
Preference number: 4 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPKRQQP*QQKPDP
Trigger: TGGGTCCGGTTTTTGTTGCCAGGGCTGCTGTCTCTT...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGTGTGGCCTCTGCCTCTaGTGGGAAATAGCGCATACA +
Preference number: 4 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLCGLCL*WEIAHT
Trigger: TGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACA...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp CTCAACTCAGACTGCCTGCAGAATTCCTGGGCGAGAAAGAACTCATCTTATTTAAGGCCTGCCTGGAGGTaGAACTCAACTGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LNSDCLQNSWARKNSSYLRPAWR*NSTGGL
Trigger: CAGACCCCCAGTTGAGTTCCACCTCCAGGCAGGCCT...TAAATAAGATGAGTTCTTTCTCGCCCAGGAATTCTGCAGGCAGTCTGAGTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR TCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTTCCAGCACCTCCACCTaGTCCTTTGGCCTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSSSTST*SFGLCK
Trigger: TTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGA...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR TCA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGATCCAGCACCTCCACCTaGTCCTTTGGCCTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRSSTST*SFGLCK
Trigger: TTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGA...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR TCA 90 bp CCTAGGAAGACCCTCGCTGCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTCTTTCCCAACCCAAATaGTCTGATTCTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PRKTLAARKRLQLRQQSLLSQPK*SDSSSS
Trigger: AGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAG...AAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGCAGCGAGGGTCTTCCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CTCTTGCTCAGGGTAGCTATCTGCACTGAATCCAGCATTCTCTGCCAAGACAGCATGCTTTATCGGTGCTaGTGCCCAACCCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LLLRVAICTESSILCQDSMLYRC*CPTLHL
Trigger: AAGATGAAGGGTTGGGCATCAGCACCGATAAAGCAT...GCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR TCA 90 bp GGCTCATTCTCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCTCAGACCTTTGCCCCTaGGTGGTCCCATCTGTAATT +
Preference number: 4 (lower is better)
Translates to: GSFSDQWESSLLWRKEDVSDLCP*VVPSVI
Trigger: AATTACAGATGGGACCACTCAGGGGCAAAGGTCTGA...GACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CCTAGGAAGACCCTCGCTGCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTAGGGATCTTGGAGTCTaGAATCTTCATTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: PRKTLAARKRLQLRQQSLRDLGV*NLHSCN
Trigger: GTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCT...AAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGCAGCGAGGGTCTTCCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTGACCAGTTAAGGAGCTaGCCCAAGATTCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPDQLRS*PKIPQL
Trigger: TAGCTGTGGAATCTTGGGTCAGCTCCTTAACTGGTC...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTGTTCCCAGCACCCTCGTaGGAAATGAAGACCGCAAGA +
Preference number: 4 (lower is better)
Translates to: LGTAILVLCNRHTPTSLLFPAPS*EMKTAR
Trigger: TCTTGCGGTCTTCATTTCTCACGAGGGTGCTGGGAA...CAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp AAGGAGCTGACCCAAGATTCCACAGCTAGAAAATGCAGGGACAGATTATGGCTCTTTGTGCTCCTGTTGTaGCCAGGAAAGGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: KELTQDSTARKCRDRLWLFVLLL*PGKGIS
Trigger: GGAGATCCCCTTTCCTGGTCACAACAGGAGCACAAA...GAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGAATCTTGGGTCAGCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGACAGCTGTGGCAGATTTaGAGGCAAAAGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRQLWQI*RQKEGR
Trigger: CCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTG...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTAAAGACCCAACCACTTaGTGTCTCAGGGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPKDPTT*CLRACL
Trigger: CAAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTT...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp ATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGACCAAGATTGTTTCTTaGCTACGCTTGATACAGTCT +
Preference number: 4 (lower is better)
Translates to: ILSPLIGLQPPHGRTIPGTKIVS*LRLIQS
Trigger: AGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGT...CCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp GGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCCATGCTGCCTGTATATaGTTTATCGGTGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: GAEFTILSPLIGLQPPHGHAACI*FIGADA
Trigger: GGCATCAGCACCGATAAAGCATATACAGGCAGCATG...GCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp CTCTTGCTCAGGGTAGCTATCTGCACTGAATCCAGCATTCTCTGCCAAGACAGCCATGCTGCCTGTATATaGTTTATCGGTGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: LLLRVAICTESSILCQDSHAACI*FIGADA
Trigger: GGCATCAGCACCGATAAAGCATATACAGGCAGCATG...GCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR GCA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCATACGCTTCCTCAGCATaGTGCCTGTATATGCTTTAT +
Preference number: 4 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSYASSA*CLYMLY
Trigger: ATAAAGCATATACAGGCAGCATGCTGAGGAAGCGTA...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp GCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTACCCTCCTCTGGGCCCATATAATGGTTTCTTTGTaGTCCTGTTGTGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: ARKRLQLRQQSLTLLWAHIMVSL*SCCDQE
Trigger: TTCCTGGTCACAACAGGAGCACAAAGAAACCATTAT...ATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCAGACAGTCTTAGTTTATaGCTATCACCTTGGCATAAT +
Preference number: 4 (lower is better)
Translates to: LEPSYRVAASSWQDHPWADSLSL*LSPWHN
Trigger: ATTATGCCAAGGTGATAGGCATAAACTAAGACTGTC...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp TCAAATTCCTGTGGAGAAACAAGCAGGATAAAGTGGTGTCATTATTTGGCCTTACGAGCCCCAGGAGTCTaGCCATCTGAGGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SNSCGETSRIKWCHYLALRAPGV*PSEGAW
Trigger: CCAGGCACCCTCAGATGGCCAGACTCCTGGGGCTCG...TAAGGCCAAATAATGACACCACTTTATCCTGCTTGTTTCTCCACAGGAATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAAGCAGAAAGTTCTTTTaGGTCAGGGTAATCCACCAA +
Preference number: 4 (lower is better)
Translates to: HRFSPLLLASWPSELLMASRKFF*VRVIHQ
Trigger: TTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCT...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CTCTTGCTCAGGGTAGCTATCTGCACTGAATCCAGCATTCTCTGCCAAGACAGCACCACTCTTCTTTGGTaGTTTCCTCTTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LLLRVAICTESSILCQDSTTLLW*FPLAQG
Trigger: ACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGT...GCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR CCA 90 bp GGCTCATTCTCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCTTTCACTCTAAACCCTaGGGGTTACGCTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GSFSDQWESSLLWRKEDVFHSKP*GLRFLS
Trigger: GCTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAA...GACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTGCTATTGCTGGCTTCCTaGCCTTCTGAGCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: LGTAILVLCNRHTPTSLLLLLAS*PSELLM
Trigger: CATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAG...CAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp AAGCTGTCCTGTGTTCACACTAATGTCCGTGTTTTACAAGGTGACAGGTGTGTGTCTCTCCCCTATTGCTaGCTTCCTGGCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: KLSCVHTNVRVLQGDRCVSLPYC*LPGLLS
Trigger: GCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGA...CACACACCTGTCACCTTGTAAAACACGGACATTAGTGTGAACACAGGACAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTACCCTCCTCTGGGCCCATACTTCCCTCTTGAGTTaGCACTTTGTATACAAGATC +
Preference number: 4 (lower is better)
Translates to: ARKRLQLRQQSLTLLWAHTSLLS*HFVYKI
Trigger: GATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGT...ATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCATGGGCACTGCTATATTaGTTCTCTGCAACAGACATA +
Preference number: 4 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSWALLY*FSATDI
Trigger: TATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCA...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp ATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGCATGGTCTCTACCCCTaGGCACTGCTATATTGGTTC +
Preference number: 4 (lower is better)
Translates to: MEHMVSTPGHCYIGSLQQHGLYP*ALLYWF
Trigger: GAACCAATATAGCAGTGCCCAGGGGTAGAGACCATG...CTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CTATCTGCACTGAATCCAGCATTCTCTGCCAAGACAGCAGGATCCTCGTCTTCACATGGTCTCTACCCCTaGGCACTGCTATATTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSALNPAFSAKTAGSSSSHGLYP*ALLYWF
Trigger: GAACCAATATAGCAGTGCCCAGGGGTAGAGACCATG...TGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526962.1
CDS-3UTR CCA 90 bp CCTTTGCAAATGCCTCGGCAAGGTGAGACCTCTGGAAACGAGCCCCAGGAGTCTAACCGTCAAATCCAATaGCTTTTTGTCAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: PLQMPRQGETSGNEPQESNRQIQ*LFVSSH
Trigger: GTGAGAACTGACAAAAAGCCATTGGATTTGACGGTT...AGACTCCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528463.5
3UTR CAA 72 bp TGGAACACATGGTCTCTACCCCTGGGCACTGCTATATaGGTTCTCTGCAACAGACATACTCCAACTTCCCTC +
Preference number: 4 (lower is better)
Translates to: WNTWSLPLGTAI*VLCNRHTPTSL
Trigger: GAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp ACTGGTAATTTTCCTGTGGGTGTTTCCAGGCATGGCAGTATAGCATTTCCCATCTCCAGCACCTCCACCTaGTCCTTTGGCCTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: TGNFPVGVSRHGSIAFPISSTST*SFGLCK
Trigger: TTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGA...GATGGGAAATGCTATACTGCCATGCCTGGAAACACCCACAGGAAAATTACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR TCA 90 bp GGGTGCCTGGTGATGATGCATCATAGGTGGAAATCGGCCCAATTTTCCTTAACCGTGATTTCTCGGAGCTaGTGTAGCAACCGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GCLVMMHHRWKSAQFSLTVISRS*CSNRFS
Trigger: AGAGAAACGGTTGCTACATCAGCTCCGAGAAATCAC...GGTTAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR TCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCAGCCAAGAAGGAAATCTaGGGAGAGAGAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: LKKTQISEYGTHGLYPWAAKKEI*GERGHL
Trigger: AAGGTGACCTCTCTCTCCTCAGATTTCCTTCTTGGC...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp AATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCCGTGTTTTACAAGGTaGCAGGTGTGTGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: NIRVWNTWSLPLGTAILVPCFTR*QVCEHQ
Trigger: CTGGTGCTCACACACCTGTCACCTTGTAAAACACGG...AACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTGTCAGACCTTTGCCCCTaGGTGGTCCCATCTGTAATT +
Preference number: 4 (lower is better)
Translates to: LGTAILVLCNRHTPTSLLSDLCP*VVPSVI
Trigger: AATTACAGATGGGACCACTCAGGGGCAAAGGTCTGA...CAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTAGAAAAGAGGATGTCTaGGGCAGCATCAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLRKEDV*GSINVP
Trigger: AGGAACATTGATGCTGCCTCAGACATCCTCTTTTCT...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGCTTCCTCTGTCCACTaGAAACCAGGAGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLASSVH*KPGVQR
Trigger: CCTTTGCACTCCTGGTTTTCAGTGGACAGAGGAAGC...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp AGGTCACCTTGGGACTTGAGTAATGGATACTTCAGACTGGCTGTTTTCACTCTAAATGGCCTCAAGTCTTaGCTCTGCAGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RSPWDLSNGYFRLAVFTLNGLKS*LCRAGS
Trigger: AGACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATT...TAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCAAGGTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526962.1
CDS-3UTR TCA 90 bp GGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCACTCCAACTTCCCTCTTaGGTTGGCACTTTGTATACA +
Preference number: 4 (lower is better)
Translates to: GRSRIHNLEPSYRVAASSLQLPS*VGTLYT
Trigger: TGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAG...TGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCATTCACACATACCTCATaGTGTAATTCATGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: HRFSPLLLASWPSELLMAFTHTS*CNSWVL
Trigger: TAGCACCCATGAATTACATCATGAGGTATGTGTGAA...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR TCA 90 bp GCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTACCCTCCTCTGGGCCCATCAATTGACTGCTAAATaGATGAATGAGCTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: ARKRLQLRQQSLTLLWAHQLTAK*MNELEE
Trigger: CTCTTCTAGCTCATTCATTCATTTAGCAGTCAATTG...ATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGAGACCAGTTAAGGAGCTaGCCCAAGATTCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRDQLRS*PKIPQL
Trigger: TAGCTGTGGAATCTTGGGTCAGCTCCTTAACTGGTC...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp GCAGAGTCTTACCCTCCTCTGGGCCCATTAGCCCCACAAACAAAATGTTCTCTTCAAAAACCGGACCCATaGTTTTGTCATCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: AESYPPLGPLAPQTKCSLQKPDP*FCHPGL
Trigger: CAACCCAGGATGACAAAATCATGGGTCCGGTTTTTG...AAGAGAACATTTTGTTTGTGGGGCTAATGGGCCCAGAGGAGGGTAAGACTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTGAGAGCATTTCCTACCTaGACCATGGCCTATCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGTAILVLCNRHTPTSLLRAFPT*TMAYLL
Trigger: CAGGAGATAGGCCATGGTTCAGGTAGGAAATGCTCT...CAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp GGCTCATTCTCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCCTCAGGGTAGCTATCTaGACTGAATCCAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: GSFSDQWESSLLWRKEDVLRVAI*TESSIL
Trigger: GAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAG...GACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGGCTTCCTCAGCATGCTaGCTGTATATGCTTTATCGG +
Preference number: 4 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLASSAC*LYMLYR
Trigger: CCGATAAAGCATATACAGGCAGCATGCTGAGGAAGC...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp AAGCTGTCCTGTGTTCACACTAATGTCCGTGTTTTACAAGGTGACAGGTGTGTGGATTCTCTCCCCTATTaGTGGCTTCCTGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KLSCVHTNVRVLQGDRCVDSLPY*WLPGLL
Trigger: CAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC...CACACACCTGTCACCTTGTAAAACACGGACATTAGTGTGAACACAGGACAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTAAGACACACGTCAGATaGAGTAAGGAGAAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLKTHVR*SKEKRP
Trigger: AGGCCTTTTCTCCTTACTGCATCTGACGTGTGTCTT...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR GCA 90 bp ATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCATGTCTTTGGGAATGTaGCCTCTTCGAACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: MVSTPGHCYIGSLQQTYSMSLGM*PLRTLR
Trigger: CCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACAT...GGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR GCA 90 bp ATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGATGTCTTTGGGAATGTaGCCTCTTCGAACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: MEHMVSTPGHCYIGSLQQMSLGM*PLRTLR
Trigger: CCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACAT...CTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR GCA 90 bp GCAGAGTCTTACCCTCCTCTGGGCCCATTAGCCCCACAAACAAAATGTTCTCTTTCATGTTTCTCTGCCTaGAGGATTCACGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: AESYPPLGPLAPQTKCSLSCFSA*RIHDPE
Trigger: CTCAGGATCGTGAATCCTGCAGGCAGAGAAACATGA...AAGAGAACATTTTGTTTGTGGGGCTAATGGGCCCAGAGGAGGGTAAGACTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGATGGCTCATGTTTCTCTaGCTGCAGGATTCACGATCC +
Preference number: 4 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRWLMFL*LQDSRS
Trigger: GGATCGTGAATCCTGCAGGCAGAGAAACATGAGCCA...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCTGGCTCATGTTTCTCTaGCTGCAGGATTCACGATCC +
Preference number: 4 (lower is better)
Translates to: SQKDPNIRVWNTWSLPLGWLMFL*LQDSRS
Trigger: GGATCGTGAATCCTGCAGGCAGAGAAACATGAGCCA...GCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CGGGCAGCTGTGGCAGATTTGAAGGCAAAAGGAAGGGAGGCTACAGTTGTAGCTGTGTCCTCTCTTCTTTaGCTACCTGAAGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: RAAVADLKAKGREATVVAVSSLL*LPEEVL
Trigger: AAGAACTTCTTCAGGTAGGCAAAGAAGAGAGGACAC...AGCTACAACTGTAGCCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp GACTCAACTCAGACTGCCTGCAGAATTCCTGGGCGAGAAAGAACTCATCTTATTAGACTCAACTCAGACTaGCTGCAGAATTCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: DSTQTACRIPGRERTHLIRLNSD*LQNSWA
Trigger: CGCCCAGGAATTCTGCAGGCAGTCTGAGTTGAGTCT...AATAAGATGAGTTCTTTCTCGCCCAGGAATTCTGCAGGCAGTCTGAGTTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp TTATCGGTGCTGATGCCCAACCCTTCATCTTTAAAGTCTTGGGACCACTCTTCTCTCCACCTGATCCTTTaGCCTTTGCAAATGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LSVLMPNPSSLKSWDHSSLHLIL*PLQMPR
Trigger: CCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAG...AGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CCA 90 bp CTCTTGCTCAGGGTAGCTATCTGCACTGAATCCAGCATTCTCTGCCAAGACAGCCCCAAAACCGTAGATTaGAATAATCTGCCCCATCAG +
Preference number: 4 (lower is better)
Translates to: LLLRVAICTESSILCQDSPKTVD*NNLPHQ
Trigger: CTGATGGGGCAGATTATTCCAATCTACGGTTTTGGG...GCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CCA 90 bp CATGATATCCATGATAGTGGCCTGATAGCTATGACACTTGAACACAGTGAAGAAGGGCTCTGGGGTCAGTaGGCAGACTTTCCCAACCCA +
Preference number: 4 (lower is better)
Translates to: HDIHDSGLIAMTLEHSEEGLWGQ*ADFPNP
Trigger: TGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCCC...TTCTTCACTGTGTTCAAGTGTCATAGCTATCAGGCCACTATCATGGATATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGATTTCACTCTAAACCCTaGGGGTTACGCTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRFHSKP*GLRFLS
Trigger: GCTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAA...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTTTTCACTCTAAACCCTaGGGGTTACGCTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSFHSKP*GLRFLS
Trigger: GCTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAA...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GCAGTTCTGTTAAGCAGAACAGGGGTAAAGGAAGCTAGATATCCAGGTAGTATCTCTCTCCCCTATTGCTaGCTTCCTGGCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: AVLLSRTGVKEARYPGSISLPYC*LPGLLS
Trigger: GCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGA...GATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTGCTTAACAGAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CAGGGTAACCTTCCCAGTCCTCCATGTAAGGGGCCTCCTCAGCTTCTTTCTCTGACTTCCCTCTTGAGTTaGCACTTTGTATACAAGATC +
Preference number: 4 (lower is better)
Translates to: QGNLPSPPCKGPPQLLSLTSLLS*HFVYKI
Trigger: GATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGT...CAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526962.1
CDS-3UTR CCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCATGGTCTCTACCCCTaGGCACTGCTATATTGGTTC +
Preference number: 4 (lower is better)
Translates to: KKTQISEYGTHGLYPWALHGLYP*ALLYWF
Trigger: GAACCAATATAGCAGTGCCCAGGGGTAGAGACCATG...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp GCAGAGTCTTACCCTCCTCTGGGCCCATTAGCCCCACAAACAAAATGTTCTCTTGACTGGGAATGTCTTTaGGAATGTGCCCTCTTCGAA +
Preference number: 4 (lower is better)
Translates to: AESYPPLGPLAPQTKCSLDWECL*ECALFE
Trigger: TTCGAAGAGGGCACATTCCCAAAGACATTCCCAGTC...AAGAGAACATTTTGTTTGTGGGGCTAATGGGCCCAGAGGAGGGTAAGACTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CCA 90 bp ACTGGGAATGTCTTTGGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTAAAGAGACAGCAGCCCTaGCAACAAAAACCGGACCCA +
Preference number: 4 (lower is better)
Translates to: TGNVFGNVPSSNSQVLHVKRQQP*QQKPDP
Trigger: TGGGTCCGGTTTTTGTTGCCAGGGCTGCTGTCTCTT...TACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAATAAGGTGCATTGTATaGTTCTCAAAGGCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: HRFSPLLLASWPSELLMAIRCIV*FSKAVD
Trigger: ATCAACGGCCTTTGAGAACCATACAATGCACCTTAT...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR CAA 72 bp CCACTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTaGGCAGTTCTGTTAAGCAGAACAGGGGTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: PLKTRSAKVLLG*AVLLSRTGVKE
Trigger: TTCCTTTACCCCTGTTCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CAA 72 bp ATCGGTGCTGATGCCCAACCCTTCATCTTTAAAGTCTaGGGACCACTCTTCTTTGGTGGTTTCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: IGADAQPFIFKV*GPLFFGGFLLL
Trigger: GAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR TCA 90 bp TGGCCTTACAATGGCTATTTGGAAATCACTGTGCCAATCCCAATAATAAAAGCTCTGTGGAGTACGCCATaGCTGCTCACGGTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: WPYNGYLEITVPIPIIKALWSTP*LLTVVA
Trigger: TGCGACCACCGTGAGCAGTCATGGCGTACTCCACAG...AGCTTTTATTATTGGGATTGGCACAGTGATTTCCAAATAGCCATTGTAAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR TCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCAGTGATTTCTCGGAGCTaGTGTAGCAACCGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LKKTQISEYGTHGLYPWAVISRS*CSNRFS
Trigger: AGAGAAACGGTTGCTACATCAGCTCCGAGAAATCAC...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTGGTGATTTCTCGGAGCTaGTGTAGCAACCGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LGTAILVLCNRHTPTSLLVISRS*CSNRFS
Trigger: AGAGAAACGGTTGCTACATCAGCTCCGAGAAATCAC...CAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATTTCTTGCCTACGCTTaGTACAGTCTGAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GRSRIHNLEPSYRVAASSFLAYA*YSLKGH
Trigger: ATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAA...TGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CTCTTGCTCAGGGTAGCTATCTGCACTGAATCCAGCATTCTCTGCCAAGACAGCTTTCTTGCCTACGCTTaGTACAGTCTGAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LLLRVAICTESSILCQDSFLAYA*YSLKGH
Trigger: ATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAA...GCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR TCA 90 bp ATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCGGATCCTCGTCTTCATaGAAACAGCAGGAACATGTT +
Preference number: 4 (lower is better)
Translates to: MVSTPGHCYIGSLQQTYSGSSSS*KQQEHV
Trigger: AACATGTTCCTGCTGTTTTCATGAAGACGAGGATCC...GGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GGCTCATTCTCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCGGATCCTCGTCTTCATaGAAACAGCAGGAACATGTT +
Preference number: 4 (lower is better)
Translates to: GSFSDQWESSLLWRKEDVGSSSS*KQQEHV
Trigger: AACATGTTCCTGCTGTTTTCATGAAGACGAGGATCC...GACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCAATGCTTTATCGGTGCTaGTGCCCAACCCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LKKTQISEYGTHGLYPWAMLYRC*CPTLHL
Trigger: AAGATGAAGGGTTGGGCATCAGCACCGATAAAGCAT...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTATGCTTTATCGGTGCTaGTGCCCAACCCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSMLYRC*CPTLHL
Trigger: AAGATGAAGGGTTGGGCATCAGCACCGATAAAGCAT...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGGGTCACCTTGGGACTTaGGTAATGGATACTTCAGAC +
Preference number: 4 (lower is better)
Translates to: KKTQISEYGTHGLYPWALGHLGT*VMDTSD
Trigger: GTCTGAAGTATCCATTACTCAAGTCCCAAGGTGACC...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp ACTGGGAATGTCTTTGGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTAGCCAAGAAGGAAATCTaGGGAGAGAGAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: TGNVFGNVPSSNSQVLHVAKKEI*GERGHL
Trigger: AAGGTGACCTCTCTCTCCTCAGATTTCCTTCTTGGC...TACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR TCA 90 bp CGGGCAGCTGTGGCAGATTTGAAGGCAAAAGGAAGGGAGGCTACAGTTGTAGCTTTCACACATACCTCATaGTGTAATTCATGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: RAAVADLKAKGREATVVAFTHTS*CNSWVL
Trigger: TAGCACCCATGAATTACATCATGAGGTATGTGTGAA...AGCTACAACTGTAGCCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CCTAGGAAGACCCTCGCTGCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTGCATTCTTCACAATGTaGATCAAATGTTCTACACAG +
Preference number: 4 (lower is better)
Translates to: PRKTLAARKRLQLRQQSLAFFTM*IKCSTQ
Trigger: CTGTGTAGAACATTTGATTCACATTGTGAAGAATGC...AAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGCAGCGAGGGTCTTCCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR TCA 90 bp GGCTCATTCTCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCATCAACCCCTCACAGTaGACGAAGGGAAATAACACA +
Preference number: 4 (lower is better)
Translates to: GSFSDQWESSLLWRKEDVINPSQ*TKGNNT
Trigger: TGTGTTATTTCCCTTCGTTCACTGTGAGGGGTTGAT...GACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCAAAAACCGGACCCATaGTTTTGTCATCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSQKPDP*FCHPGL
Trigger: CAACCCAGGATGACAAAATCATGGGTCCGGTTTTTG...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCACCCTCGTGAGAAATaGAGACCGCAAGAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSHPREK*RPQEKR
Trigger: TCTCTTTTCTTGCGGTCTTCATTTCTCACGAGGGTG...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCTGTCCATAAAGGTATaGCTTGTGTACTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLLSIKV*LVYSAT
Trigger: TGTGGCAGAGTACACAAGTCATACCTTTATGGACAG...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp GTTCATTTTATCTGTCAGGCTCTCTCTCGTCACACTGAGTTTTCTGAGGGTAGACAGCAACACTGGACTTaGCAGAGTGGTGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: VHFICQALSRHTEFSEGRQQHWT*QSGDRD
Trigger: ATCCCTGTCACCACTCTGTCAAGTCCAGTGTTGCTG...TCTACCCTCAGAAAACTCAGTGTGACGAGAGAGAGCCTGACAGATAAAATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp AATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTGAATCCAGCATTCTCTaGCAAGACAGCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: NIRVWNTWSLPLGTAILVESSIL*QDSRIL
Trigger: GAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTC...AACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTCAGGGTAGCTATCTaGACTGAATCCAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSLRVAI*TESSIL
Trigger: GAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAG...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGTCTACCCCTGGGCACTaGTATATTGGTTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: KKTQISEYGTHGLYPWALSTPGH*YIGSLQ
Trigger: TTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGA...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCATGTCTTTGGGAATGTaGCCTCTTCGAACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SQKDPNIRVWNTWSLPLGMSLGM*PLRTLR
Trigger: CCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACAT...GCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR GCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCATCATGTTTCTCTGCCTaGAGGATTCACGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: LKKTQISEYGTHGLYPWASCFSA*RIHDPE
Trigger: CTCAGGATCGTGAATCCTGCAGGCAGAGAAACATGA...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp AAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATCCACAGCTAGAAAATaGAGGGACAGATTATGGCTC +
Preference number: 4 (lower is better)
Translates to: KTQISEYGTHGLYPWALLSTARK*RDRLWL
Trigger: GAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGA...TAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp AAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGAACAAAGAAGTTCTTTGCATaGCTCAAGGCCCACCTCCCA +
Preference number: 4 (lower is better)
Translates to: KTRSAKVLLGLAVLLSRTKKFFA*LKAHLP
Trigger: TGGGAGGTGGGCCTTGAGGCATGCAAAGAACTTCTT...TGTTCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp GGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCAGTGTCCTCTCTTCTTTaGCTACCTGAAGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: GRSRIHNLEPSYRVAASSVSSLL*LPEEVL
Trigger: AAGAACTTCTTCAGGTAGGCAAAGAAGAGAGGACAC...TGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp GGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCATGATGCATCATAGGTaGAAATCGGCCCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: GAEFTILSPLIGLQPPHGMMHHR*KSAQFS
Trigger: GGAAAATTGGGCCGATTTCCACCTATGATGCATCAT...GCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CCA 90 bp ATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGCCCAAAACCGTAGATTaGAATAATCTGCCCCATCAG +
Preference number: 4 (lower is better)
Translates to: MEHMVSTPGHCYIGSLQQPKTVD*NNLPHQ
Trigger: CTGATGGGGCAGATTATTCCAATCTACGGTTTTGGG...CTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CCA 90 bp AAGGAGCTGACCCAAGATTCCACAGCTAGAAAATGCAGGGACAGATTATGGCTCGCAGGAACATGTTTCTaGCTTTGGATCACACGAGGT +
Preference number: 4 (lower is better)
Translates to: KELTQDSTARKCRDRLWLAGTCF*LWITRG
Trigger: ACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGC...GAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGAATCTTGGGTCAGCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCGCAGGAACATGTTTCTaGCTTTGGATCACACGAGGT +
Preference number: 4 (lower is better)
Translates to: SQKDPNIRVWNTWSLPLGAGTCF*LWITRG
Trigger: ACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGC...GCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACCACTCTTCTTTGGTaGTTTCCTCTTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SQKDPNIRVWNTWSLPLGTTLLW*FPLAQG
Trigger: ACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGT...GCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CTATCTGCACTGAATCCAGCATTCTCTGCCAAGACAGCAGGATCCTCGTCTTCAAGAGAGAGGTCACCTTaGGACTTGAGTAATGGATAC +
Preference number: 4 (lower is better)
Translates to: LSALNPAFSAKTAGSSSSRERSP*DLSNGY
Trigger: GTATCCATTACTCAAGTCCCAAGGTGACCTCTCTCT...TGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526962.1
CDS-3UTR CCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTTCATTCTCAGATCAGTaGGAGTCTTCCCTACTCTGG +
Preference number: 4 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSSFSDQ*ESSLLW
Trigger: CCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGA...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCATTCCTGCAGCTTCAATaGCCTCAAGTCTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: LKKTQISEYGTHGLYPWAFLQLQ*PQVLTL
Trigger: CAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAA...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp TATTTCTTCAGCAGAAAGTTCTTTTGGGTCAGGGTAATCCACCAAGATTGTTTCGTTGCAGCCTCCTCATaGCAGGACCATCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: YFFSRKFFWVRVIHQDCFVAASS*QDHPWA
Trigger: TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAAC...GAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526962.1
CDS-3UTR CCA 90 bp GGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCTGGGCACTGCTATATTaGTTCTCTGCAACAGACATA +
Preference number: 4 (lower is better)
Translates to: GAEFTILSPLIGLQPPHGWALLY*FSATDI
Trigger: TATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCA...GCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCATCTACATTTCATGACTaGGAATGTCTTTGGGAATGT +
Preference number: 4 (lower is better)
Translates to: HRFSPLLLASWPSELLMASTFHD*ECLWEC
Trigger: ACATTCCCAAAGACATTCCCAGTCATGAAATGTAGA...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CCA 90 bp GTTCATTTTATCTGTCAGGCTCTCTCTCGTCACACTGAGTTTTCTGAGGGTAGATGTGGCCTCTGCCTCTaGTGGGAAATAGCGCATACA +
Preference number: 4 (lower is better)
Translates to: VHFICQALSRHTEFSEGRCGLCL*WEIAHT
Trigger: TGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACA...TCTACCCTCAGAAAACTCAGTGTGACGAGAGAGAGCCTGACAGATAAAATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGGTCTCAGGGCTTGCTTaGACCCTAACCCATTTAAAC +
Preference number: 4 (lower is better)
Translates to: KKTQISEYGTHGLYPWALVSGLA*TLTHLN
Trigger: GTTTAAATGGGTTAGGGTCCAAGCAAGCCCTGAGAC...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGAACCACACCCAGAGGCTaGAAAAATGGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRTTPRG*KNGEVR
Trigger: TCTGACTTCACCATTTTTCCAGCCTCTGGGTGTGGT...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp TGGGGGTCTGCTTTAAAGAACCTACACCCATGTCTCCCCAGAGCTAGGAAATATTGCCTGCAGAATTCCTaGGCGAGAAAGAACTCATCT +
Preference number: 4 (lower is better)
Translates to: WGSALKNLHPCLPRARKYCLQNS*ARKNSS
Trigger: AGATGAGTTCTTTCTCGCCCAGGAATTCTGCAGGCA...ATATTTCCTAGCTCTGGGGAGACATGGGTGTAGGTTCTTTAAAGCAGACCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp TCTAGACAGGAGGGCAAAGTGAGTCTTCTGCCTCTAATTCACAGTACAGGGGCCAGTGCTGCTTCTTTATaGCACCAGAGAACAAGCATT +
Preference number: 4 (lower is better)
Translates to: SRQEGKVSLLPLIHSTGASAASL*HQRTSI
Trigger: AATGCTTGTTCTCTGGTGCCATAAAGAAGCAGCACT...GGCCCCTGTACTGTGAATTAGAGGCAGAAGACTCACTTTGCCCTCCTGTCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR TCA 90 bp CTCTTGCTCAGGGTAGCTATCTGCACTGAATCCAGCATTCTCTGCCAAGACAGCACGCTTGATACAGTCTaGAAGGTCATAAATTGGGTA +
Preference number: 4 (lower is better)
Translates to: LLLRVAICTESSILCQDSTLDTV*KVINWV
Trigger: TACCCAATTTATGACCTTTCAGACTGTATCAAGCGT...GCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR TCA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTTTTCTTGCCTACGCTTaGTACAGTCTGAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPFLAYA*YSLKGH
Trigger: ATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAA...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp ATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGTTTCTTGCCTACGCTTaGTACAGTCTGAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: MEHMVSTPGHCYIGSLQQFLAYA*YSLKGH
Trigger: ATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAA...CTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCTTTCCCAACCCAAATaGTCTGATTCTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLLSQPK*SDSSSS
Trigger: AGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAG...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp AGGTCACCTTGGGACTTGAGTAATGGATACTTCAGACTGGCTGTTTTCACTCTAGCCAAGAAGGAAATCTaGGGAGAGAGAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: RSPWDLSNGYFRLAVFTLAKKEI*GERGHL
Trigger: AAGGTGACCTCTCTCTCCTCAGATTTCCTTCTTGGC...TAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCAAGGTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526962.1
CDS-3UTR TCA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGATGTTCGTTCACAGGTaGACTATCTGTTACACCTAC +
Preference number: 4 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLMFVHR*TICYTY
Trigger: GTAGGTGTAACAGATAGTTCACCTGTGAACGAACAT...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp ATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGAGGGATCTTGGAGTCTaGAATCTTCATTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: MEHMVSTPGHCYIGSLQQRDLGV*NLHSCN
Trigger: GTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCT...CTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp AAGGAGCTGACCCAAGATTCCACAGCTAGAAAATGCAGGGACAGATTATGGCTCCTCCAACTTCCCTCTTaGGTTGGCACTTTGTATACA +
Preference number: 4 (lower is better)
Translates to: KELTQDSTARKCRDRLWLLQLPS*VGTLYT
Trigger: TGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAG...GAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGAATCTTGGGTCAGCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CACATACCTCATGATGTAATTCATGGGTGCTATCTTGTCTCAAGAAGACACACGCTCCCTTTACTACCCTaGAGCCAAAGCTCAGACCAG +
Preference number: 4 (lower is better)
Translates to: HIPHDVIHGCYLVSRRHTLPLLP*SQSSDQ
Trigger: CTGGTCTGAGCTTTGGCTTCAGGGTAGTAAAGGGAG...CGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACATCATGAGGTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp TCCAACTTCCCTCTTGAGTTGGCACTTTGTATACAAGATCAGTCCTCATTTGTTAAAAGGCCAGGGGACTaGTCAAGTTCCCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: SNFPLELALCIQDQSSFVKRPGD*SSSQHP
Trigger: AGGGTGCTGGGAACTTGATCAGTCCCCTGGCCTTTT...AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGACTGTCCATAAAGGTATaGCTTGTGTACTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRLSIKV*LVYSAT
Trigger: TGTGGCAGAGTACACAAGTCATACCTTTATGGACAG...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CACATACCTCATGATGTAATTCATGGGTGCTATCTTGTCTCAAGAAGACACACGCAGCTGTGGCAGATTTaGAGGCAAAAGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HIPHDVIHGCYLVSRRHTQLWQI*RQKEGR
Trigger: CCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTG...CGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACATCATGAGGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGAGGCTGGAAAAATGGTaGAGTCAGAAGGTACTTAAG +
Preference number: 4 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLRLEKW*SQKVLK
Trigger: CTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCT...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp AGCAGGATCCTCGTCTTCATGAAAACAGCAGGAACATGTTTCTGGCTTTGGATCCTCAGGGTAGCTATCTaGACTGAATCCAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: SRILVFMKTAGTCFWLWILRVAI*TESSIL
Trigger: GAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAG...GATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR GCA 90 bp ACTGGGAATGTCTTTGGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTACATGCTGCCTGTATATaGTTTATCGGTGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: TGNVFGNVPSSNSQVLHVHAACI*FIGADA
Trigger: GGCATCAGCACCGATAAAGCATATACAGGCAGCATG...TACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR GCA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGTACGCTTCCTCAGCATaGTGCCTGTATATGCTTTAT +
Preference number: 4 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLYASSA*CLYMLY
Trigger: ATAAAGCATATACAGGCAGCATGCTGAGGAAGCGTA...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp GGGTGCCTGGTGATGATGCATCATAGGTGGAAATCGGCCCAATTTTCCTTAACCTACGCTTCCTCAGCATaGTGCCTGTATATGCTTTAT +
Preference number: 4 (lower is better)
Translates to: GCLVMMHHRWKSAQFSLTYASSA*CLYMLY
Trigger: ATAAAGCATATACAGGCAGCATGCTGAGGAAGCGTA...GGTTAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR GCA 90 bp GGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCAGCTATATTGGTTCTCTaGAACAGACATACTCCAACT +
Preference number: 4 (lower is better)
Translates to: GRSRIHNLEPSYRVAASSAILVL*NRHTPT
Trigger: AGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGC...TGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp CATGATATCCATGATAGTGGCCTGATAGCTATGACACTTGAACACAGTGAAGAATGTACTCTGCCACAGTaGCAAAAGGCCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: HDIHDSGLIAMTLEHSEECTLPQ*QKARGL
Trigger: CAGTCCCCTGGCCTTTTGGCACTGTGGCAGAGTACA...TTCTTCACTGTGTTCAAGTGTCATAGCTATCAGGCCACTATCATGGATATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp TCCAACTTCCCTCTTGAGTTGGCACTTTGTATACAAGATCAGTCCTCATTTGTTTGTACTCTGCCACAGTaGCAAAAGGCCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: SNFPLELALCIQDQSSFVCTLPQ*QKARGL
Trigger: CAGTCCCCTGGCCTTTTGGCACTGTGGCAGAGTACA...AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp ACTGGGAATGTCTTTGGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTAATGACTTGTGTACTCTaGCACAGTGCCAAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TGNVFGNVPSSNSQVLHVMTCVL*HSAKRP
Trigger: TGGCCTTTTGGCACTGTGGCAGAGTACACAAGTCAT...TACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp GGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCACCAAGCCATATAAGGTaGATTGTATGGTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GRSRIHNLEPSYRVAASSPSHIR*IVWFSK
Trigger: CTTTGAGAACCATACAATGCACCTTATATGGCTTGG...TGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGCCTTCCTCTGGCCTGTaGCTTTCAAGTTTAAGGTTC +
Preference number: 4 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLPSSGL*LSSLRF
Trigger: GAACCTTAAACTTGAAAGGCACAGGCCAGAGGAAGG...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp TTGAATTGTATCACTCACTGGATTAAGAACCAAAAGATCCATGTTCAAGTCCTAGGGACAGGAAGGCCTTaGGCAGCAGCAGCGACAGAG +
Preference number: 4 (lower is better)
Translates to: LNCITHWIKNQKIHVQVLGTGRP*AAAATE
Trigger: CTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCC...TAGGACTTGAACATGGATCTTTTGGTTCTTAATCCAGTGAGTGATACAATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp ACTGGTAATTTTCCTGTGGGTGTTTCCAGGCATGGCAGTATAGCATTTCCCATCGCAGGAACATGTTTCTaGCTTTGGATCACACGAGGT +
Preference number: 4 (lower is better)
Translates to: TGNFPVGVSRHGSIAFPIAGTCF*LWITRG
Trigger: ACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGC...GATGGGAAATGCTATACTGCCATGCCTGGAAACACCCACAGGAAAATTACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CCA 90 bp CCTAGGAAGACCCTCGCTGCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTAAGAATAAGGGATCTTaGAGTCTGAAATCTTCATTC +
Preference number: 4 (lower is better)
Translates to: PRKTLAARKRLQLRQQSLKNKGS*SLKSSF
Trigger: GAATGAAGATTTCAGACTCCAAGATCCCTTATTCTT...AAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGCAGCGAGGGTCTTCCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp AATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTTTCCTGCAGCTTCAATaGCCTCAAGTCTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: NIRVWNTWSLPLGTAILVFLQLQ*PQVLTL
Trigger: CAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAA...AACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCATGGCAGGACCATCCCTaGGCAGGGCTTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSWQDHP*AGLPAA
Trigger: AGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCCA...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CCA 90 bp TCCAACTTCCCTCTTGAGTTGGCACTTTGTATACAAGATCAGTCCTCATTTGTTTCTCTCCCCTATTGCTaGCTTCCTGGCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SNFPLELALCIQDQSSFVSLPYC*LPGLLS
Trigger: GCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGA...AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp AAGGAGCTGACCCAAGATTCCACAGCTAGAAAATGCAGGGACAGATTATGGCTCCCAAATATCCGAGTATaGAACACATGGTCTCTACCC +
Preference number: 4 (lower is better)
Translates to: KELTQDSTARKCRDRLWLPNIRV*NTWSLP
Trigger: GGGTAGAGACCATGTGTTCCATACTCGGATATTTGG...GAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGAATCTTGGGTCAGCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp GGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAAAAGGCCTTTAGTTTaGTCAAAATCCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GAEFTILSPLIGLQPPHGKRPLV*SKSSQS
Trigger: AGACTGGGAGGATTTTGACCAAACTAAAGGCCTTTT...GCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTAAAAGGCCTTTAGTTTaGTCAAAATCCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLKRPLV*SKSSQS
Trigger: AGACTGGGAGGATTTTGACCAAACTAAAGGCCTTTT...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp ATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGAATTCATGGGGAAACTaGTTCTCTGAGAGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: MEHMVSTPGHCYIGSLQQNSWGN*FSERLR
Trigger: CCTTAACCTCTCAGAGAACCAGTTTCCCCATGAATT...CTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp TCCCCAGAGCTAGGAAATATCAGGCTTAATTTCAGGAGGGACAGTTCTGTCTCAGAGGTGGAACTCAACTaGGGGTCTGCTTTAAAGAAC +
Preference number: 4 (lower is better)
Translates to: SPELGNIRLNFRRDSSVSEVELN*GSALKN
Trigger: GTTCTTTAAAGCAGACCCCCAGTTGAGTTCCACCTC...TGAGACAGAACTGTCCCTCCTGAAATTAAGCCTGATATTTCCTAGCTCTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR CAA 72 bp AGGGATCATGCTGTCACCAAGCACCTACCACATGCTTaGCCCTGGCACAGACACTTTATAAACAGCATCTTA +
Preference number: 4 (lower is better)
Translates to: RDHAVTKHLPHA*PWHRHFINSIL
Trigger: TAAGATGCTGTTTATAAAGTGTCTGTGCCAGGGCAAAGCATGTGGTAGGTGCTTGGTGACAGCATGATCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR CAA 72 bp AAAGTCTTGGGACCACTCTTCTTTGGTGGTTTCCTCTaGCTCAGGGTAGCTATCTGCACTGAATCCAGCATT +
Preference number: 4 (lower is better)
Translates to: KVLGPLFFGGFL*LRVAICTESSI
Trigger: AATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCAAGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR TCA 90 bp ATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAGTTTTTCTTGCAGTTaGGCAAGCTCAAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: MVSTPGHCYIGSLQQTYSSFSCS*ASSKLV
Trigger: TACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACT...GGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR TCA 90 bp AAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTAACGCTTGATACAGTCTaGAAGGTCATAAATTGGGTA +
Preference number: 4 (lower is better)
Translates to: KTQISEYGTHGLYPWALLTLDTV*KVINWV
Trigger: TACCCAATTTATGACCTTTCAGACTGTATCAAGCGT...TAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp ATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCACGCTTGATACAGTCTaGAAGGTCATAAATTGGGTA +
Preference number: 4 (lower is better)
Translates to: MVSTPGHCYIGSLQQTYSTLDTV*KVINWV
Trigger: TACCCAATTTATGACCTTTCAGACTGTATCAAGCGT...GGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp AAGCTGTCCTGTGTTCACACTAATGTCCGTGTTTTACAAGGTGACAGGTGTGTGGGATCCTCGTCTTCATaGAAACAGCAGGAACATGTT +
Preference number: 4 (lower is better)
Translates to: KLSCVHTNVRVLQGDRCVGSSSS*KQQEHV
Trigger: AACATGTTCCTGCTGTTTTCATGAAGACGAGGATCC...CACACACCTGTCACCTTGTAAAACACGGACATTAGTGTGAACACAGGACAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp AGCAGGATCCTCGTCTTCATGAAAACAGCAGGAACATGTTTCTGGCTTTGGATCGGATCCTCGTCTTCATaGAAACAGCAGGAACATGTT +
Preference number: 4 (lower is better)
Translates to: SRILVFMKTAGTCFWLWIGSSSS*KQQEHV
Trigger: AACATGTTCCTGCTGTTTTCATGAAGACGAGGATCC...GATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR TCA 90 bp GGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCAGCATTCTTCACAATGTaGATCAAATGTTCTACACAG +
Preference number: 4 (lower is better)
Translates to: GRSRIHNLEPSYRVAASSAFFTM*IKCSTQ
Trigger: CTGTGTAGAACATTTGATTCACATTGTGAAGAATGC...TGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR TCA 90 bp AATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTATCAACCCCTCACAGTaGACGAAGGGAAATAACACA +
Preference number: 4 (lower is better)
Translates to: NIRVWNTWSLPLGTAILVINPSQ*TKGNNT
Trigger: TGTGTTATTTCCCTTCGTTCACTGTGAGGGGTTGAT...AACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp AAGCTGTCCTGTGTTCACACTAATGTCCGTGTTTTACAAGGTGACAGGTGTGTGGTTCTCAAAGGCCGTTaGTTCTACAGGCCAAATACA +
Preference number: 4 (lower is better)
Translates to: KLSCVHTNVRVLQGDRCVVLKGR*FYRPNT
Trigger: TGTATTTGGCCTGTAGAATCAACGGCCTTTGAGAAC...CACACACCTGTCACCTTGTAAAACACGGACATTAGTGTGAACACAGGACAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGTTCTCAAAGGCCGTTaGTTCTACAGGCCAAATACA +
Preference number: 4 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLVLKGR*FYRPNT
Trigger: TGTATTTGGCCTGTAGAATCAACGGCCTTTGAGAAC...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp GCAGAGTCTTACCCTCCTCTGGGCCCATTAGCCCCACAAACAAAATGTTCTCTTACCAAGATTGTTTCTTaGCTACGCTTGATACAGTCT +
Preference number: 4 (lower is better)
Translates to: AESYPPLGPLAPQTKCSLTKIVS*LRLIQS
Trigger: AGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGT...AAGAGAACATTTTGTTTGTGGGGCTAATGGGCCCAGAGGAGGGTAAGACTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp TCCAACTTCCCTCTTGAGTTGGCACTTTGTATACAAGATCAGTCCTCATTTGTTGATTCTCTCCCCTATTaGTGGCTTCCTGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SNFPLELALCIQDQSSFVDSLPY*WLPGLL
Trigger: CAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC...AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCATTCAACAACTCTTTCTaGCAAGAGTGTCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LKKTQISEYGTHGLYPWAFNNSF*QECPLF
Trigger: GAAGAGAGGACACTCTTGGCAGAAAGAGTTGTTGAA...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp GCAGTTCTGTTAAGCAGAACAGGGGTAAAGGAAGCTAGATATCCAGGTAGTATCCCTTCCTCTGGCCTGTaGCTTTCAAGTTTAAGGTTC +
Preference number: 4 (lower is better)
Translates to: AVLLSRTGVKEARYPGSIPSSGL*LSSLRF
Trigger: GAACCTTAAACTTGAAAGGCACAGGCCAGAGGAAGG...GATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTGCTTAACAGAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp AATATCAGGCTTAATTTCAGGAGGGACAGTTCTGTCTCAGGAGAATTATTGGAGCTCCACCTGATCCTTTaGCCTTTGCAAATGCCTCGG +
Preference number: 4 (lower is better)
Translates to: NIRLNFRRDSSVSGELLELHLIL*PLQMPR
Trigger: CCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAG...CTCCAATAATTCTCCTGAGACAGAACTGTCCCTCCTGAAATTAAGCCTGATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp GCAGTTCTGTTAAGCAGAACAGGGGTAAAGGAAGCTAGATATCCAGGTAGTATCGGGTGTTTCCAGGCATaGCAGTATAGCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: AVLLSRTGVKEARYPGSIGCFQA*QYSISH
Trigger: ATGGGAAATGCTATACTGCCATGCCTGGAAACACCC...GATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTGCTTAACAGAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CCA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGAAGCAGAAAGTTCTTTTaGGTCAGGGTAATCCACCAA +
Preference number: 4 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRSRKFF*VRVIHQ
Trigger: TTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCT...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CTGCCAAGACAGCAGGATCCTCGTCTTCATGAAAACAGCAGGAACATGTTTCTGAGCAGAAAGTTCTTTTaGGTCAGGGTAATCCACCAA +
Preference number: 4 (lower is better)
Translates to: LPRQQDPRLHENSRNMFLSRKFF*VRVIHQ
Trigger: TTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCT...CAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR CCA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGACTTCCCTCTTGAGTTaGCACTTTGTATACAAGATC +
Preference number: 4 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLTSLLS*HFVYKI
Trigger: GATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGT...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp AAGCTGTCCTGTGTTCACACTAATGTCCGTGTTTTACAAGGTGACAGGTGTGTGCCAAATATCCGAGTATaGAACACATGGTCTCTACCC +
Preference number: 4 (lower is better)
Translates to: KLSCVHTNVRVLQGDRCVPNIRV*NTWSLP
Trigger: GGGTAGAGACCATGTGTTCCATACTCGGATATTTGG...CACACACCTGTCACCTTGTAAAACACGGACATTAGTGTGAACACAGGACAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTTTTAAACTGTTTTCCTaGCACCTTATTCATGCCAAG +
Preference number: 4 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLFKLFS*HLIHAK
Trigger: CTTGGCATGAATAAGGTGCCAGGAAAACAGTTTAAA...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR TCA 90 bp AATGGCTATTTGGAAATCACTGTGCCAATCCCAATAATAAAAGCTCTTCTTAGAAATGCCTCGGCAAGGTaGGACCTCTGGAAACGAGCC +
Preference number: 4 (lower is better)
Translates to: NGYLEITVPIPIIKALLRNASAR*DLWKRA
Trigger: GGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATT...TCTAAGAAGAGCTTTTATTATTGGGATTGGCACAGTGATTTCCAAATAGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR TCA 90 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACGCTTGATACAGTCTaGAAGGTCATAAATTGGGTA +
Preference number: 4 (lower is better)
Translates to: SQKDPNIRVWNTWSLPLGTLDTV*KVINWV
Trigger: TACCCAATTTATGACCTTTCAGACTGTATCAAGCGT...GCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GTCATAAATTGGGTAAGTCTCTTCAGGGTAACCTTCCCAGTCCTCCATGTAAGGCTTTCCCAACCCAAATaGTCTGATTCTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VINWVSLFRVTFPVLHVRLSQPK*SDSSSS
Trigger: AGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAG...CCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR TCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGATGTTCGTTCACAGGTaGACTATCTGTTACACCTAC +
Preference number: 4 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLMFVHR*TICYTY
Trigger: GTAGGTGTAACAGATAGTTCACCTGTGAACGAACAT...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGAGGGATCTTGGAGTCTaGAATCTTCATTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLRDLGV*NLHSCN
Trigger: GTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCT...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GGCTCATTCTCAGATCAGTGGGAGTCTTCCCTACTCTGGAGAAAAGAGGATGTCGTCTTACATGTAAACTaGATTCACACATACCTCATG +
Preference number: 4 (lower is better)
Translates to: GSFSDQWESSLLWRKEDVVLHVN*IHTYLM
Trigger: CATGAGGTATGTGTGAATTCAGTTTACATGTAAGAC...GACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR TCA 90 bp ATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGGTCTTACATGTAAACTaGATTCACACATACCTCATG +
Preference number: 4 (lower is better)
Translates to: MEHMVSTPGHCYIGSLQQVLHVN*IHTYLM
Trigger: CATGAGGTATGTGTGAATTCAGTTTACATGTAAGAC...CTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR TCA 90 bp AAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGAACACTGATTTACCAAGAGTaGTCCCAGATTATGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KTRSAKVLLGLAVLLSRTLIYQE*SQIMQL
Trigger: CAACTGCATAATCTGGGATCACTCTTGGTAAATCAG...TGTTCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGACCAAGATTGTTTCTTaGCTACGCTTGATACAGTCT +
Preference number: 4 (lower is better)
Translates to: KKTQISEYGTHGLYPWALTKIVS*LRLIQS
Trigger: AGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGT...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp CTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTGACCAAGATTGTTTCTTaGCTACGCTTGATACAGTCT +
Preference number: 4 (lower is better)
Translates to: LGTAILVLCNRHTPTSLLTKIVS*LRLIQS
Trigger: AGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGT...CAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp AGCAGGATCCTCGTCTTCATGAAAACAGCAGGAACATGTTTCTGGCTTTGGATCTACGCTTCCTCAGCATaGTGCCTGTATATGCTTTAT +
Preference number: 4 (lower is better)
Translates to: SRILVFMKTAGTCFWLWIYASSA*CLYMLY
Trigger: ATAAAGCATATACAGGCAGCATGCTGAGGAAGCGTA...GATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR GCA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGAGCTATATTGGTTCTCTaGAACAGACATACTCCAACT +
Preference number: 4 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRAILVL*NRHTPT
Trigger: AGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGC...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR GCA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTGATGTAATTCATGGGTaGTATCTTGTCTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPDVIHG*YLVSRR
Trigger: TCTTCTTGAGACAAGATAGCACCCATGAATTACATC...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR GCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGATAATGGTTTCTTTGTaGTCCTGTTGTGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: KKTQISEYGTHGLYPWALIMVSL*SCCDQE
Trigger: TTCCTGGTCACAACAGGAGCACAAAGAAACCATTAT...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp AAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTAGACAGTCTTAGTTTATaGCTATCACCTTGGCATAAT +
Preference number: 4 (lower is better)
Translates to: KTQISEYGTHGLYPWALLDSLSL*LSPWHN
Trigger: ATTATGCCAAGGTGATAGGCATAAACTAAGACTGTC...TAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CATCTCAAATTCCTGTGGAGAAACAAGCAGGATAAAGTGGTGTCATTATTTGGCTCAACTCAGACTGCCTaGAGAATTCCTGGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: HLKFLWRNKQDKVVSLFGSTQTA*RIPGRE
Trigger: TTCTCGCCCAGGAATTCTGCAGGCAGTCTGAGTTGA...GCCAAATAATGACACCACTTTATCCTGCTTGTTTCTCCACAGGAATTTGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp AAGCTGTCCTGTGTTCACACTAATGTCCGTGTTTTACAAGGTGACAGGTGTGTGATGATGCATCATAGGTaGAAATCGGCCCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: KLSCVHTNVRVLQGDRCVMMHHR*KSAQFS
Trigger: GGAAAATTGGGCCGATTTCCACCTATGATGCATCAT...CACACACCTGTCACCTTGTAAAACACGGACATTAGTGTGAACACAGGACAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CCA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTAAGAATAAGGGATCTTaGAGTCTGAAATCTTCATTC +
Preference number: 4 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLKNKGS*SLKSSF
Trigger: GAATGAAGATTTCAGACTCCAAGATCCCTTATTCTT...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp CACATACCTCATGATGTAATTCATGGGTGCTATCTTGTCTCAAGAAGACACACGTTCCTGCAGCTTCAATaGCCTCAAGTCTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: HIPHDVIHGCYLVSRRHTFLQLQ*PQVLTL
Trigger: CAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAA...CGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACATCATGAGGTATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGAAAAGGCCTTTAGTTTaGTCAAAATCCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: KKTQISEYGTHGLYPWALKRPLV*SKSSQS
Trigger: AGACTGGGAGGATTTTGACCAAACTAAAGGCCTTTT...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp ACAGGTGAACTATCTGTTACACCTACCAGGAAGAGTCAGACCTTTGCCCCTGAGTTTAAACTGTTTTCCTaGCACCTTATTCATGCCAAG +
Preference number: 4 (lower is better)
Translates to: TGELSVTPTRKSQTFAPEFKLFS*HLIHAK
Trigger: CTTGGCATGAATAAGGTGCCAGGAAAACAGTTTAAA...CTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CCA 90 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCATAAGGTGCATTGTATaGTTCTCAAAGGCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: SQKDPNIRVWNTWSLPLGIRCIV*FSKAVD
Trigger: ATCAACGGCCTTTGAGAACCATACAATGCACCTTAT...GCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp CACATACCTCATGATGTAATTCATGGGTGCTATCTTGTCTCAAGAAGACACACGACCACACCCAGAGGCTaGAAAAATGGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: HIPHDVIHGCYLVSRRHTTTPRG*KNGEVR
Trigger: TCTGACTTCACCATTTTTCCAGCCTCTGGGTGTGGT...CGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACATCATGAGGTATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
3UTR CAA 72 bp ACAGCAGCCCTGGCAACAAAAACCGGACCCATGATTTaGTCATCCTGGGTTGTATATACACATATAACTGTC +
Preference number: 4 (lower is better)
Translates to: TAALATKTGPMI*SSWVVYTHITV
Trigger: GACAGTTATATGTGTATATACAACCCAGGATGACAAAATCATGGGTCCGGTTTTTGTTGCCAGGGCTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp CATGATATCCATGATAGTGGCCTGATAGCTATGACACTTGAACACAGTGAAGAAGGTCACCTTGGGACTTaGGTAATGGATACTTCAGAC +
Preference number: 4 (lower is better)
Translates to: HDIHDSGLIAMTLEHSEEGHLGT*VMDTSD
Trigger: GTCTGAAGTATCCATTACTCAAGTCCCAAGGTGACC...TTCTTCACTGTGTTCAAGTGTCATAGCTATCAGGCCACTATCATGGATATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp TCCAACTTCCCTCTTGAGTTGGCACTTTGTATACAAGATCAGTCCTCATTTGTTGGTCACCTTGGGACTTaGGTAATGGATACTTCAGAC +
Preference number: 4 (lower is better)
Translates to: SNFPLELALCIQDQSSFVGHLGT*VMDTSD
Trigger: GTCTGAAGTATCCATTACTCAAGTCCCAAGGTGACC...AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCCTCACCAAAATACTTaGACATCCATGTATTTTCAC +
Preference number: 4 (lower is better)
Translates to: KKTQISEYGTHGLYPWALPHQNT*TSMYFH
Trigger: GTGAAAATACATGGATGTTCAAGTATTTTGGTGAGG...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp GCAGTTCTGTTAAGCAGAACAGGGGTAAAGGAAGCTAGATATCCAGGTAGTATCAGGCTGGAAAAATGGTaGAGTCAGAAGGTACTTAAG +
Preference number: 4 (lower is better)
Translates to: AVLLSRTGVKEARYPGSIRLEKW*SQKVLK
Trigger: CTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCT...GATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTGCTTAACAGAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp TCAAATTCCTGTGGAGAAACAAGCAGGATAAAGTGGTGTCATTATTTGGCCTTATTTGGCCTTTGCAAATaGCTCGGCAAGGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: SNSCGETSRIKWCHYLALFGLCK*LGKVRP
Trigger: AGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAA...TAAGGCCAAATAATGACACCACTTTATCCTGCTTGTTTCTCCACAGGAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR GCA 90 bp TATTTCTTCAGCAGAAAGTTCTTTTGGGTCAGGGTAATCCACCAAGATTGTTTCTTTGGCCTTTGCAAATaGCTCGGCAAGGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: YFFSRKFFWVRVIHQDCFFGLCK*LGKVRP
Trigger: AGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAA...GAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR GCA 90 bp GGCTGCTTCTGTCTCCTTCAGTTTTTCTTGCAGTTGAGCAAGCTCAAAACTGGTACCAAGATTGTTTCTTaGCTACGCTTGATACAGTCT +
Preference number: 4 (lower is better)
Translates to: GCFCLLQFFLQLSKLKTGTKIVS*LRLIQS
Trigger: AGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGT...ACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR GCA 90 bp CATCTCAAATTCCTGTGGAGAAACAAGCAGGATAAAGTGGTGTCATTATTTGGCTGTACGTCCAAGTGCTaGTTCTTTATGGCACCAGAG +
Preference number: 4 (lower is better)
Translates to: HLKFLWRNKQDKVVSLFGCTSKC*FFMAPE
Trigger: CTCTGGTGCCATAAAGAAGCAGCACTTGGACGTACA...GCCAAATAATGACACCACTTTATCCTGCTTGTTTCTCCACAGGAATTTGAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp TCCAACTTCCCTCTTGAGTTGGCACTTTGTATACAAGATCAGTCCTCATTTGTTTCATTCTCAGATCAGTaGGAGTCTTCCCTACTCTGG +
Preference number: 4 (lower is better)
Translates to: SNFPLELALCIQDQSSFVSFSDQ*ESSLLW
Trigger: CCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGA...AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTTTTAAACTGTTTTCCTaGCACCTTATTCATGCCAAG +
Preference number: 4 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSFKLFS*HLIHAK
Trigger: CTTGGCATGAATAAGGTGCCAGGAAAACAGTTTAAA...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CCA 90 bp TGTTTGAATTTGGACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTGCATTGGCCTCTGCCTCTGGTaGGAAATAGCGCATACAGGA +
Preference number: 4 (lower is better)
Translates to: CLNLDLKLFDHPSHIRCIGLCLW*EIAHTG
Trigger: TCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCC...AATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp GTTCATTTTATCTGTCAGGCTCTCTCTCGTCACACTGAGTTTTCTGAGGGTAGAAATTCATGGGGAAACTaGTTCTCTGAGAGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: VHFICQALSRHTEFSEGRNSWGN*FSERLR
Trigger: CCTTAACCTCTCAGAGAACCAGTTTCCCCATGAATT...TCTACCCTCAGAAAACTCAGTGTGACGAGAGAGAGCCTGACAGATAAAATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp ACAGGTCATCTTCCTTGCTCATGCTCATCTAAAAGGGATGTGTGGCACCCTATGACAAGCAGGATAAAGTaGTGTCATTATTTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: TGHLPCSCSSKRDVWHPMTSRIK*CHYLAL
Trigger: TAAGGCCAAATAATGACACCACTTTATCCTGCTTGT...CATAGGGTGCCACACATCCCTTTTAGATGAGCATGAGCAAGGAAGATGACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR CAA 72 bp TTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTaGAGTTGGCACTTTGTATACAAGATCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LVLCNRHTPTSL*SWHFVYKISPH
Trigger: ATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp GTTCATTTTATCTGTCAGGCTCTCTCTCGTCACACTGAGTTTTCTGAGGGTAGAAGTTTTTCTTGCAGTTaGGCAAGCTCAAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: VHFICQALSRHTEFSEGRSFSCS*ASSKLV
Trigger: TACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACT...TCTACCCTCAGAAAACTCAGTGTGACGAGAGAGAGCCTGACAGATAAAATGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309737.11
CDS-3UTR TCA 90 bp GCAGTTCTGTTAAGCAGAACAGGGGTAAAGGAAGCTAGATATCCAGGTAGTATCACGCTTGATACAGTCTaGAAGGTCATAAATTGGGTA +
Preference number: 4 (lower is better)
Translates to: AVLLSRTGVKEARYPGSITLDTV*KVINWV
Trigger: TACCCAATTTATGACCTTTCAGACTGTATCAAGCGT...GATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTGCTTAACAGAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp TCCAACTTCCCTCTTGAGTTGGCACTTTGTATACAAGATCAGTCCTCATTTGTTGGATCCTCGTCTTCATaGAAACAGCAGGAACATGTT +
Preference number: 4 (lower is better)
Translates to: SNFPLELALCIQDQSSFVGSSSS*KQQEHV
Trigger: AACATGTTCCTGCTGTTTTCATGAAGACGAGGATCC...AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp CACATACCTCATGATGTAATTCATGGGTGCTATCTTGTCTCAAGAAGACACACGATGTTCGTTCACAGGTaGACTATCTGTTACACCTAC +
Preference number: 4 (lower is better)
Translates to: HIPHDVIHGCYLVSRRHTMFVHR*TICYTY
Trigger: GTAGGTGTAACAGATAGTTCACCTGTGAACGAACAT...CGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACATCATGAGGTATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR TCA 90 bp CATGATATCCATGATAGTGGCCTGATAGCTATGACACTTGAACACAGTGAAGAAAGAAAAGAGGATGTCTaGGGCAGCATCAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: HDIHDSGLIAMTLEHSEERKEDV*GSINVP
Trigger: AGGAACATTGATGCTGCCTCAGACATCCTCTTTTCT...TTCTTCACTGTGTTCAAGTGTCATAGCTATCAGGCCACTATCATGGATATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR TCA 90 bp TGTTTGAATTTGGACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTGCATTGCTTCCTCTGTCCACTaGAAACCAGGAGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CLNLDLKLFDHPSHIRCIASSVH*KPGVQR
Trigger: CCTTTGCACTCCTGGTTTTCAGTGGACAGAGGAAGC...AATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp ACTGGGAATGTCTTTGGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTAGCATTCTTCACAATGTaGATCAAATGTTCTACACAG +
Preference number: 4 (lower is better)
Translates to: TGNVFGNVPSSNSQVLHVAFFTM*IKCSTQ
Trigger: CTGTGTAGAACATTTGATTCACATTGTGAAGAATGC...TACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR TCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCATTCCCAGCACCCTCGTaGGAAATGAAGACCGCAAGA +
Preference number: 4 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSFPAPS*EMKTAR
Trigger: TCTTGCGGTCTTCATTTCTCACGAGGGTGCTGGGAA...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCATTTGTGCTCCTGTTGTaGCCAGGAAAGGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSFVLLL*PGKGIS
Trigger: GGAGATCCCCTTTCCTGGTCACAACAGGAGCACAAA...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp CTATTTCTTCAGCAGAAAGTTCTTTTGGGTCAGGGTAATCCACCAAGATTGTTTAGAAGTCACAGTCTGTaGTCTGCTCTCACCATTAGG +
Preference number: 4 (lower is better)
Translates to: LFLQQKVLLGQGNPPRLFRSHSL*SALTIR
Trigger: CCTAATGGTGAGAGCAGAGCACAGACTGTGACTTCT...AAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR GCA 90 bp TGGCCTTACAATGGCTATTTGGAAATCACTGTGCCAATCCCAATAATAAAAGCTACTCAACTGGGGGTCTaGTTTAAAGAACCTACACCC +
Preference number: 4 (lower is better)
Translates to: WPYNGYLEITVPIPIIKATQLGV*FKEPTP
Trigger: GGGTGTAGGTTCTTTAAAGCAGACCCCCAGTTGAGT...AGCTTTTATTATTGGGATTGGCACAGTGATTTCCAAATAGCCATTGTAAGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp CTATTTCTTCAGCAGAAAGTTCTTTTGGGTCAGGGTAATCCACCAAGATTGTTTGGGTGTTTCCAGGCATaGCAGTATAGCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LFLQQKVLLGQGNPPRLFGCFQA*QYSISH
Trigger: ATGGGAAATGCTATACTGCCATGCCTGGAAACACCC...AAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CCA 90 bp TATTTCTTCAGCAGAAAGTTCTTTTGGGTCAGGGTAATCCACCAAGATTGTTTCACCACTCTTCTTTGGTaGTTTCCTCTTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: YFFSRKFFWVRVIHQDCFTTLLW*FPLAQG
Trigger: ACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGT...GAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR CCA 90 bp CATGATATCCATGATAGTGGCCTGATAGCTATGACACTTGAACACAGTGAAGAAAGAGAGAGGTCACCTTaGGACTTGAGTAATGGATAC +
Preference number: 4 (lower is better)
Translates to: HDIHDSGLIAMTLEHSEERERSP*DLSNGY
Trigger: GTATCCATTACTCAAGTCCCAAGGTGACCTCTCTCT...TTCTTCACTGTGTTCAAGTGTCATAGCTATCAGGCCACTATCATGGATATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCAAGAATAAGGGATCTTaGAGTCTGAAATCTTCATTC +
Preference number: 4 (lower is better)
Translates to: SQKDPNIRVWNTWSLPLGKNKGS*SLKSSF
Trigger: GAATGAAGATTTCAGACTCCAAGATCCCTTATTCTT...GCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp TCCCCAGAGCTAGGAAATATCAGGCTTAATTTCAGGAGGGACAGTTCTGTCTCACATCTCAAATTCCTGTaGAGAAACAAGCAGGATAAA +
Preference number: 4 (lower is better)
Translates to: SPELGNIRLNFRRDSSVSHLKFL*RNKQDK
Trigger: TTTATCCTGCTTGTTTCTCCACAGGAATTTGAGATG...TGAGACAGAACTGTCCCTCCTGAAATTAAGCCTGATATTTCCTAGCTCTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp AATATCAGGCTTAATTTCAGGAGGGACAGTTCTGTCTCAGGAGAATTATTGGAGATGTGTGGCACCCTATaGGCATTCTTACAGACTCAA +
Preference number: 4 (lower is better)
Translates to: NIRLNFRRDSSVSGELLEMCGTL*AFLQTQ
Trigger: TTGAGTCTGTAAGAATGCCCATAGGGTGCCACACAT...CTCCAATAATTCTCCTGAGACAGAACTGTCCCTCCTGAAATTAAGCCTGATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
3UTR CAA 72 bp TCTCTGCAACAGACATACTCCAACTTCCCTCTTGAGTaGGCACTTTGTATACAAGATCAGTCCTCATTTGTT +
Preference number: 4 (lower is better)
Translates to: SLQQTYSNFPLE*ALCIQDQSSFV
Trigger: AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
3UTR CAA 72 bp TGTGGAGAAACAAGCAGGATAAAGTGGTGTCATTATTaGGCCTTACAATGGCTATTTGGAAATCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: CGETSRIKWCHY*ALQWLFGNHCA
Trigger: GGCACAGTGATTTCCAAATAGCCATTGTAAGGCCAAATAATGACACCACTTTATCCTGCTTGTTTCTCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR GCA 90 bp TTCTGTCTCCTTCAGTTTTTCTTGCAGTTGAGCAAGCTCAAAACTGGTAATTTTGCTTCCTCAGCATGCTaGCTGTATATGCTTTATCGG +
Preference number: 4 (lower is better)
Translates to: FCLLQFFLQLSKLKTGNFASSAC*LYMLYR
Trigger: CCGATAAAGCATATACAGGCAGCATGCTGAGGAAGC...AAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR GCA 90 bp CACATACCTCATGATGTAATTCATGGGTGCTATCTTGTCTCAAGAAGACACACGGCTATATTGGTTCTCTaGAACAGACATACTCCAACT +
Preference number: 4 (lower is better)
Translates to: HIPHDVIHGCYLVSRRHTAILVL*NRHTPT
Trigger: AGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGC...CGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACATCATGAGGTATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR GCA 90 bp TCCAACTTCCCTCTTGAGTTGGCACTTTGTATACAAGATCAGTCCTCATTTGTTTTCAACAACTCTTTCTaGCAAGAGTGTCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SNFPLELALCIQDQSSFVFNNSF*QECPLF
Trigger: GAAGAGAGGACACTCTTGGCAGAAAGAGTTGTTGAA...AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp CATCTCAAATTCCTGTGGAGAAACAAGCAGGATAAAGTGGTGTCATTATTTGGCATGATGCATCATAGGTaGAAATCGGCCCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: HLKFLWRNKQDKVVSLFGMMHHR*KSAQFS
Trigger: GGAAAATTGGGCCGATTTCCACCTATGATGCATCAT...GCCAAATAATGACACCACTTTATCCTGCTTGTTTCTCCACAGGAATTTGAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp TGGCCTTACAATGGCTATTTGGAAATCACTGTGCCAATCCCAATAATAAAAGCTCCCAAAACCGTAGATTaGAATAATCTGCCCCATCAG +
Preference number: 4 (lower is better)
Translates to: WPYNGYLEITVPIPIIKAPKTVD*NNLPHQ
Trigger: CTGATGGGGCAGATTATTCCAATCTACGGTTTTGGG...AGCTTTTATTATTGGGATTGGCACAGTGATTTCCAAATAGCCATTGTAAGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp GAGGAAATTAAATGTACGTCCAAGTGCTGCTTCTTTATGGCACCAGAGAACAAGCTTACAATGGCTATTTaGAAATCACTGTGCCAATCC +
Preference number: 4 (lower is better)
Translates to: EEIKCTSKCCFFMAPENKLTMAI*KSLCQS
Trigger: GGATTGGCACAGTGATTTCCAAATAGCCATTGTAAG...CTTGTTCTCTGGTGCCATAAAGAAGCAGCACTTGGACGTACATTTAATTTCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR TCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCAGGTCACCTTGGGACTTaGGTAATGGATACTTCAGAC +
Preference number: 4 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSGHLGT*VMDTSD
Trigger: GTCTGAAGTATCCATTACTCAAGTCCCAAGGTGACC...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR TCA 90 bp CACATACCTCATGATGTAATTCATGGGTGCTATCTTGTCTCAAGAAGACACACGGTCTTACATGTAAACTaGATTCACACATACCTCATG +
Preference number: 4 (lower is better)
Translates to: HIPHDVIHGCYLVSRRHTVLHVN*IHTYLM
Trigger: CATGAGGTATGTGTGAATTCAGTTTACATGTAAGAC...CGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACATCATGAGGTATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR GCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCAAGAAGTCACAGTCTGTaGTCTGCTCTCACCATTAGG +
Preference number: 4 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSRSHSL*SALTIR
Trigger: CCTAATGGTGAGAGCAGAGCACAGACTGTGACTTCT...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309737.11
CDS-3UTR GCA 90 bp TGTTTGAATTTGGACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTGCATTCTCAGGGTAGCTATCTaGACTGAATCCAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: CLNLDLKLFDHPSHIRCILRVAI*TESSIL
Trigger: GAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAG...AATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp TGTTTGAATTTGGACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTGCATTGCAGGAACATGTTTCTaGCTTTGGATCACACGAGGT +
Preference number: 4 (lower is better)
Translates to: CLNLDLKLFDHPSHIRCIAGTCF*LWITRG
Trigger: ACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGC...AATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp TCCAACTTCCCTCTTGAGTTGGCACTTTGTATACAAGATCAGTCCTCATTTGTTACTTCCCTCTTGAGTTaGCACTTTGTATACAAGATC +
Preference number: 4 (lower is better)
Translates to: SNFPLELALCIQDQSSFVTSLLS*HFVYKI
Trigger: GATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGT...AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCAGACTGGGAATGTCTTTaGGAATGTGCCCTCTTCGAA +
Preference number: 4 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSDWECL*ECALFE
Trigger: TTCGAAGAGGGCACATTCCCAAAGACATTCCCAGTC...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CCA 90 bp TGTTTGAATTTGGACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTGCATTGACTGGGAATGTCTTTaGGAATGTGCCCTCTTCGAA +
Preference number: 4 (lower is better)
Translates to: CLNLDLKLFDHPSHIRCIDWECL*ECALFE
Trigger: TTCGAAGAGGGCACATTCCCAAAGACATTCCCAGTC...AATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp CACATACCTCATGATGTAATTCATGGGTGCTATCTTGTCTCAAGAAGACACACGTCTACATTTCATGACTaGGAATGTCTTTGGGAATGT +
Preference number: 4 (lower is better)
Translates to: HIPHDVIHGCYLVSRRHTSTFHD*ECLWEC
Trigger: ACATTCCCAAAGACATTCCCAGTCATGAAATGTAGA...CGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACATCATGAGGTATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCAGTCTCAGGGCTTGCTTaGACCCTAACCCATTTAAAC +
Preference number: 4 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSVSGLA*TLTHLN
Trigger: GTTTAAATGGGTTAGGGTCCAAGCAAGCCCTGAGAC...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp TATTTCTTCAGCAGAAAGTTCTTTTGGGTCAGGGTAATCCACCAAGATTGTTTCAGTTTTTCTTGCAGTTaGGCAAGCTCAAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: YFFSRKFFWVRVIHQDCFSFSCS*ASSKLV
Trigger: TACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACT...GAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR TCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCAAGAAAAGAGGATGTCTaGGGCAGCATCAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSRKEDV*GSINVP
Trigger: AGGAACATTGATGCTGCCTCAGACATCCTCTTTTCT...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR TCA 90 bp CATGATATCCATGATAGTGGCCTGATAGCTATGACACTTGAACACAGTGAAGAACCTCACCAAAATACTTaGACATCCATGTATTTTCAC +
Preference number: 4 (lower is better)
Translates to: HDIHDSGLIAMTLEHSEEPHQNT*TSMYFH
Trigger: GTGAAAATACATGGATGTTCAAGTATTTTGGTGAGG...TTCTTCACTGTGTTCAAGTGTCATAGCTATCAGGCCACTATCATGGATATCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCATCCACAGCTAGAAAATaGAGGGACAGATTATGGCTC +
Preference number: 4 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSSTARK*RDRLWL
Trigger: GAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGA...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR TCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCAATGTTCGTTCACAGGTaGACTATCTGTTACACCTAC +
Preference number: 4 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSMFVHR*TICYTY
Trigger: GTAGGTGTAACAGATAGTTCACCTGTGAACGAACAT...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CCA 90 bp TGTTTGAATTTGGACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTGCATTTGGGCACTGCTATATTaGTTCTCTGCAACAGACATA +
Preference number: 4 (lower is better)
Translates to: CLNLDLKLFDHPSHIRCIWALLY*FSATDI
Trigger: TATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCA...AATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp ATTATTTGGCCTTACAATGGCTATTTGGAAATCACTGTGCCAATCCCAATAATATTTTTGGCAGGGGAGTaGATTGAATTGTATCACTCA +
Preference number: 4 (lower is better)
Translates to: IIWPYNGYLEITVPIPIIFLAGE*IELYHS
Trigger: TGAGTGATACAATTCAATGCACTCCCCTGCCAAAAA...TATTATTGGGATTGGCACAGTGATTTCCAAATAGCCATTGTAAGGCCAAATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCAAAAAGGCCTTTAGTTTaGTCAAAATCCTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSKRPLV*SKSSQS
Trigger: AGACTGGGAGGATTTTGACCAAACTAAAGGCCTTTT...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR TCA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCACAATTGACTGCTAAATaGATGAATGAGCTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSQLTAK*MNELEE
Trigger: CTCTTCTAGCTCATTCATTCATTTAGCAGTCAATTG...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR GCA 90 bp TGTTTGAATTTGGACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTGCATTGATGTAATTCATGGGTaGTATCTTGTCTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: CLNLDLKLFDHPSHIRCIDVIHG*YLVSRR
Trigger: TCTTCTTGAGACAAGATAGCACCCATGAATTACATC...AATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCAAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CCA 90 bp TATTTGGCCTTACAATGGCTATTTGGAAATCACTGTGCCAATCCCAATAATAAAAGTGGTGTCATTATTTaGCCTTACAATGGCTATTTG +
Preference number: 4 (lower is better)
Translates to: YLALQWLFGNHCANPNNKSGVII*PYNGYL
Trigger: CAAATAGCCATTGTAAGGCCAAATAATGACACCACT...TTTATTATTGGGATTGGCACAGTGATTTCCAAATAGCCATTGTAAGGCCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CCA 90 bp TATTTGGCCTTACAATGGCTATTTGGAAATCACTGTGCCAATCCCAATAATAAATATTTGGCCTTACAATaGCTATTTGGAAATCACTGT +
Preference number: 4 (lower is better)
Translates to: YLALQWLFGNHCANPNNKYLALQ*LFGNHC
Trigger: ACAGTGATTTCCAAATAGCCATTGTAAGGCCAAATA...TTTATTATTGGGATTGGCACAGTGATTTCCAAATAGCCATTGTAAGGCCAAATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS GCA 90 bp CCCAGAAGCCAGAGCGACTCTCTGCACTGTGGAGTACGCCATGACTaGTCACGGTGGTCGCAGGTGCAGACGCCAGCCGGAACCGGAACC +
Preference number: 5 (lower is better)
Translates to: PRSQSDSLHCGVRHD*SRWSQVQTPAGTGT
Trigger: GGTTCCGGTTCCGGCTGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS CCA 90 bp CAGAGCGACTCTCTGCACTGTGGAGTACGCCATGACTGCTCACGGTaGTCGCAGGTGCAGACGCCAGCCGGAACCGGAACCGGAACCGGA +
Preference number: 5 (lower is better)
Translates to: QSDSLHCGVRHDCSR*SQVQTPAGTGTGTG
Trigger: TCCGGTTCCGGTTCCGGTTCCGGCTGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343202.8
CDS GCA 90 bp AGCAGCGACAGAGCCAGGACAAGCCCAGAAGCCAGAGCGACTCTCTaGACTGTGGAGTACGCCATGACTGCTCACGGTGGTCGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SSDRARTSPEARATL*TVEYAMTAHGGRRC
Trigger: GCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGGCTTGTCCTGGCTCTGTCGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000419822.2
ENST00000526962.1
ENST00000531450.1
CDS-3UTR CAA 90 bp TGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAGGGCAGGGAAGAGTCAGACCTTaGCCCCTGAGTGGTCCCATC +
Preference number: 5 (lower is better)
Translates to: WAGLPAASMASSLDSAGQGRVRP*PLSGPI
Trigger: GATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCC...CTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCGGGACAGGAAGGCCTaGGGCAGCAGCAGCGACAGA +
Preference number: 5 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLRDRKA*GSSSDR
Trigger: TCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCG...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp TCTAGACAGGAGGGCAAAGTGAGTCTTCTGCCTCTAATTCACAGTACAGGGGCCCGGGACAGGAAGGCCTaGGGCAGCAGCAGCGACAGA +
Preference number: 5 (lower is better)
Translates to: SRQEGKVSLLPLIHSTGARDRKA*GSSSDR
Trigger: TCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCG...GGCCCCTGTACTGTGAATTAGAGGCAGAAGACTCACTTTGCCCTCCTGTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CAA 90 bp GCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTACCCTCCTCTGGGCCCATGGAAGAGTCAGACCTTaGCCCCTGAGTGGTCCCATC +
Preference number: 5 (lower is better)
Translates to: ARKRLQLRQQSLTLLWAHGRVRP*PLSGPI
Trigger: GATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCC...ATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp ATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCCGGGACAGGAAGGCCTaGGGCAGCAGCAGCGACAGA +
Preference number: 5 (lower is better)
Translates to: MVSTPGHCYIGSLQQTYSRDRKA*GSSSDR
Trigger: TCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCG...GGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp ATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCCTCCACCTGATCCTTaGGCCTTTGCAAATGCCTCG +
Preference number: 5 (lower is better)
Translates to: ILSPLIGLQPPHGRTIPGPPPDP*AFANAS
Trigger: CGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGG...CCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CAA 90 bp GCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTACCCTCCTCTGGGCCCATCCTCCACCTGATCCTTaGGCCTTTGCAAATGCCTCG +
Preference number: 5 (lower is better)
Translates to: ARKRLQLRQQSLTLLWAHPPPDP*AFANAS
Trigger: CGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGG...ATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CAA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCAGGAAGAGTCAGACCTTaGCCCCTGAGTGGTCCCATC +
Preference number: 5 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSGRVRP*PLSGPI
Trigger: GATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCC...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCACAATGGCCTCAAGTCTaGACTCTGCAGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSQWPQV*TLQGRV
Trigger: GACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATTG...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCATGGGACCACTCTTCTTaGGTGGTTTCCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LEPSYRVAASSWQDHPWAWDHSS*VVSSCS
Trigger: TGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCA...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGCGGGACAGGAAGGCCTaGGGCAGCAGCAGCGACAGA +
Preference number: 5 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLRDRKA*GSSSDR
Trigger: TCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCG...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGTTTGGTGGTTTCCTCTaGCTCAGGGTAGCTATCTGC +
Preference number: 5 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQEFGGFL*LRVAIC
Trigger: GCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAA...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTAGCCCTCTTATAGGGTaGCAGCCTCCTCATGGCAGG +
Preference number: 5 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLSPLIG*QPPHGR
Trigger: CCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCT...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp GGCAGGACCATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGGCAGAATTCACAATCTaGAGCCCTCTTATAGGGTTG +
Preference number: 5 (lower is better)
Translates to: GRTIPGQGFLQLQWPQVLAEFTI*SPLIGL
Trigger: CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGC...CAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp TGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAGGGCAGCTGGGCACTGCTATATaGGTTCTCTGCAACAGACAT +
Preference number: 5 (lower is better)
Translates to: WAGLPAASMASSLDSAGQLGTAI*VLCNRH
Trigger: ATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG...CTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCAGGTTCTCAAAGGCCGTaGATTCTACAGGCCAAATAC +
Preference number: 5 (lower is better)
Translates to: LEPSYRVAASSWQDHPWAGSQRP*ILQAKY
Trigger: GTATTTGGCCTGTAGAATCAACGGCCTTTGAGAACC...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp CCTAGGAAGACCCTCGCTGCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTCACCTACCACATGCTTaGCCCTGGCACAGACACTTT +
Preference number: 5 (lower is better)
Translates to: PRKTLAARKRLQLRQQSLHLPHA*PWHRHF
Trigger: AAAGTGTCTGTGCCAGGGCAAAGCATGTGGTAGGTG...AAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGCAGCGAGGGTCTTCCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCATCCCATCCTCTGCAGTaGTTTTCCCCTTTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSSHPLQ*FSPLRA
Trigger: AGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGA...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CAA 90 bp GGCAGGACCATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGCTGAAAGGTCATAAATaGGGTAAGTCTCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: GRTIPGQGFLQLQWPQVLLKGHK*GKSLQG
Trigger: ACCCTGAAGAGACTTACCCAATTTATGACCTTTCAG...CAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp GATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGCAGAAAGTTCTTTaGGGTCAGGGTAATCCACCA +
Preference number: 5 (lower is better)
Translates to: DSLPYCWLPGLLSSSWQEQQKVL*GQGNPP
Trigger: TGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTG...CTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CAGGGTAACCTTCCCAGTCCTCCATGTAAGGGGCCTCCTCAGCTTCTTTCTCTGTGGGACCACTCTTCTTaGGTGGTTTCCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: QGNLPSPPCKGPPQLLSLWDHSS*VVSSCS
Trigger: TGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCA...CAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR CAA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGAGCCCTCTTATAGGGTaGCAGCCTCCTCATGGCAGG +
Preference number: 5 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLSPLIG*QPPHGR
Trigger: CCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCT...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCACAGTTTTTCTTGCAGTaGAGCAAGCTCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: LEPSYRVAASSWQDHPWAQFFLQ*SKLKTG
Trigger: ACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTG...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CAA 90 bp CATCCCTGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCACACCAAGATTGTTTCTaGCCTACGCTTGATACAGTC +
Preference number: 5 (lower is better)
Translates to: HPWAGLPAASMASSLDSAHQDCF*PTLDTV
Trigger: GACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTG...TGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCACAGCAGAAAGTTCTTTaGGGTCAGGGTAATCCACCA +
Preference number: 5 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSQQKVL*GQGNPP
Trigger: TGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTG...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGGGAAGAGTCAGACCTTaGCCCCTGAGTGGTCCCATC +
Preference number: 5 (lower is better)
Translates to: KKTQISEYGTHGLYPWALGRVRP*PLSGPI
Trigger: GATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCC...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CCTAGGAAGACCCTCGCTGCGAGGAAGAGGCTTCAGCTTAGACAGCAGAGTCTTGTTTCTTGCCTACGCTaGATACAGTCTGAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: PRKTLAARKRLQLRQQSLVSCLR*IQSERS
Trigger: TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAAC...AAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGCAGCGAGGGTCTTCCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CAGGGTAACCTTCCCAGTCCTCCATGTAAGGGGCCTCCTCAGCTTCTTTCTCTGCACCAAGATTGTTTCTaGCCTACGCTTGATACAGTC +
Preference number: 5 (lower is better)
Translates to: QGNLPSPPCKGPPQLLSLHQDCF*PTLDTV
Trigger: GACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTG...CAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR CAA 90 bp TGGGCAGGGCTTCCTGCAGCTTCAATGGCCTCAAGTCTTGACTCTGCAGGGCAGTTCATCTTTAAAGTCTaGGGACCACTCTTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: WAGLPAASMASSLDSAGQFIFKV*GPLFFG
Trigger: ACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAA...CTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp AAGCTGTCCTGTGTTCACACTAATGTCCGTGTTTTACAAGGTGACAGGTGTGTGCAATGGCCTCAAGTCTaGACTCTGCAGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: KLSCVHTNVRVLQGDRCVQWPQV*TLQGRV
Trigger: GACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATTG...CACACACCTGTCACCTTGTAAAACACGGACATTAGTGTGAACACAGGACAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGAGCCCTCTTATAGGGTaGCAGCCTCCTCATGGCAGG +
Preference number: 5 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLSPLIG*QPPHGR
Trigger: CCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCT...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCAGCAGAATTCACAATCTaGAGCCCTCTTATAGGGTTG +
Preference number: 5 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSAEFTI*SPLIGL
Trigger: CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGC...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAACTCCAACTTCCCTCTaGAGTTGGCACTTTGTATAC +
Preference number: 5 (lower is better)
Translates to: HRFSPLLLASWPSELLMATPTSL*SWHFVY
Trigger: GTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAGT...TGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp TTTCTTCAGCAGAAAGTTCTTTTGGGTCAGGGTAATCCACCAAGATTGTTTCTTCGGGACAGGAAGGCCTaGGGCAGCAGCAGCGACAGA +
Preference number: 5 (lower is better)
Translates to: FLQQKVLLGQGNPPRLFLRDRKA*GSSSDR
Trigger: TCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCG...AAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR CAA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTGATCCTTTGGCCTTaGCAAATGCCTCGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: KKTQISEYGTHGLYPWALLILWP*QMPRQG
Trigger: ACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAG...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CAA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGATCCTTTGGCCTTaGCAAATGCCTCGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: LKKTQISEYGTHGLYPWALILWP*QMPRQG
Trigger: ACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAG...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CAA 90 bp TCTAAAAGGGATGTGTGGCACCCTATGGGCATTCTTACAGACTCAACTCAGACTCCTCCACCTGATCCTTaGGCCTTTGCAAATGCCTCG +
Preference number: 5 (lower is better)
Translates to: SKRDVWHPMGILTDSTQTPPPDP*AFANAS
Trigger: CGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGG...AGTCTGAGTTGAGTCTGTAAGAATGCCCATAGGGTGCCACACATCCCTTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CAA 90 bp TTATCGGTGCTGATGCCCAACCCTTCATCTTTAAAGTCTTGGGACCACTCTTCTCCTCCACCTGATCCTTaGGCCTTTGCAAATGCCTCG +
Preference number: 5 (lower is better)
Translates to: LSVLMPNPSSLKSWDHSSPPPDP*AFANAS
Trigger: CGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGG...AGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CAA 90 bp CTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTTCCCATCCTCTGCAGTaGTTTTCCCCTTTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: LMAGAEFTILSPLIGLQPSHPLQ*FSPLRA
Trigger: AGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGA...AGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CAA 90 bp ACAGGTGAACTATCTGTTACACCTACCAGGAAGAGTCAGACCTTTGCCCCTGAGTTTGGTGGTTTCCTCTaGCTCAGGGTAGCTATCTGC +
Preference number: 5 (lower is better)
Translates to: TGELSVTPTRKSQTFAPEFGGFL*LRVAIC
Trigger: GCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAA...CTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CCTTTGCAAATGCCTCGGCAAGGTGAGACCTCTGGAAACGAGCCCCAGGAGTCTTTCATCTTTAAAGTCTaGGGACCACTCTTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: PLQMPRQGETSGNEPQESFIFKV*GPLFFG
Trigger: ACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAA...AGACTCCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CAA 90 bp ATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGAACTTCCCTCTTGAGTaGGCACTTTGTATACAAGAT +
Preference number: 5 (lower is better)
Translates to: ILSPLIGLQPPHGRTIPGNFPLE*ALCIQD
Trigger: ATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTT...CCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTCTTGCTCAGGGTAGCTATCTGCACTGAATCCAGCATTCTCTGCCAAGACAGCCTGGGCACTGCTATATaGGTTCTCTGCAACAGACAT +
Preference number: 5 (lower is better)
Translates to: LLLRVAICTESSILCQDSLGTAI*VLCNRH
Trigger: ATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG...GCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526962.1
CDS-3UTR CAA 90 bp CTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCAGGACCATCCCTGGGCAGAAAGAGGGTTTTGTTaGTTTAGTCATCAGGTTCAA +
Preference number: 5 (lower is better)
Translates to: LEPSYRVAASSWQDHPWAERGFC*FSHQVQ
Trigger: TTGAACCTGATGACTAAACAAACAAAACCCTCTTTC...TGCCCAGGGATGGTCCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp CAGGGTAACCTTCCCAGTCCTCCATGTAAGGGGCCTCCTCAGCTTCTTTCTCTGTTAGGTCCCACTCTGTaGATTAATTTTTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: QGNLPSPPCKGPPQLLSLLGPTL*INFSMA
Trigger: AGCCATGGAAAAATTAATCAACAGAGTGGGACCTAA...CAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CAA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCAGAAAGTTCTTTaGGGTCAGGGTAATCCACCA +
Preference number: 5 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLQQKVL*GQGNPP
Trigger: TGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTG...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTGCCAAGACAGCAGGATCCTCGTCTTCATGAAAACAGCAGGAACATGTTTCTGTTTGGTGGTTTCCTCTaGCTCAGGGTAGCTATCTGC +
Preference number: 5 (lower is better)
Translates to: LPRQQDPRLHENSRNMFLFGGFL*LRVAIC
Trigger: GCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAA...CAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR CAA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGATGGGACCACTCTTCTTaGGTGGTTTCCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRWDHSS*VVSSCS
Trigger: TGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCA...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp GCAGAGTCTTACCCTCCTCTGGGCCCATTAGCCCCACAAACAAAATGTTCTCTTAAGGTACTTCTGGGCTaGGCAGTTCTGTTAAGCAGA +
Preference number: 5 (lower is better)
Translates to: AESYPPLGPLAPQTKCSLKVLLG*AVLLSR
Trigger: TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTT...AAGAGAACATTTTGTTTGTGGGGCTAATGGGCCCAGAGGAGGGTAAGACTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CCCTATTGCTGGCTTCCTGGCCTTCTGAGCTCCTCATGGCAGGAGCAGAATTCAAACTTCCCTCTTGAGTaGGCACTTTGTATACAAGAT +
Preference number: 5 (lower is better)
Translates to: PYCWLPGLLSSSWQEQNSNFPLE*ALCIQD
Trigger: ATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTT...TGAATTCTGCTCCTGCCATGAGGAGCTCAGAAGGCCAGGAAGCCAGCAATAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTACTCCAACTTCCCTCTaGAGTTGGCACTTTGTATAC +
Preference number: 5 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLTPTSL*SWHFVY
Trigger: GTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAGT...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp GGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATGGCGAAAAGGCCTTTAGTTaGGTCAAAATCCTCCCAGTC +
Preference number: 5 (lower is better)
Translates to: GAEFTILSPLIGLQPPHGEKAFS*VKILPV
Trigger: GACTGGGAGGATTTTGACCAAACTAAAGGCCTTTTC...GCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTACCGGACCCATGATTTaGTCATCCTGGGTTGTATAT +
Preference number: 5 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLTGPMI*SSWVVY
Trigger: ATATACAACCCAGGATGACAAAATCATGGGTCCGGT...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp AAGCTGTCCTGTGTTCACACTAATGTCCGTGTTTTACAAGGTGACAGGTGTGTGCACCTACCACATGCTTaGCCCTGGCACAGACACTTT +
Preference number: 5 (lower is better)
Translates to: KLSCVHTNVRVLQGDRCVHLPHA*PWHRHF
Trigger: AAAGTGTCTGTGCCAGGGCAAAGCATGTGGTAGGTG...CACACACCTGTCACCTTGTAAAACACGGACATTAGTGTGAACACAGGACAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp GCAGAGTCTTACCCTCCTCTGGGCCCATTAGCCCCACAAACAAAATGTTCTCTTCACCAAGATTGTTTCTaGCCTACGCTTGATACAGTC +
Preference number: 5 (lower is better)
Translates to: AESYPPLGPLAPQTKCSLHQDCF*PTLDTV
Trigger: GACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTG...AAGAGAACATTTTGTTTGTGGGGCTAATGGGCCCAGAGGAGGGTAAGACTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp AAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTACACCAAGATTGTTTCTaGCCTACGCTTGATACAGTC +
Preference number: 5 (lower is better)
Translates to: KTQISEYGTHGLYPWALLHQDCF*PTLDTV
Trigger: GACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTG...TAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTGCAGCAGAAAGTTCTTTaGGGTCAGGGTAATCCACCA +
Preference number: 5 (lower is better)
Translates to: LGTAILVLCNRHTPTSLLQQKVL*GQGNPP
Trigger: TGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTG...CAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp AAGCTGTCCTGTGTTCACACTAATGTCCGTGTTTTACAAGGTGACAGGTGTGTGTTTGGTGGTTTCCTCTaGCTCAGGGTAGCTATCTGC +
Preference number: 5 (lower is better)
Translates to: KLSCVHTNVRVLQGDRCVFGGFL*LRVAIC
Trigger: GCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAA...CACACACCTGTCACCTTGTAAAACACGGACATTAGTGTGAACACAGGACAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGTGGGACCACTCTTCTTaGGTGGTTTCCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLWDHSS*VVSSCS
Trigger: TGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCA...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCAAAGGTACTTCTGGGCTaGGCAGTTCTGTTAAGCAGA +
Preference number: 5 (lower is better)
Translates to: LKKTQISEYGTHGLYPWAKVLLG*AVLLSR
Trigger: TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTT...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CATGATATCCATGATAGTGGCCTGATAGCTATGACACTTGAACACAGTGAAGAACAATGGCCTCAAGTCTaGACTCTGCAGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: HDIHDSGLIAMTLEHSEEQWPQV*TLQGRV
Trigger: GACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATTG...TTCTTCACTGTGTTCAAGTGTCATAGCTATCAGGCCACTATCATGGATATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGGAAAAGGCCTTTAGTTaGGTCAAAATCCTCCCAGTC +
Preference number: 5 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLEKAFS*VKILPV
Trigger: GACTGGGAGGATTTTGACCAAACTAAAGGCCTTTTC...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp ATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCGAAAAGGCCTTTAGTTaGGTCAAAATCCTCCCAGTC +
Preference number: 5 (lower is better)
Translates to: MVSTPGHCYIGSLQQTYSEKAFS*VKILPV
Trigger: GACTGGGAGGATTTTGACCAAACTAAAGGCCTTTTC...GGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp GAGCTCCTCATGGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGTTCATGGGTGCTATCTaGTCTCAAGAAGACACACGT +
Preference number: 5 (lower is better)
Translates to: ELLMAGAEFTILSPLIGLFMGAI*SQEDTR
Trigger: ACGTGTGTCTTCTTGAGACAAGATAGCACCCATGAA...CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CAA 90 bp AAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGGGTTCTCAAAGGCCGTaGATTCTACAGGCCAAATAC +
Preference number: 5 (lower is better)
Translates to: KKTQISEYGTHGLYPWALGSQRP*ILQAKY
Trigger: GTATTTGGCCTGTAGAATCAACGGCCTTTGAGAACC...CAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTTGTCTCAGGGCTTGCTaGGACCCTAACCCATTTAAA +
Preference number: 5 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSCLRAC*DPNPFK
Trigger: TTTAAATGGGTTAGGGTCCAAGCAAGCCCTGAGACA...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp TCTAGACAGGAGGGCAAAGTGAGTCTTCTGCCTCTAATTCACAGTACAGGGGCCCCTTACAATGGCTATTaGGAAATCACTGTGCCAATC +
Preference number: 5 (lower is better)
Translates to: SRQEGKVSLLPLIHSTGAPYNGY*EITVPI
Trigger: GATTGGCACAGTGATTTCCAAATAGCCATTGTAAGG...GGCCCCTGTACTGTGAATTAGAGGCAGAAGACTCACTTTGCCCTCCTGTCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CAA 90 bp GGCAGGAGCAGAATTCACAATCTTGAGCCCTCTTATAGGGTTGCAGCCTCCTCATTAGGTCCCACTCTGTaGATTAATTTTTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: GRSRIHNLEPSYRVAASSLGPTL*INFSMA
Trigger: AGCCATGGAAAAATTAATCAACAGAGTGGGACCTAA...TGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CAA 90 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCGTTTCTTGCCTACGCTaGATACAGTCTGAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: SQKDPNIRVWNTWSLPLGVSCLR*IQSERS
Trigger: TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAAC...GCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTGGTTTCTTGCCTACGCTaGATACAGTCTGAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: LGTAILVLCNRHTPTSLLVSCLR*IQSERS
Trigger: TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAAC...CAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTGCCAAGACAGCAGGATCCTCGTCTTCATGAAAACAGCAGGAACATGTTTCTGCACCAAGATTGTTTCTaGCCTACGCTTGATACAGTC +
Preference number: 5 (lower is better)
Translates to: LPRQQDPRLHENSRNMFLHQDCF*PTLDTV
Trigger: GACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTG...CAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526962.1
ENST00000528463.5
CDS-3UTR CAA 90 bp TCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCGCAGAATTCACAATCTaGAGCCCTCTTATAGGGTTG +
Preference number: 5 (lower is better)
Translates to: SQKDPNIRVWNTWSLPLGAEFTI*SPLIGL
Trigger: CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGC...GCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGATTCATGGGTGCTATCTaGTCTCAAGAAGACACACGT +
Preference number: 5 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRFMGAI*SQEDTR
Trigger: ACGTGTGTCTTCTTGAGACAAGATAGCACCCATGAA...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CAA 90 bp ATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGTCCCAGATTATGCAGTaGTTTTGTGAGCTAACTGTC +
Preference number: 5 (lower is better)
Translates to: MEHMVSTPGHCYIGSLQQSQIMQ*FCELTV
Trigger: GACAGTTAGCTCACAAAACAACTGCATAATCTGGGA...CTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTGGTAATAATTCGGGTTaGTTTATTCCCCCAGATCTA +
Preference number: 5 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLGNNSG*FIPPDL
Trigger: TAGATCTGGGGGAATAAACAAACCCGAATTATTACC...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp ACTGGGAATGTCTTTGGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTAAAAAGACCCAACCACTaGATGTCTCAGGGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: TGNVFGNVPSSNSQVLHVKRPNH*MSQGLL
Trigger: AAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTTT...TACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTTGTGCAATGACAAACTaGGTATTTTCCCATGTTGAC +
Preference number: 5 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLCAMTN*VFSHVD
Trigger: GTCAACATGGGAAAATACCAAGTTTGTCATTGCACA...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp CTCAACTCAGACTGCCTGCAGAATTCCTGGGCGAGAAAGAACTCATCTTATTTATGGCAGGGGAGTGCATaGAATTGTATCACTCACTGG +
Preference number: 5 (lower is better)
Translates to: LNSDCLQNSWARKNSSYLWQGSA*NCITHW
Trigger: CCAGTGAGTGATACAATTCAATGCACTCCCCTGCCA...TAAATAAGATGAGTTCTTTCTCGCCCAGGAATTCTGCAGGCAGTCTGAGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CAA 90 bp AATATCAGGCTTAATTTCAGGAGGGACAGTTCTGTCTCAGGAGAATTATTGGAGCTGATCCTTTGGCCTTaGCAAATGCCTCGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: NIRLNFRRDSSVSGELLELILWP*QMPRQG
Trigger: ACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAG...CTCCAATAATTCTCCTGAGACAGAACTGTCCCTCCTGAAATTAAGCCTGATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CAA 90 bp TATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTCCTTCAGTTTTTCTaGCAGTTGAGCAAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: YPSMEHMVSTPGHCYIGSLLQFF*QLSKLK
Trigger: TTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAG...AGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CAA 90 bp CTGAAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGACTGAAAGGTCATAAATaGGGTAAGTCTCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: LKTRSAKVLLGLAVLLSRLKGHK*GKSLQG
Trigger: ACCCTGAAGAGACTTACCCAATTTATGACCTTTCAG...TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp ATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCTTCATCTTTAAAGTCTaGGGACCACTCTTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: MVSTPGHCYIGSLQQTYSFIFKV*GPLFFG
Trigger: ACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAA...GGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp GCAGAGTCTTACCCTCCTCTGGGCCCATTAGCCCCACAAACAAAATGTTCTCTTAACTTCCCTCTTGAGTaGGCACTTTGTATACAAGAT +
Preference number: 5 (lower is better)
Translates to: AESYPPLGPLAPQTKCSLNFPLE*ALCIQD
Trigger: ATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTT...AAGAGAACATTTTGTTTGTGGGGCTAATGGGCCCAGAGGAGGGTAAGACTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CTCTCTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGACTCCAACTTCCCTCTaGAGTTGGCACTTTGTATAC +
Preference number: 5 (lower is better)
Translates to: LSQKDPNIRVWNTWSLPLTPTSL*SWHFVY
Trigger: GTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAGT...CAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp ACTGGGAATGTCTTTGGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTAACTCCAACTTCCCTCTaGAGTTGGCACTTTGTATAC +
Preference number: 5 (lower is better)
Translates to: TGNVFGNVPSSNSQVLHVTPTSL*SWHFVY
Trigger: GTATACAAAGTGCCAACTCAAGAGGGAAGTTGGAGT...TACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CAA 90 bp GCAGTTCTGTTAAGCAGAACAGGGGTAAAGGAAGCTAGATATCCAGGTAGTATCCTGGGCACTGCTATATaGGTTCTCTGCAACAGACAT +
Preference number: 5 (lower is better)
Translates to: AVLLSRTGVKEARYPGSILGTAI*VLCNRH
Trigger: ATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG...GATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTGCTTAACAGAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp ACTGGGAATGTCTTTGGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTAGAAAAGGCCTTTAGTTaGGTCAAAATCCTCCCAGTC +
Preference number: 5 (lower is better)
Translates to: TGNVFGNVPSSNSQVLHVEKAFS*VKILPV
Trigger: GACTGGGAGGATTTTGACCAAACTAAAGGCCTTTTC...TACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CAA 90 bp AGGACTGTCCATAAGCACACAGATTCTCTCCCCTATTGCTGGCTTCCTGGCCTTGAAAGAGGGTTTTGTTaGTTTAGTCATCAGGTTCAA +
Preference number: 5 (lower is better)
Translates to: RTVHKHTDSLPYCWLPGLERGFC*FSHQVQ
Trigger: TTGAACCTGATGACTAAACAAACAAAACCCTCTTTC...AAGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp ACAGGTGAACTATCTGTTACACCTACCAGGAAGAGTCAGACCTTTGCCCCTGAGGGTAATAATTCGGGTTaGTTTATTCCCCCAGATCTA +
Preference number: 5 (lower is better)
Translates to: TGELSVTPTRKSQTFAPEGNNSG*FIPPDL
Trigger: TAGATCTGGGGGAATAAACAAACCCGAATTATTACC...CTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp CTGGGCACTGCTATATTGGTTCTCTGCAACAGACATACTCCAACTTCCCTCTTGTATACCTTTCATTCATaGTTTCCTAGGAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LGTAILVLCNRHTPTSLLYTFHS*FPRSLR
Trigger: CCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATA...CAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp CTCAAAAAGACCCAAATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCATATACCTTTCATTCATaGTTTCCTAGGAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LKKTQISEYGTHGLYPWAYTFHS*FPRSLR
Trigger: CCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATA...TGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATTTGGGTCTTTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp AATATCCGAGTATGGAACACATGGTCTCTACCCCTGGGCACTGCTATATTGGTTCAGTTTTTCTTGCAGTaGAGCAAGCTCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: NIRVWNTWSLPLGTAILVQFFLQ*SKLKTG
Trigger: ACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTG...AACCAATATAGCAGTGCCCAGGGGTAGAGACCATGTGTTCCATACTCGGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CAA 90 bp GGCTGCTTCTGTCTCCTTCAGTTTTTCTTGCAGTTGAGCAAGCTCAAAACTGGTCAGTTTTTCTTGCAGTaGAGCAAGCTCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: GCFCLLQFFLQLSKLKTGQFFLQ*SKLKTG
Trigger: ACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTG...ACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CAA 90 bp ACTGGTAATTTTCCTGTGGGTGTTTCCAGGCATGGCAGTATAGCATTTCCCATCCTCCTTCAGTTTTTCTaGCAGTTGAGCAAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: TGNFPVGVSRHGSIAFPILLQFF*QLSKLK
Trigger: TTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAG...GATGGGAAATGCTATACTGCCATGCCTGGAAACACCCACAGGAAAATTACCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CAA 90 bp CATGATATCCATGATAGTGGCCTGATAGCTATGACACTTGAACACAGTGAAGAATTTGGTGGTTTCCTCTaGCTCAGGGTAGCTATCTGC +
Preference number: 5 (lower is better)
Translates to: HDIHDSGLIAMTLEHSEEFGGFL*LRVAIC
Trigger: GCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAA...TTCTTCACTGTGTTCAAGTGTCATAGCTATCAGGCCACTATCATGGATATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp CACATACCTCATGATGTAATTCATGGGTGCTATCTTGTCTCAAGAAGACACACGAAGGTACTTCTGGGCTaGGCAGTTCTGTTAAGCAGA +
Preference number: 5 (lower is better)
Translates to: HIPHDVIHGCYLVSRRHTKVLLG*AVLLSR
Trigger: TCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTT...CGTGTGTCTTCTTGAGACAAGATAGCACCCATGAATTACATCATGAGGTATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CAA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCAAGCCCTCTTATAGGGTaGCAGCCTCCTCATGGCAGG +
Preference number: 5 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSSPLIG*QPPHGR
Trigger: CCTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCT...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CAA 90 bp AAGGAGCTGACCCAAGATTCCACAGCTAGAAAATGCAGGGACAGATTATGGCTCAACTTCCCTCTTGAGTaGGCACTTTGTATACAAGAT +
Preference number: 5 (lower is better)
Translates to: KELTQDSTARKCRDRLWLNFPLE*ALCIQD
Trigger: ATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTT...GAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGAATCTTGGGTCAGCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS TCA 90 bp AGGGTAATCCACCAAGATTGTTTCTTGCCTACGCTTGATACAGTCTaGAAGGTCATAAATTGGGTAAGTCTCTTCAGGGTAACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RVIHQDCFLPTLDTV*KVINWVSLFRVTFR
Trigger: CCTGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335425.7
CDS-3UTR CAA 90 bp TTCTGTCTCCTTCAGTTTTTCTTGCAGTTGAGCAAGCTCAAAACTGGTAATTTTCTGATCCTTTGGCCTTaGCAAATGCCTCGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: FCLLQFFLQLSKLKTGNFLILWP*QMPRQG
Trigger: ACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAG...AAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CAA 90 bp TATTTCTTCAGCAGAAAGTTCTTTTGGGTCAGGGTAATCCACCAAGATTGTTTCTCCCATCCTCTGCAGTaGTTTTCCCCTTTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: YFFSRKFFWVRVIHQDCFSHPLQ*FSPLRA
Trigger: AGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGA...GAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CAA 90 bp AAAACCAGGAGTGCAAAGGTACTTCTGGGCTTGGCAGTTCTGTTAAGCAGAACATTAGGTCCCACTCTGTaGATTAATTTTTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: KTRSAKVLLGLAVLLSRTLGPTL*INFSMA
Trigger: AGCCATGGAAAAATTAATCAACAGAGTGGGACCTAA...TGTTCTGCTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CAA 90 bp GTTCATTTTATCTGTCAGGCTCTCTCTCGTCACACTGAGTTTTCTGAGGGTAGACTGAAAGGTCATAAATaGGGTAAGTCTCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: VHFICQALSRHTEFSEGRLKGHK*GKSLQG
Trigger: ACCCTGAAGAGACTTACCCAATTTATGACCTTTCAG...TCTACCCTCAGAAAACTCAGTGTGACGAGAGAGAGCCTGACAGATAAAATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp CATAGGTGGAAATCGGCCCAATTTTCCTTAACCGTCAAATCCAATGGCTTTTTGGTTTCTTGCCTACGCTaGATACAGTCTGAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: HRWKSAQFSLTVKSNGFLVSCLR*IQSERS
Trigger: TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAAC...CAAAAAGCCATTGGATTTGACGGTTAAGGAAAATTGGGCCGATTTCCACCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CAA 90 bp ACTGGGAATGTCTTTGGGAATGTGCCCTCTTCGAACTCTCAGGTCTTACATGTATTCATCTTTAAAGTCTaGGGACCACTCTTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: TGNVFGNVPSSNSQVLHVFIFKV*GPLFFG
Trigger: ACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAA...TACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CAA 90 bp GCAGTTCTGTTAAGCAGAACAGGGGTAAAGGAAGCTAGATATCCAGGTAGTATCTCCCAGATTATGCAGTaGTTTTGTGAGCTAACTGTC +
Preference number: 5 (lower is better)
Translates to: AVLLSRTGVKEARYPGSISQIMQ*FCELTV
Trigger: GACAGTTAGCTCACAAAACAACTGCATAATCTGGGA...GATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTGCTTAACAGAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp CATGATATCCATGATAGTGGCCTGATAGCTATGACACTTGAACACAGTGAAGAATGTCTCAGGGCTTGCTaGGACCCTAACCCATTTAAA +
Preference number: 5 (lower is better)
Translates to: HDIHDSGLIAMTLEHSEECLRAC*DPNPFK
Trigger: TTTAAATGGGTTAGGGTCCAAGCAAGCCCTGAGACA...TTCTTCACTGTGTTCAAGTGTCATAGCTATCAGGCCACTATCATGGATATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp CATGATATCCATGATAGTGGCCTGATAGCTATGACACTTGAACACAGTGAAGAAAAAAGACCCAACCACTaGATGTCTCAGGGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: HDIHDSGLIAMTLEHSEEKRPNH*MSQGLL
Trigger: AAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTTT...TTCTTCACTGTGTTCAAGTGTCATAGCTATCAGGCCACTATCATGGATATCATG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp CATAGGTGGAAATCGGCCCAATTTTCCTTAACCGTCAAATCCAATGGCTTTTTGCTGAAAGGTCATAAATaGGGTAAGTCTCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: HRWKSAQFSLTVKSNGFLLKGHK*GKSLQG
Trigger: ACCCTGAAGAGACTTACCCAATTTATGACCTTTCAG...CAAAAAGCCATTGGATTTGACGGTTAAGGAAAATTGGGCCGATTTCCACCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CAA 90 bp GCAGTTCTGTTAAGCAGAACAGGGGTAAAGGAAGCTAGATATCCAGGTAGTATCTTCATCTTTAAAGTCTaGGGACCACTCTTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: AVLLSRTGVKEARYPGSIFIFKV*GPLFFG
Trigger: ACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAA...GATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTGCTTAACAGAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS-3UTR CAA 90 bp TCCAACTTCCCTCTTGAGTTGGCACTTTGTATACAAGATCAGTCCTCATTTGTTACCGGACCCATGATTTaGTCATCCTGGGTTGTATAT +
Preference number: 5 (lower is better)
Translates to: SNFPLELALCIQDQSSFVTGPMI*SSWVVY
Trigger: ATATACAACCCAGGATGACAAAATCATGGGTCCGGT...AACAAATGAGGACTGATCTTGTATACAAAGTGCCAACTCAAGAGGGAAGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp GCAGTTCTGTTAAGCAGAACAGGGGTAAAGGAAGCTAGATATCCAGGTAGTATCTGTGCAATGACAAACTaGGTATTTTCCCATGTTGAC +
Preference number: 5 (lower is better)
Translates to: AVLLSRTGVKEARYPGSICAMTN*VFSHVD
Trigger: GTCAACATGGGAAAATACCAAGTTTGTCATTGCACA...GATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTGCTTAACAGAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp TTATCGGTGCTGATGCCCAACCCTTCATCTTTAAAGTCTTGGGACCACTCTTCTAAATCCAATGGCTTTTaGTCAGTTCTCACTCTTAGT +
Preference number: 5 (lower is better)
Translates to: LSVLMPNPSSLKSWDHSSKSNGF*SVLTLS
Trigger: ACTAAGAGTGAGAACTGACAAAAAGCCATTGGATTT...AGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS TCA 90 bp TTCAGGCGGCACATGTTACTTTTCCAGACTGTACGCAGGGCATTCTaGTCTTCAATGAATGAAACAGTCTTAATTCTGTTTCCTAAGTCA +
Preference number: 5 (lower is better)
Translates to: FRRHMLLFQTVRRAF*SSMNETVLILFPKS
Trigger: TGACTTAGGAAACAGAATTAAGACTGTTTCATTCATTGAAGATCAGAATGCCCTGCGTACAGTCTGGAAAAGTAACATGTGCCGCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530060.5
CDS-3UTR CAA 90 bp CATGATATCCATGATAGTGGCCTGATAGCTATGACACTTGAACACAGTGAAGAACTCCTTCAGTTTTTCTaGCAGTTGAGCAAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: HDIHDSGLIAMTLEHSEELLQFF*QLSKLK
Trigger: TTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAG...TTCTTCACTGTGTTCAAGTGTCATAGCTATCAGGCCACTATCATGGATATCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000343202.8
CDS-3UTR CAA 90 bp TTCTGTCTCCTTCAGTTTTTCTTGCAGTTGAGCAAGCTCAAAACTGGTAATTTTCAGCAGAAAGTTCTTTaGGGTCAGGGTAATCCACCA +
Preference number: 5 (lower is better)
Translates to: FCLLQFFLQLSKLKTGNFQQKVL*GQGNPP
Trigger: TGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTG...AAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528463.5
CDS-3UTR CAA 90 bp TGTTTGAATTTGGACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTGCATTCTGGGCACTGCTATATaGGTTCTCTGCAACAGACAT +
Preference number: 5 (lower is better)
Translates to: CLNLDLKLFDHPSHIRCILGTAI*VLCNRH
Trigger: ATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAG...AATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS TCA 90 bp AGGGTAATCCACCAAGATTGTTTCTTGCCTACGCTTGATACAGTCTaGAAGGTCATAAATTGGGTAAGTCTCTTCAGGGTAACTAATTTT +
Preference number: 5 (lower is better)
Translates to: RVIHQDCFLPTLDTV*KVINWVSLFRVTNF
Trigger: AAAATTAGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425599.6
CDS-3UTR CAA 90 bp TGTTTGAATTTGGACCTTAAGTTATTTGATCACCCAAGCCATATAAGGTGCATTGTTTCTTGCCTACGCTaGATACAGTCTGAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: CLNLDLKLFDHPSHIRCIVSCLR*IQSERS
Trigger: TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAAC...AATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309737.11
ENST00000335425.7
CDS-3UTR CAA 90 bp AAGAGCACCTGTTATTTTTCACCTTTCGTGTACAATACATCTAGATTGCATTCAGCAGAATTCACAATCTaGAGCCCTCTTATAGGGTTG +
Preference number: 5 (lower is better)
Translates to: KSTCYFSPFVYNTSRLHSAEFTI*SPLIGL
Trigger: CAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGC...TGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
CDS-3UTR CAA 90 bp ATTATTTGGCCTTACAATGGCTATTTGGAAATCACTGTGCCAATCCCAATAATAAGTCCTAGTTCTGCCTaGTTAGTTGTGAATTTTGGG +
Preference number: 5 (lower is better)
Translates to: IIWPYNGYLEITVPIPIISPSSA*LVVNFG
Trigger: CCCAAAATTCACAACTAACAAGGCAGAACTAGGACT...TATTATTGGGATTGGCACAGTGATTTCCAAATAGCCATTGTAAGGCCAAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS-3UTR CAA 90 bp TTGAATTGTATCACTCACTGGATTAAGAACCAAAAGATCCATGTTCAAGTCCTAAAGTGGTGTCATTATTaGGCCTTACAATGGCTATTT +
Preference number: 5 (lower is better)
Translates to: LNCITHWIKNQKIHVQVLKWCHY*ALQWLF
Trigger: AAATAGCCATTGTAAGGCCAAATAATGACACCACTT...TAGGACTTGAACATGGATCTTTTGGTTCTTAATCCAGTGAGTGATACAATTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419822.2
CDS GCA 72 bp CGGCCCAATTTTCCTTCAGGTGTCGGCGGCGGCTCCTaGCGCTTCCCGCGGGACAGGAAGGCCTTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: RPNFPSGVGGGS*RFPRDRKALGS
Trigger: GCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGACACCTGAAGGAAAATTGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309737.11
ENST00000343202.8
ENST00000419822.2
ENST00000425599.6
ENST00000531450.1
CDS GCA 72 bp CACAGTCTGTGCTCTTCAGGTGTCGGCGGCGGCTCCTaGCGCTTCCCGCGGGACAGGAAGGCCTTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: HSLCSSGVGGGS*RFPRDRKALGS
Trigger: GCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGACACCTGAAGAGCACAGACTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526962.1
CDS GCA 72 bp GTGGAGTACGCCATGACTGCTCACGGTGGTCGCAGGTaGAGACGCCAGCCGGAACCGGAACCGGAACCGGAG +
Preference number: 6 (lower is better)
Translates to: VEYAMTAHGGRR*RRQPEPEPEPE
Trigger: CTCCGGTTCCGGTTCCGGTTCCGGCTGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCAC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343202.8
CDS GCA 72 bp CAGAGCGACTCTCTGCACTGTGGAGTACGCCATGACTaGTCACGGTGGTCGCAGGTGCAGACGCCAGCCGGA +
Preference number: 6 (lower is better)
Translates to: QSDSLHCGVRHD*SRWSQVQTPAG
Trigger: TCCGGCTGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335425.7
ENST00000343202.8
ENST00000526962.1
CDS TCA 72 bp AAGCCAGAGCGACTCTCTGCACTGTGGAGTACGCCATaGCTGCTCACGGTGGTCGCAGGTGCAGACGCCAGC +
Preference number: 6 (lower is better)
Translates to: KPERLSALWSTP*LLTVVAGADAS
Trigger: GCTGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000419822.2
ENST00000526962.1
CDS GCA 72 bp AGAGCCAGGACAAGCCCAGAAGCCAGAGCGACTCTCTaGACTGTGGAGTACGCCATGACTGCTCACGGTGGT +
Preference number: 6 (lower is better)
Translates to: RARTSPEARATL*TVEYAMTAHGG
Trigger: ACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGGCTTGTCCTGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309737.11
ENST00000335425.7
ENST00000343202.8
ENST00000419822.2
ENST00000526962.1
ENST00000528463.5
ENST00000531450.1