RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIBC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000128408

Ensembl transcript IDs: ENST00000466226.1, ENST00000614167.2, ENST00000621287.1

Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTACTCTTTATACGTGAATaGCGGGAACAAGGGTGTGTT +
Preference number: 2 (lower is better)
Translates to: HSGRLQLKGTCGPRSVSLLFIRE*REQGCV
Trigger: AACACACCCTTGTTCCCGTCATTCACGTATAAAGAG...TAAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
3UTR-3UTR TCA 90 bp TTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCGCCACTCTTTATACGTaGATGACGGGAACAAGGGTG +
Preference number: 2 (lower is better)
Translates to: LDKCFVHSGRLQLKGTCGATLYT*MTGTRV
Trigger: CACCCTTGTTCCCGTCATTCACGTATAAAGAGTGGC...GCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp AAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGGTGGCGCGAGCCCCCTaGATCCTCCGCCGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KCFVHSGRLQLKGTCGPRVARAP*ILRRSQ
Trigger: CTGGGACCGGCGGAGGATTCAGGGGGCTCGCGCCAC...CCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp GTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTCAGGGACCACGCGGTaGGGCCCGAAGGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VHSGRLQLKGTCGPRSVSSGTTR*GPKELA
Trigger: AGCCAGCTCCTTCGGGCCCCACCGCGTGGTCCCTGA...AGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp CCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTCCTGCCGCAAGTCCCTaGGCAGCGCCACCGCCATGG +
Preference number: 4 (lower is better)
Translates to: PQWTITAEGYLWPKECIFPAASP*AAPPPW
Trigger: CCATGGCGGTGGCGCTGCCCAGGGACTTGCGGCAGG...AAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp GTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTGAGCTGGCTGCCTGCTaGGGGTTCTCGGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VHSGRLQLKGTCGPRSVSELAAC*GFSESR
Trigger: CCTGCTCTCCGAGAACCCGCAGCAGGCAGCCAGCTC...AGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp CCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTGCCAGGTTGGCGTCCTaGCGCAAGTCCCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PQWTITAEGYLWPKECIFARLAS*RKSLGS
Trigger: GCTGCCCAGGGACTTGCGGCAGGACGCCAACCTGGC...AAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp AAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGCCGTCGGGCTCCCAGTaGCGCCGCAGAGGTACAGAC +
Preference number: 4 (lower is better)
Translates to: KCFVHSGRLQLKGTCGPRPSGSQ*RRRGTD
Trigger: GTCTGTACCTCTGCGGCGTCACTGGGAGCCCGACGG...CCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp CCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTCCCGAAGGAGCTGGCTaGCTGCTGCGGGTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: PQWTITAEGYLWPKECIFPEGAG*LLRVLG
Trigger: TCCGAGAACCCGCAGCAGGCAGCCAGCTCCTTCGGG...AAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp TGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTTGCCGCCGCCACTGCTaGCGCTCAAACAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CFVHSGRLQLKGTCGPRSCRRHC*RSNSRV
Trigger: CACCCTGCTGTTTGAGCGGCAGCAGTGGCGGCGGCA...ACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp AAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGCGCTGCCGCCGCCACTaGTGCCGCTCAAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: KCFVHSGRLQLKGTCGPRRCRRH*CRSNSR
Trigger: CCTGCTGTTTGAGCGGCAGCAGTGGCGGCGGCAGCG...CCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp TGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTCGCGTGCCTCCTCTTTaGCAGGTTGGCGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: CFVHSGRLQLKGTCGPRSRVPPL*QVGVLP
Trigger: CGGCAGGACGCCAACCTGGCAAAGAGGAGGCACGCG...ACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp CCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTGCTCCTTGGCCAGGCTaGGGTTGCTGCTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PQWTITAEGYLWPKECIFAPWPG*GCCCPE
Trigger: CTCTGGACAGCAGCAACCTCAGCCTGGCCAAGGAGC...AAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp TGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGCTCAAACAGCAGGGTaGCGCGAGCCCCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: CFVHSGRLQLKGTCGPRSAQTAG*REPPES
Trigger: GGATTCAGGGGGCTCGCGCCACCCTGCTGTTTGAGC...ACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp CACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTAAAGGAGCTGGCTGCCTaGTGCGGGTTCTCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: HSGRLQLKGTCGPRSVSLKELAA*CGFSES
Trigger: GCTCTCCGAGAACCCGCAGCAGGCAGCCAGCTCCTT...TAAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp CCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTCGGATCTGCTCCAGCTaGTCCTGGGTCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PQWTITAEGYLWPKECIFRICSS*SWVMPF
Trigger: GAAGGGCATGACCCAGGAGCAGCTGGAGCAGATCCG...AAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp ATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGCTGCACAGCTCCGCGTaGCTCCTCTTTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: MFCPQWTITAEGYLWPKELHSSA*LLFARL
Trigger: CAACCTGGCAAAGAGGAGGCACGCGGAGCTGTGCAG...CTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp TGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTCACGCAGGAGGTTGGTaGTCTCGGCCAAGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: CFVHSGRLQLKGTCGPRSHAGGW*SRPSCP
Trigger: AGGACAACTTGGCCGAGATCACCAACCTCCTGCGTG...ACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp ATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTCCTGTTTCTGGCGTTaGAGACCCGCTTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: MFCPQWTITAEGYLWPKESCFWR*RPASAC
Trigger: GCAGGCAGAAGCGGGTCTTCAACGCCAGAAACAGGA...CTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp AAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGTGGACTAGGCGGATCTaGTCCAGCTGCTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KCFVHSGRLQLKGTCGPRWTRRI*SSCSWV
Trigger: GACCCAGGAGCAGCTGGAGCAGATCCGCCTAGTCCA...CCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp AAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGTTGAAGACCCGCTTCTaGCTGCACAGCTCCGCGTGC +
Preference number: 4 (lower is better)
Translates to: KCFVHSGRLQLKGTCGPRLKTRF*LHSSAC
Trigger: GCACGCGGAGCTGTGCAGGCAGAAGCGGGTCTTCAA...CCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp CACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTAGCAGCGCCACCGCCATaGTCTGGGAACCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: HSGRLQLKGTCGPRSVSLAAPPP*SGNPWK
Trigger: TTTCCATGGGTTCCCAGACCATGGCGGTGGCGCTGC...TAAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp CACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTATCCTCTTTGCCAGGTTaGCGTCCTGCCGCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: HSGRLQLKGTCGPRSVSLSSLPG*RPAASP
Trigger: GGGACTTGCGGCAGGACGCCAACCTGGCAAAGAGGA...TAAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp AGGTTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTTGCTGTCCAGAGCTCTaGGCAGGTCGCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: RLDKCFVHSGRLQLKGTCCCPEL*AGRAAA
Trigger: GGCGGCAGCGCGACCTGCGCAGAGCTCTGGACAGCA...ACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp AGGTTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGGGCCCGAAGGAGCTaGCTGCCTGCTGCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: RLDKCFVHSGRLQLKGTCGARRS*LPAAGS
Trigger: AGAACCCGCAGCAGGCAGCCAGCTCCTTCGGGCCCC...ACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp GTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTGGATTTGCTGCTTCTaGACTAGGCGGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VHSGRLQLKGTCGPRSVSWICCF*TRRICS
Trigger: GGAGCAGATCCGCCTAGTCCAGAAGCAGCAAATCCA...AGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp CCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTTGGCGCTTTTCTTCCTaGAGCCTCAGCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PQWTITAEGYLWPKECIFWRFSS*SLSFSW
Trigger: CCAGGAGAAGCTGAGGCTCCAGGAAGAAAAGCGCCA...AAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp TGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTCTGCCTTTCTGGTGGTaGTTTCCAGCTTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: CFVHSGRLQLKGTCGPRSLPFWW*FPASGG
Trigger: ACCTCCAGAAGCTGGAAAGCACCACCAGAAAGGCAG...ACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp ATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGGCTTCTGGAGGTGCTTaGCTGTCTCGTCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: MFCPQWTITAEGYLWPKEASGGA*LSRQTA
Trigger: TGCAGTTTGACGAGACAGCCAAGCACCTCCAGAAGC...CTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp CCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTTGGCCTGGCTCTTGTTaGAGTCTTTCACAGATGCAC +
Preference number: 4 (lower is better)
Translates to: PQWTITAEGYLWPKECIFWPGSC*SLSQMH
Trigger: GTGCATCTGTGAAAGACTTCAACAAGAGCCAGGCCA...AAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp GTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTCGAGTTTCTGGCTTCTaGAAGCTCTGTTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: VHSGRLQLKGTCGPRSVSRVSGF*KLCWKS
Trigger: TGACTTCCAACAGAGCTTTCAGAAGCCAGAAACTCG...AGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp ATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTGTAGAGGGCCTCTaGGCATTTTTGTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: MFCPQWTITAEGYLWPKECVEGL*AFLFST
Trigger: CGTGCTGAACAAAAATGCGCAGAGGCCCTCTACACA...CTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp GTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTACTGACTCGATGGCCTaGCTCTTGTTGAAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: VHSGRLQLKGTCGPRSVSTDSMA*LLLKSF
Trigger: GAAAGACTTCAACAAGAGCCAGGCCATCGAGTCAGT...AGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp AAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGCTTTTTCCTTTCCACTaGCTCGATGGCCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: KCFVHSGRLQLKGTCGPRLFPFH*LDGLAL
Trigger: AAGAGCCAGGCCATCGAGTCAGTGGAAAGGAAAAAG...CCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp AAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGGCCACTCTTTATACGTaGATGACGGGAACAAGGGTG +
Preference number: 4 (lower is better)
Translates to: KCFVHSGRLQLKGTCGPRATLYT*MTGTRV
Trigger: CACCCTTGTTCCCGTCATTCACGTATAAAGAGTGGC...CCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp TTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCGCCACCGCCATGGTCTaGGAACCCATGGAAAGCCTA +
Preference number: 4 (lower is better)
Translates to: LDKCFVHSGRLQLKGTCGATAMV*EPMESL
Trigger: TAGGCTTTCCATGGGTTCCCAGACCATGGCGGTGGC...GCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp ATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGGCTGAAGGGTACTTGTaGCCCAAGGAGTGTATCTTT +
Preference number: 4 (lower is better)
Translates to: MFCPQWTITAEGYLWPKEAEGYL*PKECIF
Trigger: AAAGATACACTCCTTGGGCCACAAGTACCCTTCAGC...CTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp GTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTATGTTTTGTCCACAGTaGACGATTACAGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: VHSGRLQLKGTCGPRSVSMFCPQ*TITAEG
Trigger: CCCTTCAGCTGTAATCGTCCACTGTGGACAAAACAT...AGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp CACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTACACAGATGCACAAACTaGCTTTCTGGTGGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: HSGRLQLKGTCGPRSVSLHRCTN*LSGGAF
Trigger: GAAAGCACCACCAGAAAGGCAGTTTGTGCATCTGTG...TAAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp TTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCGAACATCATTATCTaGCTGCCGGGCTGGAAGATC +
Preference number: 4 (lower is better)
Translates to: LDKCFVHSGRLQLKGTCGPNIII*LPGWKI
Trigger: GATCTTCCAGCCCGGCAGTCAGATAATGATGTTCGG...GCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp TTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCGTGGACGATTACAGCTaGAGGGTACTTGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LDKCFVHSGRLQLKGTCGVDDYS*RVLVAQ
Trigger: TTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCAC...GCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp TGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTTTCTTCCATTCCCTTTaGTGCTGCAAAGACCATTCT +
Preference number: 4 (lower is better)
Translates to: CFVHSGRLQLKGTCGPRSFFHSL*CCKDHS
Trigger: AGAATGGTCTTTGCAGCAGCAAAGGGAATGGAAGAA...ACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp AGGTTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGTGCTTTCCAGCTTCTaGAGGTGCTTGGCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: RLDKCFVHSGRLQLKGTCVLSSF*RCLAVS
Trigger: CGAGACAGCCAAGCACCTCCAGAAGCTGGAAAGCAC...ACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp ATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGGAATTTCTGCATTCCTaGTATCGTATTCCGAACATC +
Preference number: 4 (lower is better)
Translates to: MFCPQWTITAEGYLWPKEEFLHS*YRIPNI
Trigger: GATGTTCGGAATACGATATCAGGAATGCAGAAATTC...CTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp AAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGGAAGTCTTTCACAGATaGACAAACTGCCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: KCFVHSGRLQLKGTCGPREVFHR*TNCLSG
Trigger: ACCAGAAAGGCAGTTTGTGCATCTGTGAAAGACTTC...CCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp TTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCAGCCTCAGCTTCTCCTaGATTTGCTGCTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: LDKCFVHSGRLQLKGTCGSLSFS*ICCFWT
Trigger: AGTCCAGAAGCAGCAAATCCAGGAGAAGCTGAGGCT...GCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp AGGTTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTTTCTCCTGGATTTGCTaGTTCTGGACTAGGCGGATC +
Preference number: 4 (lower is better)
Translates to: RLDKCFVHSGRLQLKGTCFSWIC*FWTRRI
Trigger: GATCCGCCTAGTCCAGAAGCAGCAAATCCAGGAGAA...ACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp ATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTCTCCCATGAATTTCTaGATTCCTGATATCGTATTC +
Preference number: 4 (lower is better)
Translates to: MFCPQWTITAEGYLWPKESPMNF*IPDIVF
Trigger: GAATACGATATCAGGAATGCAGAAATTCATGGGAGA...CTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CCA 90 bp TTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCAAACTGCCTTTCTGGTaGTGCTTTCCAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LDKCFVHSGRLQLKGTCGKLPFW*CFPASG
Trigger: TCCAGAAGCTGGAAAGCACCACCAGAAAGGCAGTTT...GCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp TTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCTTCCATTCCCTTTGCTaGTGCAAAGACCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: LDKCFVHSGRLQLKGTCGFHSLC*CKDHSL
Trigger: CAGAGAATGGTCTTTGCAGCAGCAAAGGGAATGGAA...GCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp AGGTTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTCTCTTTATACGTGAATaGCGGGAACAAGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: RLDKCFVHSGRLQLKGTCLFIRE*REQGCV
Trigger: AACACACCCTTGTTCCCGTCATTCACGTATAAAGAG...ACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR GCA 90 bp AGGTTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTACATCATTATCTGACTaGCGGGCTGGAAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: RLDKCFVHSGRLQLKGTCTSLSD*RAGRSF
Trigger: GAAAGATCTTCCAGCCCGGCAGTCAGATAATGATGT...ACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR TCA 90 bp AGGTTAGATAAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTTTAAATCCTCTCCCATaGATTTCTGCATTCCTGATA +
Preference number: 4 (lower is better)
Translates to: RLDKCFVHSGRLQLKGTCLNPLP*ISAFLI
Trigger: TATCAGGAATGCAGAAATTCATGGGAGAGGATTTAA...ACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTTATCTAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS GCA 90 bp CAGCGGTCAGGGACCACGCGGTGGGGCCCGAAGGAGCTGGCTGCCTaGTGCGGGTTCTCGGAGAGCAGGTCCCCACGCAGGAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: QRSGTTRWGPKELAA*CGFSESRSPRRRLV
Trigger: CACCAACCTCCTGCGTGGGGACCTGCTCTCCGAGAACCCGCAGCAGGCAGCCAGCTCCTTCGGGCCCCACCGCGTGGTCCCTGACCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS GCA 90 bp GCCAGGCTGAGGTTGCTGCTGTCCAGAGCTCTGCGCAGGTCGCGCTaGCGCCGCCACTGCTGCCGCTCAAACAGCAGGGTGGCGCGAGCC +
Preference number: 5 (lower is better)
Translates to: ARLRLLLSRALRRSR*RRHCCRSNSRVARA
Trigger: GGCTCGCGCCACCCTGCTGTTTGAGCGGCAGCAGTGGCGGCGGCAGCGCGACCTGCGCAGAGCTCTGGACAGCAGCAACCTCAGCCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS GCA 90 bp CTTCCAGCGGTCAGGGACCACGCGGTGGGGCCCGAAGGAGCTGGCTaGCTGCTGCGGGTTCTCGGAGAGCAGGTCCCCACGCAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: LPAVRDHAVGPEGAG*LLRVLGEQVPTQEV
Trigger: AACCTCCTGCGTGGGGACCTGCTCTCCGAGAACCCGCAGCAGGCAGCCAGCTCCTTCGGGCCCCACCGCGTGGTCCCTGACCGCTGGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS TCA 90 bp CGCCGCCACTGCTGCCGCTCAAACAGCAGGGTGGCGCGAGCCCCCTaGATCCTCCGCCGGTCCCAGTCCAGGTCTCGCTGGCGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: RRHCCRSNSRVARAP*ILRRSQSRSRWRFS
Trigger: AGAAAAGCGCCAGCGAGACCTGGACTGGGACCGGCGGAGGATTCAGGGGGCTCGCGCCACCCTGCTGTTTGAGCGGCAGCAGTGGCGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS GCA 90 bp TGCCTGCACAGCTCCGCGTGCCTCCTCTTTGCCAGGTTGGCGTCCTaGCGCAAGTCCCTGGGCAGCGCCACCGCCATGGTCTGGGAACCC +
Preference number: 5 (lower is better)
Translates to: CLHSSACLLFARLAS*RKSLGSATAMVWEP
Trigger: GGGTTCCCAGACCATGGCGGTGGCGCTGCCCAGGGACTTGCGGCAGGACGCCAACCTGGCAAAGAGGAGGCACGCGGAGCTGTGCAGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS GCA 90 bp GCTGCTTCTGGACTAGGCGGATCTGCTCCAGCTGCTCCTGGGTCATaGCCTTCCAGCGGTCAGGGACCACGCGGTGGGGCCCGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: AASGLGGSAPAAPGS*PSSGQGPRGGARRS
Trigger: GCTCCTTCGGGCCCCACCGCGTGGTCCCTGACCGCTGGAAGGGCATGACCCAGGAGCAGCTGGAGCAGATCCGCCTAGTCCAGAAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS GCA 90 bp GTTGAAGACCCGCTTCTGCCTGCACAGCTCCGCGTGCCTCCTCTTTaGCAGGTTGGCGTCCTGCCGCAAGTCCCTGGGCAGCGCCACCGC +
Preference number: 5 (lower is better)
Translates to: VEDPLLPAQLRVPPL*QVGVLPQVPGQRHR
Trigger: GCGGTGGCGCTGCCCAGGGACTTGCGGCAGGACGCCAACCTGGCAAAGAGGAGGCACGCGGAGCTGTGCAGGCAGAAGCGGGTCTTCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS GCA 90 bp CTGTTTCTGGCGTTGAAGACCCGCTTCTGCCTGCACAGCTCCGCGTaGCTCCTCTTTGCCAGGTTGGCGTCCTGCCGCAAGTCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LFLALKTRFCLHSSA*LLFARLASCRKSLG
Trigger: GCCCAGGGACTTGCGGCAGGACGCCAACCTGGCAAAGAGGAGGCACGCGGAGCTGTGCAGGCAGAAGCGGGTCTTCAACGCCAGAAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS GCA 90 bp TTCTCCTGGATTTGCTGCTTCTGGACTAGGCGGATCTGCTCCAGCTaGTCCTGGGTCATGCCCTTCCAGCGGTCAGGGACCACGCGGTGG +
Preference number: 5 (lower is better)
Translates to: FSWICCFWTRRICSS*SWVMPFQRSGTTRW
Trigger: CCACCGCGTGGTCCCTGACCGCTGGAAGGGCATGACCCAGGAGCAGCTGGAGCAGATCCGCCTAGTCCAGAAGCAGCAAATCCAGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS TCA 90 bp CGCCGGCATCCAACTGGGACCCCGACACGGAAAGTGTTTTCCACATaGCTGAGGTGTCATTGCAGGTGTTTCCCTCCTGGAGGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: RRHPTGTPTRKVFST*LRCHCRCFPPGGQA
Trigger: AGCCTGCCCTCCAGGAGGGAAACACCTGCAATGACACCTCAGTCATGTGGAAAACACTTTCCGTGTCGGGGTCCCAGTTGGATGCCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466226.1
CDS TCA 90 bp CATCCCAGGCTTCAGTGTCTCCCCCAATTATCCTGTTTCTGGCGTTaGAGACCCGCTTCTGCCTGCACAGCTCCGCGTGCCTCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: HPRLQCLPQLSCFWR*RPASACTAPRASSL
Trigger: CAAAGAGGAGGCACGCGGAGCTGTGCAGGCAGAAGCGGGTCTTCAACGCCAGAAACAGGATAATTGGGGGAGACACTGAAGCCTGGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS CCA 90 bp CGCTTTTCTTCCTGGAGCCTCAGCTTCTCCTGGATTTGCTGCTTCTaGACTAGGCGGATCTGCTCCAGCTGCTCCTGGGTCATGCCCTTC +
Preference number: 5 (lower is better)
Translates to: RFSSWSLSFSWICCF*TRRICSSCSWVMPF
Trigger: GAAGGGCATGACCCAGGAGCAGCTGGAGCAGATCCGCCTAGTCCAGAAGCAGCAAATCCAGGAGAAGCTGAGGCTCCAGGAAGAAAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS-3UTR CAA 90 bp TGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTCCGCGTGCCTCCTCTTaGCCAGGTTGGCGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: CFVHSGRLQLKGTCGPRSPRASS*PGWRPA
Trigger: GGCAGGACGCCAACCTGGCAAAGAGGAGGCACGCGG...ACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS TCA 90 bp CCTGCTGCGGGTTCTCGGAGAGCAGGTCCCCACGCAGGAGGTTGGTaGTCTCGGCCAAGTTGTCCTCTTGTTCTTGCTTTTTCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: PAAGSRRAGPHAGGW*SRPSCPLVLAFSLA
Trigger: AGCAAGAGAAAAAGCAAGAACAAGAGGACAACTTGGCCGAGATCACCAACCTCCTGCGTGGGGACCTGCTCTCCGAGAACCCGCAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS-3UTR CAA 90 bp GTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTCTCCTCTTTGCCAGGTaGGCGTCCTGCCGCAAGTCC +
Preference number: 5 (lower is better)
Translates to: VHSGRLQLKGTCGPRSVSLLFAR*ASCRKS
Trigger: GGACTTGCGGCAGGACGCCAACCTGGCAAAGAGGAG...AGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS CCA 90 bp CCTCCCCTCCAGTCGTCGAGCCCGAGGTCGCGGAGTACCTATACCTaGCTCTTGTTGAAGTCTTTCACAGATGCACAAACTGCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: PPLQSSSPRSRSTYT*LLLKSFTDAQTAFL
Trigger: CAGAAAGGCAGTTTGTGCATCTGTGAAAGACTTCAACAAGAGCCAGGTATAGGTACTCCGCGACCTCGGGCTCGACGACTGGAGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621287.1
CDS-3UTR CAA 90 bp GTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTCCCCACGCAGGAGGTaGGTGATCTCGGCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: VHSGRLQLKGTCGPRSVSSPRRR*VISAKL
Trigger: CAACTTGGCCGAGATCACCAACCTCCTGCGTGGGGA...AGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS CCA 90 bp CACAAACTGCCTTTCTGGTGGTGCTTTCCAGCTTCTGGAGGTGCTTaGCTGTCTCGTCAAACTGCAGCCTTGTCTCTGTGTAGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: HKLPFWWCFPASGGA*LSRQTAALSLCRGP
Trigger: AGGCCCTCTACACAGAGACAAGGCTGCAGTTTGACGAGACAGCCAAGCACCTCCAGAAGCTGGAAAGCACCACCAGAAAGGCAGTTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466226.1
ENST00000614167.2
ENST00000621287.1
CDS-3UTR CAA 90 bp ATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGCAAATGCTGCTCCTaGGCCAGGCTGAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: MFCPQWTITAEGYLWPKECKCCS*ARLRLL
Trigger: CAGCAACCTCAGCCTGGCCAAGGAGCAGCATTTGCA...CTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS TCA 90 bp AGTCGTCGAGCCCGAGGTCGCGGAGTACCTATACCTGGCTCTTGTTaGAGTCTTTCACAGATGCACAAACTGCCTTTCTGGTGGTGCTTT +
Preference number: 5 (lower is better)
Translates to: SRRARGRGVPIPGSC*SLSQMHKLPFWWCF
Trigger: AAAGCACCACCAGAAAGGCAGTTTGTGCATCTGTGAAAGACTTCAACAAGAGCCAGGTATAGGTACTCCGCGACCTCGGGCTCGACGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621287.1
CDS GCA 90 bp CTCGATGGCCTGGCTCTTGTTGAAGTCTTTCACAGATGCACAAACTaGCTTTCTGGTGGTGCTTTCCAGCTTCTGGAGGTGCTTGGCTGT +
Preference number: 5 (lower is better)
Translates to: LDGLALVEVFHRCTN*LSGGAFQLLEVLGC
Trigger: ACAGCCAAGCACCTCCAGAAGCTGGAAAGCACCACCAGAAAGGCAGTTTGTGCATCTGTGAAAGACTTCAACAAGAGCCAGGCCATCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS CCA 90 bp TTCACAGATGCACAAACTGCCTTTCTGGTGGTGCTTTCCAGCTTCTaGAGGTGCTTGGCTGTCTCGTCAAACTGCAGCCTTGTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: FTDAQTAFLVVLSSF*RCLAVSSNCSLVSV
Trigger: CACAGAGACAAGGCTGCAGTTTGACGAGACAGCCAAGCACCTCCAGAAGCTGGAAAGCACCACCAGAAAGGCAGTTTGTGCATCTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466226.1
ENST00000614167.2
ENST00000621287.1
CDS-3UTR CAA 90 bp ATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGCGTCAAACTGCAGCCTaGTCTCTGTGTAGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: MFCPQWTITAEGYLWPKERQTAA*SLCRGP
Trigger: AGGCCCTCTACACAGAGACAAGGCTGCAGTTTGACG...CTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CAA 90 bp CCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTGGCCTCTGCGCATTTTaGTTCAGCACGGGCGTTCTT +
Preference number: 5 (lower is better)
Translates to: PQWTITAEGYLWPKECIFGLCAF*FSTGVL
Trigger: AAGAACGCCCGTGCTGAACAAAAATGCGCAGAGGCC...AAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS GCA 90 bp GTCGCGGAGTACCTATACCTGGCTCTTGTTGAAGTCTTTCACAGATaGACAAACTGCCTTTCTGGTGGTGCTTTCCAGCTTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: VAEYLYLALVEVFHR*TNCLSGGAFQLLEV
Trigger: CACCTCCAGAAGCTGGAAAGCACCACCAGAAAGGCAGTTTGTGCATCTGTGAAAGACTTCAACAAGAGCCAGGTATAGGTACTCCGCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621287.1
CDS-3UTR CAA 90 bp CACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTAAGCTTCTGGAGGTGCTaGGCTGTCTCGTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: HSGRLQLKGTCGPRSVSLSFWRC*AVSSNC
Trigger: GCAGTTTGACGAGACAGCCAAGCACCTCCAGAAGCT...TAAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CAA 90 bp CACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTAATCCTGTTTCTGGCGTaGAAGACCCGCTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: HSGRLQLKGTCGPRSVSLILFLA*KTRFCL
Trigger: CAGGCAGAAGCGGGTCTTCAACGCCAGAAACAGGAT...TAAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CAA 90 bp CCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTACAGCTGAAGGGTACTaGTGGCCCAAGGAGTGTATC +
Preference number: 5 (lower is better)
Translates to: PQWTITAEGYLWPKECIFTAEGY*WPKECI
Trigger: GATACACTCCTTGGGCCACAAGTACCCTTCAGCTGT...AAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CAA 90 bp GTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTATGGCCTGGCTCTTGTaGAAGTCTTTCACAGATGCA +
Preference number: 5 (lower is better)
Translates to: VHSGRLQLKGTCGPRSVSMAWLL*KSFTDA
Trigger: TGCATCTGTGAAAGACTTCAACAAGAGCCAGGCCAT...AGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS GCA 90 bp TACCTATACCTGGCTCTTGTTGAAGTCTTTCACAGATGCACAAACTaGCTTTCTGGTGGTGCTTTCCAGCTTCTGGAGGTGCTTGGCTGT +
Preference number: 5 (lower is better)
Translates to: YLYLALVEVFHRCTN*LSGGAFQLLEVLGC
Trigger: ACAGCCAAGCACCTCCAGAAGCTGGAAAGCACCACCAGAAAGGCAGTTTGTGCATCTGTGAAAGACTTCAACAAGAGCCAGGTATAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621287.1
CDS CCA 90 bp GGGCAGGCTCTGACTTTTCTTTCCCCACAGGGCCAAAGTAGCATGTaGCTGTCTGTGCACATTGGTAGGACTTTAAACAAATCCCACAAA +
Preference number: 5 (lower is better)
Translates to: GQALTFLSPQGQSSM*LSVHIGRTLNKSHK
Trigger: TTTGTGGGATTTGTTTAAAGTCCTACCAATGTGCACAGACAGCCACATGCTACTTTGGCCCTGTGGGGAAAGAAAAGTCAGAGCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466226.1
CDS-3UTR CAA 90 bp TGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTCTTCTGGTCATGAACTaGAACATCCCAGGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: CFVHSGRLQLKGTCGPRSLLVMN*NIPGFS
Trigger: ACTGAAGCCTGGGATGTTCAAGTTCATGACCAGAAG...ACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CAA 90 bp CCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTGTTCTTCCATTCCCTTaGCTGCTGCAAAGACCATTC +
Preference number: 5 (lower is better)
Translates to: PQWTITAEGYLWPKECIFVLPFP*LLQRPF
Trigger: GAATGGTCTTTGCAGCAGCAAAGGGAATGGAAGAAC...AAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS TCA 90 bp GCTAGGGGGTCGGACAGATCAAATTCACGGCGAGTTTCTGGCTTCTaGAAGCTCTGTTGGAAGTCATTGATAGCCCTACAGAGATTTTTC +
Preference number: 5 (lower is better)
Translates to: ARGSDRSNSRRVSGF*KLCWKSLIALQRFF
Trigger: GAAAAATCTCTGTAGGGCTATCAATGACTTCCAACAGAGCTTTCAGAAGCCAGAAACTCGCCGTGAATTTGATCTGTCCGACCCCCTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000614167.2
ENST00000621287.1
CDS-3UTR CAA 90 bp CACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTATCGATGGCCTGGCTCTaGTTGAAGTCTTTCACAGAT +
Preference number: 5 (lower is better)
Translates to: HSGRLQLKGTCGPRSVSLSMAWL*LKSFTD
Trigger: ATCTGTGAAAGACTTCAACAAGAGCCAGGCCATCGA...TAAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CAA 90 bp TGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGGCCAAGTTGTCCTCTaGTTCTTGCTTTTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: CFVHSGRLQLKGTCGPRSGQVVL*FLLFLL
Trigger: CAAGAGAAAAAGCAAGAACAAGAGGACAACTTGGCC...ACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CAA 90 bp AAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGGTGATCTCGGCCAAGTaGTCCTCTTGTTCTTGCTTT +
Preference number: 5 (lower is better)
Translates to: KCFVHSGRLQLKGTCGPRVISAK*SSCSCF
Trigger: AAAGCAAGAACAAGAGGACAACTTGGCCGAGATCAC...CCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS GCA 90 bp AATTTCTGCATTCCTGATATCGTATTCCGAACATCATTATCTGACTaGCGGGCTGGAAGATCTTTCTTAAGGGCTAGGGGGTCGGACAGA +
Preference number: 5 (lower is better)
Translates to: NFCIPDIVFRTSLSD*RAGRSFLRARGSDR
Trigger: TCTGTCCGACCCCCTAGCCCTTAAGAAAGATCTTCCAGCCCGGCAGTCAGATAATGATGTTCGGAATACGATATCAGGAATGCAGAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614167.2
ENST00000621287.1
CDS-3UTR CAA 90 bp ATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGCTCTGTTGGAAGTCATaGATAGCCCTACAGAGATTT +
Preference number: 5 (lower is better)
Translates to: MFCPQWTITAEGYLWPKELCWKS*IALQRF
Trigger: AAATCTCTGTAGGGCTATCAATGACTTCCAACAGAG...CTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CAA 90 bp AAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGCTTCTGAAAGCTCTGTaGGAAGTCATTGATAGCCCT +
Preference number: 5 (lower is better)
Translates to: KCFVHSGRLQLKGTCGPRLLKAL*EVIDSP
Trigger: AGGGCTATCAATGACTTCCAACAGAGCTTTCAGAAG...CCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CAA 90 bp CCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGTGTATCTTTCTCCCGTGGGTTGATTaGTATAGACTTCATTCATAT +
Preference number: 5 (lower is better)
Translates to: PQWTITAEGYLWPKECIFLPWVD*YRLHSY
Trigger: ATATGAATGAAGTCTATACAAATCAACCCACGGGAG...AAAGATACACTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CAA 90 bp ATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGAGATAGTCTCCCGTGGGTaGATTTGTATAGACTTCATT +
Preference number: 5 (lower is better)
Translates to: MFCPQWTITAEGYLWPKEIVSRG*ICIDFI
Trigger: AATGAAGTCTATACAAATCAACCCACGGGAGACTAT...CTCCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CAA 90 bp AAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGGTTGTCCTCTTGTTCTaGCTTTTTCTCTTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: KCFVHSGRLQLKGTCGPRVVLLF*LFLLLF
Trigger: AAAAAGCAAGAGAAAAAGCAAGAACAAGAGGACAAC...CCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS-3UTR CAA 90 bp AAATGTTTTGTCCACAGTGGACGATTACAGCTGAAGGGTACTTGTGGCCCAAGGACTTCCTGTATTAAATaGTGTGAAATAGTCTCCCGT +
Preference number: 5 (lower is better)
Translates to: KCFVHSGRLQLKGTCGPRTSCIK*CEIVSR
Trigger: ACGGGAGACTATTTCACACAATTTAATACAGGAAGT...CCTTGGGCCACAAGTACCCTTCAGCTGTAATCGTCCACTGTGGACAAAACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS GCA 72 bp GGGACCACGCGGTGGGGCCCGAAGGAGCTGGCTGCCTaGTGCGGGTTCTCGGAGAGCAGGTCCCCACGCAGG +
Preference number: 6 (lower is better)
Translates to: GTTRWGPKELAA*CGFSESRSPRR
Trigger: CCTGCGTGGGGACCTGCTCTCCGAGAACCCGCAGCAGGCAGCCAGCTCCTTCGGGCCCCACCGCGTGGTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS GCA 72 bp GTCAGGGACCACGCGGTGGGGCCCGAAGGAGCTGGCTaGCTGCTGCGGGTTCTCGGAGAGCAGGTCCCCACG +
Preference number: 6 (lower is better)
Translates to: VRDHAVGPEGAG*LLRVLGEQVPT
Trigger: CGTGGGGACCTGCTCTCCGAGAACCCGCAGCAGGCAGCCAGCTCCTTCGGGCCCCACCGCGTGGTCCCTGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS CCA 72 bp GCTGCCGCCGCCACTGCTGCCGCTCAAACAGCAGGGTaGCGCGAGCCCCCTGAATCCTCCGCCGGTCCCAGT +
Preference number: 6 (lower is better)
Translates to: AAAATAAAQTAG*REPPESSAGPS
Trigger: ACTGGGACCGGCGGAGGATTCAGGGGGCTCGCGCCACCCTGCTGTTTGAGCGGCAGCAGTGGCGGCGGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS CCA 72 bp TGGGTCATGCCCTTCCAGCGGTCAGGGACCACGCGGTaGGGCCCGAAGGAGCTGGCTGCCTGCTGCGGGTTC +
Preference number: 6 (lower is better)
Translates to: WVMPFQRSGTTR*GPKELAACCGF
Trigger: GAACCCGCAGCAGGCAGCCAGCTCCTTCGGGCCCCACCGCGTGGTCCCTGACCGCTGGAAGGGCATGACCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS CAA 90 bp ACCCGCTTCTGCCTGCACAGCTCCGCGTGCCTCCTCTTTGCCAGGTaGGCGTCCTGCCGCAAGTCCCTGGGCAGCGCCACCGCCATGGTC +
Preference number: 6 (lower is better)
Translates to: TRFCLHSSACLLFAR*ASCRKSLGSATAMV
Trigger: GACCATGGCGGTGGCGCTGCCCAGGGACTTGCGGCAGGACGCCAACCTGGCAAAGAGGAGGCACGCGGAGCTGTGCAGGCAGAAGCGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS TCA 72 bp TGCTGCCGCTCAAACAGCAGGGTGGCGCGAGCCCCCTaGATCCTCCGCCGGTCCCAGTCCAGGTCTCGCTGG +
Preference number: 6 (lower is better)
Translates to: CCRSNSRVARAP*ILRRSQSRSRW
Trigger: CCAGCGAGACCTGGACTGGGACCGGCGGAGGATTCAGGGGGCTCGCGCCACCCTGCTGTTTGAGCGGCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS GCA 72 bp GGACTAGGCGGATCTGCTCCAGCTGCTCCTGGGTCATaGCCTTCCAGCGGTCAGGGACCACGCGGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: GLGGSAPAAPGS*PSSGQGPRGGA
Trigger: GGCCCCACCGCGTGGTCCCTGACCGCTGGAAGGGCATGACCCAGGAGCAGCTGGAGCAGATCCGCCTAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS GCA 72 bp CCGCTTCTGCCTGCACAGCTCCGCGTGCCTCCTCTTTaGCAGGTTGGCGTCCTGCCGCAAGTCCCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: PLLPAQLRVPPL*QVGVLPQVPGQ
Trigger: CTGCCCAGGGACTTGCGGCAGGACGCCAACCTGGCAAAGAGGAGGCACGCGGAGCTGTGCAGGCAGAAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS GCA 72 bp AGGTTGCTGCTGTCCAGAGCTCTGCGCAGGTCGCGCTaGCGCCGCCACTGCTGCCGCTCAAACAGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: RLLLSRALRRSR*RRHCCRSNSRV
Trigger: CACCCTGCTGTTTGAGCGGCAGCAGTGGCGGCGGCAGCGCGACCTGCGCAGAGCTCTGGACAGCAGCAACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS CCA 72 bp TCCTCTTTGCCAGGTTGGCGTCCTGCCGCAAGTCCCTaGGCAGCGCCACCGCCATGGTCTGGGAACCCATGG +
Preference number: 6 (lower is better)
Translates to: SSLPGWRPAASP*AAPPPWSGNPW
Trigger: CCATGGGTTCCCAGACCATGGCGGTGGCGCTGCCCAGGGACTTGCGGCAGGACGCCAACCTGGCAAAGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS GCA 72 bp GCGTTGAAGACCCGCTTCTGCCTGCACAGCTCCGCGTaGCTCCTCTTTGCCAGGTTGGCGTCCTGCCGCAAG +
Preference number: 6 (lower is better)
Translates to: ALKTRFCLHSSA*LLFARLASCRK
Trigger: CTTGCGGCAGGACGCCAACCTGGCAAAGAGGAGGCACGCGGAGCTGTGCAGGCAGAAGCGGGTCTTCAACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS GCA 72 bp ATTTGCTGCTTCTGGACTAGGCGGATCTGCTCCAGCTaGTCCTGGGTCATGCCCTTCCAGCGGTCAGGGACC +
Preference number: 6 (lower is better)
Translates to: ICCFWTRRICSS*SWVMPFQRSGT
Trigger: GGTCCCTGACCGCTGGAAGGGCATGACCCAGGAGCAGCTGGAGCAGATCCGCCTAGTCCAGAAGCAGCAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS CAA 72 bp TCTGGAGGTGCTTGGCTGTCTCGTCAAACTGCAGCCTaGTCTCTGTGTAGAGGGCCTCTCTGCACGCCGGCA +
Preference number: 6 (lower is better)
Translates to: SGGAWLSRQTAA*SLCRGPLCTPA
Trigger: TGCCGGCGTGCAGAGAGGCCCTCTACACAGAGACAAGGCTGCAGTTTGACGAGACAGCCAAGCACCTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466226.1
CDS CAA 72 bp TGCGGGTTCTCGGAGAGCAGGTCCCCACGCAGGAGGTaGGTGATCTCGGCCAAGTTGTCCTCTTGTTCTTGC +
Preference number: 6 (lower is better)
Translates to: CGFSESRSPRRR*VISAKLSSCSC
Trigger: GCAAGAACAAGAGGACAACTTGGCCGAGATCACCAACCTCCTGCGTGGGGACCTGCTCTCCGAGAACCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS CAA 90 bp TTTCCAGCTTCTGGAGGTGCTTGGCTGTCTCGTCAAACTGCAGCCTaGTCTCTGTGTAGAGGGCCTCTCTGCACGCCGGCATCCAACTGG +
Preference number: 6 (lower is better)
Translates to: FPASGGAWLSRQTAA*SLCRGPLCTPASNW
Trigger: CCAGTTGGATGCCGGCGTGCAGAGAGGCCCTCTACACAGAGACAAGGCTGCAGTTTGACGAGACAGCCAAGCACCTCCAGAAGCTGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466226.1
CDS CAA 90 bp GCTGCCTGCTGCGGGTTCTCGGAGAGCAGGTCCCCACGCAGGAGGTaGGTGATCTCGGCCAAGTTGTCCTCTTGTTCTTGCTTTTTCTCT +
Preference number: 6 (lower is better)
Translates to: AACCGFSESRSPRRR*VISAKLSSCSCFFS
Trigger: AGAGAAAAAGCAAGAACAAGAGGACAACTTGGCCGAGATCACCAACCTCCTGCGTGGGGACCTGCTCTCCGAGAACCCGCAGCAGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS TCA 72 bp CTTCAGTGTCTCCCCCAATTATCCTGTTTCTGGCGTTaGAGACCCGCTTCTGCCTGCACAGCTCCGCGTGCC +
Preference number: 6 (lower is better)
Translates to: LQCLPQLSCFWR*RPASACTAPRA
Trigger: GGCACGCGGAGCTGTGCAGGCAGAAGCGGGTCTTCAACGCCAGAAACAGGATAATTGGGGGAGACACTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS GCA 72 bp CCAATTATCCTGTTTCTGGCGTTGAAGACCCGCTTCTaGCTGCACAGCTCCGCGTGCCTCCTCTTTGCCAGG +
Preference number: 6 (lower is better)
Translates to: PIILFLALKTRF*LHSSACLLFAR
Trigger: CCTGGCAAAGAGGAGGCACGCGGAGCTGTGCAGGCAGAAGCGGGTCTTCAACGCCAGAAACAGGATAATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS CCA 72 bp CTGTGTAGAGGGCCTCTCTGCACGCCGGCATCCAACTaGGACCCCGACACGGAAAGTGTTTTCCACATGACT +
Preference number: 6 (lower is better)
Translates to: LCRGPLCTPASN*DPDTESVFHMT
Trigger: AGTCATGTGGAAAACACTTTCCGTGTCGGGGTCCCAGTTGGATGCCGGCGTGCAGAGAGGCCCTCTACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466226.1
CDS CAA 72 bp GCTTCAGTGTCTCCCCCAATTATCCTGTTTCTGGCGTaGAAGACCCGCTTCTGCCTGCACAGCTCCGCGTGC +
Preference number: 6 (lower is better)
Translates to: ASVSPPIILFLA*KTRFCLHSSAC
Trigger: GCACGCGGAGCTGTGCAGGCAGAAGCGGGTCTTCAACGCCAGAAACAGGATAATTGGGGGAGACACTGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS CAA 90 bp ACATCCCAGGCTTCAGTGTCTCCCCCAATTATCCTGTTTCTGGCGTaGAAGACCCGCTTCTGCCTGCACAGCTCCGCGTGCCTCCTCTTT +
Preference number: 6 (lower is better)
Translates to: TSQASVSPPIILFLA*KTRFCLHSSACLLF
Trigger: AAAGAGGAGGCACGCGGAGCTGTGCAGGCAGAAGCGGGTCTTCAACGCCAGAAACAGGATAATTGGGGGAGACACTGAAGCCTGGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614167.2
CDS TCA 72 bp CTGGGACCCCGACACGGAAAGTGTTTTCCACATGACTaGGGTGTCATTGCAGGTGTTTCCCTCCTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: LGPRHGKCFPHD*GVIAGVSLLEG
Trigger: GCCCTCCAGGAGGGAAACACCTGCAATGACACCTCAGTCATGTGGAAAACACTTTCCGTGTCGGGGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466226.1
CDS TCA 72 bp GGTTCTCGGAGAGCAGGTCCCCACGCAGGAGGTTGGTaGTCTCGGCCAAGTTGTCCTCTTGTTCTTGCTTTT +
Preference number: 6 (lower is better)
Translates to: GSRRAGPHAGGW*SRPSCPLVLAF
Trigger: AAAAGCAAGAACAAGAGGACAACTTGGCCGAGATCACCAACCTCCTGCGTGGGGACCTGCTCTCCGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466226.1
ENST00000614167.2
CDS CCA 72 bp CACATGACTGAGGTGTCATTGCAGGTGTTTCCCTCCTaGAGGGCAGGCTCTGACTTTTCTTTCCCCACAGGG +
Preference number: 6 (lower is better)
Translates to: HMTEVSLQVFPS*RAGSDFSFPTG
Trigger: CCCTGTGGGGAAAGAAAAGTCAGAGCCTGCCCTCCAGGAGGGAAACACCTGCAATGACACCTCAGTCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466226.1
CDS CAA 72 bp GCCTTTCTGGTGGTGCTTTCCAGCTTCTGGAGGTGCTaGGCTGTCTCGTCAAACTGCAGCCTTGTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: AFLVVLSSFWRC*AVSSNCSLVSV
Trigger: CACAGAGACAAGGCTGCAGTTTGACGAGACAGCCAAGCACCTCCAGAAGCTGGAAAGCACCACCAGAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466226.1
ENST00000614167.2
ENST00000621287.1
CDS CAA 90 bp TTTCCAGCTTCTGGAGGTGCTTGGCTGTCTCGTCAAACTGCAGCCTaGTCTCTGTGTAGAGGGCCTCTGCGCATTTTTGTTCAGCACGGG +
Preference number: 6 (lower is better)
Translates to: FPASGGAWLSRQTAA*SLCRGPLRIFVQHG
Trigger: CCCGTGCTGAACAAAAATGCGCAGAGGCCCTCTACACAGAGACAAGGCTGCAGTTTGACGAGACAGCCAAGCACCTCCAGAAGCTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614167.2
ENST00000621287.1
CDS CAA 90 bp CTCCAGTCGTCGAGCCCGAGGTCGCGGAGTACCTATACCTGGCTCTaGTTGAAGTCTTTCACAGATGCACAAACTGCCTTTCTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: LQSSSPRSRSTYTWL*LKSFTDAQTAFLVV
Trigger: CACCACCAGAAAGGCAGTTTGTGCATCTGTGAAAGACTTCAACAAGAGCCAGGTATAGGTACTCCGCGACCTCGGGCTCGACGACTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621287.1
CDS TCA 72 bp GTCATTGCAGGTGTTTCCCTCCTGGAGGGCAGGCTCTaGCTTTTCTTTCCCCACAGGGCCAAAGTAGCATGT +
Preference number: 6 (lower is better)
Translates to: VIAGVSLLEGRL*LFFPHRAKVAC
Trigger: ACATGCTACTTTGGCCCTGTGGGGAAAGAAAAGTCAGAGCCTGCCCTCCAGGAGGGAAACACCTGCAATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466226.1
CDS TCA 72 bp CCAACTGGGACCCCGACACGGAAAGTGTTTTCCACATaGCTGAGGTGTCATTGCAGGTGTTTCCCTCCTGGA +
Preference number: 6 (lower is better)
Translates to: PTGTPTRKVFST*LRCHCRCFPPG
Trigger: TCCAGGAGGGAAACACCTGCAATGACACCTCAGTCATGTGGAAAACACTTTCCGTGTCGGGGTCCCAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466226.1
CDS CCA 72 bp CCTTTCTGGTGGTGCTTTCCAGCTTCTGGAGGTGCTTaGCTGTCTCGTCAAACTGCAGCCTTGTCTCTGTGT +
Preference number: 6 (lower is better)
Translates to: PFWWCFPASGGA*LSRQTAALSLC
Trigger: ACACAGAGACAAGGCTGCAGTTTGACGAGACAGCCAAGCACCTCCAGAAGCTGGAAAGCACCACCAGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466226.1
ENST00000614167.2
ENST00000621287.1
CDS TCA 72 bp GCCCGAGGTCGCGGAGTACCTATACCTGGCTCTTGTTaGAGTCTTTCACAGATGCACAAACTGCCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: ARGRGVPIPGSC*SLSQMHKLPFW
Trigger: CCAGAAAGGCAGTTTGTGCATCTGTGAAAGACTTCAACAAGAGCCAGGTATAGGTACTCCGCGACCTCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621287.1
CDS CCA 72 bp CAGTCGTCGAGCCCGAGGTCGCGGAGTACCTATACCTaGCTCTTGTTGAAGTCTTTCACAGATGCACAAACT +
Preference number: 6 (lower is better)
Translates to: QSSSPRSRSTYT*LLLKSFTDAQT
Trigger: AGTTTGTGCATCTGTGAAAGACTTCAACAAGAGCCAGGTATAGGTACTCCGCGACCTCGGGCTCGACGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621287.1
CDS CAA 72 bp TCTGGAGGTGCTTGGCTGTCTCGTCAAACTGCAGCCTaGTCTCTGTGTAGAGGGCCTCTGCGCATTTTTGTT +
Preference number: 6 (lower is better)
Translates to: SGGAWLSRQTAA*SLCRGPLRIFV
Trigger: AACAAAAATGCGCAGAGGCCCTCTACACAGAGACAAGGCTGCAGTTTGACGAGACAGCCAAGCACCTCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614167.2
ENST00000621287.1
CDS CAA 72 bp TCGAGCCCGAGGTCGCGGAGTACCTATACCTGGCTCTaGTTGAAGTCTTTCACAGATGCACAAACTGCCTTT +
Preference number: 6 (lower is better)
Translates to: SSPRSRSTYTWL*LKSFTDAQTAF
Trigger: AAAGGCAGTTTGTGCATCTGTGAAAGACTTCAACAAGAGCCAGGTATAGGTACTCCGCGACCTCGGGCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621287.1
CDS GCA 72 bp CTGGCTCTTGTTGAAGTCTTTCACAGATGCACAAACTaGCTTTCTGGTGGTGCTTTCCAGCTTCTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: LALVEVFHRCTN*LSGGAFQLLEV
Trigger: CACCTCCAGAAGCTGGAAAGCACCACCAGAAAGGCAGTTTGTGCATCTGTGAAAGACTTCAACAAGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466226.1
ENST00000614167.2
ENST00000621287.1
CDS TCA 72 bp TCGGACAGATCAAATTCACGGCGAGTTTCTGGCTTCTaGAAGCTCTGTTGGAAGTCATTGATAGCCCTACAG +
Preference number: 6 (lower is better)
Translates to: SDRSNSRRVSGF*KLCWKSLIALQ
Trigger: CTGTAGGGCTATCAATGACTTCCAACAGAGCTTTCAGAAGCCAGAAACTCGCCGTGAATTTGATCTGTCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614167.2
ENST00000621287.1
CDS GCA 72 bp TTTTGTTCAGCACGGGCGTTCTTCCATTCCCTTTGCTaGTGCAAAGACCATTCTCTGTTTTGTTCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: FCSARAFFHSLC*CKDHSLFCSSW
Trigger: CCAAGAGGAACAAAACAGAGAATGGTCTTTGCAGCAGCAAAGGGAATGGAAGAACGCCCGTGCTGAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614167.2
ENST00000621287.1
CDS CAA 72 bp GCATTTTTGTTCAGCACGGGCGTTCTTCCATTCCCTTaGCTGCTGCAAAGACCATTCTCTGTTTTGTTCCTC +
Preference number: 6 (lower is better)
Translates to: AFLFSTGVLPFP*LLQRPFSVLFL
Trigger: GAGGAACAAAACAGAGAATGGTCTTTGCAGCAGCAAAGGGAATGGAAGAACGCCCGTGCTGAACAAAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614167.2
ENST00000621287.1
CDS CCA 72 bp CTGACTTTTCTTTCCCCACAGGGCCAAAGTAGCATGTaGCTGTCTGTGCACATTGGTAGGACTTTAAACAAA +
Preference number: 6 (lower is better)
Translates to: LTFLSPQGQSSM*LSVHIGRTLNK
Trigger: TTTGTTTAAAGTCCTACCAATGTGCACAGACAGCCACATGCTACTTTGGCCCTGTGGGGAAAGAAAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466226.1
CDS CAA 90 bp GGACAGATCAAATTCACGGCGAGTTTCTGGCTTCTGAAAGCTCTGTaGGAAGTCATTGATAGCCCTACAGAGATTTTTCCTATCCCTCTT +
Preference number: 6 (lower is better)
Translates to: GQIKFTASFWLLKAL*EVIDSPTEIFPIPL
Trigger: AAGAGGGATAGGAAAAATCTCTGTAGGGCTATCAATGACTTCCAACAGAGCTTTCAGAAGCCAGAAACTCGCCGTGAATTTGATCTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614167.2
ENST00000621287.1
CDS CAA 72 bp AAATTCACGGCGAGTTTCTGGCTTCTGAAAGCTCTGTaGGAAGTCATTGATAGCCCTACAGAGATTTTTCCT +
Preference number: 6 (lower is better)
Translates to: KFTASFWLLKAL*EVIDSPTEIFP
Trigger: AGGAAAAATCTCTGTAGGGCTATCAATGACTTCCAACAGAGCTTTCAGAAGCCAGAAACTCGCCGTGAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614167.2
ENST00000621287.1