RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIBC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000158423

Ensembl transcript IDs: ENST00000329209.9, ENST00000375327.6, ENST00000414955.6, ENST00000457095.5, ENST00000490702.1

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCAACAACGATTTCTCAAGCGCATAACTAAAAGATGCCTCCAATaGACCTGGGTCCCAATGTCAGTTCTGCTGCTTCTGAGCTGTGTG +
Preference number: 1 (lower is better)
Translates to: QQQRFLKRITKRCLQ*TWVPMSVLLLLSCV
Trigger: CACACAGCTCAGAAGCAGCAGAACTGACATTGGGACCCAGGTCCATTGGAGGCATCTTTTAGTTATGCGCTTGAGAAATCGTTGTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR CCA 90 bp CAACGATTTCTCAAGCGCATAACTAAAAGATGCCTCCAATGGACCTaGGTCCCAATGTCAGTTCTGCTGCTTCTGAGCTGTGTGATTTTG +
Preference number: 1 (lower is better)
Translates to: QRFLKRITKRCLQWT*VPMSVLLLLSCVIL
Trigger: CAAAATCACACAGCTCAGAAGCAGCAGAACTGACATTGGGACCCAGGTCCATTGGAGGCATCTTTTAGTTATGCGCTTGAGAAATCGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR TCA 90 bp AAACTGCTGGTGATACTGGGCTGTAGGTTGATTGGTGTAGATTACTaGATTCAGGTAATCCTGCCTGTGAAAGAAGTCCAGAGGTCTCAG +
Preference number: 1 (lower is better)
Translates to: KLLVILGCRLIGVDY*IQVILPVKEVQRSQ
Trigger: CTGAGACCTCTGGACTTCTTTCACAGGCAGGATTACCTGAATTCAGTAATCTACACCAATCAACCTACAGCCCAGTATCACCAGCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
3UTR TCA 90 bp TGGGAGATGGGTAGACATGAAAGAGATGGTTCATCTTCAGTAGGCTaGCATTTTAGGGAGAAGACAGATATTAAACAAATACTTTCACAA +
Preference number: 1 (lower is better)
Translates to: WEMGRHERDGSSSVG*HFREKTDIKQILSQ
Trigger: TTGTGAAAGTATTTGTTTAATATCTGTCTTCTCCCTAAAATGTCAGCCTACTGAAGATGAACCATCTCTTTCATGTCTACCCATCTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR TCA 90 bp GCAGAGCCATTAGGTCTGTCTGCACTGTGCTGCCTCCACGTAATGGAGTGCCAATACACTGTCAGTTACTaGAGGAAGTCAGGGAGGTTG +
Preference number: 2 (lower is better)
Translates to: AEPLGLSALCCLHVMECQYTVSY*RKSGRL
Trigger: CAACCTCCCTGACTTCCTTCAGTAACTGACAGTGTA...TTGGCACTCCATTACGTGGAGGCAGCACAGTGCAGACAGACCTAATGGCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR GCA 90 bp ACACTGAGCTCCTTGCTGTTCCTAAGACCTGTCAGACACTGTACTATGCAACTGGCCATTAGGTCTGTCTaGACTGTGCTGCCTCCACGT +
Preference number: 2 (lower is better)
Translates to: TLSSLLFLRPVRHCTMQLAIRSV*TVLPPR
Trigger: ACGTGGAGGCAGCACAGTGCAGACAGACCTAATGGC...CAGTTGCATAGTACAGTGTCTGACAGGTCTTAGGAACAGCAAGGAGCTCAGTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR CCA 90 bp GTACACAGGGTATTAAGAGGGTTTTGGATGGTGGAAAAGAGGAAGGCTTCCAGGGGAAGTCAGGGAGGTTaGGGTCTGCACAACCTAACA +
Preference number: 2 (lower is better)
Translates to: VHRVLRGFWMVEKRKASRGSQGG*GLHNLT
Trigger: TGTTAGGTTGTGCAGACCCCAACCTCCCTGACTTCC...CCTGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTCTTAATACCCTGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR CAA 90 bp TGGCAAGAGCAATGGCAGGGATGTACACAGGGTATTAAGAGGGTTTaGGATGGTGGAAAAGAGGAAGGCTTCCAGGAAGAGGTGATCCTT +
Preference number: 2 (lower is better)
Translates to: WQEQWQGCTQGIKRV*DGGKEEGFQEEVIL
Trigger: AAGGATCACCTCTTCCTGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTCTTAATACCCTGTGTACATCCCTGCCATTGCTCTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR TCA 90 bp GTTAGTGTCCGAGTTGTAGGGATGTGGAAGGAACTAGGTGCAGCAACAACGATTGTAACAGGGTTGATGTaGAGGGTGAACAGTGCAAGT +
Preference number: 2 (lower is better)
Translates to: VSVRVVGMWKELGAATTIVTGLM*RVNSAS
Trigger: ACTTGCACTGTTCACCCTTCACATCAACCCTGTTAC...AATCGTTGTTGCTGCACCTAGTTCCTTCCACATCCCTACAACTCGGACACTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR GCA 90 bp CACACTGAGCTCCTTGCTGTTCCTAAGACCTGTCAGACACTGTACTATGCAACTTCCAGCAGAACAGAGTaGTGTAACAGGGTTGATGTG +
Preference number: 2 (lower is better)
Translates to: HTELLAVPKTCQTLYYATSSRTE*CNRVDV
Trigger: CACATCAACCCTGTTACAGCACTCTGTTCTGCTGGA...AGTTGCATAGTACAGTGTCTGACAGGTCTTAGGAACAGCAAGGAGCTCAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR CCA 90 bp AGAGAGATAGACATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTCCTCTCCCTCCCTTaGCATTTATCTCCACCACTA +
Preference number: 2 (lower is better)
Translates to: REIDILNLAAAGVKLLVILLSLP*HLSPPL
Trigger: TAGTGGTGGAGATAAATGCCAAGGGAGGGAGAGGAG...TATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGATGTCTATCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
3UTR-3UTR CCA 90 bp GTACACAGGGTATTAAGAGGGTTTTGGATGGTGGAAAAGAGGAAGGCTTCCAGGAACCCTATGGATAAGTaGACCTCCCCACACAGTTCT +
Preference number: 2 (lower is better)
Translates to: VHRVLRGFWMVEKRKASRNPMDK*TSPHSS
Trigger: AGAACTGTGTGGGGAGGTCCACTTATCCATAGGGTT...CCTGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTCTTAATACCCTGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR GCA 90 bp TTCACTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAATGCTGTCTGCACTGTGCTaGCTCCACGTAATGGAGTGC +
Preference number: 2 (lower is better)
Translates to: FTHPAICSASFVFVCVRMLSALC*LHVMEC
Trigger: GCACTCCATTACGTGGAGGCAGCACAGTGCAGACAG...CATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR TCA 90 bp GTTAGTGTCCGAGTTGTAGGGATGTGGAAGGAACTAGGTGCAGCAACAACGATTTCATCTTCAGTAGGCTaGCATTTTAGGGAGAAGACA +
Preference number: 2 (lower is better)
Translates to: VSVRVVGMWKELGAATTISSSVG*HFREKT
Trigger: TGTCTTCTCCCTAAAATGTCAGCCTACTGAAGATGA...AATCGTTGTTGCTGCACCTAGTTCCTTCCACATCCCTACAACTCGGACACTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR GCA 90 bp CATTCCTGTTTCACTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTTTCTGGTCCCCTGGCTaGTGTACTCAGCTTAGGACA +
Preference number: 2 (lower is better)
Translates to: HSCFTHPAICSASFVFVCFWSPG*CTQLRT
Trigger: TGTCCTAAGCTGAGTACAGCAGCCAGGGGACCAGAA...ACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAGTGAAACAGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR CCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTCCCTCTCTCCATaGTTCCTCACCATCCCTCCT +
Preference number: 2 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSLSLSP*FLTIPP
Trigger: AGGAGGGATGGTGAGGAACCATGGAGAGAGGGAAAG...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414955.6
3UTR-3UTR CCA 90 bp GTTAGTGTCCGAGTTGTAGGGATGTGGAAGGAACTAGGTGCAGCAACAACGATTTACAACTACAATAAGTaGTCCAGCAGAACAGAGTGC +
Preference number: 2 (lower is better)
Translates to: VSVRVVGMWKELGAATTIYNYNK*SSRTEC
Trigger: GCACTCTGTTCTGCTGGACCACTTATTGTAGTTGTA...AATCGTTGTTGCTGCACCTAGTTCCTTCCACATCCCTACAACTCGGACACTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR GCA 90 bp CAACGATTTCTCAAGCGCATAACTAAAAGATGCCTCCAATGGACCTGGGTCCCAAAGGGAAAATTCATTTaGCCAAACCAGCTAGTAAGT +
Preference number: 2 (lower is better)
Translates to: QRFLKRITKRCLQWTWVPKGKFI*PNQLVS
Trigger: ACTTACTAGCTGGTTTGGGCAAATGAATTTTCCCTT...TGGGACCCAGGTCCATTGGAGGCATCTTTTAGTTATGCGCTTGAGAAATCGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR GCA 90 bp TTCACTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAATGCGCATAACTAAAAGATaGCTCCAATGGACCTGGGTC +
Preference number: 2 (lower is better)
Translates to: FTHPAICSASFVFVCVRMRITKR*LQWTWV
Trigger: GACCCAGGTCCATTGGAGGCATCTTTTAGTTATGCG...CATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR GCA 90 bp CATTTCATATCTCTGAATCTCAGTCTAAGGGCCATGTGCTGGGTTCTAATGATATCAGACACTGTACTATaGAACTGGGAGATGGGTAGA +
Preference number: 2 (lower is better)
Translates to: HFISLNLSLRAMCWVLMISDTVL*NWEMGR
Trigger: TCTACCCATCTCCCAGTTGCATAGTACAGTGTCTGA...TATCATTAGAACCCAGCACATGGCCCTTAGACTGAGATTCAGAGATATGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR CCA 90 bp CTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAATGTTTAGAGGGTTTTGGATGGTaGAAAAGAGGAAGGCTTCCA +
Preference number: 2 (lower is better)
Translates to: LIQPFVQQVLCLCVYECLEGFGW*KRGRLP
Trigger: TGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTC...TAAACATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR CCA 90 bp CATTCCTGTTTCACTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTAACTCCCTGTCTAGTTaGGGACACAGATCAAACATA +
Preference number: 2 (lower is better)
Translates to: HSCFTHPAICSASFVFVCNSLSS*GHRSNI
Trigger: TATGTTTGATCTGTGTCCCCAACTAGACAGGGAGTT...ACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAGTGAAACAGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR CCA 90 bp CATTCCTGTTTCACTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTATTAAGAGGGTTTTaGATGGTGGAAAAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: HSCFTHPAICSASFVFVCVLRGF*MVEKRK
Trigger: CTTCCTCTTTTCCACCATCCAAAACCCTCTTAATAC...ACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAGTGAAACAGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR CCA 72 bp GGGTCTGCACAACCTAACATTTCAGCACCAACCCTATaGATAAGTGGACCTCCCCACACAGTTCTGGTCCCC +
Preference number: 3 (lower is better)
Translates to: GSAQPNISAPTL*ISGPPHTVLVP
Trigger: GGGGACCAGAACTGTGTGGGGAGGTCCACTTATCCATAGGGTTGGTGCTGAAATGTTAGGTTGTGCAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR GCA 72 bp AACCAGCTAGTAAGTGGCAGAGCCATTAGGTCTGTCTaGACTGTGCTGCCTCCACGTAATGGAGTGCCAAAC +
Preference number: 3 (lower is better)
Translates to: NQLVSGRAIRSV*TVLPPRNGVPN
Trigger: GTTTGGCACTCCATTACGTGGAGGCAGCACAGTGCAGACAGACCTAATGGCTCTGCCACTTACTAGCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR CAA 90 bp GTACACAGGGTATTAAGAGGGTTTTGGATGGTGGAAAAGAGGAAGGCTTCCAGGAGGAAGTCAGGGAGGTaGGGGTCTGCACAACCTAAC +
Preference number: 3 (lower is better)
Translates to: VHRVLRGFWMVEKRKASRRKSGR*GSAQPN
Trigger: GTTAGGTTGTGCAGACCCCAACCTCCCTGACTTCCT...CCTGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTCTTAATACCCTGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR CCA 72 bp GCTACACTGTCAGTTACTGAAGGAAGTCAGGGAGGTTaGGGTCTGCACAACCTAACATTTCAGCACCAACCC +
Preference number: 3 (lower is better)
Translates to: ATLSVTEGSQGG*GLHNLTFQHQP
Trigger: GGGTTGGTGCTGAAATGTTAGGTTGTGCAGACCCCAACCTCCCTGACTTCCTTCAGTAACTGACAGTGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR CCA 72 bp CTCAAGCGCATAACTAAAAGATGCCTCCAATGGACCTaGGTCCCAATGTCAGTTCTGCTGCTTCTGAGCTGT +
Preference number: 3 (lower is better)
Translates to: LKRITKRCLQWT*VPMSVLLLLSC
Trigger: ACAGCTCAGAAGCAGCAGAACTGACATTGGGACCCAGGTCCATTGGAGGCATCTTTTAGTTATGCGCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR CCA 72 bp AATGGCAGGGATGTACACAGGGTATTAAGAGGGTTTTaGATGGTGGAAAAGAGGAAGGCTTCCAGGAAGAGG +
Preference number: 3 (lower is better)
Translates to: NGRDVHRVLRGF*MVEKRKASRKR
Trigger: CCTCTTCCTGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTCTTAATACCCTGTGTACATCCCTGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR CCA 72 bp CGATTTCTCAAGCGCATAACTAAAAGATGCCTCCAATaGACCTGGGTCCCAATGTCAGTTCTGCTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: RFLKRITKRCLQ*TWVPMSVLLLL
Trigger: CAGAAGCAGCAGAACTGACATTGGGACCCAGGTCCATTGGAGGCATCTTTTAGTTATGCGCTTGAGAAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR GCA 72 bp CAGCAACAACGATTTCTCAAGCGCATAACTAAAAGATaGCTCCAATGGACCTGGGTCCCAATGTCAGTTCTG +
Preference number: 3 (lower is better)
Translates to: QQQRFLKRITKR*LQWTWVPMSVL
Trigger: CAGAACTGACATTGGGACCCAGGTCCATTGGAGGCATCTTTTAGTTATGCGCTTGAGAAATCGTTGTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR-3UTR CAA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTCCTCCTCTCCCTCCCTaGGCATTTATCTCCACCACT +
Preference number: 3 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLPPLPP*AFISTT
Trigger: AGTGGTGGAGATAAATGCCAAGGGAGGGAGAGGAGG...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414955.6
3UTR-3UTR CAA 90 bp ACACTGAGCTCCTTGCTGTTCCTAAGACCTGTCAGACACTGTACTATGCAACTGGAAGGGAAAATTCATTaGCCCAAACCAGCTAGTAAG +
Preference number: 3 (lower is better)
Translates to: TLSSLLFLRPVRHCTMQLEGKIH*PKPASK
Trigger: CTTACTAGCTGGTTTGGGCAAATGAATTTTCCCTTC...CAGTTGCATAGTACAGTGTCTGACAGGTCTTAGGAACAGCAAGGAGCTCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR TCA 72 bp CAAACTAATCAAGAACAATGCTACACTGTCAGTTACTaGAGGAAGTCAGGGAGGTTGGGGTCTGCACAACCT +
Preference number: 3 (lower is better)
Translates to: QTNQEQCYTVSY*RKSGRLGSAQP
Trigger: AGGTTGTGCAGACCCCAACCTCCCTGACTTCCTTCAGTAACTGACAGTGTAGCATTGTTCTTGATTAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR TCA 72 bp GTGATACTGGGCTGTAGGTTGATTGGTGTAGATTACTaGATTCAGGTAATCCTGCCTGTGAAAGAAGTCCAG +
Preference number: 3 (lower is better)
Translates to: VILGCRLIGVDY*IQVILPVKEVQ
Trigger: CTGGACTTCTTTCACAGGCAGGATTACCTGAATTCAGTAATCTACACCAATCAACCTACAGCCCAGTATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
3UTR-3UTR CAA 90 bp GTTAGTGTCCGAGTTGTAGGGATGTGGAAGGAACTAGGTGCAGCAACAACGATTCTGAGCTGTGTGATTTaGGGTAAATCATTTCATATC +
Preference number: 3 (lower is better)
Translates to: VSVRVVGMWKELGAATTILSCVI*GKSFHI
Trigger: GATATGAAATGATTTACCCAAAATCACACAGCTCAG...AATCGTTGTTGCTGCACCTAGTTCCTTCCACATCCCTACAACTCGGACACTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR TCA 72 bp GGTAGACATGAAAGAGATGGTTCATCTTCAGTAGGCTaGCATTTTAGGGAGAAGACAGATATTAAACAAATA +
Preference number: 3 (lower is better)
Translates to: GRHERDGSSSVG*HFREKTDIKQI
Trigger: TATTTGTTTAATATCTGTCTTCTCCCTAAAATGTCAGCCTACTGAAGATGAACCATCTCTTTCATGTCTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp GCACCAACCCTATGGATAAGTGGACCTCCCCACACAGTTCTGGTCCCCTGGCTGTGGTTGTTCAGGGCCTaGACATCCACCCCCATGACT +
Preference number: 4 (lower is better)
Translates to: APTLWISGPPHTVLVPWLWLFRA*TSTPMT
Trigger: AGTCATGGGGGTGGATGTCCAGGCCCTGAACAACCA...CAGCCAGGGGACCAGAACTGTGTGGGGAGGTCCACTTATCCATAGGGTTGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp GCACCAACCCTATGGATAAGTGGACCTCCCCACACAGTTCTGGTCCCCTGGCTGTTCTGGTCCCCTGGCTaGTGTACTCAGCTTAGGACA +
Preference number: 4 (lower is better)
Translates to: APTLWISGPPHTVLVPWLFWSPG*CTQLRT
Trigger: TGTCCTAAGCTGAGTACAGCAGCCAGGGGACCAGAA...CAGCCAGGGGACCAGAACTGTGTGGGGAGGTCCACTTATCCATAGGGTTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGGCCTGGCCAGATGGGTaGCCTGTGCATCCATGGCGA +
Preference number: 4 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRAWPDG*PVHPWR
Trigger: TCGCCATGGATGCACAGGCCACCCATCTGGCCAGGC...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR TCA 90 bp GCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGTTGATTGGTGTAGATCTGTCTCAGCAAGCGTaGGCTCAGGTCTCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: AAGVKLLVILGCRLIGVDLSQQA*AQVSPA
Trigger: GGCGGGGGAGACCTGAGCTCACGCTTGCTGAGACAG...ATCTACACCAATCAACCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp ATTTCAGCACCAACCCTATGGATAAGTGGACCTCCCCACACAGTTCTGGTCCCCCGCCCGTTCTTGAGCTaGTGCTTCTGCTCCCGAAAC +
Preference number: 4 (lower is better)
Translates to: ISAPTLWISGPPHTVLVPRPFLS*CFCSRN
Trigger: GTTTCGGGAGCAGAAGCAGCAGCTCAAGAACGGGCG...GGGGACCAGAACTGTGTGGGGAGGTCCACTTATCCATAGGGTTGGTGCTGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGCCCAGCCTGCACAGCTaGCTGCGCTTTGTTGGCGTT +
Preference number: 4 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRPSLHS*LRFVGV
Trigger: AACGCCAACAAAGCGCAGGCAGCTGTGCAGGCTGGG...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp CAGGTAATCCTGCCTGTGAAAGAAGTCCAGAGGTCTCAGCTGACATGCTTTCCCTGGCCTGTGCATCCATaGCGAGGCGCAGCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: QVILPVKEVQRSQLTCFPWPVHP*RGAAGY
Trigger: GTAACCAGCTGCGCCTCGCCATGGATGCACAGGCCA...GGGAAAGCATGTCAGCTGAGACCTCTGGACTTCTTTCACAGGCAGGATTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp CAGGTAATCCTGCCTGTGAAAGAAGTCCAGAGGTCTCAGCTGACATGCTTTCCCTCCAGCCTGGCCAGATaGGTGGCCTGTGCATCCATG +
Preference number: 4 (lower is better)
Translates to: QVILPVKEVQRSQLTCFPSSLAR*VACASM
Trigger: CATGGATGCACAGGCCACCCATCTGGCCAGGCTGGA...GGGAAAGCATGTCAGCTGAGACCTCTGGACTTCTTTCACAGGCAGGATTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp CAGGTAATCCTGCCTGTGAAAGAAGTCCAGAGGTCTCAGCTGACATGCTTTCCCCTCGTGCTCTGGTGCTaGATCTCCGCAAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: QVILPVKEVQRSQLTCFPLVLWC*ISARLA
Trigger: GGCCAACCTTGCGGAGATCCAGCACCAGAGCACGAG...GGGAAAGCATGTCAGCTGAGACCTCTGGACTTCTTTCACAGGCAGGATTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGAGCTCCAGCACTGCCTaGGCTGAGCTCATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRSSSTA*AELMVW
Trigger: CCAGACCATGAGCTCAGCCCAGGCAGTGCTGGAGCT...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGCCATGGCACACATCATaGCCGCACGACAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRPWHTS*PHDRTP
Trigger: AGGAGTCCTGTCGTGCGGCCATGATGTGTGCCATGG...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp CAGGTAATCCTGCCTGTGAAAGAAGTCCAGAGGTCTCAGCTGACATGCTTTCCCAGGTCACTCGTGCTCTaGTGCTGGATCTCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: QVILPVKEVQRSQLTCFPRSLVL*CWISAR
Trigger: CCTTGCGGAGATCCAGCACCAGAGCACGAGTGACCT...GGGAAAGCATGTCAGCTGAGACCTCTGGACTTCTTTCACAGGCAGGATTACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR TCA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGCCTCAAGAACTGCTCTaGCTCCGCCCAGCAACAACT +
Preference number: 4 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRPQELL*LRPATT
Trigger: AGTTGTTGCTGGGCGGAGTCAGAGCAGTTCTTGAGG...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR TCA 90 bp CTGGGTTCTAATGATACCATCGAATTAAATCCTGTCCTCAGAGAACTCCCTGTCCTGTCTCAGCAAGCGTaGGCTCAGGTCTCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LGSNDTIELNPVLRELPVLSQQA*AQVSPA
Trigger: GGCGGGGGAGACCTGAGCTCACGCTTGCTGAGACAG...GACAGGGAGTTCTCTGAGGACAGGATTTAATTCGATGGTATCATTAGAACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR TCA 90 bp CAGGTAATCCTGCCTGTGAAAGAAGTCCAGAGGTCTCAGCTGACATGCTTTCCCTACGGCGGCAGTTTCTaGACTCTTCCTCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: QVILPVKEVQRSQLTCFPYGGSF*TLPLAL
Trigger: CAGGGCAAGAGGAAGAGTTCAGAAACTGCCGCCGTA...GGGAAAGCATGTCAGCTGAGACCTCTGGACTTCTTTCACAGGCAGGATTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR TCA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGTCCAGAGGTCTCAGCTaGCATGCTTTCCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRSRGLS*HAFPLS
Trigger: GGAGAGAGGGAAAGCATGTCAGCTGAGACCTCTGGA...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp ATTTCAGCACCAACCCTATGGATAAGTGGACCTCCCCACACAGTTCTGGTCCCCTTGAGCTGCTGCTTCTaGTCCCGAAACTCCTGGACT +
Preference number: 4 (lower is better)
Translates to: ISAPTLWISGPPHTVLVPLSCCF*SRNSWT
Trigger: AGTCCAGGAGTTTCGGGAGCAGAAGCAGCAGCTCAA...GGGGACCAGAACTGTGTGGGGAGGTCCACTTATCCATAGGGTTGGTGCTGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGTCAGTAGGTCACTCGTaGTCTGGTGCTGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRSVGHS*SGAGSP
Trigger: CGGAGATCCAGCACCAGAGCACGAGTGACCTACTGA...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGGCTGCTCTGGAGTCATaGCCTTCCAGCAATAGGGCA +
Preference number: 4 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRAALES*PSSNRA
Trigger: TGCCCTATTGCTGGAAGGGCATGACTCCAGAGCAGC...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGCTGATGGCAGCTTGCTaGTCTGGAGTCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRLMAAC*SGVMPF
Trigger: GAAGGGCATGACTCCAGAGCAGCAAGCTGCCATCAG...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp GCACCAACCCTATGGATAAGTGGACCTCCCCACACAGTTCTGGTCCCCTGGCTGATGCAACTTTGTTCTTaGGTTACGGCGGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: APTLWISGPPHTVLVPWLMQLCS*VTAAVS
Trigger: AGAAACTGCCGCCGTAACCCAAGAACAAAGTTGCAT...CAGCCAGGGGACCAGAACTGTGTGGGGAGGTCCACTTATCCATAGGGTTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp CAGGTAATCCTGCCTGTGAAAGAAGTCCAGAGGTCTCAGCTGACATGCTTTCCCGGATCTCCGCAAGGTTaGCCTTCTGTTCACGCTGAC +
Preference number: 4 (lower is better)
Translates to: QVILPVKEVQRSQLTCFPGSPQG*PSVHAD
Trigger: GTCAGCGTGAACAGAAGGCCAACCTTGCGGAGATCC...GGGAAAGCATGTCAGCTGAGACCTCTGGACTTCTTTCACAGGCAGGATTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR TCA 90 bp GCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGTTGATTGGTGTAGATTCTCCCCCGCCTCCTTaGACCTCAAGAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AAGVKLLVILGCRLIGVDSPPPP*TSRTAL
Trigger: CAGAGCAGTTCTTGAGGTTCAAGGAGGCGGGGGAGA...ATCTACACCAATCAACCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGCTTGCTTCTTTCTGCTaGTTCCCGACGCTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRLASFC*FPTLSV
Trigger: GACCGAAAGCGTCGGGAAGCAGCAGAAAGAAGCAAG...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp CAACGATTTCTCAAGCGCATAACTAAAAGATGCCTCCAATGGACCTGGGTCCCATCCCCAGAGAAGTACTaGAGGCTGGCTGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: QRFLKRITKRCLQWTWVPSPEKY*RLAGPG
Trigger: TCCTGGTCCAGCCAGCCTGCAGTACTTCTCTGGGGA...TGGGACCCAGGTCCATTGGAGGCATCTTTTAGTTATGCGCTTGAGAAATCGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGTCTAGCCTCGATGGCTaGTGCTTCCTTGGTATCTGT +
Preference number: 4 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRSSLDG*CFLGIC
Trigger: ACAGATACCAAGGAAGCAGCAGCCATCGAGGCTAGA...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp AGGTTGGGGTCTGCACAACCTAACATTTCAGCACCAACCCTATGGATAAGTGGACCGTTCTTGAGCTGCTaGTTCTGCTCCCGAAACTCC +
Preference number: 4 (lower is better)
Translates to: RLGSAQPNISAPTLWISGPFLSC*FCSRNS
Trigger: GGAGTTTCGGGAGCAGAAGCAGCAGCTCAAGAACGG...TCCACTTATCCATAGGGTTGGTGCTGAAATGTTAGGTTGTGCAGACCCCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp GCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGTTGATTGGTGTAGATTCACTCGTGCTCTGGTaGTGGATCTCCGCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: AAGVKLLVILGCRLIGVDSLVLW*WISARL
Trigger: CAACCTTGCGGAGATCCAGCACCAGAGCACGAGTGA...ATCTACACCAATCAACCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp CAGGTAATCCTGCCTGTGAAAGAAGTCCAGAGGTCTCAGCTGACATGCTTTCCCCACAATTCCCTCTCCTaGTCTTCTAGCTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: QVILPVKEVQRSQLTCFPHNSLS*SSSSST
Trigger: AGTGCTGGAGCTAGAAGAGCAGGAGAGGGAATTGTG...GGGAAAGCATGTCAGCTGAGACCTCTGGACTTCTTTCACAGGCAGGATTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp GTACACAGGGTATTAAGAGGGTTTTGGATGGTGGAAAAGAGGAAGGCTTCCAGGCTGTCTGCACTGTGCTaGCTCCACGTAATGGAGTGC +
Preference number: 4 (lower is better)
Translates to: VHRVLRGFWMVEKRKASRLSALC*LHVMEC
Trigger: GCACTCCATTACGTGGAGGCAGCACAGTGCAGACAG...CCTGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTCTTAATACCCTGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp ATTTCAGCACCAACCCTATGGATAAGTGGACCTCCCCACACAGTTCTGGTCCCCTCCAGCAGAACAGAGTaGTGTAACAGGGTTGATGTG +
Preference number: 4 (lower is better)
Translates to: ISAPTLWISGPPHTVLVPSSRTE*CNRVDV
Trigger: CACATCAACCCTGTTACAGCACTCTGTTCTGCTGGA...GGGGACCAGAACTGTGTGGGGAGGTCCACTTATCCATAGGGTTGGTGCTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp GTTAGTGTCCGAGTTGTAGGGATGTGGAAGGAACTAGGTGCAGCAACAACGATTTTTCGGTCTCCCACCTaGTTGTTCAGGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: VSVRVVGMWKELGAATTIFRSPT*LFRAWT
Trigger: TGTCCAGGCCCTGAACAACCAGGTGGGAGACCGAAA...AATCGTTGTTGCTGCACCTAGTTCCTTCCACATCCCTACAACTCGGACACTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp AGAGAGATAGACATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATATGTTGGCGTTGGCCATaGCACACATCATGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: REIDILNLAAAGVKLLVICWRWP*HTSWPH
Trigger: GTGCGGCCATGATGTGTGCCATGGCCAACGCCAACA...TATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGATGTCTATCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR TCA 90 bp GTACACAGGGTATTAAGAGGGTTTTGGATGGTGGAAAAGAGGAAGGCTTCCAGGACTTTCTTGGCCAGCTaGCGTGTTCGATCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: VHRVLRGFWMVEKRKASRTFLAS*RVRSAS
Trigger: AGAGGCAGATCGAACACGTCAGCTGGCCAAGAAAGT...CCTGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTCTTAATACCCTGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR TCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTCTGTCTCAGCAAGCGTaGGCTCAGGTCTCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLLSQQA*AQVSPA
Trigger: GGCGGGGGAGACCTGAGCTCACGCTTGCTGAGACAG...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR TCA 90 bp GTACACAGGGTATTAAGAGGGTTTTGGATGGTGGAAAAGAGGAAGGCTTCCAGGGGCATAATCCTGCTGTaGCTTCTGTCTCAGCAAGCG +
Preference number: 4 (lower is better)
Translates to: VHRVLRGFWMVEKRKASRGIILL*LLSQQA
Trigger: CGCTTGCTGAGACAGAAGTCACAGCAGGATTATGCC...CCTGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTCTTAATACCCTGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp AGGTTGGGGTCTGCACAACCTAACATTTCAGCACCAACCCTATGGATAAGTGGACTCCTTGCTTCTTTCTaGTGCTTCCCGACGCTTTCG +
Preference number: 4 (lower is better)
Translates to: RLGSAQPNISAPTLWISGLLASF*CFPTLS
Trigger: CGAAAGCGTCGGGAAGCAGCAGAAAGAAGCAAGGAG...TCCACTTATCCATAGGGTTGGTGCTGAAATGTTAGGTTGTGCAGACCCCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATCAGATGGGTGGCCTGTaGATCCATGGCGAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHQMGGL*IHGEAQ
Trigger: CTGCGCCTCGCCATGGATGCACAGGCCACCCATCTG...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATGCCTGCACAGCTGCCTaGGCTTTGTTGGCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHACTAA*ALLALA
Trigger: GGCCAACGCCAACAAAGCGCAGGCAGCTGTGCAGGC...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp AGAGAGATAGACATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATATTCCTGATGGCAGCTTaGTGCTCTGGAGTCATGCCC +
Preference number: 4 (lower is better)
Translates to: REIDILNLAAAGVKLLVIFLMAA*CSGVMP
Trigger: GGGCATGACTCCAGAGCAGCAAGCTGCCATCAGGAA...TATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGATGTCTATCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp AGAGAGATAGACATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATATGGTTGTTCAGGGCCTaGACATCCACCCCCATGACT +
Preference number: 4 (lower is better)
Translates to: REIDILNLAAAGVKLLVIWLFRA*TSTPMT
Trigger: AGTCATGGGGGTGGATGTCCAGGCCCTGAACAACCA...TATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGATGTCTATCTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp GTTAGTGTCCGAGTTGTAGGGATGTGGAAGGAACTAGGTGCAGCAACAACGATTCATACTGCACCTGGCTaGTACCATAAGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VSVRVVGMWKELGAATTIHTAPG*YHKLPP
Trigger: AGGAGGCAGCTTATGGTACCAGCCAGGTGCAGTATG...AATCGTTGTTGCTGCACCTAGTTCCTTCCACATCCCTACAACTCGGACACTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp CAACGATTTCTCAAGCGCATAACTAAAAGATGCCTCCAATGGACCTGGGTCCCAAGCCCCTTCCAGACTTaGCCTGGATCCCAAAGACTA +
Preference number: 4 (lower is better)
Translates to: QRFLKRITKRCLQWTWVPSPFQT*PGSQRL
Trigger: TAGTCTTTGGGATCCAGGCCAAGTCTGGAAGGGGCT...TGGGACCCAGGTCCATTGGAGGCATCTTTTAGTTATGCGCTTGAGAAATCGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATGCCTGGCCAGATGGGTaGCCTGTGCATCCATGGCGA +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHAWPDG*PVHPWR
Trigger: TCGCCATGGATGCACAGGCCACCCATCTGGCCAGGC...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATAGGACTCCTCCAGCCTaGCCAGATGGGTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHRTPPA*PDGWPV
Trigger: CACAGGCCACCCATCTGGCCAGGCTGGAGGAGTCCT...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGTTGATTGGTGTAGATCTTTCCCTCTCTCCATaGTTCCTCACCATCCCTCCT +
Preference number: 4 (lower is better)
Translates to: AAGVKLLVILGCRLIGVDLSLSP*FLTIPP
Trigger: AGGAGGGATGGTGAGGAACCATGGAGAGAGGGAAAG...ATCTACACCAATCAACCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp ACACTGAGCTCCTTGCTGTTCCTAAGACCTGTCAGACACTGTACTATGCAACTGGGAAGTCAGGGAGGTTaGGGTCTGCACAACCTAACA +
Preference number: 4 (lower is better)
Translates to: TLSSLLFLRPVRHCTMQLGSQGG*GLHNLT
Trigger: TGTTAGGTTGTGCAGACCCCAACCTCCCTGACTTCC...CAGTTGCATAGTACAGTGTCTGACAGGTCTTAGGAACAGCAAGGAGCTCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp GCAGAGCCATTAGGTCTGTCTGCACTGTGCTGCCTCCACGTAATGGAGTGCCAATACAACTACAATAAGTaGTCCAGCAGAACAGAGTGC +
Preference number: 4 (lower is better)
Translates to: AEPLGLSALCCLHVMECQYNYNK*SSRTEC
Trigger: GCACTCTGTTCTGCTGGACCACTTATTGTAGTTGTA...TTGGCACTCCATTACGTGGAGGCAGCACAGTGCAGACAGACCTAATGGCTCTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR TCA 90 bp GCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGTTGATTGGTGTAGATCTCGGTTCCGCACATTaGAGAATCGGTTTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: AAGVKLLVILGCRLIGVDLGSAH*RIGFVA
Trigger: AGCGACAAAACCGATTCTTCAATGTGCGGAACCGAG...ATCTACACCAATCAACCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR TCA 90 bp CAACGATTTCTCAAGCGCATAACTAAAAGATGCCTCCAATGGACCTGGGTCCCATTTCCAAGTTGTACCTaGACTGCCCCTGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: QRFLKRITKRCLQWTWVPFPSCT*TAPAAF
Trigger: GAATGCAGCAGGGGCAGTTCAGGTACAACTTGGAAA...TGGGACCCAGGTCCATTGGAGGCATCTTTTAGTTATGCGCTTGAGAAATCGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGCTCTTAGGTTGGCTCTaGATGCAACTTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRLLGWL*MQLCSW
Trigger: CCAAGAACAAAGTTGCATGCAGAGCCAACCTAAGAG...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp GTTAGTGTCCGAGTTGTAGGGATGTGGAAGGAACTAGGTGCAGCAACAACGATTGCTGGTACCATAAGCTaGCTCCTTGCTTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: VSVRVVGMWKELGAATTIAGTIS*LLASFC
Trigger: GCAGAAAGAAGCAAGGAGGCAGCTTATGGTACCAGC...AATCGTTGTTGCTGCACCTAGTTCCTTCCACATCCCTACAACTCGGACACTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp CACACTGAGCTCCTTGCTGTTCCTAAGACCTGTCAGACACTGTACTATGCAACTAAGTTGTACCTGAACTaGCCCTGCTGCATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: HTELLAVPKTCQTLYYATKLYLN*PCCILS
Trigger: GCTGAGAATGCAGCAGGGGCAGTTCAGGTACAACTT...AGTTGCATAGTACAGTGTCTGACAGGTCTTAGGAACAGCAAGGAGCTCAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp TCAGTTACTGAAGGAAGTCAGGGAGGTTGGGGTCTGCACAACCTAACATTTCAGTCATCAACCTTGGCTTaGTGTTGCTCCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SVTEGSQGGWGLHNLTFQSSTLA*CCSCCC
Trigger: GCAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGA...CTGAAATGTTAGGTTGTGCAGACCCCAACCTCCCTGACTTCCTTCAGTAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp CACACTGAGCTCCTTGCTGTTCCTAAGACCTGTCAGACACTGTACTATGCAACTTTGAACCTCAAGAACTaGTCTGACTCCGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: HTELLAVPKTCQTLYYATLNLKN*SDSAQQ
Trigger: TTGCTGGGCGGAGTCAGAGCAGTTCTTGAGGTTCAA...AGTTGCATAGTACAGTGTCTGACAGGTCTTAGGAACAGCAAGGAGCTCAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp GCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGTTGATTGGTGTAGATCTGAACTCTTCCTCTTaGCCTGAGGGGCATAATCCT +
Preference number: 4 (lower is better)
Translates to: AAGVKLLVILGCRLIGVDLNSSS*PEGHNP
Trigger: AGGATTATGCCCCTCAGGGCAAGAGGAAGAGTTCAG...ATCTACACCAATCAACCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTCAGATGGGTGGCCTGTaGATCCATGGCGAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLQMGGL*IHGEAQ
Trigger: CTGCGCCTCGCCATGGATGCACAGGCCACCCATCTG...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCCCAGCCTGCACAGCTaGCTGCGCTTTGTTGGCGTT +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSPSLHS*LRFVGV
Trigger: AACGCCAACAAAGCGCAGGCAGCTGTGCAGGCTGGG...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTAGGACTCCTCCAGCCTaGCCAGATGGGTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLRTPPA*PDGWPV
Trigger: CACAGGCCACCCATCTGGCCAGGCTGGAGGAGTCCT...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATAGCTCCAGCACTGCCTaGGCTGAGCTCATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHSSSTA*AELMVW
Trigger: CCAGACCATGAGCTCAGCCCAGGCAGTGCTGGAGCT...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGTTGATTGGTGTAGATCTCCTCTCCCTCCCTTaGCATTTATCTCCACCACTA +
Preference number: 4 (lower is better)
Translates to: AAGVKLLVILGCRLIGVDLLSLP*HLSPPL
Trigger: TAGTGGTGGAGATAAATGCCAAGGGAGGGAGAGGAG...ATCTACACCAATCAACCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp ATTTCAGCACCAACCCTATGGATAAGTGGACCTCCCCACACAGTTCTGGTCCCCAACTCCCTGTCTAGTTaGGGACACAGATCAAACATA +
Preference number: 4 (lower is better)
Translates to: ISAPTLWISGPPHTVLVPNSLSS*GHRSNI
Trigger: TATGTTTGATCTGTGTCCCCAACTAGACAGGGAGTT...GGGGACCAGAACTGTGTGGGGAGGTCCACTTATCCATAGGGTTGGTGCTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp AGGTTGGGGTCTGCACAACCTAACATTTCAGCACCAACCCTATGGATAAGTGGACGAGTTGTAGGGATGTaGAAGGAACTAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RLGSAQPNISAPTLWISGRVVGM*KELGAA
Trigger: TGCTGCACCTAGTTCCTTCCACATCCCTACAACTCG...TCCACTTATCCATAGGGTTGGTGCTGAAATGTTAGGTTGTGCAGACCCCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
3UTR CAA 72 bp CAATGGCAGGGATGTACACAGGGTATTAAGAGGGTTTaGGATGGTGGAAAAGAGGAAGGCTTCCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QWQGCTQGIKRV*DGGKEEGFQEE
Trigger: CTCTTCCTGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTCTTAATACCCTGTGTACATCCCTGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR TCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTATTCACGCCCGTTCTTaGGCTGCTGCTTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSIHARS*AAASAP
Trigger: GGGAGCAGAAGCAGCAGCTCAAGAACGGGCGTGAAT...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR TCA 90 bp GCTTCTTCTAATGGAAGAGAAGGATGTGGCCACAGACAATATCATAATAGTAGCATTCACGCCCGTTCTTaGGCTGCTGCTTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ASSNGREGCGHRQYHNSSIHARS*AAASAP
Trigger: GGGAGCAGAAGCAGCAGCTCAAGAACGGGCGTGAAT...GCTACTATTATGATATTGTCTGTGGCCACATCCTTCTCTTCCATTAGAAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR TCA 90 bp GCTTCTTCTAATGGAAGAGAAGGATGTGGCCACAGACAATATCATAATAGTAGCTCTCCCCCGCCTCCTTaGACCTCAAGAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ASSNGREGCGHRQYHNSSSPPPP*TSRTAL
Trigger: CAGAGCAGTTCTTGAGGTTCAAGGAGGCGGGGGAGA...GCTACTATTATGATATTGTCTGTGGCCACATCCTTCTCTTCCATTAGAAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR TCA 90 bp GCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGTTGATTGGTGTAGATAGTGTTTTCTCAGCCTaGCGGTGTGCTTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: AAGVKLLVILGCRLIGVDSVFSA*RCACFL
Trigger: TAAGAAGCAAGCACACCGTCAGGCTGAGAAAACACT...ATCTACACCAATCAACCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR TCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATGGCGCAGCTGGTTACTaGGCGCATCATAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHGAAGY*AHHKLP
Trigger: AGGCAGCTTATGATGCGCTCAGTAACCAGCTGCGCC...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR TCA 90 bp ACACTGAGCTCCTTGCTGTTCCTAAGACCTGTCAGACACTGTACTATGCAACTGGTAACAGGGTTGATGTaGAGGGTGAACAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: TLSSLLFLRPVRHCTMQLVTGLM*RVNSAS
Trigger: ACTTGCACTGTTCACCCTTCACATCAACCCTGTTAC...CAGTTGCATAGTACAGTGTCTGACAGGTCTTAGGAACAGCAAGGAGCTCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATCGCCCGTTCTTGAGCTaGTGCTTCTGCTCCCGAAAC +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHRPFLS*CFCSRN
Trigger: GTTTCGGGAGCAGAAGCAGCAGCTCAAGAACGGGCG...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR GCA 90 bp GTTAGTGTCCGAGTTGTAGGGATGTGGAAGGAACTAGGTGCAGCAACAACGATTTGTTGCTCCTGCTGTTaGCTTTCCAAGTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: VSVRVVGMWKELGAATTICCSCC*LSKLYL
Trigger: CAGGTACAACTTGGAAAGGCAACAGCAGGAGCAACA...AATCGTTGTTGCTGCACCTAGTTCCTTCCACATCCCTACAACTCGGACACTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp GTACACAGGGTATTAAGAGGGTTTTGGATGGTGGAAAAGAGGAAGGCTTCCAGGCGCATAACTAAAAGATaGCTCCAATGGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VHRVLRGFWMVEKRKASRRITKR*LQWTWV
Trigger: GACCCAGGTCCATTGGAGGCATCTTTTAGTTATGCG...CCTGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTCTTAATACCCTGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTGGCCTGTGCATCCATaGCGAGGCGCAGCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLWPVHP*RGAAGY
Trigger: GTAACCAGCTGCGCCTCGCCATGGATGCACAGGCCA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTCCAGCCTGGCCAGATaGGTGGCCTGTGCATCCATG +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLSSLAR*VACASM
Trigger: CATGGATGCACAGGCCACCCATCTGGCCAGGCTGGA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATCCATGGCACACATCATaGCCGCACGACAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHPWHTS*PHDRTP
Trigger: AGGAGTCCTGTCGTGCGGCCATGATGTGTGCCATGG...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTTGTTGGCGTTGGCCATaGCACACATCATGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSCWRWP*HTSWPH
Trigger: GTGCGGCCATGATGTGTGCCATGGCCAACGCCAACA...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTGCCTGCGCTTTGTTaGCGTTGGCCATGGCACACA +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSLPALC*RWPWHT
Trigger: TGTGTGCCATGGCCAACGCCAACAAAGCGCAGGCAG...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTCTCGTGCTCTGGTGCTaGATCTCCGCAAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLLVLWC*ISARLA
Trigger: GGCCAACCTTGCGGAGATCCAGCACCAGAGCACGAG...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATGGGTGTTGGGCGACCTaGGGGTTTTCAGTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHGCWAT*GFSVSR
Trigger: CCTACTGACTGAAAACCCCCAGGTCGCCCAACACCC...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATGGAGCCATAGGGTGTTaGGCGACCTGGGGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHGAIGC*ATWGFS
Trigger: TGAAAACCCCCAGGTCGCCCAACACCCTATGGCTCC...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTGGAGCCATAGGGTGTTaGGCGACCTGGGGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSGAIGC*ATWGFS
Trigger: TGAAAACCCCCAGGTCGCCCAACACCCTATGGCTCC...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp AGAGAGATAGACATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATATCATTAGCCAGCTGCTaGTTGAAGGATCCTAGACCC +
Preference number: 4 (lower is better)
Translates to: REIDILNLAAAGVKLLVISLASC*LKDPRP
Trigger: GGGTCTAGGATCCTTCAACCAGCAGCTGGCTAATGA...TATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGATGTCTATCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp AGGTTGGGGTCTGCACAACCTAACATTTCAGCACCAACCCTATGGATAAGTGGACAAGTAGATAAGACATaGTCCTTGCCCTTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RLGSAQPNISAPTLWISGQVDKT*SLPLKG
Trigger: GCCCTTCAAGGGCAAGGACCATGTCTTATCTACTTG...TCCACTTATCCATAGGGTTGGTGCTGAAATGTTAGGTTGTGCAGACCCCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp GTTAGTGTCCGAGTTGTAGGGATGTGGAAGGAACTAGGTGCAGCAACAACGATTGAGGGTTTTGGATGGTaGAAAAGAGGAAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VSVRVVGMWKELGAATTIEGFGW*KRGRLP
Trigger: TGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTC...AATCGTTGTTGCTGCACCTAGTTCCTTCCACATCCCTACAACTCGGACACTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp AAGAGCAATGGCAGGGATGTACACAGGGTATTAAGAGGGTTTTGGATGGTGGAAATCTGGCAAGAGCAATaGCAGGGATGTACACAGGGT +
Preference number: 4 (lower is better)
Translates to: KSNGRDVHRVLRGFWMVEIWQEQ*QGCTQG
Trigger: ACCCTGTGTACATCCCTGCCATTGCTCTTGCCAGAT...TTCCACCATCCAAAACCCTCTTAATACCCTGTGTACATCCCTGCCATTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR TCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCCTCAAGAACTGCTCTaGCTCCGCCCAGCAACAACT +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSPQELL*LRPATT
Trigger: AGTTGTTGCTGGGCGGAGTCAGAGCAGTTCTTGAGG...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR TCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTCTCCCCCGCCTCCTTaGACCTCAAGAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLSPPPP*TSRTAL
Trigger: CAGAGCAGTTCTTGAGGTTCAAGGAGGCGGGGGAGA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR TCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTACGGCGGCAGTTTCTaGACTCTTCCTCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHYGGSF*TLPLAL
Trigger: CAGGGCAAGAGGAAGAGTTCAGAAACTGCCGCCGTA...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR TCA 90 bp GCTTCTTCTAATGGAAGAGAAGGATGTGGCCACAGACAATATCATAATAGTAGCTACGGCGGCAGTTTCTaGACTCTTCCTCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ASSNGREGCGHRQYHNSSYGGSF*TLPLAL
Trigger: CAGGGCAAGAGGAAGAGTTCAGAAACTGCCGCCGTA...GCTACTATTATGATATTGTCTGTGGCCACATCCTTCTCTTCCATTAGAAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR TCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATCTTCCTGCTCTTTCCTaGTGGCAGCTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHLPALS*WQLAAL
Trigger: CAGAGCAGCAAGCTGCCATCAGGAAAGAGCAGGAAG...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp TGTCCGAGTTGTAGGGATGTGGAAGGAACTAGGTGCAGCAACAACGATTTCTCACTCTTAGGTTGGCTCTaGATGCAACTTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: CPSCRDVEGTRCSNNDFSLLGWL*MQLCSW
Trigger: CCAAGAACAAAGTTGCATGCAGAGCCAACCTAAGAG...TGAGAAATCGTTGTTGCTGCACCTAGTTCCTTCCACATCCCTACAACTCGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATCCGTTCTTGAGCTGCTaGTTCTGCTCCCGAAACTCC +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHPFLSC*FCSRNS
Trigger: GGAGTTTCGGGAGCAGAAGCAGCAGCTCAAGAACGG...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR GCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTCCCCAGAGAAGTACTaGAGGCTGGCTGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLSPEKY*RLAGPG
Trigger: TCCTGGTCCAGCCAGCCTGCAGTACTTCTCTGGGGA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR GCA 90 bp CTGGGTTCTAATGATACCATCGAATTAAATCCTGTCCTCAGAGAACTCCCTGTCCTGAACTCTTCCTCTTaGCCTGAGGGGCATAATCCT +
Preference number: 4 (lower is better)
Translates to: LGSNDTIELNPVLRELPVLNSSS*PEGHNP
Trigger: AGGATTATGCCCCTCAGGGCAAGAGGAAGAGTTCAG...GACAGGGAGTTCTCTGAGGACAGGATTTAATTCGATGGTATCATTAGAACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTCAGTAGGTCACTCGTaGTCTGGTGCTGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHSVGHS*SGAGSP
Trigger: CGGAGATCCAGCACCAGAGCACGAGTGACCTACTGA...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATGCTGCTCTGGAGTCATaGCCTTCCAGCAATAGGGCA +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHAALES*PSSNRA
Trigger: TGCCCTATTGCTGGAAGGGCATGACTCCAGAGCAGC...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTGATGGCAGCTTGCTaGTCTGGAGTCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSLMAAC*SGVMPF
Trigger: GAAGGGCATGACTCCAGAGCAGCAAGCTGCCATCAG...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTCCTGATGGCAGCTTaGTGCTCTGGAGTCATGCCC +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHFLMAA*CSGVMP
Trigger: GGGCATGACTCCAGAGCAGCAAGCTGCCATCAGGAA...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp GTACACAGGGTATTAAGAGGGTTTTGGATGGTGGAAAAGAGGAAGGCTTCCAGGGTGGAAGGAACTAGGTaGAGCAACAACGATTTCTCA +
Preference number: 4 (lower is better)
Translates to: VHRVLRGFWMVEKRKASRVEGTR*SNNDFS
Trigger: TGAGAAATCGTTGTTGCTGCACCTAGTTCCTTCCAC...CCTGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTCTTAATACCCTGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTTGGTTGTTCAGGGCCTaGACATCCACCCCCATGACT +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSWLFRA*TSTPMT
Trigger: AGTCATGGGGGTGGATGTCCAGGCCCTGAACAACCA...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTTTTCGGTCTCCCACCTaGTTGTTCAGGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSFRSPT*LFRAWT
Trigger: TGTCCAGGCCCTGAACAACCAGGTGGGAGACCGAAA...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTCGGTCTCCCACCTaGTTGTTCAGGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHFRSPT*LFRAWT
Trigger: TGTCCAGGCCCTGAACAACCAGGTGGGAGACCGAAA...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp CTGGGTTCTAATGATACCATCGAATTAAATCCTGTCCTCAGAGAACTCCCTGTCACTCCTGGACTTTCTTaGCCAGCTGACGTGTTCGAT +
Preference number: 4 (lower is better)
Translates to: LGSNDTIELNPVLRELPVTPGLS*PADVFD
Trigger: ATCGAACACGTCAGCTGGCCAAGAAAGTCCAGGAGT...GACAGGGAGTTCTCTGAGGACAGGATTTAATTCGATGGTATCATTAGAACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTCTGCCTGCGCTTTGTTaGCGTTGGCCATGGCACACA +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLLPALC*RWPWHT
Trigger: TGTGTGCCATGGCCAACGCCAACAAAGCGCAGGCAG...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTAGGTCACTCGTGCTCTaGTGCTGGATCTCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLRSLVL*CWISAR
Trigger: CCTTGCGGAGATCCAGCACCAGAGCACGAGTGACCT...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTGGGTGTTGGGCGACCTaGGGGTTTTCAGTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLGCWAT*GFSVSR
Trigger: CCTACTGACTGAAAACCCCCAGGTCGCCCAACACCC...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTGGCAGCTTGCTGCTCTaGAGTCATGCCCTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLGSLLL*SHALPA
Trigger: TGCTGGAAGGGCATGACTCCAGAGCAGCAAGCTGCC...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR TCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATACTTTCTTGGCCAGCTaGCGTGTTCGATCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHTFLAS*RVRSAS
Trigger: AGAGGCAGATCGAACACGTCAGCTGGCCAAGAAAGT...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR TCA 90 bp AGAGAGATAGACATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATAGATCCTAGACCCCTTTaGAATACAGCACACAATTCC +
Preference number: 4 (lower is better)
Translates to: REIDILNLAAAGVKLLVIDPRPL*NTAHNS
Trigger: GGAATTGTGTGCTGTATTTCAAAGGGGTCTAGGATC...TATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGATGTCTATCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR TCA 90 bp CTGGGTTCTAATGATACCATCGAATTAAATCCTGTCCTCAGAGAACTCCCTGTCTACACTGTCAGTTACTaGAGGAAGTCAGGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LGSNDTIELNPVLRELPVYTVSY*RKSGRL
Trigger: CAACCTCCCTGACTTCCTTCAGTAACTGACAGTGTA...GACAGGGAGTTCTCTGAGGACAGGATTTAATTCGATGGTATCATTAGAACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp CATTTCATATCTCTGAATCTCAGTCTAAGGGCCATGTGCTGGGTTCTAATGATACTTGCTTCTTTCTGCTaGTTCCCGACGCTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: HFISLNLSLRAMCWVLMILASFC*FPTLSV
Trigger: GACCGAAAGCGTCGGGAAGCAGCAGAAAGAAGCAAG...TATCATTAGAACCCAGCACATGGCCCTTAGACTGAGATTCAGAGATATGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTCCTTGCTTCTTTCTaGTGCTTCCCGACGCTTTCG +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSLLASF*CFPTLS
Trigger: CGAAAGCGTCGGGAAGCAGCAGAAAGAAGCAAGGAG...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTCACTCGTGCTCTGGTaGTGGATCTCCGCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLSLVLW*WISARL
Trigger: CAACCTTGCGGAGATCCAGCACCAGAGCACGAGTGA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATCTCAGCCTGACGGTGTaGTTGCTTCTTAGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHLSLTV*LLLRAL
Trigger: CAACGCTCTAAGAAGCAAGCACACCGTCAGGCTGAG...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTCAGCCTGACGGTGTaGTTGCTTCTTAGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSLSLTV*LLLRAL
Trigger: CAACGCTCTAAGAAGCAAGCACACCGTCAGGCTGAG...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp CTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAATGTTTAGCCATTAGGTCTGTCTaGACTGTGCTGCCTCCACGT +
Preference number: 4 (lower is better)
Translates to: LIQPFVQQVLCLCVYECLAIRSV*TVLPPR
Trigger: ACGTGGAGGCAGCACAGTGCAGACAGACCTAATGGC...TAAACATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp AGAGAGATAGACATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATAATGCAACTTTGTTCTTaGGTTACGGCGGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: REIDILNLAAAGVKLLVIMQLCS*VTAAVS
Trigger: AGAAACTGCCGCCGTAACCCAAGAACAAAGTTGCAT...TATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGATGTCTATCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATAGCCCCTTCCAGACTTaGCCTGGATCCCAAAGACTA +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHSPFQT*PGSQRL
Trigger: TAGTCTTTGGGATCCAGGCCAAGTCTGGAAGGGGCT...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTATGGCGAGGCGCAGCTaGTTACTGAGCGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLMARRS*LLSASV
Trigger: TACAGATGCGCTCAGTAACCAGCTGCGCCTCGCCAT...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTGGATCTCCGCAAGGTTaGCCTTCTGTTCACGCTGAC +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLGSPQG*PSVHAD
Trigger: GTCAGCGTGAACAGAAGGCCAACCTTGCGGAGATCC...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GTTAGTGTCCGAGTTGTAGGGATGTGGAAGGAACTAGGTGCAGCAACAACGATTTATGCAACTGGGAGATaGGTAGACATGAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: VSVRVVGMWKELGAATTIYATGR*VDMKEM
Trigger: CATCTCTTTCATGTCTACCCATCTCCCAGTTGCATA...AATCGTTGTTGCTGCACCTAGTTCCTTCCACATCCCTACAACTCGGACACTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR TCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTCGGTTCCGCACATTaGAGAATCGGTTTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSLGSAH*RIGFVA
Trigger: AGCGACAAAACCGATTCTTCAATGTGCGGAACCGAG...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR TCA 90 bp CATTCCTGTTTCACTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTCTCGGTTCCGCACATTaGAGAATCGGTTTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: HSCFTHPAICSASFVFVCLGSAH*RIGFVA
Trigger: AGCGACAAAACCGATTCTTCAATGTGCGGAACCGAG...ACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAGTGAAACAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR TCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTCCAAGTTGTACCTaGACTGCCCCTGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHFPSCT*TAPAAF
Trigger: GAATGCAGCAGGGGCAGTTCAGGTACAACTTGGAAA...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR TCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTGGCATAATCCTGCTGTaGCTTCTGTCTCAGCAAGCG +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLGIILL*LLSQQA
Trigger: CGCTTGCTGAGACAGAAGTCACAGCAGGATTATGCC...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTCTTGCTTCTTTCTGCTaGTTCCCGACGCTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLLASFC*FPTLSV
Trigger: GACCGAAAGCGTCGGGAAGCAGCAGAAAGAAGCAAG...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTCTCCTTGCTTCTTTCTaGTGCTTCCCGACGCTTTCG +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLLLASF*CFPTLS
Trigger: CGAAAGCGTCGGGAAGCAGCAGAAAGAAGCAAGGAG...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATGCTGGTACCATAAGCTaGCTCCTTGCTTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHAGTIS*LLASFC
Trigger: GCAGAAAGAAGCAAGGAGGCAGCTTATGGTACCAGC...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR GCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTTGAGCTGCTGCTTCTaGTCCCGAAACTCCTGGACT +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLLSCCF*SRNSWT
Trigger: AGTCCAGGAGTTTCGGGAGCAGAAGCAGCAGCTCAA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR GCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTCATCAACCTTGGCTTaGTGTTGCTCCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHSSTLA*CCSCCC
Trigger: GCAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGA...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTTTGAACCTCAAGAACTaGTCTGACTCCGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSLNLKN*SDSAQQ
Trigger: TTGCTGGGCGGAGTCAGAGCAGTTCTTGAGGTTCAA...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATCTGAACTCTTCCTCTTaGCCTGAGGGGCATAATCCT +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHLNSSS*PEGHNP
Trigger: AGGATTATGCCCCTCAGGGCAAGAGGAAGAGTTCAG...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTGAGCGTTGTACTTCCTaGTCTTTCCTGATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSERCTS*SFLMAA
Trigger: AGCTGCCATCAGGAAAGAGCAGGAAGTACAACGCTC...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCACAATTCCCTCTCCTaGTCTTCTAGCTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSHNSLS*SSSSST
Trigger: AGTGCTGGAGCTAGAAGAGCAGGAGAGGGAATTGTG...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTCCTGCTGGGCTTTTTaGTCATTAGCCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLSCWAF*SLASCW
Trigger: CCAGCAGCTGGCTAATGAGCAAAAAGCCCAGCAGGA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTGAGCGCATCATAAGCTaGCTCCTTGCTTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSERIIS*LLASFC
Trigger: GCAGAAAGAAGCAAGGAGGCAGCTTATGATGCGCTC...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTACTCACTGGGCTTTTTaGTCATTAGCCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSTHWAF*SLASCW
Trigger: CCAGCAGCTGGCTAATGAGCAAAAAGCCCAGTGAGT...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTAGGTCTCAGCTGACATaGTTTCCCTCTCTCCATGGT +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSRSQLT*FPSLHG
Trigger: ACCATGGAGAGAGGGAAAGCATGTCAGCTGAGACCT...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTCATACTGCACCTGGCTaGTACCATAAGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLHTAPG*YHKLPP
Trigger: AGGAGGCAGCTTATGGTACCAGCCAGGTGCAGTATG...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATACTCCTGGACTTTCTTaGCCAGCTGACGTGTTCGAT +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHTPGLS*PADVFD
Trigger: ATCGAACACGTCAGCTGGCCAAGAAAGTCCAGGAGT...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CCA 90 bp CTGGGTTCTAATGATACCATCGAATTAAATCCTGTCCTCAGAGAACTCCCTGTCGTAACTAAGATAGGTTaGAAGCCCCTTCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: LGSNDTIELNPVLRELPVVTKIG*KPLPDL
Trigger: CAAGTCTGGAAGGGGCTTCCAACCTATCTTAGTTAC...GACAGGGAGTTCTCTGAGGACAGGATTTAATTCGATGGTATCATTAGAACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATGTACTGCAGGCTGGCTaGACCAGGATAGGTATTACT +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHVLQAG*TRIGIT
Trigger: AGTAATACCTATCCTGGTCCAGCCAGCCTGCAGTAC...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CCA 90 bp GCTTCTTCTAATGGAAGAGAAGGATGTGGCCACAGACAATATCATAATAGTAGCGTACTGCAGGCTGGCTaGACCAGGATAGGTATTACT +
Preference number: 4 (lower is better)
Translates to: ASSNGREGCGHRQYHNSSVLQAG*TRIGIT
Trigger: AGTAATACCTATCCTGGTCCAGCCAGCCTGCAGTAC...GCTACTATTATGATATTGTCTGTGGCCACATCCTTCTCTTCCATTAGAAGAAGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTAGAAGTACTGCAGGCTaGCTGGACCAGGATAGGTAT +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSRSTAG*LDQDRY
Trigger: ATACCTATCCTGGTCCAGCCAGCCTGCAGTACTTCT...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CCA 90 bp CATTTCATATCTCTGAATCTCAGTCTAAGGGCCATGTGCTGGGTTCTAATGATAAGAAGTACTGCAGGCTaGCTGGACCAGGATAGGTAT +
Preference number: 4 (lower is better)
Translates to: HFISLNLSLRAMCWVLMIRSTAG*LDQDRY
Trigger: ATACCTATCCTGGTCCAGCCAGCCTGCAGTACTTCT...TATCATTAGAACCCAGCACATGGCCCTTAGACTGAGATTCAGAGATATGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTCATTAGCCAGCTGCTaGTTGAAGGATCCTAGACCC +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHSLASC*LKDPRP
Trigger: GGGTCTAGGATCCTTCAACCAGCAGCTGGCTAATGA...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp CTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAATGTTTATCAGCACCAACCCTATaGATAAGTGGACCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LIQPFVQQVLCLCVYECLSAPTL*ISGPPH
Trigger: GTGGGGAGGTCCACTTATCCATAGGGTTGGTGCTGA...TAAACATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR TCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTGGCGCAGCTGGTTACTaGGCGCATCTGTATAATTCT +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLGAAGY*AHLYNS
Trigger: AGAATTATACAGATGCGCTCAGTAACCAGCTGCGCC...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR TCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATAGTGTTTTCTCAGCCTaGCGGTGTGCTTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHSVFSA*RCACFL
Trigger: TAAGAAGCAAGCACACCGTCAGGCTGAGAAAACACT...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTCTAGCCTCGATGGCTaGTGCTTCCTTGGTATCTGT +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLSSLDG*CFLGIC
Trigger: ACAGATACCAAGGAAGCAGCAGCCATCGAGGCTAGA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTAAGTTGTACCTGAACTaGCCCTGCTGCATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLKLYLN*PCCILS
Trigger: GCTGAGAATGCAGCAGGGGCAGTTCAGGTACAACTT...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTTGTTGCTCCTGCTGTTaGCTTTCCAAGTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSCCSCC*LSKLYL
Trigger: CAGGTACAACTTGGAAAGGCAACAGCAGGAGCAACA...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR GCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTTGAACCTCAAGAACTaGTCTGACTCCGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLLNLKN*SDSAQQ
Trigger: TTGCTGGGCGGAGTCAGAGCAGTTCTTGAGGTTCAA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTGAGCGTTGTACTTCCTaGTCTTTCCTGATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLERCTS*SFLMAA
Trigger: AGCTGCCATCAGGAAAGAGCAGGAAGTACAACGCTC...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTTGCTCATTAGCCAGCTaGTGGTTGAAGGATCCTAGA +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSCSLAS*WLKDPR
Trigger: TCTAGGATCCTTCAACCAGCAGCTGGCTAATGAGCA...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCCACCTAGAACTCACTaGGCTTTTTGCTCATTAGCC +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSPPRTH*AFCSLA
Trigger: GGCTAATGAGCAAAAAGCCCAGTGAGTTCTAGGTGG...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414955.6
3UTR CAA 72 bp TGGCTTGCTCCATTCCTGTTTCACTCATCCAGCCATTaGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAAT +
Preference number: 4 (lower is better)
Translates to: WLAPFLFHSSSH*FSKFCVCVCTN
Trigger: ATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAGTGAAACAGGAATGGAGCAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTCTTAGGTTGGCTCTaGATGCAACTTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSLLGWL*MQLCSW
Trigger: CCAAGAACAAAGTTGCATGCAGAGCCAACCTAAGAG...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTGCTCATTAGCCAGCTaGTGGTTGAAGGATCCTAGA +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLCSLAS*WLKDPR
Trigger: TCTAGGATCCTTCAACCAGCAGCTGGCTAATGAGCA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR GCA 90 bp CATTCCTGTTTCACTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTTCAGACACTGTACTATaGAACTGGGAGATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: HSCFTHPAICSASFVFVCSDTVL*NWEMGR
Trigger: TCTACCCATCTCCCAGTTGCATAGTACAGTGTCTGA...ACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAGTGAAACAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTCCAGACTTGGCCTaGATCCCAAAGACTAAATTC +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSLPDLA*IPKTKF
Trigger: GAATTTAGTCTTTGGGATCCAGGCCAAGTCTGGAAG...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CCA 90 bp CATTTCATATCTCTGAATCTCAGTCTAAGGGCCATGTGCTGGGTTCTAATGATACTTCCAGACTTGGCCTaGATCCCAAAGACTAAATTC +
Preference number: 4 (lower is better)
Translates to: HFISLNLSLRAMCWVLMILPDLA*IPKTKF
Trigger: GAATTTAGTCTTTGGGATCCAGGCCAAGTCTGGAAG...TATCATTAGAACCCAGCACATGGCCCTTAGACTGAGATTCAGAGATATGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATGTAACTAAGATAGGTTaGAAGCCCCTTCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHVTKIG*KPLPDL
Trigger: CAAGTCTGGAAGGGGCTTCCAACCTATCTTAGTTAC...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTAATTCTCATCAACCTTaGCTTGCTGTTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSNSHQP*LAVAPA
Trigger: AGCAGGAGCAACAGCAAGCCAAGGTTGATGAGAATT...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CCA 90 bp TTCACTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAATGAATTCTCATCAACCTTaGCTTGCTGTTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: FTHPAICSASFVFVCVRMNSHQP*LAVAPA
Trigger: AGCAGGAGCAACAGCAAGCCAAGGTTGATGAGAATT...CATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp CTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAATGTTTAAACCCTATGGATAAGTaGACCTCCCCACACAGTTCT +
Preference number: 4 (lower is better)
Translates to: LIQPFVQQVLCLCVYECLNPMDK*TSPHSS
Trigger: AGAACTGTGTGGGGAGGTCCACTTATCCATAGGGTT...TAAACATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR TCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTGATCCTAGACCCCTTTaGAATACAGCACACAATTCC +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLDPRPL*NTAHNS
Trigger: GGAATTGTGTGCTGTATTTCAAAGGGGTCTAGGATC...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR TCA 90 bp CATTTCATATCTCTGAATCTCAGTCTAAGGGCCATGTGCTGGGTTCTAATGATATCATCTTCAGTAGGCTaGCATTTTAGGGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: HFISLNLSLRAMCWVLMISSSVG*HFREKT
Trigger: TGTCTTCTCCCTAAAATGTCAGCCTACTGAAGATGA...TATCATTAGAACCCAGCACATGGCCCTTAGACTGAGATTCAGAGATATGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CCA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTATGCAACTTTGTTCTTaGGTTACGGCGGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLMQLCS*VTAAVS
Trigger: AGAAACTGCCGCCGTAACCCAAGAACAAAGTTGCAT...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTTTGAAGCTCTTAGGTTaGCTCTGCATGCAACTTTGT +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSLKLLG*LCMQLC
Trigger: ACAAAGTTGCATGCAGAGCCAACCTAAGAGCTTCAA...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTGAAGCTCTTAGGTTaGCTCTGCATGCAACTTTGT +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHLKLLG*LCMQLC
Trigger: ACAAAGTTGCATGCAGAGCCAACCTAAGAGCTTCAA...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR TCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTATTGGTGTAGATTACTaGATTCAGGTAATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSIGVDY*IQVILL
Trigger: CAGCAGGATTACCTGAATTCAGTAATCTACACCAAT...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR TCA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATATTGGTGTAGATTACTaGATTCAGGTAATCCTGCCT +
Preference number: 4 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHIGVDY*IQVILP
Trigger: AGGCAGGATTACCTGAATTCAGTAATCTACACCAAT...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CCA 90 bp TTCACTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAATGGTATTAAGAGGGTTTTaGATGGTGGAAAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: FTHPAICSASFVFVCVRMVLRGF*MVEKRK
Trigger: CTTCCTCTTTTCCACCATCCAAAACCCTCTTAATAC...CATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR GCA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTGGACTTGATTTTGAGTaGAGAACTTTATTACCTAGG +
Preference number: 4 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSGLDFE*RTLLPR
Trigger: CCTAGGTAATAAAGTTCTGCACTCAAAATCAAGTCC...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR GCA 90 bp CATTCCTGTTTCACTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTAAGGGAAAATTCATTTaGCCAAACCAGCTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: HSCFTHPAICSASFVFVCKGKFI*PNQLVS
Trigger: ACTTACTAGCTGGTTTGGGCAAATGAATTTTCCCTT...ACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAGTGAAACAGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS GCA 90 bp GGCCGCACGACAGGACTCCTCCAGCCTGGCCAGATGGGTGGCCTGTaGATCCATGGCGAGGCGCAGCTGGTTACTGAGCGCATCATAAGC +
Preference number: 5 (lower is better)
Translates to: GRTTGLLQPGQMGGL*IHGEAQLVTERIIS
Trigger: GCTTATGATGCGCTCAGTAACCAGCTGCGCCTCGCCATGGATGCACAGGCCACCCATCTGGCCAGGCTGGAGGAGTCCTGTCGTGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS GCA 90 bp GGCCGCACGACAGGACTCCTCCAGCCTGGCCAGATGGGTGGCCTGTaGATCCATGGCGAGGCGCAGCTGGTTACTGAGCGCATCTGTATA +
Preference number: 5 (lower is better)
Translates to: GRTTGLLQPGQMGGL*IHGEAQLVTERICI
Trigger: TATACAGATGCGCTCAGTAACCAGCTGCGCCTCGCCATGGATGCACAGGCCACCCATCTGGCCAGGCTGGAGGAGTCCTGTCGTGCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS TCA 90 bp GTGAGCTCAGGTCTCCCCCGCCTCCTTGAACCTCAAGAACTGCTCTaGCTCCGCCCAGCAACAACTCCTCCGGGGATCTGGTCCGCAGGA +
Preference number: 5 (lower is better)
Translates to: VSSGLPRLLEPQELL*LRPATTPPGIWSAG
Trigger: TCCTGCGGACCAGATCCCCGGAGGAGTTGTTGCTGGGCGGAGTCAGAGCAGTTCTTGAGGTTCAAGGAGGCGGGGGAGACCTGAGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS TCA 90 bp GACTTCTGTCTCAGCAAGCGTGAGCTCAGGTCTCCCCCGCCTCCTTaGACCTCAAGAACTGCTCTGACTCCGCCCAGCAACAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: DFCLSKRELRSPPPP*TSRTALTPPSNNSS
Trigger: GGAGGAGTTGTTGCTGGGCGGAGTCAGAGCAGTTCTTGAGGTTCAAGGAGGCGGGGGAGACCTGAGCTCACGCTTGCTGAGACAGAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS GCA 90 bp CTGCACCTGGCTGGTACCATAAGCTGCCTCCTTGCTTCTTTCTGCTaGTTCCCGACGCTTTCGGTCTCCCACCTGGTTGTTCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LHLAGTISCLLASFC*FPTLSVSHLVVQGL
Trigger: CAGGCCCTGAACAACCAGGTGGGAGACCGAAAGCGTCGGGAAGCAGCAGAAAGAAGCAAGGAGGCAGCTTATGGTACCAGCCAGGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
CDS CCA 90 bp AGAGCGTTGTACTTCCTGCTCTTTCCTGATGGCAGCTTGCTGCTCTaGAGTCATGCCCTTCCAGCAATAGGGCAGGACCCGGTAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RALYFLLFPDGSLLL*SHALPAIGQDPVGS
Trigger: GCTCCCTACCGGGTCCTGCCCTATTGCTGGAAGGGCATGACTCCAGAGCAGCAAGCTGCCATCAGGAAAGAGCAGGAAGTACAACGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS GCA 90 bp CTGGTTACTGAGCGCATCATAAGCTGCCTCCTTGCTTCTTTCTGCTaGTTCCCGACGCTTTCGGTCTCCCACCTGGTTGTTCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LVTERIISCLLASFC*FPTLSVSHLVVQGL
Trigger: CAGGCCCTGAACAACCAGGTGGGAGACCGAAAGCGTCGGGAAGCAGCAGAAAGAAGCAAGGAGGCAGCTTATGATGCGCTCAGTAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CAA 90 bp GCAGAGCCATTAGGTCTGTCTGCACTGTGCTGCCTCCACGTAATGGAGTGCCAAGTCTCCCCCGCCTCCTaGAACCTCAAGAACTGCTCT +
Preference number: 5 (lower is better)
Translates to: AEPLGLSALCCLHVMECQVSPAS*NLKNCS
Trigger: AGAGCAGTTCTTGAGGTTCAAGGAGGCGGGGGAGAC...TTGGCACTCCATTACGTGGAGGCAGCACAGTGCAGACAGACCTAATGGCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGGCTGCCTGCGCTTTGTaGGCGTTGGCCATGGCACAC +
Preference number: 5 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRAACAL*ALAMAH
Trigger: GTGTGCCATGGCCAACGCCAACAAAGCGCAGGCAGC...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS TCA 90 bp CCTTGGCTTGCTGTTGCTCCTGCTGTTGCCTTTCCAAGTTGTACCTaGACTGCCCCTGCTGCATTCTCAGCCGTGTGTCCCTGTCTAGGT +
Preference number: 5 (lower is better)
Translates to: PWLAVAPAVAFPSCT*TAPAAFSAVCPCLG
Trigger: ACCTAGACAGGGACACACGGCTGAGAATGCAGCAGGGGCAGTTCAGGTACAACTTGGAAAGGCAACAGCAGGAGCAACAGCAAGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
ENST00000490702.1
CDS-3UTR CAA 90 bp GCACCAACCCTATGGATAAGTGGACCTCCCCACACAGTTCTGGTCCCCTGGCTGCATGCAACTTTGTTCTaGGGTTACGGCGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: APTLWISGPPHTVLVPWLHATLF*GYGGSF
Trigger: GAAACTGCCGCCGTAACCCAAGAACAAAGTTGCATG...CAGCCAGGGGACCAGAACTGTGTGGGGAGGTCCACTTATCCATAGGGTTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp GCACCAACCCTATGGATAAGTGGACCTCCCCACACAGTTCTGGTCCCCTGGCTGACTCGGTTCCGCACATaGAAGAATCGGTTTTGTCGC +
Preference number: 5 (lower is better)
Translates to: APTLWISGPPHTVLVPWLTRFRT*KNRFCR
Trigger: GCGACAAAACCGATTCTTCAATGTGCGGAACCGAGT...CAGCCAGGGGACCAGAACTGTGTGGGGAGGTCCACTTATCCATAGGGTTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS TCA 90 bp AGCTGCTGCTTCTGCTCCCGAAACTCCTGGACTTTCTTGGCCAGCTaGCGTGTTCGATCTGCCTCTTCCTTCTCTAACATCTGGACTACC +
Preference number: 5 (lower is better)
Translates to: SCCFCSRNSWTFLAS*RVRSASSFSNIWTT
Trigger: GGTAGTCCAGATGTTAGAGAAGGAAGAGGCAGATCGAACACGTCAGCTGGCCAAGAAAGTCCAGGAGTTTCGGGAGCAGAAGCAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
CDS-3UTR CAA 90 bp AGAGAGATAGACATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACGGTCTCCCACCTGGTaGTTCAGGGCCTGGACATCC +
Preference number: 5 (lower is better)
Translates to: REIDILNLAAAGVKLLVIRSPTW*FRAWTS
Trigger: GGATGTCCAGGCCCTGAACAACCAGGTGGGAGACCG...TATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGATGTCTATCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CAA 90 bp AGAGAGATAGACATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATAGGGAGCCATAGGGTGTaGGGCGACCTGGGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: REIDILNLAAAGVKLLVIGSHRV*GDLGVF
Trigger: GAAAACCCCCAGGTCGCCCAACACCCTATGGCTCCC...TATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGATGTCTATCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CAA 90 bp ATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGCCTCCTCTCCCTCCCTaGGCATTTATCTCCACCACT +
Preference number: 5 (lower is better)
Translates to: ILNLAAAGVKLLVILGCRPPLPP*AFISTT
Trigger: AGTGGTGGAGATAAATGCCAAGGGAGGGAGAGGAGG...CCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CAA 90 bp GCAGAGCCATTAGGTCTGTCTGCACTGTGCTGCCTCCACGTAATGGAGTGCCAAATGGCTGCTGCTTCCTaGGTATCTGTTGACTGTTTT +
Preference number: 5 (lower is better)
Translates to: AEPLGLSALCCLHVMECQMAAAS*VSVDCF
Trigger: AAAACAGTCAACAGATACCAAGGAAGCAGCAGCCAT...TTGGCACTCCATTACGTGGAGGCAGCACAGTGCAGACAGACCTAATGGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp AGAGAGATAGACATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATAGTCTCCCCCGCCTCCTaGAACCTCAAGAACTGCTCT +
Preference number: 5 (lower is better)
Translates to: REIDILNLAAAGVKLLVIVSPAS*NLKNCS
Trigger: AGAGCAGTTCTTGAGGTTCAAGGAGGCGGGGGAGAC...TATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGATGTCTATCTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CAA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATCGGTCTCCCACCTGGTaGTTCAGGGCCTGGACATCC +
Preference number: 5 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHRSPTW*FRAWTS
Trigger: GGATGTCCAGGCCCTGAACAACCAGGTGGGAGACCG...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp TTCACTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAATGCGGTCTCCCACCTGGTaGTTCAGGGCCTGGACATCC +
Preference number: 5 (lower is better)
Translates to: FTHPAICSASFVFVCVRMRSPTW*FRAWTS
Trigger: GGATGTCCAGGCCCTGAACAACCAGGTGGGAGACCG...CATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp GTACACAGGGTATTAAGAGGGTTTTGGATGGTGGAAAAGAGGAAGGCTTCCAGGCTCATCAACCTTGGCTaGCTGTTGCTCCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: VHRVLRGFWMVEKRKASRLINLG*LLLLLL
Trigger: CAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGAG...CCTGGAAGCCTTCCTCTTTTCCACCATCCAAAACCCTCTTAATACCCTGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTGCTGCCTGCGCTTTGTaGGCGTTGGCCATGGCACAC +
Preference number: 5 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSAACAL*ALAMAH
Trigger: GTGTGCCATGGCCAACGCCAACAAAGCGCAGGCAGC...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATGGGAGCCATAGGGTGTaGGGCGACCTGGGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHGSHRV*GDLGVF
Trigger: GAAAACCCCCAGGTCGCCCAACACCCTATGGCTCCC...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS GCA 90 bp CTGGCTTTTCCATTCAGTATCCAGTGTTTTCTCAGCCTGACGGTGTaGTTGCTTCTTAGAGCGTTGTACTTCCTGCTCTTTCCTGATGGC +
Preference number: 5 (lower is better)
Translates to: LAFPFSIQCFLSLTV*LLLRALYFLLFPDG
Trigger: GCCATCAGGAAAGAGCAGGAAGTACAACGCTCTAAGAAGCAAGCACACCGTCAGGCTGAGAAAACACTGGATACTGAATGGAAAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp GCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGTTGATTGGTGTAGATCATGCAACTTTGTTCTaGGGTTACGGCGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: AAGVKLLVILGCRLIGVDHATLF*GYGGSF
Trigger: GAAACTGCCGCCGTAACCCAAGAACAAAGTTGCATG...ATCTACACCAATCAACCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CAA 90 bp CTGGGTTCTAATGATACCATCGAATTAAATCCTGTCCTCAGAGAACTCCCTGTCGCTCTGCATGCAACTTaGTTCTTGGGTTACGGCGGC +
Preference number: 5 (lower is better)
Translates to: LGSNDTIELNPVLRELPVALHAT*FLGYGG
Trigger: GCCGCCGTAACCCAAGAACAAAGTTGCATGCAGAGC...GACAGGGAGTTCTCTGAGGACAGGATTTAATTCGATGGTATCATTAGAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATACAGCTGCCTGCGCTTaGTTGGCGTTGGCCATGGCA +
Preference number: 5 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHTAACA*LALAMA
Trigger: TGCCATGGCCAACGCCAACAAAGCGCAGGCAGCTGT...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTACAGCTGCCTGCGCTTaGTTGGCGTTGGCCATGGCA +
Preference number: 5 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSTAACA*LALAMA
Trigger: TGCCATGGCCAACGCCAACAAAGCGCAGGCAGCTGT...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp AGAGAGATAGACATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATAAGCCTGACGGTGTGCTaGCTTCTTAGAGCGTTGTAC +
Preference number: 5 (lower is better)
Translates to: REIDILNLAAAGVKLLVISLTVC*LLRALY
Trigger: GTACAACGCTCTAAGAAGCAAGCACACCGTCAGGCT...TATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGATGTCTATCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CAA 90 bp AGAGAGATAGACATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATATTAGCCAGCTGCTGGTaGAAGGATCCTAGACCCCTT +
Preference number: 5 (lower is better)
Translates to: REIDILNLAAAGVKLLVILASCW*KDPRPL
Trigger: AAGGGGTCTAGGATCCTTCAACCAGCAGCTGGCTAA...TATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGATGTCTATCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CAA 90 bp TGTCCGAGTTGTAGGGATGTGGAAGGAACTAGGTGCAGCAACAACGATTTCTCAGATAAGACATGGTCCTaGCCCTTGAAGGGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CPSCRDVEGTRCSNNDFSDKTWS*PLKGFF
Trigger: GAAGAAGCCCTTCAAGGGCAAGGACCATGTCTTATC...TGAGAAATCGTTGTTGCTGCACCTAGTTCCTTCCACATCCCTACAACTCGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS TCA 90 bp CTCATGGTCTGGCTTTTCCATTCAGTATCCAGTGTTTTCTCAGCCTaGCGGTGTGCTTGCTTCTTAGAGCGTTGTACTTCCTGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LMVWLFHSVSSVFSA*RCACFLERCTSCSF
Trigger: GAAAGAGCAGGAAGTACAACGCTCTAAGAAGCAAGCACACCGTCAGGCTGAGAAAACACTGGATACTGAATGGAAAAGCCAGACCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS CCA 90 bp CCGATTTTGAAGCTCTTAGGTTGGCTCTGCATGCAACTTTGTTCTTaGGTTACGGCGGCAGTTTCTGAACTCTCAAGAACTGCTCTGACT +
Preference number: 5 (lower is better)
Translates to: PILKLLGWLCMQLCS*VTAAVSELSRTALT
Trigger: AGTCAGAGCAGTTCTTGAGAGTTCAGAAACTGCCGCCGTAACCCAAGAACAAAGTTGCATGCAGAGCCAACCTAAGAGCTTCAAAATCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329209.9
CDS CCA 90 bp ATTACTGTAACTAAGATAGGTTGGAAGCCCCTTCCAGACTTGGCCTaGATCCCAAAGACTAAATTCACGCCCGTTCTTGAGCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: ITVTKIGWKPLPDLA*IPKTKFTPVLELLL
Trigger: AAGCAGCAGCTCAAGAACGGGCGTGAATTTAGTCTTTGGGATCCAGGCCAAGTCTGGAAGGGGCTTCCAACCTATCTTAGTTACAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
CDS-3UTR CAA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTGTCTCCCCCGCCTCCTaGAACCTCAAGAACTGCTCT +
Preference number: 5 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSVSPAS*NLKNCS
Trigger: AGAGCAGTTCTTGAGGTTCAAGGAGGCGGGGGAGAC...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp AGAGAGATAGACATCCTGAACTTAGCGGCTGCTGGTGTTAAACTGCTGGTGATAAACTCACTGGGCTTTTaGCTCATTAGCCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: REIDILNLAAAGVKLLVINSLGF*LISQLL
Trigger: CAGCAGCTGGCTAATGAGCAAAAAGCCCAGTGAGTT...TATCACCAGCAGTTTAACACCAGCAGCCGCTAAGTTCAGGATGTCTATCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CAA 90 bp CATTTCATATCTCTGAATCTCAGTCTAAGGGCCATGTGCTGGGTTCTAATGATAAAGCCCCTTCCAGACTaGGCCTGGATCCCAAAGACT +
Preference number: 5 (lower is better)
Translates to: HFISLNLSLRAMCWVLMIKPLPD*AWIPKT
Trigger: AGTCTTTGGGATCCAGGCCAAGTCTGGAAGGGGCTT...TATCATTAGAACCCAGCACATGGCCCTTAGACTGAGATTCAGAGATATGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTTTTCCTGATGGCAGCTaGCTGCTCTGGAGTCATGCC +
Preference number: 5 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSFPDGS*LLWSHA
Trigger: GGCATGACTCCAGAGCAGCAAGCTGCCATCAGGAAA...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp GCTGCTGGTGTTAAACTGCTGGTGATACTGGGCTGTAGGTTGATTGGTGTAGATTTGCTTCTTAGAGCGTaGTACTTCCTGCTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: AAGVKLLVILGCRLIGVDLLLRA*YFLLFP
Trigger: AGGAAAGAGCAGGAAGTACAACGCTCTAAGAAGCAA...ATCTACACCAATCAACCTACAGCCCAGTATCACCAGCAGTTTAACACCAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS-3UTR CAA 90 bp TTCACTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAATGAGGAAGTCAGGGAGGTaGGGGTCTGCACAACCTAAC +
Preference number: 5 (lower is better)
Translates to: FTHPAICSASFVFVCVRMRKSGR*GSAQPN
Trigger: GTTAGGTTGTGCAGACCCCAACCTCCCTGACTTCCT...CATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTGCTCTGCATGCAACTTaGTTCTTGGGTTACGGCGGC +
Preference number: 5 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLALHAT*FLGYGG
Trigger: GCCGCCGTAACCCAAGAACAAAGTTGCATGCAGAGC...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTAAGCCCCTTCCAGACTaGGCCTGGATCCCAAAGACT +
Preference number: 5 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLKPLPD*AWIPKT
Trigger: AGTCTTTGGGATCCAGGCCAAGTCTGGAAGGGGCTT...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CAA 90 bp GCTTCTTCTAATGGAAGAGAAGGATGTGGCCACAGACAATATCATAATAGTAGCTGTTGCCTTTCCAAGTaGTACCTGAACTGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: ASSNGREGCGHRQYHNSSCCLSK*YLNCPC
Trigger: GCAGGGGCAGTTCAGGTACAACTTGGAAAGGCAACA...GCTACTATTATGATATTGTCTGTGGCCACATCCTTCTCTTCCATTAGAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATAACCTTGGCTTGCTGTaGCTCCTGCTGTTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHNLGLL*LLLLPF
Trigger: GAAAGGCAACAGCAGGAGCAACAGCAAGCCAAGGTT...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CAA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTCATCAACCTTGGCTaGCTGTTGCTCCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSLINLG*LLLLLL
Trigger: CAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGAG...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CAA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTTTCCTGATGGCAGCTaGCTGCTCTGGAGTCATGCC +
Preference number: 5 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLFPDGS*LLWSHA
Trigger: GGCATGACTCCAGAGCAGCAAGCTGCCATCAGGAAA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTAGCCTGACGGTGTGCTaGCTTCTTAGAGCGTTGTAC +
Preference number: 5 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSSLTVC*LLRALY
Trigger: GTACAACGCTCTAAGAAGCAAGCACACCGTCAGGCT...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTATCCTGCTGGGCTTTTaGCTCATTAGCCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSILLGF*LISQLL
Trigger: CAGCAGCTGGCTAATGAGCAAAAAGCCCAGCAGGAT...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CAA 90 bp GTTAGTGTCCGAGTTGTAGGGATGTGGAAGGAACTAGGTGCAGCAACAACGATTCACTCATCCAGCCATTaGTTCAGCAAGTTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: VSVRVVGMWKELGAATTIHSSSH*FSKFCV
Trigger: AACACAAAACTTGCTGAACAAATGGCTGGATGAGTG...AATCGTTGTTGCTGCACCTAGTTCCTTCCACATCCCTACAACTCGGACACTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTACTCGGTTCCGCACATaGAAGAATCGGTTTTGTCGC +
Preference number: 5 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSTRFRT*KNRFCR
Trigger: GCGACAAAACCGATTCTTCAATGTGCGGAACCGAGT...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATACTCGGTTCCGCACATaGAAGAATCGGTTTTGTCGC +
Preference number: 5 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHTRFRT*KNRFCR
Trigger: GCGACAAAACCGATTCTTCAATGTGCGGAACCGAGT...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTGTTGCCTTTCCAAGTaGTACCTGAACTGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLCCLSK*YLNCPC
Trigger: GCAGGGGCAGTTCAGGTACAACTTGGAAAGGCAACA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS-3UTR CAA 90 bp CTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAATGTTTAAACCTTGGCTTGCTGTaGCTCCTGCTGTTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: LIQPFVQQVLCLCVYECLNLGLL*LLLLPF
Trigger: GAAAGGCAACAGCAGGAGCAACAGCAAGCCAAGGTT...TAAACATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTTAGCCAGCTGCTGGTaGAAGGATCCTAGACCCCTT +
Preference number: 5 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLLASCW*KDPRPL
Trigger: AAGGGGTCTAGGATCCTTCAACCAGCAGCTGGCTAA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTCATGCAACTTTGTTCTaGGGTTACGGCGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLHATLF*GYGGSF
Trigger: GAAACTGCCGCCGTAACCCAAGAACAAAGTTGCATG...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp CAACGATTTCTCAAGCGCATAACTAAAAGATGCCTCCAATGGACCTGGGTCCCAATTGAAGAATCGGTTTaGTCGCTCTTTTTCTCGATT +
Preference number: 5 (lower is better)
Translates to: QRFLKRITKRCLQWTWVPIEESV*SLFFSI
Trigger: AATCGAGAAAAAGAGCGACAAAACCGATTCTTCAAT...TGGGACCCAGGTCCATTGGAGGCATCTTTTAGTTATGCGCTTGAGAAATCGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp TCAGTTACTGAAGGAAGTCAGGGAGGTTGGGGTCTGCACAACCTAACATTTCAGCTGAGCTGTGTGATTTaGGGTAAATCATTTCATATC +
Preference number: 5 (lower is better)
Translates to: SVTEGSQGGWGLHNLTFQLSCVI*GKSFHI
Trigger: GATATGAAATGATTTACCCAAAATCACACAGCTCAG...CTGAAATGTTAGGTTGTGCAGACCCCAACCTCCCTGACTTCCTTCAGTAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTTTTGAAGCTCTTAGGTaGGCTCTGCATGCAACTTTG +
Preference number: 5 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSFEALR*ALHATL
Trigger: CAAAGTTGCATGCAGAGCCAACCTAAGAGCTTCAAA...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTGAAGCTCTTAGGTaGGCTCTGCATGCAACTTTG +
Preference number: 5 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHFEALR*ALHATL
Trigger: CAAAGTTGCATGCAGAGCCAACCTAAGAGCTTCAAA...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp GAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTATGGCTGCTGCTTCCTaGGTATCTGTTGACTGTTTT +
Preference number: 5 (lower is better)
Translates to: ECRTLLPRLEGGSMQHFSMAAAS*VSVDCF
Trigger: AAAACAGTCAACAGATACCAAGGAAGCAGCAGCCAT...AGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATATGGCTGCTGCTTCCTaGGTATCTGTTGACTGTTTT +
Preference number: 5 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHMAAAS*VSVDCF
Trigger: AAAACAGTCAACAGATACCAAGGAAGCAGCAGCCAT...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp ATAACTAAAAGATGCCTCCAATGGACCTGGGTCCCAATGTCAGTTCTGCTGCTTCAGCAAGTTTTGTGTTaGTGTGTGTACGAATGTTTA +
Preference number: 5 (lower is better)
Translates to: ITKRCLQWTWVPMSVLLLQQVLC*CVYECL
Trigger: TAAACATTCGTACACACACAAACACAAAACTTGCTG...AAGCAGCAGAACTGACATTGGGACCCAGGTCCATTGGAGGCATCTTTTAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp CTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAATGTTTATTTGAAGCTCTTAGGTaGGCTCTGCATGCAACTTTG +
Preference number: 5 (lower is better)
Translates to: LIQPFVQQVLCLCVYECLFEALR*ALHATL
Trigger: CAAAGTTGCATGCAGAGCCAACCTAAGAGCTTCAAA...TAAACATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTTTGCTTCTTAGAGCGTaGTACTTCCTGCTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLLLLRA*YFLLFP
Trigger: AGGAAAGAGCAGGAAGTACAACGCTCTAAGAAGCAA...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp GCTTCTTCTAATGGAAGAGAAGGATGTGGCCACAGACAATATCATAATAGTAGCGAAGGGAAAATTCATTaGCCCAAACCAGCTAGTAAG +
Preference number: 5 (lower is better)
Translates to: ASSNGREGCGHRQYHNSSEGKIH*PKPASK
Trigger: CTTACTAGCTGGTTTGGGCAAATGAATTTTCCCTTC...GCTACTATTATGATATTGTCTGTGGCCACATCCTTCTCTTCCATTAGAAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp CTCATCCAGCCATTTGTTCAGCAAGTTTTGTGTTTGTGTGTGTACGAATGTTTAGGTATTAAGAGGGTTTaGGATGGTGGAAAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: LIQPFVQQVLCLCVYECLGIKRV*DGGKEE
Trigger: TTCCTCTTTTCCACCATCCAAAACCCTCTTAATACC...TAAACATTCGTACACACACAAACACAAAACTTGCTGAACAAATGGCTGGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS-3UTR CAA 90 bp GATTTTGAGTGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATATTGAAGAATCGGTTTaGTCGCTCTTTTTCTCGATT +
Preference number: 5 (lower is better)
Translates to: DFECRTLLPRLEGGSMQHIEESV*SLFFSI
Trigger: AATCGAGAAAAAGAGCGACAAAACCGATTCTTCAAT...ATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCACTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS-3UTR CAA 90 bp TGCAGAACTTTATTACCTAGGTTAGAAGGTGGGAGTATGCAGCATTTTTCTCTTATTGAAGAATCGGTTTaGTCGCTCTTTTTCTCGATT +
Preference number: 5 (lower is better)
Translates to: CRTLLPRLEGGSMQHFSLIEESV*SLFFSI
Trigger: AATCGAGAAAAAGAGCGACAAAACCGATTCTTCAAT...AAGAGAAAAATGCTGCATACTCCCACCTTCTAACCTAGGTAATAAAGTTCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS CCA 72 bp CCGCACGACAGGACTCCTCCAGCCTGGCCAGATGGGTaGCCTGTGCATCCATGGCGAGGCGCAGCTGGTTAC +
Preference number: 6 (lower is better)
Translates to: PHDRTPPAWPDG*PVHPWRGAAGY
Trigger: GTAACCAGCTGCGCCTCGCCATGGATGCACAGGCCACCCATCTGGCCAGGCTGGAGGAGTCCTGTCGTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS GCA 72 bp ACAGGACTCCTCCAGCCTGGCCAGATGGGTGGCCTGTaGATCCATGGCGAGGCGCAGCTGGTTACTGAGCGC +
Preference number: 6 (lower is better)
Translates to: TGLLQPGQMGGL*IHGEAQLVTER
Trigger: GCGCTCAGTAACCAGCTGCGCCTCGCCATGGATGCACAGGCCACCCATCTGGCCAGGCTGGAGGAGTCCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS CCA 72 bp CACACATCATGGCCGCACGACAGGACTCCTCCAGCCTaGCCAGATGGGTGGCCTGTGCATCCATGGCGAGGC +
Preference number: 6 (lower is better)
Translates to: HTSWPHDRTPPA*PDGWPVHPWRG
Trigger: GCCTCGCCATGGATGCACAGGCCACCCATCTGGCCAGGCTGGAGGAGTCCTGTCGTGCGGCCATGATGTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS CCA 72 bp GCCCAGCCTGCACAGCTGCCTGCGCTTTGTTGGCGTTaGCCATGGCACACATCATGGCCGCACGACAGGACT +
Preference number: 6 (lower is better)
Translates to: AQPAQLPALCWR*PWHTSWPHDRT
Trigger: AGTCCTGTCGTGCGGCCATGATGTGTGCCATGGCCAACGCCAACAAAGCGCAGGCAGCTGTGCAGGCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS TCA 72 bp GGTCTCCCCCGCCTCCTTGAACCTCAAGAACTGCTCTaGCTCCGCCCAGCAACAACTCCTCCGGGGATCTGG +
Preference number: 6 (lower is better)
Translates to: GLPRLLEPQELL*LRPATTPPGIW
Trigger: CCAGATCCCCGGAGGAGTTGTTGCTGGGCGGAGTCAGAGCAGTTCTTGAGGTTCAAGGAGGCGGGGGAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS GCA 72 bp GCTCAGGTCTCCCCCGCCTCCTTGAACCTCAAGAACTaGTCTGACTCCGCCCAGCAACAACTCCTCCGGGGA +
Preference number: 6 (lower is better)
Translates to: AQVSPASLNLKN*SDSAQQQLLRG
Trigger: TCCCCGGAGGAGTTGTTGCTGGGCGGAGTCAGAGCAGTTCTTGAGGTTCAAGGAGGCGGGGGAGACCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS CCA 72 bp CCTGCGCTTTGTTGGCGTTGGCCATGGCACACATCATaGCCGCACGACAGGACTCCTCCAGCCTGGCCAGAT +
Preference number: 6 (lower is better)
Translates to: PALCWRWPWHTS*PHDRTPPAWPD
Trigger: ATCTGGCCAGGCTGGAGGAGTCCTGTCGTGCGGCCATGATGTGTGCCATGGCCAACGCCAACAAAGCGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS CCA 72 bp CCTGCACAGCTGCCTGCGCTTTGTTGGCGTTGGCCATaGCACACATCATGGCCGCACGACAGGACTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PAQLPALCWRWP*HTSWPHDRTPP
Trigger: TGGAGGAGTCCTGTCGTGCGGCCATGATGTGTGCCATGGCCAACGCCAACAAAGCGCAGGCAGCTGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS CCA 72 bp GGTCACTCGTGCTCTGGTGCTGGATCTCCGCAAGGTTaGCCTTCTGTTCACGCTGACGCTCACAGCGCTGAC +
Preference number: 6 (lower is better)
Translates to: GHSCSGAGSPQG*PSVHADAHSAD
Trigger: GTCAGCGCTGTGAGCGTCAGCGTGAACAGAAGGCCAACCTTGCGGAGATCCAGCACCAGAGCACGAGTGACC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS GCA 72 bp TGGGGGTTTTCAGTCAGTAGGTCACTCGTGCTCTGGTaGTGGATCTCCGCAAGGTTGGCCTTCTGTTCACGC +
Preference number: 6 (lower is better)
Translates to: WGFSVSRSLVLW*WISARLAFCSR
Trigger: GCGTGAACAGAAGGCCAACCTTGCGGAGATCCAGCACCAGAGCACGAGTGACCTACTGACTGAAAACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS CCA 72 bp TACTTCCTGCTCTTTCCTGATGGCAGCTTGCTGCTCTaGAGTCATGCCCTTCCAGCAATAGGGCAGGACCCG +
Preference number: 6 (lower is better)
Translates to: YFLLFPDGSLLL*SHALPAIGQDP
Trigger: CGGGTCCTGCCCTATTGCTGGAAGGGCATGACTCCAGAGCAGCAAGCTGCCATCAGGAAAGAGCAGGAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS GCA 72 bp TGCTCCTGCTGTTGCCTTTCCAAGTTGTACCTGAACTaGCCCTGCTGCATTCTCAGCCGTGTGTCCCTGTCT +
Preference number: 6 (lower is better)
Translates to: CSCCCLSKLYLN*PCCILSRVSLS
Trigger: AGACAGGGACACACGGCTGAGAATGCAGCAGGGGCAGTTCAGGTACAACTTGGAAAGGCAACAGCAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
ENST00000490702.1
CDS CCA 72 bp GCTGCTGCTTCTGCTCCCGAAACTCCTGGACTTTCTTaGCCAGCTGACGTGTTCGATCTGCCTCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: AAASAPETPGLS*PADVFDLPLPS
Trigger: AGAAGGAAGAGGCAGATCGAACACGTCAGCTGGCCAAGAAAGTCCAGGAGTTTCGGGAGCAGAAGCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
CDS CAA 90 bp TTGCTTCTTAGAGCGTTGTACTTCCTGCTCTTTCCTGATGGCAGCTaGCTGCTCTGGAGTCATGCCCTTCCAGCAATAGGGCAGGACCCG +
Preference number: 6 (lower is better)
Translates to: LLLRALYFLLFPDGS*LLWSHALPAIGQDP
Trigger: CGGGTCCTGCCCTATTGCTGGAAGGGCATGACTCCAGAGCAGCAAGCTGCCATCAGGAAAGAGCAGGAAGTACAACGCTCTAAGAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS CAA 72 bp TGGCCTGGATCCCAAAGACTAAATTCACGCCCGTTCTaGAGCTGCTGCTTCTGCTCCCGAAACTCCTGGACT +
Preference number: 6 (lower is better)
Translates to: WPGSQRLNSRPF*SCCFCSRNSWT
Trigger: AGTCCAGGAGTTTCGGGAGCAGAAGCAGCAGCTCAAGAACGGGCGTGAATTTAGTCTTTGGGATCCAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
CDS CAA 90 bp TTCCAGACTTGGCCTGGATCCCAAAGACTAAATTCACGCCCGTTCTaGAGCTGCTGCTTCTGCTCCCGAAACTCCTGGACTTTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: FQTWPGSQRLNSRPF*SCCFCSRNSWTFLA
Trigger: GGCCAAGAAAGTCCAGGAGTTTCGGGAGCAGAAGCAGCAGCTCAAGAACGGGCGTGAATTTAGTCTTTGGGATCCAGGCCAAGTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
CDS GCA 72 bp TCCCAAAGACTAAATTCACGCCCGTTCTTGAGCTGCTaGTTCTGCTCCCGAAACTCCTGGACTTTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SQRLNSRPFLSC*FCSRNSWTFLA
Trigger: GGCCAAGAAAGTCCAGGAGTTTCGGGAGCAGAAGCAGCAGCTCAAGAACGGGCGTGAATTTAGTCTTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
CDS CAA 90 bp GCCGGGCTGCTTACCTGTATAATTCTCATCAACCTTGGCTTGCTGTaGCTCCTGCTGTTGCCTTTCCAAGTTGTACCTGAACTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: AGLLTCIILINLGLL*LLLLPFQVVPELPL
Trigger: CAGGGGCAGTTCAGGTACAACTTGGAAAGGCAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGAGAATTATACAGGTAAGCAGCCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS CAA 90 bp GACATCCACCCCCATGACTCGGTTCCGCACATTGAAGAATCGGTTTaGTCGCTCTTTTTCTCGATTTCTTCTAGCCTCGATGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: DIHPHDSVPHIEESV*SLFFSISSSLDGCC
Trigger: GCAGCAGCCATCGAGGCTAGAAGAAATCGAGAAAAAGAGCGACAAAACCGATTCTTCAATGTGCGGAACCGAGTCATGGGGGTGGATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000414955.6
ENST00000457095.5
CDS CAA 90 bp TGGAGGGCCGGGCTGCTTACCTGTATAATTCTCATCAACCTTGGCTaGCTGTTGCTCCTGCTGTTGCCTTTCCAAGTTGTACCTGAACTG +
Preference number: 6 (lower is better)
Translates to: WRAGLLTCIILINLG*LLLLLLPFQVVPEL
Trigger: CAGTTCAGGTACAACTTGGAAAGGCAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGAGAATTATACAGGTAAGCAGCCCGGCCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS TCA 72 bp TTCTGCTCCCGAAACTCCTGGACTTTCTTGGCCAGCTaGCGTGTTCGATCTGCCTCTTCCTTCTCTAACATC +
Preference number: 6 (lower is better)
Translates to: FCSRNSWTFLAS*RVRSASSFSNI
Trigger: GATGTTAGAGAAGGAAGAGGCAGATCGAACACGTCAGCTGGCCAAGAAAGTCCAGGAGTTTCGGGAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
CDS GCA 72 bp GGATCCCAAAGACTAAATTCACGCCCGTTCTTGAGCTaGTGCTTCTGCTCCCGAAACTCCTGGACTTTCTTG +
Preference number: 6 (lower is better)
Translates to: GSQRLNSRPFLS*CFCSRNSWTFL
Trigger: CAAGAAAGTCCAGGAGTTTCGGGAGCAGAAGCAGCAGCTCAAGAACGGGCGTGAATTTAGTCTTTGGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
CDS GCA 72 bp TCTCCACCACTACCACCTAGAACTCACTGGGCTTTTTaGTCATTAGCCAGCTGCTGGTTGAAGGATCCTAGA +
Preference number: 6 (lower is better)
Translates to: SPPLPPRTHWAF*SLASCWLKDPR
Trigger: TCTAGGATCCTTCAACCAGCAGCTGGCTAATGAGCAAAAAGCCCAGTGAGTTCTAGGTGGTAGTGGTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS CCA 72 bp ACTAAGATAGGTTGGAAGCCCCTTCCAGACTTGGCCTaGATCCCAAAGACTAAATTCACGCCCGTTCTTGAG +
Preference number: 6 (lower is better)
Translates to: TKIGWKPLPDLA*IPKTKFTPVLE
Trigger: CTCAAGAACGGGCGTGAATTTAGTCTTTGGGATCCAGGCCAAGTCTGGAAGGGGCTTCCAACCTATCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
CDS CAA 90 bp GTTACTGAGCGCATCTGTATAATTCTCATCAACCTTGGCTTGCTGTaGCTCCTGCTGTTGCCTTTCCAAGTTGTACCTGAACTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: VTERICIILINLGLL*LLLLPFQVVPELPL
Trigger: CAGGGGCAGTTCAGGTACAACTTGGAAAGGCAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGAGAATTATACAGATGCGCTCAGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS CAA 90 bp GCTTTTCCATTCAGTATCCAGTGTTTTCTCAGCCTGACGGTGTGCTaGCTTCTTAGAGCGTTGTACTTCCTGCTCTTTCCTGATGGCAGC +
Preference number: 6 (lower is better)
Translates to: AFPFSIQCFLSLTVC*LLRALYFLLFPDGS
Trigger: GCTGCCATCAGGAAAGAGCAGGAAGTACAACGCTCTAAGAAGCAAGCACACCGTCAGGCTGAGAAAACACTGGATACTGAATGGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS CCA 72 bp TGGACCAGGATAGGTATTACTGTAACTAAGATAGGTTaGAAGCCCCTTCCAGACTTGGCCTGGATCCCAAAG +
Preference number: 6 (lower is better)
Translates to: WTRIGITVTKIG*KPLPDLAWIPK
Trigger: CTTTGGGATCCAGGCCAAGTCTGGAAGGGGCTTCCAACCTATCTTAGTTACAGTAATACCTATCCTGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
CDS CCA 72 bp AAGCTCTTAGGTTGGCTCTGCATGCAACTTTGTTCTTaGGTTACGGCGGCAGTTTCTGAACTCTTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: KLLGWLCMQLCS*VTAAVSELFLL
Trigger: CAAGAGGAAGAGTTCAGAAACTGCCGCCGTAACCCAAGAACAAAGTTGCATGCAGAGCCAACCTAAGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375327.6
ENST00000414955.6
ENST00000457095.5
CDS CCA 72 bp TGGCATTTATCTCCACCACTACCACCTAGAACTCACTaGGCTTTTTGCTCATTAGCCAGCTGCTGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: WHLSPPLPPRTH*AFCSLASCWLK
Trigger: CTTCAACCAGCAGCTGGCTAATGAGCAAAAAGCCCAGTGAGTTCTAGGTGGTAGTGGTGGAGATAAATGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414955.6
CDS CAA 72 bp ACTGTAACTAAGATAGGTTGGAAGCCCCTTCCAGACTaGGCCTGGATCCCAAAGACTAAATTCACGCCCGTT +
Preference number: 6 (lower is better)
Translates to: TVTKIGWKPLPD*AWIPKTKFTPV
Trigger: AACGGGCGTGAATTTAGTCTTTGGGATCCAGGCCAAGTCTGGAAGGGGCTTCCAACCTATCTTAGTTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
CDS CAA 90 bp CAGCTGGTTACTGAGCGCATCTGTATAATTCTCATCAACCTTGGCTaGCTGTTGCTCCTGCTGTTGCCTTTCCAAGTTGTACCTGAACTG +
Preference number: 6 (lower is better)
Translates to: QLVTERICIILINLG*LLLLLLPFQVVPEL
Trigger: CAGTTCAGGTACAACTTGGAAAGGCAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGAGAATTATACAGATGCGCTCAGTAACCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS CAA 90 bp TCATCTTCAGTAGGCTGTATAATTCTCATCAACCTTGGCTTGCTGTaGCTCCTGCTGTTGCCTTTCCAAGTTGTACCTGAACTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: SSSVGCIILINLGLL*LLLLPFQVVPELPL
Trigger: CAGGGGCAGTTCAGGTACAACTTGGAAAGGCAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGAGAATTATACAGCCTACTGAAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490702.1
CDS CAA 90 bp ATAGGTATTACTGTAACTAAGATAGGTTGGAAGCCCCTTCCAGACTaGGCCTGGATCCCAAAGACTAAATTCACGCCCGTTCTTGAGCTG +
Preference number: 6 (lower is better)
Translates to: IGITVTKIGWKPLPD*AWIPKTKFTPVLEL
Trigger: CAGCTCAAGAACGGGCGTGAATTTAGTCTTTGGGATCCAGGCCAAGTCTGGAAGGGGCTTCCAACCTATCTTAGTTACAGTAATACCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000457095.5
CDS TCA 72 bp TGGCTTTTCCATTCAGTATCCAGTGTTTTCTCAGCCTaGCGGTGTGCTTGCTTCTTAGAGCGTTGTACTTCC +
Preference number: 6 (lower is better)
Translates to: WLFHSVSSVFSA*RCACFLERCTS
Trigger: GGAAGTACAACGCTCTAAGAAGCAAGCACACCGTCAGGCTGAGAAAACACTGGATACTGAATGGAAAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS GCA 72 bp CCATTCAGTATCCAGTGTTTTCTCAGCCTGACGGTGTaGTTGCTTCTTAGAGCGTTGTACTTCCTGCTCTTT +
Preference number: 6 (lower is better)
Translates to: PFSIQCFLSLTV*LLLRALYFLLF
Trigger: AAAGAGCAGGAAGTACAACGCTCTAAGAAGCAAGCACACCGTCAGGCTGAGAAAACACTGGATACTGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS CCA 72 bp AAGCTCTTAGGTTGGCTCTGCATGCAACTTTGTTCTTaGGTTACGGCGGCAGTTTCTGAACTCTCAAGAACT +
Preference number: 6 (lower is better)
Translates to: KLLGWLCMQLCS*VTAAVSELSRT
Trigger: AGTTCTTGAGAGTTCAGAAACTGCCGCCGTAACCCAAGAACAAAGTTGCATGCAGAGCCAACCTAAGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329209.9
CDS CAA 72 bp TTCAGTATCCAGTGTTTTCTCAGCCTGACGGTGTGCTaGCTTCTTAGAGCGTTGTACTTCCTGCTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: FSIQCFLSLTVC*LLRALYFLLFP
Trigger: AGGAAAGAGCAGGAAGTACAACGCTCTAAGAAGCAAGCACACCGTCAGGCTGAGAAAACACTGGATACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375327.6
ENST00000414955.6
CDS CAA 72 bp GGGCTGCTTACCTGTATAATTCTCATCAACCTTGGCTaGCTGTTGCTCCTGCTGTTGCCTTTCCAAGTTGTA +
Preference number: 6 (lower is better)
Translates to: GLLTCIILINLG*LLLLLLPFQVV
Trigger: TACAACTTGGAAAGGCAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGAGAATTATACAGGTAAGCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457095.5
CDS CAA 90 bp GATGGTTCATCTTCAGTAGGCTGTATAATTCTCATCAACCTTGGCTaGCTGTTGCTCCTGCTGTTGCCTTTCCAAGTTGTACCTGAACTG +
Preference number: 6 (lower is better)
Translates to: DGSSSVGCIILINLG*LLLLLLPFQVVPEL
Trigger: CAGTTCAGGTACAACTTGGAAAGGCAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGAGAATTATACAGCCTACTGAAGATGAACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490702.1
CDS CAA 72 bp TTCTCAGTAAGGAATCCCGATTTTGAAGCTCTTAGGTaGGCTCTGCATGCAACTTTGTTCTTGGGTTACGGC +
Preference number: 6 (lower is better)
Translates to: FSVRNPDFEALR*ALHATLFLGYG
Trigger: GCCGTAACCCAAGAACAAAGTTGCATGCAGAGCCAACCTAAGAGCTTCAAAATCGGGATTCCTTACTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000414955.6
ENST00000457095.5
CDS CAA 72 bp ACTGAGCGCATCTGTATAATTCTCATCAACCTTGGCTaGCTGTTGCTCCTGCTGTTGCCTTTCCAAGTTGTA +
Preference number: 6 (lower is better)
Translates to: TERICIILINLG*LLLLLLPFQVV
Trigger: TACAACTTGGAAAGGCAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGAGAATTATACAGATGCGCTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS CAA 90 bp TATACATCTTTCTCAGTAAGGAATCCCGATTTTGAAGCTCTTAGGTaGGCTCTGCATGCAACTTTGTTCTTGGGTTACGGCGGCAGTTTC +
Preference number: 6 (lower is better)
Translates to: YTSFSVRNPDFEALR*ALHATLFLGYGGSF
Trigger: GAAACTGCCGCCGTAACCCAAGAACAAAGTTGCATGCAGAGCCAACCTAAGAGCTTCAAAATCGGGATTCCTTACTGAGAAAGATGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000414955.6
ENST00000457095.5
CDS CAA 72 bp TCTTCAGTAGGCTGTATAATTCTCATCAACCTTGGCTaGCTGTTGCTCCTGCTGTTGCCTTTCCAAGTTGTA +
Preference number: 6 (lower is better)
Translates to: SSVGCIILINLG*LLLLLLPFQVV
Trigger: TACAACTTGGAAAGGCAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGAGAATTATACAGCCTACTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490702.1
CDS TCA 72 bp GTGATACTGGGCTGTAGGTTGATTGGTGTAGATTACTaGATTCAGGTAATCCTGCTGGGCTTTTTGCTCATT +
Preference number: 6 (lower is better)
Translates to: VILGCRLIGVDY*IQVILLGFLLI
Trigger: AATGAGCAAAAAGCCCAGCAGGATTACCTGAATTCAGTAATCTACACCAATCAACCTACAGCCCAGTATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375327.6
CDS CAA 72 bp TCTCGATTTCTTCTAGCCTCGATGGCTGCTGCTTCCTaGGTATCTGTTGACTGTTTTATGTTATACATCTTT +
Preference number: 6 (lower is better)
Translates to: SRFLLASMAAAS*VSVDCFMLYIF
Trigger: AAAGATGTATAACATAAAACAGTCAACAGATACCAAGGAAGCAGCAGCCATCGAGGCTAGAAGAAATCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329209.9
ENST00000375327.6
ENST00000414955.6
ENST00000457095.5