Pregenerated sensors for RHPN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000131941

Ensembl transcript IDs: ENST00000254260.8, ENST00000588388.5

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 72 bp	AGCTCTTTGATTCTGCAATTTACTCCGGCCGGTTTGTaGAAGGGGATTACAGCCCTTCCGAAAGTAGCCGTC	+
Preference number: 6 (lower is better) Translates to: SSLILQFTPAGL*KGITALPKVAV Trigger: GACGGCTACTTTCGGAAGGGCTGTAATCCCCTTGCACAAACCGGCCGGAGTAAATTGCAGAATCAAAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254260.8 ENST00000588388.5
CDS CAA 72 bp	AGCAGCTCTTTGATTCTGCAATTTACTCCGGCCGGTTaGTGCAAGGGGATTACAGCCCTTCCGAAAGTAGCC	+
Preference number: 6 (lower is better) Translates to: SSSLILQFTPAG*CKGITALPKVA Trigger: GGCTACTTTCGGAAGGGCTGTAATCCCCTTGCACAAACCGGCCGGAGTAAATTGCAGAATCAAAGAGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254260.8 ENST00000588388.5
CDS CAA 90 bp	CCTCATCCGCACGGCTTTCAGGATCTGCTGATTCAAAGCAGCTCTTaGATTCTGCAATTTACTCCGGCCGGTTTGTGCAAGGGGATTACA	+
Preference number: 6 (lower is better) Translates to: PHPHGFQDLLIQSSS*ILQFTPAGLCKGIT Trigger: TGTAATCCCCTTGCACAAACCGGCCGGAGTAAATTGCAGAATCAAAGAGCTGCTTTGAATCAGCAGATCCTGAAAGCCGTGCGGATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254260.8 ENST00000588388.5

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu