RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RHPN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000158106

Ensembl transcript IDs: ENST00000289013.11, ENST00000522335.5, ENST00000522899.1

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCTGCAGGGAATGACTCCCGCTGGCCCTGTCTCTTCCGGAACCTaGCAGGCCCTGGGGCCCTCGGTGGGGGCCTCCGCTCCGGCTCCG +
Preference number: 1 (lower is better)
Translates to: WLQGMTPAGPVSSGT*QALGPSVGASAPAP
Trigger: CGGAGCCGGAGCGGAGGCCCCCACCGAGGGCCCCAGGGCCTGGCAGGTTCCGGAAGAGACAGGGCCAGCGGGAGTCATTCCCTGCAGCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CCA 90 bp GCGGGTGGCGGCTGCCCCCTAGTGGCTGCAGGGAATGACTCCCGCTaGCCCTGTCTCTTCCGGAACCTGCCAGGCCCTGGGGCCCTCGGT +
Preference number: 1 (lower is better)
Translates to: AGGGCPLVAAGNDSR*PCLFRNLPGPGALG
Trigger: ACCGAGGGCCCCAGGGCCTGGCAGGTTCCGGAAGAGACAGGGCCAGCGGGAGTCATTCCCTGCAGCCACTAGGGGGCAGCCGCCACCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR TCA 90 bp GGGCTGCTGAGCGGGTGGCGGCTGCCCCCTAGTGGCTGCAGGGAATaGCTCCCGCTGGCCCTGTCTCTTCCGGAACCTGCCAGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: GLLSGWRLPPSGCRE*LPLALSLPEPARPW
Trigger: CCAGGGCCTGGCAGGTTCCGGAAGAGACAGGGCCAGCGGGAGTCATTCCCTGCAGCCACTAGGGGGCAGCCGCCACCCGCTCAGCAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CCA 90 bp GCAGCCTCCAGCATGAGGCGGGACAGGCATTGCCCGGAGGTCCTCTaGGTGGGGAGGGCATGCTCGGTGCTTGCTGCCAGCTGGAGCCAG +
Preference number: 1 (lower is better)
Translates to: AASSMRRDRHCPEVL*VGRACSVLAASWSQ
Trigger: CTGGCTCCAGCTGGCAGCAAGCACCGAGCATGCCCTCCCCACCCAGAGGACCTCCGGGCAATGCCTGTCCCGCCTCATGCTGGAGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR GCA 90 bp CAGGGCCCTGGACCCTGGAACCAGAGCCTGGGATGCAGGGCAGGCTaGTCTCACCTGCGGACCCTCGGAAGGGACTGGACAAGAGGGCAG +
Preference number: 1 (lower is better)
Translates to: QGPGPWNQSLGCRAG*SHLRTLGRDWTRGQ
Trigger: CTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCCCAGGCTCTGGTTCCAGGGTCCAGGGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CCA 90 bp GGATGCAGGGCAGGCTGCTCTCACCTGCGGACCCTCGGAAGGGACTaGACAAGAGGGCAGGGGTCTCGCAGAGCTGGGGGCCGCCTTTCT +
Preference number: 1 (lower is better)
Translates to: GCRAGCSHLRTLGRD*TRGQGSRRAGGRLS
Trigger: AGAAAGGCGGCCCCCAGCTCTGCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR TCA 90 bp CACCCAGTACACGGAGGCCTGGAGGCAGCCCTCACTTCCCCTGCTTaGGACACTGACAGCTCACGGCCTGTGGAGGCCAGCAGGAGCGGC +
Preference number: 1 (lower is better)
Translates to: HPVHGGLEAALTSPA*DTDSSRPVEASRSG
Trigger: GCCGCTCCTGCTGGCCTCCACAGGCCGTGAGCTGTCAGTGTCTCAAGCAGGGGAAGTGAGGGCTGCCTCCAGGCCTCCGTGTACTGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR GCA 90 bp GACCCTGGAACCAGAGCCTGGGATGCAGGGCAGGCTGCTCTCACCTaGGGACCCTCGGAAGGGACTGGACAAGAGGGCAGGGGTCTCGCA +
Preference number: 1 (lower is better)
Translates to: DPGTRAWDAGQAALT*GPSEGTGQEGRGLA
Trigger: TGCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCCCAGGCTCTGGTTCCAGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CCA 90 bp CACTGCTGTAGGGGTCCTGGAGGTGGTGTTCTTGCCGACGGCCTTTaGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGAGGCAGCCC +
Preference number: 1 (lower is better)
Translates to: HCCRGPGGGVLADGL*GPLSTQYTEAWRQP
Trigger: GGGCTGCCTCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAACACCACCTCCAGGACCCCTACAGCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CCA 90 bp CACCCTACTTGCACCCCCATTTTCTTGGCTGAAGCACGAGGGAGGTaGCAGCGCAGGGCCCTGGACCCTGGAACCAGAGCCTGGGATGCA +
Preference number: 1 (lower is better)
Translates to: HPTCTPIFLAEARGR*QRRALDPGTRAWDA
Trigger: TGCATCCCAGGCTCTGGTTCCAGGGTCCAGGGCCCTGCGCTGCCACCTCCCTCGTGCTTCAGCCAAGAAAATGGGGGTGCAAGTAGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CCA 90 bp GGGAGTCCCTTGCTCTGTGCACAGACAGGACAGCAGGAAGTATTTTaGGGGAAGGCCATGTCTGGGACCCGGCCTAGAGGTCTGCGGGTG +
Preference number: 1 (lower is better)
Translates to: GSPLLCAQTGQQEVF*GKAMSGTRPRGLRV
Trigger: CACCCGCAGACCTCTAGGCCGGGTCCCAGACATGGCCTTCCCCCAAAATACTTCCTGCTGTCCTGTCTGTGCACAGAGCAAGGGACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR GCA 90 bp CTGCCCTCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAGGCATGCTCGGTGCTTaGTGCCAGCTGGAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: LPSCPGRSRRGACVSGTPGMLGA*CQLEPG
Trigger: CCCTGGCTCCAGCTGGCAGCAAGCACCGAGCATGCC...TGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGAGGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR TCA 90 bp GGCCCTCGGTGGGGGCCTCCGCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGATGGGATGGCTGTaGGGAGCACCCTGTAAGGAG +
Preference number: 2 (lower is better)
Translates to: GPRWGPPLRLRLRGSSWVQMGWL*GAPCKE
Trigger: CTCCTTACAGGGTGCTCCTCACAGCCATCCCATCTG...CACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGCGGAGGCCCCCACCGAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCGAAGCACGAGGGAGGTaGCAGCGCAGGGCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTEARGR*QRRALD
Trigger: GTCCAGGGCCCTGCGCTGCCACCTCCCTCGTGCTTC...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR GCA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCGGAGGGCATGCTCGGTaGTTGCTGCCAGCTGGAGCC +
Preference number: 2 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTGGHAR*LLPAGA
Trigger: GGCTCCAGCTGGCAGCAAGCACCGAGCATGCCCTCC...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp GCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGCCCTGACTCTGCAGCCCGGTCTGCGGGTGCTGTaGGTGTGTCTGGCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: APAPAPWLLLGAALTLQPGLRVL*VCLAAA
Trigger: TGCAGCAGCCAGACACACCCACAGCACCCGCAGACC...GGGCTGCAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR TCA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCTCTTGGGTGCAGCCCTaGCTCTGCAGCCCTTCCCAC +
Preference number: 2 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTSWVQP*LCSPSH
Trigger: GTGGGAAGGGCTGCAGAGTCAGGGCTGCACCCAAGA...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp CCCCAGGCTCAGAGAGAAGTGACACGCCCAGGAGCTGGAGGGTGGCACCCATGCCGGAGGTCCTCTGGGTaGGGAGGGCATGCTCGGTGC +
Preference number: 2 (lower is better)
Translates to: PQAQREVTRPGAGGWHPCRRSSG*GGHARC
Trigger: GCACCGAGCATGCCCTCCCCACCCAGAGGACCTCCG...GCATGGGTGCCACCCTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR GCA 90 bp AGGCCCCAGGCTCAGAGAGAAGTGACACGCCCAGGAGCTGGAGGGTGGCACCCATGGGTGGGGAGGGCATaGTCGGTGCTTGCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: RPQAQREVTRPGAGGWHPWVGRA*SVLAAS
Trigger: GCTGGCAGCAAGCACCGAGCATGCCCTCCCCACCCA...TGGGTGCCACCCTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCTGGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR GCA 90 bp CCCCAGGCTCAGAGAGAAGTGACACGCCCAGGAGCTGGAGGGTGGCACCCATGCCCCGGCCTAGAGGTCTaGGGGTGCTGTGGGTGTGTC +
Preference number: 2 (lower is better)
Translates to: PQAQREVTRPGAGGWHPCPGLEV*GCCGCV
Trigger: GACACACCCACAGCACCCGCAGACCTCTAGGCCGGG...GCATGGGTGCCACCCTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR GCA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCAACCAGAGCCTGGGATaGAGGGCAGGCTGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTNQSLG*RAGCSH
Trigger: GTGAGAGCAGCCTGCCCTGCATCCCAGGCTCTGGTT...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CAA 90 bp AGGGGTCCTGGAGGTGGTGTTCTTGCCGACGGCCTTTGGGGGCCATaGTCCACCCAGTACACGGAGGCCTGGAGGCAGCCCTCACTTCCC +
Preference number: 2 (lower is better)
Translates to: RGPGGGVLADGLWGP*STQYTEAWRQPSLP
Trigger: GGGAAGTGAGGGCTGCCTCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAACACCACCTCCAGGACCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR TCA 90 bp GGTGTTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCGCAGCCCCAGGAAGCTaGCCTCAGACCGACAGAGGG +
Preference number: 2 (lower is better)
Translates to: GVLADGLWGPLSTQYTEAAAPGS*PQTDRG
Trigger: CCCTCTGTCGGTCTGAGGTCAGCTTCCTGGGGCTGC...GGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR GCA 90 bp TGCTCTCACCTGCGGACCCTCGGAAGGGACTGGACAAGAGGGCAGGGGTCTCGCATGCTCGGTGCTTGCTaGCAGCTGGAGCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: CSHLRTLGRDWTRGQGSRMLGAC*QLEPGL
Trigger: CAGCCCTGGCTCCAGCTGGCAGCAAGCACCGAGCAT...GCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR TCA 90 bp TTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGAAGGCAGCCTCCAGCATaGGGCGGGACAGGCATTGCC +
Preference number: 2 (lower is better)
Translates to: FLPTAFGGHCPPSTRRPGRQPPA*GGTGIA
Trigger: GGCAATGCCTGTCCCGCCTCATGCTGGAGGCTGCCT...TCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp GGTGTTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCCCAGGAGCTGGAGGGTaGCACCCATGCTCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: GVLADGLWGPLSTQYTEAPGAGG*HPCSEQ
Trigger: CTGCTCTGAGCATGGGTGCCACCCTCCAGCTCCTGG...GGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR GCA 90 bp TGCTCTCACCTGCGGACCCTCGGAAGGGACTGGACAAGAGGGCAGGGGTCTCGCAGGTGGGGAGTCCCTTaGTCTGTGCACAGACAGGAC +
Preference number: 2 (lower is better)
Translates to: CSHLRTLGRDWTRGQGSRRWGVP*SVHRQD
Trigger: GTCCTGTCTGTGCACAGAGCAAGGGACTCCCCACCT...GCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp CAGGAAGCTGACCTCAGACCGACAGAGGGACTGGCATCCTTCTGTGTGTGGGTGTGCCCGGAGGTCCTCTaGGTGGGGAGGGCATGCTCG +
Preference number: 2 (lower is better)
Translates to: QEADLRPTEGLASFCVWVCPEVL*VGRACS
Trigger: CGAGCATGCCCTCCCCACCCAGAGGACCTCCGGGCA...CACCCACACACAGAAGGATGCCAGTCCCTCTGTCGGTCTGAGGTCAGCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp TTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGACACAGGGCGCAGAGGTaGGGAGTCCCTTGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: FLPTAFGGHCPPSTRRPGHRAQR*GVPCSV
Trigger: CACAGAGCAAGGGACTCCCCACCTCTGCGCCCTGTG...TCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp CCCCAGGCTCAGAGAGAAGTGACACGCCCAGGAGCTGGAGGGTGGCACCCATGCGACACCAGGGACTCCTaGGCAAACGGGACACTTGCT +
Preference number: 2 (lower is better)
Translates to: PQAQREVTRPGAGGWHPCDTRDS*ANGTLA
Trigger: AGCAAGTGTCCCGTTTGCCCAGGAGTCCCTGGTGTC...GCATGGGTGCCACCCTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR TCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGGGCTGGAGGCAGGACTaGGACCTCAGGGTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQGWRQD*DLRVCA
Trigger: GGCACAGACCCTGAGGTCTCAGTCCTGCCTCCAGCC...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR GCA 90 bp AGAGCCTGGGATGCAGGGCAGGCTGCTCTCACCTGCGGACCCTCGGAAGGGACTGGCAAACGGGACACTTaGTGGGTTGACCAGCACAGA +
Preference number: 2 (lower is better)
Translates to: RAWDAGQAALTCGPSEGTGKRDT*WVDQHR
Trigger: TCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCC...AGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCCCAGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR GCA 90 bp TTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGAGGAGGGTGGCACCCATaGTCAGAGCAGGACAGCAAG +
Preference number: 2 (lower is better)
Translates to: FLPTAFGGHCPPSTRRPGGGWHP*SEQDSK
Trigger: CTTGCTGTCCTGCTCTGAGCATGGGTGCCACCCTCC...TCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp TTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGATGCTGTGGGTGTGTCTaGCTGCTGCATGGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: FLPTAFGGHCPPSTRRPGCCGCV*LLHGGG
Trigger: CCCTCCACCATGCAGCAGCCAGACACACCCACAGCA...TCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp GGTGTTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCAAACGGGACACTTGCTaGGTTGACCAGCACAGAGCC +
Preference number: 2 (lower is better)
Translates to: GVLADGLWGPLSTQYTEAKRDTC*VDQHRA
Trigger: GGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTT...GGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR GCA 90 bp TTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTCTCCCAAGGCGCACCTaGCCGTGCCGCCTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LLTKLTRAGETCVTLAHSLPRRT*PCRLPG
Trigger: CCCTGGGAGGCGGCACGGGCAGGTGCGCCTTGGGAG...AGAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR TCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGGGGCTCAGACAGGTCTaGCCAGTCTTTAATGGGCAG +
Preference number: 2 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQGLRQV*PVFNGQ
Trigger: CTGCCCATTAAAGACTGGTCAGACCTGTCTGAGCCC...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGGGCTGCTGAGCGGGTaGCGGCTGCCCCCTAGTGGC +
Preference number: 2 (lower is better)
Translates to: STVLLTKLTRAGETCVTLGLLSG*RLPPSG
Trigger: GCCACTAGGGGGCAGCCGCCACCCGCTCAGCAGCCC...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR GCA 90 bp TTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCAGGCGGGACAGGCATTaGCCGGAGGTCCTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: FINQINTCWGDLRDLGPFRRDRH*PEVLWV
Trigger: CACCCAGAGGACCTCCGGGCAATGCCTGTCCCGCCT...GAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR GCA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGTCTCTTCCGGAACCTaGCAGGCCCTGGGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: STVLLTKLTRAGETCVTLVSSGT*QALGPS
Trigger: CGAGGGCCCCAGGGCCTGGCAGGTTCCGGAAGAGAC...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGACAGCTCACGGCCTGTaGAGGCCAGCAGGAGCGGCC +
Preference number: 2 (lower is better)
Translates to: STVLLTKLTRAGETCVTLTAHGL*RPAGAA
Trigger: GGCCGCTCCTGCTGGCCTCCACAGGCCGTGAGCTGT...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp TTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCGCCCGGGGGTACAGATaGGATGGCTGTGAGGAGCAC +
Preference number: 2 (lower is better)
Translates to: FINQINTCWGDLRDLGPFARGYR*DGCEEH
Trigger: GTGCTCCTCACAGCCATCCCATCTGTACCCCCGGGC...GAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp TTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCCAGTACACGGAGGCCTaGAGGCAGCCCTCACTTCCC +
Preference number: 2 (lower is better)
Translates to: FINQINTCWGDLRDLGPFQYTEA*RQPSLP
Trigger: GGGAAGTGAGGGCTGCCTCCAGGCCTCCGTGTACTG...GAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp TTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCCTTGCCGACGGCCTTTaGGGGCCATTGTCCACCCAG +
Preference number: 2 (lower is better)
Translates to: FINQINTCWGDLRDLGPFLADGL*GPLSTQ
Trigger: CTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAG...GAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR GCA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGCAGGCTGCTCTCACCTaGGGACCCTCGGAAGGGACT +
Preference number: 2 (lower is better)
Translates to: STVLLTKLTRAGETCVTLQAALT*GPSEGT
Trigger: AGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTG...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp TTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTGACCGACAGAGGGACTaGCATCCTTCTGTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: LLTKLTRAGETCVTLAHSDRQRD*HPSVCG
Trigger: CCCACACACAGAAGGATGCCAGTCCCTCTGTCGGTC...AGAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGGCCACCATGAGACCTaGGCCACGACACCAGGGACT +
Preference number: 2 (lower is better)
Translates to: SLIHSFINQINTCWGDLRGHHET*ATTPGT
Trigger: AGTCCCTGGTGTCGTGGCCCAGGTCTCATGGTGGCC...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CCA 90 bp TTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCGCATCCTTCTGTGTGTaGGTGAAGAGGCCACAGCTC +
Preference number: 2 (lower is better)
Translates to: FINQINTCWGDLRDLGPFASFCV*VKRPQL
Trigger: GAGCTGTGGCCTCTTCACCCACACACAGAAGGATGC...GAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR TCA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTCCCCATTTTCTTGGCTaGAGCACGAGGGAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: SLIHSFINQINTCWGDLRPHFLG*STREVA
Trigger: TGCCACCTCCCTCGTGCTTCAGCCAAGAAAATGGGG...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR GCA 72 bp GCCCGGAGGTCCTCTGGGTGGGGAGGGCATGCTCGGTaGTTGCTGCCAGCTGGAGCCAGGGCTGAGGCGTGC +
Preference number: 3 (lower is better)
Translates to: ARRSSGWGGHAR*LLPAGARAEAC
Trigger: GCACGCCTCAGCCCTGGCTCCAGCTGGCAGCAAGCACCGAGCATGCCCTCCCCACCCAGAGGACCTCCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CAA 90 bp CTGCCCTCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCACTGGAGGTGGTGTTCTaGCCGACGGCCTTTGGGGGC +
Preference number: 3 (lower is better)
Translates to: LPSCPGRSRRGACVSGTPLEVVF*PTAFGG
Trigger: GCCCCCAAAGGCCGTCGGCAAGAACACCACCTCCAG...TGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGAGGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR GCA 72 bp CCCGAGGCAGCCTCCAGCATGAGGCGGGACAGGCATTaGCCGGAGGTCCTCTGGGTGGGGAGGGCATGCTCG +
Preference number: 3 (lower is better)
Translates to: PEAASSMRRDRH*PEVLWVGRACS
Trigger: CGAGCATGCCCTCCCCACCCAGAGGACCTCCGGGCAATGCCTGTCCCGCCTCATGCTGGAGGCTGCCTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CAA 90 bp CTGCCCTCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAGGGACACTTGCTGGGTaGACCAGCACAGAGCCCATG +
Preference number: 3 (lower is better)
Translates to: LPSCPGRSRRGACVSGTPGTLAG*TSTEPM
Trigger: CATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCC...TGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGAGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CAA 90 bp GCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGCCCTGACTCTGCAGCCCGGCCTTTGGGGGCCATaGTCCACCCAGTACACGGAG +
Preference number: 3 (lower is better)
Translates to: APAPAPWLLLGAALTLQPGLWGP*STQYTE
Trigger: CTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCC...GGGCTGCAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR TCA 72 bp AGCGGGTGGCGGCTGCCCCCTAGTGGCTGCAGGGAATaGCTCCCGCTGGCCCTGTCTCTTCCGGAACCTGCC +
Preference number: 3 (lower is better)
Translates to: SGWRLPPSGCRE*LPLALSLPEPA
Trigger: GGCAGGTTCCGGAAGAGACAGGGCCAGCGGGAGTCATTCCCTGCAGCCACTAGGGGGCAGCCGCCACCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR GCA 72 bp CTGCCCTCCTGCCCAGGAAGATCGCGCCGCGGCGCCTaGGTCTCTGGGACCCCAAACACCCTACTTGCACCC +
Preference number: 3 (lower is better)
Translates to: LPSCPGRSRRGA*VSGTPNTLLAP
Trigger: GGGTGCAAGTAGGGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGAGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CCA 72 bp GGCTGCCCCCTAGTGGCTGCAGGGAATGACTCCCGCTaGCCCTGTCTCTTCCGGAACCTGCCAGGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: GCPLVAAGNDSR*PCLFRNLPGPG
Trigger: CCCAGGGCCTGGCAGGTTCCGGAAGAGACAGGGCCAGCGGGAGTCATTCCCTGCAGCCACTAGGGGGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CCA 72 bp GCAGGCTGCTCTCACCTGCGGACCCTCGGAAGGGACTaGACAAGAGGGCAGGGGTCTCGCAGAGCTGGGGGC +
Preference number: 3 (lower is better)
Translates to: AGCSHLRTLGRD*TRGQGSRRAGG
Trigger: GCCCCCAGCTCTGCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CCA 72 bp AGCATGAGGCGGGACAGGCATTGCCCGGAGGTCCTCTaGGTGGGGAGGGCATGCTCGGTGCTTGCTGCCAGC +
Preference number: 3 (lower is better)
Translates to: SMRRDRHCPEVL*VGRACSVLAAS
Trigger: GCTGGCAGCAAGCACCGAGCATGCCCTCCCCACCCAGAGGACCTCCGGGCAATGCCTGTCCCGCCTCATGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR GCA 72 bp GGACCCTGGAACCAGAGCCTGGGATGCAGGGCAGGCTaGTCTCACCTGCGGACCCTCGGAAGGGACTGGACA +
Preference number: 3 (lower is better)
Translates to: GPWNQSLGCRAG*SHLRTLGRDWT
Trigger: TGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCCCAGGCTCTGGTTCCAGGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CCA 72 bp AGGGGTCCTGGAGGTGGTGTTCTTGCCGACGGCCTTTaGGGGCCATTGTCCACCCAGTACACGGAGGCCTGG +
Preference number: 3 (lower is better)
Translates to: RGPGGGVLADGL*GPLSTQYTEAW
Trigger: CCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAACACCACCTCCAGGACCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CCA 72 bp CACAGAGCCCATGATGACCAGCACAGGGCGCAGAGGTaGGGAGTCCCTTGCTCTGTGCACAGACAGGACAGC +
Preference number: 3 (lower is better)
Translates to: HRAHDDQHRAQR*GVPCSVHRQDS
Trigger: GCTGTCCTGTCTGTGCACAGAGCAAGGGACTCCCCACCTCTGCGCCCTGTGCTGGTCATCATGGGCTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CAA 90 bp CATTCTGCTGAGACAGGGATTTTCCCACAAGGGCAAGTGGGGGACCTGGACCCCTTCTACCCGGGGTCTTaGCCTCAGCCCTCCCAAGGC +
Preference number: 3 (lower is better)
Translates to: HSAETGIFPQGQVGDLDPFYPGS*PQPSQG
Trigger: GCCTTGGGAGGGCTGAGGCAAAGACCCCGGGTAGAA...GGGGTCCAGGTCCCCCACTTGCCCTTGTGGGAAAATCCCTGTCTCAGCAGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR GCA 72 bp CCACGACACCAGGGACTCCTGGGCAAACGGGACACTTaGTGGGTTGACCAGCACAGAGCCCATGATGACCAG +
Preference number: 3 (lower is better)
Translates to: PRHQGLLGKRDT*WVDQHRAHDDQ
Trigger: CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAGGAGTCCCTGGTGTCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CCA 72 bp CGACACCAGGGACTCCTGGGCAAACGGGACACTTGCTaGGTTGACCAGCACAGAGCCCATGATGACCAGCAC +
Preference number: 3 (lower is better)
Translates to: RHQGLLGKRDTC*VDQHRAHDDQH
Trigger: GTGCTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAGGAGTCCCTGGTGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CAA 90 bp TTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGAACAGCAGGAAGTATTTaGGGGGAAGGCCATGTCTGG +
Preference number: 3 (lower is better)
Translates to: FLPTAFGGHCPPSTRRPGTAGSI*GEGHVW
Trigger: CCAGACATGGCCTTCCCCCAAAATACTTCCTGCTGT...TCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CAA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTCCCGGCTCAGGCAGGTaGGGGAGCCCTGCCCTCCTG +
Preference number: 3 (lower is better)
Translates to: SLIHSFINQINTCWGDLRPGSGR*GSPALL
Trigger: CAGGAGGGCAGGGCTCCCCAACCTGCCTGAGCCGGG...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CAA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGGGCATGCTCGGTGCTaGCTGCCAGCTGGAGCCAGG +
Preference number: 3 (lower is better)
Translates to: SLIHSFINQINTCWGDLRGHARC*LPAGAR
Trigger: CCTGGCTCCAGCTGGCAGCAAGCACCGAGCATGCCC...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CAA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGAGGCGGGACAGGCATaGCCCGGAGGTCCTCTGGGT +
Preference number: 3 (lower is better)
Translates to: SLIHSFINQINTCWGDLREAGQA*PGGPLG
Trigger: ACCCAGAGGACCTCCGGGCAATGCCTGTCCCGCCTC...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR-3UTR CAA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGAGGTGGGGAGTCCCTaGCTCTGTGCACAGACAGGA +
Preference number: 3 (lower is better)
Translates to: SLIHSFINQINTCWGDLREVGSP*LCAQTG
Trigger: TCCTGTCTGTGCACAGAGCAAGGGACTCCCCACCTC...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp GGCCCTCGGTGGGGGCCTCCGCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCCGGCTCCGGCTCCGTaGCTCCTCTTGGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GPRWGPPLRLRLRGSSWVPAPAP*LLLGAA
Trigger: GGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGG...CACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGCGGAGGCCCCCACCGAGGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp GGCCCTCGGTGGGGGCCTCCGCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGGGCAGCGCAGGGCCCTaGACCCTGGAACCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: GPRWGPPLRLRLRGSSWVGSAGP*TLEPEP
Trigger: AGGCTCTGGTTCCAGGGTCCAGGGCCCTGCGCTGCC...CACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGCGGAGGCCCCCACCGAGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp GGCCCTCGGTGGGGGCCTCCGCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGTGGCGCGCCCCAATCTaGGTGTGGAGGGCACCGATG +
Preference number: 4 (lower is better)
Translates to: GPRWGPPLRLRLRGSSWVWRAPI*VWRAPM
Trigger: CATCGGTGCCCTCCACACGCAGATTGGGGCGCGCCA...CACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGCGGAGGCCCCCACCGAGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CTGCCCTCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCACCAGCCGCCGCGGCCTaGCTCCCTGGAATGACGGCA +
Preference number: 4 (lower is better)
Translates to: LPSCPGRSRRGACVSGTPPAAAA*LPGMTA
Trigger: TGCCGTCATTCCAGGGAGCCAGGCCGCGGCGGCTGG...TGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGAGGGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp GGCCCTCGGTGGGGGCCTCCGCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGGGCCCTGGACCCTaGAACCAGAGCCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: GPRWGPPLRLRLRGSSWVQGPGP*NQSLGC
Trigger: GCATCCCAGGCTCTGGTTCCAGGGTCCAGGGCCCTG...CACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGCGGAGGCCCCCACCGAGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp GGCCCTCGGTGGGGGCCTCCGCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGTCCCACAAGGGCAAGTaGGGGACCTGGACCCCCACC +
Preference number: 4 (lower is better)
Translates to: GPRWGPPLRLRLRGSSWVSHKGK*GTWTPT
Trigger: GGTGGGGGTCCAGGTCCCCCACTTGCCCTTGTGGGA...CACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGCGGAGGCCCCCACCGAGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp GGCCCTCGGTGGGGGCCTCCGCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGAGGAAGACCTGCTCGTaGGTGGGGAGCTCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: GPRWGPPLRLRLRGSSWVRKTCS*VGSSPS
Trigger: CGAGGGAGAGCTCCCCACGCACGAGCAGGTCTTCCT...CACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGCGGAGGCCCCCACCGAGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp GCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGCCCTGACTCTGCAGCCCGGAGCCCTGCCCTCCTaGCCAGGAAGATCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: APAPAPWLLLGAALTLQPGALPS*PGRSRR
Trigger: GCGGCGCGATCTTCCTGGGCAGGAGGGCAGGGCTCC...GGGCTGCAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp GGCCCTCGGTGGGGGCCTCCGCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCGAGCTCCGCATACTTaGCCAGTGAGCGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GPRWGPPLRLRLRGSSWVRAPHT*PVSAAA
Trigger: CGCTGCAGCGCTCACTGGCCAAGTATGCGGAGCTCG...CACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGCGGAGGCCCCCACCGAGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp GGCCCTCGGTGGGGGCCTCCGCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCTTGCCGACGGCCTTTaGGGGCCATTGTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: GPRWGPPLRLRLRGSSWVLADGL*GPLSTQ
Trigger: CTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAG...CACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGCGGAGGCCCCCACCGAGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp CTGCCCTCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAGGCTGGAGGCAGGACTaGGACCTCAGGGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LPSCPGRSRRGACVSGTPGWRQD*DLRVCA
Trigger: GGCACAGACCCTGAGGTCTCAGTCCTGCCTCCAGCC...TGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGAGGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp CTGCCCTCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAGGAGGGCATGCTCGGTaGTTGCTGCCAGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPSCPGRSRRGACVSGTPGGHAR*LLPAGA
Trigger: GGCTCCAGCTGGCAGCAAGCACCGAGCATGCCCTCC...TGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGAGGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CTGCCCTCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAGTAGTCGTGGACGGGTaGCTGGGCCATGGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: LPSCPGRSRRGACVSGTPVVVDG*LGHGPV
Trigger: CACCGGACCATGGCCCAGCCACCCGTCCACGACTAC...TGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGAGGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CAA 72 bp GCCCGAGGCAGCCTCCAGCATGAGGCGGGACAGGCATaGCCCGGAGGTCCTCTGGGTGGGGAGGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: ARGSLQHEAGQA*PGGPLGGEGML
Trigger: GAGCATGCCCTCCCCACCCAGAGGACCTCCGGGCAATGCCTGTCCCGCCTCATGCTGGAGGCTGCCTCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp CTGCCCTCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCATCTTGGGTGCAGCCCTaGCTCTGCAGCCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LPSCPGRSRRGACVSGTPSWVQP*LCSPSH
Trigger: GTGGGAAGGGCTGCAGAGTCAGGGCTGCACCCAAGA...TGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGAGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCGCCAGGGCTGAGGCGTaGAGGGATCCTGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTARAEA*RDPGPH
Trigger: GTGAGGGCCAGGATCCCTGCACGCCTCAGCCCTGGC...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp GCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGCCCTGACTCTGCAGCCCGGCATGCTCGGTGCTTaGTGCCAGCTGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: APAPAPWLLLGAALTLQPGMLGA*CQLEPG
Trigger: CCCTGGCTCCAGCTGGCAGCAAGCACCGAGCATGCC...GGGCTGCAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCGTCTCTTCCGGAACCTaGCAGGCCCTGGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTVSSGT*QALGPS
Trigger: CGAGGGCCCCAGGGCCTGGCAGGTTCCGGAAGAGAC...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp GGCCCTCGGTGGGGGCCTCCGCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGAGCGAGTCGTACCAGTaGAAGAAGAGCCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GPRWGPPLRLRLRGSSWVSESYQ*KKSPRL
Trigger: GAGCCTCGGGCTCTTCTTCCACTGGTACGACTCGCT...CACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGCGGAGGCCCCCACCGAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp GCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGCCCTGACTCTGCAGCCCCGCATACTTGGCCAGTaGGCGCTGCAGCGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: APAPAPWLLLGAALTLQPRILGQ*ALQRLG
Trigger: TCCCAGACGCTGCAGCGCTCACTGGCCAAGTATGCG...GGGCTGCAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCGCAGCCCCAGGAAGCTaGCCTCAGACCGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTAAPGS*PQTDRG
Trigger: CCCTCTGTCGGTCTGAGGTCAGCTTCCTGGGGCTGC...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp GCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGCCCTGACTCTGCAGCCCTGGCCGCACTGGATCTaGGTCAGGGAGTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: APAPAPWLLLGAALTLQPWPHWI*VRESQP
Trigger: GGGCTGTGACTCCCTGACGCAGATCCAGTGCGGCCA...GGGCTGCAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TGCTCTCACCTGCGGACCCTCGGAAGGGACTGGACAAGAGGGCAGGGGTCTCGCTCTCCTCGGGTCAGGTaGACGGGCCCCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CSHLRTLGRDWTRGQGSRSPRVR*TGPTSR
Trigger: GCGGCTGGTGGGGCCCGTCCACCTGACCCGAGGAGA...GCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp GCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGCCCTGACTCTGCAGCCCCCCTGCTTGAGACACTaGCAGCTCACGGCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: APAPAPWLLLGAALTLQPPCLRH*QLTACG
Trigger: TCCACAGGCCGTGAGCTGTCAGTGTCTCAAGCAGGG...GGGCTGCAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TGCTCTCACCTGCGGACCCTCGGAAGGGACTGGACAAGAGGGCAGGGGTCTCGCGGTGAATCTGGGCCCTaGGGCTCTGCAGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: CSHLRTLGRDWTRGQGSRGESGP*GSAAGR
Trigger: GCGGCCAGCTGCAGAGCCGCAGGGCCCAGATTCACC...GCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCGGCACGCTTCAGGTGTaGCTTGCCAAGCTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTGTLQV*LAKLPA
Trigger: CGCAGGCAGCTTGGCAAGGCACACCTGAAGCGTGCC...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp AGAGCCTGGGATGCAGGGCAGGCTGCTCTCACCTGCGGACCCTCGGAAGGGACTAGCAGCGACACCACCTaGAGGCTGGCGCCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: RAWDAGQAALTCGPSEGTSSDTT*RLAPAS
Trigger: AGAGGCGGGCGCCAGCCTGCAGGTGGTGTCGCTGCT...AGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCCCAGGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp AGAGCCTGGGATGCAGGGCAGGCTGCTCTCACCTGCGGACCCTCGGAAGGGACTGTGCAGGAGCGGTCCTaGCGCGCCCCAATCTGCGTG +
Preference number: 4 (lower is better)
Translates to: RAWDAGQAALTCGPSEGTVQERS*RAPICV
Trigger: CACGCAGATTGGGGCGCGCCAGGACCGCTCCTGCAC...AGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCCCAGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCTGGTGGGTCTTAGGCTaGATGTCCGGGGCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTWWVLG*MSGASA
Trigger: TGCCGAGGCCCCGGACATCCAGCCTAAGACCCACCA...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CTGCCCTCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCATGGCATCCTGGCCTCTaGCTTCTGGTGGGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: LPSCPGRSRRGACVSGTPWHPGL*LLVGLR
Trigger: CCTAAGACCCACCAGAAGCCAGAGGCCAGGATGCCA...TGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGAGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CCCCAGGCTCAGAGAGAAGTGACACGCCCAGGAGCTGGAGGGTGGCACCCATGCGAAGCACGAGGGAGGTaGCAGCGCAGGGCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PQAQREVTRPGAGGWHPCEARGR*QRRALD
Trigger: GTCCAGGGCCCTGCGCTGCCACCTCCCTCGTGCTTC...GCATGGGTGCCACCCTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCCGGCGCCTGCGTCTCTaGGACCCCAAACACCCTACT +
Preference number: 4 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTRRLRL*DPKHPT
Trigger: AGTAGGGTGTTTGGGGTCCCAGAGACGCAGGCGCCG...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp GCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGCCCTGACTCTGCAGCCCTTGTCAATCTGCTGGTaGATCTGGGCCCTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: APAPAPWLLLGAALTLQPLSICW*IWALRL
Trigger: GAGCCGCAGGGCCCAGATTCACCAGCAGATTGACAA...GGGCTGCAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp TGCTCTCACCTGCGGACCCTCGGAAGGGACTGGACAAGAGGGCAGGGGTCTCGCGGGCCTGGGCCATCATaGGCTGCTCCAGTGCGCAGA +
Preference number: 4 (lower is better)
Translates to: CSHLRTLGRDWTRGQGSRGPGPS*AAPVRR
Trigger: TCTGCGCACTGGAGCAGCTCATGATGGCCCAGGCCC...GCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGACGCTCCTCCAGCTCCTaGGGCAGCACAGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: FLPTAFGGHCPPSTRRPGRSSSS*GSTGPR
Trigger: CCGAGGCCCTGTGCTGCCGCAGGAGCTGGAGGAGCG...TCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCACTGGCCCACGTGGATaGCGGGGTCTTGCAACCATG +
Preference number: 4 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTTGPRG*RGLATM
Trigger: CATGGTTGCAAGACCCCGGCATCCACGTGGGCCAGT...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TGCTCTCACCTGCGGACCCTCGGAAGGGACTGGACAAGAGGGCAGGGGTCTCGCAGGCGGGACAGGCATTaGCCGGAGGTCCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CSHLRTLGRDWTRGQGSRRRDRH*PEVLWV
Trigger: CACCCAGAGGACCTCCGGGCAATGCCTGTCCCGCCT...GCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp GCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGCCCTGACTCTGCAGCCCGCCTCTGGCTTCTGGTaGGTCTTAGGCTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: APAPAPWLLLGAALTLQPASGFW*VLGWMS
Trigger: GGACATCCAGCCTAAGACCCACCAGAAGCCAGAGGC...GGGCTGCAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp GCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGCCCTGACTCTGCAGCCCCAACCATGCTCCCTCTaGCTCCTTAGAAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: APAPAPWLLLGAALTLQPQPCSL*LLRSPL
Trigger: CAGGGGGCTTCTAAGGAGCCAGAGGGAGCATGGTTG...GGGCTGCAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TGCTCTCACCTGCGGACCCTCGGAAGGGACTGGACAAGAGGGCAGGGGTCTCGCGGGGACTGGCCCACGTaGATGCCGGGGTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: CSHLRTLGRDWTRGQGSRGDWPT*MPGSCN
Trigger: GTTGCAAGACCCCGGCATCCACGTGGGCCAGTCCCC...GCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCGGGAATGACTCCCGCTaGCCCTGTCTCTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTGNDSR*PCLFRN
Trigger: GTTCCGGAAGAGACAGGGCCAGCGGGAGTCATTCCC...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CAA 72 bp GGAGGTGGTGTTCTTGCCGACGGCCTTTGGGGGCCATaGTCCACCCAGTACACGGAGGCCTGGAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GGGVLADGLWGP*STQYTEAWRQP
Trigger: GGGCTGCCTCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAACACCACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp TTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGATCTCCCTCAGGAGGCTaGAGGCCCCAGCGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: FLPTAFGGHCPPSTRRPGSPSGG*RPQRPS
Trigger: AGAGGGCCGCTGGGGCCTTCAGCCTCCTGAGGGAGA...TCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp CATTCTGCTGAGACAGGGATTTTCCCACAAGGGCAAGTGGGGGACCTGGACCCCGGGGTCCGCATGGCCTaGCGCAGGGCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HSAETGIFPQGQVGDLDPGVRMA*RRASSS
Trigger: GGAGCTGGAGGCCCTGCGGCAGGCCATGCGGACCCC...GGGGTCCAGGTCCCCCACTTGCCCTTGTGGGAAAATCCCTGTCTCAGCAGAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp AGAGCCTGGGATGCAGGGCAGGCTGCTCTCACCTGCGGACCCTCGGAAGGGACTCATGAGCTGCTCCAGTaGGCAGAGGGACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: RAWDAGQAALTCGPSEGTHELLQ*AEGRSA
Trigger: AGCGCTGCGTCCCTCTGCGCACTGGAGCAGCTCATG...AGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCCCAGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGACGCGGCACAGGGCGTaGAGCCGCAGCGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQTRHRA*SRSASS
Trigger: GGAGGAGGCGCTGCGGCTGCACGCCCTGTGCCGCGT...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TGCTCTCACCTGCGGACCCTCGGAAGGGACTGGACAAGAGGGCAGGGGTCTCGCCACGGCCACCCTGGGTaGTTCAAGGATGAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: CSHLRTLGRDWTRGQGSRHGHPG*FKDEGG
Trigger: TCCGCCCTCATCCTTGAAGCACCCAGGGTGGCCGTG...GCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp CCCCAGGCTCAGAGAGAAGTGACACGCCCAGGAGCTGGAGGGTGGCACCCATGCATGCTCGGTGCTTGCTaGCAGCTGGAGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PQAQREVTRPGAGGWHPCMLGAC*QLEPGL
Trigger: CAGCCCTGGCTCCAGCTGGCAGCAAGCACCGAGCAT...GCATGGGTGCCACCCTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp GGTGTTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGGTGGGGAGGGCATaGTCGGTGCTTGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GVLADGLWGPLSTQYTEAWVGRA*SVLAAS
Trigger: GCTGGCAGCAAGCACCGAGCATGCCCTCCCCACCCA...GGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGGGCTGGGGGTCCGCATaGCCTGCCGCAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQGWGSA*PAAGPP
Trigger: TGGAGGCCCTGCGGCAGGCCATGCGGACCCCCAGCC...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CCCCAGGCTCAGAGAGAAGTGACACGCCCAGGAGCTGGAGGGTGGCACCCATGCCGTCGCAGAGGGCCATaGCTACGTGGTAGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PQAQREVTRPGAGGWHPCRRRGP*LRGSGP
Trigger: TGGCCCACTACCACGTAGCCATGGCCCTCTGCGACG...GCATGGGTGCCACCCTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CCCCAGGCTCAGAGAGAAGTGACACGCCCAGGAGCTGGAGGGTGGCACCCATGCACAGGCGTGGCATCCTaGCCTCTGGCTTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PQAQREVTRPGAGGWHPCTGVAS*PLASGG
Trigger: CCCACCAGAAGCCAGAGGCCAGGATGCCACGCCTGT...GCATGGGTGCCACCCTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp AGAGCCTGGGATGCAGGGCAGGCTGCTCTCACCTGCGGACCCTCGGAAGGGACTCACAGGGCGCAGAGGTaGGGAGTCCCTTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RAWDAGQAALTCGPSEGTHRAQR*GVPCSV
Trigger: CACAGAGCAAGGGACTCCCCACCTCTGCGCCCTGTG...AGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCCCAGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp AGAGCCTGGGATGCAGGGCAGGCTGCTCTCACCTGCGGACCCTCGGAAGGGACTGGCCACCATGAGACCTaGGCCACGACACCAGGGACT +
Preference number: 4 (lower is better)
Translates to: RAWDAGQAALTCGPSEGTGHHET*ATTPGT
Trigger: AGTCCCTGGTGTCGTGGCCCAGGTCTCATGGTGGCC...AGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCCCAGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp AGAGCCTGGGATGCAGGGCAGGCTGCTCTCACCTGCGGACCCTCGGAAGGGACTCAGTACACGGAGGCCTaGAGGCAGCCCTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: RAWDAGQAALTCGPSEGTQYTEA*RQPSLP
Trigger: GGGAAGTGAGGGCTGCCTCCAGGCCTCCGTGTACTG...AGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCCCAGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGAGGGGTCTCGCAGAGCTaGGGGCCGCCTTTCTACCCG +
Preference number: 4 (lower is better)
Translates to: FLPTAFGGHCPPSTRRPGGVSQS*GPPFYP
Trigger: CGGGTAGAAAGGCGGCCCCCAGCTCTGCGAGACCCC...TCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp GCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGCCCTGACTCTGCAGCCCCTTGGCCCATTCTGCTaGGACAGGGATTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: APAPAPWLLLGAALTLQPLGPFC*DRDFPT
Trigger: TGTGGGAAAATCCCTGTCTCAGCAGAATGGGCCAAG...GGGCTGCAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TGCTCTCACCTGCGGACCCTCGGAAGGGACTGGACAAGAGGGCAGGGGTCTCGCGCTTCAGGTGTGCCTTaGCAAGCTGCCTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: CSHLRTLGRDWTRGQGSRASGVP*QAACAP
Trigger: AGGAGCGCAGGCAGCTTGGCAAGGCACACCTGAAGC...GCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCGGGGTCTTGCAACCATaGTCCCTCTGGCTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTGVLQP*SLWLLR
Trigger: TCTAAGGAGCCAGAGGGAGCATGGTTGCAAGACCCC...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTCTCCCAAGGCGCACCTaGCCGTGCCGCCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RGTGILLCVGEEATAPITLPRRT*PCRLPG
Trigger: CCCTGGGAGGCGGCACGGGCAGGTGCGCCTTGGGAG...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CATTCTGCTGAGACAGGGATTTTCCCACAAGGGCAAGTGGGGGACCTGGACCCCGCCAGGGCACGCTGCTaGGCCGGGACCCCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: HSAETGIFPQGQVGDLDPARARC*AGTPVS
Trigger: GCTTACTGGGGTCCCGGCCCAGCAGCGTGCCCTGGC...GGGGTCCAGGTCCCCCACTTGCCCTTGTGGGAAAATCCCTGTCTCAGCAGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CAGGAAGCTGACCTCAGACCGACAGAGGGACTGGCATCCTTCTGTGTGTGGGTGACACCACCTGCAGGCTaGCGCCCGCCTCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: QEADLRPTEGLASFCVWVTPPAG*RPPLPQ
Trigger: CTGCGGGAGAGGCGGGCGCCAGCCTGCAGGTGGTGT...CACCCACACACAGAAGGATGCCAGTCCCTCTGTCGGTCTGAGGTCAGCTTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TGCTCTCACCTGCGGACCCTCGGAAGGGACTGGACAAGAGGGCAGGGGTCTCGCACCCTCGGAAGGGACTaGACAAGAGGGCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: CSHLRTLGRDWTRGQGSRTLGRD*TRGQGS
Trigger: AGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGT...GCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CAGGAAGCTGACCTCAGACCGACAGAGGGACTGGCATCCTTCTGTGTGTGGGTGCCGGCTCAGGCAGGTTaGGGAGCCCTGCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QEADLRPTEGLASFCVWVPAQAG*GALPSC
Trigger: GCAGGAGGGCAGGGCTCCCCAACCTGCCTGAGCCGG...CACCCACACACAGAAGGATGCCAGTCCCTCTGTCGGTCTGAGGTCAGCTTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp TGCTCTCACCTGCGGACCCTCGGAAGGGACTGGACAAGAGGGCAGGGGTCTCGCCCCCATTTTCTTGGCTaGAGCACGAGGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CSHLRTLGRDWTRGQGSRPHFLG*STREVA
Trigger: TGCCACCTCCCTCGTGCTTCAGCCAAGAAAATGGGG...GCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp GGTGTTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGGCCATCATGAGCTaGTCCAGTGCGCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: GVLADGLWGPLSTQYTEAWAIMS*SSAQRD
Trigger: GTCCCTCTGCGCACTGGAGCAGCTCATGATGGCCCA...GGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp GGTGTTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGGCCATGGTCCGGTaGACTAGCCTGTACTCGGCT +
Preference number: 4 (lower is better)
Translates to: GVLADGLWGPLSTQYTEAWAMVR*TSLYSA
Trigger: AGCCGAGTACAGGCTAGTGCACCGGACCATGGCCCA...GGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGATCTACCCGGGGTCTTTaGCTCAGCCCTCCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: FLPTAFGGHCPPSTRRPGSTRGL*LSPPKA
Trigger: CGCCTTGGGAGGGCTGAGGCAAAGACCCCGGGTAGA...TCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGACAGGCTGCTCTCACCTaGGGACCCTCGGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: FLPTAFGGHCPPSTRRPGQAALT*GPSEGT
Trigger: AGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTG...TCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp AGGCCCCAGGCTCAGAGAGAAGTGACACGCCCAGGAGCTGGAGGGTGGCACCCAACACATTCCTGGGCCTaGGCCATCATGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RPQAQREVTRPGAGGWHPTHSWA*AIMSCS
Trigger: GGAGCAGCTCATGATGGCCCAGGCCCAGGAATGTGT...TGGGTGCCACCCTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCTGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTTACTCGGCTGCCACCTaGGCGGCCTCCTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RGTGILLCVGEEATAPITYSAAT*AASCAR
Trigger: CCTGGCGCAGGAGGCCGCCCAGGTGGCAGCCGAGTA...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp GGTGTTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGCTGTGGGTGTGTCTaGCTGCTGCATGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GVLADGLWGPLSTQYTEACCGCV*LLHGGG
Trigger: CCCTCCACCATGCAGCAGCCAGACACACCCACAGCA...GGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CAGGAAGCTGACCTCAGACCGACAGAGGGACTGGCATCCTTCTGTGTGTGGGTGACAGCTCACGGCCTGTaGAGGCCAGCAGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: QEADLRPTEGLASFCVWVTAHGL*RPAGAA
Trigger: GGCCGCTCCTGCTGGCCTCCACAGGCCGTGAGCTGT...CACCCACACACAGAAGGATGCCAGTCCCTCTGTCGGTCTGAGGTCAGCTTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp AGAGCCTGGGATGCAGGGCAGGCTGCTCTCACCTGCGGACCCTCGGAAGGGACTCTCTCCAAAGTGCACTaGGATCAGCTCCTTCAGCGG +
Preference number: 4 (lower is better)
Translates to: RAWDAGQAALTCGPSEGTLSKVH*DQLLQR
Trigger: CCGCTGAAGGAGCTGATCTCAGTGCACTTTGGAGAG...AGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCCCAGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTCCTTTCGGCTCCAGTTaGGGAGGGGCCGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: RGTGILLCVGEEATAPITPFGSS*GGAGDW
Trigger: CCAGTCCCCGGCCCCTCCTCAACTGGAGCCGAAAGG...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp CATTCTGCTGAGACAGGGATTTTCCCACAAGGGCAAGTGGGGGACCTGGACCCCAGGCAGCCTCCAGCATaGGGCGGGACAGGCATTGCC +
Preference number: 4 (lower is better)
Translates to: HSAETGIFPQGQVGDLDPRQPPA*GGTGIA
Trigger: GGCAATGCCTGTCCCGCCTCATGCTGGAGGCTGCCT...GGGGTCCAGGTCCCCCACTTGCCCTTGTGGGAAAATCCCTGTCTCAGCAGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp CATTCTGCTGAGACAGGGATTTTCCCACAAGGGCAAGTGGGGGACCTGGACCCCGGCTTAGGGCCACCATaGGACCTGGGCCACGACACC +
Preference number: 4 (lower is better)
Translates to: HSAETGIFPQGQVGDLDPGLGPP*DLGHDT
Trigger: GGTGTCGTGGCCCAGGTCTCATGGTGGCCCTAAGCC...GGGGTCCAGGTCCCCCACTTGCCCTTGTGGGAAAATCCCTGTCTCAGCAGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTTGGGCCCTGCGGCTCTaGAGCTGGCCGCACTGGATC +
Preference number: 4 (lower is better)
Translates to: RGTGILLCVGEEATAPITWALRL*SWPHWI
Trigger: GATCCAGTGCGGCCAGCTGCAGAGCCGCAGGGCCCA...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp CCCCAGGCTCAGAGAGAAGTGACACGCCCAGGAGCTGGAGGGTGGCACCCATGCCTCTCACCCGGTTGTTaGTGGTGGCTCTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: PQAQREVTRPGAGGWHPCLSPGC*WWLCRG
Trigger: ACCTCTACAGAGCCACCAGCAACAACCGGGTGAGAG...GCATGGGTGCCACCCTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGACAGCTTCGCTCCCATaGCGGCCAGGGTCCACGCCA +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQTASLP*RPGSTP
Trigger: TGGCGTGGACCCTGGCCGGCATGGGAGCGAAGCTGT...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTAAGGCCAGGGCACGCTaGTGGGCCGGGACCCCAGTA +
Preference number: 4 (lower is better)
Translates to: RGTGILLCVGEEATAPITKARAR*WAGTPV
Trigger: TACTGGGGTCCCGGCCCAGCAGCGTGCCCTGGCCTT...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp GGTGTTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTTGGCCAGTGAGCGCTaGAGCGTCTGGGAGATCACA +
Preference number: 4 (lower is better)
Translates to: GVLADGLWGPLSTQYTEALASER*SVWEIT
Trigger: TGTGATCTCCCAGACGCTGCAGCGCTCACTGGCCAA...GGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGATGGATGCCGGGGTCTTaGAACCATGCTCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: FLPTAFGGHCPPSTRRPGWMPGS*NHAPSG
Trigger: GCCAGAGGGAGCATGGTTGCAAGACCCCGGCATCCA...TCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTCCGACTCATTCCGGCTaGGGGTCCGCATGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RGTGILLCVGEEATAPITPTHSG*GSAWPA
Trigger: GGCAGGCCATGCGGACCCCCAGCCGGAATGAGTCGG...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CCCCAGGCTCAGAGAGAAGTGACACGCCCAGGAGCTGGAGGGTGGCACCCATGCAAACGGGACACTTGCTaGGTTGACCAGCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: PQAQREVTRPGAGGWHPCKRDTC*VDQHRA
Trigger: GGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTT...GCATGGGTGCCACCCTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp CAGGAAGCTGACCTCAGACCGACAGAGGGACTGGCATCCTTCTGTGTGTGGGTGGGGCCTCCAGCTCCCTaGTTTCTGCCTCGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: QEADLRPTEGLASFCVWVGPPAP*FLPRRR
Trigger: CCTCCTACGAGGCAGAAATCAGGGAGCTGGAGGCCC...CACCCACACACAGAAGGATGCCAGTCCCTCTGTCGGTCTGAGGTCAGCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGCTGGGGAGACCTGCGTaGCCTTGGCCCATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQLGRPA*PWPILL
Trigger: CAGCAGAATGGGCCAAGGTCACGCAGGTCTCCCCAG...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp CCCCAGGCTCAGAGAGAAGTGACACGCCCAGGAGCTGGAGGGTGGCACCCATGCCACCACCTGCATGGCTaGCCATTCACTGACACAATG +
Preference number: 4 (lower is better)
Translates to: PQAQREVTRPGAGGWHPCHHLHG*PFTDTM
Trigger: CATTGTGTCAGTGAATGGGCAGCCATGCAGGTGGTG...GCATGGGTGCCACCCTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTCGGGTGGCTGGGCCATaGTCCGGTGCACTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: RGTGILLCVGEEATAPITRVAGP*SGALAC
Trigger: ACAGGCTAGTGCACCGGACCATGGCCCAGCCACCCG...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CATTCTGCTGAGACAGGGATTTTCCCACAAGGGCAAGTGGGGGACCTGGACCCCCCAGGAGCTGGAGGGTaGCACCCATGCTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: HSAETGIFPQGQVGDLDPPGAGG*HPCSEQ
Trigger: CTGCTCTGAGCATGGGTGCCACCCTCCAGCTCCTGG...GGGGTCCAGGTCCCCCACTTGCCCTTGTGGGAAAATCCCTGTCTCAGCAGAATG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGGGAAGTACTCGGCCTTaGCATGCACCAGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQGSTRP*HAPGQS
Trigger: GGACTGCCCTGGTGCATGTCAAGGCCGAGTACTTCC...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTAGTGGCTGCAGGGAATaGCTCCCGCTGGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: RGTGILLCVGEEATAPITSGCRE*LPLALS
Trigger: AGACAGGGCCAGCGGGAGTCATTCCCTGCAGCCACT...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp CATTCTGCTGAGACAGGGATTTTCCCACAAGGGCAAGTGGGGGACCTGGACCCCGCGCCCGTCCGCATCTaGAGCTCCTTGTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: HSAETGIFPQGQVGDLDPAPVRI*SSLSIC
Trigger: GCAGATTGACAAGGAGCTGCAGATGCGGACGGGCGC...GGGGTCCAGGTCCCCCACTTGCCCTTGTGGGAAAATCCCTGTCTCAGCAGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTGGCTGCAGGAAGACCTaGTCGTGCGTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGTGILLCVGEEATAPITGCRKT*SCVGSS
Trigger: AGAGCTCCCCACGCACGAGCAGGTCTTCCTGCAGCC...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CAGGAAGCTGACCTCAGACCGACAGAGGGACTGGCATCCTTCTGTGTGTGGGTGTGCAGCTGGCCGCACTaGATCTGCGTCAGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: QEADLRPTEGLASFCVWVCSWPH*ICVRES
Trigger: TGACTCCCTGACGCAGATCCAGTGCGGCCAGCTGCA...CACCCACACACAGAAGGATGCCAGTCCCTCTGTCGGTCTGAGGTCAGCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGACCAGTCCAGCTCCTTaGTCTCCTTCAGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQTSPAP*SPSGPG
Trigger: CCCTGGGCCTGAAGGAGACCAAGGAGCTGGACTGGT...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGCCAGTCTTGCCCTGCTaGGCCTTTCGGCTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQPVLPC*AFRLQL
Trigger: CAACTGGAGCCGAAAGGCCCAGCAGGGCAAGACTGG...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTGGTCTGCGGGTGCTGTaGGTGTGTCTGGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RGTGILLCVGEEATAPITGLRVL*VCLAAA
Trigger: TGCAGCAGCCAGACACACCCACAGCACCCGCAGACC...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp CATTCTGCTGAGACAGGGATTTTCCCACAAGGGCAAGTGGGGGACCTGGACCCCGGTTGTAATAGGCTGTaGGCAGCTCCAGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: HSAETGIFPQGQVGDLDPGCNRL*AAPGPT
Trigger: AGTCGGGCCTGGAGCTGCTCACAGCCTATTACAACC...GGGGTCCAGGTCCCCCACTTGCCCTTGTGGGAAAATCCCTGTCTCAGCAGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGGGAGGGCACCGATGTTaGAGAGAACGCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQGGHRC*RERCPS
Trigger: AGAAGGGCAGCGTTCTCTTCAACATCGGTGCCCTCC...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGCGTGTCTCCACCACCTaGATGGCTGCCCATTCACTG +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQRVSTT*MAAHSL
Trigger: CAGTGAATGGGCAGCCATGCAGGTGGTGGAGACACG...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTTCTGGGCTCGGCGCATaGGAGAAGTTCTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RGTGILLCVGEEATAPITSGLGA*EKFSLR
Trigger: CCTGAGGGAGAACTTCTCCCATGCGCCGAGCCCAGA...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGGACCGACAGAGGGACTaGCATCCTTCTGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQDRQRD*HPSVCG
Trigger: CCCACACACAGAAGGATGCCAGTCCCTCTGTCGGTC...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGGACACCAGGGACTCCTaGGCAAACGGGACACTTGCT +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQDTRDS*ANGTLA
Trigger: AGCAAGTGTCCCGTTTGCCCAGGAGTCCCTGGTGTC...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp CATTCTGCTGAGACAGGGATTTTCCCACAAGGGCAAGTGGGGGACCTGGACCCCGGGCTCAGACAGGTCTaGCCAGTCTTTAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: HSAETGIFPQGQVGDLDPGLRQV*PVFNGQ
Trigger: CTGCCCATTAAAGACTGGTCAGACCTGTCTGAGCCC...GGGGTCCAGGTCCCCCACTTGCCCTTGTGGGAAAATCCCTGTCTCAGCAGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CATTCTGCTGAGACAGGGATTTTCCCACAAGGGCAAGTGGGGGACCTGGACCCCCCCGGTTGTTGCTGGTaGCTCTGTAGAGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HSAETGIFPQGQVGDLDPPGCCW*LCRGSQ
Trigger: CTGAGAACCTCTACAGAGCCACCAGCAACAACCGGG...GGGGTCCAGGTCCCCCACTTGCCCTTGTGGGAAAATCCCTGTCTCAGCAGAATG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp TTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTGGCTCCTGGCAGGGGTaGGGAAGCGCGCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLTKLTRAGETCVTLAHSGSWQG*GSAHPG
Trigger: TCCTGGATGCGCGCTTCCTCACCCCTGCCAGGAGCC...AGAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTAGGGAGTCACAGCCCTaGAGCCGCGGGCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LLTKLTRAGETCVTLAHSRESQP*SRGLSS
Trigger: CGAGGAGAGCCCGCGGCTGCAGGGCTGTGACTCCCT...AGAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGCCGTCCTCTCCAAAGTaGACTGAGATCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQPSSPK*TEISSF
Trigger: GAAGGAGCTGATCTCAGTGCACTTTGGAGAGGACGG...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTCGCAGCGCCTCCTCCTaGCCCAGGATGGCACGCTTC +
Preference number: 4 (lower is better)
Translates to: LLTKLTRAGETCVTLAHSRSASS*PRMARF
Trigger: GAAGCGTGCCATCCTGGGGCAGGAGGAGGCGCTGCG...AGAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGTCGCGCCGCGGCGCCTaGGTCTCTGGGACCCCAAAC +
Preference number: 4 (lower is better)
Translates to: STVLLTKLTRAGETCVTLSRRGA*VSGTPN
Trigger: GTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGA...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGTCAAACACACATTCCTaGGCCTGGGCCATCATGAGC +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQSNTHS*AWAIMS
Trigger: GCTCATGATGGCCCAGGCCCAGGAATGTGTGTTTGA...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGGGCTGCTGAGCGGGTaGCGGCTGCCCCCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: SLIHSFINQINTCWGDLRGLLSG*RLPPSG
Trigger: GCCACTAGGGGGCAGCCGCCACCCGCTCAGCAGCCC...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGAACCAAATTAACACGTaGTGGGGAGACCTGCGTGAC +
Preference number: 4 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQNQINT*WGDLRD
Trigger: GTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTT...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTCTGCGGCTCTGCAGCTaGCCGCACTGGATCTGCGTC +
Preference number: 4 (lower is better)
Translates to: LLTKLTRAGETCVTLAHSLRLCS*PHWICV
Trigger: GACGCAGATCCAGTGCGGCCAGCTGCAGAGCCGCAG...AGAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTCTCTCCCTCGGTCGCTaGGGAGCCGTCGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SLIHSFINQINTCWGDLRLSLGR*GAVAEG
Trigger: GCCCTCTGCGACGGCTCCCCAGCGACCGAGGGAGAG...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTAGACCTGCTCGTGCGTaGGGAGCTCTCCCTCGGTCG +
Preference number: 4 (lower is better)
Translates to: LLTKLTRAGETCVTLAHSRPARA*GALPRS
Trigger: CGACCGAGGGAGAGCTCCCCACGCACGAGCAGGTCT...AGAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCCCCCTGGGACAGGCGTaGCATCCTGGCCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FINQINTCWGDLRDLGPFPLGQA*HPGLWL
Trigger: AAGCCAGAGGCCAGGATGCCACGCCTGTCCCAGGGG...GAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCCGCGGCCTGGCTCCCTaGAATGACGGCAGCGATGAG +
Preference number: 4 (lower is better)
Translates to: FINQINTCWGDLRDLGPFRGLAP*NDGSDE
Trigger: CTCATCGCTGCCGTCATTCCAGGGAGCCAGGCCGCG...GAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp CATTCTGCTGAGACAGGGATTTTCCCACAAGGGCAAGTGGGGGACCTGGACCCCCAAATTAACACGTGCTaGGGAGACCTGCGTGACCTT +
Preference number: 4 (lower is better)
Translates to: HSAETGIFPQGQVGDLDPQINTC*GDLRDL
Trigger: AAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTG...GGGGTCCAGGTCCCCCACTTGCCCTTGTGGGAAAATCCCTGTCTCAGCAGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGCCCGGCCTAGAGGTCTaGGGGTGCTGTGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: STVLLTKLTRAGETCVTLPGLEV*GCCGCV
Trigger: GACACACCCACAGCACCCGCAGACCTCTAGGCCGGG...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGGATGCAGGGCAGGCTaGTCTCACCTGCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: STVLLTKLTRAGETCVTLGCRAG*SHLRTL
Trigger: GAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCC...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTCCCAAACACCCTACTTaGACCCCCATTTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RGTGILLCVGEEATAPITPKHPT*TPIFLA
Trigger: AGCCAAGAAAATGGGGGTGCAAGTAGGGTGTTTGGG...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTCGCAGCGCTCATGTCTaGGCTCGGCGCATGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LLTKLTRAGETCVTLAHSRSAHV*ARRMGE
Trigger: TTCTCCCATGCGCCGAGCCCAGACATGAGCGCTGCG...AGAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGTCGTGGACGGGTGGCTaGGCCATGGTCCGGTGCACT +
Preference number: 4 (lower is better)
Translates to: STVLLTKLTRAGETCVTLSWTGG*AMVRCT
Trigger: AGTGCACCGGACCATGGCCCAGCCACCCGTCCACGA...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp TTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCGGATCATGGGGACAGTaGCAGCTTCGCTCCCATGCC +
Preference number: 4 (lower is better)
Translates to: FINQINTCWGDLRDLGPFGSWGQ*QLRSHA
Trigger: GGCATGGGAGCGAAGCTGTCACTGTCCCCATGATCC...GAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTCAGCTCCCTGATTTCTaGCTCGTAGGAGGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: LLTKLTRAGETCVTLAHSQLPDF*LVGGAV
Trigger: GACGGCGCCTCCTACGAGGCAGAAATCAGGGAGCTG...AGAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTAACCAGAGCCTGGGATaGAGGGCAGGCTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LLTKLTRAGETCVTLAHSNQSLG*RAGCSH
Trigger: GTGAGAGCAGCCTGCCCTGCATCCCAGGCTCTGGTT...AGAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGAGCGCTGCAGCGTCTaGGAGATCACAGCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: STVLLTKLTRAGETCVTLERCSV*EITARS
Trigger: GCTTCGGGCTGTGATCTCCCAGACGCTGCAGCGCTC...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTTCAGGCCCCTTCCCCTaGGACAGGCGTGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: SLIHSFINQINTCWGDLRSGPFP*DRRGIL
Trigger: CAGGATGCCACGCCTGTCCCAGGGGAAGGGGCCTGA...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCGCCGCCACCGGTTCTTaGCTGAGAACACAGACAGGG +
Preference number: 4 (lower is better)
Translates to: FINQINTCWGDLRDLGPFAATGS*LRTQTG
Trigger: CCCTGTCTGTGTTCTCAGCCAAGAACCGGTGGCGGC...GAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
3UTR CAA 72 bp ACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTaGGCCCATTCTGCTGAGACAGGGATTTTCCCACAA +
Preference number: 4 (lower is better)
Translates to: TKLTRAGETCVT*AHSAETGIFPQ
Trigger: TTGTGGGAAAATCCCTGTCTCAGCAGAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGAGGCTCAGAGAGAAGTaGCACGCCCAGGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: STVLLTKLTRAGETCVTLRLREK*HAQELE
Trigger: CTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCT...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTCCTCCAGTCTTGCCCTaGTGGGCCTTTCGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLIHSFINQINTCWGDLRPPVLP*WAFRLQ
Trigger: CTGGAGCCGAAAGGCCCAGCAGGGCAAGACTGGAGG...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGGAGGGTGGCACCCATaGTCAGAGCAGGACAGCAAG +
Preference number: 4 (lower is better)
Translates to: STVLLTKLTRAGETCVTLGGWHP*SEQDSK
Trigger: CTTGCTGTCCTGCTCTGAGCATGGGTGCCACCCTCC...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGCCCGGGGGTACAGATaGGATGGCTGTGAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SLIHSFINQINTCWGDLRARGYR*DGCEEH
Trigger: GTGCTCCTCACAGCCATCCCATCTGTACCCCCGGGC...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGAGGTGGGGAGTCCCTTaGTCTGTGCACAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: STVLLTKLTRAGETCVTLRWGVP*SVHRQD
Trigger: GTCCTGTCTGTGCACAGAGCAAGGGACTCCCCACCT...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCGCACCCCCATTTTCTTaGCTGAAGCACGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: FINQINTCWGDLRDLGPFAPPFS*LKHEGG
Trigger: ACCTCCCTCGTGCTTCAGCCAAGAAAATGGGGGTGC...GAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTCAGATGGGATGGCTGTaGGGAGCACCCTGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SLIHSFINQINTCWGDLRQMGWL*GAPCKE
Trigger: CTCCTTACAGGGTGCTCCTCACAGCCATCCCATCTG...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTTACTCGGCCTTGACATaGACCAGGGCAGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLIHSFINQINTCWGDLRYSALT*TRAVQE
Trigger: CTCCTGGACTGCCCTGGTGCATGTCAAGGCCGAGTA...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTCACCCGGTTGTTGCTaGTGGCTCTGTAGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: FINQINTCWGDLRDLGPFSPGCC*WLCRGS
Trigger: AGAACCTCTACAGAGCCACCAGCAACAACCGGGTGA...GAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CCA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCATCCTTCTGTGTGTaGGTGAAGAGGCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: STVLLTKLTRAGETCVTLASFCV*VKRPQL
Trigger: GAGCTGTGGCCTCTTCACCCACACACAGAAGGATGC...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR TCA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTTGGCTGCCCATTCACTaGCACAATGTAGTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SLIHSFINQINTCWGDLRWLPIH*HNVVAL
Trigger: GAGGGCGACTACATTGTGTCAGTGAATGGGCAGCCA...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR GCA 90 bp TCCTTGATCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGGCAAACGGGACACTTaGTGGGTTGACCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: SLIHSFINQINTCWGDLRGKRDT*WVDQHR
Trigger: TCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCC...ACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGATCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS GCA 90 bp GCCCGCGCCGTCCGGCCTCTCCTCCAGGATCATCGCCGCACCCGCTaGGCTGGGGGTCCCTCGGGGTCAGCCAGCCCGCCGCTCGCGCAG +
Preference number: 5 (lower is better)
Translates to: ARAVRPLLQDHRRTR*AGGPSGSASPPLAQ
Trigger: CTGCGCGAGCGGCGGGCTGGCTGACCCCGAGGGACCCCCAGCGCAGCGGGTGCGGCGATGATCCTGGAGGAGAGGCCGGACGGCGCGGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS CCA 90 bp CGCCGTCCGGCCTCTCCTCCAGGATCATCGCCGCACCCGCTGCGCTaGGGGTCCCTCGGGGTCAGCCAGCCCGCCGCTCGCGCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: RRPASPPGSSPHPLR*GSLGVSQPAARAAL
Trigger: GAGCGCTGCGCGAGCGGCGGGCTGGCTGACCCCGAGGGACCCCCAGCGCAGCGGGTGCGGCGATGATCCTGGAGGAGAGGCCGGACGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS GCA 90 bp TCGCGCAGGACGCGGCACAGGGCGTGCAGCCGCAGCGCCTCCTCCTaGCCCAGGATGGCACGCTTCAGGTGTGCCTTGCCTGCACGCGGG +
Preference number: 5 (lower is better)
Translates to: SRRTRHRACSRSASS*PRMARFRCALPARG
Trigger: CCCGCGTGCAGGCAAGGCACACCTGAAGCGTGCCATCCTGGGGCAGGAGGAGGCGCTGCGGCTGCACGCCCTGTGCCGCGTCCTGCGCGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS GCA 90 bp TCGCGCAGGACGCGGCACAGGGCGTGCAGCCGCAGCGCCTCCTCCTaGCCCAGGATGGCACGCTTCAGGTGTGCCTTGCCAAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SRRTRHRACSRSASS*PRMARFRCALPSCL
Trigger: CAGGCAGCTTGGCAAGGCACACCTGAAGCGTGCCATCCTGGGGCAGGAGGAGGCGCTGCGGCTGCACGCCCTGTGCCGCGTCCTGCGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS GCA 90 bp TCCCCCAAGCTGGGCAGTCTAGAGCTGGGCAGCAGCGACACCACCTaGAGGCTGGCGCCCGCCTCTCCCGCAGCCTTCAGCTCCGTCACC +
Preference number: 5 (lower is better)
Translates to: SPKLGSLELGSSDTT*RLAPASPAAFSSVT
Trigger: GGTGACGGAGCTGAAGGCTGCGGGAGAGGCGGGCGCCAGCCTGCAGGTGGTGTCGCTGCTGCCCAGCTCTAGACTGCCCAGCTTGGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS CCA 90 bp ACGCGGGGCACTGGGATGTCACACACCATGTGGGCCCGTGGGCCCTaGGACGTGGCAGAAGGAGTGGGCAACGCCAGGGCTGTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: TRGTGMSHTMWARGP*DVAEGVGNARAVGL
Trigger: GAGCCCCACAGCCCTGGCGTTGCCCACTCCTTCTGCCACGTCCCAGGGCCCACGGGCCCACATGGTGTGTGACATCCCAGTGCCCCGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS GCA 90 bp CGGCGGGCACCCTCGGTGCAGGAGCGGTCCTGGCGCGCCCCAATCTaGGTGTGGAGGGCACCGATGTTGAAGAGAACGCTGCCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: RRAPSVQERSWRAPI*VWRAPMLKRTLPFS
Trigger: CGAGAAGGGCAGCGTTCTCTTCAACATCGGTGCCCTCCACACGCAGATTGGGGCGCGCCAGGACCGCTCCTGCACCGAGGGTGCCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS GCA 90 bp AGGGCTGAGGCGTGCAGGGATCCTGGCCCTCACGGCCACCCTGGGTaGTTCAAGGATGAGGGCGGAGCTGGCTTCACTGGGGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: RAEACRDPGPHGHPG*FKDEGGAGFTGAQG
Trigger: GCCCTGTGCCCCAGTGAAGCCAGCTCCGCCCTCATCCTTGAAGCACCCAGGGTGGCCGTGAGGGCCAGGATCCCTGCACGCCTCAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS GCA 90 bp CGCCTCCTCCTGCCCCAGGATGGCACGCTTCAGGTGTGCCTTGCCTaGACGCGGGGCACTGGGATGTCACACACCATGTGGGCCCGTGGG +
Preference number: 5 (lower is better)
Translates to: RLLLPQDGTLQVCLA*TRGTGMSHTMWARG
Trigger: CCCACGGGCCCACATGGTGTGTGACATCCCAGTGCCCCGCGTGCAGGCAAGGCACACCTGAAGCGTGCCATCCTGGGGCAGGAGGAGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS CCA 90 bp TGCCTGCACGCGGGGCACTGGGATGTCACACACCATGTGGGCCCGTaGGCCCTGGGACGTGGCAGAAGGAGTGGGCAACGCCAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: CLHAGHWDVTHHVGP*ALGRGRRSGQRQGC
Trigger: ACAGCCCTGGCGTTGCCCACTCCTTCTGCCACGTCCCAGGGCCCACGGGCCCACATGGTGTGTGACATCCCAGTGCCCCGCGTGCAGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS CCA 90 bp GTGTGCCTTGCCTGCACGCGGGGCACTGGGATGTCACACACCATGTaGGCCCGTGGGCCCTGGGACGTGGCAGAAGGAGTGGGCAACGCC +
Preference number: 5 (lower is better)
Translates to: VCLACTRGTGMSHTM*ARGPWDVAEGVGNA
Trigger: GGCGTTGCCCACTCCTTCTGCCACGTCCCAGGGCCCACGGGCCCACATGGTGTGTGACATCCCAGTGCCCCGCGTGCAGGCAAGGCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS CCA 90 bp CCAGGATGGCACGCTTCAGGTGTGCCTTGCCTGCACGCGGGGCACTaGGATGTCACACACCATGTGGGCCCGTGGGCCCTGGGACGTGGC +
Preference number: 5 (lower is better)
Translates to: PGWHASGVPCLHAGH*DVTHHVGPWALGRG
Trigger: GCCACGTCCCAGGGCCCACGGGCCCACATGGTGTGTGACATCCCAGTGCCCCGCGTGCAGGCAAGGCACACCTGAAGCGTGCCATCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS CCA 90 bp TCCAGTGCGCAGAGGGACGCAGCGCTCATGTCTGGGCTCGGCGCATaGGAGAAGTTCTCCCTCAGGAGGCTGAAGGCCCCAGCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: SSAQRDAALMSGLGA*EKFSLRRLKAPAAL
Trigger: GAGGGCCGCTGGGGCCTTCAGCCTCCTGAGGGAGAACTTCTCCCATGCGCCGAGCCCAGACATGAGCGCTGCGTCCCTCTGCGCACTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS CCA 90 bp CAGTCCAGGAGACAGGCACGTAGTCGTGGACGGGTGGCTGGGCCATaGTCCGGTGCACTAGCCTGTACTCGGCTGCCACCTGGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: QSRRQARSRGRVAGP*SGALACTRLPPGRP
Trigger: AGGCCGCCCAGGTGGCAGCCGAGTACAGGCTAGTGCACCGGACCATGGCCCAGCCACCCGTCCACGACTACGTGCCTGTCTCCTGGACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS CCA 90 bp TCTCCCCGAAGCGTGAGGCCAAAGCCGCCCTCTCCTCGGGTCAGGTaGACGGGCCCCACCAGCCGCCACCGGTTCTTGGCTGAGAACACA +
Preference number: 5 (lower is better)
Translates to: SPRSVRPKPPSPRVR*TGPTSRHRFLAENT
Trigger: TGTGTTCTCAGCCAAGAACCGGTGGCGGCTGGTGGGGCCCGTCCACCTGACCCGAGGAGAGGGCGGCTTTGGCCTCACGCTTCGGGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS CCA 90 bp CCTGCCACCGTTGGTGACCATCTGAGCCCCAGGGCACTCCACCCATaGGCGCCTTACCAAGCTGCCTGCGCTCCTCCAGCTCCTGCGGCA +
Preference number: 5 (lower is better)
Translates to: PATVGDHLSPRALHP*APYQAACAPPAPAA
Trigger: TGCCGCAGGAGCTGGAGGAGCGCAGGCAGCTTGGTAAGGCGCCCATGGGTGGAGTGCCCTGGGGCTCAGATGGTCACCAACGGTGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS-3UTR CAA 90 bp TCCTGCCCAGGAAGATCGCGCCGCGGCGCCTGCGTCTCTGGGACCCCAAACACCGTGGATGCCGGGGTCTaGCAACCATGCTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: SCPGRSRRGACVSGTPNTVDAGV*QPCSLW
Trigger: CCAGAGGGAGCATGGTTGCAAGACCCCGGCATCCAC...GGTGTTTGGGGTCCCAGAGACGCAGGCGCCGCGGCGCGATCTTCCTGGGCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CAA 90 bp CCCCAGGCTCAGAGAGAAGTGACACGCCCAGGAGCTGGAGGGTGGCACCCATGCGCCTTTCGGCTCCAGTaGAGGAGGGGCCGGGGACTG +
Preference number: 5 (lower is better)
Translates to: PQAQREVTRPGAGGWHPCAFRLQ*RRGRGL
Trigger: CAGTCCCCGGCCCCTCCTCAACTGGAGCCGAAAGGC...GCATGGGTGCCACCCTCCAGCTCCTGGGCGTGTCACTTCTCTCTGAGCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS TCA 90 bp AGCGGTCCTGGCGCGCCCCAATCTGCGTGTGGAGGGCACCGATGTTaGAGAGAACGCTGCCCTTCTCGAAGGCCAGGGCACGCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SGPGAPQSACGGHRC*RERCPSRRPGHAAG
Trigger: CCCAGCAGCGTGCCCTGGCCTTCGAGAAGGGCAGCGTTCTCTTCAACATCGGTGCCCTCCACACGCAGATTGGGGCGCGCCAGGACCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS CCA 90 bp TCACGGTCGAGCTCCGCATACTTGGCCAGTGAGCGCTGCAGCGTCTaGGAGATCACAGCCCGAAGCAGGTCCACCTCGCGCAGGACGCGG +
Preference number: 5 (lower is better)
Translates to: SRSSSAYLASERCSV*EITARSRSTSRRTR
Trigger: CCGCGTCCTGCGCGAGGTGGACCTGCTTCGGGCTGTGATCTCCCAGACGCTGCAGCGCTCACTGGCCAAGTATGCGGAGCTCGACCGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS CCA 90 bp TGCTTCAAGGATGAGGGCGGAGCTGGCTTCACTGGGGCACAGGGCTaGGGGCAGCCTCCAGTCTTGCCCTGCTGGGCCTTTCGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: CFKDEGGAGFTGAQG*GQPPVLPCWAFRLQ
Trigger: CTGGAGCCGAAAGGCCCAGCAGGGCAAGACTGGAGGCTGCCCCCAGCCCTGTGCCCCAGTGAAGCCAGCTCCGCCCTCATCCTTGAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS-3UTR CAA 90 bp GCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGCCCTGACTCTGCAGCCCTGGAGGGCACCGATGTaGAAGAGAACGCTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: APAPAPWLLLGAALTLQPWRAPM*KRTLPF
Trigger: GAAGGGCAGCGTTCTCTTCAACATCGGTGCCCTCCA...GGGCTGCAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS TCA 90 bp CACCACCTCCGCGTGTCTCCACCACCTGCATGGCTGCCCATTCACTaGCACAATGTAGTCGCCCTCCTTCAGGCCAGCCGCCGCGGCCTG +
Preference number: 5 (lower is better)
Translates to: HHLRVSPPPAWLPIH*HNVVALLQASRRGL
Trigger: CAGGCCGCGGCGGCTGGCCTGAAGGAGGGCGACTACATTGTGTCAGTGAATGGGCAGCCATGCAGGTGGTGGAGACACGCGGAGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS-3UTR CAA 90 bp AGAGCCTGGGATGCAGGGCAGGCTGCTCTCACCTGCGGACCCTCGGAAGGGACTGGCCTTTGGGGGCCATaGTCCACCCAGTACACGGAG +
Preference number: 5 (lower is better)
Translates to: RAWDAGQAALTCGPSEGTGLWGP*STQYTE
Trigger: CTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCC...AGTCCCTTCCGAGGGTCCGCAGGTGAGAGCAGCCTGCCCTGCATCCCAGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS GCA 90 bp GAGAGGCCCTCAAACACACATTCCTGGGCCTGGGCCATCATGAGCTaGTCCAGTGCGCAGAGGGACGCAGCGCTCATGTCTGGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: ERPSNTHSWAWAIMS*SSAQRDAALMSGLG
Trigger: GCCGAGCCCAGACATGAGCGCTGCGTCCCTCTGCGCACTGGAGCAGCTCATGATGGCCCAGGCCCAGGAATGTGTGTTTGAGGGCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS CCA 90 bp GGGGCCATGGAGGCAGGTGGTGAGAGGCCCTCAAACACACATTCCTaGGCCTGGGCCATCATGAGCTGCTCCAGTGCGCAGAGGGACGCA +
Preference number: 5 (lower is better)
Translates to: GAMEAGGERPSNTHS*AWAIMSCSSAQRDA
Trigger: TGCGTCCCTCTGCGCACTGGAGCAGCTCATGATGGCCCAGGCCCAGGAATGTGTGTTTGAGGGCCTCTCACCACCTGCCTCCATGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS-3UTR CAA 90 bp GCTCCGGCTCCGGCTCCGTGGCTCCTCTTGGGTGCAGCCCTGACTCTGCAGCCCACAGCAGGAAGTATTTaGGGGGAAGGCCATGTCTGG +
Preference number: 5 (lower is better)
Translates to: APAPAPWLLLGAALTLQPTAGSI*GEGHVW
Trigger: CCAGACATGGCCTTCCCCCAAAATACTTCCTGCTGT...GGGCTGCAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGCCGGAGCCGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CAA 90 bp TGCTCTCACCTGCGGACCCTCGGAAGGGACTGGACAAGAGGGCAGGGGTCTCGCGAGGTGGGGAGTCCCTaGCTCTGTGCACAGACAGGA +
Preference number: 5 (lower is better)
Translates to: CSHLRTLGRDWTRGQGSREVGSP*LCAQTG
Trigger: TCCTGTCTGTGCACAGAGCAAGGGACTCCCCACCTC...GCGAGACCCCTGCCCTCTTGTCCAGTCCCTTCCGAGGGTCCGCAGGTGAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS TCA 90 bp TTCTCAGCGCCCGTCCGCATCTGCAGCTCCTTGTCAATCTGCTGGTaGATCTGGGCCCTGCGGCTCTGCAGCTGGCCGCACTGGATCTGC +
Preference number: 5 (lower is better)
Translates to: FSAPVRICSSLSICW*IWALRLCSWPHWIC
Trigger: GCAGATCCAGTGCGGCCAGCTGCAGAGCCGCAGGGCCCAGATTCACCAGCAGATTGACAAGGAGCTGCAGATGCGGACGGGCGCTGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS TCA 90 bp GTGGTGAGAGGCCCTCAAACACACATTCCTGGGCCTGGGCCATCATaGGCTGCTCCAGTGCGCAGAGGGACGCAGCGCTCATGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VVRGPQTHIPGPGPS*AAPVRRGTQRSCLG
Trigger: GCCCAGACATGAGCGCTGCGTCCCTCTGCGCACTGGAGCAGCTCATGATGGCCCAGGCCCAGGAATGTGTGTTTGAGGGCCTCTCACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS GCA 90 bp CTCAAACACACATTCCTGGGCCTGGGCCATCATGAGCTGCTCCAGTaGGCAGAGGGACGCAGCGCTCATGTCTGGGCTCGGCGCATGGGA +
Preference number: 5 (lower is better)
Translates to: LKHTFLGLGHHELLQ*AEGRSAHVWARRMG
Trigger: TCCCATGCGCCGAGCCCAGACATGAGCGCTGCGTCCCTCTGCGCACTGGAGCAGCTCATGATGGCCCAGGCCCAGGAATGTGTGTTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS GCA 90 bp AAGTCATCCTCACGGTCGAGCTCCGCATACTTGGCCAGTGAGCGCTaGAGCGTCTGGGAGATCACAGCCCGAAGCAGGTCCACCTCGCGC +
Preference number: 5 (lower is better)
Translates to: KSSSRSSSAYLASER*SVWEITARSRSTSR
Trigger: GCGCGAGGTGGACCTGCTTCGGGCTGTGATCTCCCAGACGCTGCAGCGCTCACTGGCCAAGTATGCGGAGCTCGACCGTGAGGATGACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS CCA 90 bp CATCATGAGCTGCTCCAGTGCGCAGAGGGACGCAGCGCTCATGTCTaGGCTCGGCGCATGGGAGAAGTTCTCCCTCAGGAGGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: HHELLQCAEGRSAHV*ARRMGEVLPQEAEG
Trigger: GCCTTCAGCCTCCTGAGGGAGAACTTCTCCCATGCGCCGAGCCCAGACATGAGCGCTGCGTCCCTCTGCGCACTGGAGCAGCTCATGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS CCA 90 bp ATGGAGGCAGGTGGTGAGAGGCCCTCAAACACACATTCCTGGGCCTaGGCCATCATGAGCTGCTCCAGTGCGCAGAGGGACGCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: MEAGGERPSNTHSWA*AIMSCSSAQRDAAL
Trigger: GAGCGCTGCGTCCCTCTGCGCACTGGAGCAGCTCATGATGGCCCAGGCCCAGGAATGTGTGTTTGAGGGCCTCTCACCACCTGCCTCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS-3UTR CAA 90 bp CATTCTGCTGAGACAGGGATTTTCCCACAAGGGCAAGTGGGGGACCTGGACCCCGGGCATGCTCGGTGCTaGCTGCCAGCTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: HSAETGIFPQGQVGDLDPGHARC*LPAGAR
Trigger: CCTGGCTCCAGCTGGCAGCAAGCACCGAGCATGCCC...GGGGTCCAGGTCCCCCACTTGCCCTTGTGGGAAAATCCCTGTCTCAGCAGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS TCA 90 bp CCATGGCTACGTGGTAGTGGGCCAGGGAGCGGAAGTACTCGGCCTTaGCATGCACCAGGGCAGTCCAGGAGACAGGCACGTAGTCGTGGA +
Preference number: 5 (lower is better)
Translates to: PWLRGSGPGSGSTRP*HAPGQSRRQARSRG
Trigger: TCCACGACTACGTGCCTGTCTCCTGGACTGCCCTGGTGCATGTCAAGGCCGAGTACTTCCGCTCCCTGGCCCACTACCACGTAGCCATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS GCA 90 bp CCGATGTTGAAGAGAACGCTGCCCTTCTCGAAGGCCAGGGCACGCTaGTGGGCCGGGACCCCAGTAAGCGAGTCGTACCAGTGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: PMLKRTLPFSKARAR*WAGTPVSESYQWKK
Trigger: CTTCTTCCACTGGTACGACTCGCTTACTGGGGTCCCGGCCCAGCAGCGTGCCCTGGCCTTCGAGAAGGGCAGCGTTCTCTTCAACATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS CCA 90 bp CGGCAGCCTCACAGAAGTCATCCTCACGGTCGAGCTCCGCATACTTaGCCAGTGAGCGCTGCAGCGTCTGGGAGATCACAGCCCGAAGCA +
Preference number: 5 (lower is better)
Translates to: RQPHRSHPHGRAPHT*PVSAAASGRSQPEA
Trigger: TGCTTCGGGCTGTGATCTCCCAGACGCTGCAGCGCTCACTGGCCAAGTATGCGGAGCTCGACCGTGAGGATGACTTCTGTGAGGCTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS-3UTR CAA 90 bp TTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGGAAGCCGCCACCGGTTCTaGGCTGAGAACACAGACAGG +
Preference number: 5 (lower is better)
Translates to: FLPTAFGGHCPPSTRRPGSRHRF*AENTDR
Trigger: CCTGTCTGTGTTCTCAGCCAAGAACCGGTGGCGGCT...TCCAGGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CAA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTGAGGCGGGACAGGCATaGCCCGGAGGTCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: RGTGILLCVGEEATAPITEAGQA*PGGPLG
Trigger: ACCCAGAGGACCTCCGGGCAATGCCTGTCCCGCCTC...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CAA 90 bp GGTGTTCTTGCCGACGGCCTTTGGGGGCCATTGTCCACCCAGTACACGGAGGCCTGCACCCCCATTTTCTaGGCTGAAGCACGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: GVLADGLWGPLSTQYTEACTPIF*AEARGR
Trigger: CCTCCCTCGTGCTTCAGCCAAGAAAATGGGGGTGCA...GGCCTCCGTGTACTGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGAACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS TCA 90 bp GCGAGTCGTACCAGTGGAAGAAGAGCCCGAGGCTCCTGGCAGGGGTaGGGAAGCGCGCATCCAGGAAGCACAGCTGGTTGTAATAGGCTG +
Preference number: 5 (lower is better)
Translates to: ASRTSGRRARGSWQG*GSAHPGSTAGCNRL
Trigger: CAGCCTATTACAACCAGCTGTGCTTCCTGGATGCGCGCTTCCTCACCCCTGCCAGGAGCCTCGGGCTCTTCTTCCACTGGTACGACTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS TCA 90 bp CTCACAGAAGTCATCCTCACGGTCGAGCTCCGCATACTTGGCCAGTaGGCGCTGCAGCGTCTGGGAGATCACAGCCCGAAGCAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: LTEVILTVELRILGQ*ALQRLGDHSPKQVH
Trigger: GTGGACCTGCTTCGGGCTGTGATCTCCCAGACGCTGCAGCGCTCACTGGCCAAGTATGCGGAGCTCGACCGTGAGGATGACTTCTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS GCA 90 bp CCGCAGCCTTCAGCTCCGTCACCACCTCCGCGTGTCTCCACCACCTaGATGGCTGCCCATTCACTGACACAATGTAGTCGCCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: PQPSAPSPPPRVSTT*MAAHSLTQCSRPPS
Trigger: TGAAGGAGGGCGACTACATTGTGTCAGTGAATGGGCAGCCATGCAGGTGGTGGAGACACGCGGAGGTGGTGACGGAGCTGAAGGCTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS CCA 90 bp ATGTTGAAGAGAACGCTGCCCTTCTCGAAGGCCAGGGCACGCTGCTaGGCCGGGACCCCAGTAAGCGAGTCGTACCAGTGGAAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: MLKRTLPFSKARARC*AGTPVSESYQWKKS
Trigger: GCTCTTCTTCCACTGGTACGACTCGCTTACTGGGGTCCCGGCCCAGCAGCGTGCCCTGGCCTTCGAGAAGGGCAGCGTTCTCTTCAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS-3UTR CAA 90 bp CAGGAAGCTGACCTCAGACCGACAGAGGGACTGGCATCCTTCTGTGTGTGGGTGGACCAGTCCAGCTCCTaGGTCTCCTTCAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: QEADLRPTEGLASFCVWVDQSSS*VSFRPR
Trigger: CCTGGGCCTGAAGGAGACCAAGGAGCTGGACTGGTC...CACCCACACACAGAAGGATGCCAGTCCCTCTGTCGGTCTGAGGTCAGCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CAA 90 bp AGAGGGACTGGCATCCTTCTGTGTGTGGGTGAAGAGGCCACAGCTCCCATCACTCGCTTCAGGTGTGCCTaGCCAAGCTGCCTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: RGTGILLCVGEEATAPITRFRCA*PSCLRS
Trigger: GGAGCGCAGGCAGCTTGGCAAGGCACACCTGAAGCG...AGTGATGGGAGCTGTGGCCTCTTCACCCACACACAGAAGGATGCCAGTCCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CAA 90 bp CTGGGCAAACGGGACACTTGCTGGGTTGACCAGCACAGAGCCCATGATGACCAGCGGAAGTACTCGGCCTaGACATGCACCAGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: LGKRDTCWVDQHRAHDDQRKYSA*TCTRAV
Trigger: GACTGCCCTGGTGCATGTCAAGGCCGAGTACTTCCG...CTGGTCATCATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCCGTTTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CAA 90 bp TTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTCGAGCTCCGCATACTaGGCCAGTGAGCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: FINQINTCWGDLRDLGPFSSSAY*ASERCS
Trigger: GCTGCAGCGCTCACTGGCCAAGTATGCGGAGCTCGA...GAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CAA 90 bp TTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTTCTTGCCGACGGCCTTaGGGGGCCATTGTCCACCCA +
Preference number: 5 (lower is better)
Translates to: LLTKLTRAGETCVTLAHSSCRRP*GAIVHP
Trigger: TGGGTGGACAATGGCCCCCAAAGGCCGTCGGCAAGA...AGAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CAA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGCTGGAGGTGGTGTTCTaGCCGACGGCCTTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: STVLLTKLTRAGETCVTLLEVVF*PTAFGG
Trigger: GCCCCCAAAGGCCGTCGGCAAGAACACCACCTCCAG...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CAA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCTCCGTGGCTCCTCTaGGGTGCAGCCCTGACTCTG +
Preference number: 5 (lower is better)
Translates to: STVLLTKLTRAGETCVTLAPWLL*GAALTL
Trigger: CAGAGTCAGGGCTGCACCCAAGAGGAGCCACGGAGC...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CAA 90 bp TTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCTTTCTACCCGGGGTCTTaGCCTCAGCCCTCCCAAGGC +
Preference number: 5 (lower is better)
Translates to: LLTKLTRAGETCVTLAHSFYPGS*PQPSQG
Trigger: GCCTTGGGAGGGCTGAGGCAAAGACCCCGGGTAGAA...AGAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CAA 90 bp TCCACAGTTTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGGGACACTTGCTGGGTaGACCAGCACAGAGCCCATG +
Preference number: 5 (lower is better)
Translates to: STVLLTKLTRAGETCVTLGTLAG*TSTEPM
Trigger: CATGGGCTCTGTGCTGGTCAACCCAGCAAGTGTCCC...CAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAAACTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS-3UTR CAA 90 bp TTTATTAACCAAATTAACACGTGCTGGGGAGACCTGCGTGACCTTGGCCCATTCGAGACCTGCGTGACCTaGGCCCATTCTGCTGAGACA +
Preference number: 5 (lower is better)
Translates to: FINQINTCWGDLRDLGPFETCVT*AHSAET
Trigger: TGTCTCAGCAGAATGGGCCAAGGTCACGCAGGTCTC...GAATGGGCCAAGGTCACGCAGGTCTCCCCAGCACGTGTTAATTTGGTTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS CCA 72 bp GCCTCTCCTCCAGGATCATCGCCGCACCCGCTGCGCTaGGGGTCCCTCGGGGTCAGCCAGCCCGCCGCTCGC +
Preference number: 6 (lower is better)
Translates to: ASPPGSSPHPLR*GSLGVSQPAAR
Trigger: GCGAGCGGCGGGCTGGCTGACCCCGAGGGACCCCCAGCGCAGCGGGTGCGGCGATGATCCTGGAGGAGAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS CCA 72 bp ATAGCGCGGCGGGCACCCTCGGTGCAGGAGCGGTCCTaGCGCGCCCCAATCTGCGTGTGGAGGGCACCGATG +
Preference number: 6 (lower is better)
Translates to: IARRAPSVQERS*RAPICVWRAPM
Trigger: CATCGGTGCCCTCCACACGCAGATTGGGGCGCGCCAGGACCGCTCCTGCACCGAGGGTGCCCGCCGCGCTAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS GCA 72 bp CCCCAGGGCACTCCACCCATGGGCGCCTTACCAAGCTaGCTGCGCTCCTCCAGCTCCTGCGGCAGCACAGGG +
Preference number: 6 (lower is better)
Translates to: PQGTPPMGALPS*LRSSSSCGSTG
Trigger: CCCTGTGCTGCCGCAGGAGCTGGAGGAGCGCAGGCAGCTTGGTAAGGCGCCCATGGGTGGAGTGCCCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS GCA 72 bp GGGCCAGGGATGAGCTGCTCCCAGTGGTCTCCCACCTaGTCAGAGGCTGCCCAGCACTCCTGGGGCCCCTGC +
Preference number: 6 (lower is better)
Translates to: GPGMSCSQWSPT*SEAAQHSWGPC
Trigger: GCAGGGGCCCCAGGAGTGCTGGGCAGCCTCTGAGCAGGTGGGAGACCACTGGGAGCAGCTCATCCCTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS CCA 72 bp AGCGTGAGGCCAAAGCCGCCCTCTCCTCGGGTCAGGTaGACGGGCCCCACCAGCCGCCACCGGTTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: SVRPKPPSPRVR*TGPTSRHRFLA
Trigger: AGCCAAGAACCGGTGGCGGCTGGTGGGGCCCGTCCACCTGACCCGAGGAGAGGGCGGCTTTGGCCTCACGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS TCA 72 bp CTCCAGTCTTGCCCTGCTGGGCCTTTCGGCTCCAGTTaGGGAGGGGCCGGGGACTGGCCCACGTGGATGCCG +
Preference number: 6 (lower is better)
Translates to: LQSCPAGPFGSS*GGAGDWPTWMP
Trigger: CGGCATCCACGTGGGCCAGTCCCCGGCCCCTCCTCAACTGGAGCCGAAAGGCCCAGCAGGGCAAGACTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS CCA 72 bp GCGGGGCACTGGGATGTCACACACCATGTGGGCCCGTaGGCCCTGGGACGTGGCAGAAGGAGTGGGCAACGC +
Preference number: 6 (lower is better)
Translates to: AGHWDVTHHVGP*ALGRGRRSGQR
Trigger: GCGTTGCCCACTCCTTCTGCCACGTCCCAGGGCCCACGGGCCCACATGGTGTGTGACATCCCAGTGCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS GCA 72 bp CGCCTCCTCCTGCCCCAGGATGGCACGCTTCAGGTGTaGCTTGCCTGCACGCGGGGCACTGGGATGTCACAC +
Preference number: 6 (lower is better)
Translates to: RLLLPQDGTLQV*LACTRGTGMSH
Trigger: GTGTGACATCCCAGTGCCCCGCGTGCAGGCAAGGCACACCTGAAGCGTGCCATCCTGGGGCAGGAGGAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS CCA 72 bp CTCCCTCGGTCGCTGGGGAGCCGTCGCAGAGGGCCATaGCTACGTGGTAGTGGGCCAGGGAGCGGAAGTACT +
Preference number: 6 (lower is better)
Translates to: LPRSLGSRRRGP*LRGSGPGSGST
Trigger: AGTACTTCCGCTCCCTGGCCCACTACCACGTAGCCATGGCCCTCTGCGACGGCTCCCCAGCGACCGAGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289013.11
CDS CCA 72 bp GCTCTCCCTCGGTCGGGGAGCCGTCGCAGAGGGCCATaGCTACGTGGTAGTGGGCCAGGGAGCGGAAGTACT +
Preference number: 6 (lower is better)
Translates to: ALPRSGSRRRGP*LRGSGPGSGST
Trigger: AGTACTTCCGCTCCCTGGCCCACTACCACGTAGCCATGGCCCTCTGCGACGGCTCCCCGACCGAGGGAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS CCA 72 bp CACGCTTCAGGTGTGCCTTGCCTGCACGCGGGGCACTaGGATGTCACACACCATGTGGGCCCGTGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: HASGVPCLHAGH*DVTHHVGPWAL
Trigger: CAGGGCCCACGGGCCCACATGGTGTGTGACATCCCAGTGCCCCGCGTGCAGGCAAGGCACACCTGAAGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS CAA 90 bp GAGCGGTCCTGGCGCGCCCCAATCTGCGTGTGGAGGGCACCGATGTaGAAGAGAACGCTGCCCTTCTCGAAGGCCAGGGCACGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: ERSWRAPICVWRAPM*KRTLPFSKARARCW
Trigger: CCAGCAGCGTGCCCTGGCCTTCGAGAAGGGCAGCGTTCTCTTCAACATCGGTGCCCTCCACACGCAGATTGGGGCGCGCCAGGACCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS GCA 72 bp CCCTCGGTGCAGGAGCGGTCCTGGCGCGCCCCAATCTaGGTGTGGAGGGCACCGATGTTGAAGAGAACGCTG +
Preference number: 6 (lower is better)
Translates to: PSVQERSWRAPI*VWRAPMLKRTL
Trigger: CAGCGTTCTCTTCAACATCGGTGCCCTCCACACGCAGATTGGGGCGCGCCAGGACCGCTCCTGCACCGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS CCA 72 bp ACTGGGATGTCACACACCATGTGGGCCCGTGGGCCCTaGGACGTGGCAGAAGGAGTGGGCAACGCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: TGMSHTMWARGP*DVAEGVGNARA
Trigger: AGCCCTGGCGTTGCCCACTCCTTCTGCCACGTCCCAGGGCCCACGGGCCCACATGGTGTGTGACATCCCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS CCA 72 bp GTGGTGGGCACTCACGGGAGCCGTCGCAGAGGGCCATaGCTACGTGGTAGTGGGCCAGGGAGCGGAAGTACT +
Preference number: 6 (lower is better)
Translates to: VVGTHGSRRRGP*LRGSGPGSGST
Trigger: AGTACTTCCGCTCCCTGGCCCACTACCACGTAGCCATGGCCCTCTGCGACGGCTCCCGTGAGTGCCCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522335.5
CDS TCA 72 bp CCCGTCCGCATCTGCAGCTCCTTGTCAATCTGCTGGTaGATCTGGGCCCTGCGGCTCTGCAGCTGGCCGCAC +
Preference number: 6 (lower is better)
Translates to: PVRICSSLSICW*IWALRLCSWPH
Trigger: GTGCGGCCAGCTGCAGAGCCGCAGGGCCCAGATTCACCAGCAGATTGACAAGGAGCTGCAGATGCGGACGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS GCA 72 bp CTGCCCCAGGATGGCACGCTTCAGGTGTGCCTTGCCTaGACGCGGGGCACTGGGATGTCACACACCATGTGG +
Preference number: 6 (lower is better)
Translates to: LPQDGTLQVCLA*TRGTGMSHTMW
Trigger: CCACATGGTGTGTGACATCCCAGTGCCCCGCGTGCAGGCAAGGCACACCTGAAGCGTGCCATCCTGGGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS GCA 72 bp CCTCCTGCCCCAGGATGGCACGCTTCAGGTGTGCCTTaGCTGCACGCGGGGCACTGGGATGTCACACACCAT +
Preference number: 6 (lower is better)
Translates to: PPAPGWHASGVP*LHAGHWDVTHH
Trigger: ATGGTGTGTGACATCCCAGTGCCCCGCGTGCAGGCAAGGCACACCTGAAGCGTGCCATCCTGGGGCAGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS CCA 72 bp CAGAGGGACGCAGCGCTCATGTCTGGGCTCGGCGCATaGGAGAAGTTCTCCCTCAGGAGGCTGAAGGCCCCA +
Preference number: 6 (lower is better)
Translates to: QRDAALMSGLGA*EKFSLRRLKAP
Trigger: TGGGGCCTTCAGCCTCCTGAGGGAGAACTTCTCCCATGCGCCGAGCCCAGACATGAGCGCTGCGTCCCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS CCA 72 bp CTGCTCCAGTGCGCAGAGGGACGCAGCGCTCATGTCTaGGCTCGGCGCATGGGAGAAGTTCTCCCTCAGGAG +
Preference number: 6 (lower is better)
Translates to: LLQCAEGRSAHV*ARRMGEVLPQE
Trigger: CTCCTGAGGGAGAACTTCTCCCATGCGCCGAGCCCAGACATGAGCGCTGCGTCCCTCTGCGCACTGGAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS CCA 72 bp AGACAGGCACGTAGTCGTGGACGGGTGGCTGGGCCATaGTCCGGTGCACTAGCCTGTACTCGGCTGCCACCT +
Preference number: 6 (lower is better)
Translates to: RQARSRGRVAGP*SGALACTRLPP
Trigger: AGGTGGCAGCCGAGTACAGGCTAGTGCACCGGACCATGGCCCAGCCACCCGTCCACGACTACGTGCCTGTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS CAA 72 bp TCCTCCTGCCCCAGGATGGCACGCTTCAGGTGTGCCTaGCCTGCACGCGGGGCACTGGGATGTCACACACCA +
Preference number: 6 (lower is better)
Translates to: SSCPRMARFRCA*PARGALGCHTP
Trigger: TGGTGTGTGACATCCCAGTGCCCCGCGTGCAGGCAAGGCACACCTGAAGCGTGCCATCCTGGGGCAGGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522899.1
CDS TCA 72 bp GGCCCTCAAACACACATTCCTGGGCCTGGGCCATCATaGGCTGCTCCAGTGCGCAGAGGGACGCAGCGCTCA +
Preference number: 6 (lower is better)
Translates to: GPQTHIPGPGPS*AAPVRRGTQRS
Trigger: TGAGCGCTGCGTCCCTCTGCGCACTGGAGCAGCTCATGATGGCCCAGGCCCAGGAATGTGTGTTTGAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS TCA 72 bp CGTGGTAGTGGGCCAGGGAGCGGAAGTACTCGGCCTTaGCATGCACCAGGGCAGTCCAGGAGACAGGCACGT +
Preference number: 6 (lower is better)
Translates to: RGSGPGSGSTRP*HAPGQSRRQAR
Trigger: ACGTGCCTGTCTCCTGGACTGCCCTGGTGCATGTCAAGGCCGAGTACTTCCGCTCCCTGGCCCACTACCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS GCA 72 bp TCACGGTCGAGCTCCGCATACTTGGCCAGTGAGCGCTaGAGCGTCTGGGAGATCACAGCCCGAAGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SRSSSAYLASER*SVWEITARSRS
Trigger: GGACCTGCTTCGGGCTGTGATCTCCCAGACGCTGCAGCGCTCACTGGCCAAGTATGCGGAGCTCGACCGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS CAA 72 bp TGGCGCGCCCCAATCTGCGTGTGGAGGGCACCGATGTaGAAGAGAACGCTGCCCTTCTCGAAGGCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: WRAPICVWRAPM*KRTLPFSKARA
Trigger: TGCCCTGGCCTTCGAGAAGGGCAGCGTTCTCTTCAACATCGGTGCCCTCCACACGCAGATTGGGGCGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS CAA 90 bp TCGGCAGCCTCACAGAAGTCATCCTCACGGTCGAGCTCCGCATACTaGGCCAGTGAGCGCTGCAGCGTCTGGGAGATCACAGCCCGAAGC +
Preference number: 6 (lower is better)
Translates to: SAASQKSSSRSSSAY*ASERCSVWEITARS
Trigger: GCTTCGGGCTGTGATCTCCCAGACGCTGCAGCGCTCACTGGCCAAGTATGCGGAGCTCGACCGTGAGGATGACTTCTGTGAGGCTGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS TCA 72 bp ACCAGTGGAAGAAGAGCCCGAGGCTCCTGGCAGGGGTaGGGAAGCGCGCATCCAGGAAGCACAGCTGGTTGT +
Preference number: 6 (lower is better)
Translates to: TSGRRARGSWQG*GSAHPGSTAGC
Trigger: ACAACCAGCTGTGCTTCCTGGATGCGCGCTTCCTCACCCCTGCCAGGAGCCTCGGGCTCTTCTTCCACTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS TCA 72 bp GTCATCCTCACGGTCGAGCTCCGCATACTTGGCCAGTaGGCGCTGCAGCGTCTGGGAGATCACAGCCCGAAG +
Preference number: 6 (lower is better)
Translates to: VILTVELRILGQ*ALQRLGDHSPK
Trigger: CTTCGGGCTGTGATCTCCCAGACGCTGCAGCGCTCACTGGCCAAGTATGCGGAGCTCGACCGTGAGGATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS TCA 72 bp CGCGTGTCTCCACCACCTGCATGGCTGCCCATTCACTaGCACAATGTAGTCGCCCTCCTTCAGGCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: RVSPPPAWLPIH*HNVVALLQASR
Trigger: GCGGCTGGCCTGAAGGAGGGCGACTACATTGTGTCAGTGAATGGGCAGCCATGCAGGTGGTGGAGACACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS CCA 72 bp GAGGCAGGTGGTGAGAGGCCCTCAAACACACATTCCTaGGCCTGGGCCATCATGAGCTGCTCCAGTGCGCAG +
Preference number: 6 (lower is better)
Translates to: EAGGERPSNTHS*AWAIMSCSSAQ
Trigger: CTGCGCACTGGAGCAGCTCATGATGGCCCAGGCCCAGGAATGTGTGTTTGAGGGCCTCTCACCACCTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS GCA 72 bp TCAAACACACATTCCTGGGCCTGGGCCATCATGAGCTaGTCCAGTGCGCAGAGGGACGCAGCGCTCATGTCT +
Preference number: 6 (lower is better)
Translates to: SNTHSWAWAIMS*SSAQRDAALMS
Trigger: AGACATGAGCGCTGCGTCCCTCTGCGCACTGGAGCAGCTCATGATGGCCCAGGCCCAGGAATGTGTGTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS GCA 72 bp TCAGCTCCGTCACCACCTCCGCGTGTCTCCACCACCTaGATGGCTGCCCATTCACTGACACAATGTAGTCGC +
Preference number: 6 (lower is better)
Translates to: SAPSPPPRVSTT*MAAHSLTQCSR
Trigger: GCGACTACATTGTGTCAGTGAATGGGCAGCCATGCAGGTGGTGGAGACACGCGGAGGTGGTGACGGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS CCA 72 bp CACAGAAGTCATCCTCACGGTCGAGCTCCGCATACTTaGCCAGTGAGCGCTGCAGCGTCTGGGAGATCACAG +
Preference number: 6 (lower is better)
Translates to: HRSHPHGRAPHT*PVSAAASGRSQ
Trigger: CTGTGATCTCCCAGACGCTGCAGCGCTCACTGGCCAAGTATGCGGAGCTCGACCGTGAGGATGACTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1
CDS CAA 72 bp ATCAGCTCCTTCAGCGGTGTAGACCAGTCCAGCTCCTaGGTCTCCTTCAGGCCCAGGGGGATCATGGGGACA +
Preference number: 6 (lower is better)
Translates to: ISSFSGVDQSSS*VSFRPRGIMGT
Trigger: TGTCCCCATGATCCCCCTGGGCCTGAAGGAGACCAAGGAGCTGGACTGGTCTACACCGCTGAAGGAGCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS CAA 90 bp TGCACTGAGATCAGCTCCTTCAGCGGTGTAGACCAGTCCAGCTCCTaGGTCTCCTTCAGGCCCAGGGGGATCATGGGGACAGTGACAGCT +
Preference number: 6 (lower is better)
Translates to: CTEISSFSGVDQSSS*VSFRPRGIMGTVTA
Trigger: AGCTGTCACTGTCCCCATGATCCCCCTGGGCCTGAAGGAGACCAAGGAGCTGGACTGGTCTACACCGCTGAAGGAGCTGATCTCAGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289013.11
ENST00000522335.5
CDS CAA 72 bp TCACAGAAGTCATCCTCACGGTCGAGCTCCGCATACTaGGCCAGTGAGCGCTGCAGCGTCTGGGAGATCACA +
Preference number: 6 (lower is better)
Translates to: SQKSSSRSSSAY*ASERCSVWEIT
Trigger: TGTGATCTCCCAGACGCTGCAGCGCTCACTGGCCAAGTATGCGGAGCTCGACCGTGAGGATGACTTCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289013.11
ENST00000522335.5
ENST00000522899.1