Pregenerated sensors for RHOV (Homo sapiens)
Ensembl gene IDs: ENSG00000104140Ensembl transcript IDs: ENST00000220507.5
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCATGTCCCCCGAGTGTTCAGAAGGGAACTGAGTCCTATGAGGTaGCCAGGCCCTGCCAGTAGCTGCCGCAAAGGCCCGGGTGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: AHVPRVFRRELSPMR*PGPASSCRKGPGAP Trigger: TGGGGCACCCGGGCCTTTGCGGCAGCTACTGGCAGGGCCTGGCCACCTCATAGGACTCAGTTCCCTTCTGAACACTCGGGGGACATGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR GCA 90 bp | AGAAGGGAACTGAGTCCTATGAGGTGGCCAGGCCCTGCCAGTAGCTaGCGCAAAGGCCCGGGTGCCCCAGGTCTCAGAAGTCTTTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: RRELSPMRWPGPASS*RKGPGAPGLRSLWP Trigger: AGGCCAAAGACTTCTGAGACCTGGGGCACCCGGGCCTTTGCGGCAGCTACTGGCAGGGCCTGGCCACCTCATAGGACTCAGTTCCCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR TCA 90 bp | TCTTTCTCACCCCTGTGCCAAGGAAGGGTCCTAATTCAGCCAGGCTaGCCTGAGGGCCCAGGACAAGAAACTGGGTTCCCAAACTGCTCG | + |
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Preference number: 1 (lower is better) Translates to: SFSPLCQGRVLIQPG*PEGPGQETGFPNCS Trigger: CGAGCAGTTTGGGAACCCAGTTTCTTGTCCTGGGCCCTCAGGTCAGCCTGGCTGAATTAGGACCCTTCCTTGGCACAGGGGTGAGAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR TCA 90 bp | CTGAGGGCCCAGGACAAGAAACTGGGTTCCCAAACTGCTCGGAGGTaGCTGACCCTGTTAGGACCATCCCATGAAAATCAAAGTGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LRAQDKKLGSQTARR*LTLLGPSHENQSAR Trigger: CCTGGCACTTTGATTTTCATGGGATGGTCCTAACAGGGTCAGTCACCTCCGAGCAGTTTGGGAACCCAGTTTCTTGTCCTGGGCCCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR GCA 90 bp | CAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTaGTCGCTCTCTCAATCTCTCGCCCACTCCATCCCAAACTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: QALSTISPRLQDLFS*SLSQSLAHSIPNFS Trigger: AGAGAAGTTTGGGATGGAGTGGGCGAGAGATTGAGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR-3UTR GCA 90 bp | GCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTGGCCCTGCCAGTAGCTaGCGCAAAGGCCCGGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: ALSTISPRLQDLFSCSLSGPASS*RKGPGA Trigger: GGCACCCGGGCCTTTGCGGCAGCTACTGGCAGGGCC...AGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCCAAACTGCTCGGAGGTaGCTGACCCTGTTAGGACCA | + |
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Preference number: 2 (lower is better) Translates to: FPGLIHHQSQAPRPLFLLQTARR*LTLLGP Trigger: TGGTCCTAACAGGGTCAGTCACCTCCGAGCAGTTTG...GAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCCAGGCATATCAGAGTaGGCAGTTAGAGGCCCATGT | + |
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Preference number: 2 (lower is better) Translates to: RPYPPSVPGSKTSFPARSPGISE*AVRGPC Trigger: ACATGGGCCTCTAACTGCCCACTCTGATATGCCTGG...AGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACTTCTCTCCAAATCGGGGTTGAGCCCCTTCCAGCCCTCCATAATGCCACCCAGGACAAGAAACTaGGTTCCCAAACTGCTCGGA | + |
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Preference number: 2 (lower is better) Translates to: PKLLSKSGLSPFQPSIMPPRTRN*VPKLLG Trigger: TCCGAGCAGTTTGGGAACCCAGTTTCTTGTCCTGGG...TGGCATTATGGAGGGCTGGAAGGGGCTCAACCCCGATTTGGAGAGAAGTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR-3UTR GCA 90 bp | TATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTCAATACTGGGTTCCCAAACTaGTCGGAGGTGACTGACCCT | + |
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Preference number: 2 (lower is better) Translates to: YPPSVPGSKTSFPARSLNTGFPN*SEVTDP Trigger: AGGGTCAGTCACCTCCGAGCAGTTTGGGAACCCAGT...ATTGAGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR-3UTR GCA 90 bp | CCCAAACTTCTCTCCAAATCGGGGTTGAGCCCCTTCCAGCCCTCCATAATGCCATCTTTCTCACCCCTGTaGCAAGGAAGGGTCCTAATT | + |
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Preference number: 2 (lower is better) Translates to: PKLLSKSGLSPFQPSIMPSFSPL*QGRVLI Trigger: AATTAGGACCCTTCCTTGGCACAGGGGTGAGAAAGA...TGGCATTATGGAGGGCTGGAAGGGGCTCAACCCCGATTTGGAGAGAAGTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR-3UTR TCA 90 bp | CGCTCTCTCAATCTCTCGCCCACTCCATCCCAAACTTCTCTCCAAATCGGGGTTGTTAGGACCATCCCATaGAAATCAAAGTGCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: RSLNLSPTPSQTSLQIGVVRTIP*KSKCQV Trigger: AACCTGGCACTTTGATTTTCATGGGATGGTCCTAAC...AACCCCGATTTGGAGAGAAGTTTGGGATGGAGTGGGCGAGAGATTGAGAGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR-3UTR TCA 90 bp | TCATCTTCTTTCCAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTTTTTCTGTGAGCTTTaGCTGGAGAAATCCAAATCA | + |
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Preference number: 2 (lower is better) Translates to: SSSFQALSTISPRLQDLFFFCEL*LEKSKS Trigger: TGATTTGGATTTCTCCAGTCAAAGCTCACAGAAAAA...AAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTGGAAAGAAGATGA 44% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR GCA 72 bp | CTGAGTCCTATGAGGTGGCCAGGCCCTGCCAGTAGCTaGCGCAAAGGCCCGGGTGCCCCAGGTCTCAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: LSPMRWPGPASS*RKGPGAPGLRS Trigger: ACTTCTGAGACCTGGGGCACCCGGGCCTTTGCGGCAGCTACTGGCAGGGCCTGGCCACCTCATAGGACTCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR CCA 72 bp | CCCCGAGTGTTCAGAAGGGAACTGAGTCCTATGAGGTaGCCAGGCCCTGCCAGTAGCTGCCGCAAAGGCCCG | + |
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Preference number: 3 (lower is better) Translates to: PRVFRRELSPMR*PGPASSCRKGP Trigger: CGGGCCTTTGCGGCAGCTACTGGCAGGGCCTGGCCACCTCATAGGACTCAGTTCCCTTCTGAACACTCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR GCA 72 bp | CCTGAGGGCCCAGGACAAGAAACTGGGTTCCCAAACTaGTCGGAGGTGACTGACCCTGTTAGGACCATCCCA | + |
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Preference number: 3 (lower is better) Translates to: PEGPGQETGFPN*SEVTDPVRTIP Trigger: TGGGATGGTCCTAACAGGGTCAGTCACCTCCGAGCAGTTTGGGAACCCAGTTTCTTGTCCTGGGCCCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR GCA 72 bp | TCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTaGTCGCTCTCTCAATCTCTCGCCCACTCCATCCCA | + |
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Preference number: 3 (lower is better) Translates to: STISPRLQDLFS*SLSQSLAHSIP Trigger: TGGGATGGAGTGGGCGAGAGATTGAGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR-3UTR CAA 90 bp | AGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCCTCCTGCCTACTACTaGCTATGCAGCCATAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: RPYPPSVPGSKTSFPARSPPAYY*LCSHSC Trigger: GCAGCTATGGCTGCATAGCAAGTAGTAGGCAGGAGG...AGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR TCA 72 bp | CAGGACAAGAAACTGGGTTCCCAAACTGCTCGGAGGTaGCTGACCCTGTTAGGACCATCCCATGAAAATCAA | + |
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Preference number: 3 (lower is better) Translates to: QDKKLGSQTARR*LTLLGPSHENQ Trigger: TTGATTTTCATGGGATGGTCCTAACAGGGTCAGTCACCTCCGAGCAGTTTGGGAACCCAGTTTCTTGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | CCGCCCTCCCTGGCCTTGGGGATTGAGGGCAGCCCAGGTGTCAGCCTGCTCCTCGCCCAGGTGTCAGCCTaGTCCTCATCCACCCCACTT | + |
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Preference number: 4 (lower is better) Translates to: PPSLALGIEGSPGVSLLLAQVSA*SSSTPL Trigger: AAGTGGGGTGGATGAGGAGCAGGCTGACACCTGGGC...GAGGAGCAGGCTGACACCTGGGCTGCCCTCAATCCCCAAGGCCAGGGAGGGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CCA 90 bp | CATGTCCCCCGAGTGTTCAGAAGGGAACTGAGTCCTATGAGGTGGCCAGGCCCTCTTGATGCCCAGCTCTaGGGGCGCGCTACGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: HVPRVFRRELSPMRWPGPLDAQL*GRATPP Trigger: CGGCGGCGTAGCGCGCCCCCAGAGCTGGGCATCAAG...AGGGCCTGGCCACCTCATAGGACTCAGTTCCCTTCTGAACACTCGGGGGACATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CCA 90 bp | GGCCCATGTCCCCCGAGTGTTCAGAAGGGAACTGAGTCCTATGAGGTGGCCAGGCGCCCTCCCTGGCCTTaGGGATTGAGGGCAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GPCPPSVQKGTESYEVARRPPWP*GLRAAQ Trigger: CTGGGCTGCCCTCAATCCCCAAGGCCAGGGAGGGCG...CCTGGCCACCTCATAGGACTCAGTTCCCTTCTGAACACTCGGGGGACATGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR TCA 90 bp | CACCCAGGCATATCAGAGTGGGCAGTTAGAGGCCCATGTCCCCCGAGTGTTCAGTTCTCGGCCAGACCCTaGGCCTGGGGTTGGGGCACG | + |
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Preference number: 4 (lower is better) Translates to: HPGISEWAVRGPCPPSVQFSARP*AWGWGT Trigger: CGTGCCCCAACCCCAGGCTCAGGGTCTGGCCGAGAA...CTGAACACTCGGGGGACATGGGCCTCTAACTGCCCACTCTGATATGCCTGGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | GCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTGGCGCCTGGGGGTTGTaGGTGCGGATCTCGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ALSTISPRLQDLFSCSLSGAWGL*VRISGS Trigger: GCTGCCCGAGATCCGCACGCACAACCCCCAGGCGCC...AGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | CGCTCTCTCAATCTCTCGCCCACTCCATCCCAAACTTCTCTCCAAATCGGGGTTGGCCCTGCCAGTAGCTaGCGCAAAGGCCCGGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RSLNLSPTPSQTSLQIGVGPASS*RKGPGA Trigger: GGCACCCGGGCCTTTGCGGCAGCTACTGGCAGGGCC...AACCCCGATTTGGAGAGAAGTTTGGGATGGAGTGGGCGAGAGATTGAGAGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CCA 90 bp | ATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTCAATCAGGTGTCCAGCGCAGTaGGCCGGTAGCGCGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: IHHQSQAPRPLFLLALSIRCPAQ*AGSARG Trigger: ACCCCGCGCGCTACCGGCCCACTGCGCTGGACACCT...GATTGAGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CCA 90 bp | GGCCCATGTCCCCCGAGTGTTCAGAAGGGAACTGAGTCCTATGAGGTGGCCAGGTTCCTGCCCCACTCCTaGCTCAGCCAGTTTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GPCPPSVQKGTESYEVARFLPHS*LSQFGQ Trigger: CTGCCCAAACTGGCTGAGCCAGGAGTGGGGCAGGAA...CCTGGCCACCTCATAGGACTCAGTTCCCTTCTGAACACTCGGGGGACATGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR TCA 90 bp | CACCCAGGCATATCAGAGTGGGCAGTTAGAGGCCCATGTCCCCCGAGTGTTCAGTGGGCTGCACCACGCTaGAGCACGCCAGGAAGACAT | + |
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Preference number: 4 (lower is better) Translates to: HPGISEWAVRGPCPPSVQWAAPR*STPGRH Trigger: ATGTCTTCCTGGCGTGCTTCAGCGTGGTGCAGCCCA...CTGAACACTCGGGGGACATGGGCCTCTAACTGCCCACTCTGATATGCCTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | CACCCAGGCATATCAGAGTGGGCAGTTAGAGGCCCATGTCCCCCGAGTGTTCAGGGCAGCGGGAGAGGGTaGGCACACCTTTGGCATTCA | + |
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Preference number: 4 (lower is better) Translates to: HPGISEWAVRGPCPPSVQGSGRG*AHLWHS Trigger: TGAATGCCAAAGGTGTGCGCACCCTCTCCCGCTGCC...CTGAACACTCGGGGGACATGGGCCTCTAACTGCCCACTCTGATATGCCTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CCA 90 bp | GCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTAGCAGCACAGGCGCCTaGGGGTTGTGCGTGCGGATC | + |
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Preference number: 4 (lower is better) Translates to: ALSTISPRLQDLFSCSLSSSTGA*GLCVRI Trigger: GATCCGCACGCACAACCCCCAGGCGCCTGTGCTGCT...AGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR TCA 90 bp | GGGCAGTTAGAGGCCCATGTCCCCCGAGTGTTCAGAAGGGAACTGAGTCCTATGTCAGCCAGGCTGACCTaGGGGCCCAGGACAAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: GQLEAHVPRVFRRELSPMSARLT*GPRTRN Trigger: GTTTCTTGTCCTGGGCCCTCAGGTCAGCCTGGCTGA...CATAGGACTCAGTTCCCTTCTGAACACTCGGGGGACATGGGCCTCTAACTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CCA 90 bp | GCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTCTGGCTCAGCCAGTTTaGGCAGTGCCTAGGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: ALSTISPRLQDLFSCSLSLAQPV*AVPREP Trigger: GGGCTCCCTAGGCACTGCCCAAACTGGCTGAGCCAG...AGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | GCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTAGCCAGTTTGGGCAGTaGCTAGGGAGCCCAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: ALSTISPRLQDLFSCSLSSQFGQ*LGSPET Trigger: GGTCTCTGGGCTCCCTAGGCACTGCCCAAACTGGCT...AGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR TCA 90 bp | ATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTCAATCTCTCCAAATCGGGGTTaGGCCCCTTCCAGCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IHHQSQAPRPLFLLALSISPNRG*APSSPP Trigger: TGGAGGGCTGGAAGGGGCTCAACCCCGATTTGGAGA...GATTGAGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | CAGTTAGAGGCCCATGTCCCCCGAGTGTTCAGAAGGGAACTGAGTCCTATGAGGTGTCCCAGAGCTCAATaGGCACCGGAGCTCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: QLEAHVPRVFRRELSPMRCPRAQ*APELHP Trigger: TGGATGGAGCTCCGGTGCGCATTGAGCTCTGGGACA...CCTCATAGGACTCAGTTCCCTTCTGAACACTCGGGGGACATGGGCCTCTAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | GTCATCTTCTTTCCAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTCCTGGGGGTTGTGCGTaGGGATCTCGGGCAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: VIFFPGLIHHQSQAPRPLPGGCA*GSRAAI Trigger: AATGGCTGCCCGAGATCCGCACGCACAACCCCCAGG...AAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTGGAAAGAAGATGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CCA 90 bp | CATGTCCCCCGAGTGTTCAGAAGGGAACTGAGTCCTATGAGGTGGCCAGGCCCTCCAGGCATATCAGAGTaGGCAGTTAGAGGCCCATGT | + |
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Preference number: 4 (lower is better) Translates to: HVPRVFRRELSPMRWPGPPGISE*AVRGPC Trigger: ACATGGGCCTCTAACTGCCCACTCTGATATGCCTGG...AGGGCCTGGCCACCTCATAGGACTCAGTTCCCTTCTGAACACTCGGGGGACATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| 3UTR CAA 72 bp | CGCCCACTCCATCCCAAACTTCTCTCCAAATCGGGGTaGAGCCCCTTCCAGCCCTCCATAATGCCAAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: RPLHPKLLSKSG*SPFQPSIMPSV Trigger: AACGCTTGGCATTATGGAGGGCTGGAAGGGGCTCAACCCCGATTTGGAGAGAAGTTTGGGATGGAGTGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR TCA 90 bp | ATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTCAATCCCTTTTGCTGGGCCTTaGCTCTCACTTCCTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: IHHQSQAPRPLFLLALSIPFAGP*LSLPAP Trigger: TGGGGCAGGAAGTGAGAGTCAAGGCCCAGCAAAAGG...GATTGAGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | CCTGAGGGCCCAGGACAAGAAACTGGGTTCCCAAACTGCTCGGAGGTGACTGACCTCCTGCCTACTACTTaGTATGCAGCCATAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PEGPGQETGFPNCSEVTDLLPTT*YAAIAA Trigger: AGCAGCTATGGCTGCATAGCAAGTAGTAGGCAGGAG...GTCAGTCACCTCCGAGCAGTTTGGGAACCCAGTTTCTTGTCCTGGGCCCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CCA 90 bp | CCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTCTCCCCCTCCTTTTGCTaGGCCTTGACTCTCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: PYPPSVPGSKTSFPARSLSPSFC*ALTLTS Trigger: GGAAGTGAGAGTCAAGGCCCAGCAAAAGGAGGGGGA...GAGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR TCA 90 bp | CCATCCCAAACTTCTCTCCAAATCGGGGTTGAGCCCCTTCCAGCCCTCCATAATCTTCTGCGTCAAGGCTaGGCACTCAAGGTAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSQTSLQIGVEPLPALHNLLRQG*ALKVAA Trigger: TGCTGCTACCTTGAGTGCTCAGCCTTGACGCAGAAG...ATTATGGAGGGCTGGAAGGGGCTCAACCCCGATTTGGAGAGAAGTTTGGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR TCA 90 bp | CGCTCTCTCAATCTCTCGCCCACTCCATCCCAAACTTCTCTCCAAATCGGGGTTCAAACTGCTCGGAGGTaGCTGACCCTGTTAGGACCA | + |
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Preference number: 4 (lower is better) Translates to: RSLNLSPTPSQTSLQIGVQTARR*LTLLGP Trigger: TGGTCCTAACAGGGTCAGTCACCTCCGAGCAGTTTG...AACCCCGATTTGGAGAGAAGTTTGGGATGGAGTGGGCGAGAGATTGAGAGAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | CCTGAGGGCCCAGGACAAGAAACTGGGTTCCCAAACTGCTCGGAGGTGACTGACGCCTACTACTTGCTATaGAGCCATAGCTGCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: PEGPGQETGFPNCSEVTDAYYLL*SHSCSN Trigger: GTTTGAGCAGCTATGGCTGCATAGCAAGTAGTAGGC...GTCAGTCACCTCCGAGCAGTTTGGGAACCCAGTTTCTTGTCCTGGGCCCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | CCATCCCAAACTTCTCTCCAAATCGGGGTTGAGCCCCTTCCAGCCCTCCATAATTCCTCCCCCTCCTTTTaGTGGGCCTTGACTCTCACT | + |
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Preference number: 4 (lower is better) Translates to: PSQTSLQIGVEPLPALHNSSPSF*WALTLT Trigger: AGTGAGAGTCAAGGCCCAGCAAAAGGAGGGGGAGGA...ATTATGGAGGGCTGGAAGGGGCTCAACCCCGATTTGGAGAGAAGTTTGGGATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | CATGTCCCCCGAGTGTTCAGAAGGGAACTGAGTCCTATGAGGTGGCCAGGCCCTCTTCAGGTTCTAATTTaGAGCTCCTCCCCCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: HVPRVFRRELSPMRWPGPLQVLI*SSSPSF Trigger: AAAGGAGGGGGAGGAGCTGCAAATTAGAACCTGAAG...AGGGCCTGGCCACCTCATAGGACTCAGTTCCCTTCTGAACACTCGGGGGACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CCA 90 bp | TCATCTTCTTTCCAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTCTGAGTCCTATGAGGTaGCCAGGCCCTGCCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SSSFQALSTISPRLQDLFLSPMR*PGPASS Trigger: GCTACTGGCAGGGCCTGGCCACCTCATAGGACTCAG...AAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTGGAAAGAAGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CCA 90 bp | GAAACTGGGTTCCCAAACTGCTCGGAGGTGACTGACCCTGTTAGGACCATCCCACCCAGGACAAGAAACTaGGTTCCCAAACTGCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETGFPNCSEVTDPVRTIPPRTRN*VPKLLG Trigger: TCCGAGCAGTTTGGGAACCCAGTTTCTTGTCCTGGG...TGGGATGGTCCTAACAGGGTCAGTCACCTCCGAGCAGTTTGGGAACCCAGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR TCA 90 bp | AGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTTTCTCTGTGATGTTTTaGAAGGAGCTGGGCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RPYPPSVPGSKTSFPARSFSVMF*KELGCT Trigger: GGTGCAGCCCAGCTCCTTTCAAAACATCACAGAGAA...AGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR TCA 90 bp | CCATCCCAAACTTCTCTCCAAATCGGGGTTGAGCCCCTTCCAGCCCTCCATAATGCTGAATTAGTACGTTaGCATCGTCCCTCAGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSQTSLQIGVEPLPALHNAELVR*HRPSGR Trigger: CCGACCTGAGGGACGATGTCAACGTACTAATTCAGC...ATTATGGAGGGCTGGAAGGGGCTCAACCCCGATTTGGAGAGAAGTTTGGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | GTCATCTTCTTTCCAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTCCATCCACCAGGACTTaGACAGAGAAGGTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VIFFPGLIHHQSQAPRPLPSTRT*TEKVSS Trigger: GCTGGACACCTTCTCTGTGCAAGTCCTGGTGGATGG...AAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTGGAAAGAAGATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | GTCATCTTCTTTCCAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTACTGGGTTCCCAAACTaGTCGGAGGTGACTGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: VIFFPGLIHHQSQAPRPLTGFPN*SEVTDP Trigger: AGGGTCAGTCACCTCCGAGCAGTTTGGGAACCCAGT...AAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTGGAAAGAAGATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | CGTCATCTTCTTTCCAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTCCAGCCGGGCTTTGTaGTCAATGGCACTGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLSRPYPPSVPGSKTSSSRAL*SMALRI Trigger: TATTCTCAGTGCCATTGAGCACAAAGCCCGGCTGGA...AGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTGGAAAGAAGATGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | AGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTTCTTTCTCACCCCTGTaGCAAGGAAGGGTCCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: RPYPPSVPGSKTSFPARSSFSPL*QGRVLI Trigger: AATTAGGACCCTTCCTTGGCACAGGGGTGAGAAAGA...AGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CCA 90 bp | CGTCATCTTCTTTCCAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTGGGTGCGCACACCTTTaGCATTCAGTTTCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLSRPYPPSVPGSKTSGCAHL*HSVSSP Trigger: TGGAGAAGAAACTGAATGCCAAAGGTGTGCGCACCC...AGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTGGAAAGAAGATGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CCA 90 bp | CTCTCGCCCACTCCATCCCAAACTTCTCTCCAAATCGGGGTTGAGCCCCTTCCATCTGTGAGCTTTGACTaGAGAAATCCAAATCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPTPSQTSLQIGVEPLPSVSFD*RNPNQS Trigger: GCTCTGATTTGGATTTCTCCAGTCAAAGCTCACAGA...TGGAAGGGGCTCAACCCCGATTTGGAGAGAAGTTTGGGATGGAGTGGGCGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR TCA 90 bp | CCATCCCAAACTTCTCTCCAAATCGGGGTTGAGCCCCTTCCAGCCCTCCATAATGTTAGGACCATCCCATaGAAATCAAAGTGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSQTSLQIGVEPLPALHNVRTIP*KSKCQV Trigger: AACCTGGCACTTTGATTTTCATGGGATGGTCCTAAC...ATTATGGAGGGCTGGAAGGGGCTCAACCCCGATTTGGAGAGAAGTTTGGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | CCATCCCAAACTTCTCTCCAAATCGGGGTTGAGCCCCTTCCAGCCCTCCATAATCTATGCAGCCATAGCTaGTCAAACGAAGCAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSQTSLQIGVEPLPALHNLCSHS*SNEAEE Trigger: TTCTTCTGCTTCGTTTGAGCAGCTATGGCTGCATAG...ATTATGGAGGGCTGGAAGGGGCTCAACCCCGATTTGGAGAGAAGTTTGGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | TATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTCAATCAAGACCTCTTTTCCTaGTCGCTCTCTCAATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YPPSVPGSKTSFPARSLNQDLFS*SLSQSL Trigger: GAGAGATTGAGAGAGCGAGCAGGAAAAGAGGTCTTG...ATTGAGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR GCA 90 bp | GTCATCTTCTTTCCAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTTATTTGCAGACTCTaGACTGCTCTAGCTTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIFFPGLIHHQSQAPRPLFICRL*TALASR Trigger: CCTAGAAGCTAGAGCAGTGCAGAGTCTGCAAATAAA...AAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTGGAAAGAAGATGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR TCA 90 bp | TATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTCAATTTTTTCTGTGAGCTTTaGCTGGAGAAATCCAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: YPPSVPGSKTSFPARSLNFFCEL*LEKSKS Trigger: TGATTTGGATTTCTCCAGTCAAAGCTCACAGAAAAA...ATTGAGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CAA 90 bp | CATGTCCCCCGAGTGTTCAGAAGGGAACTGAGTCCTATGAGGTGGCCAGGCCCTCCGCCCTCCCTGGCCTaGGGGATTGAGGGCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HVPRVFRRELSPMRWPGPPPSLA*GIEGSP Trigger: TGGGCTGCCCTCAATCCCCAAGGCCAGGGAGGGCGG...AGGGCCTGGCCACCTCATAGGACTCAGTTCCCTTCTGAACACTCGGGGGACATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CAA 90 bp | CCCAAACTTCTCTCCAAATCGGGGTTGAGCCCCTTCCAGCCCTCCATAATGCCAACAGGCGCCTGGGGGTaGTGCGTGCGGATCTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PKLLSKSGLSPFQPSIMPTGAWG*CVRISG Trigger: GCCCGAGATCCGCACGCACAACCCCCAGGCGCCTGT...TGGCATTATGGAGGGCTGGAAGGGGCTCAACCCCGATTTGGAGAGAAGTTTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CAA 90 bp | CGTCATCTTCTTTCCAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTCCCACCAGCACGCACTaGATGCCCAGCTCTGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RHLLSRPYPPSVPGSKTSPTSTH*MPSSGG Trigger: GCCCCCAGAGCTGGGCATCAAGTGCGTGCTGGTGGG...AGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTGGAAAGAAGATGACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CAA 90 bp | GGCCCATGTCCCCCGAGTGTTCAGAAGGGAACTGAGTCCTATGAGGTGGCCAGGCCTCCTGCCTACTACTaGCTATGCAGCCATAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPCPPSVQKGTESYEVARPPAYY*LCSHSC Trigger: GCAGCTATGGCTGCATAGCAAGTAGTAGGCAGGAGG...CCTGGCCACCTCATAGGACTCAGTTCCCTTCTGAACACTCGGGGGACATGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CAA 90 bp | GGGCAGTTAGAGGCCCATGTCCCCCGAGTGTTCAGAAGGGAACTGAGTCCTATGCTCCTCCCCCTCCTTTaGCTGGGCCTTGACTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GQLEAHVPRVFRRELSPMLLPLL*LGLDSH Trigger: GTGAGAGTCAAGGCCCAGCAAAAGGAGGGGGAGGAG...CATAGGACTCAGTTCCCTTCTGAACACTCGGGGGACATGGGCCTCTAACTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS TCA 90 bp | GGGTTGTGCGTGCGGATCTCGGGCAGCCATTTCTCTGTGATGTTTTaGAAGGAGCTGGGCTGCACCACGCTGAAGCACGCCAGGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GLCVRISGSHFSVMF*KELGCTTLKHARKT Trigger: TGTCTTCCTGGCGTGCTTCAGCGTGGTGCAGCCCAGCTCCTTTCAAAACATCACAGAGAAATGGCTGCCCGAGATCCGCACGCACAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS CCA 90 bp | AGAAGAACTTCTTCCAGCGGCAGCGGGAGAGGGTGCGCACACCTTTaGCATTCAGTTTCTTCTCCAGCCGGGCTTTGTGCTCAATGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RRTSSSGSGRGCAHL*HSVSSPAGLCAQWH Trigger: GTGCCATTGAGCACAAAGCCCGGCTGGAGAAGAAACTGAATGCCAAAGGTGTGCGCACCCTCTCCCGCTGCCGCTGGAAGAAGTTCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CAA 90 bp | CCCAAACTTCTCTCCAAATCGGGGTTGAGCCCCTTCCAGCCCTCCATAATGCCATCCTTTTGCTGGGCCTaGACTCTCACTTCCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PKLLSKSGLSPFQPSIMPSFCWA*TLTSCP Trigger: GGGGCAGGAAGTGAGAGTCAAGGCCCAGCAAAAGGA...TGGCATTATGGAGGGCTGGAAGGGGCTCAACCCCGATTTGGAGAGAAGTTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS GCA 90 bp | CTCAAACGAAGCAGAAGAACTTCTTCCAGCGGCAGCGGGAGAGGGTaGGCACACCTTTGGCATTCAGTTTCTTCTCCAGCCGGGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LKRSRRTSSSGSGRG*AHLWHSVSSPAGLC Trigger: ACAAAGCCCGGCTGGAGAAGAAACTGAATGCCAAAGGTGTGCGCACCCTCTCCCGCTGCCGCTGGAAGAAGTTCTTCTGCTTCGTTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CAA 90 bp | TCATCTTCTTTCCAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTCTCTCCAAATCGGGGTaGAGCCCCTTCCAGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSFQALSTISPRLQDLFLSKSG*SPFQPS Trigger: GGAGGGCTGGAAGGGGCTCAACCCCGATTTGGAGAG...AAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTGGAAAGAAGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CAA 90 bp | CGCTCTCTCAATCTCTCGCCCACTCCATCCCAAACTTCTCTCCAAATCGGGGTTTCCATCCACCAGGACTaGCACAGAGAAGGTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSLNLSPTPSQTSLQIGVSIHQD*HREGVQ Trigger: CTGGACACCTTCTCTGTGCAAGTCCTGGTGGATGGA...AACCCCGATTTGGAGAGAAGTTTGGGATGGAGTGGGCGAGAGATTGAGAGAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CAA 90 bp | GCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTCCTTCAGGTTCTAATTaGCAGCTCCTCCCCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ALSTISPRLQDLFSCSLSPSGSN*QLLPLL Trigger: AAGGAGGGGGAGGAGCTGCAAATTAGAACCTGAAGG...AGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS GCA 90 bp | AGAAGTCTTTGGCCTCCTGCCTACTACTTGCTATGCAGCCATAGCTaGTCAAACGAAGCAGAAGAACTTCTTCCAGCGGCAGCGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSLWPPAYYLLCSHS*SNEAEELLPAAAGE Trigger: CTCTCCCGCTGCCGCTGGAAGAAGTTCTTCTGCTTCGTTTGAGCAGCTATGGCTGCATAGCAAGTAGTAGGCAGGAGGCCAAAGACTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS TCA 90 bp | AATAGCCGAGTCAAATACTTCCTTCAAGTTCTTCTGCGTCAAGGCTaGGCACTCAAGGTAGCAGCAGGCTCGGATCTTCTCGGCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: NSRVKYFLQVLLRQG*ALKVAAGSDLLGQT Trigger: GGTCTGGCCGAGAAGATCCGAGCCTGCTGCTACCTTGAGTGCTCAGCCTTGACGCAGAAGAACTTGAAGGAAGTATTTGACTCGGCTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CAA 90 bp | TCATCTTCTTTCCAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTTCTCCAGCCGGGCTTaGTGCTCAATGGCACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSFQALSTISPRLQDLFFSSRA*CSMALR Trigger: TCTCAGTGCCATTGAGCACAAAGCCCGGCTGGAGAA...AAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTGGAAAGAAGATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CAA 90 bp | TATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCCTGCTCGCTCTCTCAATAGGGTGCGCACACCTTaGGCATTCAGTTTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YPPSVPGSKTSFPARSLNRVRTP*AFSFFS Trigger: GGAGAAGAAACTGAATGCCAAAGGTGTGCGCACCCT...ATTGAGAGAGCGAGCAGGAAAAGAGGTCTTGGAGCCTGGGACTGATGGTGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CAA 90 bp | CGTCATCTTCTTTCCAGGCCTTATCCACCATCAGTCCCAGGCTCCAAGACCTCTTTTCTCTGTGATGTTTaGAAAGGAGCTGGGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RHLLSRPYPPSVPGSKTSFLCDV*KGAGLH Trigger: GTGCAGCCCAGCTCCTTTCAAAACATCACAGAGAAA...AGAGGTCTTGGAGCCTGGGACTGATGGTGGATAAGGCCTGGAAAGAAGATGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS GCA 90 bp | GTGCGCACACCTTTGGCATTCAGTTTCTTCTCCAGCCGGGCTTTGTaGTCAATGGCACTGAGAATAGCCGAGTCAAATACTTCCTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VRTPLAFSFFSSRAL*SMALRIAESNTSFK Trigger: CTTGAAGGAAGTATTTGACTCGGCTATTCTCAGTGCCATTGAGCACAAAGCCCGGCTGGAGAAGAAACTGAATGCCAAAGGTGTGCGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS-3UTR CAA 90 bp | CAGTTAGAGGCCCATGTCCCCCGAGTGTTCAGAAGGGAACTGAGTCCTATGAGGGACTTAAGGTTTTATTaGCAGACTCTGCACTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QLEAHVPRVFRRELSPMRDLRFY*QTLHCS Trigger: AGAGCAGTGCAGAGTCTGCAAATAAAACCTTAAGTC...CCTCATAGGACTCAGTTCCCTTCTGAACACTCGGGGGACATGGGCCTCTAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS CCA 72 bp | CCACCAGGACTTGCACAGAGAAGGTGTCCAGCGCAGTaGGCCGGTAGCGCGCGGGGTACCCATTGCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PPGLAQRRCPAQ*AGSARGTHCRC Trigger: ACACCTGCAATGGGTACCCCGCGCGCTACCGGCCCACTGCGCTGGACACCTTCTCTGTGCAAGTCCTGGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS CCA 72 bp | TCTTCCAGCGGCAGCGGGAGAGGGTGCGCACACCTTTaGCATTCAGTTTCTTCTCCAGCCGGGCTTTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSGSGRGCAHL*HSVSSPAGLCA Trigger: AGCACAAAGCCCGGCTGGAGAAGAAACTGAATGCCAAAGGTGTGCGCACCCTCTCCCGCTGCCGCTGGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS CAA 72 bp | TTCTTCCAGCGGCAGCGGGAGAGGGTGCGCACACCTTaGGCATTCAGTTTCTTCTCCAGCCGGGCTTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: FFQRQRERVRTP*AFSFFSSRALC Trigger: GCACAAAGCCCGGCTGGAGAAGAAACTGAATGCCAAAGGTGTGCGCACCCTCTCCCGCTGCCGCTGGAAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS CAA 90 bp | GGGGTTGTGCGTGCGGATCTCGGGCAGCCATTTCTCTGTGATGTTTaGAAAGGAGCTGGGCTGCACCACGCTGAAGCACGCCAGGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GVVRADLGQPFLCDV*KGAGLHHAEARQED Trigger: GTCTTCCTGGCGTGCTTCAGCGTGGTGCAGCCCAGCTCCTTTCAAAACATCACAGAGAAATGGCTGCCCGAGATCCGCACGCACAACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS TCA 72 bp | GTGCGGATCTCGGGCAGCCATTTCTCTGTGATGTTTTaGAAGGAGCTGGGCTGCACCACGCTGAAGCACGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRISGSHFSVMF*KELGCTTLKHA Trigger: GGCGTGCTTCAGCGTGGTGCAGCCCAGCTCCTTTCAAAACATCACAGAGAAATGGCTGCCCGAGATCCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS CAA 72 bp | CGTGCGGATCTCGGGCAGCCATTTCTCTGTGATGTTTaGAAAGGAGCTGGGCTGCACCACGCTGAAGCACGC | + |
|
Preference number: 6 (lower is better) Translates to: RADLGQPFLCDV*KGAGLHHAEAR Trigger: GCGTGCTTCAGCGTGGTGCAGCCCAGCTCCTTTCAAAACATCACAGAGAAATGGCTGCCCGAGATCCGCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS CAA 90 bp | CAGAAGAACTTCTTCCAGCGGCAGCGGGAGAGGGTGCGCACACCTTaGGCATTCAGTTTCTTCTCCAGCCGGGCTTTGTGCTCAATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QKNFFQRQRERVRTP*AFSFFSSRALCSMA Trigger: TGCCATTGAGCACAAAGCCCGGCTGGAGAAGAAACTGAATGCCAAAGGTGTGCGCACCCTCTCCCGCTGCCGCTGGAAGAAGTTCTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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| CDS GCA 72 bp | AGCAGAAGAACTTCTTCCAGCGGCAGCGGGAGAGGGTaGGCACACCTTTGGCATTCAGTTTCTTCTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRRTSSSGSGRG*AHLWHSVSSPA Trigger: GGCTGGAGAAGAAACTGAATGCCAAAGGTGTGCGCACCCTCTCCCGCTGCCGCTGGAAGAAGTTCTTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
||
| CDS GCA 72 bp | TGGCCTCCTGCCTACTACTTGCTATGCAGCCATAGCTaGTCAAACGAAGCAGAAGAACTTCTTCCAGCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WPPAYYLLCSHS*SNEAEELLPAA Trigger: TGCCGCTGGAAGAAGTTCTTCTGCTTCGTTTGAGCAGCTATGGCTGCATAGCAAGTAGTAGGCAGGAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
||
| CDS CAA 90 bp | AGGGTGCGCACACCTTTGGCATTCAGTTTCTTCTCCAGCCGGGCTTaGTGCTCAATGGCACTGAGAATAGCCGAGTCAAATACTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RVRTPLAFSFFSSRA*CSMALRIAESNTSF Trigger: GAAGGAAGTATTTGACTCGGCTATTCTCAGTGCCATTGAGCACAAAGCCCGGCTGGAGAAGAAACTGAATGCCAAAGGTGTGCGCACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
||
| CDS TCA 72 bp | GTCAAATACTTCCTTCAAGTTCTTCTGCGTCAAGGCTaGGCACTCAAGGTAGCAGCAGGCTCGGATCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VKYFLQVLLRQG*ALKVAAGSDLL Trigger: GAGAAGATCCGAGCCTGCTGCTACCTTGAGTGCTCAGCCTTGACGCAGAAGAACTTGAAGGAAGTATTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
||
| CDS GCA 72 bp | CCTTTGGCATTCAGTTTCTTCTCCAGCCGGGCTTTGTaGTCAATGGCACTGAGAATAGCCGAGTCAAATACT | + |
|
Preference number: 6 (lower is better) Translates to: PLAFSFFSSRAL*SMALRIAESNT Trigger: AGTATTTGACTCGGCTATTCTCAGTGCCATTGAGCACAAAGCCCGGCTGGAGAAGAAACTGAATGCCAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
||
| CDS CAA 72 bp | ACACCTTTGGCATTCAGTTTCTTCTCCAGCCGGGCTTaGTGCTCAATGGCACTGAGAATAGCCGAGTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: TPLAFSFFSSRA*CSMALRIAESN Trigger: ATTTGACTCGGCTATTCTCAGTGCCATTGAGCACAAAGCCCGGCTGGAGAAGAAACTGAATGCCAAAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220507.5 |
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