Pregenerated sensors for RHOQ (Homo sapiens)
Ensembl gene IDs: ENSG00000119729Ensembl transcript IDs: ENST00000238738.9, ENST00000489448.1, ENST00000489471.5, ENST00000494370.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCATTCTGTTGGAGGTGAGGTGTGGCAGCTGTTTAAAAGAATGTaGGTGGTGGTATGTATGTGTTTGAGAACAAAGAGCCATACTGAA | + |
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Preference number: 1 (lower is better) Translates to: WHSVGGEVWQLFKRM*VVVCMCLRTKSHTE Trigger: TTCAGTATGGCTCTTTGTTCTCAAACACATACATACCACCACGCACATTCTTTTAAACAGCTGCCACACCTCACCTCCAACAGAATGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| 3UTR-3UTR TCA 90 bp | CAAAACCCATTAATCCAAGCTCCACTTATTGTAAATAGAATTCACCATGAGCTAAGGGTTTCAGAGATATaGATTGGAGCCCCCTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: QNPLIQAPLIVNRIHHELRVSEI*IGAPSP Trigger: GGGGGAGGGGGCTCCAATTCATATCTCTGAAACCCT...TAGCTCATGGTGAATTCTATTTACAATAAGTGGAGCTTGGATTAATGGGTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| 3UTR-3UTR CCA 90 bp | CATTCTGTTGGAGGTGAGGTGTGGCAGCTGTTTAAAAGAATGTGCGTGGTGGTATCCCCAAAGGCAAGTTaGAAATGTGTAATAGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: HSVGGEVWQLFKRMCVVVSPKAS*KCVIVY Trigger: GTAAACTATTACACATTTCCAACTTGCCTTTGGGGA...TACCACCACGCACATTCTTTTAAACAGCTGCCACACCTCACCTCCAACAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| 3UTR-3UTR CCA 90 bp | CATTCTGTTGGAGGTGAGGTGTGGCAGCTGTTTAAAAGAATGTGCGTGGTGGTAAAGTTCATTCATACATaGCCTTATTTGAGGCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: HSVGGEVWQLFKRMCVVVKFIHT*PYLRQC Trigger: ACACTGCCTCAAATAAGGCCATGTATGAATGAACTT...TACCACCACGCACATTCTTTTAAACAGCTGCCACACCTCACCTCCAACAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| 3UTR CAA 90 bp | ATAATGAGGAAACCAAATCCCAGTCAAGAAACAGGTGACACCAGTTaGTGTAGACAAATTCCTAATCTGTTTCTGTTAGGGCAGGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: IMRKPNPSQETGDTS*CRQIPNLFLLGQGK Trigger: TTTGCCCTGCCCTAACAGAAACAGATTAGGAATTTGTCTACACAAACTGGTGTCACCTGTTTCTTGACTGGGATTTGGTTTCCTCATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| 3UTR-3UTR CAA 90 bp | CATTCTGTTGGAGGTGAGGTGTGGCAGCTGTTTAAAAGAATGTGCGTGGTGGTAACAGGTGACACCAGTTaGTGTAGACAAATTCCTAAT | + |
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Preference number: 3 (lower is better) Translates to: HSVGGEVWQLFKRMCVVVTGDTS*CRQIPN Trigger: ATTAGGAATTTGTCTACACAAACTGGTGTCACCTGT...TACCACCACGCACATTCTTTTAAACAGCTGCCACACCTCACCTCCAACAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| 3UTR-3UTR CAA 90 bp | CATTCTGTTGGAGGTGAGGTGTGGCAGCTGTTTAAAAGAATGTGCGTGGTGGTACATACATGGCCTTATTaGAGGCAGTGTATTTGTATT | + |
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Preference number: 3 (lower is better) Translates to: HSVGGEVWQLFKRMCVVVHTWPY*RQCICI Trigger: AATACAAATACACTGCCTCAAATAAGGCCATGTATG...TACCACCACGCACATTCTTTTAAACAGCTGCCACACCTCACCTCCAACAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| 3UTR CCA 72 bp | ACATTTCATTTTTGGCATTCTGTTGGAGGTGAGGTGTaGCAGCTGTTTAAAAGAATGTGCGTGGTGGTATGT | + |
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Preference number: 3 (lower is better) Translates to: TFHFWHSVGGEV*QLFKRMCVVVC Trigger: ACATACCACCACGCACATTCTTTTAAACAGCTGCCACACCTCACCTCCAACAGAATGCCAAAAATGAAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| 3UTR-3UTR CAA 90 bp | GACGTTGGAGATCTCTGTTCTACCTCCCATATTTATAATGAGGAAACCAAATCCATCCCCAAAGGCAAGTaGGAAATGTGTAATAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: DVGDLCSTSHIYNEETKSIPKGK*EMCNSL Trigger: TAAACTATTACACATTTCCAACTTGCCTTTGGGGAT...GGATTTGGTTTCCTCATTATAAATATGGGAGGTAGAACAGAGATCTCCAACGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR CCA 90 bp | CATTCTGTTGGAGGTGAGGTGTGGCAGCTGTTTAAAAGAATGTGCGTGGTGGTATTTAGTAACCCAAATTaGAATCTAGCTGGGATTCAT | + |
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Preference number: 4 (lower is better) Translates to: HSVGGEVWQLFKRMCVVVFSNPN*NLAGIH Trigger: ATGAATCCCAGCTAGATTCCAATTTGGGTTACTAAA...TACCACCACGCACATTCTTTTAAACAGCTGCCACACCTCACCTCCAACAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR TCA 90 bp | GACGTTGGAGATCTCTGTTCTACCTCCCATATTTATAATGAGGAAACCAAATCCTGGTATGTATGTGTTTaGGAACAAAGAGCCATACTG | + |
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Preference number: 4 (lower is better) Translates to: DVGDLCSTSHIYNEETKSWYVCV*EQRAIL Trigger: CAGTATGGCTCTTTGTTCTCAAACACATACATACCA...GGATTTGGTTTCCTCATTATAAATATGGGAGGTAGAACAGAGATCTCCAACGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| 3UTR CAA 72 bp | AAACCAAATCCCAGTCAAGAAACAGGTGACACCAGTTaGTGTAGACAAATTCCTAATCTGTTTCTGTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: KPNPSQETGDTS*CRQIPNLFLLG Trigger: CCCTAACAGAAACAGATTAGGAATTTGTCTACACAAACTGGTGTCACCTGTTTCTTGACTGGGATTTGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR TCA 90 bp | GACGTTGGAGATCTCTGTTCTACCTCCCATATTTATAATGAGGAAACCAAATCCAGCCTAAGCTTTGAATaGAGACATGCTTCTGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: DVGDLCSTSHIYNEETKSSLSFE*RHASEN Trigger: ATTTTCAGAAGCATGTCTTCATTCAAAGCTTAGGCT...GGATTTGGTTTCCTCATTATAAATATGGGAGGTAGAACAGAGATCTCCAACGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR CCA 90 bp | CAAAACCCATTAATCCAAGCTCCACTTATTGTAAATAGAATTCACCATGAGCTAGTTGGAGGTGAGGTGTaGCAGCTGTTTAAAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: QNPLIQAPLIVNRIHHELVGGEV*QLFKRM Trigger: CATTCTTTTAAACAGCTGCCACACCTCACCTCCAAC...TAGCTCATGGTGAATTCTATTTACAATAAGTGGAGCTTGGATTAATGGGTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR TCA 90 bp | CAAAACCCATTAATCCAAGCTCCACTTATTGTAAATAGAATTCACCATGAGCTACACATTTTAATTTGCTaGTGGCATGCACTTCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: QNPLIQAPLIVNRIHHELHILIC*WHALLD Trigger: ATCAAGAAGTGCATGCCATCAGCAAATTAAAATGTG...TAGCTCATGGTGAATTCTATTTACAATAAGTGGAGCTTGGATTAATGGGTTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR GCA 90 bp | ATTACTGTGAATAAGAAAATTACTGTGATAAATGGGAGAGACGTTGGAGATCTCCTGTTTAAAAGAATGTaGGTGGTGGTATGTATGTGT | + |
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Preference number: 4 (lower is better) Translates to: ITVNKKITVINGRDVGDLLFKRM*VVVCMC Trigger: ACACATACATACCACCACGCACATTCTTTTAAACAG...GAGATCTCCAACGTCTCTCCCATTTATCACAGTAATTTTCTTATTCACAGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR CCA 90 bp | CAAAACCCATTAATCCAAGCTCCACTTATTGTAAATAGAATTCACCATGAGCTATCCCCAAAGGCAAGTTaGAAATGTGTAATAGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: QNPLIQAPLIVNRIHHELSPKAS*KCVIVY Trigger: GTAAACTATTACACATTTCCAACTTGCCTTTGGGGA...TAGCTCATGGTGAATTCTATTTACAATAAGTGGAGCTTGGATTAATGGGTTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR CCA 90 bp | ATTACTGTGAATAAGAAAATTACTGTGATAAATGGGAGAGACGTTGGAGATCTCAATTACTGTGATAAATaGGAGAGACGTTGGAGATCT | + |
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Preference number: 4 (lower is better) Translates to: ITVNKKITVINGRDVGDLNYCDK*ERRWRS Trigger: AGATCTCCAACGTCTCTCCCATTTATCACAGTAATT...GAGATCTCCAACGTCTCTCCCATTTATCACAGTAATTTTCTTATTCACAGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR CCA 90 bp | ATTACTGTGAATAAGAAAATTACTGTGATAAATGGGAGAGACGTTGGAGATCTCAAGTTCATTCATACATaGCCTTATTTGAGGCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: ITVNKKITVINGRDVGDLKFIHT*PYLRQC Trigger: ACACTGCCTCAAATAAGGCCATGTATGAATGAACTT...GAGATCTCCAACGTCTCTCCCATTTATCACAGTAATTTTCTTATTCACAGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS TCA 90 bp | CTGAACGAAAGAGCAGAGTCCCTGCTGTGTGGCGTCCACATGTGCTaGCATCTGCTGGGTAAGAGGCACAGGGGAGGGAATACAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LNERAESLLCGVHMC*HLLGKRHRGGNTEQ Trigger: CTGCTCTGTATTCCCTCCCCTGTGCCTCTTACCCAGCAGATGTCAGCACATGTGGACGCCACACAGCAGGGACTCTGCTCTTTCGTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489448.1 |
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| CDS CCA 90 bp | GAGCAGAGTCCCTGCTGTGTGGCGTCCACATGTGCTGACATCTGCTaGGTAAGAGGCACAGGGGAGGGAATACAGAGCAGATGGTTGCAA | + |
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Preference number: 5 (lower is better) Translates to: EQSPCCVASTCADIC*VRGTGEGIQSRWLQ Trigger: TTGCAACCATCTGCTCTGTATTCCCTCCCCTGTGCCTCTTACCCAGCAGATGTCAGCACATGTGGACGCCACACAGCAGGGACTCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489448.1 |
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| CDS GCA 90 bp | AAAGAGCAGAGTCCCTGCTGTGTGGCGTCCACATGTGCTGACATCTaGTGGGTAAGAGGCACAGGGGAGGGAATACAGAGCAGATGGTTG | + |
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Preference number: 5 (lower is better) Translates to: KEQSPCCVASTCADI*WVRGTGEGIQSRWL Trigger: CAACCATCTGCTCTGTATTCCCTCCCCTGTGCCTCTTACCCAGCAGATGTCAGCACATGTGGACGCCACACAGCAGGGACTCTGCTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489448.1 |
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| CDS TCA 90 bp | AGCAGTGAGGGATACCTAGGGGAAGAGCTCCAGGCAGATAGATCCTaGTGCAGGAGCATGCCTGGAGCAGTCAAGGAACAAGATCACACT | + |
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Preference number: 5 (lower is better) Translates to: SSEGYLGEELQADRS*CRSMPGAVKEQDHT Trigger: AGTGTGATCTTGTTCCTTGACTGCTCCAGGCATGCTCCTGCATCAGGATCTATCTGCCTGGAGCTCTTCCCCTAGGTATCCCTCACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489448.1 |
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| CDS TCA 90 bp | GATCCTGGCCACTGGAAACCCATGCTCTCGTATGGAAGGAAAACGTaGTCACGTGACCCCAGGATCCAGATGAAACAGAAATCTCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: DPGHWKPMLSYGRKT*SRDPRIQMKQKSPP Trigger: GGGAGGAGATTTCTGTTTCATCTGGATCCTGGGGTCACGTGATCACGTTTTCCTTCCATACGAGAGCATGGGTTTCCAGTGGCCAGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489471.5 |
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| CDS CCA 90 bp | AACAGTAAGACAGCGGATGCTGGAGCTAGTGGACACAACAGATCCTaGCCACTGGAAACCCATGCTCTCGTATGGAAGGAAAACGTGATC | + |
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Preference number: 5 (lower is better) Translates to: NSKTADAGASGHNRS*PLETHALVWKENVI Trigger: GATCACGTTTTCCTTCCATACGAGAGCATGGGTTTCCAGTGGCCAGGATCTGTTGTGTCCACTAGCTCCAGCATCCGCTGTCTTACTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489471.5 |
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| CDS TCA 90 bp | CCACTGGAAACCCATGCTCTCGTATGGAAGGAAAACGTGATCACGTaGCCCCAGGATCCAGATGAAACAGAAATCTCCTCCCAGAAATCC | + |
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Preference number: 5 (lower is better) Translates to: PLETHALVWKENVIT*PQDPDETEISSQKS Trigger: GGATTTCTGGGAGGAGATTTCTGTTTCATCTGGATCCTGGGGTCACGTGATCACGTTTTCCTTCCATACGAGAGCATGGGTTTCCAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489471.5 |
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| CDS CCA 90 bp | CTTTGGACTGAAACCCAACTCTGCCATTTATTACCTGCAGGATCTTaGGCGAATTATCTGACATCTCCCAGCCTCCACTGTCTCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: LWTETQLCHLLPAGS*ANYLTSPSLHCLFC Trigger: ACAGAAGAGACAGTGGAGGCTGGGAGATGTCAGATAATTCGCCCAAGATCCTGCAGGTAATAAATGGCAGAGTTGGGTTTCAGTCCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494370.1 |
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| CDS-3UTR CAA 90 bp | CATTCTGTTGGAGGTGAGGTGTGGCAGCTGTTTAAAAGAATGTGCGTGGTGGTAATCCCCAAAGGCAAGTaGGAAATGTGTAATAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: HSVGGEVWQLFKRMCVVVIPKGK*EMCNSL Trigger: TAAACTATTACACATTTCCAACTTGCCTTTGGGGAT...TACCACCACGCACATTCTTTTAAACAGCTGCCACACCTCACCTCCAACAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR CAA 90 bp | CAAAACCCATTAATCCAAGCTCCACTTATTGTAAATAGAATTCACCATGAGCTAACAGGTGACACCAGTTaGTGTAGACAAATTCCTAAT | + |
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Preference number: 5 (lower is better) Translates to: QNPLIQAPLIVNRIHHELTGDTS*CRQIPN Trigger: ATTAGGAATTTGTCTACACAAACTGGTGTCACCTGT...TAGCTCATGGTGAATTCTATTTACAATAAGTGGAGCTTGGATTAATGGGTTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR CAA 90 bp | CAAAACCCATTAATCCAAGCTCCACTTATTGTAAATAGAATTCACCATGAGCTAGCAATTAAAAAGCTCTaGATAAGCAATGGGGAACTC | + |
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Preference number: 5 (lower is better) Translates to: QNPLIQAPLIVNRIHHELAIKKL*ISNGEL Trigger: GAGTTCCCCATTGCTTATCAAGAGCTTTTTAATTGC...TAGCTCATGGTGAATTCTATTTACAATAAGTGGAGCTTGGATTAATGGGTTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR CAA 90 bp | ATTACTGTGAATAAGAAAATTACTGTGATAAATGGGAGAGACGTTGGAGATCTCATAGGGACTCATACTTaGCCAATGATTAGTAGACTC | + |
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Preference number: 5 (lower is better) Translates to: ITVNKKITVINGRDVGDLIGTHT*PMISRL Trigger: GAGTCTACTAATCATTGGCAAAGTATGAGTCCCTAT...GAGATCTCCAACGTCTCTCCCATTTATCACAGTAATTTTCTTATTCACAGTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR CAA 90 bp | ATTACTGTGAATAAGAAAATTACTGTGATAAATGGGAGAGACGTTGGAGATCTCGTGGTATGTATGTGTTaGAGAACAAAGAGCCATACT | + |
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Preference number: 5 (lower is better) Translates to: ITVNKKITVINGRDVGDLVVCMC*RTKSHT Trigger: AGTATGGCTCTTTGTTCTCAAACACATACATACCAC...GAGATCTCCAACGTCTCTCCCATTTATCACAGTAATTTTCTTATTCACAGTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS-3UTR CAA 90 bp | CAAAACCCATTAATCCAAGCTCCACTTATTGTAAATAGAATTCACCATGAGCTACATACATGGCCTTATTaGAGGCAGTGTATTTGTATT | + |
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Preference number: 5 (lower is better) Translates to: QNPLIQAPLIVNRIHHELHTWPY*RQCICI Trigger: AATACAAATACACTGCCTCAAATAAGGCCATGTATG...TAGCTCATGGTGAATTCTATTTACAATAAGTGGAGCTTGGATTAATGGGTTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238738.9 |
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| CDS GCA 72 bp | AGTCCCTGCTGTGTGGCGTCCACATGTGCTGACATCTaGTGGGTAAGAGGCACAGGGGAGGGAATACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: SPCCVASTCADI*WVRGTGEGIQS Trigger: GCTCTGTATTCCCTCCCCTGTGCCTCTTACCCAGCAGATGTCAGCACATGTGGACGCCACACAGCAGGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489448.1 |
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| CDS TCA 72 bp | GGATACCTAGGGGAAGAGCTCCAGGCAGATAGATCCTaGTGCAGGAGCATGCCTGGAGCAGTCAAGGAACAA | + |
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Preference number: 6 (lower is better) Translates to: GYLGEELQADRS*CRSMPGAVKEQ Trigger: TTGTTCCTTGACTGCTCCAGGCATGCTCCTGCATCAGGATCTATCTGCCTGGAGCTCTTCCCCTAGGTATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489448.1 |
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| CDS CCA 72 bp | ACAGCGGATGCTGGAGCTAGTGGACACAACAGATCCTaGCCACTGGAAACCCATGCTCTCGTATGGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: TADAGASGHNRS*PLETHALVWKE Trigger: TTCCTTCCATACGAGAGCATGGGTTTCCAGTGGCCAGGATCTGTTGTGTCCACTAGCTCCAGCATCCGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489471.5 |
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| CDS TCA 72 bp | AAGCACTGTTTAGGTCCTGGGGATATGTCAGTGAACTaGACGAAAGAGCAGAGTCCCTGCTGTGTGGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: KHCLGPGDMSVN*TKEQSPCCVAS Trigger: GGACGCCACACAGCAGGGACTCTGCTCTTTCGTTCAGTTCACTGACATATCCCCAGGACCTAAACAGTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489448.1 |
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| CDS GCA 72 bp | AAGAGCTCCAGGCAGATAGATCCTGATGCAGGAGCATaGCTGGAGCAGTCAAGGAACAAGATCACACTGAGG | + |
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Preference number: 6 (lower is better) Translates to: KSSRQIDPDAGA*LEQSRNKITLR Trigger: CCTCAGTGTGATCTTGTTCCTTGACTGCTCCAGGCATGCTCCTGCATCAGGATCTATCTGCCTGGAGCTCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489448.1 |
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| CDS TCA 72 bp | ACCCATGCTCTCGTATGGAAGGAAAACGTGATCACGTaGCCCCAGGATCCAGATGAAACAGAAATCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: THALVWKENVIT*PQDPDETEISS Trigger: GGAGGAGATTTCTGTTTCATCTGGATCCTGGGGTCACGTGATCACGTTTTCCTTCCATACGAGAGCATGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489471.5 |
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| CDS GCA 72 bp | GGCCCAGGAGTCAGGCTTTGGACTGAAACCCAACTCTaGCATTTATTACCTGCAGGATCTTGGGCGAATTAT | + |
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Preference number: 6 (lower is better) Translates to: GPGVRLWTETQL*HLLPAGSWANY Trigger: ATAATTCGCCCAAGATCCTGCAGGTAATAAATGGCAGAGTTGGGTTTCAGTCCAAAGCCTGACTCCTGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494370.1 |
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| CDS CCA 72 bp | CAAAGGTGTAAGAGTCTCGGCCCAGGAGTCAGGCTTTaGACTGAAACCCAACTCTGCCATTTATTACCTGCA | + |
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Preference number: 6 (lower is better) Translates to: QRCKSLGPGVRL*TETQLCHLLPA Trigger: TGCAGGTAATAAATGGCAGAGTTGGGTTTCAGTCCAAAGCCTGACTCCTGGGCCGAGACTCTTACACCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494370.1 |
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| CDS TCA 72 bp | CACTGGAAACCCATGCTCTCGTATGGAAGGAAAACGTaGTCACGTGACCCCAGGATCCAGATGAAACAGAAA | + |
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Preference number: 6 (lower is better) Translates to: HWKPMLSYGRKT*SRDPRIQMKQK Trigger: TTTCTGTTTCATCTGGATCCTGGGGTCACGTGATCACGTTTTCCTTCCATACGAGAGCATGGGTTTCCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489471.5 |
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| CDS CCA 72 bp | TGGGTATCTACTATATGTCAAGCACTGTTTAGGTCCTaGGGATATGTCAGTGAACTGAACGAAAGAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: WVSTICQALFRS*GYVSELNERAE Trigger: CTCTGCTCTTTCGTTCAGTTCACTGACATATCCCCAGGACCTAAACAGTGCTTGACATATAGTAGATACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489448.1 |
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