RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RHOH (Homo sapiens)

Ensembl gene IDs: ENSG00000168421

Ensembl transcript IDs: ENST00000381799.10, ENST00000503754.5, ENST00000503941.5, ENST00000503978.1, ENST00000504638.1, ENST00000505618.5, ENST00000507851.5, ENST00000508513.5, ENST00000511121.5, ENST00000511967.5, ENST00000513894.5, ENST00000514143.1, ENST00000514839.1, ENST00000515503.5, ENST00000515702.1, ENST00000515718.5, ENST00000610353.4, ENST00000613272.4, ENST00000614836.1, ENST00000615083.4, ENST00000615577.4, ENST00000617441.4, ENST00000619474.4, ENST00000622175.4

Found 595 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCCGCCAACAGGTGGAGGTCTCACCTGTGTGTCTTTGCCCAGGTaGCAGCAAAGCCATTTGAGTGTGCCCTCTCTGGCCTTCCCTTCC +
Preference number: 1 (lower is better)
Translates to: LPPTGGGLTCVSLPR*QQSHLSVPSLAFPS
Trigger: GGAAGGGAAGGCCAGAGAGGGCACACTCAAATGGCTTTGCTGTCACCTGGGCAAAGACACACAGGTGAGACCTCCACCTGTTGGCGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR TCA 90 bp GACTTAGAGGTGAGTACAAGCCACCGCCTGGAGAGCAGAGAAGTCTaGGTGAAGGCAGCTGTGTCAGCCCCAGGGAACCGAGGCAATCCT +
Preference number: 1 (lower is better)
Translates to: DLEVSTSHRLESREV*VKAAVSAPGNRGNP
Trigger: AGGATTGCCTCGGTTCCCTGGGGCTGACACAGCTGCCTTCACTCAGACTTCTCTGCTCTCCAGGCGGTGGCTTGTACTCACCTCTAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR TCA 90 bp GAGCTGAGAACTAGAGACACGGGCTCTCCAATCAAGGGAGGCGGGTaGCTTAGAGGTGAGTACAAGCCACCGCCTGGAGAGCAGAGAAGT +
Preference number: 1 (lower is better)
Translates to: ELRTRDTGSPIKGGG*LRGEYKPPPGEQRS
Trigger: ACTTCTCTGCTCTCCAGGCGGTGGCTTGTACTCACCTCTAAGTCACCCGCCTCCCTTGATTGGAGAGCCCGTGTCTCTAGTTCTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR TCA 90 bp TCTGCCACTGGAAAGGGTTTACACATAGATTCCTGGTCTCAGGTATaGGAGTTCCCAGACGGAGCTGTTAAGCTTGGCTCCCGCCAACAG +
Preference number: 1 (lower is better)
Translates to: SATGKGLHIDSWSQV*EFPDGAVKLGSRQQ
Trigger: CTGTTGGCGGGAGCCAAGCTTAACAGCTCCGTCTGGGAACTCTCATACCTGAGACCAGGAATCTATGTGTAAACCCTTTCCAGTGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR GCA 90 bp AGTCGCCTGGGAACCACCCTACCAGAAGTGAAAGTGACACTCTCTTaGTTCTGTTCCAAGTTCTGTTGCCATTGCTTGGAGCAGTCTGAT +
Preference number: 1 (lower is better)
Translates to: SRLGTTLPEVKVTLS*FCSKFCCHCLEQSD
Trigger: ATCAGACTGCTCCAAGCAATGGCAACAGAACTTGGAACAGAAGCAAGAGAGTGTCACTTTCACTTCTGGTAGGGTGGTTCCCAGGCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR GCA 90 bp CTAGCAGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTaGCACTGGAAAGGGTTTACACATAGATTCCTGGTCTCAGGTATG +
Preference number: 1 (lower is better)
Translates to: LAGRQTLIGSISARF*HWKGFTHRFLVSGM
Trigger: CATACCTGAGACCAGGAATCTATGTGTAAACCCTTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCTGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR CCA 90 bp GGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTaGAAAGGGTTTACACATAGATTCCTGGTCTCAGGTATGAGAGTT +
Preference number: 1 (lower is better)
Translates to: GRQTLIGSISARFCH*KGFTHRFLVSGMRV
Trigger: AACTCTCATACCTGAGACCAGGAATCTATGTGTAAACCCTTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR GCA 90 bp CCAGAAGTGAAAGTGACACTCTCTTGCTTCTGTTCCAAGTTCTGTTaGCATTGCTTGGAGCAGTCTGATTCTCTACCTGAAAGATGGTGT +
Preference number: 1 (lower is better)
Translates to: PEVKVTLSCFCSKFC*HCLEQSDSLPERWC
Trigger: ACACCATCTTTCAGGTAGAGAATCAGACTGCTCCAAGCAATGGCAACAGAACTTGGAACAGAAGCAAGAGAGTGTCACTTTCACTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR TCA 90 bp AGTATGTGCTTATGTAGAACACACAACACACGGATTCTACCCATATaGCCTATTTTTCTTCTTACCCCTACAAGGCTGGTGAGGGTCTGC +
Preference number: 1 (lower is better)
Translates to: SMCLCRTHNTRILPI*PIFLLTPTRLVRVC
Trigger: GCAGACCCTCACCAGCCTTGTAGGGGTAAGAAGAAAAATAGGTCATATGGGTAGAATCCGTGTGTTGTGTGTTCTACATAAGCACATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR GCA 90 bp GTGAAAGTGACACTCTCTTGCTTCTGTTCCAAGTTCTGTTGCCATTaGTTGGAGCAGTCTGATTCTCTACCTGAAAGATGGTGTTTCAAT +
Preference number: 1 (lower is better)
Translates to: VKVTLSCFCSKFCCH*LEQSDSLPERWCFN
Trigger: ATTGAAACACCATCTTTCAGGTAGAGAATCAGACTGCTCCAAGCAATGGCAACAGAACTTGGAACAGAAGCAAGAGAGTGTCACTTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR TCA 90 bp ATTGCTTTTAAACTATTCGATAGAATGAGGTTTGAGTTGTGTGTGTaGGAGCAGGTTGTGTGCGAGTATGTGTGTGTCTATTTATTCAGT +
Preference number: 1 (lower is better)
Translates to: IAFKLFDRMRFELCV*EQVVCEYVCVYLFS
Trigger: ACTGAATAAATAGACACACACATACTCGCACACAACCTGCTCTCACACACACAACTCAAACCTCATTCTATCGAATAGTTTAAAAGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR TCA 90 bp CCTGGGGACACTGAGGAGACCAGGAGGCAGTGCTACCTTCAAGAACAGCAGTCTCCCCCAACCCTGAGCTaGGAACTAGAGACACGGGCT +
Preference number: 2 (lower is better)
Translates to: PGDTEETRRQCYLQEQQSPPTLS*ELETRA
Trigger: AGCCCGTGTCTCTAGTTCTCAGCTCAGGGTTGGGGG...AGACTGCTGTTCTTGAAGGTAGCACTGCCTCCTGGTCTCCTCAGTGTCCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR TCA 90 bp CCTCTTCCTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCCTCAGCCTCCCAAAGTaGGCCACCACGCCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: PLPSLRIMYGGPSHFQIPLSLPK*ATTPCP
Trigger: TGGGCAGGGCGTGGTGGCTCACTTTGGGAGGCTGAG...GGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAGGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CCA 90 bp AAGGCTGGTGAGGGTCTGCTTGCTTTCTATAACCACTGTGTGGCACAGAAGCCCGCTCCCGCCAACAGGTaGAGGTCTCACCTGTGTGTC +
Preference number: 2 (lower is better)
Translates to: KAGEGLLAFYNHCVAQKPAPANR*RSHLCV
Trigger: GACACACAGGTGAGACCTCCACCTGTTGGCGGGAGC...GGGCTTCTGTGCCACACAGTGGTTATAGAAAGCAAGCAGACCCTCACCAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR CAA 90 bp ATTCCTGGTCTCAGGTATGAGAGTTCCCAGACGGAGCTGTTAAGCTaGGCTCCCGCCAACAGGTGGAGGTCTCACCTGTGTGTCTTTGCC +
Preference number: 2 (lower is better)
Translates to: IPGLRYESSQTELLS*APANRWRSHLCVFA
Trigger: GGCAAAGACACACAGGTGAGACCTCCACCTGTTGGCGGGAGCCAAGCTTAACAGCTCCGTCTGGGAACTCTCATACCTGAGACCAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAACACCAAGCTTTCCTaGCTTCCCGGCCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: SSGQASSITVSKRRRCLGNTKLS*LPGPPS
Trigger: AGAGGGAGGGCCGGGAAGCCAGGAAAGCTTGGTGTT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
3UTR-3UTR TCA 90 bp CTTAGAGGTGAGTACAAGCCACCGCCTGGAGAGCAGAGAAGTCTGAGTGAAGGCTTTGAGTTGTGTGTGTaGGAGCAGGTTGTGTGCGAG +
Preference number: 2 (lower is better)
Translates to: LRGEYKPPPGEQRSLSEGFELCV*EQVVCE
Trigger: CTCGCACACAACCTGCTCTCACACACACAACTCAAA...GCCTTCACTCAGACTTCTCTGCTCTCCAGGCGGTGGCTTGTACTCACCTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR TCA 90 bp CTGGGGACACTGAGGAGACCAGGAGGCAGTGCTACCTTCAAGAACAGCAGTCTAGACAGCCCACTGCAGTaGATAGAAATTCCTTCCCAC +
Preference number: 2 (lower is better)
Translates to: LGTLRRPGGSATFKNSSLDSPLQ*IEIPSH
Trigger: GTGGGAAGGAATTTCTATTCACTGCAGTGGGCTGTC...TAGACTGCTGTTCTTGAAGGTAGCACTGCCTCCTGGTCTCCTCAGTGTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTAACACCAAGCTTTCCTaGCTTCCCGGCCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: SGQASSITVSKRRRCLGCNTKLS*LPGPPS
Trigger: AGAGGGAGGGCCGGGAAGCCAGGAAAGCTTGGTGTT...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
3UTR-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAACACCAAGCTTTCCTaGCTTCCCGGCCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: SLINNCIQKETLLGVYPENTKLS*LPGPPS
Trigger: AGAGGGAGGGCCGGGAAGCCAGGAAAGCTTGGTGTT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
3UTR-3UTR CCA 90 bp CTTAGAGGTGAGTACAAGCCACCGCCTGGAGAGCAGAGAAGTCTGAGTGAAGGCAAAGGAGACGCTGCTTaGGGTGTACCCAGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: LRGEYKPPPGEQRSLSEGKGDAA*GVPREN
Trigger: GTTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTT...GCCTTCACTCAGACTTCTCTGCTCTCCAGGCGGTGGCTTGTACTCACCTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CCA 90 bp GCAGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAACTGGTCTTGAACTCCTaGCCTCGTGATCCACCCGTC +
Preference number: 2 (lower is better)
Translates to: AGRQTLIGSISARFCHWKLVLNS*PRDPPV
Trigger: GACGGGTGGATCACGAGGCCAGGAGTTCAAGACCAG...TTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CCA 90 bp CTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCACCCCCAGTACAAGCCACCGCCTaGAGAGCAGAGAAGTCTGAG +
Preference number: 2 (lower is better)
Translates to: LHLGSCMVALPTFRYPPPVQATA*RAEKSE
Trigger: CTCAGACTTCTCTGCTCTCCAGGCGGTGGCTTGTAC...TGGGGGTGGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCCTCCCCATTAGTCTTTaGGGTGCATACATAAGTGTT +
Preference number: 2 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALLPISL*GAYISV
Trigger: AACACTTATGTATGCACCCCAAAGACTAATGGGGAG...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
3UTR-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGCTCCCCATTAGTCTTTaGGGTGCATACATAAGTGTT +
Preference number: 2 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPLPISL*GAYISV
Trigger: AACACTTATGTATGCACCCCAAAGACTAATGGGGAG...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
3UTR-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTAACACCAAGCTTTCCTaGCTTCCCGGCCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: NIQWPSLINNCIQKETLLNTKLS*LPGPPS
Trigger: AGAGGGAGGGCCGGGAAGCCAGGAAAGCTTGGTGTT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
3UTR-3UTR CCA 90 bp CCTCTTCCTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCTCCCAGGCCTTTTACTaGCTGTGGATAGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: PLPSLRIMYGGPSHFQIPSQAFY*LWIGGE
Trigger: CTCTCCTCCTATCCACAGCCAGTAAAAGGCCTGGGA...GGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAGGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CCA 90 bp CTGGGGACACTGAGGAGACCAGGAGGCAGTGCTACCTTCAAGAACAGCAGTCTAAATCCAGCAGCCAAGTaGTTTCAACAGACTTTCTAC +
Preference number: 2 (lower is better)
Translates to: LGTLRRPGGSATFKNSSLNPAAK*FQQTFY
Trigger: GTAGAAAGTCTGTTGAAACCACTTGGCTGCTGGATT...TAGACTGCTGTTCTTGAAGGTAGCACTGCCTCCTGGTCTCCTCAGTGTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CCA 90 bp CTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCACCCCCAGTTAAATACCTCTCATaGCAAAGGCTGGCCCTGAAC +
Preference number: 2 (lower is better)
Translates to: LHLGSCMVALPTFRYPPPVKYLS*QRLALN
Trigger: GTTCAGGGCCAGCCTTTGCCATGAGAGGTATTTAAC...TGGGGGTGGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR TCA 90 bp AAGGCTGGTGAGGGTCTGCTTGCTTTCTATAACCACTGTGTGGCACAGAAGCCCCTCCACTTTAACAGATaGGCAACACCATTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: KAGEGLLAFYNHCVAQKPLHFNR*ATPLLL
Trigger: TAAAAGCAATGGTGTTGCTCATCTGTTAAAGTGGAG...GGGCTTCTGTGCCACACAGTGGTTATAGAAAGCAAGCAGACCCTCACCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR GCA 90 bp CCTCTTCCTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCTTCGAGCAATTCTTTTaGCTCAGCCTCTTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: PLPSLRIMYGGPSHFQIPFEQFF*LSLLSS
Trigger: GCTACTCAAGAGGCTGAGGCAAAAGAATTGCTCGAA...GGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAGGAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGCTCCCCATTAGTCTTTaGGGTGCATACATAAGTGTT +
Preference number: 2 (lower is better)
Translates to: SSGQASSITVSKRRRCLGLPISL*GAYISV
Trigger: AACACTTATGTATGCACCCCAAAGACTAATGGGGAG...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
3UTR-3UTR CCA 90 bp TTCTACCTTAAGTTATGTAGTCCTCTGTTCTCCACTTTAACAGATGAGCAACACGGACCTGCAGTCGCCTaGGAACCACCCTACCAGAAG +
Preference number: 2 (lower is better)
Translates to: FYLKLCSPLFSTLTDEQHGPAVA*EPPYQK
Trigger: CTTCTGGTAGGGTGGTTCCCAGGCGACTGCAGGTCC...GTGTTGCTCATCTGTTAAAGTGGAGAACAGAGGACTACATAACTTAAGGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR GCA 90 bp AGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAAGGAAGTTCTGTTGCCATTaGTTGGAGCAGTCTGATTCT +
Preference number: 2 (lower is better)
Translates to: RKTDTYRLHFCQILPLERKFCCH*LEQSDS
Trigger: AGAATCAGACTGCTCCAAGCAATGGCAACAGAACTT...CCTTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR GCA 90 bp ATTTTGAAGTATAAGAAACCTGTGTCTGCATCTAGGCAGGCAAAAGTAAGTATGTTGCCCAGGCTGGAGTaGAGTGGCGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: ILKYKKPVSASRQAKVSMLPRLE*SGAILA
Trigger: AGCCAAGATCGCGCCACTGCACTCCAGCCTGGGCAA...CATACTTACTTTTGCCTGCCTAGATGCAGACACAGGTTTCTTATACTTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR TCA 90 bp GCAGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAAAAATTAACAGAACTTTaGGACCCCTGTCTTTCACAG +
Preference number: 2 (lower is better)
Translates to: AGRQTLIGSISARFCHWKKLTEL*DPCLSQ
Trigger: CTGTGAAAGACAGGGGTCTCAAAGTTCTGTTAATTT...TTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCTGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR GCA 90 bp CCTCTTCCTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCAAAGTGACACTCTCTTaGTTCTGTTCCAAGTTCTGT +
Preference number: 2 (lower is better)
Translates to: PLPSLRIMYGGPSHFQIPKVTLS*FCSKFC
Trigger: ACAGAACTTGGAACAGAAGCAAGAGAGTGTCACTTT...GGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAGGAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CCA 90 bp ATTTTGAAGTATAAGAAACCTGTGTCTGCATCTAGGCAGGCAAAAGTAAGTATGAACACCAAGCTTTCCTaGCTTCCCGGCCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: ILKYKKPVSASRQAKVSMNTKLS*LPGPPS
Trigger: AGAGGGAGGGCCGGGAAGCCAGGAAAGCTTGGTGTT...CATACTTACTTTTGCCTGCCTAGATGCAGACACAGGTTTCTTATACTTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR TCA 90 bp ATTTTGAAGTATAAGAAACCTGTGTCTGCATCTAGGCAGGCAAAAGTAAGTATGCCCCTACAAGGCTGGTaGGGGTCTGCTTGCTTTCTA +
Preference number: 2 (lower is better)
Translates to: ILKYKKPVSASRQAKVSMPLQGW*GSACFL
Trigger: TAGAAAGCAAGCAGACCCTCACCAGCCTTGTAGGGG...CATACTTACTTTTGCCTGCCTAGATGCAGACACAGGTTTCTTATACTTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR GCA 90 bp CCTCTTCCTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCATTGATCTATCTAGGTaGCAGCCTTTGCAATTTCTT +
Preference number: 2 (lower is better)
Translates to: PLPSLRIMYGGPSHFQIPIDLSR*QPLQFL
Trigger: AAGAAATTGCAAAGGCTGGCACCTAGATAGATCAAT...GGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAGGAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CCA 90 bp CACGCCCTGCCCAACCCAGCCTTTGCAATTTCTACCTTAAGTTATGTAGTCCTCTCTCTACCTGAAAGATaGTGTTTCAATCAATCTTGG +
Preference number: 2 (lower is better)
Translates to: HALPNPAFAISTLSYVVLSLPER*CFNQSW
Trigger: CCAAGATTGATTGAAACACCATCTTTCAGGTAGAGA...GAGGACTACATAACTTAAGGTAGAAATTGCAAAGGCTGGGTTGGGCAGGGCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAACTCCCCATTAGTCTTTaGGGTGCATACATAAGTGTT +
Preference number: 2 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKLPISL*GAYISV
Trigger: AACACTTATGTATGCACCCCAAAGACTAATGGGGAG...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
3UTR-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCAAAGGAGACGCTGCTTaGGGTGTACCCAGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: EVKIITLQTYGRASYKHFKGDAA*GVPREN
Trigger: GTTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTT...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
3UTR-3UTR CCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAACTCCCCATTAGTCTTTaGGGTGCATACATAAGTGTT +
Preference number: 2 (lower is better)
Translates to: SVVSENIQWPSLINNCIQLPISL*GAYISV
Trigger: AACACTTATGTATGCACCCCAAAGACTAATGGGGAG...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
3UTR-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCAAGGGATTTTCTAACTaGCCTGGGCAAGGAGTTCAC +
Preference number: 2 (lower is better)
Translates to: EVKIITLQTYGRASYKHFKGFSN*PGQGVH
Trigger: GTGAACTCCTTGCCCAGGCCAGTTAGAAAATCCCTT...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
3UTR-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCAGTGAAAACATCCAGTaGCCAAGCCTCATCAATAAC +
Preference number: 2 (lower is better)
Translates to: EVKIITLQTYGRASYKHFSENIQ*PSLINN
Trigger: GTTATTGATGAGGCTTGGCCACTGGATGTTTTCACT...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
3UTR TCA 72 bp GTGAGTACAAGCCACCGCCTGGAGAGCAGAGAAGTCTaGGTGAAGGCAGCTGTGTCAGCCCCAGGGAACCGA +
Preference number: 3 (lower is better)
Translates to: VSTSHRLESREV*VKAAVSAPGNR
Trigger: TCGGTTCCCTGGGGCTGACACAGCTGCCTTCACTCAGACTTCTCTGCTCTCCAGGCGGTGGCTTGTACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR TCA 72 bp ACTAGAGACACGGGCTCTCCAATCAAGGGAGGCGGGTaGCTTAGAGGTGAGTACAAGCCACCGCCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: TRDTGSPIKGGG*LRGEYKPPPGE
Trigger: CTCTCCAGGCGGTGGCTTGTACTCACCTCTAAGTCACCCGCCTCCCTTGATTGGAGAGCCCGTGTCTCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR TCA 72 bp ACAGGTGGAGGTCTCACCTGTGTGTCTTTGCCCAGGTaGCAGCAAAGCCATTTGAGTGTGCCCTCTCTGGCC +
Preference number: 3 (lower is better)
Translates to: TGGGLTCVSLPR*QQSHLSVPSLA
Trigger: GGCCAGAGAGGGCACACTCAAATGGCTTTGCTGTCACCTGGGCAAAGACACACAGGTGAGACCTCCACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR TCA 72 bp CTCATGGCAAAGGCTGGCCCTGAACACCCGCATCCGTaGTTTAAGACTCTGTGGGTTGAGGGAGAAGAAGAG +
Preference number: 3 (lower is better)
Translates to: LMAKAGPEHPHP*FKTLWVEGEEE
Trigger: CTCTTCTTCTCCCTCAACCCACAGAGTCTTAAATCACGGATGCGGGTGTTCAGGGCCAGCCTTTGCCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CAA 90 bp CTGGGGACACTGAGGAGACCAGGAGGCAGTGCTACCTTCAAGAACAGCAGTCTACTGTTCCAAGTTCTGTaGCCATTGCTTGGAGCAGTC +
Preference number: 3 (lower is better)
Translates to: LGTLRRPGGSATFKNSSLLFQVL*PLLGAV
Trigger: GACTGCTCCAAGCAATGGCAACAGAACTTGGAACAG...TAGACTGCTGTTCTTGAAGGTAGCACTGCCTCCTGGTCTCCTCAGTGTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CAA 90 bp CCTCTTCCTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCAAAAGGAGACGCTGCTaGGGGTGTACCCAGAGAAAA +
Preference number: 3 (lower is better)
Translates to: PLPSLRIMYGGPSHFQIPKRRRC*GCTQRK
Trigger: TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTT...GGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAGGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR TCA 72 bp GGAAAGGGTTTACACATAGATTCCTGGTCTCAGGTATaGGAGTTCCCAGACGGAGCTGTTAAGCTTGGCTCC +
Preference number: 3 (lower is better)
Translates to: GKGLHIDSWSQV*EFPDGAVKLGS
Trigger: GGAGCCAAGCTTAACAGCTCCGTCTGGGAACTCTCATACCTGAGACCAGGAATCTATGTGTAAACCCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CAA 90 bp CCTGGGGACACTGAGGAGACCAGGAGGCAGTGCTACCTTCAAGAACAGCAGTCTGTGTTTCAATCAATCTaGGTGAATGAGAGGAGAATA +
Preference number: 3 (lower is better)
Translates to: PGDTEETRRQCYLQEQQSVFQSI*VNERRI
Trigger: TATTCTCCTCTCATTCACCAAGATTGATTGAAACAC...AGACTGCTGTTCTTGAAGGTAGCACTGCCTCCTGGTCTCCTCAGTGTCCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR GCA 72 bp GGAACCACCCTACCAGAAGTGAAAGTGACACTCTCTTaGTTCTGTTCCAAGTTCTGTTGCCATTGCTTGGAG +
Preference number: 3 (lower is better)
Translates to: GTTLPEVKVTLS*FCSKFCCHCLE
Trigger: CTCCAAGCAATGGCAACAGAACTTGGAACAGAAGCAAGAGAGTGTCACTTTCACTTCTGGTAGGGTGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR GCA 72 bp ATTTTTCTTCTTACCCCTACAAGGCTGGTGAGGGTCTaGTTGCTTTCTATAACCACTGTGTGGCACAGAAGC +
Preference number: 3 (lower is better)
Translates to: IFLLTPTRLVRV*LLSITTVWHRS
Trigger: GCTTCTGTGCCACACAGTGGTTATAGAAAGCAAGCAGACCCTCACCAGCCTTGTAGGGGTAAGAAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR CCA 72 bp ACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTaGAAAGGGTTTACACATAGATTCCTGGTCTCAGGT +
Preference number: 3 (lower is better)
Translates to: TLIGSISARFCH*KGFTHRFLVSG
Trigger: ACCTGAGACCAGGAATCTATGTGTAAACCCTTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR GCA 72 bp ACACTCTCTTGCTTCTGTTCCAAGTTCTGTTGCCATTaGTTGGAGCAGTCTGATTCTCTACCTGAAAGATGG +
Preference number: 3 (lower is better)
Translates to: TLSCFCSKFCCH*LEQSDSLPERW
Trigger: CCATCTTTCAGGTAGAGAATCAGACTGCTCCAAGCAATGGCAACAGAACTTGGAACAGAAGCAAGAGAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR GCA 72 bp CCTGTGTCTGCATCTAGGCAGGCAAAAGTAAGTATGTaGTTATGTAGAACACACAACACACGGATTCTACCC +
Preference number: 3 (lower is better)
Translates to: PVSASRQAKVSM*LCRTHNTRILP
Trigger: GGGTAGAATCCGTGTGTTGTGTGTTCTACATAAGCACATACTTACTTTTGCCTGCCTAGATGCAGACACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
3UTR-3UTR CAA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCAAAAGGAGACGCTGCTaGGGGTGTACCCAGAGAAAA +
Preference number: 3 (lower is better)
Translates to: EVKIITLQTYGRASYKHFKRRRC*GCTQRK
Trigger: TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTT...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
3UTR TCA 72 bp AAACTATTCGATAGAATGAGGTTTGAGTTGTGTGTGTaGGAGCAGGTTGTGTGCGAGTATGTGTGTGTCTAT +
Preference number: 3 (lower is better)
Translates to: KLFDRMRFELCV*EQVVCEYVCVY
Trigger: ATAGACACACACATACTCGCACACAACCTGCTCTCACACACACAACTCAAACCTCATTCTATCGAATAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCACGCAGGAGGCCCTGTaGGGCCCCATCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALTQEAL*GPISRW
Trigger: CCAGCGGGAGATGGGGCCCCACAGGGCCTCCTGCGT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCGTCTCCTGGCCTGGTTaGCGGCAGTTCGGACGGCGC +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALVSWPG*RQFGRR
Trigger: GCGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGAC...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CCTGGGGACACTGAGGAGACCAGGAGGCAGTGCTACCTTCAAGAACAGCAGTCTACGCAGGAGGCCCTGTaGGGCCCCATCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PGDTEETRRQCYLQEQQSTQEAL*GPISRW
Trigger: CCAGCGGGAGATGGGGCCCCACAGGGCCTCCTGCGT...AGACTGCTGTTCTTGAAGGTAGCACTGCCTCCTGGTCTCCTCAGTGTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGACGCAGGAGGCCCTGTaGGGCCCCATCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPTQEAL*GPISRW
Trigger: CCAGCGGGAGATGGGGCCCCACAGGGCCTCCTGCGT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCGGGGCCGGATGCTTCTaGAGGCGTCATTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALGAGCF*RRHCRL
Trigger: CAGCCGGCAATGACGCCTTCAGAAGCATCCGGCCCC...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGTCTCCTGGCCTGGTTaGCGGCAGTTCGGACGGCGC +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPVSWPG*RQFGRR
Trigger: GCGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGAC...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCGGAAGGTCTCGGAGGTaGAGCGCACCAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALGRSRR*SAPTER
Trigger: CCTCTCTGTTGGTGCGCTTCACCTCCGAGACCTTCC...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCCCCCCAACCCTGAGCTaGGAACTAGAGACACGGGCT +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALPPTLS*ELETRA
Trigger: AGCCCGTGTCTCTAGTTCTCAGCTCAGGGTTGGGGG...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCCATCAGCACCACGTCTaGCTGCTGGTAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALHQHHV*LLVGQG
Trigger: CCCCTGTCCTACCAGCAGGCAGACGTGGTGCTGATG...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCGAAAAGAGCCCTCAGTaGGCAGCTGCAGCACACGCC +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALEKSPQ*AAAAHA
Trigger: GGCGTGTGCTGCAGCTGCCCACTGAGGGCTCTTTTC...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGAACTTTGAGACCCCTGTCTTTCACAGGACCTGCAGTCGCCTGGGAACCACCCTCCCGCTGGTCAGTCTaGGTGGCCACCACCAGCACA +
Preference number: 4 (lower is better)
Translates to: RTLRPLSFTGPAVAWEPPSRWSV*VATTST
Trigger: TGTGCTGGTGGTGGCCACCCAGACTGACCAGCGGGA...GGGTGGTTCCCAGGCGACTGCAGGTCCTGTGAAAGACAGGGGTCTCAAAGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGTCCCGCTGGTCAGTCTaGGTGGCCACCACCAGCACA +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPSRWSV*VATTST
Trigger: TGTGCTGGTGGTGGCCACCCAGACTGACCAGCGGGA...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGGAAGGTCTCGGAGGTaGAGCGCACCAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPGRSRR*SAPTER
Trigger: CCTCTCTGTTGGTGCGCTTCACCTCCGAGACCTTCC...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCCCGATTGCTAAGGGCTaGGCACTCCAGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALPIAKG*ALQVAL
Trigger: AAGGGCTACCTGGAGTGCTCAGCCCTTAGCAATCGG...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGGTCTCCTGGCCTGGTTaGCGGCAGTTCGGACGGCGC +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGVSWPG*RQFGRR
Trigger: GCGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGAC...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGCATCAGCACCACGTCTaGCTGCTGGTAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPHQHHV*LLVGQG
Trigger: CCCCTGTCCTACCAGCAGGCAGACGTGGTGCTGATG...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGACGCAGGAGGCCCTGTaGGGCCCCATCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPETQEAL*GPISRW
Trigger: CCAGCGGGAGATGGGGCCCCACAGGGCCTCCTGCGT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCTTTCGTCTCCTGGCCTaGTTGACGGCAGTTCGGACG +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALFRLLA*LTAVRT
Trigger: CGTCCGAACTGCCGTCAACCAGGCCAGGAGACGAAA...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCAACACCAAGCTTTCCTaGCTTCCCGGCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALNTKLS*LPGPPS
Trigger: AGAGGGAGGGCCGGGAAGCCAGGAAAGCTTGGTGTT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AATCCTCCCACCAGAGATCAAGACCCCGGTCCCAGGCCTTTTACTGGCTGTGGAGGACCTGCAGTCGCCTaGGAACCACCCTACCAGAAG +
Preference number: 4 (lower is better)
Translates to: NPPTRDQDPGPRPFTGCGGPAVA*EPPYQK
Trigger: CTTCTGGTAGGGTGGTTCCCAGGCGACTGCAGGTCC...TCCACAGCCAGTAAAAGGCCTGGGACCGGGGTCTTGATCTCTGGTGGGAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCCCTGCTGTCCTACTCTaGAGTCCAGAATCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALPAVLL*SPESQG
Trigger: TCCCTGGGATTCTGGACTTCAGAGTAGGACAGCAGG...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCTCTGGATGCCATCCATaGAGACGTCCACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALSGCHP*RRPPLC
Trigger: ACACAGGGGTGGACGTCTTCATGGATGGCATCCAGA...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGGGGGCCGGATGCTTCTaGAGGCGTCATTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGGAGCF*RRHCRL
Trigger: CAGCCGGCAATGACGCCTTCAGAAGCATCCGGCCCC...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTGTCTCCTGGCCTGGTTaGCGGCAGTTCGGACGGCGC +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCVSWPG*RQFGRR
Trigger: GCGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGAC...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AGAACTTTGAGACCCCTGTCTTTCACAGGACCTGCAGTCGCCTGGGAACCACCCGCGATCTTGGCTTACTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RTLRPLSFTGPAVAWEPPAILAY*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTAAGCCAAGATCGC...GGGTGGTTCCCAGGCGACTGCAGGTCCTGTGAAAGACAGGGGTCTCAAAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCTGTTCTCGTACACTGTaGGCTTGTAGGCCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALCSRTL*ACRPPG
Trigger: TCCCGGAGGCCTACAAGCCCACAGTGTACGAGAACA...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCTGTCCTCAGGACCTCTaGCGGCGATTTGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALCPQDL*RRFAEC
Trigger: ACATTCTGCAAATCGCCGTCAGAGGTCCTGAGGACA...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGCCTGCTGTCCTACTCTaGAGTCCAGAATCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPPAVLL*SPESQG
Trigger: TCCCTGGGATTCTGGACTTCAGAGTAGGACAGCAGG...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGTCTGGATGCCATCCATaGAGACGTCCACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPSGCHP*RRPPLC
Trigger: ACACAGGGGTGGACGTCTTCATGGATGGCATCCAGA...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GCAGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAAGGGGCCGGATGCTTCTaGAGGCGTCATTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: AGRQTLIGSISARFCHWKGAGCF*RRHCRL
Trigger: CAGCCGGCAATGACGCCTTCAGAAGCATCCGGCCCC...TTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGGGGGCCGGATGCTTCTaGAGGCGTCATTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEGAGCF*RRHCRL
Trigger: CAGCCGGCAATGACGCCTTCAGAAGCATCCGGCCCC...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTGGGGCCGGATGCTTCTaGAGGCGTCATTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCGAGCF*RRHCRL
Trigger: CAGCCGGCAATGACGCCTTCAGAAGCATCCGGCCCC...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTCCCTTCCATGGCATTaGCGCAGGAGGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGSLPWH*RRRPCG
Trigger: CCCACAGGGCCTCCTGCGTCAATGCCATGGAAGGGA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCTCCAAAAGGAGACGCTaGTTGGGGTGTACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALSKRRR*LGCTQR
Trigger: TCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGA...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CCTGGGGACACTGAGGAGACCAGGAGGCAGTGCTACCTTCAAGAACAGCAGTCTCCACCCCAAGATGGTTaGGTTAGTGTGTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PGDTEETRRQCYLQEQQSPPQDG*VSVCGA
Trigger: TGCCCCACACACACTAACCCAACCATCTTGGGGTGG...AGACTGCTGTTCTTGAAGGTAGCACTGCCTCCTGGTCTCCTCAGTGTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGCCACCCCAAGATGGTTaGGTTAGTGTGTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPPPQDG*VSVCGA
Trigger: TGCCCCACACACACTAACCCAACCATCTTGGGGTGG...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGTGTTCTCGTACACTGTaGGCTTGTAGGCCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPCSRTL*ACRPPG
Trigger: TCCCGGAGGCCTACAAGCCCACAGTGTACGAGAACA...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGAGGCCCAGGCTGATCTaGATGCCATCCATGAAGACG +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPRPRLI*MPSMKT
Trigger: CGTCTTCATGGATGGCATCCAGATCAGCCTGGGCCT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTACGCAGGAGGCCCTGTaGGGCCCCATCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLTQEAL*GPISRW
Trigger: CCAGCGGGAGATGGGGCCCCACAGGGCCTCCTGCGT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AAGGCTGGTGAGGGTCTGCTTGCTTTCTATAACCACTGTGTGGCACAGAAGCCCGCAGTGGCGCGATCTTaGCTTACTGCAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: KAGEGLLAFYNHCVAQKPAVARS*LTATSA
Trigger: GGCGGAGGTTGCAGTAAGCCAAGATCGCGCCACTGC...GGGCTTCTGTGCCACACAGTGGTTATAGAAAGCAAGCAGACCCTCACCAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGCCACCAACACGCACTTaGTGGAACTCAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPPPTRT*WNSASS
Trigger: GGAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGG...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGGGAAGGTCTCGGAGGTaGAGCGCACCAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGGRSRR*SAPTER
Trigger: CCTCTCTGTTGGTGCGCTTCACCTCCGAGACCTTCC...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGGCCGGATGCTTCTaGAGGCGTCATTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLGAGCF*RRHCRL
Trigger: CAGCCGGCAATGACGCCTTCAGAAGCATCCGGCCCC...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTTCCCTTCCATGGCATTaGCGCAGGAGGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCSLPWH*RRRPCG
Trigger: CCCACAGGGCCTCCTGCGTCAATGCCATGGAAGGGA...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTCTCCTGGCCTGGTTaGCGGCAGTTCGGACGGCGC +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLVSWPG*RQFGRR
Trigger: GCGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGAC...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AATCCTCCCACCAGAGATCAAGACCCCGGTCCCAGGCCTTTTACTGGCTGTGGAGAGAGCAGAGAAGTCTaGGTGAAGGCAGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: NPPTRDQDPGPRPFTGCGESREV*VKAAVS
Trigger: TGACACAGCTGCCTTCACTCAGACTTCTCTGCTCTC...TCCACAGCCAGTAAAAGGCCTGGGACCGGGGTCTTGATCTCTGGTGGGAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp CTTAGAGGTGAGTACAAGCCACCGCCTGGAGAGCAGAGAAGTCTGAGTGAAGGCTCCTGGTCTCAGGTATaGGAGTTCCCAGACGGAGCT +
Preference number: 4 (lower is better)
Translates to: LRGEYKPPPGEQRSLSEGSWSQV*EFPDGA
Trigger: AGCTCCGTCTGGGAACTCTCATACCTGAGACCAGGA...GCCTTCACTCAGACTTCTCTGCTCTCCAGGCGGTGGCTTGTACTCACCTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCACATCTGTTGCTTCCTaGTCTGGATGCTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALTSVAS*SGCWFH
Trigger: GTGGAACCAGCATCCAGATCAGGAAGCAACAGATGT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS-3UTR GCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGAGCATCTTCCCAGCCTaGTGTCCTACTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPSIFPA*CPTLKS
Trigger: GGACTTCAGAGTAGGACAGCAGGCTGGGAAGATGCT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGCATCAGCACCACGTCTaGCTGCTGGTAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGHQHHV*LLVGQG
Trigger: CCCCTGTCCTACCAGCAGGCAGACGTGGTGCTGATG...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCGCACTCAAACACCTaGTGTACTCCCCGATTGCTA +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPAHSNT*CTPRLL
Trigger: TAGCAATCGGGGAGTACAGCAGGTGTTTGAGTGCGC...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp CTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCACCCCCATCCCTTCCCCTCCCCTaGCCGGTCATCTTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: LHLGSCMVALPTFRYPPPSLPLP*PVIFQA
Trigger: GGCTTGAAAGATGACCGGGCAGGGGAGGGGAAGGGA...TGGGGGTGGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGTTCTACTCCAAGAAGTaGCAAAGGCCCCGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPFYSKK*QRPRER
Trigger: ACGCTCTCGGGGCCTTTGCCACTTCTTGGAGTAGAA...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGGAAAAGAGCCCTCAGTaGGCAGCTGCAGCACACGCC +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGEKSPQ*AAAAHA
Trigger: GGCGTGTGCTGCAGCTGCCCACTGAGGGCTCTTTTC...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AAGGCTGGTGAGGGTCTGCTTGCTTTCTATAACCACTGTGTGGCACAGAAGCCCAACACCAAGCTTTCCTaGCTTCCCGGCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KAGEGLLAFYNHCVAQKPNTKLS*LPGPPS
Trigger: AGAGGGAGGGCCGGGAAGCCAGGAAAGCTTGGTGTT...GGGCTTCTGTGCCACACAGTGGTTATAGAAAGCAAGCAGACCCTCACCAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCAAAGGAGACGCTGCTTaGGGTGTACCCAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALKGDAA*GVPREN
Trigger: GTTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGAACTTTGAGACCCCTGTCTTTCACAGGACCTGCAGTCGCCTGGGAACCACCCTCCCAGGCCTTTTACTaGCTGTGGATAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RTLRPLSFTGPAVAWEPPSQAFY*LWIGGE
Trigger: CTCTCCTCCTATCCACAGCCAGTAAAAGGCCTGGGA...GGGTGGTTCCCAGGCGACTGCAGGTCCTGTGAAAGACAGGGGTCTCAAAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGAGAGAAAGAAAAGCCTaGGGGACAGCCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPRERKA*GTAHCS
Trigger: ACTGCAGTGGGCTGTCCCCCAGGCTTTTCTTTCTCT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGAGCTCTCGGAAGCTTaGAGAAACCACCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPELSEA*RNHQLI
Trigger: GATGAGCTGGTGGTTTCTCCAAGCTTCCGAGAGCTC...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622175.4
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCAAGCACCGTCTGCTTTaGAAACCTCCAAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALKHRLL*KPPKPS
Trigger: ACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGGGAAGGTCTCGGAGGTaGAGCGCACCAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEGRSRR*SAPTER
Trigger: CCTCTCTGTTGGTGCGCTTCACCTCCGAGACCTTCC...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGCCGGATGCTTCTaGAGGCGTCATTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLGAGCF*RRHCRL
Trigger: CAGCCGGCAATGACGCCTTCAGAAGCATCCGGCCCC...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTCCCTTCCATGGCATTaGCGCAGGAGGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLSLPWH*RRRPCG
Trigger: CCCACAGGGCCTCCTGCGTCAATGCCATGGAAGGGA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGCCGATTGCTAAGGGCTaGGCACTCCAGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGPIAKG*ALQVAL
Trigger: AAGGGCTACCTGGAGTGCTCAGCCCTTAGCAATCGG...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAGTCTCCTGGCCTGGTTaGCGGCAGTTCGGACGGCGC +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKVSWPG*RQFGRR
Trigger: GCGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGAC...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTCTCAGCCTCCCAAAGTaGGCCACCACGCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLLSLPK*ATTPCP
Trigger: TGGGCAGGGCGTGGTGGCTCACTTTGGGAGGCTGAG...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGGGCAAAGGCTGGCCCTaGACACCCGCATCCGTGATT +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEGKGWP*TPASVI
Trigger: AATCACGGATGCGGGTGTTCAGGGCCAGCCTTTGCC...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp AGAACTTTGAGACCCCTGTCTTTCACAGGACCTGCAGTCGCCTGGGAACCACCCGTGTCTTTGCCCAGGTaGCAGCAAAGCCATTTGAGT +
Preference number: 4 (lower is better)
Translates to: RTLRPLSFTGPAVAWEPPVSLPR*QQSHLS
Trigger: ACTCAAATGGCTTTGCTGTCACCTGGGCAAAGACAC...GGGTGGTTCCCAGGCGACTGCAGGTCCTGTGAAAGACAGGGGTCTCAAAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGAATGTTACTTCTCCCTaGCCATCCAAGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPNVTSP*PSKHRL
Trigger: CAGACGGTGCTTGGATGGGCAGGGAGAAGTAACATT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp CTTAGAGGTGAGTACAAGCCACCGCCTGGAGAGCAGAGAAGTCTGAGTGAAGGCAGCATCTTCCCAGCCTaGTGTCCTACTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LRGEYKPPPGEQRSLSEGSIFPA*CPTLKS
Trigger: GGACTTCAGAGTAGGACAGCAGGCTGGGAAGATGCT...GCCTTCACTCAGACTTCTCTGCTCTCCAGGCGGTGGCTTGTACTCACCTCTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGCATCAGCACCACGTCTaGCTGCTGGTAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEHQHHV*LLVGQG
Trigger: CCCCTGTCCTACCAGCAGGCAGACGTGGTGCTGATG...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCAACCACCAGCTCATCTaGAGACTCTCAGTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALNHQLI*RLSVAE
Trigger: TTCTGCTACTGAGAGTCTGCAGATGAGCTGGTGGTT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622175.4
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGGAAAAGAGCCCTCAGTaGGCAGCTGCAGCACACGCC +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEEKSPQ*AAAAHA
Trigger: GGCGTGTGCTGCAGCTGCCCACTGAGGGCTCTTTTC...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTCCCGCTGGTCAGTCTaGGTGGCCACCACCAGCACA +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLSRWSV*VATTST
Trigger: TGTGCTGGTGGTGGCCACCCAGACTGACCAGCGGGA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGAAAGGAGACGCTGCTTaGGGTGTACCCAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPKGDAA*GVPREN
Trigger: GTTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCAAGGGATTTTCTAACTaGCCTGGGCAAGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALKGFSN*PGQGVH
Trigger: GTGAACTCCTTGCCCAGGCCAGTTAGAAAATCCCTT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CACGCCCTGCCCAACCCAGCCTTTGCAATTTCTACCTTAAGTTATGTAGTCCTCGCTCCCGCCAACAGGTaGAGGTCTCACCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: HALPNPAFAISTLSYVVLAPANR*RSHLCV
Trigger: GACACACAGGTGAGACCTCCACCTGTTGGCGGGAGC...GAGGACTACATAACTTAAGGTAGAAATTGCAAAGGCTGGGTTGGGCAGGGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAGCCATGTTGGAAACTaGCTGCGAGACCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGSHVGN*LRDPCP
Trigger: GGGACAGGGGTCTCGCAGCCAGTTTCCAACATGGCT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617441.4
CDS-3UTR TCA 90 bp CCTGGGGACACTGAGGAGACCAGGAGGCAGTGCTACCTTCAAGAACAGCAGTCTAAGCACCGTCTGCTTTaGAAACCTCCAAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: PGDTEETRRQCYLQEQQSKHRLL*KPPKPS
Trigger: ACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTT...AGACTGCTGTTCTTGAAGGTAGCACTGCCTCCTGGTCTCCTCAGTGTCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGAAGCACCGTCTGCTTTaGAAACCTCCAAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPKHRLL*KPPKPS
Trigger: ACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGCCTGCTGTCCTACTCTaGAGTCCAGAATCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGPAVLL*SPESQG
Trigger: TCCCTGGGATTCTGGACTTCAGAGTAGGACAGCAGG...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGAAGGTCTCGGAGGTaGAGCGCACCAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLGRSRR*SAPTER
Trigger: CCTCTCTGTTGGTGCGCTTCACCTCCGAGACCTTCC...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTCTGGATGCCATCCATaGAGACGTCCACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGSGCHP*RRPPLC
Trigger: ACACAGGGGTGGACGTCTTCATGGATGGCATCCAGA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCCTTCAAGTTCAGGAATaGGTTATGGTTGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALLQVQE*VMVGHR
Trigger: TCTGTGGCCAACCATAACTCATTCCTGAACTTGAAG...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTGGTAGCCCTTGGCTCTaGCATCCTGGGCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCGSPWL*HPGPVS
Trigger: AGAAACTGGCCCAGGATGTCAGAGCCAAGGGCTACC...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGGGTAGCCCTTGGCTCTaGCATCCTGGGCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEGSPWL*HPGPVS
Trigger: AGAAACTGGCCCAGGATGTCAGAGCCAAGGGCTACC...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTCCGATTGCTAAGGGCTaGGCACTCCAGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCPIAKG*ALQVAL
Trigger: AAGGGCTACCTGGAGTGCTCAGCCCTTAGCAATCGG...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGCCGATTGCTAAGGGCTaGGCACTCCAGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEPIAKG*ALQVAL
Trigger: AAGGGCTACCTGGAGTGCTCAGCCCTTAGCAATCGG...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGAGATCTTGCACTCATTaGTGGAGAAGAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPRSCTH*WRRASF
Trigger: GAAGGAGGCTCTTCTCCATCAATGAGTGCAAGATCT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGCCTCTGACGGCGATTTaGAGAATGTTACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPPLTAI*RMLLLP
Trigger: AGGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGG...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAAGGGTCTTTCACAGGACCTaGAGTCGCCTGGGAACCACC +
Preference number: 4 (lower is better)
Translates to: RKTDTYRLHFCQILPLERVFHRT*SRLGTT
Trigger: GGTGGTTCCCAGGCGACTGCAGGTCCTGTGAAAGAC...CCTTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp AATCCTCCCACCAGAGATCAAGACCCCGGTCCCAGGCCTTTTACTGGCTGTGGATATCGGCTCCATTTCTaGCAGATTCTGCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: NPPTRDQDPGPRPFTGCGYRLHF*QILPLE
Trigger: TTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATA...TCCACAGCCAGTAAAAGGCCTGGGACCGGGGTCTTGATCTCTGGTGGGAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGATACAACAGTTGGGCTaGCAGGGAGTCCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGIQQLG*QGVHPK
Trigger: CTTGGGGTGGACTCCCTGCCAGCCCAACTGTTGTAT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCACCCCCATGTTCTCGTACACTGTaGGCTTGTAGGCCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LHLGSCMVALPTFRYPPPCSRTL*ACRPPG
Trigger: TCCCGGAGGCCTACAAGCCCACAGTGTACGAGAACA...TGGGGGTGGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTTCTCGTACACTGTaGGCTTGTAGGCCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGCSRTL*ACRPPG
Trigger: TCCCGGAGGCCTACAAGCCCACAGTGTACGAGAACA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAACGCAGGAGGCCCTGTaGGGCCCCATCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQTQEAL*GPISRW
Trigger: CCAGCGGGAGATGGGGCCCCACAGGGCCTCCTGCGT...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CACGCCCTGCCCAACCCAGCCTTTGCAATTTCTACCTTAAGTTATGTAGTCCTCTTTCGTCTCCTGGCCTaGTTGACGGCAGTTCGGACG +
Preference number: 4 (lower is better)
Translates to: HALPNPAFAISTLSYVVLFRLLA*LTAVRT
Trigger: CGTCCGAACTGCCGTCAACCAGGCCAGGAGACGAAA...GAGGACTACATAACTTAAGGTAGAAATTGCAAAGGCTGGGTTGGGCAGGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp CCTCTTCCTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCCTGGTCTTGAACTCCTaGCCTCGTGATCCACCCGTC +
Preference number: 4 (lower is better)
Translates to: PLPSLRIMYGGPSHFQIPLVLNS*PRDPPV
Trigger: GACGGGTGGATCACGAGGCCAGGAGTTCAAGACCAG...GGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAGGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGGCTCTGCTGCCACCGTaGAACCACCTCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEALLPP*NHLLFL
Trigger: AAGGAAGAGGAGGTGGTTCCACGGTGGCAGCAGAGC...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCTCTTCAACTGGTGTGTaGAGGAGAAGTTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALSSTGV*RRSFQT
Trigger: TGTTTGGAAACTTCTCCTTCACACACCAGTTGAAGA...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTCCTCAGGACCTCTaGCGGCGATTTGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGCPQDL*RRFAEC
Trigger: ACATTCTGCAAATCGCCGTCAGAGGTCCTGAGGACA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGCCTGCTGTCCTACTCTaGAGTCCAGAATCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEPAVLL*SPESQG
Trigger: TCCCTGGGATTCTGGACTTCAGAGTAGGACAGCAGG...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGCCACCAACACGCACTTaGTGGAACTCAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGPPTRT*WNSASS
Trigger: GGAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGG...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGAAGGTCTCGGAGGTaGAGCGCACCAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLGRSRR*SAPTER
Trigger: CCTCTCTGTTGGTGCGCTTCACCTCCGAGACCTTCC...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp CACGCCCTGCCCAACCCAGCCTTTGCAATTTCTACCTTAAGTTATGTAGTCCTCTCTGGATGCCATCCATaGAGACGTCCACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: HALPNPAFAISTLSYVVLSGCHP*RRPPLC
Trigger: ACACAGGGGTGGACGTCTTCATGGATGGCATCCAGA...GAGGACTACATAACTTAAGGTAGAAATTGCAAAGGCTGGGTTGGGCAGGGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGTCTGGATGCCATCCATaGAGACGTCCACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPESGCHP*RRPPLC
Trigger: ACACAGGGGTGGACGTCTTCATGGATGGCATCCAGA...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGCTTCAAGTTCAGGAATaGGTTATGGTTGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPLQVQE*VMVGHR
Trigger: TCTGTGGCCAACCATAACTCATTCCTGAACTTGAAG...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAATCCCTTCCATGGCATTaGCGCAGGAGGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKSLPWH*RRRPCG
Trigger: CCCACAGGGCCTCCTGCGTCAATGCCATGGAAGGGA...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGTAGCCCTTGGCTCTaGCATCCTGGGCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLGSPWL*HPGPVS
Trigger: AGAAACTGGCCCAGGATGTCAGAGCCAAGGGCTACC...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGCCGATTGCTAAGGGCTaGGCACTCCAGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLPIAKG*ALQVAL
Trigger: AAGGGCTACCTGGAGTGCTCAGCCCTTAGCAATCGG...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGGACAGCAAAGCCATTTaGGTGTGCCCTCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEDSKAI*VCPLWP
Trigger: AGGCCAGAGAGGGCACACTCAAATGGCTTTGCTGTC...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAGCATCTTCCCAGCCTaGTGTCCTACTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGSIFPA*CPTLKS
Trigger: GGACTTCAGAGTAGGACAGCAGGCTGGGAAGATGCT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTCATCAGCACCACGTCTaGCTGCTGGTAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLHQHHV*LLVGQG
Trigger: CCCCTGTCCTACCAGCAGGCAGACGTGGTGCTGATG...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGGCGCACTCAAACACCTaGTGTACTCCCCGATTGCTA +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGAHSNT*CTPRLL
Trigger: TAGCAATCGGGGAGTACAGCAGGTGTTTGAGTGCGC...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCATCCCTGTTGCAGAATaGCGAAGAAATGTCTTGACA +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALIPVAE*RRNVLT
Trigger: TGTCAAGACATTTCTTCGGCATTCTGCAACAGGGAT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619474.4
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGCCACCCCAAGATGGTTaGGTTAGTGTGTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEPPQDG*VSVCGA
Trigger: TGCCCCACACACACTAACCCAACCATCTTGGGGTGG...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGATACAACAGTTGGGCTaGCAGGGAGTCCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEIQQLG*QGVHPK
Trigger: CTTGGGGTGGACTCCCTGCCAGCCCAACTGTTGTAT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTTCTACTCCAAGAAGTaGCAAAGGCCCCGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGFYSKK*QRPRER
Trigger: ACGCTCTCGGGGCCTTTGCCACTTCTTGGAGTAGAA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGAAAAGAGCCCTCAGTaGGCAGCTGCAGCACACGCC +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLEKSPQ*AAAAHA
Trigger: GGCGTGTGCTGCAGCTGCCCACTGAGGGCTCTTTTC...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGTGTTCTCGTACACTGTaGGCTTGTAGGCCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPECSRTL*ACRPPG
Trigger: TCCCGGAGGCCTACAAGCCCACAGTGTACGAGAACA...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTAGGCCCAGGCTGATCTaGATGCCATCCATGAAGACG +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCRPRLI*MPSMKT
Trigger: CGTCTTCATGGATGGCATCCAGATCAGCCTGGGCCT...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGGAATGAGTTATGGTTaGCCACAGAGTAGCACATCA +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPGMSYG*PQSSTS
Trigger: TGATGTGCTACTCTGTGGCCAACCATAACTCATTCC...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAATCCCGCTGGTCAGTCTaGGTGGCCACCACCAGCACA +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKSRWSV*VATTST
Trigger: TGTGCTGGTGGTGGCCACCCAGACTGACCAGCGGGA...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTTTCGTCTCCTGGCCTaGTTGACGGCAGTTCGGACG +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLFRLLA*LTAVRT
Trigger: CGTCCGAACTGCCGTCAACCAGGCCAGGAGACGAAA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGAACACCAAGCTTTCCTaGCTTCCCGGCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLNTKLS*LPGPPS
Trigger: AGAGGGAGGGCCGGGAAGCCAGGAAAGCTTGGTGTT...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCAGTGAAAACATCCAGTaGCCAAGCCTCATCAATAAC +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALSENIQ*PSLINN
Trigger: GTTATTGATGAGGCTTGGCCACTGGATGTTTTCACT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCAATCCAGCAGCCAAGTaGTTTCAACAGACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALNPAAK*FQQTFY
Trigger: GTAGAAAGTCTGTTGAAACCACTTGGCTGCTGGATT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGTCCCTTTCACCCCCTaGCTGACCACCCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLVPFTP*LTTLLL
Trigger: AAGCAGAAGGGTGGTCAGCCAGGGGGTGAAAGGGAC...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617441.4
CDS-3UTR CCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCTTAACTGATTCACACTaGAAGAACAAATGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALLTDSH*KNKWPC
Trigger: GCAGGGCCATTTGTTCTTCCAGTGTGAATCAGTTAA...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615577.4
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGGCCATGTTGGAAACTTaGCCTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGAMLET*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAAGTTTCCAACATGGC...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS-3UTR TCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGCCCGAGAATATTAACTaGTTCACACTGGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPPENIN*FTLEEL
Trigger: CAGTTCTTCCAGTGTGAATCAGTTAATATTCTCGGG...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCGTCTTGACAGTAAAATaGCTGACTCCGGAAATCAAA +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALVLTVK*LTPEIK
Trigger: TTTGATTTCCGGAGTCAGTCATTTTACTGTCAAGAC...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AATCCTCCCACCAGAGATCAAGACCCCGGTCCCAGGCCTTTTACTGGCTGTGGATCTTCAACTGGTGTGTaGAGGAGAAGTTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: NPPTRDQDPGPRPFTGCGSSTGV*RRSFQT
Trigger: TGTTTGGAAACTTCTCCTTCACACACCAGTTGAAGA...TCCACAGCCAGTAAAAGGCCTGGGACCGGGGTCTTGATCTCTGGTGGGAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGTGTCCTCAGGACCTCTaGCGGCGATTTGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPECPQDL*RRFAEC
Trigger: ACATTCTGCAAATCGCCGTCAGAGGTCCTGAGGACA...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAAGGCCACCAACACGCACTTaGTGGAACTCAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: RKTDTYRLHFCQILPLERPPTRT*WNSASS
Trigger: GGAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGG...CCTTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTCCACCAACACGCACTTaGTGGAACTCAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCPPTRT*WNSASS
Trigger: GGAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGG...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAGGAAGGTCTCGGAGGTaGAGCGCACCAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKGRSRR*SAPTER
Trigger: CCTCTCTGTTGGTGCGCTTCACCTCCGAGACCTTCC...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTCTGGATGCCATCCATaGAGACGTCCACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLSGCHP*RRPPLC
Trigger: ACACAGGGGTGGACGTCTTCATGGATGGCATCCAGA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGTAGCCCTTGGCTCTaGCATCCTGGGCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLGSPWL*HPGPVS
Trigger: AGAAACTGGCCCAGGATGTCAGAGCCAAGGGCTACC...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTCCGATTGCTAAGGGCTaGGCACTCCAGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLPIAKG*ALQVAL
Trigger: AAGGGCTACCTGGAGTGCTCAGCCCTTAGCAATCGG...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TTCTACCTTAAGTTATGTAGTCCTCTGTTCTCCACTTTAACAGATGAGCAACACGTCTCCTGGCCTGGTTaGCGGCAGTTCGGACGGCGC +
Preference number: 4 (lower is better)
Translates to: FYLKLCSPLFSTLTDEQHVSWPG*RQFGRR
Trigger: GCGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGAC...GTGTTGCTCATCTGTTAAAGTGGAGAACAGAGGACTACATAACTTAAGGTAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCTACATAAGTGTTGTGTaGAGTCTCTTGGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALYISVV*SLLGFR
Trigger: TCTAAACCCCAAGAGACTTCACACAACACTTATGTA...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGCAGAGAAGTCTGAGTaGAGGCAGCTGTGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLAEKSE*RQLCQP
Trigger: GGGCTGACACAGCTGCCTTCACTCAGACTTCTCTGC...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGCCCCTACAAGGCTGGTaGGGGTCTGCTTGCTTTCTA +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLPLQGW*GSACFL
Trigger: TAGAAAGCAAGCAGACCCTCACCAGCCTTGTAGGGG...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAATGTTACTTCTCCCTaGCCATCCAAGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGNVTSP*PSKHRL
Trigger: CAGACGGTGCTTGGATGGGCAGGGAGAAGTAACATT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTAGCATCTTCCCAGCCTaGTGTCCTACTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCSIFPA*CPTLKS
Trigger: GGACTTCAGAGTAGGACAGCAGGCTGGGAAGATGCT...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAGCATCTTCCCAGCCTaGTGTCCTACTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPESIFPA*CPTLKS
Trigger: GGACTTCAGAGTAGGACAGCAGGCTGGGAAGATGCT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAACATCAGCACCACGTCTaGCTGCTGGTAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKHQHHV*LLVGQG
Trigger: CCCCTGTCCTACCAGCAGGCAGACGTGGTGCTGATG...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTGCGCACTCAAACACCTaGTGTACTCCCCGATTGCTA +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCAHSNT*CTPRLL
Trigger: TAGCAATCGGGGAGTACAGCAGGTGTTTGAGTGCGC...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGATGTTGGAAACTGGCTaGGAGACCCCTGTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEMLETG*ETPVPF
Trigger: GAAAGGGACAGGGGTCTCGCAGCCAGTTTCCAACAT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617441.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGCCACCCCAAGATGGTTaGGTTAGTGTGTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLPPQDG*VSVCGA
Trigger: TGCCCCACACACACTAACCCAACCATCTTGGGGTGG...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGATACAACAGTTGGGCTaGCAGGGAGTCCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLIQQLG*QGVHPK
Trigger: CTTGGGGTGGACTCCCTGCCAGCCCAACTGTTGTAT...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAAGGTTCTACTCCAAGAAGTaGCAAAGGCCCCGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: RKTDTYRLHFCQILPLERFYSKK*QRPRER
Trigger: ACGCTCTCGGGGCCTTTGCCACTTCTTGGAGTAGAA...CCTTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTTTCTACTCCAAGAAGTaGCAAAGGCCCCGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCFYSKK*QRPRER
Trigger: ACGCTCTCGGGGCCTTTGCCACTTCTTGGAGTAGAA...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGAGCCTAGTCTTCAACTaGTGTGTGAAGGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPSLVFN*CVKEKF
Trigger: AAACTTCTCCTTCACACACCAGTTGAAGACTAGGCT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAGAAAAGAGCCCTCAGTaGGCAGCTGCAGCACACGCC +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKEKSPQ*AAAAHA
Trigger: GGCGTGTGCTGCAGCTGCCCACTGAGGGCTCTTTTC...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGAGGCCCAGGCTGATCTaGATGCCATCCATGAAGACG +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLRPRLI*MPSMKT
Trigger: CGTCTTCATGGATGGCATCCAGATCAGCCTGGGCCT...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCTTGTGTGAAGTCTCTTaGGGTTTAGAAGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALLCEVS*GLEDLA
Trigger: TGCAAGATCTTCTAAACCCCAAGAGACTTCACACAA...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp CCTGGGGACACTGAGGAGACCAGGAGGCAGTGCTACCTTCAAGAACAGCAGTCTGTCTTGACAGTAAAATaGCTGACTCCGGAAATCAAA +
Preference number: 4 (lower is better)
Translates to: PGDTEETRRQCYLQEQQSVLTVK*LTPEIK
Trigger: TTTGATTTCCGGAGTCAGTCATTTTACTGTCAAGAC...AGACTGCTGTTCTTGAAGGTAGCACTGCCTCCTGGTCTCCTCAGTGTCCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGTCTTGACAGTAAAATaGCTGACTCCGGAAATCAAA +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPVLTVK*LTPEIK
Trigger: TTTGATTTCCGGAGTCAGTCATTTTACTGTCAAGAC...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAAGCACCGTCTGCTTTaGAAACCTCCAAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGKHRLL*KPPKPS
Trigger: ACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTGTCCTCAGGACCTCTaGCGGCGATTTGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLCPQDL*RRFAEC
Trigger: ACATTCTGCAAATCGCCGTCAGAGGTCCTGAGGACA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTCCTGCTGTCCTACTCTaGAGTCCAGAATCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLPAVLL*SPESQG
Trigger: TCCCTGGGATTCTGGACTTCAGAGTAGGACAGCAGG...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGCCACCAACACGCACTTaGTGGAACTCAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLPPTRT*WNSASS
Trigger: GGAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGG...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTTCTGGATGCCATCCATaGAGACGTCCACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLSGCHP*RRPPLC
Trigger: ACACAGGGGTGGACGTCTTCATGGATGGCATCCAGA...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAATCCCTTCCATGGCATTaGCGCAGGAGGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQSLPWH*RRRPCG
Trigger: CCCACAGGGCCTCCTGCGTCAATGCCATGGAAGGGA...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAGGTAGCCCTTGGCTCTaGCATCCTGGGCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKGSPWL*HPGPVS
Trigger: AGAAACTGGCCCAGGATGTCAGAGCCAAGGGCTACC...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAGATCTTGCACTCATTaGTGGAGAAGAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGRSCTH*WRRASF
Trigger: GAAGGAGGCTCTTCTCCATCAATGAGTGCAAGATCT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp CCTCTTCCTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCTTTGAGTTGTGTGTGTaGGAGCAGGTTGTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: PLPSLRIMYGGPSHFQIPFELCV*EQVVCE
Trigger: CTCGCACACAACCTGCTCTCACACACACAACTCAAA...GGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAGGAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp AATCCTCCCACCAGAGATCAAGACCCCGGTCCCAGGCCTTTTACTGGCTGTGGAGAAATTCCTTCCCACTaGCATGTTAAATACCTCTCA +
Preference number: 4 (lower is better)
Translates to: NPPTRDQDPGPRPFTGCGEIPSH*HVKYLS
Trigger: TGAGAGGTATTTAACATGTCAGTGGGAAGGAATTTC...TCCACAGCCAGTAAAAGGCCTGGGACCGGGGTCTTGATCTCTGGTGGGAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp GCAGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAAGACAGCCCACTGCAGTaGATAGAAATTCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: AGRQTLIGSISARFCHWKDSPLQ*IEIPSH
Trigger: GTGGGAAGGAATTTCTATTCACTGCAGTGGGCTGTC...TTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGACATCTGTTGCTTCCTaGTCTGGATGCTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPETSVAS*SGCWFH
Trigger: GTGGAACCAGCATCCAGATCAGGAAGCAACAGATGT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS-3UTR GCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGAAACTGTTGCAGAATaGCGAAGAAATGTCTTGACA +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPETVAE*RRNVLT
Trigger: TGTCAAGACATTTCTTCGGCATTCTGCAACAGTTTC...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381799.10
ENST00000614836.1
CDS-3UTR GCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTCCAAAAGGAGACGCTaGTTGGGGTGTACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLSKRRR*LGCTQR
Trigger: TCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp CTTAGAGGTGAGTACAAGCCACCGCCTGGAGAGCAGAGAAGTCTGAGTGAAGGCATTTCTGCCAGATTCTaGCACTGGAAAGGGTTTACA +
Preference number: 4 (lower is better)
Translates to: LRGEYKPPPGEQRSLSEGISARF*HWKGFT
Trigger: TGTAAACCCTTTCCAGTGGCAGAATCTGGCAGAAAT...GCCTTCACTCAGACTTCTCTGCTCTCCAGGCGGTGGCTTGTACTCACCTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCAAAACTGTTGCAGAATaGCGAAGAAATGTCTTGACA +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALKTVAE*RRNVLT
Trigger: TGTCAAGACATTTCTTCGGCATTCTGCAACAGTTTT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615577.4
CDS-3UTR GCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCATTAGCAAGTTCCTGTaGCTAAGTCAATTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALISKFL*LSQFPV
Trigger: TACAGGAAATTGACTTAGGCACAGGAACTTGCTAAT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTCCACCCCAAGATGGTTaGGTTAGTGTGTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLPPQDG*VSVCGA
Trigger: TGCCCCACACACACTAACCCAACCATCTTGGGGTGG...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTATACAACAGTTGGGCTaGCAGGGAGTCCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLIQQLG*QGVHPK
Trigger: CTTGGGGTGGACTCCCTGCCAGCCCAACTGTTGTAT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTTCTACTCCAAGAAGTaGCAAAGGCCCCGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLFYSKK*QRPRER
Trigger: ACGCTCTCGGGGCCTTTGCCACTTCTTGGAGTAGAA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTTGTTCTCGTACACTGTaGGCTTGTAGGCCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLCSRTL*ACRPPG
Trigger: TCCCGGAGGCCTACAAGCCCACAGTGTACGAGAACA...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTAGGCCCAGGCTGATCTaGATGCCATCCATGAAGACG +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLRPRLI*MPSMKT
Trigger: CGTCTTCATGGATGGCATCCAGATCAGCCTGGGCCT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGTTGTGTGAAGTCTCTTaGGGTTTAGAAGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPLCEVS*GLEDLA
Trigger: TGCAAGATCTTCTAAACCCCAAGAGACTTCACACAA...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTAAAGGAGACGCTGCTTaGGGTGTACCCAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCKGDAA*GVPREN
Trigger: GTTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTT...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAAGGGATTTTCTAACTaGCCTGGGCAAGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGKGFSN*PGQGVH
Trigger: GTGAACTCCTTGCCCAGGCCAGTTAGAAAATCCCTT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGAACACTACAAACATATaGCAGAGCTTCGTACAAGCA +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPNTTNI*QSFVQA
Trigger: TGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCTCTCTACCTGAAAGATaGTGTTTCAATCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALSLPER*CFNQSW
Trigger: CCAAGATTGATTGAAACACCATCTTTCAGGTAGAGA...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTACAAGCCACCGCCTaGAGAGCAGAGAAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLVQATA*RAEKSE
Trigger: CTCAGACTTCTCTGCTCTCCAGGCGGTGGCTTGTAC...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp CTGGGGACACTGAGGAGACCAGGAGGCAGTGCTACCTTCAAGAACAGCAGTCTATCTATAACCACTGTGTaGCACAGAAGCCCAATTACT +
Preference number: 4 (lower is better)
Translates to: LGTLRRPGGSATFKNSSLSITTV*HRSPIT
Trigger: AGTAATTGGGCTTCTGTGCCACACAGTGGTTATAGA...TAGACTGCTGTTCTTGAAGGTAGCACTGCCTCCTGGTCTCCTCAGTGTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAGCTGTATACCCACGTaGTGTTCACTTTCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGSCIPT*CSLSCC
Trigger: GCAACAGGAAAGTGAACACCACGTGGGTATACAGCT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610353.4
3UTR CAA 72 bp TTTCTTCTTACCCCTACAAGGCTGGTGAGGGTCTGCTaGCTTTCTATAACCACTGTGTGGCACAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: FLLTPTRLVRVC*LSITTVWHRSP
Trigger: TGGGCTTCTGTGCCACACAGTGGTTATAGAAAGCAAGCAGACCCTCACCAGCCTTGTAGGGGTAAGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTAAGCACCGTCTGCTTTaGAAACCTCCAAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCKHRLL*KPPKPS
Trigger: ACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTT...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAGCACCGTCTGCTTTaGAAACCTCCAAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEKHRLL*KPPKPS
Trigger: ACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTTGTCCTCAGGACCTCTaGCGGCGATTTGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLCPQDL*RRFAEC
Trigger: ACATTCTGCAAATCGCCGTCAGAGGTCCTGAGGACA...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCGGGGCCGGATGCTTCTaGAGGCGTCATTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFGAGCF*RRHCRL
Trigger: CAGCCGGCAATGACGCCTTCAGAAGCATCCGGCCCC...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGCTTCAAGTTCAGGAATaGGTTATGGTTGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGLQVQE*VMVGHR
Trigger: TCTGTGGCCAACCATAACTCATTCCTGAACTTGAAG...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TTCTACCTTAAGTTATGTAGTCCTCTGTTCTCCACTTTAACAGATGAGCAACACTCCCTTCCATGGCATTaGCGCAGGAGGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FYLKLCSPLFSTLTDEQHSLPWH*RRRPCG
Trigger: CCCACAGGGCCTCCTGCGTCAATGCCATGGAAGGGA...GTGTTGCTCATCTGTTAAAGTGGAGAACAGAGGACTACATAACTTAAGGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp GCAGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAAAGATCTTGCACTCATTaGTGGAGAAGAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AGRQTLIGSISARFCHWKRSCTH*WRRASF
Trigger: GAAGGAGGCTCTTCTCCATCAATGAGTGCAAGATCT...TTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTTTGCCTCAGCCTCTTaGGTAGCTAGAACTACAGGC +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLFASAS*VARTTG
Trigger: GCCTGTAGTTCTAGCTACTCAAGAGGCTGAGGCAAA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGGTCCTTTGGACTCGATaGAATCCTTCCGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEVLWTR*NPSVLQ
Trigger: TTGGAGAACGGAAGGATTTCATCGAGTCCAAAGGAC...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTGTCCGGCCCAGTTCTTaGTGTTTTAAAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCVRPSS*CFKGHL
Trigger: CAGATGTCCTTTAAAACATCAAGAACTGGGCCGGAC...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS-3UTR GCA 90 bp GCAGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAACATCCAAGCACCGTCTaGTTTGAAAACCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: AGRQTLIGSISARFCHWKHPSTV*FENLQS
Trigger: GCTTTGGAGGTTTTCAAAGCAGACGGTGCTTGGATG...TTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGAATGTTACTTCTCCCTaGCCATCCAAGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLNVTSP*PSKHRL
Trigger: CAGACGGTGCTTGGATGGGCAGGGAGAAGTAACATT...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTCCTCTGACGGCGATTTaGAGAATGTTACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCPLTAI*RMLLLP
Trigger: AGGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGG...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTAGCATCTTCCCAGCCTaGTGTCCTACTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLSIFPA*CPTLKS
Trigger: GGACTTCAGAGTAGGACAGCAGGCTGGGAAGATGCT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGCGCACTCAAACACCTaGTGTACTCCCCGATTGCTA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLAHSNT*CTPRLL
Trigger: TAGCAATCGGGGAGTACAGCAGGTGTTTGAGTGCGC...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTTCCAAAAGGAGACGCTaGTTGGGGTGTACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLSKRRR*LGCTQR
Trigger: TCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGA...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AAGGCTGGTGAGGGTCTGCTTGCTTTCTATAACCACTGTGTGGCACAGAAGCCCAAGTTCTGTTGCCATTaGTTGGAGCAGTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: KAGEGLLAFYNHCVAQKPKFCCH*LEQSDS
Trigger: AGAATCAGACTGCTCCAAGCAATGGCAACAGAACTT...GGGCTTCTGTGCCACACAGTGGTTATAGAAAGCAAGCAGACCCTCACCAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp CCTGGGGACACTGAGGAGACCAGGAGGCAGTGCTACCTTCAAGAACAGCAGTCTAATCAAAGTCATTTATaGCAGCCACCTTACCTTTTG +
Preference number: 4 (lower is better)
Translates to: PGDTEETRRQCYLQEQQSNQSHL*QPPYLL
Trigger: CAAAAGGTAAGGTGGCTGGCATAAATGACTTTGATT...AGACTGCTGTTCTTGAAGGTAGCACTGCCTCCTGGTCTCCTCAGTGTCCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp CACGCCCTGCCCAACCCAGCCTTTGCAATTTCTACCTTAAGTTATGTAGTCCTCAGGCTGGTGAGGGTCTaGTTGCTTTCTATAACCACT +
Preference number: 4 (lower is better)
Translates to: HALPNPAFAISTLSYVVLRLVRV*LLSITT
Trigger: AGTGGTTATAGAAAGCAAGCAGACCCTCACCAGCCT...GAGGACTACATAACTTAAGGTAGAAATTGCAAAGGCTGGGTTGGGCAGGGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGCCACCTGTTGCAGAATaGCGAAGAAATGTCTTGACA +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGPPVAE*RRNVLT
Trigger: TGTCAAGACATTTCTTCGGCATTCTGCAACAGGTGG...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615083.4
CDS-3UTR GCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTGCATCCTCGTGCTGTTaGAGAATGCCGAAGAAATGT +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCASSCC*RMPKKC
Trigger: ACATTTCTTCGGCATTCTGCAACAGCACGAGGATGC...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622175.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTTTCTACTCCAAGAAGTaGCAAAGGCCCCGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLFYSKK*QRPRER
Trigger: ACGCTCTCGGGGCCTTTGCCACTTCTTGGAGTAGAA...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAAGGCCCAGGCTGATCTaGATGCCATCCATGAAGACG +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKRPRLI*MPSMKT
Trigger: CGTCTTCATGGATGGCATCCAGATCAGCCTGGGCCT...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGGGAATGAGTTATGGTTaGCCACAGAGTAGCACATCA +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGGMSYG*PQSSTS
Trigger: TGATGTGCTACTCTGTGGCCAACCATAACTCATTCC...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAGGGATTTTCTAACTaGCCTGGGCAAGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEKGFSN*PGQGVH
Trigger: GTGAACTCCTTGCCCAGGCCAGTTAGAAAATCCCTT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTAAGGGATTTTCTAACTaGCCTGGGCAAGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCKGFSN*PGQGVH
Trigger: GTGAACTCCTTGCCCAGGCCAGTTAGAAAATCCCTT...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGTCTCTACCTGAAAGATaGTGTTTCAATCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPSLPER*CFNQSW
Trigger: CCAAGATTGATTGAAACACCATCTTTCAGGTAGAGA...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGGTTAAATACCTCTCATaGCAAAGGCTGGCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEVKYLS*QRLALN
Trigger: GTTCAGGGCCAGCCTTTGCCATGAGAGGTATTTAAC...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTGTTGGAAAGGTTTCTaGGGCCCTGGTAGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLCWKGF*GPGRRV
Trigger: AACTCTCCTACCAGGGCCCCAGAAACCTTTCCAACA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615083.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGCCATGTTGGAAACTTaGCCTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLAMLET*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAAGTTTCCAACATGGC...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGCCCGAGAATATTAACTaGTTCACACTGGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGPENIN*FTLEEL
Trigger: CAGTTCTTCCAGTGTGAATCAGTTAATATTCTCGGG...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTCTTCAACTGGTGTGTaGAGGAGAAGTTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGSSTGV*RRSFQT
Trigger: TGTTTGGAAACTTCTCCTTCACACACCAGTTGAAGA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAATGTCCTCAGGACCTCTaGCGGCGATTTGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKCPQDL*RRFAEC
Trigger: ACATTCTGCAAATCGCCGTCAGAGGTCCTGAGGACA...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp CCTCTTCCTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCCTTCAAGTTCAGGAATaGGTTATGGTTGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: PLPSLRIMYGGPSHFQIPLQVQE*VMVGHR
Trigger: TCTGTGGCCAACCATAACTCATTCCTGAACTTGAAG...GGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAGGAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTCTTCAAGTTCAGGAATaGGTTATGGTTGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCLQVQE*VMVGHR
Trigger: TCTGTGGCCAACCATAACTCATTCCTGAACTTGAAG...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCTCCCTTCCATGGCATTaGCGCAGGAGGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFSLPWH*RRRPCG
Trigger: CCCACAGGGCCTCCTGCGTCAATGCCATGGAAGGGA...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGAGATCTTGCACTCATTaGTGGAGAAGAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLRSCTH*WRRASF
Trigger: GAAGGAGGCTCTTCTCCATCAATGAGTGCAAGATCT...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTCCACCCTTCTGCTTCTaGAGAACTGGTTTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLPPFCF*RTGFLC
Trigger: GCACAGAAAACCAGTTCTTCAGAAGCAGAAGGGTGG...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617441.4
CDS-3UTR GCA 90 bp AAGGCTGGTGAGGGTCTGCTTGCTTTCTATAACCACTGTGTGGCACAGAAGCCCCATGTTGGAAACTGTTaGAGAATGCCGAAGAAATGT +
Preference number: 4 (lower is better)
Translates to: KAGEGLLAFYNHCVAQKPHVGNC*RMPKKC
Trigger: ACATTTCTTCGGCATTCTGCAACAGTTTCCAACATG...GGGCTTCTGTGCCACACAGTGGTTATAGAAAGCAAGCAGACCCTCACCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTAATGTTACTTCTCCCTaGCCATCCAAGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLNVTSP*PSKHRL
Trigger: CAGACGGTGCTTGGATGGGCAGGGAGAAGTAACATT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAGCGCACTCAAACACCTaGTGTACTCCCCGATTGCTA +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKAHSNT*CTPRLL
Trigger: TAGCAATCGGGGAGTACAGCAGGTGTTTGAGTGCGC...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAATCCAAAAGGAGACGCTaGTTGGGGTGTACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKSKRRR*LGCTQR
Trigger: TCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGA...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp CACGCCCTGCCCAACCCAGCCTTTGCAATTTCTACCTTAAGTTATGTAGTCCTCTTCGAGCAATTCTTTTaGCTCAGCCTCTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: HALPNPAFAISTLSYVVLFEQFF*LSLLSS
Trigger: GCTACTCAAGAGGCTGAGGCAAAAGAATTGCTCGAA...GAGGACTACATAACTTAAGGTAGAAATTGCAAAGGCTGGGTTGGGCAGGGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp AATCCTCCCACCAGAGATCAAGACCCCGGTCCCAGGCCTTTTACTGGCTGTGGAGCAAAAGTAAGTATGTaGTTATGTAGAACACACAAC +
Preference number: 4 (lower is better)
Translates to: NPPTRDQDPGPRPFTGCGAKVSM*LCRTHN
Trigger: GTTGTGTGTTCTACATAAGCACATACTTACTTTTGC...TCCACAGCCAGTAAAAGGCCTGGGACCGGGGTCTTGATCTCTGGTGGGAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTTAAAGGACATCTGTTaGTTCCTGATCTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGLKDIC*FLIWML
Trigger: CAGCATCCAGATCAGGAAGCAACAGATGTCCTTTAA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS-3UTR CCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAATTCTACTCCAAGAAGTaGCAAAGGCCCCGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKFYSKK*QRPRER
Trigger: ACGCTCTCGGGGCCTTTGCCACTTCTTGGAGTAGAA...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGGGAATGAGTTATGGTTaGCCACAGAGTAGCACATCA +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEGMSYG*PQSSTS
Trigger: TGATGTGCTACTCTGTGGCCAACCATAACTCATTCC...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCTCCCGCTGGTCAGTCTaGGTGGCCACCACCAGCACA +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFSRWSV*VATTST
Trigger: TGTGCTGGTGGTGGCCACCCAGACTGACCAGCGGGA...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAATTTCGTCTCCTGGCCTaGTTGACGGCAGTTCGGACG +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQFRLLA*LTAVRT
Trigger: CGTCCGAACTGCCGTCAACCAGGCCAGGAGACGAAA...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAGTGAAAACATCCAGTaGCCAAGCCTCATCAATAAC +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGSENIQ*PSLINN
Trigger: GTTATTGATGAGGCTTGGCCACTGGATGTTTTCACT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGAAGGGATTTTCTAACTaGCCTGGGCAAGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLKGFSN*PGQGVH
Trigger: GTGAACTCCTTGCCCAGGCCAGTTAGAAAATCCCTT...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAATCCAGCAGCCAAGTaGTTTCAACAGACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGNPAAK*FQQTFY
Trigger: GTAGAAAGTCTGTTGAAACCACTTGGCTGCTGGATT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGCCCGAGAATATTAACTaGTTCACACTGGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEPENIN*FTLEEL
Trigger: CAGTTCTTCCAGTGTGAATCAGTTAATATTCTCGGG...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGTCTTCAACTGGTGTGTaGAGGAGAAGTTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPESSTGV*RRSFQT
Trigger: TGTTTGGAAACTTCTCCTTCACACACCAGTTGAAGA...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCGGAAGGTCTCGGAGGTaGAGCGCACCAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFGRSRR*SAPTER
Trigger: CCTCTCTGTTGGTGCGCTTCACCTCCGAGACCTTCC...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAATCTGGATGCCATCCATaGAGACGTCCACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQSGCHP*RRPPLC
Trigger: ACACAGGGGTGGACGTCTTCATGGATGGCATCCAGA...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTAGATCTTGCACTCATTaGTGGAGAAGAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLRSCTH*WRRASF
Trigger: GAAGGAGGCTCTTCTCCATCAATGAGTGCAAGATCT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTACATAAGTGTTGTGTaGAGTCTCTTGGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGYISVV*SLLGFR
Trigger: TCTAAACCCCAAGAGACTTCACACAACACTTATGTA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAAATTAACAGAACTTTaGGACCCCTGTCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGKLTEL*DPCLSQ
Trigger: CTGTGAAAGACAGGGGTCTCAAAGTTCTGTTAATTT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGATTGCCAGTTTTAGATaGTCTGGTACAGTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLIASFR*SGTVQR
Trigger: ACGCTGGACTGTACCAGATCATCTAAAACTGGCAAT...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617441.4
CDS-3UTR GCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAAATGTTACTTCTCCCTaGCCATCCAAGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKNVTSP*PSKHRL
Trigger: CAGACGGTGCTTGGATGGGCAGGGAGAAGTAACATT...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTCCTCTGACGGCGATTTaGAGAATGTTACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLPLTAI*RMLLLP
Trigger: AGGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGG...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGCAAATATCCCTGTTaGAGAATGCCGAAGAAATGT +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGCKYPC*RMPKKC
Trigger: ACATTTCTTCGGCATTCTGCAACAGGGATATTTGCA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619474.4
CDS-3UTR CCA 90 bp GCAGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAAAGCCTAGTCTTCAACTaGTGTGTGAAGGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: AGRQTLIGSISARFCHWKSLVFN*CVKEKF
Trigger: AAACTTCTCCTTCACACACCAGTTGAAGACTAGGCT...TTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAGCCTAGTCTTCAACTaGTGTGTGAAGGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPESLVFN*CVKEKF
Trigger: AAACTTCTCCTTCACACACCAGTTGAAGACTAGGCT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAATGTTCTCGTACACTGTaGGCTTGTAGGCCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQCSRTL*ACRPPG
Trigger: TCCCGGAGGCCTACAAGCCCACAGTGTACGAGAACA...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGAATGAGTTATGGTTaGCCACAGAGTAGCACATCA +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLGMSYG*PQSSTS
Trigger: TGATGTGCTACTCTGTGGCCAACCATAACTCATTCC...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTTGTGTGAAGTCTCTTaGGGTTTAGAAGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGLCEVS*GLEDLA
Trigger: TGCAAGATCTTCTAAACCCCAAGAGACTTCACACAA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGCTCCCCATTAGTCTTTaGGGTGCATACATAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPELPISL*GAYISV
Trigger: AACACTTATGTATGCACCCCAAAGACTAATGGGGAG...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTCTCCCCATTAGTCTTTaGGGTGCATACATAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCLPISL*GAYISV
Trigger: AACACTTATGTATGCACCCCAAAGACTAATGGGGAG...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAAAAGGAGACGCTGCTTaGGGTGTACCCAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKKGDAA*GVPREN
Trigger: GTTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTT...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
47% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GCAGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAAAGTGAAAACATCCAGTaGCCAAGCCTCATCAATAAC +
Preference number: 4 (lower is better)
Translates to: AGRQTLIGSISARFCHWKSENIQ*PSLINN
Trigger: GTTATTGATGAGGCTTGGCCACTGGATGTTTTCACT...TTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAGTGAAAACATCCAGTaGCCAAGCCTCATCAATAAC +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPESENIQ*PSLINN
Trigger: GTTATTGATGAGGCTTGGCCACTGGATGTTTTCACT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAACACTACAAACATATaGCAGAGCTTCGTACAAGCA +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGNTTNI*QSFVQA
Trigger: TGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAATCCAGCAGCCAAGTaGTTTCAACAGACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPENPAAK*FQQTFY
Trigger: GTAGAAAGTCTGTTGAAACCACTTGGCTGCTGGATT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGAGGTCCCTGCTTACATaGAGTGAATCAAGGGTGATA +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLRSLLT*SESRVI
Trigger: TATCACCCTTGATTCACTCCATGTAAGCAGGGACCT...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619474.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGCATGTTGGAAACAAATaGCCCTGCAGTGTTCACTTC +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLHVGNK*PCSVHF
Trigger: GAAGTGAACACTGCAGGGCCATTTGTTTCCAACATG...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613272.4
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGCCCGAGAATATTAACTaGTTCACACTGGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLPENIN*FTLEEL
Trigger: CAGTTCTTCCAGTGTGAATCAGTTAATATTCTCGGG...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGGTCTTGACAGTAAAATaGCTGACTCCGGAAATCAAA +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEVLTVK*LTPEIK
Trigger: TTTGATTTCCGGAGTCAGTCATTTTACTGTCAAGAC...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTGTCTTGACAGTAAAATaGCTGACTCCGGAAATCAAA +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCVLTVK*LTPEIK
Trigger: TTTGATTTCCGGAGTCAGTCATTTTACTGTCAAGAC...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTCTTCAACTGGTGTGTaGAGGAGAAGTTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLSSTGV*RRSFQT
Trigger: TGTTTGGAAACTTCTCCTTCACACACCAGTTGAAGA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAAAGCACCGTCTGCTTTaGAAACCTCCAAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKKHRLL*KPPKPS
Trigger: ACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTT...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAATGTCCTCAGGACCTCTaGCGGCGATTTGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQCPQDL*RRFAEC
Trigger: ACATTCTGCAAATCGCCGTCAGAGGTCCTGAGGACA...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAACCACCAACACGCACTTaGTGGAACTCAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQPPTRT*WNSASS
Trigger: GGAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGG...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTCTTCAAGTTCAGGAATaGGTTATGGTTGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLLQVQE*VMVGHR
Trigger: TCTGTGGCCAACCATAACTCATTCCTGAACTTGAAG...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCCCGATTGCTAAGGGCTaGGCACTCCAGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFPIAKG*ALQVAL
Trigger: AAGGGCTACCTGGAGTGCTCAGCCCTTAGCAATCGG...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTTACATAAGTGTTGTGTaGAGTCTCTTGGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCYISVV*SLLGFR
Trigger: TCTAAACCCCAAGAGACTTCACACAACACTTATGTA...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGAGCAATCCGAATGTaGCAAAAGAGATTAGCAAGT +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLGAIRM*QKRLAS
Trigger: ACTTGCTAATCTCTTTTGTCACATTCGGATTGCTCC...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAAGGGAAACTGTTGCAGAATaGCGAAGAAATGTCTTGACA +
Preference number: 4 (lower is better)
Translates to: RKTDTYRLHFCQILPLERETVAE*RRNVLT
Trigger: TGTCAAGACATTTCTTCGGCATTCTGCAACAGTTTC...CCTTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAACCTCTGACGGCGATTTaGAGAATGTTACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKPLTAI*RMLLLP
Trigger: AGGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGG...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAATCCAAAAGGAGACGCTaGTTGGGGTGTACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQSKRRR*LGCTQR
Trigger: TCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGA...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAGTGACACTCTCTTaGTTCTGTTCCAAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPEKVTLS*FCSKFC
Trigger: ACAGAACTTGGAACAGAAGCAAGAGAGTGTCACTTT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGAAACAGAAGGTCCCTaGTTACATGGAGTGAATCAA +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLETEGP*LHGVNQ
Trigger: TTGATTCACTCCATGTAAGCAGGGACCTTCTGTTTC...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619474.4
CDS-3UTR GCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAGGAAACAAATGGCCCTaGAGTGTTCACTTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKGNKWP*SVHFRG
Trigger: ACCTCTGAAGTGAACACTGCAGGGCCATTTGTTTCC...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613272.4
CDS-3UTR GCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTTAAAGGACATCTGTTaGTTCCTGATCTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLLKDIC*FLIWML
Trigger: CAGCATCCAGATCAGGAAGCAACAGATGTCCTTTAA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGAGCCTAGTCTTCAACTaGTGTGTGAAGGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLSLVFN*CVKEKF
Trigger: AAACTTCTCCTTCACACACCAGTTGAAGACTAGGCT...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCTTTCGTCTCCTGGCCTaGTTGACGGCAGTTCGGACG +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFFRLLA*LTAVRT
Trigger: CGTCCGAACTGCCGTCAACCAGGCCAGGAGACGAAA...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp CCTCTTCCTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCTTGTGTGAAGTCTCTTaGGGTTTAGAAGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: PLPSLRIMYGGPSHFQIPLCEVS*GLEDLA
Trigger: TGCAAGATCTTCTAAACCCCAAGAGACTTCACACAA...GGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAGGAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTTTGTGTGAAGTCTCTTaGGGTTTAGAAGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCLCEVS*GLEDLA
Trigger: TGCAAGATCTTCTAAACCCCAAGAGACTTCACACAA...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGAGTGAAAACATCCAGTaGCCAAGCCTCATCAATAAC +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLSENIQ*PSLINN
Trigger: GTTATTGATGAGGCTTGGCCACTGGATGTTTTCACT...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGAATCCAGCAGCCAAGTaGTTTCAACAGACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLNPAAK*FQQTFY
Trigger: GTAGAAAGTCTGTTGAAACCACTTGGCTGCTGGATT...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTCTCTACCTGAAAGATaGTGTTTCAATCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: SSGQASSITVSKRRRCLGSLPER*CFNQSW
Trigger: CCAAGATTGATTGAAACACCATCTTTCAGGTAGAGA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTAGGGAACAGAGAAACTaGTTTGGCTATGTCAACATA +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCREQRN*FGYVNI
Trigger: TATGTTGACATAGCCAAACCAGTTTCTCTGTTCCCT...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAGCCTTTTACTGGCTGTaGATAGGAGGAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKAFYWL*IGGERE
Trigger: TTCTCTCTCTCCTCCTATCCACAGCCAGTAAAAGGC...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTTCTTCAACTGGTGTGTaGAGGAGAAGTTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLSSTGV*RRSFQT
Trigger: TGTTTGGAAACTTCTCCTTCACACACCAGTTGAAGA...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAACTTCAAGTTCAGGAATaGGTTATGGTTGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKLQVQE*VMVGHR
Trigger: TCTGTGGCCAACCATAACTCATTCCTGAACTTGAAG...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGAGCAATCCGAATGTaGCAAAAGAGATTAGCAAGT +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLGAIRM*QKRLAS
Trigger: ACTTGCTAATCTCTTTTGTCACATTCGGATTGCTCC...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTGGTTTGGTACTTTGTTaGAATGCAAATATCCCTGTT +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCGLVLC*NANIPV
Trigger: AACAGGGATATTTGCATTTCAACAAAGTACCAAACC...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619474.4
CDS-3UTR GCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAATGTTACTTCTCCCTaGCCATCCAAGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQNVTSP*PSKHRL
Trigger: CAGACGGTGCTTGGATGGGCAGGGAGAAGTAACATT...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAAGGATTGATCTATCTAGGTaGCAGCCTTTGCAATTTCTT +
Preference number: 4 (lower is better)
Translates to: RKTDTYRLHFCQILPLERIDLSR*QPLQFL
Trigger: AAGAAATTGCAAAGGCTGGCACCTAGATAGATCAAT...CCTTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAAAGAACAAATGGCCCTaGAGTGTTCACTTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKKNKWP*SVHFRG
Trigger: ACCTCTGAAGTGAACACTGCAGGGCCATTTGTTCTT...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000615577.4
CDS-3UTR GCA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTATTAGCAAGTTCCTGTaGCTAAGTCAATTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: SGQASSITVSKRRRCLGCISKFL*LSQFPV
Trigger: TACAGGAAATTGACTTAGGCACAGGAACTTGCTAAT...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCATACAACAGTTGGGCTaGCAGGGAGTCCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFIQQLG*QGVHPK
Trigger: CTTGGGGTGGACTCCCTGCCAGCCCAACTGTTGTAT...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTTGTGTGAAGTCTCTTaGGGTTTAGAAGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLLCEVS*GLEDLA
Trigger: TGCAAGATCTTCTAAACCCCAAGAGACTTCACACAA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTCTCCCCATTAGTCTTTaGGGTGCATACATAAGTGTT +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLLPISL*GAYISV
Trigger: AACACTTATGTATGCACCCCAAAGACTAATGGGGAG...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAAGGAGACGCTGCTTaGGGTGTACCCAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQKGDAA*GVPREN
Trigger: GTTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTT...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTAGTGAAAACATCCAGTaGCCAAGCCTCATCAATAAC +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLSENIQ*PSLINN
Trigger: GTTATTGATGAGGCTTGGCCACTGGATGTTTTCACT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTAATCCAGCAGCCAAGTaGTTTCAACAGACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLNPAAK*FQQTFY
Trigger: GTAGAAAGTCTGTTGAAACCACTTGGCTGCTGGATT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GCAGGAAGACAGACACTTATCGGCTCCATTTCTGCCAGATTCTGCCACTGGAAATCTCTACCTGAAAGATaGTGTTTCAATCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: AGRQTLIGSISARFCHWKSLPER*CFNQSW
Trigger: CCAAGATTGATTGAAACACCATCTTTCAGGTAGAGA...TTTCCAGTGGCAGAATCTGGCAGAAATGGAGCCGATAAGTGTCTGTCTTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGTCTCTACCTGAAAGATaGTGTTTCAATCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: SLINNCIQKETLLGVYPESLPER*CFNQSW
Trigger: CCAAGATTGATTGAAACACCATCTTTCAGGTAGAGA...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTCTTGACAGTAAAATaGCTGACTCCGGAAATCAAA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLVLTVK*LTPEIK
Trigger: TTTGATTTCCGGAGTCAGTCATTTTACTGTCAAGAC...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGCACCGTCTGCTTTaGAAACCTCCAAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQKHRLL*KPPKPS
Trigger: ACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTT...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTTACATAAGTGTTGTGTaGAGTCTCTTGGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLYISVV*SLLGFR
Trigger: TCTAAACCCCAAGAGACTTCACACAACACTTATGTA...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAACCTCTGACGGCGATTTaGAGAATGTTACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQPLTAI*RMLLLP
Trigger: AGGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGG...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCAGCATCTTCCCAGCCTaGTGTCCTACTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFSIFPA*CPTLKS
Trigger: GGACTTCAGAGTAGGACAGCAGGCTGGGAAGATGCT...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCTCCAAAAGGAGACGCTaGTTGGGGTGTACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFSKRRR*LGCTQR
Trigger: TCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGA...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTAGAACTGGTTTTCTGTaGCTGGAATTGCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLRTGFL*LELPVL
Trigger: TAAAACTGGCAATTCCAGGCACAGAAAACCAGTTCT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617441.4
CDS-3UTR GCA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGATTAGCAAGTTCCTGTaGCTAAGTCAATTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: TSSGQASSITVSKRRRCLISKFL*LSQFPV
Trigger: TACAGGAAATTGACTTAGGCACAGGAACTTGCTAAT...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTTTTCCTGTTGCAGAATaGCGAAGAAATGTCTTGACA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLFPVAE*RRNVLT
Trigger: TGTCAAGACATTTCTTCGGCATTCTGCAACAGGAAA...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610353.4
CDS-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCTTCTACTCCAAGAAGTaGCAAAGGCCCCGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFFYSKK*QRPRER
Trigger: ACGCTCTCGGGGCCTTTGCCACTTCTTGGAGTAGAA...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAAGCCTAGTCTTCAACTaGTGTGTGAAGGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKSLVFN*CVKEKF
Trigger: AAACTTCTCCTTCACACACCAGTTGAAGACTAGGCT...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTTTGTGTGAAGTCTCTTaGGGTTTAGAAGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLLCEVS*GLEDLA
Trigger: TGCAAGATCTTCTAAACCCCAAGAGACTTCACACAA...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TTCTACCTTAAGTTATGTAGTCCTCTGTTCTCCACTTTAACAGATGAGCAACACAAAGGAGACGCTGCTTaGGGTGTACCCAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: FYLKLCSPLFSTLTDEQHKGDAA*GVPREN
Trigger: GTTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTT...GTGTTGCTCATCTGTTAAAGTGGAGAACAGAGGACTACATAACTTAAGGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGGATTTTCTAACTaGCCTGGGCAAGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQKGFSN*PGQGVH
Trigger: GTGAACTCCTTGCCCAGGCCAGTTAGAAAATCCCTT...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTAACACTACAAACATATaGCAGAGCTTCGTACAAGCA +
Preference number: 4 (lower is better)
Translates to: NIQWPSLINNCIQKETLLNTTNI*QSFVQA
Trigger: TGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAATACATAAGTGTTGTGTaGAGTCTCTTGGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKYISVV*SLLGFR
Trigger: TCTAAACCCCAAGAGACTTCACACAACACTTATGTA...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCGAACACCCGCATCCGTaGTTTAAGACTCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFEHPHP*FKTLWV
Trigger: AACCCACAGAGTCTTAAATCACGGATGCGGGTGTTC...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAACATGTTGGAAACTGTTaGAGAATGCCGAAGAAATGT +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKHVGNC*RMPKKC
Trigger: ACATTTCTTCGGCATTCTGCAACAGTTTCCAACATG...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381799.10
ENST00000614836.1
CDS-3UTR CCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAGGAATGAGTTATGGTTaGCCACAGAGTAGCACATCA +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQGMSYG*PQSSTS
Trigger: TGATGTGCTACTCTGTGGCCAACCATAACTCATTCC...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAAACACTACAAACATATaGCAGAGCTTCGTACAAGCA +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKNTTNI*QSFVQA
Trigger: TGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTT...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp TTCTACCTTAAGTTATGTAGTCCTCTGTTCTCCACTTTAACAGATGAGCAACACTTCAACAAAAGCAGGTaGAAACAAAAGCGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: FYLKLCSPLFSTLTDEQHFNKSR*KQKRPK
Trigger: CTTGGGCCGCTTTTGTTTTCACCTGCTTTTGTTGAA...GTGTTGCTCATCTGTTAAAGTGGAGAACAGAGGACTACATAACTTAAGGTAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAGGAGCAATCCGAATGTaGCAAAAGAGATTAGCAAGT +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQGAIRM*QKRLAS
Trigger: ACTTGCTAATCTCTTTTGTCACATTCGGATTGCTCC...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCGTCCGGCCCAGTTCTTaGTGTTTTAAAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFVRPSS*CFKGHL
Trigger: CAGATGTCCTTTAAAACATCAAGAACTGGGCCGGAC...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS-3UTR GCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCCCTCTGACGGCGATTTaGAGAATGTTACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFPLTAI*RMLLLP
Trigger: AGGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGG...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAGGTACTTTGTTGAAATaGAAATATCCCTGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKGTLLK*KYPCCR
Trigger: TCTGCAACAGGGATATTTGCATTTCAACAAAGTACC...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619474.4
CDS-3UTR CCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAGCCTAGTCTTCAACTaGTGTGTGAAGGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQSLVFN*CVKEKF
Trigger: AAACTTCTCCTTCACACACCAGTTGAAGACTAGGCT...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAGTGAAAACATCCAGTaGCCAAGCCTCATCAATAAC +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQSENIQ*PSLINN
Trigger: GTTATTGATGAGGCTTGGCCACTGGATGTTTTCACT...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAATCCAGCAGCCAAGTaGTTTCAACAGACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQNPAAK*FQQTFY
Trigger: GTAGAAAGTCTGTTGAAACCACTTGGCTGCTGGATT...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAATCTCTACCTGAAAGATaGTGTTTCAATCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKSLPER*CFNQSW
Trigger: CCAAGATTGATTGAAACACCATCTTTCAGGTAGAGA...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCCACTGGAAGAACAAATaGCCCTGCAGTGTTCACTTC +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFHWKNK*PCSVHF
Trigger: GAAGTGAACACTGCAGGGCCATTTGTTCTTCCAGTG...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615577.4
CDS-3UTR TCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCCTTCAAGTTCAGGAATaGGTTATGGTTGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFLQVQE*VMVGHR
Trigger: TCTGTGGCCAACCATAACTCATTCCTGAACTTGAAG...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAATACATAAGTGTTGTGTaGAGTCTCTTGGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQYISVV*SLLGFR
Trigger: TCTAAACCCCAAGAGACTTCACACAACACTTATGTA...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp ATTTTGAAGTATAAGAAACCTGTGTCTGCATCTAGGCAGGCAAAAGTAAGTATGTGTTCCAAGTTCTGTTaGCATTGCTTGGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: ILKYKKPVSASRQAKVSMCSKFC*HCLEQS
Trigger: AGACTGCTCCAAGCAATGGCAACAGAACTTGGAACA...CATACTTACTTTTGCCTGCCTAGATGCAGACACAGGTTTCTTATACTTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCCGTGCTGTTGCAGAATaGCGAAGAAATGTCTTGACA +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFRAVAE*RRNVLT
Trigger: TGTCAAGACATTTCTTCGGCATTCTGCAACAGCACG...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622175.4
CDS-3UTR GCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAATGTTCACTTTCCTGTTaGAGAATGCCGAAGAAATGT +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQCSLSC*RMPKKC
Trigger: ACATTTCTTCGGCATTCTGCAACAGGAAAGTGAACA...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610353.4
CDS-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCGGAATGAGTTATGGTTaGCCACAGAGTAGCACATCA +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFGMSYG*PQSSTS
Trigger: TGATGTGCTACTCTGTGGCCAACCATAACTCATTCC...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAATTGTGTGAAGTCTCTTaGGGTTTAGAAGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQLCEVS*GLEDLA
Trigger: TGCAAGATCTTCTAAACCCCAAGAGACTTCACACAA...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAACACTACAAACATATaGCAGAGCTTCGTACAAGCA +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQNTTNI*QSFVQA
Trigger: TGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTT...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCGCCAGATTCTGCCACTaGAAAGGGTTTACACATAGA +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFARFCH*KGFTHR
Trigger: TCTATGTGTAAACCCTTTCCAGTGGCAGAATCTGGC...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp TTCTACCTTAAGTTATGTAGTCCTCTGTTCTCCACTTTAACAGATGAGCAACACCTCCACTTTAACAGATaGGCAACACCATTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: FYLKLCSPLFSTLTDEQHLHFNR*ATPLLL
Trigger: TAAAAGCAATGGTGTTGCTCATCTGTTAAAGTGGAG...GTGTTGCTCATCTGTTAAAGTGGAGAACAGAGGACTACATAACTTAAGGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR TCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCGGAGCAATCCGAATGTaGCAAAAGAGATTAGCAAGT +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFGAIRM*QKRLAS
Trigger: ACTTGCTAATCTCTTTTGTCACATTCGGATTGCTCC...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR GCA 90 bp ATTTTGAAGTATAAGAAACCTGTGTCTGCATCTAGGCAGGCAAAAGTAAGTATGGCCCAACCCAGCCTTTaGAATTTCTACCTTAAGTTA +
Preference number: 4 (lower is better)
Translates to: ILKYKKPVSASRQAKVSMAQPSL*NFYLKL
Trigger: TAACTTAAGGTAGAAATTGCAAAGGCTGGGTTGGGC...CATACTTACTTTTGCCTGCCTAGATGCAGACACAGGTTTCTTATACTTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR GCA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAATTAGCAAGTTCCTGTaGCTAAGTCAATTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: SVVSENIQWPSLINNCIQISKFL*LSQFPV
Trigger: TACAGGAAATTGACTTAGGCACAGGAACTTGCTAAT...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCAGCCTAGTCTTCAACTaGTGTGTGAAGGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFSLVFN*CVKEKF
Trigger: AAACTTCTCCTTCACACACCAGTTGAAGACTAGGCT...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCCTCCCCATTAGTCTTTaGGGTGCATACATAAGTGTT +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFLPISL*GAYISV
Trigger: AACACTTATGTATGCACCCCAAAGACTAATGGGGAG...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CCA 90 bp TTCTACCTTAAGTTATGTAGTCCTCTGTTCTCCACTTTAACAGATGAGCAACACAACACTACAAACATATaGCAGAGCTTCGTACAAGCA +
Preference number: 4 (lower is better)
Translates to: FYLKLCSPLFSTLTDEQHNTTNI*QSFVQA
Trigger: TGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTT...GTGTTGCTCATCTGTTAAAGTGGAGAACAGAGGACTACATAACTTAAGGTAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCAATCCAGCAGCCAAGTaGTTTCAACAGACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFNPAAK*FQQTFY
Trigger: GTAGAAAGTCTGTTGAAACCACTTGGCTGCTGGATT...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCTACATAAGTGTTGTGTaGAGTCTCTTGGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFYISVV*SLLGFR
Trigger: TCTAAACCCCAAGAGACTTCACACAACACTTATGTA...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR TCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCCCCGAGAATATTAACTaGTTCACACTGGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFPENIN*FTLEEQ
Trigger: TTGTTCTTCCAGTGTGAATCAGTTAATATTCTCGGG...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615577.4
CDS-3UTR CCA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCTTGTGTGAAGTCTCTTaGGGTTTAGAAGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: EVKIITLQTYGRASYKHFLCEVS*GLEDLA
Trigger: TGCAAGATCTTCTAAACCCCAAGAGACTTCACACAA...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS CCA 90 bp TGGGCCAGTTTCTTCCCTTCCATGGCATTGACGCAGGAGGCCCTGTaGGGCCCCATCTCCCGCTGGTCAGTCTGGGTGGCCACCACCAGC +
Preference number: 5 (lower is better)
Translates to: WASFFPSMALTQEAL*GPISRWSVWVATTS
Trigger: GCTGGTGGTGGCCACCCAGACTGACCAGCGGGAGATGGGGCCCCACAGGGCCTCCTGCGTCAATGCCATGGAAGGGAAGAAACTGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000381799.10
ENST00000505618.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCCTTCTGAAGGCGTCATaGCCGGCTGTGTCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALLLKAS*PAVSQR
Trigger: CCTCTGGGACACAGCCGGCAATGACGCCTTCAGAAG...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGCTTCTGAAGGCGTCATaGCCGGCTGTGTCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPLLKAS*PAVSQR
Trigger: CCTCTGGGACACAGCCGGCAATGACGCCTTCAGAAG...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGCGTCTCCTGGCCTGGTaGACGGCAGTTCGGACGGCG +
Preference number: 5 (lower is better)
Translates to: SSGQASSITVSKRRRCLGRLLAW*TAVRTA
Trigger: CGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGACG...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AATCCTCCCACCAGAGATCAAGACCCCGGTCCCAGGCCTTTTACTGGCTGTGGATGCAGTGGCGCGATCTaGGCTTACTGCAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: NPPTRDQDPGPRPFTGCGCSGAI*AYCNLR
Trigger: GCGGAGGTTGCAGTAAGCCAAGATCGCGCCACTGCA...TCCACAGCCAGTAAAAGGCCTGGGACCGGGGTCTTGATCTCTGGTGGGAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp AGAACTTTGAGACCCCTGTCTTTCACAGGACCTGCAGTCGCCTGGGAACCACCCACGGAGCTGTTAAGCTaGGCTCCCGCCAACAGGTGG +
Preference number: 5 (lower is better)
Translates to: RTLRPLSFTGPAVAWEPPTELLS*APANRW
Trigger: CCACCTGTTGGCGGGAGCCAAGCTTAACAGCTCCGT...GGGTGGTTCCCAGGCGACTGCAGGTCCTGTGAAAGACAGGGGTCTCAAAGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGTGCTGTACTCCCCGATaGCTAAGGGCTGAGCACTCC +
Preference number: 5 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPCCTPR*LRAEHS
Trigger: GGAGTGCTCAGCCCTTAGCAATCGGGGAGTACAGCA...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp CACGCCCTGCCCAACCCAGCCTTTGCAATTTCTACCTTAAGTTATGTAGTCCTCCGTCTCCTGGCCTGGTaGACGGCAGTTCGGACGGCG +
Preference number: 5 (lower is better)
Translates to: HALPNPAFAISTLSYVVLRLLAW*TAVRTA
Trigger: CGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGACG...GAGGACTACATAACTTAAGGTAGAAATTGCAAAGGCTGGGTTGGGCAGGGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGCGTCTCCTGGCCTGGTaGACGGCAGTTCGGACGGCG +
Preference number: 5 (lower is better)
Translates to: SLINNCIQKETLLGVYPERLLAW*TAVRTA
Trigger: CGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGACG...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTCGTCTCCTGGCCTGGTaGACGGCAGTTCGGACGGCG +
Preference number: 5 (lower is better)
Translates to: SGQASSITVSKRRRCLGCRLLAW*TAVRTA
Trigger: CGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGACG...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCCTGAAAATACAACAGTaGGGCTGGCAGGGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALLKIQQ*GWQGVH
Trigger: GTGGACTCCCTGCCAGCCCAACTGTTGTATTTTCAG...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCCCCACCAACACGCACTaGATGGAACTCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALPTNTH*MELSIF
Trigger: GAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGGG...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGCGTCTCCTGGCCTGGTaGACGGCAGTTCGGACGGCG +
Preference number: 5 (lower is better)
Translates to: TSSGQASSITVSKRRRCLRLLAW*TAVRTA
Trigger: CGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGACG...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGAGCCATGTTGGAAACTaGGCCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPSHVGN*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGTTTCCAACATGGCT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS GCA 90 bp TCGCCCACCAACACGCACTTGATGGAACTCAGCATCTTCCCAGCCTaGTGTCCTACTCTGAAGTCCAGAATCCCAGGGAAAAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: SPTNTHLMELSIFPA*CPTLKSRIPGKRAL
Trigger: GAGGGCTCTTTTCCCTGGGATTCTGGACTTCAGAGTAGGACAGCAGGCTGGGAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000381799.10
ENST00000503941.5
ENST00000505618.5
ENST00000507851.5
ENST00000508513.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCACCTCTGACGGCGATTaGCAGAATGTTACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALTSDGD*QNVTSP
Trigger: GGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGGT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGCCCACCAACACGCACTaGATGGAACTCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPPTNTH*MELSIF
Trigger: GAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGGG...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp CTTCACTTAGGATCATGTATGGTGGCCCTTCCCACTTTCAGATACCCACCCCCACTTCTGAAGGCGTCATaGCCGGCTGTGTCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: LHLGSCMVALPTFRYPPPLLKAS*PAVSQR
Trigger: CCTCTGGGACACAGCCGGCAATGACGCCTTCAGAAG...TGGGGGTGGGTATCTGAAAGTGGGAAGGGCCACCATACATGATCCTAAGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTCGTCTCCTGGCCTGGTaGACGGCAGTTCGGACGGCG +
Preference number: 5 (lower is better)
Translates to: NIQWPSLINNCIQKETLLRLLAW*TAVRTA
Trigger: CGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGACG...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCAAAAGGAGACGCTGCTaGGGGTGTACCCAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALKRRRC*GCTQRK
Trigger: TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGGTACAGTCCAGCGTaGGGCTTCCTCCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: SSGQASSITVSKRRRCLGWYSPA*GFLLLL
Trigger: CAGGAGCAGGAGGAAGCCCAACGCTGGACTGTACCA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617441.4
CDS TCA 90 bp AGCAAGGGGAATGCAAGCCAGGTAGGTCTGTGTCCTCAGGACCTCTaGCGGCGATTTGCAGAATGTTACTTCTCCCTGCCCATCCAAGCA +
Preference number: 5 (lower is better)
Translates to: SKGNASQVGLCPQDL*RRFAECYFSLPIQA
Trigger: TGCTTGGATGGGCAGGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGGTCCTGAGGACACAGACCTACCTGGCTTGCATTCCCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000381799.10
ENST00000503941.5
ENST00000505618.5
ENST00000507851.5
ENST00000508513.5
ENST00000511121.5
ENST00000515718.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS GCA 90 bp TGCAAGCCAGGTAGGTCTGTGTCCTCAGGACCTCTGACGGCGATTTaGAGAATGTTACTTCTCCCTGCCCATCCAAGCACCGTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: CKPGRSVSSGPLTAI*RMLLLPAHPSTVCF
Trigger: AAAGCAGACGGTGCTTGGATGGGCAGGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGGTCCTGAGGACACAGACCTACCTGGCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000381799.10
ENST00000503941.5
ENST00000505618.5
ENST00000507851.5
ENST00000508513.5
ENST00000511121.5
ENST00000515718.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS CCA 90 bp AAACCACCAGCTCATCTGCAGACTCTCAGTAGCAGAACAACCACGTaGCCAAGGAGGCTGAGAGGCCTAGAGGTGAGTGTCCTTTGGACT +
Preference number: 5 (lower is better)
Translates to: KPPAHLQTLSSRTTT*PRRLRGLEVSVLWT
Trigger: AGTCCAAAGGACACTCACCTCTAGGCCTCTCAGCCTCCTTGGCCACGTGGTTGTTCTGCTACTGAGAGTCTGCAGATGAGCTGGTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515503.5
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGACCTCTGACGGCGATTaGCAGAATGTTACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPTSDGD*QNVTSP
Trigger: GGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGGT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTCTTCTGAAGGCGTCATaGCCGGCTGTGTCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: SGQASSITVSKRRRCLGCLLKAS*PAVSQR
Trigger: CCTCTGGGACACAGCCGGCAATGACGCCTTCAGAAG...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGAACTTTGAGACCCCTGTCTTTCACAGGACCTGCAGTCGCCTGGGAACCACCCGGGGTACAGGGCAAGTaGCTCCTAATTTCACCAATC +
Preference number: 5 (lower is better)
Translates to: RTLRPLSFTGPAVAWEPPGVQGK*LLISPI
Trigger: GATTGGTGAAATTAGGAGCAACTTGCCCTGTACCCC...GGGTGGTTCCCAGGCGACTGCAGGTCCTGTGAAAGACAGGGGTCTCAAAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGCTGTACTCCCCGATaGCTAAGGGCTGAGCACTCC +
Preference number: 5 (lower is better)
Translates to: SSGQASSITVSKRRRCLGCCTPR*LRAEHS
Trigger: GGAGTGCTCAGCCCTTAGCAATCGGGGAGTACAGCA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGAAAAGGAGACGCTGCTaGGGGTGTACCCAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPKRRRC*GCTQRK
Trigger: TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp CCTGGGGACACTGAGGAGACCAGGAGGCAGTGCTACCTTCAAGAACAGCAGTCTCTGTTCCAAGTTCTGTaGCCATTGCTTGGAGCAGTC +
Preference number: 5 (lower is better)
Translates to: PGDTEETRRQCYLQEQQSLFQVL*PLLGAV
Trigger: GACTGCTCCAAGCAATGGCAACAGAACTTGGAACAG...AGACTGCTGTTCTTGAAGGTAGCACTGCCTCCTGGTCTCCTCAGTGTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGGCTCAGGGTCCAGCCTaGCCCACTCAGAAATCCAAG +
Preference number: 5 (lower is better)
Translates to: SSGQASSITVSKRRRCLGAQGPA*PTQKSK
Trigger: CTTGGATTTCTGAGTGGGCAAGGCTGGACCCTGAGC...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613272.4
ENST00000615577.4
CDS-3UTR CAA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCATGGATCTAGCCATGTaGGAAACTTGGCCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALMDLAM*ETWPPK
Trigger: TTTGGGAGGCCAAGTTTCCAACATGGCTAGATCCAT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS CCA 90 bp GGAGAAGTTTCCAAACAGCTCTCTGTCGGCTTCTACTCCAAGAAGTaGCAAAGGCCCCGAGAGCGTTCTCCACGGCTTCAGTTTCTGATG +
Preference number: 5 (lower is better)
Translates to: GEVSKQLSVGFYSKK*QRPRERSPRLQFLM
Trigger: CATCAGAAACTGAAGCCGTGGAGAACGCTCTCGGGGCCTTTGCCACTTCTTGGAGTAGAAGCCGACAGAGAGCTGTTTGGAAACTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000381799.10
ENST00000503754.5
ENST00000503941.5
ENST00000503978.1
ENST00000504638.1
ENST00000505618.5
ENST00000507851.5
ENST00000508513.5
ENST00000511121.5
ENST00000511967.5
ENST00000513894.5
ENST00000515503.5
ENST00000515718.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGTGCTGTACTCCCCGATaGCTAAGGGCTGAGCACTCC +
Preference number: 5 (lower is better)
Translates to: SLINNCIQKETLLGVYPECCTPR*LRAEHS
Trigger: GGAGTGCTCAGCCCTTAGCAATCGGGGAGTACAGCA...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCAAGATCTTGCACTCATaGATGGAGAAGAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALKILHS*MEKSLL
Trigger: AAGGAGGCTCTTCTCCATCAATGAGTGCAAGATCTT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTGCTCAGGGTCCAGCCTaGCCCACTCAGAAATCCAAG +
Preference number: 5 (lower is better)
Translates to: SGQASSITVSKRRRCLGCAQGPA*PTQKSK
Trigger: CTTGGATTTCTGAGTGGGCAAGGCTGGACCCTGAGC...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613272.4
ENST00000615577.4
CDS-3UTR CAA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGAGAGGTGAGTGTCCTTaGGACTCGATGAAATCCTTC +
Preference number: 5 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPRGECP*DSMKSF
Trigger: GAAGGATTTCATCGAGTCCAAAGGACACTCACCTCT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622175.4
CDS-3UTR CAA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCGTGTTCACTTTCCTGTaGCAGAATGCCGAAGAAATG +
Preference number: 5 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALVFTFL*QNAEEM
Trigger: CATTTCTTCGGCATTCTGCAACAGGAAAGTGAACAC...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610353.4
CDS TCA 90 bp CCAAGGAGGCTGAGAGGCCTAGAGGTGAGTGTCCTTTGGACTCGATaGAATCCTTCCGTTCTCCAAAGCATCCTCGTGCTGTTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: PRRLRGLEVSVLWTR*NPSVLQSILVLLQN
Trigger: ATTCTGCAACAGCACGAGGATGCTTTGGAGAACGGAAGGATTTCATCGAGTCCAAAGGACACTCACCTCTAGGCCTCTCAGCCTCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515503.5
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGCCATGTTGGAAACTGTaGCAGAATGCCGAAGAAATG +
Preference number: 5 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPPCWKL*QNAEEM
Trigger: CATTTCTTCGGCATTCTGCAACAGTTTCCAACATGG...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381799.10
ENST00000614836.1
CDS-3UTR CAA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGCCCACCAACACGCACTaGATGGAACTCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: SSGQASSITVSKRRRCLGPTNTH*MELSIF
Trigger: GAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGGG...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTCTTCTGAAGGCGTCATaGCCGGCTGTGTCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: NIQWPSLINNCIQKETLLLLKAS*PAVSQR
Trigger: CCTCTGGGACACAGCCGGCAATGACGCCTTCAGAAG...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTGCTGTACTCCCCGATaGCTAAGGGCTGAGCACTCC +
Preference number: 5 (lower is better)
Translates to: TSSGQASSITVSKRRRCLCCTPR*LRAEHS
Trigger: GGAGTGCTCAGCCCTTAGCAATCGGGGAGTACAGCA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAACGTCTCCTGGCCTGGTaGACGGCAGTTCGGACGGCG +
Preference number: 5 (lower is better)
Translates to: SVVSENIQWPSLINNCIQRLLAW*TAVRTA
Trigger: CGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGACG...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGATATATCTTCCATCCTaGGAGCAGCCCTTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPIYLPS*EQPFLL
Trigger: CAAGAGAAAGGGCTGCTCCAAGGATGGAAGATATAT...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619474.4
CDS-3UTR CAA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGACCTCTGACGGCGATTaGCAGAATGTTACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: SSGQASSITVSKRRRCLGTSDGD*QNVTSP
Trigger: GGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGGT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGCCCACCAACACGCACTaGATGGAACTCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: SLINNCIQKETLLGVYPEPTNTH*MELSIF
Trigger: GAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGGG...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTCCCACCAACACGCACTaGATGGAACTCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: SGQASSITVSKRRRCLGCPTNTH*MELSIF
Trigger: GAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGGG...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAACTTCTGAAGGCGTCATaGCCGGCTGTGTCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKLLKAS*PAVSQR
Trigger: CCTCTGGGACACAGCCGGCAATGACGCCTTCAGAAG...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGGGGGTACAGGGCAAGTaGCTCCTAATTTCACCAATC +
Preference number: 5 (lower is better)
Translates to: SSGQASSITVSKRRRCLGGVQGK*LLISPI
Trigger: GATTGGTGAAATTAGGAGCAACTTGCCCTGTACCCC...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
51% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAAAAGGAGACGCTGCTaGGGGTGTACCCAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: SSGQASSITVSKRRRCLGKRRRC*GCTQRK
Trigger: TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp CTTAGAGGTGAGTACAAGCCACCGCCTGGAGAGCAGAGAAGTCTGAGTGAAGGCTTCTGTTGCCATTGCTaGGAGCAGTCTGATTCTCTA +
Preference number: 5 (lower is better)
Translates to: LRGEYKPPPGEQRSLSEGFCCHC*EQSDSL
Trigger: TAGAGAATCAGACTGCTCCAAGCAATGGCAACAGAA...GCCTTCACTCAGACTTCTCTGCTCTCCAGGCGGTGGCTTGTACTCACCTCTAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTATGGATCTAGCCATGTaGGAAACTGGCTGCGAGACC +
Preference number: 5 (lower is better)
Translates to: SGQASSITVSKRRRCLGCMDLAM*ETGCET
Trigger: GGTCTCGCAGCCAGTTTCCAACATGGCTAGATCCAT...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617441.4
CDS-3UTR CAA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGATGGATCTAGCCATGTaGGAAAGGTTTCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: SLINNCIQKETLLGVYPEMDLAM*ERFLGP
Trigger: GGGCCCCAGAAACCTTTCCAACATGGCTAGATCCAT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615083.4
CDS GCA 90 bp AGAGCAGTATCTTTGGGTCAAGGGCCCGAGCTCCTAGGGAATGACTaGAAAGCACAGGACATGCACAGTGATGTAGAAATTCATCAGCGT +
Preference number: 5 (lower is better)
Translates to: RAVSLGQGPELLGND*KAQDMHSDVEIHQR
Trigger: ACGCTGATGAATTTCTACATCACTGTGCATGTCCTGTGCTTTGCAGTCATTCCCTAGGAGCTCGGGCCCTTGACCCAAAGATACTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505618.5
CDS GCA 90 bp AGCAGGAGCAATCCGAATGTGACAAAAGAGATTAGCAAGTTCCTGTaGCTAAGTCAATTTCCTGTAGCCGGCTTCTCCGCAGAGGGGGTT +
Preference number: 5 (lower is better)
Translates to: SRSNPNVTKEISKFL*LSQFPVAGFSAEGV
Trigger: AACCCCCTCTGCGGAGAAGCCGGCTACAGGAAATTGACTTAGGCACAGGAACTTGCTAATCTCTTTTGTCACATTCGGATTGCTCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS CCA 90 bp GTTCTCCAAAGCATCCTCGTGCTTTGCCGGACAAAAAGGCAGCCGTaGGTCATTATCACTCACTTGCCTCCCAAATGTTCATACCAAGGA +
Preference number: 5 (lower is better)
Translates to: VLQSILVLCRTKRQP*VIITHLPPKCSYQG
Trigger: TCCTTGGTATGAACATTTGGGAGGCAAGTGAGTGATAATGACCCACGGCTGCCTTTTTGTCCGGCAAAGCACGAGGATGCTTTGGAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514839.1
CDS-3UTR CAA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGCTGAAAATACAACAGTaGGGCTGGCAGGGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: TSSGQASSITVSKRRRCLLKIQQ*GWQGVH
Trigger: GTGGACTCCCTGCCAGCCCAACTGTTGTATTTTCAG...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCTCTGACGGCGATTaGCAGAATGTTACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: SGQASSITVSKRRRCLGCTSDGD*QNVTSP
Trigger: GGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGGT...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCATTTCACCAATCCACTaGTTCTTCAAGTTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALISPIH*FFKFRN
Trigger: ATTCCTGAACTTGAAGAACAAGTGGATTGGTGAAAT...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAATGCTGTACTCCCCGATaGCTAAGGGCTGAGCACTCC +
Preference number: 5 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKCCTPR*LRAEHS
Trigger: GGAGTGCTCAGCCCTTAGCAATCGGGGAGTACAGCA...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCCGTCTCCTGGCCTGGTaGACGGCAGTTCGGACGGCG +
Preference number: 5 (lower is better)
Translates to: EVKIITLQTYGRASYKHFRLLAW*TAVRTA
Trigger: CGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGACG...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCGTGTTTCAATCAATCTaGGTGAATGAGAGGAGAATA +
Preference number: 5 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALVFQSI*VNERRI
Trigger: TATTCTCCTCTCATTCACCAAGATTGATTGAAACAC...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGCTGGTGAGGGTCTGCTaGCTTTCTATAACCACTGTG +
Preference number: 5 (lower is better)
Translates to: SLINNCIQKETLLGVYPELVRVC*LSITTV
Trigger: CACAGTGGTTATAGAAAGCAAGCAGACCCTCACCAG...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGATGGATCTAGCCATGTaGGAAACTGAGAGAGCTCTC +
Preference number: 5 (lower is better)
Translates to: SSGQASSITVSKRRRCLGMDLAM*ETERAL
Trigger: GAGAGCTCTCTCAGTTTCCAACATGGCTAGATCCAT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622175.4
CDS-3UTR CAA 90 bp CTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGCCCTCTTGAGGTTTGGTACTTaGTTGAAATGCAAATATCCC +
Preference number: 5 (lower is better)
Translates to: LLGVYPEKTPSFPGFPALLRFGT*LKCKYP
Trigger: GGGATATTTGCATTTCAACAAAGTACCAAACCTCAA...GAGGGCCGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619474.4
CDS TCA 90 bp TTGCAGAATGTTACTTCTCCCTGCCCATCCAAGCACCGTCTGCTTTaGAAACCTCCAAAGCCTAGTCTTCAACTCAGTAGCAACCTGGTG +
Preference number: 5 (lower is better)
Translates to: LQNVTSPCPSKHRLL*KPPKPSLQLSSNLV
Trigger: CACCAGGTTGCTACTGAGTTGAAGACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTTGGATGGGCAGGGAGAAGTAACATTCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614836.1
CDS GCA 90 bp GCGATTTGCAGAATGTTACTTCTCCCTGCCCATCCAAGCACCGTCTaGTTTGAAAACCTCCAAAGCCTAGTCTTCAACTGGTGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: AICRMLLLPAHPSTV*FENLQSLVFNWCVK
Trigger: CTTCACACACCAGTTGAAGACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTTGGATGGGCAGGGAGAAGTAACATTCTGCAAATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000381799.10
ENST00000503754.5
ENST00000503941.5
ENST00000505618.5
ENST00000507851.5
ENST00000508513.5
ENST00000511121.5
ENST00000515718.5
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS GCA 90 bp GCCACCATGTCCGGCCCAGTTCTTGATGTTTTAAAGGACATCTGTTaGTTCCTGATCTGGATGCTGGTTCCACAAGTGTGTGCAGTTTGT +
Preference number: 5 (lower is better)
Translates to: ATMSGPVLDVLKDIC*FLIWMLVPQVCAVC
Trigger: ACAAACTGCACACACTTGTGGAACCAGCATCCAGATCAGGAAGCAACAGATGTCCTTTAAAACATCAAGAACTGGGCCGGACATGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508513.5
ENST00000610353.4
ENST00000615577.4
CDS GCA 90 bp GCGATTTGCAGAATGTTACTTCTCCCTGCCCATCCAAGCACCGTCTaGTTTGAAAACCTCCAAAGCCTAGTCTTCAACTCAGTAGCAACC +
Preference number: 5 (lower is better)
Translates to: AICRMLLLPAHPSTV*FENLQSLVFNSVAT
Trigger: GGTTGCTACTGAGTTGAAGACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTTGGATGGGCAGGGAGAAGTAACATTCTGCAAATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614836.1
CDS CCA 90 bp TTTCACCAATCCACTTGTTCTTCAAGTTCAGGAATGAGTTATGGTTaGCCACAGAGTAGCACATCAGCACCACGTCTGCCTGCTGGTAGG +
Preference number: 5 (lower is better)
Translates to: FHQSTCSSSSGMSYG*PQSSTSAPRLPAGR
Trigger: CCTACCAGCAGGCAGACGTGGTGCTGATGTGCTACTCTGTGGCCAACCATAACTCATTCCTGAACTTGAAGAACAAGTGGATTGGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000381799.10
ENST00000503941.5
ENST00000505618.5
ENST00000507851.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAACTTCTGAAGGCGTCATaGCCGGCTGTGTCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: SVVSENIQWPSLINNCIQLLKAS*PAVSQR
Trigger: CCTCTGGGACACAGCCGGCAATGACGCCTTCAGAAG...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGGTACAGGGCAAGTaGCTCCTAATTTCACCAATC +
Preference number: 5 (lower is better)
Translates to: TSSGQASSITVSKRRRCLGVQGK*LLISPI
Trigger: GATTGGTGAAATTAGGAGCAACTTGCCCTGTACCCC...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGAAGATCTTGCACTCATaGATGGAGAAGAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SSGQASSITVSKRRRCLGKILHS*MEKSLL
Trigger: AAGGAGGCTCTTCTCCATCAATGAGTGCAAGATCTT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGGTGTTTCAATCAATCTaGGTGAATGAGAGGAGAATA +
Preference number: 5 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPVFQSI*VNERRI
Trigger: TATTCTCCTCTCATTCACCAAGATTGATTGAAACAC...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGACGCTGCTTGGGGTGTACCCAGAGAAAACACCAAGCTTTCCTGGCTTCCCGCTGTTCTCTGAGCAGTaGCTATATAGCTTTCTTATT +
Preference number: 5 (lower is better)
Translates to: ETLLGVYPEKTPSFPGFPLFSEQ*LYSFLI
Trigger: AATAAGAAAGCTATATAGCAACTGCTCAGAGAACAG...CGGGAAGCCAGGAAAGCTTGGTGTTTTCTCTGGGTACACCCCAAGCAGCGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTGAGAGTTCTGGATTCTaGGTTCCTAAATCCCCACCT +
Preference number: 5 (lower is better)
Translates to: SGQASSITVSKRRRCLGCESSGF*VPKSPP
Trigger: AGGTGGGGATTTAGGAACCAAGAATCCAGAACTCTC...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615083.4
CDS-3UTR CAA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGATGGATCTAGCCATGTaGGAAACAAATGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: SLINNCIQKETLLGVYPEMDLAM*ETNGPA
Trigger: TGCAGGGCCATTTGTTTCCAACATGGCTAGATCCAT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613272.4
CDS-3UTR CAA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTAGAGCTCTCGGAAGCTaGGAGAAACCACCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: NIQWPSLINNCIQKETLLRALGS*EKPPAH
Trigger: ATGAGCTGGTGGTTTCTCCAAGCTTCCGAGAGCTCT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622175.4
CDS TCA 90 bp TTGCAGAATGTTACTTCTCCCTGCCCATCCAAGCACCGTCTGCTTTaGAAACCTCCAAAGCCTAGTCTTCAACTGGTGTGTGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: LQNVTSPCPSKHRLL*KPPKPSLQLVCEGE
Trigger: TTCTCCTTCACACACCAGTTGAAGACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTTGGATGGGCAGGGAGAAGTAACATTCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000381799.10
ENST00000503754.5
ENST00000503941.5
ENST00000503978.1
ENST00000505618.5
ENST00000507851.5
ENST00000508513.5
ENST00000511121.5
ENST00000515718.5
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS CCA 90 bp TTCTCATCCAGTGTCAATCCACTGTATGACCGTGACATGAGAATGTaGCCTCATCTTACCACTTCCAGTAGGGTTGGCTGTTGCAGAATG +
Preference number: 5 (lower is better)
Translates to: FSSSVNPLYDRDMRM*PHLTTSSRVGCCRM
Trigger: CATTCTGCAACAGCCAACCCTACTGGAAGTGGTAAGATGAGGCCACATTCTCATGTCACGGTCATACAGTGGATTGACACTGGATGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514143.1
CDS-3UTR CAA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAACCCACCAACACGCACTaGATGGAACTCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKPTNTH*MELSIF
Trigger: GAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGGG...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTACAGGGCAAGTaGCTCCTAATTTCACCAATC +
Preference number: 5 (lower is better)
Translates to: NIQWPSLINNCIQKETLLGVQGK*LLISPI
Trigger: GATTGGTGAAATTAGGAGCAACTTGCCCTGTACCCC...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAATGCTGTACTCCCCGATaGCTAAGGGCTGAGCACTCC +
Preference number: 5 (lower is better)
Translates to: SVVSENIQWPSLINNCIQCCTPR*LRAEHS
Trigger: GGAGTGCTCAGCCCTTAGCAATCGGGGAGTACAGCA...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAGATCTTGCACTCATaGATGGAGAAGAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SLINNCIQKETLLGVYPEKILHS*MEKSLL
Trigger: AAGGAGGCTCTTCTCCATCAATGAGTGCAAGATCTT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTAAAAGGAGACGCTGCTaGGGGTGTACCCAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: NIQWPSLINNCIQKETLLKRRRC*GCTQRK
Trigger: TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AAGGCTGGTGAGGGTCTGCTTGCTTTCTATAACCACTGTGTGGCACAGAAGCCCGAAATTAACAGAACTTaGAGACCCCTGTCTTTCACA +
Preference number: 5 (lower is better)
Translates to: KAGEGLLAFYNHCVAQKPEINRT*RPLSFT
Trigger: TGTGAAAGACAGGGGTCTCAAAGTTCTGTTAATTTC...GGGCTTCTGTGCCACACAGTGGTTATAGAAAGCAAGCAGACCCTCACCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTTTCTGTGCCTGGAATaGCCAGTTTTAGATGATCTG +
Preference number: 5 (lower is better)
Translates to: SSGQASSITVSKRRRCLGFLCLE*PVLDDL
Trigger: CAGATCATCTAAAACTGGCAATTCCAGGCACAGAAA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617441.4
CDS-3UTR CAA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTAGCATCCTCGTGCTGTaGCAGAATGCCGAAGAAATG +
Preference number: 5 (lower is better)
Translates to: NIQWPSLINNCIQKETLLSILVL*QNAEEM
Trigger: CATTTCTTCGGCATTCTGCAACAGCACGAGGATGCT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622175.4
CDS-3UTR CAA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTTTAAAGGACATCTGTaGCTTCCTGATCTGGATGCT +
Preference number: 5 (lower is better)
Translates to: SSGQASSITVSKRRRCLGFKGHL*LPDLDA
Trigger: AGCATCCAGATCAGGAAGCAACAGATGTCCTTTAAA...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS TCA 90 bp GTTGCTCCTAATTTCACCAATCCACTTGTTCTTCAAGTTCAGGAATaGGTTATGGTTGGCCACAGAGTAGCACATCAGCACCACGTCTGC +
Preference number: 5 (lower is better)
Translates to: VAPNFTNPLVLQVQE*VMVGHRVAHQHHVC
Trigger: GCAGACGTGGTGCTGATGTGCTACTCTGTGGCCAACCATAACTCATTCCTGAACTTGAAGAACAAGTGGATTGGTGAAATTAGGAGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000381799.10
ENST00000505618.5
ENST00000507851.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS TCA 90 bp GTTTCTCTTTCTCATCCAGTGTCAATCCACTGTATGACCGTGACATaGGAATGTGGCCTCATCTTACCACTTCCAGTAGGGTTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: VSLSHPVSIHCMTVT*ECGLILPLPVGLAV
Trigger: AACAGCCAACCCTACTGGAAGTGGTAAGATGAGGCCACATTCTCATGTCACGGTCATACAGTGGATTGACACTGGATGAGAAAGAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514143.1
CDS GCA 90 bp TGCTTTGCCGGACAAAAAGGCAGCCGTGGGTCATTATCACTCACTTaGCTCCCAAATGTTCATACCAAGGACAGAAGTTTTGTACCTTGT +
Preference number: 5 (lower is better)
Translates to: CFAGQKGSRGSLSLT*LPNVHTKDRSFVPC
Trigger: ACAAGGTACAAAACTTCTGTCCTTGGTATGAACATTTGGGAGGCAAGTGAGTGATAATGACCCACGGCTGCCTTTTTGTCCGGCAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514839.1
CDS-3UTR CAA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAACCTCTGACGGCGATTaGCAGAATGTTACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKTSDGD*QNVTSP
Trigger: GGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGGT...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AAGGCTGGTGAGGGTCTGCTTGCTTTCTATAACCACTGTGTGGCACAGAAGCCCATTTCACCAATCCACTaGTTCTTCAAGTTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: KAGEGLLAFYNHCVAQKPISPIH*FFKFRN
Trigger: ATTCCTGAACTTGAAGAACAAGTGGATTGGTGAAAT...GGGCTTCTGTGCCACACAGTGGTTATAGAAAGCAAGCAGACCCTCACCAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAGGGGTACAGGGCAAGTaGCTCCTAATTTCACCAATC +
Preference number: 5 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKGVQGK*LLISPI
Trigger: GATTGGTGAAATTAGGAGCAACTTGCCCTGTACCCC...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS GCA 90 bp ACACACACACACACACACACACACACACACACACACACACACAAATaGCTCCCGGTCAAGAAGCAGAAGCTGACTTTATCTGTAAAATCA +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTHTHK*LPVKKQKLTLSVKS
Trigger: TGATTTTACAGATAAAGTCAGCTTCTGCTTCTTGACCGGGAGGCATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504638.1
CDS CCA 90 bp GGCCCAGTTCTTGATGTTTTAAAGGACATCTGTTGCTTCCTGATCTaGATGCTGGTTCCACAAGTGTGTGCAGTTTGTGAAAATCCACCA +
Preference number: 5 (lower is better)
Translates to: GPVLDVLKDICCFLI*MLVPQVCAVCENPP
Trigger: TGGTGGATTTTCACAAACTGCACACACTTGTGGAACCAGCATCCAGATCAGGAAGCAACAGATGTCCTTTAAAACATCAAGAACTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508513.5
ENST00000610353.4
ENST00000615577.4
CDS CCA 90 bp CAAGTGTGTGCAGTTTGTGAAAATCCACCAAGCTGTATACCCACGTaGTGTTCACTTTCCTGTTGCAGAATGCCGAAGAAATGTCTTGAC +
Preference number: 5 (lower is better)
Translates to: QVCAVCENPPSCIPT*CSLSCCRMPKKCLD
Trigger: GTCAAGACATTTCTTCGGCATTCTGCAACAGGAAAGTGAACACCACGTGGGTATACAGCTTGGTGGATTTTCACAAACTGCACACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610353.4
CDS-3UTR CAA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTCCATGTTGGAAACTGTaGCAGAATGCCGAAGAAATG +
Preference number: 5 (lower is better)
Translates to: NIQWPSLINNCIQKETLLPCWKL*QNAEEM
Trigger: CATTTCTTCGGCATTCTGCAACAGTTTCCAACATGG...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381799.10
ENST00000614836.1
CDS-3UTR CAA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTATGGATCTAGCCATGTaGGAAACTGTTGCAGAATGC +
Preference number: 5 (lower is better)
Translates to: NIQWPSLINNCIQKETLLMDLAM*ETVAEC
Trigger: GCATTCTGCAACAGTTTCCAACATGGCTAGATCCAT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381799.10
ENST00000614836.1
CDS-3UTR CAA 90 bp TCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGATTTCACCAATCCACTaGTTCTTCAAGTTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: SSGQASSITVSKRRRCLGISPIH*FFKFRN
Trigger: ATTCCTGAACTTGAAGAACAAGTGGATTGGTGAAAT...CCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGATGCAAATATCCCTGTaGCAGAATGCCGAAGAAATG +
Preference number: 5 (lower is better)
Translates to: TSSGQASSITVSKRRRCLMQISL*QNAEEM
Trigger: CATTTCTTCGGCATTCTGCAACAGGGATATTTGCAT...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619474.4
CDS-3UTR CAA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGTTTAAAGGACATCTGTaGCTTCCTGATCTGGATGCT +
Preference number: 5 (lower is better)
Translates to: TSSGQASSITVSKRRRCLFKGHL*LPDLDA
Trigger: AGCATCCAGATCAGGAAGCAACAGATGTCCTTTAAA...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS TCA 90 bp TTTCCTCATAGGATCAACCTCTCCCTCGTTCCCGAGAATATTAACTaGTTCACACTGGAAGAACTGAAAATACAACAGTTGGGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: FPHRINLSLVPENIN*FTLEELKIQQLGWQ
Trigger: CTGCCAGCCCAACTGTTGTATTTTCAGTTCTTCCAGTGTGAATCAGTTAATATTCTCGGGAACGAGGGAGAGGTTGATCCTATGAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000381799.10
ENST00000513894.5
ENST00000514143.1
ENST00000514839.1
ENST00000515503.5
ENST00000515702.1
ENST00000515718.5
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAATGGATCTAGCCATGTaGGAAACTGTTGCAGAATGC +
Preference number: 5 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKMDLAM*ETVAEC
Trigger: GCATTCTGCAACAGTTTCCAACATGGCTAGATCCAT...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381799.10
ENST00000614836.1
CDS-3UTR CAA 90 bp AGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGATTTCACCAATCCACTaGTTCTTCAAGTTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: SLINNCIQKETLLGVYPEISPIH*FFKFRN
Trigger: ATTCCTGAACTTGAAGAACAAGTGGATTGGTGAAAT...CTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAGGGGTACAGGGCAAGTaGCTCCTAATTTCACCAATC +
Preference number: 5 (lower is better)
Translates to: SVVSENIQWPSLINNCIQGVQGK*LLISPI
Trigger: GATTGGTGAAATTAGGAGCAACTTGCCCTGTACCCC...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAAAGATCTTGCACTCATaGATGGAGAAGAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKKILHS*MEKSLL
Trigger: AAGGAGGCTCTTCTCCATCAATGAGTGCAAGATCTT...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAAAGGAGACGCTGCTaGGGGTGTACCCAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: SVVSENIQWPSLINNCIQKRRRC*GCTQRK
Trigger: TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTT...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTGTGTTTCAATCAATCTaGGTGAATGAGAGGAGAATA +
Preference number: 5 (lower is better)
Translates to: SGQASSITVSKRRRCLGCVFQSI*VNERRI
Trigger: TATTCTCCTCTCATTCACCAAGATTGATTGAAACAC...ACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCAGCCATGTTGGAAACTaGGCCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: EVKIITLQTYGRASYKHFSHVGN*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGTTTCCAACATGGCT...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS-3UTR CAA 90 bp ATTTTGAAGTATAAGAAACCTGTGTCTGCATCTAGGCAGGCAAAAGTAAGTATGCTGAAAATACAACAGTaGGGCTGGCAGGGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: ILKYKKPVSASRQAKVSMLKIQQ*GWQGVH
Trigger: GTGGACTCCCTGCCAGCCCAACTGTTGTATTTTCAG...CATACTTACTTTTGCCTGCCTAGATGCAGACACAGGTTTCTTATACTTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCCCCACCAACACGCACTaGATGGAACTCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: EVKIITLQTYGRASYKHFPTNTH*MELSIF
Trigger: GAAGATGCTGAGTTCCATCAAGTGCGTGTTGGTGGG...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp ACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGTGTTTCAATCAATCTaGGTGAATGAGAGGAGAATA +
Preference number: 5 (lower is better)
Translates to: TSSGQASSITVSKRRRCLVFQSI*VNERRI
Trigger: TATTCTCCTCTCATTCACCAAGATTGATTGAAACAC...CAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAATGGATCTAGCCATGTaGGAAACTTGGCCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: SVVSENIQWPSLINNCIQMDLAM*ETWPPK
Trigger: TTTGGGAGGCCAAGTTTCCAACATGGCTAGATCCAT...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610353.4
ENST00000615577.4
CDS TCA 90 bp TTTCCTCATAGGATCAACCTCTCCCTCGTTCCCGAGAATATTAACTaGTTCACACTGGAAGAACTGAAAATACAACAGTTGGGCAAATGG +
Preference number: 5 (lower is better)
Translates to: FPHRINLSLVPENIN*FTLEELKIQQLGKW
Trigger: CCATTTGCCCAACTGTTGTATTTTCAGTTCTTCCAGTGTGAATCAGTTAATATTCTCGGGAACGAGGGAGAGGTTGATCCTATGAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503754.5
CDS GCA 90 bp TTAGTCAATTTCACATTCTTTTTCTCCGGAGGGATGAAGATGAAGTaGGTTTCTCTTTCTCATCCAGTGTCAATCCACTGTATGACCGTG +
Preference number: 5 (lower is better)
Translates to: LVNFTFFFSGGMKMK*VSLSHPVSIHCMTV
Trigger: CACGGTCATACAGTGGATTGACACTGGATGAGAAAGAGAAACGCACTTCATCTTCATCCCTCCGGAGAAAAAGAATGTGAAATTGACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514143.1
CDS-3UTR CAA 90 bp ATTTTGAAGTATAAGAAACCTGTGTCTGCATCTAGGCAGGCAAAAGTAAGTATGACCTCTGACGGCGATTaGCAGAATGTTACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: ILKYKKPVSASRQAKVSMTSDGD*QNVTSP
Trigger: GGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGGT...CATACTTACTTTTGCCTGCCTAGATGCAGACACAGGTTTCTTATACTTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp AACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGGAGACGCTGCTTATTTCACCAATCCACTaGTTCTTCAAGTTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: NIQWPSLINNCIQKETLLISPIH*FFKFRN
Trigger: ATTCCTGAACTTGAAGAACAAGTGGATTGGTGAAAT...AAGCAGCGTCTCCTTTTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCGGGGTACAGGGCAAGTaGCTCCTAATTTCACCAATC +
Preference number: 5 (lower is better)
Translates to: EVKIITLQTYGRASYKHFGVQGK*LLISPI
Trigger: GATTGGTGAAATTAGGAGCAACTTGCCCTGTACCCC...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp AGTGTAGTTAGTGAAAACATCCAGTGGCCAAGCCTCATCAATAACTGTATCCAAAAGATCTTGCACTCATaGATGGAGAAGAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SVVSENIQWPSLINNCIQKILHS*MEKSLL
Trigger: AAGGAGGCTCTTCTCCATCAATGAGTGCAAGATCTT...TTGGATACAGTTATTGATGAGGCTTGGCCACTGGATGTTTTCACTAACTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCATGGATCTAGCCATGTaGGAAACAGAAGGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: EVKIITLQTYGRASYKHFMDLAM*ETEGPC
Trigger: GCAGGGACCTTCTGTTTCCAACATGGCTAGATCCAT...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619474.4
CDS TCA 90 bp GGGTTGGCTGTTGCAGAATGCCGAAGAAATGTCTTGACAGTAAAATaGCTGACTCCGGAAATCAAATTTGTTCAACAAAAGCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: GLAVAECRRNVLTVK*LTPEIKFVQQKQVK
Trigger: TTTCACCTGCTTTTGTTGAACAAATTTGATTTCCGGAGTCAGTCATTTTACTGTCAAGACATTTCTTCGGCATTCTGCAACAGCCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514143.1
CDS TCA 90 bp CCTCGTGCTGTTGCAGAATGCCGAAGAAATGTCTTGACAGTAAAATaGCTGACTCCGGAAATCAAATTTGTTCAACAAAAGCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: PRAVAECRRNVLTVK*LTPEIKFVQQKQVK
Trigger: TTTCACCTGCTTTTGTTGAACAAATTTGATTTCCGGAGTCAGTCATTTTACTGTCAAGACATTTCTTCGGCATTCTGCAACAGCACGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515503.5
ENST00000622175.4
CDS-3UTR CAA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAATTTCACCAATCCACTaGTTCTTCAAGTTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKISPIH*FFKFRN
Trigger: ATTCCTGAACTTGAAGAACAAGTGGATTGGTGAAAT...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp TCATCAATAACTGTATCCAAAAGGAGACGCTGCTTGGGGTGTACCCAGAGAAAAGTGTTTCAATCAATCTaGGTGAATGAGAGGAGAATA +
Preference number: 5 (lower is better)
Translates to: SSITVSKRRRCLGCTQRKVFQSI*VNERRI
Trigger: TATTCTCCTCTCATTCACCAAGATTGATTGAAACAC...TTTTCTCTGGGTACACCCCAAGCAGCGTCTCCTTTTGGATACAGTTATTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS-3UTR CAA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCCTAAATCCCCACCTGTaGCAGAATGCCGAAGAAATG +
Preference number: 5 (lower is better)
Translates to: EVKIITLQTYGRASYKHFLNPHL*QNAEEM
Trigger: CATTTCTTCGGCATTCTGCAACAGGTGGGGATTTAG...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615083.4
CDS TCA 90 bp CACTTTCCTGTTGCAGAATGCCGAAGAAATGTCTTGACAGTAAAATaGCTGACTCCGGAAATCAAATTTGTTCAACAAAAGCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: HFPVAECRRNVLTVK*LTPEIKFVQQKQVK
Trigger: TTTCACCTGCTTTTGTTGAACAAATTTGATTTCCGGAGTCAGTCATTTTACTGTCAAGACATTTCTTCGGCATTCTGCAACAGGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610353.4
CDS TCA 90 bp TTGGAAACTGTTGCAGAATGCCGAAGAAATGTCTTGACAGTAAAATaGCTGACTCCGGAAATCAAATTTGTTCAACAAAAGCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: LETVAECRRNVLTVK*LTPEIKFVQQKQVK
Trigger: TTTCACCTGCTTTTGTTGAACAAATTTGATTTCCGGAGTCAGTCATTTTACTGTCAAGACATTTCTTCGGCATTCTGCAACAGTTTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381799.10
ENST00000503754.5
ENST00000511967.5
ENST00000614836.1
CDS TCA 90 bp AATATCCCTGTTGCAGAATGCCGAAGAAATGTCTTGACAGTAAAATaGCTGACTCCGGAAATCAAATTTGTTCAACAAAAGCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: NIPVAECRRNVLTVK*LTPEIKFVQQKQVK
Trigger: TTTCACCTGCTTTTGTTGAACAAATTTGATTTCCGGAGTCAGTCATTTTACTGTCAAGACATTTCTTCGGCATTCTGCAACAGGGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000513894.5
ENST00000514839.1
ENST00000619474.4
CDS-3UTR CAA 90 bp TTCTACCTTAAGTTATGTAGTCCTCTGTTCTCCACTTTAACAGATGAGCAACACGTGTTTCAATCAATCTaGGTGAATGAGAGGAGAATA +
Preference number: 5 (lower is better)
Translates to: FYLKLCSPLFSTLTDEQHVFQSI*VNERRI
Trigger: TATTCTCCTCTCATTCACCAAGATTGATTGAAACAC...GTGTTGCTCATCTGTTAAAGTGGAGAACAGAGGACTACATAACTTAAGGTAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381799.10
CDS-3UTR CAA 90 bp GAGGTGAAAATAATAACACTACAAACATATGGCAGAGCTTCGTACAAGCATTTCGTGTTTCAATCAATCTaGGTGAATGAGAGGAGAATA +
Preference number: 5 (lower is better)
Translates to: EVKIITLQTYGRASYKHFVFQSI*VNERRI
Trigger: TATTCTCCTCTCATTCACCAAGATTGATTGAAACAC...GAAATGCTTGTACGAAGCTCTGCCATATGTTTGTAGTGTTATTATTTTCACCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS TCA 72 bp CGTCTGCCTGCTGGTAGGACAGGGGCCGGATGCTTCTaGAGGCGTCATTGCCGGCTGTGTCCCAGAGGCCCA +
Preference number: 6 (lower is better)
Translates to: RLPAGRTGAGCF*RRHCRLCPRGP
Trigger: TGGGCCTCTGGGACACAGCCGGCAATGACGCCTTCAGAAGCATCCGGCCCCTGTCCTACCAGCAGGCAGACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000381799.10
ENST00000503941.5
ENST00000505618.5
ENST00000507851.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS CCA 72 bp TTCTTCCCTTCCATGGCATTGACGCAGGAGGCCCTGTaGGGCCCCATCTCCCGCTGGTCAGTCTGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: FFPSMALTQEAL*GPISRWSVWVA
Trigger: GGCCACCCAGACTGACCAGCGGGAGATGGGGCCCCACAGGGCCTCCTGCGTCAATGCCATGGAAGGGAAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000381799.10
ENST00000505618.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS GCA 72 bp CCAGAATCCCAGGGAAAAGAGCCCTCAGTGGGCAGCTaGAGCACACGCCATTCAGCAAGGGGAATGCAAGCC +
Preference number: 6 (lower is better)
Translates to: PESQGKEPSVGS*STRHSARGMQA
Trigger: GGCTTGCATTCCCCTTGCTGAATGGCGTGTGCTGCAGCTGCCCACTGAGGGCTCTTTTCCCTGGGATTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000381799.10
ENST00000503941.5
ENST00000505618.5
ENST00000507851.5
ENST00000508513.5
ENST00000511121.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS GCA 72 bp TGGTTGACGGCAGTTCGGACGGCGCACTCAAACACCTaGTGTACTCCCCGATTGCTAAGGGCTGAGCACTCC +
Preference number: 6 (lower is better)
Translates to: WLTAVRTAHSNT*CTPRLLRAEHS
Trigger: GGAGTGCTCAGCCCTTAGCAATCGGGGAGTACAGCAGGTGTTTGAGTGCGCCGTCCGAACTGCCGTCAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000381799.10
ENST00000505618.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS CCA 72 bp ACAGTTGGGCTGGCAGGGAGTCCACCCCAAGATGGTTaGGTTAGTGTGTGTGGGGCAGCAGGAGCAATCCGA +
Preference number: 6 (lower is better)
Translates to: TVGLAGSPPQDG*VSVCGAAGAIR
Trigger: TCGGATTGCTCCTGCTGCCCCACACACACTAACCCAACCATCTTGGGGTGGACTCCCTGCCAGCCCAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000381799.10
ENST00000513894.5
ENST00000514839.1
ENST00000515702.1
ENST00000515718.5
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS CCA 72 bp ATGGAGAAGAGCCTCCTTCTGTTTCGTCTCCTGGCCTaGTTGACGGCAGTTCGGACGGCGCACTCAAACACC +
Preference number: 6 (lower is better)
Translates to: MEKSLLLFRLLA*LTAVRTAHSNT
Trigger: GGTGTTTGAGTGCGCCGTCCGAACTGCCGTCAACCAGGCCAGGAGACGAAACAGAAGGAGGCTCTTCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000381799.10
ENST00000505618.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS CCA 72 bp TCCAAACAGCTCTCTGTCGGCTTCTACTCCAAGAAGTaGCAAAGGCCCCGAGAGCGTTCTCCACGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: SKQLSVGFYSKK*QRPRERSPRLQ
Trigger: CTGAAGCCGTGGAGAACGCTCTCGGGGCCTTTGCCACTTCTTGGAGTAGAAGCCGACAGAGAGCTGTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000381799.10
ENST00000503754.5
ENST00000503941.5
ENST00000503978.1
ENST00000504638.1
ENST00000505618.5
ENST00000507851.5
ENST00000508513.5
ENST00000511121.5
ENST00000511967.5
ENST00000513894.5
ENST00000515503.5
ENST00000515718.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS GCA 72 bp GGTAGGTCTGTGTCCTCAGGACCTCTGACGGCGATTTaGAGAATGTTACTTCTCCCTGCCCATCCAAGCACC +
Preference number: 6 (lower is better)
Translates to: GRSVSSGPLTAI*RMLLLPAHPST
Trigger: GGTGCTTGGATGGGCAGGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGGTCCTGAGGACACAGACCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000381799.10
ENST00000503941.5
ENST00000505618.5
ENST00000507851.5
ENST00000508513.5
ENST00000511121.5
ENST00000515718.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS CAA 90 bp AACCACGTGGCCAAGGAGGCTGAGAGGCCTAGAGGTGAGTGTCCTTaGGACTCGATGAAATCCTTCCGTTCTCCAAAGCATCCTCGTGCT +
Preference number: 6 (lower is better)
Translates to: NHVAKEAERPRGECP*DSMKSFRSPKHPRA
Trigger: AGCACGAGGATGCTTTGGAGAACGGAAGGATTTCATCGAGTCCAAAGGACACTCACCTCTAGGCCTCTCAGCCTCCTTGGCCACGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515503.5
ENST00000622175.4
CDS TCA 72 bp AATGCAAGCCAGGTAGGTCTGTGTCCTCAGGACCTCTaGCGGCGATTTGCAGAATGTTACTTCTCCCTGCCC +
Preference number: 6 (lower is better)
Translates to: NASQVGLCPQDL*RRFAECYFSLP
Trigger: GGGCAGGGAGAAGTAACATTCTGCAAATCGCCGTCAGAGGTCCTGAGGACACAGACCTACCTGGCTTGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000381799.10
ENST00000503941.5
ENST00000505618.5
ENST00000507851.5
ENST00000508513.5
ENST00000511121.5
ENST00000515718.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS GCA 72 bp GAGCTCTCGGAAGCTTGGAGAAACCACCAGCTCATCTaGAGACTCTCAGTAGCAGAACAACCACGTGGCCAA +
Preference number: 6 (lower is better)
Translates to: ELSEAWRNHQLI*RLSVAEQPRGQ
Trigger: TTGGCCACGTGGTTGTTCTGCTACTGAGAGTCTGCAGATGAGCTGGTGGTTTCTCCAAGCTTCCGAGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515503.5
ENST00000622175.4
CDS TCA 72 bp CTGAGAGGCCTAGAGGTGAGTGTCCTTTGGACTCGATaGAATCCTTCCGTTCTCCAAAGCATCCTCGTGCTG +
Preference number: 6 (lower is better)
Translates to: LRGLEVSVLWTR*NPSVLQSILVL
Trigger: CAGCACGAGGATGCTTTGGAGAACGGAAGGATTTCATCGAGTCCAAAGGACACTCACCTCTAGGCCTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515503.5
ENST00000622175.4
CDS CAA 90 bp TGGTCAGTCTGGGTGGCCACCACCAGCACAGGGGTACAGGGCAAGTaGCTCCTAATTTCACCAATCCACTTGTTCTTCAAGTTCAGGAAT +
Preference number: 6 (lower is better)
Translates to: WSVWVATTSTGVQGK*LLISPIHLFFKFRN
Trigger: ATTCCTGAACTTGAAGAACAAGTGGATTGGTGAAATTAGGAGCAACTTGCCCTGTACCCCTGTGCTGGTGGTGGCCACCCAGACTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000381799.10
ENST00000505618.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS CCA 72 bp AGCATCCTCGTGCTTTGCCGGACAAAAAGGCAGCCGTaGGTCATTATCACTCACTTGCCTCCCAAATGTTCA +
Preference number: 6 (lower is better)
Translates to: SILVLCRTKRQP*VIITHLPPKCS
Trigger: TGAACATTTGGGAGGCAAGTGAGTGATAATGACCCACGGCTGCCTTTTTGTCCGGCAAAGCACGAGGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514839.1
CDS CAA 72 bp CTAGCCATGTTGGAAACTGAGAGAGCTCTCGGAAGCTaGGAGAAACCACCAGCTCATCTGCAGACTCTCAGT +
Preference number: 6 (lower is better)
Translates to: LAMLETERALGS*EKPPAHLQTLS
Trigger: ACTGAGAGTCTGCAGATGAGCTGGTGGTTTCTCCAAGCTTCCGAGAGCTCTCTCAGTTTCCAACATGGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515503.5
ENST00000622175.4
CDS TCA 72 bp GTTACTTCTCCCTGCCCATCCAAGCACCGTCTGCTTTaGAAACCTCCAAAGCCTAGTCTTCAACTGGTGTGT +
Preference number: 6 (lower is better)
Translates to: VTSPCPSKHRLL*KPPKPSLQLVC
Trigger: ACACACCAGTTGAAGACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTTGGATGGGCAGGGAGAAGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000381799.10
ENST00000503754.5
ENST00000503941.5
ENST00000503978.1
ENST00000505618.5
ENST00000507851.5
ENST00000508513.5
ENST00000511121.5
ENST00000515718.5
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS TCA 72 bp GTTACTTCTCCCTGCCCATCCAAGCACCGTCTGCTTTaGAAACCTCCAAAGCCTAGTCTTCAACTCAGTAGC +
Preference number: 6 (lower is better)
Translates to: VTSPCPSKHRLL*KPPKPSLQLSS
Trigger: GCTACTGAGTTGAAGACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTTGGATGGGCAGGGAGAAGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614836.1
CDS GCA 72 bp TCTTTGGGTCAAGGGCCCGAGCTCCTAGGGAATGACTaGAAAGCACAGGACATGCACAGTGATGTAGAAATT +
Preference number: 6 (lower is better)
Translates to: SLGQGPELLGND*KAQDMHSDVEI
Trigger: AATTTCTACATCACTGTGCATGTCCTGTGCTTTGCAGTCATTCCCTAGGAGCTCGGGCCCTTGACCCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505618.5
CDS CCA 72 bp TTCACACTGGAAGAACTGAAAATACAACAGTTGGGCTaGCAGGGAGTCCACCCCAAGATGGTTGGGTTAGTG +
Preference number: 6 (lower is better)
Translates to: FTLEELKIQQLG*QGVHPKMVGLV
Trigger: CACTAACCCAACCATCTTGGGGTGGACTCCCTGCCAGCCCAACTGTTGTATTTTCAGTTCTTCCAGTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000381799.10
ENST00000513894.5
ENST00000514143.1
ENST00000514839.1
ENST00000515503.5
ENST00000515702.1
ENST00000515718.5
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS CAA 72 bp ATGAAATCCTTCCGTTCTCCAAAGCATCCTCGTGCTTaGCCGGACAAAAAGGCAGCCGTGGGTCATTATCAC +
Preference number: 6 (lower is better)
Translates to: MKSFRSPKHPRA*PDKKAAVGHYH
Trigger: GTGATAATGACCCACGGCTGCCTTTTTGTCCGGCAAAGCACGAGGATGCTTTGGAGAACGGAAGGATTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514839.1
CDS CAA 90 bp CGAGAGCGTTCTCCACGGCTTCAGTTTCTGATGGATCTAGCCATGTaGGAAACTTATTCACTGGATGTAGCTCCGAATGGCTGTCTCCTA +
Preference number: 6 (lower is better)
Translates to: RERSPRLQFLMDLAM*ETYSLDVAPNGCLL
Trigger: TAGGAGACAGCCATTCGGAGCTACATCCAGTGAATAAGTTTCCAACATGGCTAGATCCATCAGAAACTGAAGCCGTGGAGAACGCTCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505618.5
CDS TCA 72 bp TCTCATCCAGTGTCAATCCACTGTATGACCGTGACATaGGAATGTGGCCTCATCTTACCACTTCCAGTAGGG +
Preference number: 6 (lower is better)
Translates to: SHPVSIHCMTVT*ECGLILPLPVG
Trigger: CCCTACTGGAAGTGGTAAGATGAGGCCACATTCTCATGTCACGGTCATACAGTGGATTGACACTGGATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514143.1
CDS TCA 72 bp GATCTGGATGCTGGTTCCACAAGTGTGTGCAGTTTGTaGAAATCCACCAAGCTGTATACCCACGTGGTGTTC +
Preference number: 6 (lower is better)
Translates to: DLDAGSTSVCSL*KSTKLYTHVVF
Trigger: GAACACCACGTGGGTATACAGCTTGGTGGATTTTCACAAACTGCACACACTTGTGGAACCAGCATCCAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508513.5
ENST00000610353.4
ENST00000615577.4
CDS GCA 72 bp AGAATGTTACTTCTCCCTGCCCATCCAAGCACCGTCTaGTTTGAAAACCTCCAAAGCCTAGTCTTCAACTGG +
Preference number: 6 (lower is better)
Translates to: RMLLLPAHPSTV*FENLQSLVFNW
Trigger: CCAGTTGAAGACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTTGGATGGGCAGGGAGAAGTAACATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000381799.10
ENST00000503754.5
ENST00000503941.5
ENST00000503978.1
ENST00000505618.5
ENST00000507851.5
ENST00000508513.5
ENST00000511121.5
ENST00000515718.5
ENST00000610353.4
ENST00000613272.4
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS CCA 72 bp AGTGTCAATCCACTGTATGACCGTGACATGAGAATGTaGCCTCATCTTACCACTTCCAGTAGGGTTGGCTGT +
Preference number: 6 (lower is better)
Translates to: SVNPLYDRDMRM*PHLTTSSRVGC
Trigger: ACAGCCAACCCTACTGGAAGTGGTAAGATGAGGCCACATTCTCATGTCACGGTCATACAGTGGATTGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514143.1
CDS CAA 90 bp GTGCTTTGCCGGACAAAAAGGCAGCCGTGGGTCATTATCACTCACTaGCCTCCCAAATGTTCATACCAAGGACAGAAGTTTTGTACCTTG +
Preference number: 6 (lower is better)
Translates to: VLCRTKRQPWVIITH*PPKCSYQGQKFCTL
Trigger: CAAGGTACAAAACTTCTGTCCTTGGTATGAACATTTGGGAGGCAAGTGAGTGATAATGACCCACGGCTGCCTTTTTGTCCGGCAAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514839.1
CDS GCA 72 bp TCCGGCCCAGTTCTTGATGTTTTAAAGGACATCTGTTaGTTCCTGATCTGGATGCTGGTTCCACAAGTGTGT +
Preference number: 6 (lower is better)
Translates to: SGPVLDVLKDIC*FLIWMLVPQVC
Trigger: ACACACTTGTGGAACCAGCATCCAGATCAGGAAGCAACAGATGTCCTTTAAAACATCAAGAACTGGGCCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508513.5
ENST00000610353.4
ENST00000615577.4
CDS GCA 72 bp AGAATGTTACTTCTCCCTGCCCATCCAAGCACCGTCTaGTTTGAAAACCTCCAAAGCCTAGTCTTCAACTCA +
Preference number: 6 (lower is better)
Translates to: RMLLLPAHPSTV*FENLQSLVFNS
Trigger: TGAGTTGAAGACTAGGCTTTGGAGGTTTTCAAAGCAGACGGTGCTTGGATGGGCAGGGAGAAGTAACATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614836.1
CDS CAA 72 bp TCTCCACGGCTTCAGTTTCTGATGGATCTAGCCATGTaGGAAACTTATTCACTGGATGTAGCTCCGAATGGC +
Preference number: 6 (lower is better)
Translates to: SPRLQFLMDLAM*ETYSLDVAPNG
Trigger: GCCATTCGGAGCTACATCCAGTGAATAAGTTTCCAACATGGCTAGATCCATCAGAAACTGAAGCCGTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505618.5
CDS CAA 72 bp CGGACAAAAAGGCAGCCGTGGGTCATTATCACTCACTaGCCTCCCAAATGTTCATACCAAGGACAGAAGTTT +
Preference number: 6 (lower is better)
Translates to: RTKRQPWVIITH*PPKCSYQGQKF
Trigger: AAACTTCTGTCCTTGGTATGAACATTTGGGAGGCAAGTGAGTGATAATGACCCACGGCTGCCTTTTTGTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514839.1
CDS GCA 72 bp GGACAAAAAGGCAGCCGTGGGTCATTATCACTCACTTaGCTCCCAAATGTTCATACCAAGGACAGAAGTTTT +
Preference number: 6 (lower is better)
Translates to: GQKGSRGSLSLT*LPNVHTKDRSF
Trigger: AAAACTTCTGTCCTTGGTATGAACATTTGGGAGGCAAGTGAGTGATAATGACCCACGGCTGCCTTTTTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514839.1
CDS CCA 72 bp TCTAGCCATGTTGGAAACAGAAGGTCCCTGCTTACATaGAGTGAATCAAGGGTGATAAAAAGTCCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: SSHVGNRRSLLT*SESRVIKSPLP
Trigger: AGGGAGAGGACTTTTTATCACCCTTGATTCACTCCATGTAAGCAGGGACCTTCTGTTTCCAACATGGCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000503978.1
ENST00000513894.5
ENST00000619474.4
CDS GCA 72 bp CCAAGCTGTATACCCACGTGGTGTTCACTTTCCTGTTaGAGAATGCCGAAGAAATGTCTTGACAGTAAAATG +
Preference number: 6 (lower is better)
Translates to: PSCIPTWCSLSC*RMPKKCLDSKM
Trigger: CATTTTACTGTCAAGACATTTCTTCGGCATTCTGCAACAGGAAAGTGAACACCACGTGGGTATACAGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610353.4
CDS TCA 72 bp AATTTCACCAATCCACTTGTTCTTCAAGTTCAGGAATaGGTTATGGTTGGCCACAGAGTAGCACATCAGCAC +
Preference number: 6 (lower is better)
Translates to: NFTNPLVLQVQE*VMVGHRVAHQH
Trigger: GTGCTGATGTGCTACTCTGTGGCCAACCATAACTCATTCCTGAACTTGAAGAACAAGTGGATTGGTGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000381799.10
ENST00000503941.5
ENST00000505618.5
ENST00000507851.5
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS TCA 72 bp CCCATTAGTCTTTGGGGTGCATACATAAGTGTTGTGTaGAGTCTCTTGGGGTTTAGAAGATCTTGCACTCAT +
Preference number: 6 (lower is better)
Translates to: PISLWGAYISVV*SLLGFRRSCTH
Trigger: ATGAGTGCAAGATCTTCTAAACCCCAAGAGACTTCACACAACACTTATGTATGCACCCCAAAGACTAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381799.10
ENST00000610353.4
ENST00000613272.4
ENST00000614836.1
ENST00000615083.4
ENST00000615577.4
ENST00000617441.4
ENST00000619474.4
ENST00000622175.4
CDS CCA 72 bp CTTGATGTTTTAAAGGACATCTGTTGCTTCCTGATCTaGATGCTGGTTCCACAAGTGTGTGCAGTTTGTGAA +
Preference number: 6 (lower is better)
Translates to: LDVLKDICCFLI*MLVPQVCAVCE
Trigger: TTCACAAACTGCACACACTTGTGGAACCAGCATCCAGATCAGGAAGCAACAGATGTCCTTTAAAACATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508513.5
ENST00000610353.4
ENST00000615577.4
CDS CAA 90 bp AAGGGTGATAAAAAGTCCTCTCCCTACCAAATATATCTTCCATCCTaGGAGCAGCCCTTTCTCTTGAGGTTTGGTACTTTGTTGAAATGC +
Preference number: 6 (lower is better)
Translates to: KGDKKSSPYQIYLPS*EQPFLLRFGTLLKC
Trigger: GCATTTCAACAAAGTACCAAACCTCAAGAGAAAGGGCTGCTCCAAGGATGGAAGATATATTTGGTAGGGAGAGGACTTTTTATCACCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503978.1
ENST00000513894.5
ENST00000514839.1
ENST00000619474.4
CDS TCA 72 bp AGGATCAACCTCTCCCTCGTTCCCGAGAATATTAACTaGTTCACACTGGAAGAACTGAAAATACAACAGTTG +
Preference number: 6 (lower is better)
Translates to: RINLSLVPENIN*FTLEELKIQQL
Trigger: CAACTGTTGTATTTTCAGTTCTTCCAGTGTGAATCAGTTAATATTCTCGGGAACGAGGGAGAGGTTGATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000381799.10
ENST00000503754.5
ENST00000513894.5
ENST00000514143.1
ENST00000514839.1
ENST00000515503.5
ENST00000515702.1
ENST00000515718.5
ENST00000610353.4
ENST00000614836.1
ENST00000615083.4
ENST00000619474.4
ENST00000622175.4
CDS CAA 72 bp CCCAAATGTTCATACCAAGGACAGAAGTTTTGTACCTaGTACAAAGCACTCCATACATGGAGTGAATCAAGG +
Preference number: 6 (lower is better)
Translates to: PKCSYQGQKFCT*YKALHTWSESR
Trigger: CCTTGATTCACTCCATGTATGGAGTGCTTTGTACAAGGTACAAAACTTCTGTCCTTGGTATGAACATTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514839.1
CDS CCA 72 bp CATGTTGGAAACTTATTCACTGGATGTAGCTCCGAATaGCTGTCTCCTAAAATCAAATCCACTCTAAAAGGA +
Preference number: 6 (lower is better)
Translates to: HVGNLFTGCSSE*LSPKIKSTLKG
Trigger: TCCTTTTAGAGTGGATTTGATTTTAGGAGACAGCCATTCGGAGCTACATCCAGTGAATAAGTTTCCAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505618.5