Pregenerated sensors for RHOD (Homo sapiens)
Ensembl gene IDs: ENSG00000173156Ensembl transcript IDs: ENST00000308831.7, ENST00000532559.1, ENST00000533360.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGACTCCCAGGCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTaGAGTGGAGTTCGGCGGTCACAGCCTAGGGACCGGGTCCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: RTPRPQGLALVAPVC*SGVRRSQPRDRVQP Trigger: GGGCTGGACCCGGTCCCTAGGCTGTGACCGCCGAACTCCACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGGGAGTCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| 3UTR TCA 90 bp | CGGCTCCAGGATGTCGGTCCGGGACCGGGCATAGGGGTTAGCGAGTaGTTCTCGGGCACCGCAGGACGAGCCCTACACAGAGCAGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: RLQDVGPGPGIGVSE*FSGTAGRALHRAGG Trigger: CCCACCTGCTCTGTGTAGGGCTCGTCCTGCGGTGCCCGAGAATCACTCGCTAACCCCTATGCCCGGTCCCGGACCGACATCCTGGAGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| 3UTR CCA 90 bp | CCAGGAACCCCCTTTCTCAGTCCAGGACTCCCAGGCCTCAGGGCCTaGCTTTGGTGGCGCCCGTCTGTTGCAGTGGAGTTCGGCGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: PGTPFLSPGLPGLRA*LWWRPSVAVEFGGH Trigger: GTGACCGCCGAACTCCACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGGGAGTCCTGGACTGAGAAAGGGGGTTCCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| 3UTR GCA 90 bp | GTGGGTTCTGGCCAGAGGGACCTAAGAACATTAGGTCCTGGCAGGTaGAGCCCTGGGAGCAGCCACGAGGGGGCATCAGGCTGCACAGGC | + |
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Preference number: 1 (lower is better) Translates to: VGSGQRDLRTLGPGR*SPGSSHEGASGCTG Trigger: GCCTGTGCAGCCTGATGCCCCCTCGTGGCTGCTCCCAGGGCTGCACCTGCCAGGACCTAATGTTCTTAGGTCCCTCTGGCCAGAACCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| 3UTR CCA 90 bp | ACCCCCTTTCTCAGTCCAGGACTCCCAGGCCTCAGGGCCTGGCTTTaGTGGCGCCCGTCTGTTGCAGTGGAGTTCGGCGGTCACAGCCTA | + |
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Preference number: 1 (lower is better) Translates to: TPFLSPGLPGLRAWL*WRPSVAVEFGGHSL Trigger: TAGGCTGTGACCGCCGAACTCCACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGGGAGTCCTGGACTGAGAAAGGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| 3UTR CCA 90 bp | CGAGTGATTCTCGGGCACCGCAGGACGAGCCCTACACAGAGCAGGTaGGCCCAGGAACCCCCTTTCTCAGTCCAGGACTCCCAGGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: RVILGHRRTSPTQSR*AQEPPFSVQDSQAS Trigger: TGAGGCCTGGGAGTCCTGGACTGAGAAAGGGGGTTCCTGGGCCCACCTGCTCTGTGTAGGGCTCGTCCTGCGGTGCCCGAGAATCACTCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| 3UTR CCA 90 bp | TACAGTTACCAGTATGACAGGTGGGAAGGGGCCGGGTGTGGGTTCTaGCCAGAGGGACCTAAGAACATTAGGTCCTGGCAGGTGCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: YSYQYDRWEGAGCGF*PEGPKNIRSWQVQP Trigger: GGGCTGCACCTGCCAGGACCTAATGTTCTTAGGTCCCTCTGGCCAGAACCCACACCCGGCCCCTTCCCACCTGTCATACTGGTAACTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| 3UTR-3UTR GCA 90 bp | GGGCACCGCAGGACGAGCCCTACACAGAGCAGGTGGGCCCAGGAACCCCCTTTCAGCAGGTCAGCGCCCTaGCCCTTCCCGCGTCGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GHRRTSPTQSRWAQEPPFSRSAP*PFPRRW Trigger: CCAGCGACGCGGGAAGGGGCAGGGCGCTGACCTGCT...GAAAGGGGGTTCCTGGGCCCACCTGCTCTGTGTAGGGCTCGTCCTGCGGTGCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| 3UTR-3UTR CCA 90 bp | ATTCTCGGGCACCGCAGGACGAGCCCTACACAGAGCAGGTGGGCCCAGGAACCCCCAGGCCTCAGGGCCTaGCTTTGGTGGCGCCCGTCT | + |
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Preference number: 2 (lower is better) Translates to: ILGHRRTSPTQSRWAQEPPGLRA*LWWRPS Trigger: AGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGG...GGGTTCCTGGGCCCACCTGCTCTGTGTAGGGCTCGTCCTGCGGTGCCCGAGAAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| 3UTR-3UTR CAA 90 bp | GAGGGGGCATCAGGCTGCACAGGCGGCTCCAGGATGTCGGTCCGGGACCGGGCAGGTGGCGCCCGTCTGTaGCAGTGGAGTTCGGCGGTC | + |
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Preference number: 3 (lower is better) Translates to: EGASGCTGGSRMSVRDRAGGARL*QWSSAV Trigger: GACCGCCGAACTCCACTGCAACAGACGGGCGCCACC...TGCCCGGTCCCGGACCGACATCCTGGAGCCGCCTGTGCAGCCTGATGCCCCCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| 3UTR GCA 72 bp | AGGCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTaGAGTGGAGTTCGGCGGTCACAGCCTAGGGACCGG | + |
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Preference number: 3 (lower is better) Translates to: RPQGLALVAPVC*SGVRRSQPRDR Trigger: CCGGTCCCTAGGCTGTGACCGCCGAACTCCACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| 3UTR CCA 72 bp | CTCAGTCCAGGACTCCCAGGCCTCAGGGCCTGGCTTTaGTGGCGCCCGTCTGTTGCAGTGGAGTTCGGCGGT | + |
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Preference number: 3 (lower is better) Translates to: LSPGLPGLRAWL*WRPSVAVEFGG Trigger: ACCGCCGAACTCCACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGGGAGTCCTGGACTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| 3UTR GCA 72 bp | GGCCAGAGGGACCTAAGAACATTAGGTCCTGGCAGGTaGAGCCCTGGGAGCAGCCACGAGGGGGCATCAGGC | + |
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Preference number: 3 (lower is better) Translates to: GQRDLRTLGPGR*SPGSSHEGASG Trigger: GCCTGATGCCCCCTCGTGGCTGCTCCCAGGGCTGCACCTGCCAGGACCTAATGTTCTTAGGTCCCTCTGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| 3UTR TCA 72 bp | GATGTCGGTCCGGGACCGGGCATAGGGGTTAGCGAGTaGTTCTCGGGCACCGCAGGACGAGCCCTACACAGA | + |
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Preference number: 3 (lower is better) Translates to: DVGPGPGIGVSE*FSGTAGRALHR Trigger: TCTGTGTAGGGCTCGTCCTGCGGTGCCCGAGAATCACTCGCTAACCCCTATGCCCGGTCCCGGACCGACATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR TCA 90 bp | GCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTGGAGTTCGGCGGTCTGCGACCGCGGCTGCTaGGGGCCACCTCGGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ASGPGFGGARLLQWSSAVCDRGC*GPPRRP Trigger: AGGCCGCCGAGGTGGCCCTCAGCAGCCGCGGTCGCA...GACCGCCGAACTCCACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | GGAGTTCGGCGGTCACAGCCTAGGGACCGGGTCCAGCCCAGCCAGCTCAGCAGCCCCTTCCCGCGTCGCTaGGACGCCCCGAGCCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GVRRSQPRDRVQPSQLSSPFPRR*DAPSRS Trigger: TGAGCGGCTCGGGGCGTCCCAGCGACGCGGGAAGGG...GCTGCTGAGCTGGCTGGGCTGGACCCGGTCCCTAGGCTGTGACCGCCGAACTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR TCA 90 bp | AGGGGGCATCAGGCTGCACAGGCGGCTCCAGGATGTCGGTCCGGGACCGGGCATCCACCAGGACCACCTTaGCGGACCGCACGCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RGHQAAQAAPGCRSGTGHPPGPP*RTARLV Trigger: CACCAGGCGTGCGGTCCGTCAAGGTGGTCCTGGTGG...ATGCCCGGTCCCGGACCGACATCCTGGAGCCGCCTGTGCAGCCTGATGCCCCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | AGGACTCCCAGGCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTGGAGACGGACCGCACGCCTaGTGGCGCCTCCTCACCCGC | + |
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Preference number: 4 (lower is better) Translates to: RTPRPQGLALVAPVCCSGDGPHA*WRLLTR Trigger: GCGGGTGAGGAGGCGCCACCAGGCGTGCGGTCCGTC...TCCACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGGGAGTCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR GCA 90 bp | TCCAGGACTCCCAGGCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTAGCAGGTCAGCGCCCTaGCCCTTCCCGCGTCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SRTPRPQGLALVAPVCCSSRSAP*PFPRRW Trigger: CCAGCGACGCGGGAAGGGGCAGGGCGCTGACCTGCT...ACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGGGAGTCCTGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | GAGGGGGCATCAGGCTGCACAGGCGGCTCCAGGATGTCGGTCCGGGACCGGGCAAGGGCCTGGCTTTGGTaGCGCCCGTCTGTTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: EGASGCTGGSRMSVRDRARAWLW*RPSVAV Trigger: CACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCT...TGCCCGGTCCCGGACCGACATCCTGGAGCCGCCTGTGCAGCCTGATGCCCCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | GTGGAGTTCGGCGGTCACAGCCTAGGGACCGGGTCCAGCCCAGCCAGCTCAGCAGGAAGGGGCCGGGTGTaGGTTCTGGCCAGAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: VEFGGHSLGTGSSPASSAGRGRV*VLARGT Trigger: GGTCCCTCTGGCCAGAACCCACACCCGGCCCCTTCC...TGCTGAGCTGGCTGGGCTGGACCCGGTCCCTAGGCTGTGACCGCCGAACTCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | AGGGGGCATCAGGCTGCACAGGCGGCTCCAGGATGTCGGTCCGGGACCGGGCATGCCCGTCTGTTGCAGTaGAGTTCGGCGGTCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: RGHQAAQAAPGCRSGTGHARLLQ*SSAVTA Trigger: GGCTGTGACCGCCGAACTCCACTGCAACAGACGGGC...ATGCCCGGTCCCGGACCGACATCCTGGAGCCGCCTGTGCAGCCTGATGCCCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | CCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTGGAGTTCGGCGGTCACCAGGCCTCAGGGCCTaGCTTTGGTGGCGCCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: PQGLALVAPVCCSGVRRSPGLRA*LWWRPS Trigger: AGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGG...TGACCGCCGAACTCCACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR GCA 90 bp | TCAGTCCAGGACTCCCAGGCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGGAGGGGGCATCAGGCTaGACAGGCGGCTCCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: SVQDSQASGPGFGGARLLEGASG*TGGSRM Trigger: CATCCTGGAGCCGCCTGTGCAGCCTGATGCCCCCTC...CAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGGGAGTCCTGGACTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | GAGGGGGCATCAGGCTGCACAGGCGGCTCCAGGATGTCGGTCCGGGACCGGGCATCCTGGAAGACGGCGTaGACGTTGTCATGGAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: EGASGCTGGSRMSVRDRASWKTA*TLSWSR Trigger: TCGGCTCCATGACAACGTCCACGCCGTCTTCCAGGA...TGCCCGGTCCCGGACCGACATCCTGGAGCCGCCTGTGCAGCCTGATGCCCCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | CCCTGGGAGCAGCCACGAGGGGGCATCAGGCTGCACAGGCGGCTCCAGGATGTCTACCAGTATGACAGGTaGGAAGGGGCCGGGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PWEQPRGGIRLHRRLQDVYQYDR*EGAGCG Trigger: CCCACACCCGGCCCCTTCCCACCTGTCATACTGGTA...GACATCCTGGAGCCGCCTGTGCAGCCTGATGCCCCCTCGTGGCTGCTCCCAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR GCA 90 bp | AGGACTCCCAGGCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTGGAGTGGCGCCCGTCTGTTaGAGTGGAGTTCGGCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RTPRPQGLALVAPVCCSGVAPVC*SGVRRS Trigger: TGACCGCCGAACTCCACTGCAACAGACGGGCGCCAC...TCCACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGGGAGTCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | GGGCACCGCAGGACGAGCCCTACACAGAGCAGGTGGGCCCAGGAACCCCCTTTCACCGCTCAAACACCGTaGGGGTGTAGCTCTCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GHRRTSPTQSRWAQEPPFTAQTP*GCSSRG Trigger: TCCCCGAGAGCTACACCCCCACGGTGTTTGAGCGGT...GAAAGGGGGTTCCTGGGCCCACCTGCTCTGTGTAGGGCTCGTCCTGCGGTGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | GCCACGAGGGGGCATCAGGCTGCACAGGCGGCTCCAGGATGTCGGTCCGGGACCGCTGTGTCCCAGATGTaGAGGTGCACAGGTTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: ATRGHQAAQAAPGCRSGTAVSQM*RCTGLP Trigger: AGGCAAACCTGTGCACCTCCACATCTGGGACACAGC...GGTCCCGGACCGACATCCTGGAGCCGCCTGTGCAGCCTGATGCCCCCTCGTGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | GCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTGGAGTTCGGCGGTCACAGCCTAACCTCGGCGGCCTCCTaGAAGACGGCGTGGACGTTG | + |
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Preference number: 4 (lower is better) Translates to: AWLWWRPSVAVEFGGHSLTSAAS*KTAWTL Trigger: CAACGTCCACGCCGTCTTCCAGGAGGCCGCCGAGGT...TAGGCTGTGACCGCCGAACTCCACTGCAACAGACGGGCGCCACCAAAGCCAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | TCCAGGACTCCCAGGCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTCTCAGGGCCTGGCTTTaGTGGCGCCCGTCTGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: SRTPRPQGLALVAPVCCSLRAWL*WRPSVA Trigger: TGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAG...ACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGGGAGTCCTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | GGGCACCGCAGGACGAGCCCTACACAGAGCAGGTGGGCCCAGGAACCCCCTTTCGCCGGGTGTGGGTTCTaGCCAGAGGGACCTAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: GHRRTSPTQSRWAQEPPFAGCGF*PEGPKN Trigger: GTTCTTAGGTCCCTCTGGCCAGAACCCACACCCGGC...GAAAGGGGGTTCCTGGGCCCACCTGCTCTGTGTAGGGCTCGTCCTGCGGTGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR TCA 90 bp | GGAGTTCGGCGGTCACAGCCTAGGGACCGGGTCCAGCCCAGCCAGCTCAGCAGCTGCAGCCCACGACGATaGTGGGTACCTTCTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GVRRSQPRDRVQPSQLSSCSPRR*WVPSCR Trigger: TCTGCAAGAAGGTACCCATCATCGTCGTGGGCTGCA...GCTGCTGAGCTGGCTGGGCTGGACCCGGTCCCTAGGCTGTGACCGCCGAACTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR GCA 90 bp | GCCACGAGGGGGCATCAGGCTGCACAGGCGGCTCCAGGATGTCGGTCCGGGACCCCAGTGATTTGTCCTTaGGCAGGTCAGTCTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ATRGHQAAQAAPGCRSGTPVICP*AGQSCS Trigger: GCTGCAAGACTGACCTGCGCAAGGACAAATCACTGG...GGTCCCGGACCGACATCCTGGAGCCGCCTGTGCAGCCTGATGCCCCCTCGTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR TCA 90 bp | GCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTGGAGTTCGGCGGTCAGCTGTTCGGGCTGGTaGCATCGAAGCAAAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ASGPGFGGARLLQWSSAVSCSGW*HRSKAA Trigger: TGCTGCTTTGCTTCGATGTCACCAGCCCGAACAGCT...GACCGCCGAACTCCACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR TCA 90 bp | TCCAGGACTCCCAGGCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTATAGGGGTTAGCGAGTaGTTCTCGGGCACCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SRTPRPQGLALVAPVCCSIGVSE*FSGTAG Trigger: TCCTGCGGTGCCCGAGAATCACTCGCTAACCCCTAT...ACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGGGAGTCCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR TCA 90 bp | TGCAGTGGAGTTCGGCGGTCACAGCCTAGGGACCGGGTCCAGCCCAGCCAGCTCTTACAGTTACCAGTATaGCAGGTGGGAAGGGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: CSGVRRSQPRDRVQPSQLLQLPV*QVGRGR Trigger: CCGGCCCCTTCCCACCTGTCATACTGGTAACTGTAA...GAGCTGGCTGGGCTGGACCCGGTCCCTAGGCTGTGACCGCCGAACTCCACTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | TCCAGGACTCCCAGGCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTACCACGCAAAAGCCCTaGGTAATCCGCCGCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SRTPRPQGLALVAPVCCSTTQKP*VIRRQK Trigger: CTTCTGGCGGCGGATTACCCAGGGCTTTTGCGTGGT...ACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGGGAGTCCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | GCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTGGAGTTCGGCGGTCACAGCCTACCTACACAGAGCAGGTaGGCCCAGGAACCCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: AWLWWRPSVAVEFGGHSLPTQSR*AQEPPF Trigger: GAAAGGGGGTTCCTGGGCCCACCTGCTCTGTGTAGG...TAGGCTGTGACCGCCGAACTCCACTGCAACAGACGGGCGCCACCAAAGCCAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR GCA 90 bp | GCCGGGTGTGGGTTCTGGCCAGAGGGACCTAAGAACATTAGGTCCTGGCAGGTGTTAGGTCCTGGCAGGTaGAGCCCTGGGAGCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: AGCGFWPEGPKNIRSWQVLGPGR*SPGSSH Trigger: GTGGCTGCTCCCAGGGCTGCACCTGCCAGGACCTAA...CACCTGCCAGGACCTAATGTTCTTAGGTCCCTCTGGCCAGAACCCACACCCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR GCA 90 bp | CGGGCACCGCAGGACGAGCCCTACACAGAGCAGGTGGGCCCAGGAACCCCCTTTGGTTTGCCTTTCACTTaGAGGTTGACCATGTACCGC | + |
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Preference number: 4 (lower is better) Translates to: RAPQDEPYTEQVGPGTPFGLPFT*RLTMYR Trigger: GCGGTACATGGTCAACCTGCAAGTGAAAGGCAAACC...AAAGGGGGTTCCTGGGCCCACCTGCTCTGTGTAGGGCTCGTCCTGCGGTGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR GCA 90 bp | TGGTGGCGCCCGTCTGTTGCAGTGGAGTTCGGCGGTCACAGCCTAGGGACCGGGTCCCAGATGTGGAGGTaGACAGGTTTGCCTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: WWRPSVAVEFGGHSLGTGSQMWR*TGLPFT Trigger: AGTGAAAGGCAAACCTGTGCACCTCCACATCTGGGA...CCCGGTCCCTAGGCTGTGACCGCCGAACTCCACTGCAACAGACGGGCGCCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | GGGTGTGGGTTCTGGCCAGAGGGACCTAAGAACATTAGGTCCTGGCAGGTGCAGGCGTGGACGTTGTCATaGAGCCGAGCCGAGCACTCG | + |
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Preference number: 4 (lower is better) Translates to: GCGFWPEGPKNIRSWQVQAWTLS*SRAEHS Trigger: CGAGTGCTCGGCTCGGCTCCATGACAACGTCCACGC...CTGCACCTGCCAGGACCTAATGTTCTTAGGTCCCTCTGGCCAGAACCCACACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR TCA 90 bp | CCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTGGAGTTCGGCGGTCACTTTCACTTGCAGGTTaGCCATGTACCGCTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: PQGLALVAPVCCSGVRRSLSLAG*PCTAQT Trigger: TGTTTGAGCGGTACATGGTCAACCTGCAAGTGAAAG...TGACCGCCGAACTCCACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR TCA 90 bp | GCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTGGAGTTCGGCGGTCACCTTCTTGCAGAAATaGTTCACTTCTGGGTACCAC | + |
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Preference number: 4 (lower is better) Translates to: ASGPGFGGARLLQWSSAVTFLQK*FTSGYH Trigger: GTGGTACCCAGAAGTGAATCATTTCTGCAAGAAGGT...GACCGCCGAACTCCACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR TCA 90 bp | GGGTGTGGGTTCTGGCCAGAGGGACCTAAGAACATTAGGTCCTGGCAGGTGCAGGAGCTTGTTCACCAGTaGTTTGTCCTTGCGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GCGFWPEGPKNIRSWQVQELVHQ*FVLAQV Trigger: GACCTGCGCAAGGACAAATCACTGGTGAACAAGCTC...CTGCACCTGCCAGGACCTAATGTTCTTAGGTCCCTCTGGCCAGAACCCACACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CCA 90 bp | GTTTTTCTTGTTACAGTTACCAGTATGACAGGTGGGAAGGGGCCGGGTGTGGGTGAAATGATTCACTTCTaGGTACCACCGGTTAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: VFLVTVTSMTGGKGPGVGEMIHF*VPPVKD Trigger: ATCTTTAACCGGTGGTACCCAGAAGTGAATCATTTC...ACCCACACCCGGCCCCTTCCCACCTGTCATACTGGTAACTGTAACAAGAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS CCA 90 bp | GCAGCCGCCGTCGCCCACCAGGACCACCTTGACGGACCGCACGCCTaGTGGCGCCTCCTCACCCGCGGCCTGGGCCGCCGTCATCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: AAAVAHQDHLDGPHA*WRLLTRGLGRRHPG Trigger: CCCGGGATGACGGCGGCCCAGGCCGCGGGTGAGGAGGCGCCACCAGGCGTGCGGTCCGTCAAGGTGGTCCTGGTGGGCGACGGCGGCTGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000308831.7 ENST00000532559.1 ENST00000533360.2 |
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| CDS CCA 90 bp | GTCGCTGGGACGCCCCGAGCCGCTCAGGTCACCACGCAAAAGCCCTaGGTAATCCGCCGCCAGAAGTTGCGACCGCGGCTGCTGAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: VAGTPRAAQVTTQKP*VIRRQKLRPRLLRA Trigger: GGCCCTCAGCAGCCGCGGTCGCAACTTCTGGCGGCGGATTACCCAGGGCTTTTGCGTGGTGACCTGAGCGGCTCGGGGCGTCCCAGCGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000532559.1 |
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| CDS-3UTR CAA 90 bp | CAGCCACGAGGGGGCATCAGGCTGCACAGGCGGCTCCAGGATGTCGGTCCGGGACCCACCAGGACCACCTaGACGGACCGCACGCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: QPRGGIRLHRRLQDVGPGPTRTT*TDRTPG Trigger: ACCAGGCGTGCGGTCCGTCAAGGTGGTCCTGGTGGG...TCCCGGACCGACATCCTGGAGCCGCCTGTGCAGCCTGATGCCCCCTCGTGGCTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS CCA 90 bp | CAGAAGTTGCGACCGCGGCTGCTGAGGGCCACCTCGGCGGCCTCCTaGAAGACGGCGTGGACGTTGTCATGGAGCCGAGCCGAGCACTCG | + |
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Preference number: 5 (lower is better) Translates to: QKLRPRLLRATSAAS*KTAWTLSWSRAEHS Trigger: CGAGTGCTCGGCTCGGCTCCATGACAACGTCCACGCCGTCTTCCAGGAGGCCGCCGAGGTGGCCCTCAGCAGCCGCGGTCGCAACTTCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000532559.1 |
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| CDS-3UTR CAA 90 bp | TGGTGGCGCCCGTCTGTTGCAGTGGAGTTCGGCGGTCACAGCCTAGGGACCGGGATCCGCCGCCAGAAGTaGCGACCGCGGCTGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: WWRPSVAVEFGGHSLGTGIRRQK*RPRLLR Trigger: CCTCAGCAGCCGCGGTCGCAACTTCTGGCGGCGGAT...CCCGGTCCCTAGGCTGTGACCGCCGAACTCCACTGCAACAGACGGGCGCCACCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CAA 90 bp | GGGCACCGCAGGACGAGCCCTACACAGAGCAGGTGGGCCCAGGAACCCCCTTTCAAGACGGCGTGGACGTaGTCATGGAGCCGAGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: GHRRTSPTQSRWAQEPPFKTAWT*SWSRAE Trigger: CTCGGCTCGGCTCCATGACAACGTCCACGCCGTCTT...GAAAGGGGGTTCCTGGGCCCACCTGCTCTGTGTAGGGCTCGTCCTGCGGTGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CAA 90 bp | CCGGGTGTGGGTTCTGGCCAGAGGGACCTAAGAACATTAGGTCCTGGCAGGTGCCCTCAGGGCCTGGCTTaGGTGGCGCCCGTCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: PGVGSGQRDLRTLGPGRCPQGLA*VAPVCC Trigger: GCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGG...GCACCTGCCAGGACCTAATGTTCTTAGGTCCCTCTGGCCAGAACCCACACCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CAA 90 bp | GCCACGAGGGGGCATCAGGCTGCACAGGCGGCTCCAGGATGTCGGTCCGGGACCCACCGGTTAAAGATGTaGTCAAAGCTGTTCGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: ATRGHQAAQAAPGCRSGTHRLKM*SKLFGL Trigger: CAGCCCGAACAGCTTTGACAACATCTTTAACCGGTG...GGTCCCGGACCGACATCCTGGAGCCGCCTGTGCAGCCTGATGCCCCCTCGTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CAA 90 bp | TCCAGGACTCCCAGGCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTTTGCGCAGGTCAGTCTaGCAGCCCACGACGATGATG | + |
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Preference number: 5 (lower is better) Translates to: SRTPRPQGLALVAPVCCSLRRSV*QPTTMM Trigger: CATCATCGTCGTGGGCTGCAAGACTGACCTGCGCAA...ACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGGGAGTCCTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CAA 90 bp | GAGGGGGCATCAGGCTGCACAGGCGGCTCCAGGATGTCGGTCCGGGACCGGGCACCGTTTCTTCGGAGCTaGTTCACCAGTGATTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: EGASGCTGGSRMSVRDRAPFLRS*FTSDLS Trigger: GGACAAATCACTGGTGAACAAGCTCCGAAGAAACGG...TGCCCGGTCCCGGACCGACATCCTGGAGCCGCCTGTGCAGCCTGATGCCCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CAA 90 bp | GGGTGTGGGTTCTGGCCAGAGGGACCTAAGAACATTAGGTCCTGGCAGGTGCAGGGTGGCGCCCGTCTGTaGCAGTGGAGTTCGGCGGTC | + |
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Preference number: 5 (lower is better) Translates to: GCGFWPEGPKNIRSWQVQGGARL*QWSSAV Trigger: GACCGCCGAACTCCACTGCAACAGACGGGCGCCACC...CTGCACCTGCCAGGACCTAATGTTCTTAGGTCCCTCTGGCCAGAACCCACACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CAA 90 bp | CCCTGGGAGCAGCCACGAGGGGGCATCAGGCTGCACAGGCGGCTCCAGGATGTCAGGTTTGCCTTTCACTaGCAGGTTGACCATGTACCG | + |
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Preference number: 5 (lower is better) Translates to: PWEQPRGGIRLHRRLQDVRFAFH*QVDHVP Trigger: CGGTACATGGTCAACCTGCAAGTGAAAGGCAAACCT...GACATCCTGGAGCCGCCTGTGCAGCCTGATGCCCCCTCGTGGCTGCTCCCAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CAA 90 bp | TCCAGGACTCCCAGGCCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTGCGGTCATAGTCATCTaGCCCTGCTGTGTCCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: SRTPRPQGLALVAPVCCSAVIVI*PCCVPD Trigger: ATCTGGGACACAGCAGGGCAAGATGACTATGACCGC...ACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGGCCTGGGAGTCCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CAA 90 bp | CCTCAGGGCCTGGCTTTGGTGGCGCCCGTCTGTTGCAGTGGAGTTCGGCGGTCATGGAGGTGCACAGGTTaGCCTTTCACTTGCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: PQGLALVAPVCCSGVRRSWRCTG*PFTCRL Trigger: CAACCTGCAAGTGAAAGGCAAACCTGTGCACCTCCA...TGACCGCCGAACTCCACTGCAACAGACGGGCGCCACCAAAGCCAGGCCCTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CAA 90 bp | CCGGGTGTGGGTTCTGGCCAGAGGGACCTAAGAACATTAGGTCCTGGCAGGTGCACCAGTGATTTGTCCTaGCGCAGGTCAGTCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: PGVGSGQRDLRTLGPGRCTSDLS*RRSVLQ Trigger: CTGCAAGACTGACCTGCGCAAGGACAAATCACTGGT...GCACCTGCCAGGACCTAATGTTCTTAGGTCCCTCTGGCCAGAACCCACACCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CAA 90 bp | GCCGGGTGTGGGTTCTGGCCAGAGGGACCTAAGAACATTAGGTCCTGGCAGGTGTTGTTCACCAGTGATTaGTCCTTGCGCAGGTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: AGCGFWPEGPKNIRSWQVLFTSD*SLRRSV Trigger: GACTGACCTGCGCAAGGACAAATCACTGGTGAACAA...CACCTGCCAGGACCTAATGTTCTTAGGTCCCTCTGGCCAGAACCCACACCCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS-3UTR CAA 90 bp | TGTGGGTTCTGGCCAGAGGGACCTAAGAACATTAGGTCCTGGCAGGTGCAGCCCCCTTTCACTTGCAGGTaGACCATGTACCGCTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: CGFWPEGPKNIRSWQVQPPFTCR*TMYRSN Trigger: GTTTGAGCGGTACATGGTCAACCTGCAAGTGAAAGG...GGGCTGCACCTGCCAGGACCTAATGTTCTTAGGTCCCTCTGGCCAGAACCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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| CDS CCA 72 bp | GTCGCCCACCAGGACCACCTTGACGGACCGCACGCCTaGTGGCGCCTCCTCACCCGCGGCCTGGGCCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: VAHQDHLDGPHA*WRLLTRGLGRR Trigger: ACGGCGGCCCAGGCCGCGGGTGAGGAGGCGCCACCAGGCGTGCGGTCCGTCAAGGTGGTCCTGGTGGGCGAC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000308831.7 ENST00000532559.1 ENST00000533360.2 |
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| CDS TCA 72 bp | TCTTCCCGCAGCCGCCGTCGCCCACCAGGACCACCTTaGCGGACCGCACGCCTGGTGGCGCCTCCTCACCCG | + |
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Preference number: 6 (lower is better) Translates to: SSRSRRRPPGPP*RTARLVAPPHP Trigger: CGGGTGAGGAGGCGCCACCAGGCGTGCGGTCCGTCAAGGTGGTCCTGGTGGGCGACGGCGGCTGCGGGAAGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000308831.7 ENST00000532559.1 ENST00000533360.2 |
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| CDS CCA 72 bp | CGACCGCGGCTGCTGAGGGCCACCTCGGCGGCCTCCTaGAAGACGGCGTGGACGTTGTCATGGAGCCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RPRLLRATSAAS*KTAWTLSWSRA Trigger: GGCTCGGCTCCATGACAACGTCCACGCCGTCTTCCAGGAGGCCGCCGAGGTGGCCCTCAGCAGCCGCGGTCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000532559.1 |
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| CDS CCA 72 bp | AGCAGCAGGTCAGCGCCCTGCCCCTTCCCGCGTCGCTaGGACGCCCCGAGCCGCTCAGGTCACCACGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SSRSAPCPFPRR*DAPSRSGHHAK Trigger: TTTTGCGTGGTGACCTGAGCGGCTCGGGGCGTCCCAGCGACGCGGGAAGGGGCAGGGCGCTGACCTGCTGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000532559.1 |
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| CDS CCA 72 bp | CTGAGGGCCACCTCGGCGGCCTCCTGGAAGACGGCGTaGACGTTGTCATGGAGCCGAGCCGAGCACTCGAGG | + |
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Preference number: 6 (lower is better) Translates to: LRATSAASWKTA*TLSWSRAEHSR Trigger: CCTCGAGTGCTCGGCTCGGCTCCATGACAACGTCCACGCCGTCTTCCAGGAGGCCGCCGAGGTGGCCCTCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000532559.1 |
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| CDS CAA 72 bp | ACCACGCAAAAGCCCTGGGTAATCCGCCGCCAGAAGTaGCGACCGCGGCTGCTGAGGGCCACCTCGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: TTQKPWVIRRQK*RPRLLRATSAA Trigger: GGCCGCCGAGGTGGCCCTCAGCAGCCGCGGTCGCAACTTCTGGCGGCGGATTACCCAGGGCTTTTGCGTGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000532559.1 |
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| CDS CAA 90 bp | GCTCAGGTCACCACGCAAAAGCCCTGGGTAATCCGCCGCCAGAAGTaGCGACCGCGGCTGCTGAGGGCCACCTCGGCGGCCTCCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: AQVTTQKPWVIRRQK*RPRLLRATSAASWK Trigger: CTTCCAGGAGGCCGCCGAGGTGGCCCTCAGCAGCCGCGGTCGCAACTTCTGGCGGCGGATTACCCAGGGCTTTTGCGTGGTGACCTGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000532559.1 |
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| CDS CCA 72 bp | ACGCCCCGAGCCGCTCAGGTCACCACGCAAAAGCCCTaGGTAATCCGCCGCCAGAAGTTGCGACCGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TPRAAQVTTQKP*VIRRQKLRPRL Trigger: CAGCCGCGGTCGCAACTTCTGGCGGCGGATTACCCAGGGCTTTTGCGTGGTGACCTGAGCGGCTCGGGGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000532559.1 |
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| CDS CAA 90 bp | CCCTGCTGTGTCCCAGATGTGGAGGTGCACAGGTTTGCCTTTCACTaGCAGGTTGACCATGTACCGCTCAAACACCGTGGGGGTGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: PCCVPDVEVHRFAFH*QVDHVPLKHRGGVA Trigger: AGCTACACCCCCACGGTGTTTGAGCGGTACATGGTCAACCTGCAAGTGAAAGGCAAACCTGTGCACCTCCACATCTGGGACACAGCAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000533360.2 |
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| CDS TCA 72 bp | GGCCCTCTCAGTGGACCACTCTCTTGCTCCCCAGCCTaGGCTCTGATATGGATAATCAGCAAAGCCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: GPLSGPLSCSPA*ALIWIISKAST Trigger: GGTGCTGGCTTTGCTGATTATCCATATCAGAGCTCAGGCTGGGGAGCAAGAGAGTGGTCCACTGAGAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533360.2 |
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| CDS TCA 72 bp | CAGCCCACGACGATGATGGGTACCTTCTTGCAGAAATaGTTCACTTCTGGGTACCACTCGGGGAAGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: QPTTMMGTFLQK*FTSGYHSGKAP Trigger: TGGGGCCTTCCCCGAGTGGTACCCAGAAGTGAATCATTTCTGCAAGAAGGTACCCATCATCGTCGTGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000532559.1 |
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| CDS CAA 90 bp | GGCTCCAATCCGTTTCTTCGGAGCTTGTTCACCAGTGATTTGTCCTaGCGCAGGTCAGTCTTGCAGCCCACGACGATGATGGGTACCTTC | + |
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Preference number: 6 (lower is better) Translates to: GSNPFLRSLFTSDLS*RRSVLQPTTMMGTF Trigger: GAAGGTACCCATCATCGTCGTGGGCTGCAAGACTGACCTGCGCAAGGACAAATCACTGGTGAACAAGCTCCGAAGAAACGGATTGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000532559.1 |
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| CDS CAA 90 bp | GTCACAGGCTCCAATCCGTTTCTTCGGAGCTTGTTCACCAGTGATTaGTCCTTGCGCAGGTCAGTCTTGCAGCCCACGACGATGATGGGT | + |
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Preference number: 6 (lower is better) Translates to: VTGSNPFLRSLFTSD*SLRRSVLQPTTMMG Trigger: ACCCATCATCGTCGTGGGCTGCAAGACTGACCTGCGCAAGGACAAATCACTGGTGAACAAGCTCCGAAGAAACGGATTGGAGCCTGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000532559.1 |
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| CDS CAA 72 bp | CCGTTTCTTCGGAGCTTGTTCACCAGTGATTTGTCCTaGCGCAGGTCAGTCTTGCAGCCCACGACGATGATG | + |
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Preference number: 6 (lower is better) Translates to: PFLRSLFTSDLS*RRSVLQPTTMM Trigger: CATCATCGTCGTGGGCTGCAAGACTGACCTGCGCAAGGACAAATCACTGGTGAACAAGCTCCGAAGAAACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000532559.1 |
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| CDS CAA 72 bp | TCCAATCCGTTTCTTCGGAGCTTGTTCACCAGTGATTaGTCCTTGCGCAGGTCAGTCTTGCAGCCCACGACG | + |
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Preference number: 6 (lower is better) Translates to: SNPFLRSLFTSD*SLRRSVLQPTT Trigger: CGTCGTGGGCTGCAAGACTGACCTGCGCAAGGACAAATCACTGGTGAACAAGCTCCGAAGAAACGGATTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000532559.1 |
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| CDS CAA 72 bp | TTGTTCACCAGTGATTTGTCCTTGCGCAGGTCAGTCTaGCAGCCCACGACGATGATGGGTACCTTCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LFTSDLSLRRSV*QPTTMMGTFLQ Trigger: CTGCAAGAAGGTACCCATCATCGTCGTGGGCTGCAAGACTGACCTGCGCAAGGACAAATCACTGGTGAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308831.7 ENST00000532559.1 |
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| CDS CAA 90 bp | GATAATCAGCAAAGCCAGCACCTAGGGAGAAACCGGTTAAAGATGTaGTCAAAGCTGTTCGGGCTGGTGACATCGAAGCAAAGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: DNQQSQHLGRNRLKM*SKLFGLVTSKQSSR Trigger: CCTGCTGCTTTGCTTCGATGTCACCAGCCCGAACAGCTTTGACAACATCTTTAACCGGTTTCTCCCTAGGTGCTGGCTTTGCTGATTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533360.2 |
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| CDS TCA 72 bp | CAGCCCACGACGATGATGGGTACCTTCTTGCAGAAATaGTTCACTTCTGGGTACCACCGGTTAAAGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: QPTTMMGTFLQK*FTSGYHRLKML Trigger: CAACATCTTTAACCGGTGGTACCCAGAAGTGAATCATTTCTGCAAGAAGGTACCCATCATCGTCGTGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308831.7 |
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