RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RHOBTB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000164292

Ensembl transcript IDs: ENST00000379982.8, ENST00000502541.1, ENST00000503737.1, ENST00000504179.5, ENST00000504949.1, ENST00000506817.1, ENST00000506959.5, ENST00000507186.1, ENST00000510226.5, ENST00000510313.1, ENST00000510623.1, ENST00000511558.1, ENST00000512878.1, ENST00000513091.1, ENST00000514198.1, ENST00000515852.5

Found 330 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTTGGAGGGAAGTGGGAAGTGGGAAGTCCGGAGCCCTGACCACGTaGGGGGCCTCCCAGCCCTGCCACATCCTTTTCTCTGGACAGAGC +
Preference number: 1 (lower is better)
Translates to: LWREVGSGKSGALTT*GASQPCHILFSGQS
Trigger: GCTCTGTCCAGAGAAAAGGATGTGGCAGGGCTGGGAGGCCCCTCACGTGGTCAGGGCTCCGGACTTCCCACTTCCCACTTCCCTCCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513091.1
3UTR CCA 90 bp CACAACACATTTCTCCCTTGCCAGCCAAGGTGGCAGTGGAGGCCCTaGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTATGTTC +
Preference number: 1 (lower is better)
Translates to: HNTFLPCQPRWQWRP*VVQTSPKAGIFTMF
Trigger: GAACATAGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGCAAGGGAGAAATGTGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
3UTR CCA 90 bp CTAAGACAACACAACACATTTCTCCCTTGCCAGCCAAGGTGGCAGTaGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTC +
Preference number: 1 (lower is better)
Translates to: LRQHNTFLPCQPRWQ*RPWVVQTSPKAGIF
Trigger: GAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGCAAGGGAGAAATGTGTTGTGTTGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
3UTR CCA 90 bp ACACATTTCTCCCTTGCCAGCCAAGGTGGCAGTGGAGGCCCTGGGTaGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTATGTTCTCTT +
Preference number: 1 (lower is better)
Translates to: THFSLASQGGSGGPG*SRPPQRRESSLCSL
Trigger: AAGAGAACATAGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGCAAGGGAGAAATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
3UTR CCA 90 bp TTAAAGCTAAGACAACACAACACATTTCTCCCTTGCCAGCCAAGGTaGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGA +
Preference number: 1 (lower is better)
Translates to: LKLRQHNTFLPCQPR*QWRPWVVQTSPKAG
Trigger: TCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGCAAGGGAGAAATGTGTTGTGTTGTCTTAGCTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
3UTR TCA 90 bp GCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCCACAGTCGTaGAGTGTACCAGTAAGTGCTCCACATTCCCACTGGGGCCTTCTA +
Preference number: 1 (lower is better)
Translates to: AHSTVCCLPRVNPQS*SVPVSAPHSHWGLL
Trigger: TAGAAGGCCCCAGTGGGAATGTGGAGCACTTACTGGTACACTTCACGACTGTGGGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
3UTR CCA 90 bp CAGCGCAGAGAACGATCTTGTGGGCCTCTACAACTTTCTTTAAATTaGGGTTGTAAAATACCACGTCCACACACTGGCAGCAGAACAGCA +
Preference number: 1 (lower is better)
Translates to: QRRERSCGPLQLSLN*GCKIPRPHTGSRTA
Trigger: TGCTGTTCTGCTGCCAGTGTGTGGACGTGGTATTTTACAACCCCAATTTAAAGAAAGTTGTAGAGGCCCACAAGATCGTTCTCTGCGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502541.1
3UTR CCA 90 bp GCGTCTTTAACAATGACTCGTAATGGTGGGTTGCCTGAAGATTCATaGCTAGCACCTGGAAATGCAGTATCTCTGTTTATAGCAAAAAGA +
Preference number: 1 (lower is better)
Translates to: ASLTMTRNGGLPEDS*LAPGNAVSLFIAKR
Trigger: TCTTTTTGCTATAAACAGAGATACTGCATTTCCAGGTGCTAGCCATGAATCTTCAGGCAACCCACCATTACGAGTCATTGTTAAAGACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502541.1
3UTR TCA 90 bp TCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCAGTaGAAAGTATTTTTGCCTGTGTTGAGCTTTGAGAGGGATGTATTT +
Preference number: 1 (lower is better)
Translates to: SFPPLSRGTISELSQ*KVFLPVLSFERDVF
Trigger: AAATACATCCCTCTCAAAGCTCAACACAGGCAAAAATACTTTTCACTGGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506817.1
3UTR CCA 90 bp CACGAAACAGACATAATTTTGAGGGCTCAGCACAAAATGAAATCATaGGGCCCTTCTTCAAACATTATTAAGAATTTCCGCTATAGCAGA +
Preference number: 1 (lower is better)
Translates to: HETDIILRAQHKMKS*GPSSNIIKNFRYSR
Trigger: TCTGCTATAGCGGAAATTCTTAATAATGTTTGAAGAAGGGCCCCATGATTTCATTTTGTGCTGAGCCCTCAAAATTATGTCTGTTTCGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR-3UTR TCA 90 bp TTAAGGCAACAGCCTGAGGGCCCTGAAACAGACCCTGGACCTCCTGGCAGGGGCGGAAGTCCGGAGCCCTaGCCACGTGAGGGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: LRQQPEGPETDPGPPGRGGSPEP*PREGPP
Trigger: GGGAGGCCCCTCACGTGGTCAGGGCTCCGGACTTCC...GCCCCTGCCAGGAGGTCCAGGGTCTGTTTCAGGGCCCTCAGGCTGTTGCCTTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513091.1
3UTR-3UTR CCA 90 bp CAGGTGCAAGTCGTGTGGATAAACCTCAGGCTGAGGGAACTTAAGGCAACAGCCGAGGGAAGTGGGAAGTaGGAAGTCCGGAGCCCTGAC +
Preference number: 2 (lower is better)
Translates to: QVQVVWINLRLRELKATAEGSGK*EVRSPD
Trigger: GTCAGGGCTCCGGACTTCCCACTTCCCACTTCCCTC...GGCTGTTGCCTTAAGTTCCCTCAGCCTGAGGTTTATCCACACGACTTGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513091.1
3UTR-3UTR GCA 90 bp TGTCTGCTGCCTACCAAGGGTCAACCCACAGTCGTGAAGTGTACCAGTAAGTGCGACAGGGCTGTTCCCTaGCCAGTGAAACAAAGGACC +
Preference number: 2 (lower is better)
Translates to: CLLPTKGQPTVVKCTSKCDRAVP*PVKQRT
Trigger: GGTCCTTTGTTTCACTGGGCAGGGAACAGCCCTGTC...GCACTTACTGGTACACTTCACGACTGTGGGTTGACCCTTGGTAGGCAGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506817.1
3UTR-3UTR GCA 90 bp CCCGTCCCTTGGAGTTGGCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCAAGTGTACCAGTAAGTaGTCCACATTCCCACTGGGG +
Preference number: 2 (lower is better)
Translates to: PVPWSWHIQLSAAYQGSTKCTSK*STFPLG
Trigger: CCCCAGTGGGAATGTGGAGCACTTACTGGTACACTT...GGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGCCAACTCCAAGGGACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506817.1
3UTR-3UTR CCA 90 bp CAGGTGCAAGTCGTGTGGATAAACCTCAGGCTGAGGGAACTTAAGGCAACAGCCTGGCAGAGCCTACTTTaGAGGGAAGTGGGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: QVQVVWINLRLRELKATAWQSLL*REVGSG
Trigger: CCCACTTCCCACTTCCCTCCAAAGTAGGCTCTGCCA...GGCTGTTGCCTTAAGTTCCCTCAGCCTGAGGTTTATCCACACGACTTGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513091.1
3UTR CAA 90 bp AACTGTGACTGTTTTAAAGCTAAGACAACACAACACATTTCTCCCTaGCCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTC +
Preference number: 2 (lower is better)
Translates to: NCDCFKAKTTQHISP*PAKVAVEALGGPDL
Trigger: GAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGCAAGGGAGAAATGTGTTGTGTTGTCTTAGCTTTAAAACAGTCACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
3UTR-3UTR TCA 90 bp CCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCAGTGAACCTAAGAGTGTTCTCTaGCAGGGCTGTTCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: PCLFLRFPEELFLNCPSEPKSVL*QGCSLP
Trigger: GGGCAGGGAACAGCCCTGTCAGAGAACACTCTTAGG...TTCACTGGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
3UTR-3UTR TCA 90 bp CTAGCTCTGGAGAGCTGTGACATCTGGATGTTGGTGTCACTCACACAGGTAGGTGGGCTCAGCACAAAATaGAATCATGGGGCCCTTCTT +
Preference number: 2 (lower is better)
Translates to: LALESCDIWMLVSLTQVGGLSTK*NHGALL
Trigger: AAGAAGGGCCCCATGATTTCATTTTGTGCTGAGCCC...ACCTACCTGTGTGAGTGACACCAACATCCAGATGTCACAGCTCTCCAGAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR-3UTR CCA 90 bp CAGTCCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCAGCCCGTCCCTTGGAGTTaGCACATTCAACTGTCTGCT +
Preference number: 2 (lower is better)
Translates to: QSLSFPPLSRGTISELSQPVPWS*HIQLSA
Trigger: AGCAGACAGTTGAATGTGCCAACTCCAAGGGACGGG...CTGGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
3UTR-3UTR CCA 90 bp ATGACTCGTAATGGTGGGTTGCCTGAAGATTCATGGCTAGCACCTGGAAATGCAACCACGTCCACACACTaGCAGCAGAACAGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: MTRNGGLPEDSWLAPGNATTSTH*QQNSKL
Trigger: TAACTTGCTGTTCTGCTGCCAGTGTGTGGACGTGGT...TGCATTTCCAGGTGCTAGCCATGAATCTTCAGGCAACCCACCATTACGAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502541.1
3UTR-3UTR GCA 90 bp CCACACCAACTGGGCACCAGCTTCCAAACCCAACTCCACTTCAGGTCAAACAACATCAGTGCCTTTTTCTaGTTTCAGAGAGAAAGGTGT +
Preference number: 2 (lower is better)
Translates to: PHQLGTSFQTQLHFRSNNISAFF*FQRERC
Trigger: ACACCTTTCTCTCTGAAAGCAGAAAAAGGCACTGAT...GTTGTTTGACCTGAAGTGGAGTTGGGTTTGGAAGCTGGTGCCCAGTTGGTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR-3UTR CCA 90 bp AAGACAACACAACACATTTCTCCCTTGCCAGCCAAGGTGGCAGTGGAGGCCCTGAATTTTACTGGAACCTaGAGGTATCCCATTCTTCAT +
Preference number: 2 (lower is better)
Translates to: KTTQHISPLPAKVAVEALNFTGT*RYPILH
Trigger: ATGAAGAATGGGATACCTCCAGGTTCCAGTAAAATT...CAGGGCCTCCACTGCCACCTTGGCTGGCAAGGGAGAAATGTGTTGTGTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR-3UTR CCA 90 bp ATATACAAAGGGTTAAATAGGGTAAAGACTTTGGCCAAGAAAGGAAAGGCCTTAAGTGGAGGCCCTGGGTaGTCCAGACCTCCCCAAAGG +
Preference number: 2 (lower is better)
Translates to: IYKGLNRVKTLAKKGKALSGGPG*SRPPQR
Trigger: CCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACT...TAAGGCCTTTCCTTTCTTGGCCAAAGTCTTTACCCTATTTAACCCTTTGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR CAA 90 bp CAAGAACAGAAGAGGGCGTCTTTAACAATGACTCGTAATGGTGGGTaGCCTGAAGATTCATGGCTAGCACCTGGAAATGCAGTATCTCTG +
Preference number: 2 (lower is better)
Translates to: QEQKRASLTMTRNGG*PEDSWLAPGNAVSL
Trigger: CAGAGATACTGCATTTCCAGGTGCTAGCCATGAATCTTCAGGCAACCCACCATTACGAGTCATTGTTAAAGACGCCCTCTTCTGTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502541.1
3UTR-3UTR TCA 90 bp ACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTCGACATTTCCGGGAGTaGATATACTTCCTGTATTCC +
Preference number: 2 (lower is better)
Translates to: THIGFGQKNFTGTWRYPIRHFRE*IYFLYS
Trigger: GGAATACAGGAAGTATATTCACTCCCGGAAATGTCG...AATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514198.1
3UTR-3UTR CCA 90 bp TTAACAATGACTCGTAATGGTGGGTTGCCTGAAGATTCATGGCTAGCACCTGGACAGAGAACGATCTTGTaGGCCTCTACAACTTTCTTT +
Preference number: 2 (lower is better)
Translates to: LTMTRNGGLPEDSWLAPGQRTIL*ASTTFF
Trigger: AAAGAAAGTTGTAGAGGCCCACAAGATCGTTCTCTG...TCCAGGTGCTAGCCATGAATCTTCAGGCAACCCACCATTACGAGTCATTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502541.1
3UTR-3UTR TCA 90 bp CCCTATAATATGAACAGTGAGCAGTCAGAAATATACAAAGGGTTAAATAGGGTAAGCTCTGGAGAGCTGTaGCATCTGGATGTTGGTGTC +
Preference number: 2 (lower is better)
Translates to: PYNMNSEQSEIYKGLNRVSSGEL*HLDVGV
Trigger: GACACCAACATCCAGATGTCACAGCTCTCCAGAGCT...TACCCTATTTAACCCTTTGTATATTTCTGACTGCTCACTGTTCATATTATAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR-3UTR CCA 90 bp AATGCAGTATCTCTGTTTATAGCAAAAAGATCCTGGGTAGTTCGGATGATACTGAGCAGCATGAAAACATaGCTTACAGCGCAGAGAACG +
Preference number: 2 (lower is better)
Translates to: NAVSLFIAKRSWVVRMILSSMKT*LTAQRT
Trigger: CGTTCTCTGCGCTGTAAGCCATGTTTTCATGCTGCT...CAGTATCATCCGAACTACCCAGGATCTTTTTGCTATAAACAGAGATACTGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502541.1
3UTR-3UTR CCA 90 bp ATTTCCCACCACGAAACAGACATAATTTTGAGGGCTCAGCACAAAATGAAATCATCATGTTGGACTGATTaGTTTTCCCCTAGATTTCTC +
Preference number: 2 (lower is better)
Translates to: ISHHETDIILRAQHKMKSSCWTD*FSPRFL
Trigger: GAGAAATCTAGGGGAAAACCAATCAGTCCAACATGA...TGATTTCATTTTGTGCTGAGCCCTCAAAATTATGTCTGTTTCGTGGTGGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR-3UTR CCA 90 bp GGTAATTTTTCTAACACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCAATTTTACTGGAACCTaGAGGTATCCCATTCTTCAT +
Preference number: 2 (lower is better)
Translates to: GNFSNTHIGFGQKNFTGTNFTGT*RYPILH
Trigger: ATGAAGAATGGGATACCTCCAGGTTCCAGTAAAATT...GGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAAAATTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000514198.1
3UTR CAA 90 bp TTGCAGTTGAAAAGTTTAGCTGTCTTGGAAGTCAAATTTATCCAATaGTTCAGACTTCTGTTACTACTTAATATGAAGCCACCATGCTGG +
Preference number: 2 (lower is better)
Translates to: LQLKSLAVLEVKFIQ*FRLLLLLNMKPPCW
Trigger: CCAGCATGGTGGCTTCATATTAAGTAGTAACAGAAGTCTGAACAATTGGATAAATTTGACTTCCAAGACAGCTAAACTTTTCAACTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR CAA 90 bp CTAATAAACATATTAAGCTATATGGTAATTTTTCTAACACCCACATaGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCA +
Preference number: 2 (lower is better)
Translates to: LINILSYMVIFLTPT*VSVRRILLEPGGIP
Trigger: TGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAAAATTACCATATAGCTTAATATGTTTATTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000514198.1
3UTR CCA 72 bp TTTCTCCCTTGCCAGCCAAGGTGGCAGTGGAGGCCCTaGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTC +
Preference number: 3 (lower is better)
Translates to: FLPCQPRWQWRP*VVQTSPKAGIF
Trigger: GAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGCAAGGGAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
3UTR CCA 72 bp AGAGAGGAGGCTCAGACTCTGTGGCAGAGCCTACTTTaGAGGGAAGTGGGAAGTGGGAAGTCCGGAGCCCTG +
Preference number: 3 (lower is better)
Translates to: REEAQTLWQSLL*REVGSGKSGAL
Trigger: CAGGGCTCCGGACTTCCCACTTCCCACTTCCCTCCAAAGTAGGCTCTGCCACAGAGTCTGAGCCTCCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513091.1
3UTR-3UTR CAA 90 bp CCCAGTCCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCCCCCGTCCCTTGGAGTaGGCACATTCAACTGTCTGC +
Preference number: 3 (lower is better)
Translates to: PSPCLFLRFPEELFLNCPPRPLE*AHSTVC
Trigger: GCAGACAGTTGAATGTGCCAACTCCAAGGGACGGGG...GGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGGACTGGG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000506817.1
3UTR TCA 72 bp CCCACTGGGGCCTTCTATCTTCCTAAGAGTGTTCTCTaGCAGGGCTGTTCCCTGCCCAGTGAAACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: PTGAFYLPKSVL*QGCSLPSETKD
Trigger: GTCCTTTGTTTCACTGGGCAGGGAACAGCCCTGTCAGAGAACACTCTTAGGAAGATAGAAGGCCCCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
3UTR TCA 72 bp ACTGTCTGCTGCCTACCAAGGGTCAACCCACAGTCGTaGAGTGTACCAGTAAGTGCTCCACATTCCCACTGG +
Preference number: 3 (lower is better)
Translates to: TVCCLPRVNPQS*SVPVSAPHSHW
Trigger: CCAGTGGGAATGTGGAGCACTTACTGGTACACTTCACGACTGTGGGTTGACCCTTGGTAGGCAGCAGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506817.1
3UTR GCA 72 bp AAGGGTCAACCCACAGTCGTGAAGTGTACCAGTAAGTaGTCCACATTCCCACTGGGGCCTTCTATCTTCCTA +
Preference number: 3 (lower is better)
Translates to: KGQPTVVKCTSK*STFPLGPSIFL
Trigger: TAGGAAGATAGAAGGCCCCAGTGGGAATGTGGAGCACTTACTGGTACACTTCACGACTGTGGGTTGACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
3UTR CCA 72 bp AAGAATTTCCGCTATAGCAGAGCCTTGAACCAAGTGTaGGGTCCTTCTAAGTGTGGGCCCTGTGCTGCTACA +
Preference number: 3 (lower is better)
Translates to: KNFRYSRALNQV*GPSKCGPCAAT
Trigger: TGTAGCAGCACAGGGCCCACACTTAGAAGGACCCCACACTTGGTTCAAGGCTCTGCTATAGCGGAAATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR CCA 72 bp GTGGGACTCTTCACATTGAAAAGCAGCATGAAAACATaGCTTACAGCGCAGAGAACGATCTTGTGGGCCTCT +
Preference number: 3 (lower is better)
Translates to: VGLFTLKSSMKT*LTAQRTILWAS
Trigger: AGAGGCCCACAAGATCGTTCTCTGCGCTGTAAGCCATGTTTTCATGCTGCTTTTCAATGTGAAGAGTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502541.1
3UTR CCA 72 bp GAACGATCTTGTGGGCCTCTACAACTTTCTTTAAATTaGGGTTGTAAAATACCACGTCCACACACTGGCAGC +
Preference number: 3 (lower is better)
Translates to: ERSCGPLQLSLN*GCKIPRPHTGS
Trigger: GCTGCCAGTGTGTGGACGTGGTATTTTACAACCCCAATTTAAAGAAAGTTGTAGAGGCCCACAAGATCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502541.1
3UTR TCA 72 bp CCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCAGTaGAAAGTATTTTTGCCTGTGTTGAGCTTTGAGAGG +
Preference number: 3 (lower is better)
Translates to: PLSRGTISELSQ*KVFLPVLSFER
Trigger: CCTCTCAAAGCTCAACACAGGCAAAAATACTTTTCACTGGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506817.1
3UTR GCA 72 bp ATCTTCCTAAGAGTGTTCTCTGACAGGGCTGTTCCCTaGCCAGTGAAACAAAGGACCAAAGATTTTCTCAAA +
Preference number: 3 (lower is better)
Translates to: IFLRVFSDRAVP*PVKQRTKDFLK
Trigger: TTTGAGAAAATCTTTGGTCCTTTGTTTCACTGGGCAGGGAACAGCCCTGTCAGAGAACACTCTTAGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
3UTR-3UTR CAA 90 bp TTGTTCAGACTTCTGTTACTACTTAATATGAAGCCACCATGCTGGCTTGGACAGTTTCTAACACCCACATaGGTTTCGGTCAGAAGAATT +
Preference number: 3 (lower is better)
Translates to: LFRLLLLLNMKPPCWLGQFLTPT*VSVRRI
Trigger: AATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAA...CTGTCCAAGCCAGCATGGTGGCTTCATATTAAGTAGTAACAGAAGTCTGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR-3UTR CAA 90 bp AAGCATTTCTTAACTGAGAGGGGTCTAAATATCACTAAAGCAACAGGACATCTTAGCTGCAAAACAGCTTaGCATTCTAGAGTGAAAGCC +
Preference number: 3 (lower is better)
Translates to: KHFLTERGLNITKATGHLSCKTA*HSRVKA
Trigger: GGCTTTCACTCTAGAATGCAAAGCTGTTTTGCAGCT...AAGATGTCCTGTTGCTTTAGTGATATTTAGACCCCTCTCAGTTAAGAAATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000514198.1
3UTR CCA 72 bp GACATAATTTTGAGGGCTCAGCACAAAATGAAATCATaGGGCCCTTCTTCAAACATTATTAAGAATTTCCGC +
Preference number: 3 (lower is better)
Translates to: DIILRAQHKMKS*GPSSNIIKNFR
Trigger: GCGGAAATTCTTAATAATGTTTGAAGAAGGGCCCCATGATTTCATTTTGTGCTGAGCCCTCAAAATTATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR-3UTR CAA 90 bp AACCTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATAGAGGATAAAGTGGCTCAATaGGGTTGTCCAGATGAAAAG +
Preference number: 3 (lower is better)
Translates to: NLLVLQNDQESICSSMIEDKVAQ*GCPDEK
Trigger: CTTTTCATCTGGACAACCCAATTGAGCCACTTTATC...CTCTATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR TCA 72 bp GAACTAAGATATCACTTTTCACAACCAAATGTCACCTaGGGACACATTTTGTCACCTTATCTATTTCAGGGA +
Preference number: 3 (lower is better)
Translates to: ELRYHFSQPNVT*GHILSPYLFQG
Trigger: TCCCTGAAATAGATAAGGTGACAAAATGTGTCCTCAGGTGACATTTGGTTGTGAAAAGTGATATCTTAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CCA 90 bp CCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCCAGCCAAGGTGGCAGTaGAGGCCCTGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PRWQWRPWVVQTSPKAGIQPRWQ*RPWVVQ
Trigger: CTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTG...GATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR GCA 90 bp CCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGACATGGCCTGGAATATaGCAGCTGGGCAGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PAKVAVEALGGPDLPKGGTWPGI*QLGSRS
Trigger: ACTCCTGCTGCCCAGCTGGCATATTCCAGGCCATGT...CCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTGACGGCCGGTTGTCCTaGTGGAATGTGTCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: QGGSGGPGWSRPPQRRESDGRLS*WNVSPS
Trigger: CGAGGGGGACACATTCCACCAGGACAACCGGCCGTC...AGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp AAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTTGGCAGTGGAGGCCCTaGGTGGTCCAGACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: KVAVEALGGPDLPKGGNLWQWRP*VVQTSP
Trigger: TGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCA...AAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR GCA 90 bp CAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGATGGATGCCAGTTCCCTaGTTGGCATGCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QPRWQWRPWVVQTSPKAGWMPVP*LACSAA
Trigger: AGCTGCAGAGCATGCCAAGCAGGGAACTGGCATCCA...TCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CCA 90 bp CCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTGCCAGTTCCCTGCTTaGCATGCTCTGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PRWQWRPWVVQTSPKAGICQFPA*HALQLG
Trigger: ACCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCA...GATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CCA 90 bp TTAAGGCAACAGCCTGAGGGCCCTGAAACAGACCCTGGACCTCCTGGCAGGGGCCGTGGTGTCCAGCTCTaGCCTTGGCCCCGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LRQQPEGPETDPGPPGRGRGVQL*PWPRLF
Trigger: AAAGAGGCGGGGCCAAGGCCAGAGCTGGACACCACG...GCCCCTGCCAGGAGGTCCAGGGTCTGTTTCAGGGCCCTCAGGCTGTTGCCTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR GCA 90 bp CCCGTCCCTTGGAGTTGGCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCCCGCTACTCAGGGAGTaGCCGGGAACATCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PVPWSWHIQLSAAYQGSTPLLRE*PGTSPG
Trigger: GCCCGGCGATGTTCCCGGGCACTCCCTGAGTAGCGG...GGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGCCAACTCCAAGGGACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR GCA 90 bp AGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTATGTTCTCTCCGGACGCGCGACCGTaGTGGCCGCGTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: RPWVVQTSPKAGIFTMFSPDARP*WPRSAT
Trigger: TGTTGCTGAACGCGGCCAGCACGGTCGCGCGTCCGG...AGAGAACATAGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR GCA 90 bp GCCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGAGCTCACAGATGTGCTaGAGTCTGGACACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: ASQGGSGGPGWSRPPQRRSSQMC*SLDTWY
Trigger: GTACCAAGTGTCCAGACTGCAGCACATCTGTGAGCT...CCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CCA 90 bp GCCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGCTGTTTTGGCCAGGCTaGTTTCGAACTCATGACCTC +
Preference number: 4 (lower is better)
Translates to: ASQGGSGGPGWSRPPQRRLFWPG*FRTHDL
Trigger: GAGGTCATGAGTTCGAAACCAGCCTGGCCAAAACAG...CCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp TTAAGGCAACAGCCTGAGGGCCCTGAAACAGACCCTGGACCTCCTGGCAGGGGCGAGGGAAGTGGGAAGTaGGAAGTCCGGAGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LRQQPEGPETDPGPPGRGEGSGK*EVRSPD
Trigger: GTCAGGGCTCCGGACTTCCCACTTCCCACTTCCCTC...GCCCCTGCCAGGAGGTCCAGGGTCTGTTTCAGGGCCCTCAGGCTGTTGCCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR GCA 90 bp GCCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGACCATTAAACATGGCTaGCATCACTTCACAACGGGC +
Preference number: 4 (lower is better)
Translates to: ASQGGSGGPGWSRPPQRRTIKHG*HHFTTG
Trigger: GCCCGTTGTGAAGTGATGGCAGCCATGTTTAATGGT...CCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp AGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTATGTTCTCTGACGCGCGACCGTGCTaGCCGCGTTCAGCAACAAGC +
Preference number: 4 (lower is better)
Translates to: RPWVVQTSPKAGIFTMFSDARPC*PRSATS
Trigger: GCTTGTTGCTGAACGCGGCCAGCACGGTCGCGCGTC...AGAGAACATAGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGATGCAGTCTGGACACTTaGTACATCTCGGCACAGATC +
Preference number: 4 (lower is better)
Translates to: QPRWQWRPWVVQTSPKAGCSLDT*YISAQI
Trigger: GATCTGTGCCGAGATGTACCAAGTGTCCAGACTGCA...TCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CCTTGGAGTTGGCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCCACAGTCCCCGGGAGCTCCGGTaGCGGCGGCTGGACACAAAG +
Preference number: 4 (lower is better)
Translates to: PWSWHIQLSAAYQGSTHSPRELR*RRLDTK
Trigger: CTTTGTGTCCAGCCGCCGCCACCGGAGCTCCCGGGG...ACTGTGGGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGCCAACTCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CCA 90 bp TTAAGGCAACAGCCTGAGGGCCCTGAAACAGACCCTGGACCTCCTGGCAGGGGCGTCCAGCTCTGGCCTTaGCCCCGCCTCTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LRQQPEGPETDPGPPGRGVQLWP*PRLFED
Trigger: ATCTTCAAAGAGGCGGGGCCAAGGCCAGAGCTGGAC...GCCCCTGCCAGGAGGTCCAGGGTCTGTTTCAGGGCCCTCAGGCTGTTGCCTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR CCA 90 bp CAGCCCTGCCACATCCTTTTCTCTGGACAGAGCTGTCACTTAGCTCCCCCTCCGAGACCCTGGACCTCCTaGCAGGGGCCTCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QPCHILFSGQSCHLAPPPRPWTS*QGPLEG
Trigger: TCCTTCCAGAGGCCCCTGCCAGGAGGTCCAGGGTCT...CGGAGGGGGAGCTAAGTGACAGCTCTGTCCAGAGAAAAGGATGTGGCAGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR TCA 90 bp CCACACCAACTGGGCACCAGCTTCCAAACCCAACTCCACTTCAGGTCAAACAACCCAAGTGGACGCAGCTaGCCGCAGTCCCCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: PHQLGTSFQTQLHFRSNNPSGRS*PQSPLR
Trigger: GCGGAGAGGGGACTGCGGTCAGCTGCGTCCACTTGG...GTTGTTTGACCTGAAGTGGAGTTGGGTTTGGAAGCTGGTGCCCAGTTGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp TGTCTGCTGCCTACCAAGGGTCAACCCACAGTCGTGAAGTGTACCAGTAAGTGCCCAAGTGGACGCAGCTaGCCGCAGTCCCCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: CLLPTKGQPTVVKCTSKCPSGRS*PQSPLR
Trigger: GCGGAGAGGGGACTGCGGTCAGCTGCGTCCACTTGG...GCACTTACTGGTACACTTCACGACTGTGGGTTGACCCTTGGTAGGCAGCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR GCA 90 bp AAGACAACACAACACATTTCTCCCTTGCCAGCCAAGGTGGCAGTGGAGGCCCTGGGGCGGGGGATAAGCTaGCGCTACTCAGGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: KTTQHISPLPAKVAVEALGRGIS*RYSGSA
Trigger: GGCACTCCCTGAGTAGCGGCAGCTTATCCCCCGCCC...CAGGGCCTCCACTGCCACCTTGGCTGGCAAGGGAGAAATGTGTTGTGTTGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR GCA 90 bp CCCTTGGAGTTGGCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCCACAGGGGCGGGGGATAAGCTaGCGCTACTCAGGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: PLELAHSTVCCLPRVNPQGRGIS*RYSGSA
Trigger: GGCACTCCCTGAGTAGCGGCAGCTTATCCCCCGCCC...CTGTGGGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGCCAACTCCAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CCA 90 bp CCCTTGGAGTTGGCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCCACAGCCGCACAGCCCCAAGTaGACGCAGCTGACCGCAGTC +
Preference number: 4 (lower is better)
Translates to: PLELAHSTVCCLPRVNPQPHSPK*TQLTAV
Trigger: GACTGCGGTCAGCTGCGTCCACTTGGGGCTGTGCGG...CTGTGGGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGCCAACTCCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CCA 90 bp AGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTATGTTCTCTAGTGGAGGCCCTGGGTaGTCCAGACCTCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RPWVVQTSPKAGIFTMFSSGGPG*SRPPQR
Trigger: CCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACT...AGAGAACATAGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CCA 90 bp TTAAGGCAACAGCCTGAGGGCCCTGAAACAGACCCTGGACCTCCTGGCAGGGGCTGGCAGAGCCTACTTTaGAGGGAAGTGGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LRQQPEGPETDPGPPGRGWQSLL*REVGSG
Trigger: CCCACTTCCCACTTCCCTCCAAAGTAGGCTCTGCCA...GCCCCTGCCAGGAGGTCCAGGGTCTGTTTCAGGGCCCTCAGGCTGTTGCCTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR TCA 90 bp CAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAACTGCGTTCTTCCACTaGAAGATCCTGAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: QPRWQWRPWVVQTSPKAGTAFFH*KILKFR
Trigger: CCTGAATTTCAGGATCTTTCAGTGGAAGAACGCAGT...TCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR GCA 90 bp CCCGTCCCTTGGAGTTGGCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCTCAGCGCGGAGCAGCTaGTCTTCCTTACCCAGACGG +
Preference number: 4 (lower is better)
Translates to: PVPWSWHIQLSAAYQGSTSARSS*SSLPRR
Trigger: CCGTCTGGGTAAGGAAGAGCAGCTGCTCCGCGCTGA...GGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGCCAACTCCAAGGGACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CCA 90 bp AAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCTGGAATATGCCAGCTaGGCAGCAGGAGTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: KVAVEALGGPDLPKGGNLLEYAS*AAGVCV
Trigger: TACACAGACTCCTGCTGCCCAGCTGGCATATTCCAG...AAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CCTTGCCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGAGAGCTGTGACATCTaGATGTTGGTGTCACTCACA +
Preference number: 4 (lower is better)
Translates to: PCQPRWQWRPWVVQTSPKESCDI*MLVSLT
Trigger: TGTGAGTGACACCAACATCCAGATGTCACAGCTCTC...CTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp GTGAAGTGTACCAGTAAGTGCTCCACATTCCCACTGGGGCCTTCTATCTTCCTATCCGGTGGCGGCGGCTaGACACAAAGGAGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: VKCTSKCSTFPLGPSIFLSGGGG*TQRSRP
Trigger: CGGGCGGCTCCTTTGTGTCCAGCCGCCGCCACCGGA...TAGGAAGATAGAAGGCCCCAGTGGGAATGTGGAGCACTTACTGGTACACTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CCA 90 bp CAGCCCTGCCACATCCTTTTCTCTGGACAGAGCTGTCACTTAGCTCCCCCTCCGCTTACGTGGCAGTCGTaGTGTCCAGCTCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QPCHILFSGQSCHLAPPPLTWQS*CPALAL
Trigger: CAAGGCCAGAGCTGGACACCACGACTGCCACGTAAG...CGGAGGGGGAGCTAAGTGACAGCTCTGTCCAGAGAAAAGGATGTGGCAGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR TCA 90 bp AGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTATGTTCTCTCGTGGACCACCAGCTTaGCATTCCCAAACGCACTGG +
Preference number: 4 (lower is better)
Translates to: RPWVVQTSPKAGIFTMFSRGPPA*HSQTHW
Trigger: CCAGTGCGTTTGGGAATGTCAAGCTGGTGGTCCACG...AGAGAACATAGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp CCTTGCCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGCTGGTTTCGAACTCATaGCCTCAAGTTATCCACTTG +
Preference number: 4 (lower is better)
Translates to: PCQPRWQWRPWVVQTSPKLVSNS*PQVIHL
Trigger: CAAGTGGATAACTTGAGGTCATGAGTTCGAAACCAG...CTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR GCA 90 bp CAGTCCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCAGCCGGACGCGCGACCGTaGTGGCCGCGTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: QSLSFPPLSRGTISELSQPDARP*WPRSAT
Trigger: TGTTGCTGAACGCGGCCAGCACGGTCGCGCGTCCGG...CTGGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR GCA 90 bp AAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTAACAGCTCACAGATGTaGTGCAGTCTGGACACTTGG +
Preference number: 4 (lower is better)
Translates to: KVAVEALGGPDLPKGGNLNSSQM*CSLDTW
Trigger: CCAAGTGTCCAGACTGCAGCACATCTGTGAGCTGTT...AAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR GCA 90 bp CCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCAGTGAAGCTGTCGCCTCCTGCTaGCGCTGCCGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PCLFLRFPEELFLNCPSEAVASC*RCRCSS
Trigger: GGAGGAGCAGCGGCAGCGGCAGCAGGAGGCGACAGC...TTCACTGGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CCA 90 bp CCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTGCCTGAAGATTCATaGCTAGCACCTGGAAATGCA +
Preference number: 4 (lower is better)
Translates to: PRWQWRPWVVQTSPKAGILPEDS*LAPGNA
Trigger: TGCATTTCCAGGTGCTAGCCATGAATCTTCAGGCAA...GATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CAGCCCTGCCACATCCTTTTCTCTGGACAGAGCTGTCACTTAGCTCCCCCTCCGGGGATTCCTCTTACGTaGCAGTCGTGGTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QPCHILFSGQSCHLAPPPGIPLT*QSWCPA
Trigger: AGCTGGACACCACGACTGCCACGTAAGAGGAATCCC...CGGAGGGGGAGCTAAGTGACAGCTCTGTCCAGAGAAAAGGATGTGGCAGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR TCA 90 bp GGAGTTGGCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCCACAGTCGTGCGTGGACCACCAGCTTaGCATTCCCAAACGCACTGG +
Preference number: 4 (lower is better)
Translates to: GVGTFNCLLPTKGQPTVVRGPPA*HSQTHW
Trigger: CCAGTGCGTTTGGGAATGTCAAGCTGGTGGTCCACG...CACGACTGTGGGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGCCAACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR TCA 90 bp CAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTCGACATTTCCGGGAGTaGATATACTTCCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: QGGSGGPGWSRPPQRRESRHFRE*IYFLYS
Trigger: GGAATACAGGAAGTATATTCACTCCCGGAAATGTCG...AGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR TCA 90 bp CAGCCCTGCCACATCCTTTTCTCTGGACAGAGCTGTCACTTAGCTCCCCCTCCGTTAGCTCCCCCTCCGTaGCTCAGAATCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QPCHILFSGQSCHLAPPPLAPPP*LRIWLS
Trigger: AGAAAGCCAGATTCTGAGTCACGGAGGGGGAGCTAA...CGGAGGGGGAGCTAAGTGACAGCTCTGTCCAGAGAAAAGGATGTGGCAGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR GCA 90 bp CCCAGTCCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCTGCTGCCGCTGCCGCTaGTCCTCCTCCTCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: PSPCLFLRFPEELFLNCPCCRCR*SSSSKQ
Trigger: CTGCTTAGAGGAGGAGGAGCAGCGGCAGCGGCAGCA...GGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGGACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR GCA 90 bp CAGGTGCAAGTCGTGTGGATAAACCTCAGGCTGAGGGAACTTAAGGCAACAGCCGGGGCCTCCCAGCCCTaGCACATCCTTTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QVQVVWINLRLRELKATAGASQP*HILFSG
Trigger: TCCAGAGAAAAGGATGTGGCAGGGCTGGGAGGCCCC...GGCTGTTGCCTTAAGTTCCCTCAGCCTGAGGTTTATCCACACGACTTGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR CCA 90 bp CAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTATGAGATGTGCTGCAGTCTaGACACTTGGTACATCTCGG +
Preference number: 4 (lower is better)
Translates to: QWRPWVVQTSPKAGIFTMRCAAV*TLGTSR
Trigger: CCGAGATGTACCAAGTGTCCAGACTGCAGCACATCT...CATAGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGATCATGTTGGACTGATTaGTTTTCCCCTAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: QPRWQWRPWVVQTSPKAGSCWTD*FSPRFL
Trigger: GAGAAATCTAGGGGAAAACCAATCAGTCCAACATGA...TCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CTAGCTCTGGAGAGCTGTGACATCTGGATGTTGGTGTCACTCACACAGGTAGGTAGTGGAGGCCCTGGGTaGTCCAGACCTCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LALESCDIWMLVSLTQVGSGGPG*SRPPQR
Trigger: CCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACT...ACCTACCTGTGTGAGTGACACCAACATCCAGATGTCACAGCTCTCCAGAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGGTATTAAAGTTAGGCTaGTTAGTCACTCTTACCAAC +
Preference number: 4 (lower is better)
Translates to: PAKVAVEALGGPDLPKGGVLKLG*LVTLTN
Trigger: GTTGGTAAGAGTGACTAACCAGCCTAACTTTAATAC...CCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR TCA 90 bp TGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTACTGCGTTCTTCCACTaGAAGATCCTGAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: WQWRPWVVQTSPKAGIFTTAFFH*KILKFR
Trigger: CCTGAATTTCAGGATCTTTCAGTGGAAGAACGCAGT...AGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR GCA 90 bp CCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTCCCGCTACTCAGGGAGTaGCCGGGAACATCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PTLVSVRRILLEPGGIPFPLLRE*PGTSPG
Trigger: GCCCGGCGATGTTCCCGGGCACTCCCTGAGTAGCGG...GAATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR GCA 90 bp CAACACATTTCTCCCTTGCCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCACCCGCCTACTCAGATTaGCAAAAGGAGATAAAGTGG +
Preference number: 4 (lower is better)
Translates to: QHISPLPAKVAVEALGGPPAYSD*QKEIKW
Trigger: CCACTTTATCTCCTTTTGGCAATCTGAGTAGGCGGG...TGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGCAAGGGAGAAATGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCAGTGAAGACGCGCGACCGTGCTaGCCGCGTTCAGCAACAAGC +
Preference number: 4 (lower is better)
Translates to: PCLFLRFPEELFLNCPSEDARPC*PRSATS
Trigger: GCTTGTTGCTGAACGCGGCCAGCACGGTCGCGCGTC...TTCACTGGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CCA 90 bp CCCTTGGAGTTGGCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCCACAGCAGACGGGACAGTCGTaGACCACCAGCTTGACATTC +
Preference number: 4 (lower is better)
Translates to: PLELAHSTVCCLPRVNPQQTGQS*TTSLTF
Trigger: GAATGTCAAGCTGGTGGTCCACGACTGTCCCGTCTG...CTGTGGGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGCCAACTCCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CCA 90 bp TGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTCTATATCAAGGTTCATaGATGCCAGTTCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: WQWRPWVVQTSPKAGIFTLYQGS*MPVPCL
Trigger: CAAGCAGGGAACTGGCATCCATGAACCTTGATATAG...AGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR TCA 90 bp CCCAGTCCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCCCAAACGCACTGGCCTaGTACTCGGTGAACACCGGA +
Preference number: 4 (lower is better)
Translates to: PSPCLFLRFPEELFLNCPPNALA*YSVNTG
Trigger: TCCGGTGTTCACCGAGTATCAGGCCAGTGCGTTTGG...GGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGGACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR TCA 90 bp TGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTTGGTCCCCTATAATATaGACAGTGAGCAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: WQWRPWVVQTSPKAGIFTWSPII*TVSSQK
Trigger: TTTCTGACTGCTCACTGTTCATATTATAGGGGACCA...AGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp CAGCCCTGCCACATCCTTTTCTCTGGACAGAGCTGTCACTTAGCTCCCCCTCCGTTTCTTCCCTTCCCTTaGTCGCAGTATGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: QPCHILFSGQSCHLAPPPFLPFP*SQYAWD
Trigger: ATCCCAAGCATACTGCGATCAAGGGAAGGGAAGAAA...CGGAGGGGGAGCTAAGTGACAGCTCTGTCCAGAGAAAAGGATGTGGCAGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR GCA 90 bp CCTTGCCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGTTGTCAAATGGGATTTaGCAGTGGTTGATTAACTCA +
Preference number: 4 (lower is better)
Translates to: PCQPRWQWRPWVVQTSPKLSNGI*QWLINS
Trigger: TGAGTTAATCAACCACTGGCAAATCCCATTTGACAA...CTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR GCA 90 bp CCAGCCCTGCCACATCCTTTTCTCTGGACAGAGCTGTCACTTAGCTCCCCCTCCCCCTTGATCGCAGTATaGTTGGGATTCCTCTTACGT +
Preference number: 4 (lower is better)
Translates to: PALPHPFLWTELSLSSPSPLIAV*LGFLLR
Trigger: ACGTAAGAGGAATCCCAAGCATACTGCGATCAAGGG...GGAGGGGGAGCTAAGTGACAGCTCTGTCCAGAGAAAAGGATGTGGCAGGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR CCA 90 bp GTGAAGTGTACCAGTAAGTGCTCCACATTCCCACTGGGGCCTTCTATCTTCCTAGGCCGGTTGTCCTGGTaGAATGTGTCCCCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: VKCTSKCSTFPLGPSIFLGRLSW*NVSPSF
Trigger: GAACGAGGGGGACACATTCCACCAGGACAACCGGCC...TAGGAAGATAGAAGGCCCCAGTGGGAATGTGGAGCACTTACTGGTACACTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CCA 90 bp CCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCAATGGGATTTGCCAGTaGTTGATTAACTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: PRWQWRPWVVQTSPKAGINGICQ*LINSSD
Trigger: ATCACTTGAGTTAATCAACCACTGGCAAATCCCATT...GATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp CCCTTGGAGTTGGCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCCACAGCGATGTGGATGGACATaGTCTCAAATCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLELAHSTVCCLPRVNPQRCGWT*SQIQGQ
Trigger: CTGCCCTTGGATTTGAGATCATGTCCATCCACATCG...CTGTGGGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGCCAACTCCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR TCA 90 bp CAGTCCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCAGCCTAAGAGTGTTCTCTaGCAGGGCTGTTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QSLSFPPLSRGTISELSQPKSVL*QGCSLP
Trigger: GGGCAGGGAACAGCCCTGTCAGAGAACACTCTTAGG...CTGGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR TCA 90 bp CAGGTGCAAGTCGTGTGGATAAACCTCAGGCTGAGGGAACTTAAGGCAACAGCCTTGGCCCCGCCTCTTTaGAGATACTCTGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: QVQVVWINLRLRELKATALAPPL*RYSGFT
Trigger: GGTGAAACCAGAGTATCTTCAAAGAGGCGGGGCCAA...GGCTGTTGCCTTAAGTTCCCTCAGCCTGAGGTTTATCCACACGACTTGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR GCA 90 bp CAACACTCCTCCAAAATACTTTCCTATGTAGAAGTCATCAAGGCTGTGGAGTTCCCGGACGCGCGACCGTaGTGGCCGCGTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: QHSSKILSYVEVIKAVEFPDARP*WPRSAT
Trigger: TGTTGCTGAACGCGGCCAGCACGGTCGCGCGTCCGG...GAACTCCACAGCCTTGATGACTTCTACATAGGAAAGTATTTTGGAGGAGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510623.1
CDS-3UTR GCA 90 bp AAGACAACACAACACATTTCTCCCTTGCCAGCCAAGGTGGCAGTGGAGGCCCTGAACAGCTCACAGATGTaGTGCAGTCTGGACACTTGG +
Preference number: 4 (lower is better)
Translates to: KTTQHISPLPAKVAVEALNSSQM*CSLDTW
Trigger: CCAAGTGTCCAGACTGCAGCACATCTGTGAGCTGTT...CAGGGCCTCCACTGCCACCTTGGCTGGCAAGGGAGAAATGTGTTGTGTTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CCA 90 bp ACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTCCGCACAGCCCCAAGTaGACGCAGCTGACCGCAGTC +
Preference number: 4 (lower is better)
Translates to: THIGFGQKNFTGTWRYPIPHSPK*TQLTAV
Trigger: GACTGCGGTCAGCTGCGTCCACTTGGGGCTGTGCGG...AATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp AAAGGCGGGAATCTTCACTATGTTCTCTTCCCTCCGGTGAGCCTCCTTCTCTTCGATGGCCCTGTGGGCTaGCACTGTCGTACCTTGAAT +
Preference number: 4 (lower is better)
Translates to: KGGNLHYVLFPPVSLLLFDGPVG*HCRTLN
Trigger: ATTCAAGGTACGACAGTGCCAGCCCACAGGGCCATC...GAAGAGAAGGAGGCTCACCGGAGGGAAGAGAACATAGTGAAGATTCCCGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CCTTGGAGTTGGCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCCACAGTAGTGACCCCGTCCCTTaGAGTTGGCACATTCAACTG +
Preference number: 4 (lower is better)
Translates to: PWSWHIQLSAAYQGSTHSSDPVP*SWHIQL
Trigger: CAGTTGAATGTGCCAACTCCAAGGGACGGGGTCACT...ACTGTGGGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGCCAACTCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CCA 90 bp CAGGTGCAAGTCGTGTGGATAAACCTCAGGCTGAGGGAACTTAAGGCAACAGCCCAGGTGCAAGTCGTGTaGATAAACCTCAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QVQVVWINLRLRELKATAQVQVV*INLRLR
Trigger: CCTCAGCCTGAGGTTTATCCACACGACTTGCACCTG...GGCTGTTGCCTTAAGTTCCCTCAGCCTGAGGTTTATCCACACGACTTGCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR TCA 90 bp CAACACATTTCTCCCTTGCCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGGTGGTCTAATTCCATaGAAGGAGTTGCTCATTTTT +
Preference number: 4 (lower is better)
Translates to: QHISPLPAKVAVEALGGPGGLIP*KELLIF
Trigger: AAAAATGAGCAACTCCTTTCATGGAATTAGACCACC...TGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGCAAGGGAGAAATGTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp AAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTAACACTGTCATCAATTaGGAACTAAGTGGCATTTCA +
Preference number: 4 (lower is better)
Translates to: KVAVEALGGPDLPKGGNLNTVIN*ELSGIS
Trigger: TGAAATGCCACTTAGTTCTCAATTGATGACAGTGTT...AAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp TGTCTGCTGCCTACCAAGGGTCAACCCACAGTCGTGAAGTGTACCAGTAAGTGCGTCAACCCACAGTCGTaGAGTGTACCAGTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: CLLPTKGQPTVVKCTSKCVNPQS*SVPVSA
Trigger: AGCACTTACTGGTACACTTCACGACTGTGGGTTGAC...GCACTTACTGGTACACTTCACGACTGTGGGTTGACCCTTGGTAGGCAGCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR GCA 90 bp AAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTGCTTTTCAACAAAACTaGGTTCTTCCACTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: KVAVEALGGPDLPKGGNLAFQQN*VLPLKD
Trigger: ATCTTTCAGTGGAAGAACGCAGTTTTGTTGAAAAGC...AAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR GCA 90 bp CAGTCCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCAGGACAGGGCTGTTCCCTaGCCAGTGAAACAAAGGACC +
Preference number: 4 (lower is better)
Translates to: QSLSFPPLSRGTISELSQDRAVP*PVKQRT
Trigger: GGTCCTTTGTTTCACTGGGCAGGGAACAGCCCTGTC...CTGGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR GCA 90 bp CCTTGGAGTTGGCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCCACAGTAAGTGTACCAGTAAGTaGTCCACATTCCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: PWSWHIQLSAAYQGSTHSKCTSK*STFPLG
Trigger: CCCCAGTGGGAATGTGGAGCACTTACTGGTACACTT...ACTGTGGGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGCCAACTCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CCA 90 bp GAGAACTTTCATAACAAAACTACACACTCCACACCAACTGGGCACCAGCTTCCAGGCCGGTTGTCCTGGTaGAATGTGTCCCCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: ENFHNKTTHSTPTGHQLPGRLSW*NVSPSF
Trigger: GAACGAGGGGGACACATTCCACCAGGACAACCGGCC...TGGAAGCTGGTGCCCAGTTGGTGTGGAGTGTGTAGTTTTGTTATGAAAGTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CAACACTCCTCCAAAATACTTTCCTATGTAGAAGTCATCAAGGCTGTGGAGTTCGACGCGCGACCGTGCTaGCCGCGTTCAGCAACAAGC +
Preference number: 4 (lower is better)
Translates to: QHSSKILSYVEVIKAVEFDARPC*PRSATS
Trigger: GCTTGTTGCTGAACGCGGCCAGCACGGTCGCGCGTC...GAACTCCACAGCCTTGATGACTTCTACATAGGAAAGTATTTTGGAGGAGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510623.1
CDS-3UTR CCA 90 bp AAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTAGTTCTTTTGCAAGTTaGATCCCTTCAGTTGTACTA +
Preference number: 4 (lower is better)
Translates to: KVAVEALGGPDLPKGGNLSSFAS*IPSVVL
Trigger: TAGTACAACTGAAGGGATCCAACTTGCAAAAGAACT...AAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CCACACCAACTGGGCACCAGCTTCCAAACCCAACTCCACTTCAGGTCAAACAACACCACGTCCACACACTaGCAGCAGAACAGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: PHQLGTSFQTQLHFRSNNTTSTH*QQNSKL
Trigger: TAACTTGCTGTTCTGCTGCCAGTGTGTGGACGTGGT...GTTGTTTGACCTGAAGTGGAGTTGGGTTTGGAAGCTGGTGCCCAGTTGGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CAACACATTTCTCCCTTGCCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAATAAAGTGGCTCAATTaGGTTGTCCAGATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: QHISPLPAKVAVEALGGPIKWLN*VVQMKS
Trigger: GCTTTTCATCTGGACAACCCAATTGAGCCACTTTAT...TGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGCAAGGGAGAAATGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CCCAGTCCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCCCCGTCCCTTGGAGTTaGCACATTCAACTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSPCLFLRFPEELFLNCPPVPWS*HIQLSA
Trigger: AGCAGACAGTTGAATGTGCCAACTCCAAGGGACGGG...GGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGGACTGGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CCA 90 bp CAGCCCTGCCACATCCTTTTCTCTGGACAGAGCTGTCACTTAGCTCCCCCTCCGGTAAAAAGCTGCTTCTaGGAGTGGATTTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: QPCHILFSGQSCHLAPPPVKSCF*EWIFFP
Trigger: AGGGAAGAAAATCCACTCCCAGAAGCAGCTTTTTAC...CGGAGGGGGAGCTAAGTGACAGCTCTGTCCAGAGAAAAGGATGTGGCAGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR TCA 90 bp CCAGCCCTGCCACATCCTTTTCTCTGGACAGAGCTGTCACTTAGCTCCCCCTCCCACCATAAAACTTCCTaGAAGATCCTGAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: PALPHPFLWTELSLSSPSHHKTS*KILKFR
Trigger: CCTGAATTTCAGGATCTTTCAGGAAGTTTTATGGTG...GGAGGGGGAGCTAAGTGACAGCTCTGTCCAGAGAAAAGGATGTGGCAGGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR GCA 90 bp CCCAGTCCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCCATTCAACTGTCTGCTaGCTACCAAGGGTCAACCCA +
Preference number: 4 (lower is better)
Translates to: PSPCLFLRFPEELFLNCPHSTVC*LPRVNP
Trigger: TGGGTTGACCCTTGGTAGGCAGCAGACAGTTGAATG...GGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGGACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CCA 90 bp CAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTATGAATTTTACTGGAACCTaGAGGTATCCCATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: QWRPWVVQTSPKAGIFTMNFTGT*RYPILH
Trigger: ATGAAGAATGGGATACCTCCAGGTTCCAGTAAAATT...CATAGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CAGGTGCAAGTCGTGTGGATAAACCTCAGGCTGAGGGAACTTAAGGCAACAGCCCCACATCCTTTTCTCTaGACAGAGCTGTCACTTAGC +
Preference number: 4 (lower is better)
Translates to: QVQVVWINLRLRELKATAPHPFL*TELSLS
Trigger: GCTAAGTGACAGCTCTGTCCAGAGAAAAGGATGTGG...GGCTGTTGCCTTAAGTTCCCTCAGCCTGAGGTTTATCCACACGACTTGCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR GCA 90 bp AAGACAACACAACACATTTCTCCCTTGCCAGCCAAGGTGGCAGTGGAGGCCCTGCTGTATTCCGCAAGCTaGTTCAAGTACATATTCGAC +
Preference number: 4 (lower is better)
Translates to: KTTQHISPLPAKVAVEALLYSAS*FKYIFD
Trigger: GTCGAATATGTACTTGAAGCAGCTTGCGGAATACAG...CAGGGCCTCCACTGCCACCTTGGCTGGCAAGGGAGAAATGTGTTGTGTTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CCA 90 bp GAGAACTTTCATAACAAAACTACACACTCCACACCAACTGGGCACCAGCTTCCACAGACGGGACAGTCGTaGACCACCAGCTTGACATTC +
Preference number: 4 (lower is better)
Translates to: ENFHNKTTHSTPTGHQLPQTGQS*TTSLTF
Trigger: GAATGTCAAGCTGGTGGTCCACGACTGTCCCGTCTG...TGGAAGCTGGTGCCCAGTTGGTGTGGAGTGTGTAGTTTTGTTATGAAAGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp AAAGGCGGGAATCTTCACTATGTTCTCTTCCCTCCGGTGAGCCTCCTTCTCTTCAGCAGCATGAAAACATaGCTTACAGCGCAGAGAACG +
Preference number: 4 (lower is better)
Translates to: KGGNLHYVLFPPVSLLLFSSMKT*LTAQRT
Trigger: CGTTCTCTGCGCTGTAAGCCATGTTTTCATGCTGCT...GAAGAGAAGGAGGCTCACCGGAGGGAAGAGAACATAGTGAAGATTCCCGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp CAACACTCCTCCAAAATACTTTCCTATGTAGAAGTCATCAAGGCTGTGGAGTTCCCAAACGCACTGGCCTaGTACTCGGTGAACACCGGA +
Preference number: 4 (lower is better)
Translates to: QHSSKILSYVEVIKAVEFPNALA*YSVNTG
Trigger: TCCGGTGTTCACCGAGTATCAGGCCAGTGCGTTTGG...GAACTCCACAGCCTTGATGACTTCTACATAGGAAAGTATTTTGGAGGAGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510623.1
CDS-3UTR TCA 90 bp CAACACTCCTCCAAAATACTTTCCTATGTAGAAGTCATCAAGGCTGTGGAGTTCCGTGGACCACCAGCTTaGCATTCCCAAACGCACTGG +
Preference number: 4 (lower is better)
Translates to: QHSSKILSYVEVIKAVEFRGPPA*HSQTHW
Trigger: CCAGTGCGTTTGGGAATGTCAAGCTGGTGGTCCACG...GAACTCCACAGCCTTGATGACTTCTACATAGGAAAGTATTTTGGAGGAGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510623.1
CDS-3UTR TCA 90 bp CCACACCAACTGGGCACCAGCTTCCAAACCCAACTCCACTTCAGGTCAAACAACCCACTGAAAAGCACCTaGATAAATGAAGCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: PHQLGTSFQTQLHFRSNNPLKST*INEAKD
Trigger: ATCCTTCGCTTCATTTATTCAGGTGCTTTTCAGTGG...GTTGTTTGACCTGAAGTGGAGTTGGGTTTGGAAGCTGGTGCCCAGTTGGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp CGGGAATCTTCACTATGTTCTCTTCCCTCCGGTGAGCCTCCTTCTCTTCCCTTTCGACATTTCCGGGAGTaGATATACTTCCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: RESSLCSLPSGEPPSLPFRHFRE*IYFLYS
Trigger: GGAATACAGGAAGTATATTCACTCCCGGAAATGTCG...AAAGGGAAGAGAAGGAGGCTCACCGGAGGGAAGAGAACATAGTGAAGATTCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR TCA 90 bp TGTCTGCTGCCTACCAAGGGTCAACCCACAGTCGTGAAGTGTACCAGTAAGTGCTCTGAACTGTCCCAGTaGAAAGTATTTTTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CLLPTKGQPTVVKCTSKCSELSQ*KVFLPV
Trigger: CACAGGCAAAAATACTTTTCACTGGGACAGTTCAGA...GCACTTACTGGTACACTTCACGACTGTGGGTTGACCCTTGGTAGGCAGCAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR TCA 90 bp CCTTGGAGTTGGCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCCACAGTCAGAGGAACTATTTCTaGACTGTCCCAGTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: PWSWHIQLSAAYQGSTHSQRNYF*TVPVKS
Trigger: ACTTTTCACTGGGACAGTTCAGAAATAGTTCCTCTG...ACTGTGGGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGCCAACTCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR GCA 90 bp GCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTATGTTCTCTTCGCTTTTCAACAAAACTaGGTTCTTCCACTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: ALGGPDLPKGGNLHYVLFAFQQN*VLPLKD
Trigger: ATCTTTCAGTGGAAGAACGCAGTTTTGTTGAAAAGC...GAAGAGAACATAGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR GCA 90 bp CCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCAGTGAAGCACATTCAACTGTCTaGTGCCTACCAAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: PCLFLRFPEELFLNCPSEAHSTV*CLPRVN
Trigger: GTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGC...TTCACTGGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR GCA 90 bp CAGGTGCAAGTCGTGTGGATAAACCTCAGGCTGAGGGAACTTAAGGCAACAGCCGTCACAGTAAAAAGCTaGTTCTGGGAGTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: QVQVVWINLRLRELKATAVTVKS*FWEWIF
Trigger: GAAAATCCACTCCCAGAAGCAGCTTTTTACTGTGAC...GGCTGTTGCCTTAAGTTCCCTCAGCCTGAGGTTTATCCACACGACTTGCACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR CCA 90 bp AAGCATTTCTTAACTGAGAGGGGTCTAAATATCACTAAAGCAACAGGACATCTTTGGCAGTGGAGGCCCTaGGTGGTCCAGACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: KHFLTERGLNITKATGHLWQWRP*VVQTSP
Trigger: TGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCA...AAGATGTCCTGTTGCTTTAGTGATATTTAGACCCCTCTCAGTTAAGAAATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp TTTGAGCAAGAAAACATAGGATATTTCCCACCACGAAACAGACATAATTTTGAGTGGCCTGATACTCGGTaGACACCGGACGCGCGACCG +
Preference number: 4 (lower is better)
Translates to: FEQENIGYFPPRNRHNFEWPDTR*TPDARP
Trigger: CGGTCGCGCGTCCGGTGTTCACCGAGTATCAGGCCA...CTCAAAATTATGTCTGTTTCGTGGTGGGAAATATCCTATGTTTTCTTGCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp CTAGCTCTGGAGAGCTGTGACATCTGGATGTTGGTGTCACTCACACAGGTAGGTTGTTACTACTTAATATaGAGCCACCATGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LALESCDIWMLVSLTQVGCYYLI*SHHAGL
Trigger: CAAGCCAGCATGGTGGCTTCATATTAAGTAGTAACA...ACCTACCTGTGTGAGTGACACCAACATCCAGATGTCACAGCTCTCCAGAGCTAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CAACACTCCTCCAAAATACTTTCCTATGTAGAAGTCATCAAGGCTGTGGAGTTCCAGACGGGACAGTCGTaGACCACCAGCTTGACATTC +
Preference number: 4 (lower is better)
Translates to: QHSSKILSYVEVIKAVEFQTGQS*TTSLTF
Trigger: GAATGTCAAGCTGGTGGTCCACGACTGTCCCGTCTG...GAACTCCACAGCCTTGATGACTTCTACATAGGAAAGTATTTTGGAGGAGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510623.1
CDS-3UTR CCA 90 bp ACCAACCTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATACAGCCAAGGTGGCAGTaGAGGCCCTGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TNLLVLQNDQESICSSMIQPRWQ*RPWVVQ
Trigger: CTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTG...TATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAGGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CCA 90 bp CGGGAATCTTCACTATGTTCTCTTCCCTCCGGTGAGCCTCCTTCTCTTCCCTTTCTCTTACCAACCTCCTaGTCTTACAGAATGATCAAG +
Preference number: 4 (lower is better)
Translates to: RESSLCSLPSGEPPSLPFLLPTS*SYRMIK
Trigger: CTTGATCATTCTGTAAGACCAGGAGGTTGGTAAGAG...AAAGGGAAGAGAAGGAGGCTCACCGGAGGGAAGAGAACATAGTGAAGATTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CCA 90 bp AAGATCCTGGGTAGTTCGGATGATACTGGAATCCTGAATGTCAGTGGGACTCTTAGCAGCATGAAAACATaGCTTACAGCGCAGAGAACG +
Preference number: 4 (lower is better)
Translates to: KILGSSDDTGILNVSGTLSSMKT*LTAQRT
Trigger: CGTTCTCTGCGCTGTAAGCCATGTTTTCATGCTGCT...AAGAGTCCCACTGACATTCAGGATTCCAGTATCATCCGAACTACCCAGGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR CCA 90 bp ACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTAGATCAGGAGACACATaGCCTGGAATATGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: THIGFGQKNFTGTWRYPIRSGDT*PGICQL
Trigger: CAGCTGGCATATTCCAGGCCATGTGTCTCCTGATCT...AATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR CAA 72 bp AAGAGGGCGTCTTTAACAATGACTCGTAATGGTGGGTaGCCTGAAGATTCATGGCTAGCACCTGGAAATGCA +
Preference number: 4 (lower is better)
Translates to: KRASLTMTRNGG*PEDSWLAPGNA
Trigger: TGCATTTCCAGGTGCTAGCCATGAATCTTCAGGCAACCCACCATTACGAGTCATTGTTAAAGACGCCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR TCA 90 bp AAGGTGTTTGAGCAAGAAAACATAGGATATTTCCCACCACGAAACAGACATAATCCAAACGCACTGGCCTaGTACTCGGTGAACACCGGA +
Preference number: 4 (lower is better)
Translates to: KVFEQENIGYFPPRNRHNPNALA*YSVNTG
Trigger: TCCGGTGTTCACCGAGTATCAGGCCAGTGCGTTTGG...ATTATGTCTGTTTCGTGGTGGGAAATATCCTATGTTTTCTTGCTCAAACACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp ACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTGGCACTGTCGTACCTTaGATTTCGAAGACAACATCG +
Preference number: 4 (lower is better)
Translates to: THIGFGQKNFTGTWRYPIGTVVP*ISKTTS
Trigger: CGATGTTGTCTTCGAAATTCAAGGTACGACAGTGCC...AATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CTACAACTTTCTTTAAATTGGGGTTGTAAAATACCACGTCCACACACTGGCAGCACCACGTCCACACACTaGCAGCAGAACAGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: LQLSLNWGCKIPRPHTGSTTSTH*QQNSKL
Trigger: TAACTTGCTGTTCTGCTGCCAGTGTGTGGACGTGGT...GCTGCCAGTGTGTGGACGTGGTATTTTACAACCCCAATTTAAAGAAAGTTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR CCA 90 bp CAGGTGCAAGTCGTGTGGATAAACCTCAGGCTGAGGGAACTTAAGGCAACAGCCTCTTTGAAGATACTCTaGTTTCACCATAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: QVQVVWINLRLRELKATASLKIL*FHHKTS
Trigger: GGAAGTTTTATGGTGAAACCAGAGTATCTTCAAAGA...GGCTGTTGCCTTAAGTTCCCTCAGCCTGAGGTTTATCCACACGACTTGCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR GCA 90 bp TTTGAGCAAGAAAACATAGGATATTTCCCACCACGAAACAGACATAATTTTGAGCGTTCAGCAACAAGCTaGTCTCGTCCCCGGAGACCA +
Preference number: 4 (lower is better)
Translates to: FEQENIGYFPPRNRHNFERSATS*SRPRRP
Trigger: TGGTCTCCGGGGACGAGAGCAGCTTGTTGCTGAACG...CTCAAAATTATGTCTGTTTCGTGGTGGGAAATATCCTATGTTTTCTTGCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp AAGCATTTCTTAACTGAGAGGGGTCTAAATATCACTAAAGCAACAGGACATCTTAGGAGACACATGGCCTaGAATATGCCAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KHFLTERGLNITKATGHLRRHMA*NMPAGQ
Trigger: CTGCCCAGCTGGCATATTCCAGGCCATGTGTCTCCT...AAGATGTCCTGTTGCTTTAGTGATATTTAGACCCCTCTCAGTTAAGAAATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATAGAGCAATGCCAGTTCCCTGCTTaGCATGCTCTGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLVLQNDQESICSSMIEQCQFPA*HALQLG
Trigger: ACCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCA...TTGCTCTATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACTGCCAGTTCCCTGCTTaGCATGCTCTGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHCQFPA*HALQLG
Trigger: ACCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCA...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CCA 90 bp GAGAACTTTCATAACAAAACTACACACTCCACACCAACTGGGCACCAGCTTCCACAAGGGCTAACGGTATaGGGTCCCAATATTATACTA +
Preference number: 4 (lower is better)
Translates to: ENFHNKTTHSTPTGHQLPQGLTV*GPNIIL
Trigger: TAGTATAATATTGGGACCCCATACCGTTAGCCCTTG...TGGAAGCTGGTGCCCAGTTGGTGTGGAGTGTGTAGTTTTGTTATGAAAGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
3UTR CAA 72 bp AGCATGAAAACATGGCTTACAGCGCAGAGAACGATCTaGTGGGCCTCTACAACTTTCTTTAAATTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SMKTWLTAQRTI*WASTTFFKLGL
Trigger: CAACCCCAATTTAAAGAAAGTTGTAGAGGCCCACAAGATCGTTCTCTGCGCTGTAAGCCATGTTTTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR TCA 90 bp TTAACAATGACTCGTAATGGTGGGTTGCCTGAAGATTCATGGCTAGCACCTGGAAAGCACCTGAATAAATaGAGCGAAGGATGTCTGATA +
Preference number: 4 (lower is better)
Translates to: LTMTRNGGLPEDSWLAPGKHLNK*SEGCLI
Trigger: TATCAGACATCCTTCGCTTCATTTATTCAGGTGCTT...TCCAGGTGCTAGCCATGAATCTTCAGGCAACCCACCATTACGAGTCATTGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR GCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACACATGGCCTGGAATATaGCAGCTGGGCAGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHTWPGI*QLGSRS
Trigger: ACTCCTGCTGCCCAGCTGGCATATTCCAGGCCATGT...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR GCA 90 bp CCCTATAATATGAACAGTGAGCAGTCAGAAATATACAAAGGGTTAAATAGGGTATGGATGCCAGTTCCCTaGTTGGCATGCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PYNMNSEQSEIYKGLNRVWMPVP*LACSAA
Trigger: AGCTGCAGAGCATGCCAAGCAGGGAACTGGCATCCA...TACCCTATTTAACCCTTTGTATATTTCTGACTGCTCACTGTTCATATTATAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR GCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACTGGATGCCAGTTCCCTaGTTGGCATGCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHWMPVP*LACSAA
Trigger: AGCTGCAGAGCATGCCAAGCAGGGAACTGGCATCCA...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR GCA 90 bp ACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTCTGTATTCCGCAAGCTaGTTCAAGTACATATTCGAC +
Preference number: 4 (lower is better)
Translates to: THIGFGQKNFTGTWRYPILYSAS*FKYIFD
Trigger: GTCGAATATGTACTTGAAGCAGCTTGCGGAATACAG...AATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000514198.1
CDS-3UTR CCA 90 bp AAAACATGGCTTACAGCGCAGAGAACGATCTTGTGGGCCTCTACAACTTTCTTTCAGAGAACGATCTTGTaGGCCTCTACAACTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KTWLTAQRTILWASTTFFQRTIL*ASTTFF
Trigger: AAAGAAAGTTGTAGAGGCCCACAAGATCGTTCTCTG...AAAGAAAGTTGTAGAGGCCCACAAGATCGTTCTCTGCGCTGTAAGCCATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR CCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACGATGGCCCTGTGGGCTaGCACTGTCGTACCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHDGPVG*HCRTLN
Trigger: ATTCAAGGTACGACAGTGCCAGCCCACAGGGCCATC...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACAGGAGACACATGGCCTaGAATATGCCAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHRRHMA*NMPAGQ
Trigger: CTGCCCAGCTGGCATATTCCAGGCCATGTGTCTCCT...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CCA 90 bp ACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTCTTCCTATATCAAGGTTCATaGATGCCAGTTCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TLVSVRRILLEPGGIPFFLYQGS*MPVPCL
Trigger: CAAGCAGGGAACTGGCATCCATGAACCTTGATATAG...GAAGAATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp AACCTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATAGAGACACTCCACACCAACTaGGCACCAGCTTCCAAACCC +
Preference number: 4 (lower is better)
Translates to: NLLVLQNDQESICSSMIETLHTN*APASKP
Trigger: GGGTTTGGAAGCTGGTGCCCAGTTGGTGTGGAGTGT...CTCTATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp AGTTCGGATGATACTGGAATCCTGAATGTCAGTGGGACTCTTCACATTGAAAAGCCACTGAAAAGCACCTaGATAAATGAAGCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: SSDDTGILNVSGTLHIEKPLKST*INEAKD
Trigger: ATCCTTCGCTTCATTTATTCAGGTGCTTTTCAGTGG...CTTTTCAATGTGAAGAGTCCCACTGACATTCAGGATTCCAGTATCATCCGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR TCA 90 bp ACCAACCTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATAAGCTCTGGAGAGCTGTaGCATCTGGATGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: TNLLVLQNDQESICSSMISSGEL*HLDVGV
Trigger: GACACCAACATCCAGATGTCACAGCTCTCCAGAGCT...TATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAGGTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR GCA 90 bp GGTAATTTTTCTAACACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTTCAAGCGATTTTCCTaGCTCAGCTTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GNFSNTHIGFGQKNFTGTFKRFS*LSFLSS
Trigger: GCTACTCAGGAAGCTGAGGCAGGAAAATCGCTTGAA...GGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAAAATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp AAGATCCTGGGTAGTTCGGATGATACTGGAATCCTGAATGTCAGTGGGACTCTTAGTTCTTTTGCAAGTTaGATCCCTTCAGTTGTACTA +
Preference number: 4 (lower is better)
Translates to: KILGSSDDTGILNVSGTLSSFAS*IPSVVL
Trigger: TAGTACAACTGAAGGGATCCAACTTGCAAAAGAACT...AAGAGTCCCACTGACATTCAGGATTCCAGTATCATCCGAACTACCCAGGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR CCA 90 bp ACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTCTTCCAGAGAACGATCTTGTaGGCCTCTACAACTTTCTTT +
Preference number: 4 (lower is better)
Translates to: TLVSVRRILLEPGGIPFFQRTIL*ASTTFF
Trigger: AAAGAAAGTTGTAGAGGCCCACAAGATCGTTCTCTG...GAAGAATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp ACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTCTTCTTCATGGCTAGCACCTaGAAATGCAGTATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: TLVSVRRILLEPGGIPFFFMAST*KCSISV
Trigger: AACAGAGATACTGCATTTCCAGGTGCTAGCCATGAA...GAAGAATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp GGGCCTCTACAACTTTCTTTAAATTGGGGTTGTAAAATACCACGTCCACACACTTTCATGGCTAGCACCTaGAAATGCAGTATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GPLQLSLNWGCKIPRPHTFMAST*KCSISV
Trigger: AACAGAGATACTGCATTTCCAGGTGCTAGCCATGAA...AGTGTGTGGACGTGGTATTTTACAACCCCAATTTAAAGAAAGTTGTAGAGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR CCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACCTGGAATATGCCAGCTaGGCAGCAGGAGTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHLEYAS*AAGVCV
Trigger: TACACAGACTCCTGCTGCCCAGCTGGCATATTCCAG...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CCA 90 bp CCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTCATTTCACTTTCCAAATaGCCGGCAAATTTCTATTCC +
Preference number: 4 (lower is better)
Translates to: PTLVSVRRILLEPGGIPFISLSK*PANFYS
Trigger: GGAATAGAAATTTGCCGGCCATTTGGAAAGTGAAAT...GAATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp TTTGAGCAAGAAAACATAGGATATTTCCCACCACGAAACAGACATAATTTTGAGCGATGTGGATGGACATaGTCTCAAATCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FEQENIGYFPPRNRHNFERCGWT*SQIQGQ
Trigger: CTGCCCTTGGATTTGAGATCATGTCCATCCACATCG...CTCAAAATTATGTCTGTTTCGTGGTGGGAAATATCCTATGTTTTCTTGCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp CTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATAGAGCAAGGGCTCAGCACAAAATaGAATCATGGGGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLVLQNDQESICSSMIEQGLSTK*NHGALL
Trigger: AAGAAGGGCCCCATGATTTCATTTTGTGCTGAGCCC...TTGCTCTATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp ACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTGGATTTGCCAGTGGTTaGTTAACTCAAGTGATTAAA +
Preference number: 4 (lower is better)
Translates to: THIGFGQKNFTGTWRYPIGFASG*LTQVIK
Trigger: TTTAATCACTTGAGTTAATCAACCACTGGCAAATCC...AATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR GCA 90 bp CCCTATAATATGAACAGTGAGCAGTCAGAAATATACAAAGGGTTAAATAGGGTAAGCTCACAGATGTGCTaGAGTCTGGACACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: PYNMNSEQSEIYKGLNRVSSQMC*SLDTWY
Trigger: GTACCAAGTGTCCAGACTGCAGCACATCTGTGAGCT...TACCCTATTTAACCCTTTGTATATTTCTGACTGCTCACTGTTCATATTATAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR GCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACAGCTCACAGATGTGCTaGAGTCTGGACACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHSSQMC*SLDTWY
Trigger: GTACCAAGTGTCCAGACTGCAGCACATCTGTGAGCT...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR GCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACAACAGCTCACAGATGTaGTGCAGTCTGGACACTTGG +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHNSSQM*CSLDTW
Trigger: CCAAGTGTCCAGACTGCAGCACATCTGTGAGCTGTT...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CCA 90 bp AAAATACCACGTCCACACACTGGCAGCAGAACAGCAAGTTATTTAAGTCAGAGTATAGCAAAAAGATCCTaGGTAGTTCGGATGATACTG +
Preference number: 4 (lower is better)
Translates to: KIPRPHTGSRTASYLSQSIAKRS*VVRMIL
Trigger: CAGTATCATCCGAACTACCCAGGATCTTTTTGCTAT...ACTCTGACTTAAATAACTTGCTGTTCTGCTGCCAGTGTGTGGACGTGGTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR CCA 90 bp GGAAATGCAGTATCTCTGTTTATAGCAAAAAGATCCTGGGTAGTTCGGATGATATTGCCTGAAGATTCATaGCTAGCACCTGGAAATGCA +
Preference number: 4 (lower is better)
Translates to: GNAVSLFIAKRSWVVRMILPEDS*LAPGNA
Trigger: TGCATTTCCAGGTGCTAGCCATGAATCTTCAGGCAA...TATCATCCGAACTACCCAGGATCTTTTTGCTATAAACAGAGATACTGCATTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR CCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACAGATCAGGAGACACATaGCCTGGAATATGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHRSGDT*PGICQL
Trigger: CAGCTGGCATATTCCAGGCCATGTGTCTCCTGATCT...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACTGCAGTCTGGACACTTaGTACATCTCGGCACAGATC +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHCSLDT*YISAQI
Trigger: GATCTGTGCCGAGATGTACCAAGTGTCCAGACTGCA...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACAGATGTGCTGCAGTCTaGACACTTGGTACATCTCGG +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHRCAAV*TLGTSR
Trigger: CCGAGATGTACCAAGTGTCCAGACTGCAGCACATCT...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR TCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACGGCACTGTCGTACCTTaGATTTCGAAGACAACATCG +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHGTVVP*ISKTTS
Trigger: CGATGTTGTCTTCGAAATTCAAGGTACGACAGTGCC...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR TCA 90 bp AAGCATTTCTTAACTGAGAGGGGTCTAAATATCACTAAAGCAACAGGACATCTTCGACATTTCCGGGAGTaGATATACTTCCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: KHFLTERGLNITKATGHLRHFRE*IYFLYS
Trigger: GGAATACAGGAAGTATATTCACTCCCGGAAATGTCG...AAGATGTCCTGTTGCTTTAGTGATATTTAGACCCCTCTCAGTTAAGAAATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000514198.1
CDS-3UTR GCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACACCATTAAACATGGCTaGCATCACTTCACAACGGGC +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHTIKHG*HHFTTG
Trigger: GCCCGTTGTGAAGTGATGGCAGCCATGTTTAATGGT...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CCA 90 bp CAACACTCCTCCAAAATACTTTCCTATGTAGAAGTCATCAAGGCTGTGGAGTTCAGTTCTTTTGCAAGTTaGATCCCTTCAGTTGTACTA +
Preference number: 4 (lower is better)
Translates to: QHSSKILSYVEVIKAVEFSSFAS*IPSVVL
Trigger: TAGTACAACTGAAGGGATCCAACTTGCAAAAGAACT...GAACTCCACAGCCTTGATGACTTCTACATAGGAAAGTATTTTGGAGGAGTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510623.1
CDS-3UTR CCA 90 bp TTGTTCAGACTTCTGTTACTACTTAATATGAAGCCACCATGCTGGCTTGGACAGTTGTTCAAGTTGAGGTaGTCTAATTCCATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LFRLLLLLNMKPPCWLGQLFKLR*SNSMKG
Trigger: TCCTTTCATGGAATTAGACCACCTCAACTTGAACAA...CTGTCCAAGCCAGCATGGTGGCTTCATATTAAGTAGTAACAGAAGTCTGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp GGTAATTTTTCTAACACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCCAAAAGGAGATAAAGTaGCTCAATTGGGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GNFSNTHIGFGQKNFTGTQKEIK*LNWVVQ
Trigger: CTGGACAACCCAATTGAGCCACTTTATCTCCTTTTG...GGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAAAATTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp GGTAATTTTTCTAACACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCCTCTTACCAACCTCCTaGTCTTACAGAATGATCAAG +
Preference number: 4 (lower is better)
Translates to: GNFSNTHIGFGQKNFTGTLLPTS*SYRMIK
Trigger: CTTGATCATTCTGTAAGACCAGGAGGTTGGTAAGAG...GGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAAAATTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACCAACCAAATGTCACCTaGGGACACATTTTGTCACCT +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHQPNVT*GHILSP
Trigger: AGGTGACAAAATGTGTCCTCAGGTGACATTTGGTTG...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR GCA 90 bp AAGCATTTCTTAACTGAGAGGGGTCTAAATATCACTAAAGCAACAGGACATCTTCTGTATTCCGCAAGCTaGTTCAAGTACATATTCGAC +
Preference number: 4 (lower is better)
Translates to: KHFLTERGLNITKATGHLLYSAS*FKYIFD
Trigger: GTCGAATATGTACTTGAAGCAGCTTGCGGAATACAG...AAGATGTCCTGTTGCTTTAGTGATATTTAGACCCCTCTCAGTTAAGAAATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000514198.1
CDS-3UTR CCA 90 bp GGTAATTTTTCTAACACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCATAGCAAAAAGATCCTaGGTAGTTCGGATGATACTG +
Preference number: 4 (lower is better)
Translates to: GNFSNTHIGFGQKNFTGTIAKRS*VVRMIL
Trigger: CAGTATCATCCGAACTACCCAGGATCTTTTTGCTAT...GGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAAAATTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACCTATATCAAGGTTCATaGATGCCAGTTCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHLYQGS*MPVPCL
Trigger: CAAGCAGGGAACTGGCATCCATGAACCTTGATATAG...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR TCA 90 bp AAGGTGTTTGAGCAAGAAAACATAGGATATTTCCCACCACGAAACAGACATAATAAGCACCTGAATAAATaGAGCGAAGGATGTCTGATA +
Preference number: 4 (lower is better)
Translates to: KVFEQENIGYFPPRNRHNKHLNK*SEGCLI
Trigger: TATCAGACATCCTTCGCTTCATTTATTCAGGTGCTT...ATTATGTCTGTTTCGTGGTGGGAAATATCCTATGTTTTCTTGCTCAAACACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR GCA 90 bp GGTAATTTTTCTAACACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCGCTTTTCAACAAAACTaGGTTCTTCCACTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: GNFSNTHIGFGQKNFTGTAFQQN*VLPLKF
Trigger: AAACTTCAGTGGAAGAACGCAGTTTTGTTGAAAAGC...GGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAAAATTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000514198.1
CDS-3UTR CCA 90 bp GGTAATTTTTCTAACACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCCTAATCTTTGTCAAATaGGATTTGCCAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: GNFSNTHIGFGQKNFTGTLIFVK*DLPVVD
Trigger: ATCAACCACTGGCAAATCCCATTTGACAAAGATTAG...GGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAAAATTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp AAGGTGTTTGAGCAAGAAAACATAGGATATTTCCCACCACGAAACAGACATAATCCTGGTCTTACAGAATaGTCAAGAAAGTATTTGTTC +
Preference number: 4 (lower is better)
Translates to: KVFEQENIGYFPPRNRHNPGLTE*SRKYLF
Trigger: GAACAAATACTTTCTTGATCATTCTGTAAGACCAGG...ATTATGTCTGTTTCGTGGTGGGAAATATCCTATGTTTTCTTGCTCAAACACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp AAGGTGTTTGAGCAAGAAAACATAGGATATTTCCCACCACGAAACAGACATAATAAGAATTTAAGCCACTaGCGTCCTAATCTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: KVFEQENIGYFPPRNRHNKNLSH*RPNLGK
Trigger: TTTACCAAGATTAGGACGTCAGTGGCTTAAATTCTT...ATTATGTCTGTTTCGTGGTGGGAAATATCCTATGTTTTCTTGCTCAAACACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp AAGCATTTCTTAACTGAGAGGGGTCTAAATATCACTAAAGCAACAGGACATCTTAATTTTACTGGAACCTaGAGGTATCCCATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KHFLTERGLNITKATGHLNFTGT*RYPILH
Trigger: ATGAAGAATGGGATACCTCCAGGTTCCAGTAAAATT...AAGATGTCCTGTTGCTTTAGTGATATTTAGACCCCTCTCAGTTAAGAAATGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000514198.1
CDS-3UTR CCA 90 bp GGTAATTTTTCTAACACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCCCTAATGTTTTACTTTaGCAGTGTTGGTATACATAC +
Preference number: 4 (lower is better)
Translates to: GNFSNTHIGFGQKNFTGTPNVLL*QCWYTY
Trigger: GTATGTATACCAACACTGCCAAAGTAAAACATTAGG...GGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAAAATTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR TCA 90 bp ACCAACCTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATACCTGGTCTTACAGAATaGTCAAGAAAGTATTTGTTC +
Preference number: 4 (lower is better)
Translates to: TNLLVLQNDQESICSSMIPGLTE*SRKYLF
Trigger: GAACAAATACTTTCTTGATCATTCTGTAAGACCAGG...TATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAGGTTGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR TCA 90 bp AACCTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATAGAGCTAAAAACAAATTCTTaGGCCAACTTCGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: NLLVLQNDQESICSSMIELKTNS*ANFGSK
Trigger: TTTGCTACCGAAGTTGGCTCAAGAATTTGTTTTTAG...CTCTATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAGGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR GCA 90 bp ATATACAAAGGGTTAAATAGGGTAAAGACTTTGGCCAAGAAAGGAAAGGCCTTAAATCAGGACACTCTTTaGTTCCATGTAATTACCATT +
Preference number: 4 (lower is better)
Translates to: IYKGLNRVKTLAKKGKALNQDTL*FHVITI
Trigger: AATGGTAATTACATGGAAGCAAAGAGTGTCCTGATT...TAAGGCCTTTCCTTTCTTGGCCAAAGTCTTTACCCTATTTAACCCTTTGTATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR GCA 90 bp ACCAACCTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATATTCCCTTTATATCAGTaGCTTTTTCTGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TNLLVLQNDQESICSSMIFPLYQ*LFLLSE
Trigger: CTCTGAAAGCAGAAAAAGGCACTGATATAAAGGGAA...TATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAGGTTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp ACCAACCTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATAACAAGAAAGTCTCTTTaGAAACACCATAAACGGGAA +
Preference number: 4 (lower is better)
Translates to: TNLLVLQNDQESICSSMITRKSL*KHHKRE
Trigger: TTCCCGTTTATGGTGTTTCCAAAGAGACTTTCTTGT...TATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAGGTTGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACACAAGAAAGTCTCTTTaGAAACACCATAAACGGGAA +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHTRKSL*KHHKRE
Trigger: TTCCCGTTTATGGTGTTTCCAAAGAGACTTTCTTGT...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CCA 90 bp CTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATAGAGCAATACAAATGGTTATGCTaGGTCTTTAAATGCCCCTTA +
Preference number: 4 (lower is better)
Translates to: LLVLQNDQESICSSMIEQYKWLC*VFKCPL
Trigger: TAAGGGGCATTTAAAGACCCAGCATAACCATTTGTA...TTGCTCTATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CCA 90 bp CTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATAGAGCAAGTATTAAAGTTAGGCTaGTTAGTCACTCTTACCAAC +
Preference number: 4 (lower is better)
Translates to: LLVLQNDQESICSSMIEQVLKLG*LVTLTN
Trigger: GTTGGTAAGAGTGACTAACCAGCCTAACTTTAATAC...TTGCTCTATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
3UTR CAA 72 bp ATATTAAGCTATATGGTAATTTTTCTAACACCCACATaGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: ILSYMVIFLTPT*VSVRRILLEPG
Trigger: TCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAAAATTACCATATAGCTTAATAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000514198.1
CDS-3UTR GCA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACAATCAGGACACTCTTTaGTTCCATGTAATTACCATT +
Preference number: 4 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHNQDTL*FHVITI
Trigger: AATGGTAATTACATGGAAGCAAAGAGTGTCCTGATT...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS CCA 90 bp TGCCCGGGAACATCGCCGGGCGCGGGACCGCCGCACAGCCCCAAGTaGACGCAGCTGACCGCAGTCCCCTCTCCGCCGCGCCTCCTCGGC +
Preference number: 5 (lower is better)
Translates to: CPGTSPGAGPPHSPK*TQLTAVPSPPRLLG
Trigger: GCCGAGGAGGCGCGGCGGAGAGGGGACTGCGGTCAGCTGCGTCCACTTGGGGCTGTGCGGCGGTCCCGCGCCCGGCGATGTTCCCGGGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000506817.1
CDS GCA 90 bp CGAGCGAGCCGGGGACCAGGGCGGGCTAGCGGGCGGGGGATAAGCTaGCGCTACTCAGGGAGTGCCCGGGAACATCGCCGGGCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: RASRGPGRASGRGIS*RYSGSAREHRRARD
Trigger: GTCCCGCGCCCGGCGATGTTCCCGGGCACTCCCTGAGTAGCGGCAGCTTATCCCCCGCCCGCTAGCCCGCCCTGGTCCCCGGCTCGCTCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000506817.1
CDS-3UTR CAA 90 bp CCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGCAACACATTTCTCCCTaGCCAGCCAAGGTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: PAKVAVEALGGPDLPKGGQHISP*PAKVAV
Trigger: CACTGCCACCTTGGCTGGCAAGGGAGAAATGTGTTG...CCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS TCA 90 bp GGACAGTCGTGGACCACCAGCTTGACATTCCCAAACGCACTGGCCTaGTACTCGGTGAACACCGGACGCGCGACCGTGCTGGCCGCGTTC +
Preference number: 5 (lower is better)
Translates to: GQSWTTSLTFPNALA*YSVNTGRATVLAAF
Trigger: GAACGCGGCCAGCACGGTCGCGCGTCCGGTGTTCACCGAGTATCAGGCCAGTGCGTTTGGGAATGTCAAGCTGGTGGTCCACGACTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379982.8
ENST00000504949.1
ENST00000506817.1
ENST00000506959.5
ENST00000510226.5
ENST00000510623.1
ENST00000512878.1
CDS-3UTR CAA 90 bp AAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTTCGTGGACCACCAGCTaGACATTCCCAAACGCACTG +
Preference number: 5 (lower is better)
Translates to: KVAVEALGGPDLPKGGNLSWTTS*TFPNAL
Trigger: CAGTGCGTTTGGGAATGTCAAGCTGGTGGTCCACGA...AAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp GCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATACTCGTAATGGTGGGTaGCCTGAAGATTCATGGCTA +
Preference number: 5 (lower is better)
Translates to: AKVAVEALGGPDLPKGGNTRNGG*PEDSWL
Trigger: TAGCCATGAATCTTCAGGCAACCCACCATTACGAGT...ATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp CAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTATGCAACACATTTCTCCCTaGCCAGCCAAGGTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: QWRPWVVQTSPKAGIFTMQHISP*PAKVAV
Trigger: CACTGCCACCTTGGCTGGCAAGGGAGAAATGTGTTG...CATAGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CAA 90 bp GCCAGCCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGAGCCACCATGCTGGCTaGGACAGAATTAATTTCATT +
Preference number: 5 (lower is better)
Translates to: ASQGGSGGPGWSRPPQRRSHHAG*DRINFI
Trigger: AATGAAATTAATTCTGTCCAAGCCAGCATGGTGGCT...CCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp TTAAGGCAACAGCCTGAGGGCCCTGAAACAGACCCTGGACCTCCTGGCAGGGGCCTTGGCCCCGCCTCTTaGAAGATACTCTGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: LRQQPEGPETDPGPPGRGLGPAS*KILWFH
Trigger: GTGAAACCAGAGTATCTTCAAAGAGGCGGGGCCAAG...GCCCCTGCCAGGAGGTCCAGGGTCTGTTTCAGGGCCCTCAGGCTGTTGCCTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR CAA 90 bp CCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCAGCTGCAAAACAGCTTaGCATTCTAGAGTGAAAGCC +
Preference number: 5 (lower is better)
Translates to: PRWQWRPWVVQTSPKAGISCKTA*HSRVKA
Trigger: GGCTTTCACTCTAGAATGCAAAGCTGTTTTGCAGCT...GATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp CAGTCCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCAGAGCCCCGACGGCCGGTaGTCCTGGTGGAATGTGTCC +
Preference number: 5 (lower is better)
Translates to: QSLSFPPLSRGTISELSQSPDGR*SWWNVS
Trigger: GGACACATTCCACCAGGACAACCGGCCGTCGGGGCT...CTGGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CAA 90 bp AAAGGCGGGAATCTTCACTATGTTCTCTTCCCTCCGGTGAGCCTCCTTCTCTTCATGCCAGTTCCCTGCTaGGCATGCTCTGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: KGGNLHYVLFPPVSLLLFMPVPC*ACSAAG
Trigger: CCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCAT...GAAGAGAAGGAGGCTCACCGGAGGGAAGAGAACATAGTGAAGATTCCCGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CAA 90 bp CCAAGGTGGCAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTTCTAACACCCACATaGGTTTCGGTCAGAAGAATT +
Preference number: 5 (lower is better)
Translates to: PRWQWRPWVVQTSPKAGIFLTPT*VSVRRI
Trigger: AATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAA...GATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTGCCACCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS GCA 90 bp GCTGCTTCTGGGAGTGGATTTTCTTCCCTTCCCTTGATCGCAGTATaGTTGGGATTCCTCTTACGTGGCAGTCGTGGTGTCCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: AASGSGFSSLPLIAV*LGFLLRGSRGVQLW
Trigger: CCAGAGCTGGACACCACGACTGCCACGTAAGAGGAATCCCAAGCATACTGCGATCAAGGGAAGGGAAGAAAATCCACTCCCAGAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS CCA 90 bp AACATGGCTGCCATCACTTCACAACGGGCCACCAGGATGGCCCTGTaGGCTGGCACTGTCGTACCTGAAAGGTTCAAAAGGGAAACAAGA +
Preference number: 5 (lower is better)
Translates to: NMAAITSQRATRMAL*AGTVVPERFKRETR
Trigger: TCTTGTTTCCCTTTTGAACCTTTCAGGTACGACAGTGCCAGCCCACAGGGCCATCCTGGTGGCCCGTTGTGAAGTGATGGCAGCCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507186.1
CDS-3UTR CAA 90 bp CAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTATGTGGCACTGTCGTACCTaGAATTTCGAAGACAACATC +
Preference number: 5 (lower is better)
Translates to: QWRPWVVQTSPKAGIFTMWHCRT*NFEDNI
Trigger: GATGTTGTCTTCGAAATTCAAGGTACGACAGTGCCA...CATAGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS GCA 90 bp CTTGGCATGCTCTGCAGCTGGGTAATGATGAACAGCTCACAGATGTaGTGCAGTCTGGACACTTGGTACATCTCGGCACAGATCAGGAGA +
Preference number: 5 (lower is better)
Translates to: LGMLCSWVMMNSSQM*CSLDTWYISAQIRR
Trigger: TCTCCTGATCTGTGCCGAGATGTACCAAGTGTCCAGACTGCAGCACATCTGTGAGCTGTTCATCATTACCCAGCTGCAGAGCATGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379982.8
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS CCA 90 bp TCAAGGTTCATGGATGCCAGTTCCCTGCTTGGCATGCTCTGCAGCTaGGTAATGATGAACAGCTCACAGATGTGCTGCAGTCTGGACACT +
Preference number: 5 (lower is better)
Translates to: SRFMDASSLLGMLCS*VMMNSSQMCCSLDT
Trigger: AGTGTCCAGACTGCAGCACATCTGTGAGCTGTTCATCATTACCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCATCCATGAACCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379982.8
ENST00000503737.1
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS-3UTR CAA 90 bp CAGTCCCTGTCTTTTCCTCCGCTTTCCAGAGGAACTATTTCTGAACTGTCCCAGTCGTGGACCACCAGCTaGACATTCCCAAACGCACTG +
Preference number: 5 (lower is better)
Translates to: QSLSFPPLSRGTISELSQSWTTS*TFPNAL
Trigger: CAGTGCGTTTGGGAATGTCAAGCTGGTGGTCCACGA...CTGGGACAGTTCAGAAATAGTTCCTCTGGAAAGCGGAGGAAAAGACAGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS-3UTR CAA 90 bp CAGTGGAGGCCCTGGGTGGTCCAGACCTCCCCAAAGGCGGGAATCTTCACTATGCAAAGGTTTTCTGGCTaGATAGGTTTTGCAATTCCT +
Preference number: 5 (lower is better)
Translates to: QWRPWVVQTSPKAGIFTMQRFSG*IGFAIP
Trigger: AGGAATTGCAAAACCTATCAAGCCAGAAAACCTTTG...CATAGTGAAGATTCCCGCCTTTGGGGAGGTCTGGACCACCCAGGGCCTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp CGGGAATCTTCACTATGTTCTCTTCCCTCCGGTGAGCCTCCTTCTCTTCCCTTTCTGCAGTCTGGACACTaGGTACATCTCGGCACAGAT +
Preference number: 5 (lower is better)
Translates to: RESSLCSLPSGEPPSLPFLQSGH*VHLGTD
Trigger: ATCTGTGCCGAGATGTACCAAGTGTCCAGACTGCAG...AAAGGGAAGAGAAGGAGGCTCACCGGAGGGAAGAGAACATAGTGAAGATTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp CAGGTGCAAGTCGTGTGGATAAACCTCAGGCTGAGGGAACTTAAGGCAACAGCCTTGATCGCAGTATGCTaGGGATTCCTCTTACGTGGC +
Preference number: 5 (lower is better)
Translates to: QVQVVWINLRLRELKATALIAVC*GFLLRG
Trigger: GCCACGTAAGAGGAATCCCAAGCATACTGCGATCAA...GGCTGTTGCCTTAAGTTCCCTCAGCCTGAGGTTTATCCACACGACTTGCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS GCA 90 bp AATCAGGACACTCTTTGCTTCCATGTAATTACCATTAAACATGGCTaGCATCACTTCACAACGGGCCACCAGGATGGCCCTGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: NQDTLCFHVITIKHG*HHFTTGHQDGPVGW
Trigger: CCAGCCCACAGGGCCATCCTGGTGGCCCGTTGTGAAGTGATGGCAGCCATGTTTAATGGTAATTACATGGAAGCAAAGAGTGTCCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379982.8
ENST00000504179.5
ENST00000507186.1
ENST00000510313.1
CDS GCA 90 bp ACCCTTTGTTTGTCCCTCCAGGCCCGTTCTTCCTCTTCTCCATCCTaGTCCATCCACTGGGAAGCTAGCTTGTATATCGACAGATTCCTT +
Preference number: 5 (lower is better)
Translates to: TLCLSLQARSSSSPS*SIHWEASLYIDRFL
Trigger: AAGGAATCTGTCGATATACAAGCTAGCTTCCCAGTGGATGGAGCAGGATGGAGAAGAGGAAGAACGGGCCTGGAGGGACAAACAAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504949.1
ENST00000510226.5
ENST00000515852.5
CDS TCA 90 bp CACAGTAAAAAGCTGCTTCTGGGAGTGGATTTTCTTCCCTTCCCTTaGTCGCAGTATGCTTGGGATTCCTCTTACGTGGCAGTCGTGGTG +
Preference number: 5 (lower is better)
Translates to: HSKKLLLGVDFLPFP*SQYAWDSSYVAVVV
Trigger: CACCACGACTGCCACGTAAGAGGAATCCCAAGCATACTGCGATCAAGGGAAGGGAAGAAAATCCACTCCCAGAAGCAGCTTTTTACTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS GCA 90 bp ACTATATCAAGGTTCATGGATGCCAGTTCCCTGCTTGGCATGCTCTaGAGCTGGGTAATGATGAACAGCTCACAGATGTGCTGCAGTCTG +
Preference number: 5 (lower is better)
Translates to: TISRFMDASSLLGML*SWVMMNSSQMCCSL
Trigger: CAGACTGCAGCACATCTGTGAGCTGTTCATCATTACCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCATCCATGAACCTTGATATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379982.8
ENST00000503737.1
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS CCA 90 bp TGGGTAATGATGAACAGCTCACAGATGTGCTGCAGTCTGGACACTTaGTACATCTCGGCACAGATCAGGAGACACATGGCCTGGAATATG +
Preference number: 5 (lower is better)
Translates to: WVMMNSSQMCCSLDT*YISAQIRRHMAWNM
Trigger: CATATTCCAGGCCATGTGTCTCCTGATCTGTGCCGAGATGTACCAAGTGTCCAGACTGCAGCACATCTGTGAGCTGTTCATCATTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379982.8
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS-3UTR CAA 90 bp ATTTCCCACCACGAAACAGACATAATTTTGAGGGCTCAGCACAAAATGAAATCAAGCCCCGACGGCCGGTaGTCCTGGTGGAATGTGTCC +
Preference number: 5 (lower is better)
Translates to: ISHHETDIILRAQHKMKSSPDGR*SWWNVS
Trigger: GGACACATTCCACCAGGACAACCGGCCGTCGGGGCT...TGATTTCATTTTGTGCTGAGCCCTCAAAATTATGTCTGTTTCGTGGTGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp CCACACCAACTGGGCACCAGCTTCCAAACCCAACTCCACTTCAGGTCAAACAACAATGAAGTAGCCAGGTaGAAAGGCAATCAGAGTGGT +
Preference number: 5 (lower is better)
Translates to: PHQLGTSFQTQLHFRSNNNEVAR*KGNQSG
Trigger: ACCACTCTGATTGCCTTTCAACCTGGCTACTTCATT...GTTGTTTGACCTGAAGTGGAGTTGGGTTTGGAAGCTGGTGCCCAGTTGGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS CCA 90 bp AAGCAGGTCAACTATATCAAGGTTCATGGATGCCAGTTCCCTGCTTaGCATGCTCTGCAGCTGGGTAATGATGAACAGCTCACAGATGTG +
Preference number: 5 (lower is better)
Translates to: KQVNYIKVHGCQFPA*HALQLGNDEQLTDV
Trigger: CACATCTGTGAGCTGTTCATCATTACCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCATCCATGAACCTTGATATAGTTGACCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379982.8
ENST00000503737.1
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS-3UTR CAA 90 bp CCTTGGAGTTGGCACATTCAACTGTCTGCTGCCTACCAAGGGTCAACCCACAGTGTATTTTTGCCTGTGTaGAGCTTTGAGAGGGATGTA +
Preference number: 5 (lower is better)
Translates to: PWSWHIQLSAAYQGSTHSVFLPV*SFERDV
Trigger: TACATCCCTCTCAAAGCTCAACACAGGCAAAAATAC...ACTGTGGGTTGACCCTTGGTAGGCAGCAGACAGTTGAATGTGCCAACTCCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS CCA 90 bp TCCACTGGGAAGCTAGCTTGTATATCGACAGATTCCTTTGGCCTCTaGCTTCTAGTTAGGTTTAGTCAATGCAGAGATCAGAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: STGKLACISTDSFGL*LLVRFSQCRDQRQQ
Trigger: CTGCTGCCTCTGATCTCTGCATTGACTAAACCTAACTAGAAGCCAGAGGCCAAAGGAATCTGTCGATATACAAGCTAGCTTCCCAGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510226.5
ENST00000515852.5
CDS-3UTR CAA 90 bp CAACACTCCTCCAAAATACTTTCCTATGTAGAAGTCATCAAGGCTGTGGAGTTCTCGTGGACCACCAGCTaGACATTCCCAAACGCACTG +
Preference number: 5 (lower is better)
Translates to: QHSSKILSYVEVIKAVEFSWTTS*TFPNAL
Trigger: CAGTGCGTTTGGGAATGTCAAGCTGGTGGTCCACGA...GAACTCCACAGCCTTGATGACTTCTACATAGGAAAGTATTTTGGAGGAGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510623.1
CDS-3UTR CAA 90 bp GAACAGAAGAGGGCGTCTTTAACAATGACTCGTAATGGTGGGTTGCCTGAAGATTCGCTCCTAGTTCTTTaGCAAGTTGGATCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: EQKRASLTMTRNGGLPEDSLLVL*QVGSLQ
Trigger: CTGAAGGGATCCAACTTGCAAAAGAACTAGGAGCGA...ATCTTCAGGCAACCCACCATTACGAGTCATTGTTAAAGACGCCCTCTTCTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR CAA 90 bp ACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTCTTCGCGCAGAGAACGATCTaGTGGGCCTCTACAACTTTC +
Preference number: 5 (lower is better)
Translates to: TLVSVRRILLEPGGIPFFAQRTI*WASTTF
Trigger: GAAAGTTGTAGAGGCCCACAAGATCGTTCTCTGCGC...GAAGAATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp CGGGAATCTTCACTATGTTCTCTTCCCTCCGGTGAGCCTCCTTCTCTTCCCTTTGAATCAGGACACTCTTaGCTTCCATGTAATTACCAT +
Preference number: 5 (lower is better)
Translates to: RESSLCSLPSGEPPSLPFESGHS*LPCNYH
Trigger: ATGGTAATTACATGGAAGCAAAGAGTGTCCTGATTC...AAAGGGAAGAGAAGGAGGCTCACCGGAGGGAAGAGAACATAGTGAAGATTCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS GCA 90 bp AAACTTGGCCTTTTTAAGCAGGTCAACTATATCAAGGTTCATGGATaGCAGTTCCCTGCTTGGCATGCTCTGCAGCTGGGTAATGATGAA +
Preference number: 5 (lower is better)
Translates to: KLGLFKQVNYIKVHG*QFPAWHALQLGNDE
Trigger: TTCATCATTACCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCATCCATGAACCTTGATATAGTTGACCTGCTTAAAAAGGCCAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379982.8
ENST00000503737.1
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS GCA 90 bp AAAAGAGATTTAATGGCTCACAATTCTGCAGGCTGTACAGGATTCTaGTTCTGGGGAGGCCTCAGGAAATTTCCAATCATGGCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: KRDLMAHNSAGCTGF*FWGGLRKFPIMAEG
Trigger: ACCTTCTGCCATGATTGGAAATTTCCTGAGGCCTCCCCAGAAGCAGAATCCTGTACAGCCTGCAGAATTGTGAGCCATTAAATCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515852.5
CDS-3UTR CAA 90 bp CGGGAATCTTCACTATGTTCTCTTCCCTCCGGTGAGCCTCCTTCTCTTCCCTTTCTTTCTCGATTACATTaGAAACATCCCCAGAATCTT +
Preference number: 5 (lower is better)
Translates to: RESSLCSLPSGEPPSLPFLSRLH*KHPQNL
Trigger: AAGATTCTGGGGATGTTTCAAATGTAATCGAGAAAG...AAAGGGAAGAGAAGGAGGCTCACCGGAGGGAAGAGAACATAGTGAAGATTCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp AACCTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATAGAGATGCCAGTTCCCTGCTaGGCATGCTCTGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: NLLVLQNDQESICSSMIEMPVPC*ACSAAG
Trigger: CCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCAT...CTCTATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CAA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACATGCCAGTTCCCTGCTaGGCATGCTCTGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHMPVPC*ACSAAG
Trigger: CCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCAT...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS CCA 90 bp ATTCTAGTAACGATGAGAGTCACAGTAAAAAGCTGCTTCTGGGAGTaGATTTTCTTCCCTTCCCTTGATCGCAGTATGCTTGGGATTCCT +
Preference number: 5 (lower is better)
Translates to: ILVTMRVTVKSCFWE*IFFPSLDRSMLGIP
Trigger: AGGAATCCCAAGCATACTGCGATCAAGGGAAGGGAAGAAAATCCACTCCCAGAAGCAGCTTTTTACTGTGACTCTCATCGTTACTAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS-3UTR CAA 90 bp CAACACTCCTCCAAAATACTTTCCTATGTAGAAGTCATCAAGGCTGTGGAGTTCTCGCTCCTAGTTCTTTaGCAAGTTGGATCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: QHSSKILSYVEVIKAVEFSLLVL*QVGSLQ
Trigger: CTGAAGGGATCCAACTTGCAAAAGAACTAGGAGCGA...GAACTCCACAGCCTTGATGACTTCTACATAGGAAAGTATTTTGGAGGAGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510623.1
CDS-3UTR CAA 90 bp GGAAATGCAGTATCTCTGTTTATAGCAAAAAGATCCTGGGTAGTTCGGATGATAGCGCAGAGAACGATCTaGTGGGCCTCTACAACTTTC +
Preference number: 5 (lower is better)
Translates to: GNAVSLFIAKRSWVVRMIAQRTI*WASTTF
Trigger: GAAAGTTGTAGAGGCCCACAAGATCGTTCTCTGCGC...TATCATCCGAACTACCCAGGATCTTTTTGCTATAAACAGAGATACTGCATTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR CAA 90 bp AGTTCGGATGATACTGGAATCCTGAATGTCAGTGGGACTCTTCACATTGAAAAGACTCGTAATGGTGGGTaGCCTGAAGATTCATGGCTA +
Preference number: 5 (lower is better)
Translates to: SSDDTGILNVSGTLHIEKTRNGG*PEDSWL
Trigger: TAGCCATGAATCTTCAGGCAACCCACCATTACGAGT...CTTTTCAATGTGAAGAGTCCCACTGACATTCAGGATTCCAGTATCATCCGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502541.1
CDS-3UTR CAA 90 bp ACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTAGCTGCAAAACAGCTTaGCATTCTAGAGTGAAAGCC +
Preference number: 5 (lower is better)
Translates to: THIGFGQKNFTGTWRYPISCKTA*HSRVKA
Trigger: GGCTTTCACTCTAGAATGCAAAGCTGTTTTGCAGCT...AATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000514198.1
CDS-3UTR CAA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACCTGCAGTCTGGACACTaGGTACATCTCGGCACAGAT +
Preference number: 5 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHLQSGH*VHLGTD
Trigger: ATCTGTGCCGAGATGTACCAAGTGTCCAGACTGCAG...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CAA 90 bp ACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGGAGGTATCCCATTTTTCTAACACCCACATaGGTTTCGGTCAGAAGAATT +
Preference number: 5 (lower is better)
Translates to: THIGFGQKNFTGTWRYPIFLTPT*VSVRRI
Trigger: AATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAA...AATGGGATACCTCCAGGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000514198.1
CDS-3UTR CAA 90 bp GGTAATTTTTCTAACACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCTGTGACATCTGGATGTaGGTGTCACTCACACAGGTA +
Preference number: 5 (lower is better)
Translates to: GNFSNTHIGFGQKNFTGTCDIWM*VSLTQV
Trigger: TACCTGTGTGAGTGACACCAACATCCAGATGTCACA...GGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAAAATTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS GCA 90 bp GAAAGTCTCTTTGGAAACACCATAAACGGGAATCAGGACACTCTTTaGTTCCATGTAATTACCATTAAACATGGCTGCCATCACTTCACA +
Preference number: 5 (lower is better)
Translates to: ESLFGNTINGNQDTL*FHVITIKHGCHHFT
Trigger: TGTGAAGTGATGGCAGCCATGTTTAATGGTAATTACATGGAAGCAAAGAGTGTCCTGATTCCCGTTTATGGTGTTTCCAAAGAGACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379982.8
ENST00000504179.5
ENST00000507186.1
ENST00000510313.1
CDS TCA 90 bp ATAAAAGCTCCAGGTTACATTACTAAGCAACGACATTTCCGGGAGTaGATATACTTCCTGTATTCCGCAAGCTGCTTCAAGTACATATTC +
Preference number: 5 (lower is better)
Translates to: IKAPGYITKQRHFRE*IYFLYSASCFKYIF
Trigger: GAATATGTACTTGAAGCAGCTTGCGGAATACAGGAAGTATATTCACTCCCGGAAATGTCGTTGCTTAGTAATGTAACCTGGAGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379982.8
ENST00000504179.5
ENST00000514198.1
CDS TCA 90 bp GAGATTGTAAGTAACCAGAACCACTTGACAAGATACCTGAATAAATaGAGCGAAGGATGTCTGATAAACAAGAACAGAAGAGGGCGTCTT +
Preference number: 5 (lower is better)
Translates to: EIVSNQNHLTRYLNK*SEGCLINKNRRGRL
Trigger: AAGACGCCCTCTTCTGTTCTTGTTTATCAGACATCCTTCGCTTCATTTATTCAGGTATCTTGTCAAGTGGTTCTGGTTACTTACAATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504949.1
CDS TCA 90 bp TCTCAGATGGTAGGTAAAGACCACTGTAAAACTAACCAGTACCCTTaGGTGTCACAGGCACATTTCATTTCCAAAGCTTATGAGATTGTA +
Preference number: 5 (lower is better)
Translates to: SQMVGKDHCKTNQYP*VSQAHFISKAYEIV
Trigger: TACAATCTCATAAGCTTTGGAAATGAAATGTGCCTGTGACACTCAAGGGTACTGGTTAGTTTTACAGTGGTCTTTACCTACCATCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504949.1
CDS CCA 90 bp AGGAGTCTGTGTACAGGTATTCTAAAAATGACAAGAAAGTCTCTTTaGAAACACCATAAACGGGAATCAGGACACTCTTTGCTTCCATGT +
Preference number: 5 (lower is better)
Translates to: RSLCTGILKMTRKSL*KHHKRESGHSLLPC
Trigger: ACATGGAAGCAAAGAGTGTCCTGATTCCCGTTTATGGTGTTTCCAAAGAGACTTTCTTGTCATTTTTAGAATACCTGTACACAGACTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379982.8
ENST00000504179.5
ENST00000507186.1
ENST00000510313.1
CDS-3UTR CAA 90 bp ACCAACCTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATATCGCTCCTAGTTCTTTaGCAAGTTGGATCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: TNLLVLQNDQESICSSMISLLVL*QVGSLQ
Trigger: CTGAAGGGATCCAACTTGCAAAAGAACTAGGAGCGA...TATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAGGTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp GGTAATTTTTCTAACACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCGATAAAGTGGCTCAATaGGGTTGTCCAGATGAAAAG +
Preference number: 5 (lower is better)
Translates to: GNFSNTHIGFGQKNFTGTDKVAQ*GCPDEK
Trigger: CTTTTCATCTGGACAACCCAATTGAGCCACTTTATC...GGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAAAATTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp ATATACAAAGGGTTAAATAGGGTAAAGACTTTGGCCAAGAAAGGAAAGGCCTTAAATAGGGTAAAGACTTaGGCCAAGAAAGGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: IYKGLNRVKTLAKKGKALNRVKT*AKKGKA
Trigger: GGCCTTTCCTTTCTTGGCCAAAGTCTTTACCCTATT...TAAGGCCTTTCCTTTCTTGGCCAAAGTCTTTACCCTATTTAACCCTTTGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACTGGCACTGTCGTACCTaGAATTTCGAAGACAACATC +
Preference number: 5 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHWHCRT*NFEDNI
Trigger: GATGTTGTCTTCGAAATTCAAGGTACGACAGTGCCA...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CAA 90 bp ACCAACCTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATAAATGAAGTAGCCAGGTaGAAAGGCAATCAGAGTGGT +
Preference number: 5 (lower is better)
Translates to: TNLLVLQNDQESICSSMINEVAR*KGNQSG
Trigger: ACCACTCTGATTGCCTTTCAACCTGGCTACTTCATT...TATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAGGTTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CAA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACAATGAAGTAGCCAGGTaGAAAGGCAATCAGAGTGGT +
Preference number: 5 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHNEVAR*KGNQSG
Trigger: ACCACTCTGATTGCCTTTCAACCTGGCTACTTCATT...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CAA 90 bp GGTAATTTTTCTAACACCCACATTGGTTTCGGTCAGAAGAATTTTACTGGAACCCTGAAATTCAGGCTTTaGACTGAAGATGAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: GNFSNTHIGFGQKNFTGTLKFRL*TEDEVV
Trigger: AACTACCTCATCTTCAGTCAAAAGCCTGAATTTCAG...GGTTCCAGTAAAATTCTTCTGACCGAAACCAATGTGGGTGTTAGAAAAATTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp CAAGAAAACATAGGATATTTCCCACCACGAAACAGACATAATTTTGAGGGCTCATTTACTTTGGCAGTGTaGGTATACATACAAGGGCTA +
Preference number: 5 (lower is better)
Translates to: QENIGYFPPRNRHNFEGSFTLAV*VYIQGL
Trigger: TAGCCCTTGTATGTATACCAACACTGCCAAAGTAAA...TGAGCCCTCAAAATTATGTCTGTTTCGTGGTGGGAAATATCCTATGTTTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp CCCTATAATATGAACAGTGAGCAGTCAGAAATATACAAAGGGTTAAATAGGGTATTCTGGTTGTTCAAGTaGAGGTGGTCTAATTCCATG +
Preference number: 5 (lower is better)
Translates to: PYNMNSEQSEIYKGLNRVFWLFK*RWSNSM
Trigger: CATGGAATTAGACCACCTCAACTTGAACAACCAGAA...TACCCTATTTAACCCTTTGTATATTTCTGACTGCTCACTGTTCATATTATAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS TCA 90 bp TCTCGATTACATTTGAAACATCCCCAGAATCTTTCAACTTCTTCCTaGTATCTTCTTCCAATTCTTCCCACTGAAAAGCACCTGAATAAA +
Preference number: 5 (lower is better)
Translates to: SRLHLKHPQNLSTSS*YLLPILPTEKHLNK
Trigger: TTTATTCAGGTGCTTTTCAGTGGGAAGAATTGGAAGAAGATATCAGGAAGAAGTTGAAAGATTCTGGGGATGTTTCAAATGTAATCGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACGAATCAGGACACTCTTaGCTTCCATGTAATTACCAT +
Preference number: 5 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHESGHS*LPCNYH
Trigger: ATGGTAATTACATGGAAGCAAAGAGTGTCCTGATTC...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CAA 90 bp CTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATAGAGCAACTGAAATTCAGGCTTTaGACTGAAGATGAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: LLVLQNDQESICSSMIEQLKFRL*TEDEVV
Trigger: AACTACCTCATCTTCAGTCAAAAGCCTGAATTTCAG...TTGCTCTATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000503737.1
CDS-3UTR CAA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACCTGAAATTCAGGCTTTaGACTGAAGATGAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHLKFRL*TEDEVV
Trigger: AACTACCTCATCTTCAGTCAAAAGCCTGAATTTCAG...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS-3UTR CAA 90 bp AAGGTGTTTGAGCAAGAAAACATAGGATATTTCCCACCACGAAACAGACATAATAAACACTGTCATCAATaGAGAACTAAGTGGCATTTC +
Preference number: 5 (lower is better)
Translates to: KVFEQENIGYFPPRNRHNKHCHQ*RTKWHF
Trigger: GAAATGCCACTTAGTTCTCAATTGATGACAGTGTTT...ATTATGTCTGTTTCGTGGTGGGAAATATCCTATGTTTTCTTGCTCAAACACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp CTCCTGGTCTTACAGAATGATCAAGAAAGTATTTGTTCATCTATGATAGAGCAATCATTAACGTTGTATTaGATCACAATGATGTCAGCG +
Preference number: 5 (lower is better)
Translates to: LLVLQNDQESICSSMIEQSLTLY*ITMMSA
Trigger: CGCTGACATCATTGTGATCAAATACAACGTTAATGA...TTGCTCTATCATAGATGAACAAATACTTTCTTGATCATTCTGTAAGACCAGGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379982.8
CDS-3UTR CAA 90 bp TTAAGGCACTTATGTAACACAGGTGACTATAAATTGTTTCCTCAATTACCACACACAGGTGACTATAAATaGTTTCCTCAATTACCACAC +
Preference number: 5 (lower is better)
Translates to: LRHLCNTGDYKLFPQLPHTGDYK*FPQLPH
Trigger: GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGT...GTGTGGTAATTGAGGAAACAATTTATAGTCACCTGTGTTACATAAGTGCCTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510313.1
CDS CCA 72 bp ACATCGCCGGGCGCGGGACCGCCGCACAGCCCCAAGTaGACGCAGCTGACCGCAGTCCCCTCTCCGCCGCGC +
Preference number: 6 (lower is better)
Translates to: TSPGAGPPHSPK*TQLTAVPSPPR
Trigger: GCGCGGCGGAGAGGGGACTGCGGTCAGCTGCGTCCACTTGGGGCTGTGCGGCGGTCCCGCGCCCGGCGATGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000506817.1
CDS GCA 72 bp CGGGGACCAGGGCGGGCTAGCGGGCGGGGGATAAGCTaGCGCTACTCAGGGAGTGCCCGGGAACATCGCCGG +
Preference number: 6 (lower is better)
Translates to: RGPGRASGRGIS*RYSGSAREHRR
Trigger: CCGGCGATGTTCCCGGGCACTCCCTGAGTAGCGGCAGCTTATCCCCCGCCCGCTAGCCCGCCCTGGTCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379982.8
ENST00000506817.1
CDS TCA 72 bp TGGACCACCAGCTTGACATTCCCAAACGCACTGGCCTaGTACTCGGTGAACACCGGACGCGCGACCGTGCTG +
Preference number: 6 (lower is better)
Translates to: WTTSLTFPNALA*YSVNTGRATVL
Trigger: CAGCACGGTCGCGCGTCCGGTGTTCACCGAGTATCAGGCCAGTGCGTTTGGGAATGTCAAGCTGGTGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379982.8
ENST00000504949.1
ENST00000506817.1
ENST00000506959.5
ENST00000510226.5
ENST00000510623.1
ENST00000512878.1
CDS CCA 72 bp GAGCAGCTGCTCTTCCTTACCCAGACGGGACAGTCGTaGACCACCAGCTTGACATTCCCAAACGCACTGGCC +
Preference number: 6 (lower is better)
Translates to: EQLLFLTQTGQS*TTSLTFPNALA
Trigger: GGCCAGTGCGTTTGGGAATGTCAAGCTGGTGGTCCACGACTGTCCCGTCTGGGTAAGGAAGAGCAGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS GCA 72 bp GAAAGAAAAGCTTCTTCAGCCTCAGCGCGGAGCAGCTaGTCTTCCTTACCCAGACGGGACAGTCGTGGACCA +
Preference number: 6 (lower is better)
Translates to: ERKASSASARSS*SSLPRRDSRGP
Trigger: TGGTCCACGACTGTCCCGTCTGGGTAAGGAAGAGCAGCTGCTCCGCGCTGAGGCTGAAGAAGCTTTTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506817.1
CDS CCA 72 bp GGATTCCTCTTACGTGGCAGTCGTGGTGTCCAGCTCTaGCCTTGGCCCCGCCTCTTTGAAGATACTCTGGTT +
Preference number: 6 (lower is better)
Translates to: GFLLRGSRGVQL*PWPRLFEDTLV
Trigger: AACCAGAGTATCTTCAAAGAGGCGGGGCCAAGGCCAGAGCTGGACACCACGACTGCCACGTAAGAGGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS CCA 72 bp CAATCACTGTCAAATATGTCCCAGACGGGACAGTCGTaGACCACCAGCTTGACATTCCCAAACGCACTGGCC +
Preference number: 6 (lower is better)
Translates to: QSLSNMSQTGQS*TTSLTFPNALA
Trigger: GGCCAGTGCGTTTGGGAATGTCAAGCTGGTGGTCCACGACTGTCCCGTCTGGGACATATTTGACAGTGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379982.8
ENST00000504949.1
ENST00000506959.5
ENST00000510226.5
ENST00000512878.1
CDS GCA 72 bp CTCTGCAGCTGGGTAATGATGAACAGCTCACAGATGTaGTGCAGTCTGGACACTTGGTACATCTCGGCACAG +
Preference number: 6 (lower is better)
Translates to: LCSWVMMNSSQM*CSLDTWYISAQ
Trigger: CTGTGCCGAGATGTACCAAGTGTCCAGACTGCAGCACATCTGTGAGCTGTTCATCATTACCCAGCTGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379982.8
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS GCA 72 bp AGGTTCATGGATGCCAGTTCCCTGCTTGGCATGCTCTaGAGCTGGGTAATGATGAACAGCTCACAGATGTGC +
Preference number: 6 (lower is better)
Translates to: RFMDASSLLGML*SWVMMNSSQMC
Trigger: GCACATCTGTGAGCTGTTCATCATTACCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCATCCATGAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379982.8
ENST00000503737.1
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS GCA 72 bp GGGAGTGGATTTTCTTCCCTTCCCTTGATCGCAGTATaGTTGGGATTCCTCTTACGTGGCAGTCGTGGTGTC +
Preference number: 6 (lower is better)
Translates to: GSGFSSLPLIAV*LGFLLRGSRGV
Trigger: GACACCACGACTGCCACGTAAGAGGAATCCCAAGCATACTGCGATCAAGGGAAGGGAAGAAAATCCACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS CCA 72 bp ATGAACAGCTCACAGATGTGCTGCAGTCTGGACACTTaGTACATCTCGGCACAGATCAGGAGACACATGGCC +
Preference number: 6 (lower is better)
Translates to: MNSSQMCCSLDT*YISAQIRRHMA
Trigger: GGCCATGTGTCTCCTGATCTGTGCCGAGATGTACCAAGTGTCCAGACTGCAGCACATCTGTGAGCTGTTCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379982.8
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS CCA 72 bp ATGGATGCCAGTTCCCTGCTTGGCATGCTCTGCAGCTaGGTAATGATGAACAGCTCACAGATGTGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: MDASSLLGMLCS*VMMNSSQMCCS
Trigger: ACTGCAGCACATCTGTGAGCTGTTCATCATTACCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCATCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379982.8
ENST00000503737.1
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS CAA 72 bp GATGAACAGCTCACAGATGTGCTGCAGTCTGGACACTaGGTACATCTCGGCACAGATCAGGAGACACATGGC +
Preference number: 6 (lower is better)
Translates to: DEQLTDVLQSGH*VHLGTDQETHG
Trigger: GCCATGTGTCTCCTGATCTGTGCCGAGATGTACCAAGTGTCCAGACTGCAGCACATCTGTGAGCTGTTCATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379982.8
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS CAA 72 bp GCGCCACGATGTGGATGGACCTTTTCTTTTAACCCTTaGTTTGTCCCTCCAGGCCCGTTCTTCCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: APRCGWTFSFNP*FVPPGPFFLFS
Trigger: GGAGAAGAGGAAGAACGGGCCTGGAGGGACAAACAAAGGGTTAAAAGAAAAGGTCCATCCACATCGTGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504949.1
ENST00000510226.5
ENST00000515852.5
CDS CAA 72 bp AGTGGATTTTCTTCCCTTCCCTTGATCGCAGTATGCTaGGGATTCCTCTTACGTGGCAGTCGTGGTGTCCAG +
Preference number: 6 (lower is better)
Translates to: SGFSSLPLIAVC*GFLLRGSRGVQ
Trigger: CTGGACACCACGACTGCCACGTAAGAGGAATCCCAAGCATACTGCGATCAAGGGAAGGGAAGAAAATCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS CAA 90 bp CTGGGTAATGATGAACAGCTCACAGATGTGCTGCAGTCTGGACACTaGGTACATCTCGGCACAGATCAGGAGACACATGGCCTGGAATAT +
Preference number: 6 (lower is better)
Translates to: LGNDEQLTDVLQSGH*VHLGTDQETHGLEY
Trigger: ATATTCCAGGCCATGTGTCTCCTGATCTGTGCCGAGATGTACCAAGTGTCCAGACTGCAGCACATCTGTGAGCTGTTCATCATTACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379982.8
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS CCA 72 bp TGGTACATCTCGGCACAGATCAGGAGACACATGGCCTaGAATATGCCAGCTGATGAGAAAAGGGACATGAGA +
Preference number: 6 (lower is better)
Translates to: WYISAQIRRHMA*NMPADEKRDMR
Trigger: TCTCATGTCCCTTTTCTCATCAGCTGGCATATTCCAGGCCATGTGTCTCCTGATCTGTGCCGAGATGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511558.1
CDS CCA 72 bp ACACTTGGTACATCTCGGCACAGATCAGGAGACACATaGCCTGGAATATGCCAGCTGATGAGAAAAGGGACA +
Preference number: 6 (lower is better)
Translates to: TLGTSRHRSGDT*PGICQLMRKGT
Trigger: TGTCCCTTTTCTCATCAGCTGGCATATTCCAGGCCATGTGTCTCCTGATCTGTGCCGAGATGTACCAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511558.1
CDS CCA 72 bp GCTCACAATTCTGCAGGCTGTACAGGATTCTGCTTCTaGGGAGGCCTCAGGAAATTTCCAATCATGGCAGAA +
Preference number: 6 (lower is better)
Translates to: AHNSAGCTGFCF*GGLRKFPIMAE
Trigger: TTCTGCCATGATTGGAAATTTCCTGAGGCCTCCCCAGAAGCAGAATCCTGTACAGCCTGCAGAATTGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515852.5
CDS CAA 72 bp TCTTCTCCATCCTGCTCCATCCACTGGGAAGCTAGCTaGTATATCGACAGATTCCTTTGGCCTCTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: SSPSCSIHWEAS*YIDRFLWPLAS
Trigger: AGAAGCCAGAGGCCAAAGGAATCTGTCGATATACAAGCTAGCTTCCCAGTGGATGGAGCAGGATGGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504949.1
ENST00000510226.5
ENST00000515852.5
CDS GCA 72 bp ACTCTTTGCTTCCATGTAATTACCATTAAACATGGCTaGCATCACTTCACAACGGGCCACCAGGATGGCCCT +
Preference number: 6 (lower is better)
Translates to: TLCFHVITIKHG*HHFTTGHQDGP
Trigger: AGGGCCATCCTGGTGGCCCGTTGTGAAGTGATGGCAGCCATGTTTAATGGTAATTACATGGAAGCAAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379982.8
ENST00000504179.5
ENST00000507186.1
ENST00000510313.1
CDS GCA 72 bp CTTTTTAAGCAGGTCAACTATATCAAGGTTCATGGATaGCAGTTCCCTGCTTGGCATGCTCTGCAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: LFKQVNYIKVHG*QFPAWHALQLG
Trigger: ACCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCATCCATGAACCTTGATATAGTTGACCTGCTTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379982.8
ENST00000503737.1
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS CCA 72 bp AACTATATCAAGGTTCATGGATGCCAGTTCCCTGCTTaGCATGCTCTGCAGCTGGGTAATGATGAACAGCTC +
Preference number: 6 (lower is better)
Translates to: NYIKVHGCQFPA*HALQLGNDEQL
Trigger: GAGCTGTTCATCATTACCCAGCTGCAGAGCATGCCAAGCAGGGAACTGGCATCCATGAACCTTGATATAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379982.8
ENST00000503737.1
ENST00000504179.5
ENST00000510313.1
ENST00000511558.1
CDS GCA 72 bp TTAATGGCTCACAATTCTGCAGGCTGTACAGGATTCTaGTTCTGGGGAGGCCTCAGGAAATTTCCAATCATG +
Preference number: 6 (lower is better)
Translates to: LMAHNSAGCTGF*FWGGLRKFPIM
Trigger: CATGATTGGAAATTTCCTGAGGCCTCCCCAGAAGCAGAATCCTGTACAGCCTGCAGAATTGTGAGCCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515852.5
CDS CCA 72 bp AAACATGCTGACCGTAGCATCCACCATAGAATAGAATaGTTAGGAAAAGCCTCGAGGGAGTCAGCATTCTGC +
Preference number: 6 (lower is better)
Translates to: KHADRSIHHRIE*LGKASRESAFC
Trigger: GCAGAATGCTGACTCCCTCGAGGCTTTTCCTAACCATTCTATTCTATGGTGGATGCTACGGTCAGCATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511558.1
CDS GCA 72 bp TCCTTTGGCCTCTGGCTTCTAGTTAGGTTTAGTCAATaGAGAGATCAGAGGCAGCAGAATGAGACAGGATAT +
Preference number: 6 (lower is better)
Translates to: SFGLWLLVRFSQ*RDQRQQNETGY
Trigger: ATATCCTGTCTCATTCTGCTGCCTCTGATCTCTGCATTGACTAAACCTAACTAGAAGCCAGAGGCCAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510226.5
ENST00000515852.5
CDS CCA 72 bp ACGATGAGAGTCACAGTAAAAAGCTGCTTCTGGGAGTaGATTTTCTTCCCTTCCCTTGATCGCAGTATGCTT +
Preference number: 6 (lower is better)
Translates to: TMRVTVKSCFWE*IFFPSLDRSML
Trigger: AAGCATACTGCGATCAAGGGAAGGGAAGAAAATCCACTCCCAGAAGCAGCTTTTTACTGTGACTCTCATCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS CCA 72 bp CTAGTAACGATGAGAGTCACAGTAAAAAGCTGCTTCTaGGAGTGGATTTTCTTCCCTTCCCTTGATCGCAGT +
Preference number: 6 (lower is better)
Translates to: LVTMRVTVKSCF*EWIFFPSLDRS
Trigger: ACTGCGATCAAGGGAAGGGAAGAAAATCCACTCCCAGAAGCAGCTTTTTACTGTGACTCTCATCGTTACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513091.1
CDS CCA 72 bp AGTTATAATTCTGCAGGCTGTACAGGATTCTGCTTCTaGGGAGGCCTCAGGAAATTTCCAATCATGGCAGAA +
Preference number: 6 (lower is better)
Translates to: SYNSAGCTGFCF*GGLRKFPIMAE
Trigger: TTCTGCCATGATTGGAAATTTCCTGAGGCCTCCCCAGAAGCAGAATCCTGTACAGCCTGCAGAATTATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510226.5
CDS TCA 72 bp CCAGGTTACATTACTAAGCAACGACATTTCCGGGAGTaGATATACTTCCTGTATTCCGCAAGCTGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: PGYITKQRHFRE*IYFLYSASCFK
Trigger: CTTGAAGCAGCTTGCGGAATACAGGAAGTATATTCACTCCCGGAAATGTCGTTGCTTAGTAATGTAACCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379982.8
ENST00000504179.5
ENST00000514198.1
CDS GCA 72 bp GCAAGCTGCTTCAAGTACATATTCGACGGCCATCTGTaGTTTTCAACAAAACTGCGTTCTTCCACTGAAAGA +
Preference number: 6 (lower is better)
Translates to: ASCFKYIFDGHL*FSTKLRSSTER
Trigger: TCTTTCAGTGGAAGAACGCAGTTTTGTTGAAAAGCACAGATGGCCGTCGAATATGTACTTGAAGCAGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379982.8
ENST00000503737.1
ENST00000504179.5
CDS GCA 72 bp GCAAGCTGCTTCAAGTACATATTCGACGGCCATCTGTaGTTTTCAACAAAACTGCGTTCTTCCACTGAAGTT +
Preference number: 6 (lower is better)
Translates to: ASCFKYIFDGHL*FSTKLRSSTEV
Trigger: AACTTCAGTGGAAGAACGCAGTTTTGTTGAAAAGCACAGATGGCCGTCGAATATGTACTTGAAGCAGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514198.1
CDS TCA 72 bp TGCCTTTTTATTACTAAGCAACGACATTTCCGGGAGTaGATATACTTCCTGTATTCCGCAAGCTGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: CLFITKQRHFRE*IYFLYSASCFK
Trigger: CTTGAAGCAGCTTGCGGAATACAGGAAGTATATTCACTCCCGGAAATGTCGTTGCTTAGTAATAAAAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503737.1
CDS GCA 72 bp TTCCTTAGGCAATTAATCTTTAAGAACTGTATGGGCTaGCTGTCAGTGAACAACACTGCTCTCTTTGGCATT +
Preference number: 6 (lower is better)
Translates to: FLRQLIFKNCMG*LSVNNTALFGI
Trigger: AATGCCAAAGAGAGCAGTGTTGTTCACTGACAGGCAGCCCATACAGTTCTTAAAGATTAATTGCCTAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504179.5
CDS TCA 72 bp GTAGGTAAAGACCACTGTAAAACTAACCAGTACCCTTaGGTGTCACAGGCACATTTCATTTCCAAAGCTTAT +
Preference number: 6 (lower is better)
Translates to: VGKDHCKTNQYP*VSQAHFISKAY
Trigger: ATAAGCTTTGGAAATGAAATGTGCCTGTGACACTCAAGGGTACTGGTTAGTTTTACAGTGGTCTTTACCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504949.1
CDS TCA 72 bp GTACCTGAAAGGTTCAAAAGGGAAACAAGAAACAAGTaGGATAAACCTGCAGGGTTATTCCAGCAATTTTCC +
Preference number: 6 (lower is better)
Translates to: VPERFKRETRNK*DKPAGLFQQFS
Trigger: GGAAAATTGCTGGAATAACCCTGCAGGTTTATCTCACTTGTTTCTTGTTTCCCTTTTGAACCTTTCAGGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507186.1
CDS TCA 72 bp AGTAACCAGAACCACTTGACAAGATACCTGAATAAATaGAGCGAAGGATGTCTGATAAACAAGAACAGAAGA +
Preference number: 6 (lower is better)
Translates to: SNQNHLTRYLNK*SEGCLINKNRR
Trigger: TCTTCTGTTCTTGTTTATCAGACATCCTTCGCTTCATTTATTCAGGTATCTTGTCAAGTGGTTCTGGTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504949.1