RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RHOBTB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000008853

Ensembl transcript IDs: ENST00000251822.7, ENST00000517528.1, ENST00000518534.1, ENST00000519210.1, ENST00000519685.5, ENST00000522948.5, ENST00000523918.1, ENST00000524077.5

Found 657 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGTGGTTCCCGTTCTGCTCCACAGGGCTCAGCTCCTCTCTGGCTaGGCCACGGTGGCTGGTAAGAAGAGCTCCACCCTCTGGGTCCTG +
Preference number: 1 (lower is better)
Translates to: QVVPVLLHRAQLLSG*ATVAGKKSSTLWVL
Trigger: CAGGACCCAGAGGGTGGAGCTCTTCTTACCAGCCACCGTGGCTCAGCCAGAGAGGAGCTGAGCCCTGTGGAGCAGAACGGGAACCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR GCA 90 bp CCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTaGAGGTGGTTCCCGTTCTGCTCCACAGGGCTCAGCTCCTCTCTG +
Preference number: 1 (lower is better)
Translates to: PPSSCLPSCFGSGDL*RWFPFCSTGLSSSL
Trigger: CAGAGAGGAGCTGAGCCCTGTGGAGCAGAACGGGAACCACCTGCAGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR CCA 90 bp AGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTGCAGGTaGTTCCCGTTCTGCTCCACAGGGCTCAGCTCCTCTCTGGCTGAG +
Preference number: 1 (lower is better)
Translates to: SSCLPSCFGSGDLCR*FPFCSTGLSSSLAE
Trigger: CTCAGCCAGAGAGGAGCTGAGCCCTGTGGAGCAGAACGGGAACCACCTGCAGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR GCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTaGTTTGGGTCTGGGGACCTCTGCAGGTGGTTCCCGTTCTGCTCC +
Preference number: 1 (lower is better)
Translates to: KMPGLFAPPSSCLPS*FGSGDLCRWFPFCS
Trigger: GGAGCAGAACGGGAACCACCTGCAGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR CCA 90 bp CCCTGGGACGGAGGGACACTGGCAGGATACAGGCCTTTCCACGTCTaGCCTTTTGCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGG +
Preference number: 1 (lower is better)
Translates to: PWDGGTLAGYRPFHV*PFAAAPQDVEALSW
Trigger: CCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGCAAAAGGCCAGACGTGGAAAGGCCTGTATCCTGCCAGTGTCCCTCCGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR CCA 90 bp ATTCTCAGGTCTGTGCTAGCACAGCCCCCTGGGACGGAGGGACACTaGCAGGATACAGGCCTTTCCACGTCTGGCCTTTTGCAGCTGCAC +
Preference number: 1 (lower is better)
Translates to: ILRSVLAQPPGTEGH*QDTGLSTSGLLQLH
Trigger: GTGCAGCTGCAAAAGGCCAGACGTGGAAAGGCCTGTATCCTGCCAGTGTCCCTCCGTCCCAGGGGGCTGTGCTAGCACAGACCTGAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR GCA 90 bp CGGAGGGACACTGGCAGGATACAGGCCTTTCCACGTCTGGCCTTTTaGAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAA +
Preference number: 1 (lower is better)
Translates to: RRDTGRIQAFPRLAF*SCTPGCRSLELGSE
Trigger: TTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGCAAAAGGCCAGACGTGGAAAGGCCTGTATCCTGCCAGTGTCCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR GCA 90 bp GACACTGGCAGGATACAGGCCTTTCCACGTCTGGCCTTTTGCAGCTaGACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCA +
Preference number: 1 (lower is better)
Translates to: DTGRIQAFPRLAFCS*TPGCRSLELGSEGS
Trigger: TGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGCAAAAGGCCAGACGTGGAAAGGCCTGTATCCTGCCAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR TCA 90 bp AGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTaGATGACCTGTGTCCCCATTCTCAGGTCTGTGCTAGCACAGCCC +
Preference number: 1 (lower is better)
Translates to: SFLLHQEALLPGLEL*MTCVPILRSVLAQP
Trigger: GGGCTGTGCTAGCACAGACCTGAGAATGGGGACACAGGTCATTCAGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR TCA 90 bp GCAGGGTCAGGGCCTCCGCAGTCAGAGAAGTGCCGAGTCCTTTCCTaGAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACCTCCT +
Preference number: 1 (lower is better)
Translates to: AGSGPPQSEKCRVLS*KALESILQPKSSPP
Trigger: AGGAGGTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGCACTTCTCTGACTGCGGAGGCCCTGACCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR GCA 90 bp GAGGCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATaGCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCT +
Preference number: 1 (lower is better)
Translates to: EAFPLTLGLSNPEIK*QGSSLLQAVVSRPA
Trigger: AGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR GCA 90 bp GGTCGCCGTGCACTCATTCCTACTTCCTTCTCCACCTGTCCCAGCTaGTTCCTTTGGTTACCATCTCCAAATCTGAGGGTAAAGGAGGGG +
Preference number: 1 (lower is better)
Translates to: GRRALIPTSFSTCPS*FLWLPSPNLRVKEG
Trigger: CCCCTCCTTTACCCTCAGATTTGGAGATGGTAACCAAAGGAAGCAGCTGGGACAGGTGGAGAAGGAAGTAGGAATGAGTGCACGGCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR CCA 90 bp GGCCTCCGCAGTCAGAGAAGTGCCGAGTCCTTTCCTGAAAGGCATTaGAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGG +
Preference number: 1 (lower is better)
Translates to: GLRSQRSAESFPERH*SRFCNLNLHLLIMG
Trigger: CCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGCACTTCTCTGACTGCGGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR GCA 90 bp CAGAGAAGTGCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTaGAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTAT +
Preference number: 1 (lower is better)
Translates to: QRSAESFPERHWSRF*NLNLHLLIMGASVY
Trigger: ATAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGCACTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR GCA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCTGGGCTGCGCTGAGCTaGAGGGAGGCCGAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPWAALS*REAEQP
Trigger: AGGCTGCTCGGCCTCCCTGCAGCTCAGCGCAGCCCA...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR CCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCCACCCTCTGGGTCCTaGTTACGTGGGCCCCCTGGT +
Preference number: 2 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSPPSGS*LRGPPG
Trigger: ACCAGGGGGCCCACGTAACCAGGACCCAGAGGGTGG...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTGGGACGGAGGGACACTaGCAGGATACAGGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSGTEGH*QDTGLS
Trigger: GGAAAGGCCTGTATCCTGCCAGTGTCCCTCCGTCCC...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCCTGCCCCATGGGGGCTaGGAGCTAGTTTCAATCCCC +
Preference number: 2 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPLPHGG*ELVSIP
Trigger: GGGGATTGAAACTAGCTCCCAGCCCCCATGGGGCAG...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR GCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCCACGTCTGGCCTTTTaGAGCTGCACCCCAGGATGT +
Preference number: 2 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSPRLAF*SCTPGC
Trigger: ACATCCTGGGGTGCAGCTGCAAAAGGCCAGACGTGG...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTGGCTCAGCTCCTCTCTaGCTGAGCCACGGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSGSAPL*LSHGGW
Trigger: CCAGCCACCGTGGCTCAGCCAGAGAGGAGCTGAGCC...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTGCCCTCGGAGCCAGCTaGCAGGGTCAGGGCCTCCGC +
Preference number: 2 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSALGAS*QGQGLR
Trigger: GCGGAGGCCCTGACCCTGCCAGCTGGCTCCGAGGGC...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR TCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCGCCTGGAGCTCTGAATaGCCTGTGTCCCCATTCTCA +
Preference number: 2 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLAWSSE*PVSPFS
Trigger: TGAGAATGGGGACACAGGTCATTCAGAGCTCCAGGC...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGGCTCAGCTCCTCTCTaGCTGAGCCACGGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: GKIWPTGAGPSRITSACWGSAPL*LSHGGW
Trigger: CCAGCCACCGTGGCTCAGCCAGAGAGGAGCTGAGCC...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGCACACAGAGAAGCCCTaGAGGCTGGGAGGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: IWPTGAGPSRITSACWEWHTEKP*RLGGFP
Trigger: GGGAAAGCCTCCCAGCCTCCAGGGCTTCTCTGTGTG...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTCTGGCTGAGCCACGGTaGCTGGTAAGAAGAGCTCCA +
Preference number: 2 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSLAEPR*LVRRAP
Trigger: TGGAGCTCTTCTTACCAGCCACCGTGGCTCAGCCAG...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTGTGGGGCTGCCTCCCTaGCCAGAGCAGCAACCAAGA +
Preference number: 2 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSVGLPP*PEQQPR
Trigger: TCTTGGTTGCTGCTCTGGCCAGGGAGGCAGCCCCAC...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCGCTAGCACAGCCCCCTaGGACGGAGGGACACTGGCA +
Preference number: 2 (lower is better)
Translates to: SRWAKARVWCHLSPETKPASTAP*DGGTLA
Trigger: TGCCAGTGTCCCTCCGTCCCAGGGGGCTGTGCTAGC...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR GCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAGGGTCTGGGGACCTCTaGAGGTGGTTCCCGTTCTGC +
Preference number: 2 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPGSGDL*RWFPFC
Trigger: GCAGAACGGGAACCACCTGCAGAGGTCCCCAGACCC...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR GCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGGGTCTGGGGACCTCTaGAGGTGGTTCCCGTTCTGC +
Preference number: 2 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTGSGDL*RWFPFC
Trigger: GCAGAACGGGAACCACCTGCAGAGGTCCCCAGACCC...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp TTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCCACCCTCTGGGTCCTaGTTACGTGGGCCCCCTGGT +
Preference number: 2 (lower is better)
Translates to: LTLGLSNPEIKCQGSSLLPPSGS*LRGPPG
Trigger: ACCAGGGGGCCCACGTAACCAGGACCCAGAGGGTGG...GAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGCCACCCTCTGGGTCCTaGTTACGTGGGCCCCCTGGT +
Preference number: 2 (lower is better)
Translates to: LELGSEGSISTLTSPVRVPPSGS*LRGPPG
Trigger: ACCAGGGGGCCCACGTAACCAGGACCCAGAGGGTGG...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTGGGGACCTCTGCAGGTaGTTCCCGTTCTGCTCCACA +
Preference number: 2 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSGDLCR*FPFCST
Trigger: TGTGGAGCAGAACGGGAACCACCTGCAGAGGTCCCC...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR GCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTAGTTGTCTCCCGTCCTaGTTTGGGTCTGGGGACCTC +
Preference number: 2 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSSCLPS*FGSGDL
Trigger: GAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACT...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR GCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTAGTTGTCTCCCGTCCTaGTTTGGGTCTGGGGACCTC +
Preference number: 2 (lower is better)
Translates to: VREKFLVAPRGTASRPGASCLPS*FGSGDL
Trigger: GAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACT...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCAAGAGCTCCACCCTCTaGGTCCTGGTTACGTGGGCC +
Preference number: 2 (lower is better)
Translates to: APQDVEALSWALKAQFLPKSSTL*VLVTWA
Trigger: GGCCCACGTAACCAGGACCCAGAGGGTGGAGCTCTT...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTGGCTGAGCCACGGTaGCTGGTAAGAAGAGCTCCA +
Preference number: 2 (lower is better)
Translates to: VREKFLVAPRGTASRPGALAEPR*LVRRAP
Trigger: TGGAGCTCTTCTTACCAGCCACCGTGGCTCAGCCAG...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCGGGGACCTCTGCAGGTaGTTCCCGTTCTGCTCCACA +
Preference number: 2 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPGDLCR*FPFCST
Trigger: TGTGGAGCAGAACGGGAACCACCTGCAGAGGTCCCC...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTGGGGACCTCTGCAGGTaGTTCCCGTTCTGCTCCACA +
Preference number: 2 (lower is better)
Translates to: AAAPQDVEALSWALKAQFGDLCR*FPFCST
Trigger: TGTGGAGCAGAACGGGAACCACCTGCAGAGGTCCCC...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACATCTCCCGTCCTGCTTTaGGTCTGGGGACCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTSPVLL*VWGPLQ
Trigger: CTGCAGAGGTCCCCAGACCCAAAGCAGGACGGGAGA...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCACACAGAGAAGCCCTaGAGGCTGGGAGGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: AAAPQDVEALSWALKAQFHTEKP*RLGGFP
Trigger: GGGAAAGCCTCCCAGCCTCCAGGGCTTCTCTGTGTG...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACACACACAGAGAAGCCCTaGAGGCTGGGAGGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTHTEKP*RLGGFP
Trigger: GGGAAAGCCTCCCAGCCTCCAGGGCTTCTCTGTGTG...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGGCAAAAGCAAGAGTCTaGTGCCATTTAAGCCCCGAG +
Preference number: 2 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLAKARV*CHLSPE
Trigger: CTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGC...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR GCA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTGGGTCTGGGGACCTCTaGAGGTGGTTCCCGTTCTGC +
Preference number: 2 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSGSGDL*RWFPFC
Trigger: GCAGAACGGGAACCACCTGCAGAGGTCCCCAGACCC...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTCTGGCTGAGCCACGGTaGCTGGTAAGAAGAGCTCCA +
Preference number: 2 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSLAEPR*LVRRAP
Trigger: TGGAGCTCTTCTTACCAGCCACCGTGGCTCAGCCAG...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR CCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTAGGCTCAGCTCCTCTCTaGCTGAGCCACGGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLGSAPL*LSHGGW
Trigger: CCAGCCACCGTGGCTCAGCCAGAGAGGAGCTGAGCC...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR CCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGTCTCCCGTCCTGCTTTaGGTCTGGGGACCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: LELGSEGSISTLTSPVRVSPVLL*VWGPLQ
Trigger: CTGCAGAGGTCCCCAGACCCAAAGCAGGACGGGAGA...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR CAA 90 bp CGTCTGGCCTTTTGCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTaGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGG +
Preference number: 2 (lower is better)
Translates to: RLAFCSCTPGCRSLE*GSEGSISTLTSPVR
Trigger: CCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGCAAAAGGCCAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR GCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTCTCGAGGATCACTTCTaGTTGCTGGGAGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SCTPGCRSLELGSEGSISLEDHF*LLGVGL
Trigger: CAGCCCCACTCCCAGCAAGCAGAAGTGATCCTCGAG...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR GCA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGGGCTTCGTGTGGAAATaGCCACAAAACAAATGCAAC +
Preference number: 2 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLGFVWK*PQNKCN
Trigger: GTTGCATTTGTTTTGTGGGCATTTCCACACGAAGCC...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR GCA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTCCCTATAAAAAGCAGTaGCACCCAGAGGCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSPYKKQ*HPEAGE
Trigger: CTCCCCTGCCTCTGGGTGGCACTGCTTTTTATAGGG...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR CCA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGTCTCCCGTCCTGCTTTaGGTCTGGGGACCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQSPVLL*VWGPLQ
Trigger: CTGCAGAGGTCCCCAGACCCAAAGCAGGACGGGAGA...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR TCA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTTCTCCAGTGAGGGTGTaGGTAGGCTTCGTGTGGAAA +
Preference number: 2 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSSPVRV*VGFVWK
Trigger: TTTCCACACGAAGCCTACTCACACCCTCACTGGAGA...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR CCA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACAAGAGCTCCACCCTCTaGGTCCTGGTTACGTGGGCC +
Preference number: 2 (lower is better)
Translates to: AESFPERHWSRFCNLNLHKSSTL*VLVTWA
Trigger: GGCCCACGTAACCAGGACCCAGAGGGTGGAGCTCTT...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR CCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTACTCAAGTCCGTCGGTaGAAAGATATGGCCAACAGG +
Preference number: 2 (lower is better)
Translates to: VREKFLVAPRGTASRPGATQVRR*KDMANR
Trigger: CCTGTTGGCCATATCTTTCCACCGACGGACTTGAGT...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR TCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTACCAGGCCTGGAGCTCTaGATGACCTGTGTCCCCATT +
Preference number: 2 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLPGLEL*MTCVPI
Trigger: AATGGGGACACAGGTCATTCAGAGCTCCAGGCCTGG...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR GCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTACTCGAGGATCACTTCTaGTTGCTGGGAGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLLEDHF*LLGVGL
Trigger: CAGCCCCACTCCCAGCAAGCAGAAGTGATCCTCGAG...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR GCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTTGCCCACAAAACAAATaGAACACTCAAGTCCGTCGG +
Preference number: 2 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSCPQNK*NTQVRR
Trigger: CCGACGGACTTGAGTGTTGCATTTGTTTTGTGGGCA...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR GCA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACCCACGTCTGGCCTTTTaGAGCTGCACCCCAGGATGT +
Preference number: 2 (lower is better)
Translates to: AESFPERHWSRFCNLNLHPRLAF*SCTPGC
Trigger: ACATCCTGGGGTGCAGCTGCAAAAGGCCAGACGTGG...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR GCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTGGCTTCGTGTGGAAATaGCCACAAAACAAATGCAAC +
Preference number: 2 (lower is better)
Translates to: VREKFLVAPRGTASRPGAGFVWK*PQNKCN
Trigger: GTTGCATTTGTTTTGTGGGCATTTCCACACGAAGCC...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTAAGAAGCCCTGGAGGCTaGGAGGCTTTCCCTTTGACT +
Preference number: 2 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLRSPGG*EAFPLT
Trigger: AGTCAAAGGGAAAGCCTCCCAGCCTCCAGGGCTTCT...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR GCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTGGCTTCGTGTGGAAATaGCCACAAAACAAATGCAAC +
Preference number: 2 (lower is better)
Translates to: SCTPGCRSLELGSEGSISGFVWK*PQNKCN
Trigger: GTTGCATTTGTTTTGTGGGCATTTCCACACGAAGCC...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR TCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTAGGACAGAGTGTTTGTTaGTTTTTCGTTTCGGTTTCA +
Preference number: 2 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLGQSVC*FFVSVS
Trigger: TGAAACCGAAACGAAAAATCAACAAACACTCTGTCC...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR GCA 72 bp AGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTaGAGGTGGTTCCCGTTCTGCTCCACAGGGCTCAGC +
Preference number: 3 (lower is better)
Translates to: SCLPSCFGSGDL*RWFPFCSTGLS
Trigger: GCTGAGCCCTGTGGAGCAGAACGGGAACCACCTGCAGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR CCA 72 bp CGGTGGCTGGTAAGAAGAGCTCCACCCTCTGGGTCCTaGTTACGTGGGCCCCCTGGTCCCTGTAAGGTGGAT +
Preference number: 3 (lower is better)
Translates to: RWLVRRAPPSGS*LRGPPGPCKVD
Trigger: ATCCACCTTACAGGGACCAGGGGGCCCACGTAACCAGGACCCAGAGGGTGGAGCTCTTCTTACCAGCCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR CCA 72 bp TCTGTGCTAGCACAGCCCCCTGGGACGGAGGGACACTaGCAGGATACAGGCCTTTCCACGTCTGGCCTTTTG +
Preference number: 3 (lower is better)
Translates to: SVLAQPPGTEGH*QDTGLSTSGLL
Trigger: CAAAAGGCCAGACGTGGAAAGGCCTGTATCCTGCCAGTGTCCCTCCGTCCCAGGGGGCTGTGCTAGCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CAA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTTGGGAGGCTTTCCCTTaGACTCTAGGGCTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSWEAFP*TLGLSN
Trigger: GTTTGAGAGCCCTAGAGTCAAAGGGAAAGCCTCCCA...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CAA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTGGGAGAAGTTTCTTGTaGCACCAAGAGGCACTGCTT +
Preference number: 3 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSGRSFL*HQEALL
Trigger: AAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCC...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CAA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAGTCTCCCGTCCTGCTTaGGGTCTGGGGACCTCTGCA +
Preference number: 3 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPVSRPA*GLGTSA
Trigger: TGCAGAGGTCCCCAGACCCAAAGCAGGACGGGAGAC...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CAA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCGTCTCCCGTCCTGCTTaGGGTCTGGGGACCTCTGCA +
Preference number: 3 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPVSRPA*GLGTSA
Trigger: TGCAGAGGTCCCCAGACCCAAAGCAGGACGGGAGAC...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CAA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCGCTCCTCCAAGCAGTaGTCTCCCGTCCTGCTTTGG +
Preference number: 3 (lower is better)
Translates to: VREKFLVAPRGTASRPGARSSKQ*SPVLLW
Trigger: CCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCG...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CAA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTTCCACGTCTGGCCTTTaGCAGCTGCACCCCAGGATG +
Preference number: 3 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSSTSGL*QLHPRM
Trigger: CATCCTGGGGTGCAGCTGCAAAAGGCCAGACGTGGA...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CAA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCCGCTCCTCCAAGCAGTaGTCTCCCGTCCTGCTTTGG +
Preference number: 3 (lower is better)
Translates to: SRWAKARVWCHLSPETKPRSSKQ*SPVLLW
Trigger: CCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCG...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR CAA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCCGCTCCTCCAAGCAGTaGTCTCCCGTCCTGCTTTGG +
Preference number: 3 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPRSSKQ*SPVLLW
Trigger: CCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCG...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CAA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGTGGGAGGCTTTCCCTTaGACTCTAGGGCTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: IWPTGAGPSRITSACWEWWEAFP*TLGLSN
Trigger: GTTTGAGAGCCCTAGAGTCAAAGGGAAAGCCTCCCA...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CAA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTTCCACGTCTGGCCTTTaGCAGCTGCACCCCAGGATG +
Preference number: 3 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSSTSGL*QLHPRM
Trigger: CATCCTGGGGTGCAGCTGCAAAAGGCCAGACGTGGA...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR TCA 72 bp TTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTaGATGACCTGTGTCCCCATTCTCAGGTCTGTGCTA +
Preference number: 3 (lower is better)
Translates to: LHQEALLPGLEL*MTCVPILRSVL
Trigger: TAGCACAGACCTGAGAATGGGGACACAGGTCATTCAGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR GCA 72 bp AGGATACAGGCCTTTCCACGTCTGGCCTTTTGCAGCTaGACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCT +
Preference number: 3 (lower is better)
Translates to: RIQAFPRLAFCS*TPGCRSLELGS
Trigger: AGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGCAAAAGGCCAGACGTGGAAAGGCCTGTATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR GCA 72 bp ACTGGCAGGATACAGGCCTTTCCACGTCTGGCCTTTTaGAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTG +
Preference number: 3 (lower is better)
Translates to: TGRIQAFPRLAF*SCTPGCRSLEL
Trigger: CAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGCAAAAGGCCAGACGTGGAAAGGCCTGTATCCTGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CAA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCAGGATGTAGAAGCCTaGAGTTGGGCTCTGAAGGCT +
Preference number: 3 (lower is better)
Translates to: VREKFLVAPRGTASRPGAQDVEA*SWALKA
Trigger: AGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTG...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR CCA 72 bp TGCCCACAAAACAAATGCAACACTCAAGTCCGTCGGTaGAAAGATATGGCCAACAGGGGCAGGACCCTCGAG +
Preference number: 3 (lower is better)
Translates to: CPQNKCNTQVRR*KDMANRGRTLE
Trigger: CTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTTTGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR TCA 72 bp GGGCCTCCGCAGTCAGAGAAGTGCCGAGTCCTTTCCTaGAAGGCATTGGAGTCGATTCTGCAACCTAAATCT +
Preference number: 3 (lower is better)
Translates to: GPPQSEKCRVLS*KALESILQPKS
Trigger: AGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGCACTTCTCTGACTGCGGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR GCA 72 bp CCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATaGCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCC +
Preference number: 3 (lower is better)
Translates to: PLTLGLSNPEIK*QGSSLLQAVVS
Trigger: GGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR GCA 72 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTaGAACCTAAATCTTCACCTCCTCATCATGGGGGCC +
Preference number: 3 (lower is better)
Translates to: AESFPERHWSRF*NLNLHLLIMGA
Trigger: GGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR CAA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTTGTAGAAGCCTTGAGTaGGGCTCTGAAGGCTCAATT +
Preference number: 3 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTCRSLE*GSEGSI
Trigger: AATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACA...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CAA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCTCCCAGCTGCTTCCTTaGGTTACCATCTCCAAATCT +
Preference number: 3 (lower is better)
Translates to: SRWAKARVWCHLSPETKPSQLLP*VTISKS
Trigger: AGATTTGGAGATGGTAACCAAAGGAAGCAGCTGGGA...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR TCA 72 bp GGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGTaGGTAGGCTTCGTGTGGAAATGCCCACAAAACAAA +
Preference number: 3 (lower is better)
Translates to: GSISTLTSPVRV*VGFVWKCPQNK
Trigger: TTTGTTTTGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR-3UTR CAA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACTGTAGAAGCCTTGAGTaGGGCTCTGAAGGCTCAATT +
Preference number: 3 (lower is better)
Translates to: AESFPERHWSRFCNLNLHCRSLE*GSEGSI
Trigger: AATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACA...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
3UTR-3UTR CAA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACCGTTTCGGTTTCAGTTaGGTTGTCATTGGTTTTTGT +
Preference number: 3 (lower is better)
Translates to: AESFPERHWSRFCNLNLHRFGFS*VVIGFC
Trigger: ACAAAAACCAATGACAACCAAACTGAAACCGAAACG...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTGGCAGGGGAGGGCCCTaGGGAGCACGGGGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGGRGGP*GARGRR
Trigger: ACGGCGACCCCGTGCTCCTCAGGGCCCTCCCCTGCC...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACAGCGGACGCGCGCGCTaGACTGCAGCCGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDSGRAR*TAAAAP
Trigger: AGGGGCAGCGGCTGCAGTGCAGCGCGCGCGTCCGCT...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS-3UTR GCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCCGGGGCACTCCTCGCTaGTGGAGGGAGGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLRGTPR*WREGRA
Trigger: TGCCCGACCCTCCCTCCAGCAGCGAGGAGTGCCCCG...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCGGGTCCTCCAGGAGGTaGGCGGGGCACTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPGSSRR*AGHSSL
Trigger: CAGCGAGGAGTGCCCCGCCCACCTCCTGGAGGACCC...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCGCCCTGGTGGTCCTCTaGGTGGGTGCCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLALVVL*VGAPWL
Trigger: GAGCCAGGGGGCACCCACCCAGAGGACCACCAGGGC...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCCTGCAGCACCAGGATaGCGTCCGCGCAGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSPAAPG*RPRRAG
Trigger: ACCCGCTCTGCGCGGACGTCATCCTGGTGCTGCAGG...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTGGGTCCCTCCGCGCCTaGAAGTTGGGACGACGCCGG +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGGSLRA*KLGRRR
Trigger: CCGGCGTCGTCCCAACTTGCAGGCGCGGAGGGACCC...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS-3UTR GCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCTGCCCCGGCCTTCCCTaGATCCCCACCAGGGTACCC +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLCPGLP*IPTRVP
Trigger: GGGTACCCTGGTGGGGATGCAGGGAAGGCCGGGGCA...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCGGCACTCCTCGCTGCTaGAGGGAGGGTCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLGTPRC*REGRAP
Trigger: TGGTGCCCGACCCTCCCTCCAGCAGCGAGGAGTGCC...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTGGCACTCCTCGCTGCTaGAGGGAGGGTCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSGTPRC*REGRAP
Trigger: TGGTGCCCGACCCTCCCTCCAGCAGCGAGGAGTGCC...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTGCCCTGGTGGTCCTCTaGGTGGGTGCCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGALVVL*VGAPWL
Trigger: GAGCCAGGGGGCACCCACCCAGAGGACCACCAGGGC...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGGGTCGGGCACCACGATaGTCGGGGGCGGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLGRAPR*SGAVAW
Trigger: CCAAGCCACCGCCCCCGATCATCGTGGTGCCCGACC...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGGGCAGGGGAGGGCCCTaGGGAGCACGGGGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGGRGGP*GARGRR
Trigger: ACGGCGACCCCGTGCTCCTCAGGGCCCTCCCCTGCC...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTGCCAGGCCCCTGTGTTaGCCTCGGAGCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGARPLC*PRSQLA
Trigger: TGCCAGCTGGCTCCGAGGGCAACACAGGGGCCTGGC...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAGGGTCCTCCAGGAGGTaGGCGGGGCACTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRGSSRR*AGHSSL
Trigger: CAGCGAGGAGTGCCCCGCCCACCTCCTGGAGGACCC...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTTGGTGGTCCTCTGGGTaGGTGCCCCCTGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGWWSSG*VPPGSE
Trigger: CTCGGAGCCAGGGGGCACCCACCCAGAGGACCACCA...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTGGTCGGGCACCACGATaGTCGGGGGCGGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSGRAPR*SGAVAW
Trigger: CCAAGCCACCGCCCCCGATCATCGTGGTGCCCGACC...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCGGGGCTTGTGGGCGCTaGTGGTGCCATCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLGACGR*WCHHPG
Trigger: TCCTGGATGATGGCACCATCAGCGCCCACAAGCCCC...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTGCGGCGGGAGATGAGTaGAGCTCGGATGGCGTTGTC +
Preference number: 4 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSAAGDE*SSDGVV
Trigger: GACAACGCCATCCGAGCTGCACTCATCTCCCGCCGC...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTCGGGGCACTCCTCGCTaGTGGAGGGAGGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSRGTPR*WREGRA
Trigger: TGCCCGACCCTCCCTCCAGCAGCGAGGAGTGCCCCG...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCGGGTCTGGGGACCTCTaGAGGTGGTTCCCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPGSGDL*RWFPFC
Trigger: GCAGAACGGGAACCACCTGCAGAGGTCCCCAGACCC...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCGTTTGGGCTGCCGCTTaGGGTGGAGGTAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLVWAAA*GGGSPP
Trigger: AGGAGGACTACCTCCACCTCAAGCGGCAGCCCAAAC...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTACGCGCGCGCTGCACTaGAGCCGCTGCCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGATRALH*SRCPFR
Trigger: CCGGAAGGGGCAGCGGCTGCAGTGCAGCGCGCGCGT...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS-3UTR GCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTTGCAGCAGAGGCCGCTaGACATTGCGGAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGCSRGR*TLRRWD
Trigger: GTCCCACCTCCGCAATGTGCAGCGGCCTCTGCTGCA...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCTCTGGGCTGCCGGGTTaGATCTGGTTCCGACAGCTC +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLSGLPG*IWFRQL
Trigger: GAGCTGTCGGAACCAGATGCAACCCGGCAGCCCAGA...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCTCGCCTCTGGGGCTCTaGTGGCCTGTCACTATTCCC +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLSPLGL*WPVTIP
Trigger: GGGAATAGTGACAGGCCAGCAGAGCCCCAGAGGCGA...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR CCA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGCCCTGGTGGTCCTCTaGGTGGGTGCCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GKIWPTGAGPSRITSACWALVVL*VGAPWL
Trigger: GAGCCAGGGGGCACCCACCCAGAGGACCACCAGGGC...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCGTAAGATCCCGTCGCTaGTGGAAGCACGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLVRSRR*WKHGGQ
Trigger: CTGGCCTCCGTGCTTCCACCAGCGACGGGATCTTAC...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGACCACCCTCTGGGTCCTaGTTACGTGGGCCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRPPSGS*LRGPPG
Trigger: ACCAGGGGGCCCACGTAACCAGGACCCAGAGGGTGG...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCGGGACGGAGGGACACTaGCAGGATACAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLGTEGH*QDTGLS
Trigger: GGAAAGGCCTGTATCCTGCCAGTGTCCCTCCGTCCC...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAGCTAGCACAGCCCCCTaGGACGGAGGGACACTGGCA +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRASTAP*DGGTLA
Trigger: TGCCAGTGTCCCTCCGTCCCAGGGGGCTGTGCTAGC...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGGGCAGCCCACCAAGATaGCAGGTGCTCGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: IWPTGAGPSRITSACWEWGSPPR*QVLGGR
Trigger: TCTGCCCCCGAGCACCTGTCATCTTGGTGGGCTGCC...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGGGTGGCGGCGGGAGATaGGTGCAGCTCGGATGGCGT +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGGGGGR*VQLGWR
Trigger: ACGCCATCCGAGCTGCACTCATCTCCCGCCGCCACC...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAGGTCGGGGCTGGAGGTaGACATGCCGGTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRGRGWR*TCRCRG
Trigger: ACCTCTACACCGGCATGTTCACCTCCAGCCCCGACC...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACGTTTGGGCTGCCGCTTaGGGTGGAGGTAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDVWAAA*GGGSPP
Trigger: AGGAGGACTACCTCCACCTCAAGCGGCAGCCCAAAC...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCCCAGGCCTGGAGCTCTaGATGACCTGTGTCCCCATT +
Preference number: 4 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPPGLEL*MTCVPI
Trigger: AATGGGGACACAGGTCATTCAGAGCTCCAGGCCTGG...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTCGGGGCACTCCTCGCTaGTGGAGGGAGGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSRGTPR*WREGRA
Trigger: TGCCCGACCCTCCCTCCAGCAGCGAGGAGTGCCCCG...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAATGCGCACCCGCTCCTaGAGCACCAGGATGACGTCC +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRMRTRS*STRMTS
Trigger: GGACGTCATCCTGGTGCTGCAGGAGCGGGTGCGCAT...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCTCTTGTGGGCAAAGATaGGCACCCGCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLSCGQR*APAPAA
Trigger: TGCTGCAGGAGCGGGTGCGCATCTTTGCCCACAAGA...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCGGTCCTCTGGGTGGGTaGCCCCTGGCTCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPGPLGG*PLAPRG
Trigger: GCCCCTCGGAGCCAGGGGGCACCCACCCAGAGGACC...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCGGTCCTCTGGGTGGGTaGCCCCTGGCTCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPGPLGG*PLAPRG
Trigger: GCCCCTCGGAGCCAGGGGGCACCCACCCAGAGGACC...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCCAGCACGGCCCGCATaGAGCTCTTGCTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDPARPA*SSCLCR
Trigger: CCTACACAAGCAAGAGCTGCATGCGGGCCGTGCTGG...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCCCGGTCACTGTGTACTaGTCTGTGAGGGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLPVTVY*SVRATR
Trigger: CCTGGTTGCCCTCACAGAGCAGTACACAGTGACCGG...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCTGCACCAAGAGGCACTaGTTCCAGGCCTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLCTKRH*FQAWSS
Trigger: AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCA...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTCGGGAGGCCCAGGTGTaGCCCCACGCTGTCCATCTT +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSREAQV*PHAVHL
Trigger: AAGATGGACAGCGTGGGGGCACACCTGGGCCTCCCG...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCAGGAAACCAGGGCTGTaGTCCTGCTGGGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPRKPGL*SCWDSF
Trigger: GAAGGAGTCCCAGCAGGAGCACAGCCCTGGTTTCCT...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAAGATCCCGTCGCTGGTaGAAGCACGGAGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRRSRRW*KHGGQQ
Trigger: CTGCTGGCCTCCGTGCTTCCACCAGCGACGGGATCT...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCAGGGCCCCGGCTGGATaGAACTGTCCATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLRAPAG*NCPSSP
Trigger: TGGTGAAGATGGACAGTTCCATCCAGCCGGGGCCCT...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACTTGGTCCGGCGGACGTaGAAGGCCTTGGTGATCTCC +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDLVRRT*KALVIS
Trigger: GGAGATCACCAAGGCCTTCCACGTCCGCCGGACCAA...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCCTGGCTGAGCCACGGTaGCTGGTAAGAAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPLAEPR*LVRRAP
Trigger: TGGAGCTCTTCTTACCAGCCACCGTGGCTCAGCCAG...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACGGGGACCTCTGCAGGTaGTTCCCGTTCTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDGDLCR*FPFCST
Trigger: TGTGGAGCAGAACGGGAACCACCTGCAGAGGTCCCC...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCACACAGAGAAGCCCTaGAGGCTGGGAGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGHTEKP*RLGGFP
Trigger: GGGAAAGCCTCCCAGCCTCCAGGGCTTCTCTGTGTG...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAGTGGGGCTGCCTCCCTaGCCAGAGCAGCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRVGLPP*PEQQPR
Trigger: TCTTGGTTGCTGCTCTGGCCAGGGAGGCAGCCCCAC...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTGCCCTCGGAGCCAGCTaGCAGGGTCAGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFALGAS*QGQGLR
Trigger: GCGGAGGCCCTGACCCTGCCAGCTGGCTCCGAGGGC...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTGCCCCATGGGGGCTaGGAGCTAGTTTCAATCCCC +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDLPHGG*ELVSIP
Trigger: GGGGATTGAAACTAGCTCCCAGCCCCCATGGGGCAG...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGAAGCGCGGGCACAGATaGGCCTGGTCTTACCCACGG +
Preference number: 4 (lower is better)
Translates to: IWPTGAGPSRITSACWEWKRGHR*AWSYPR
Trigger: CCGTGGGTAAGACCAGGCTCATCTGTGCCCGCGCTT...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACGGCGCAGAGAGACGCTaGCATCATCTACCACGTCTC +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDGAERR*HHLPRL
Trigger: GAGACGTGGTAGATGATGTCAGCGTCTCTCTGCGCC...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGGGCAGCCCACCAAGATaGCAGGTGCTCGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGGSPPR*QVLGGR
Trigger: TCTGCCCCCGAGCACCTGTCATCTTGGTGGGCTGCC...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTGGTGGCGGCGGGAGATaGGTGCAGCTCGGATGGCGT +
Preference number: 4 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSGGGGR*VQLGWR
Trigger: ACGCCATCCGAGCTGCACTCATCTCCCGCCGCCACC...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCGGTCGGGCACCACGATaGTCGGGGGCGGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPGRAPR*SGAVAW
Trigger: CCAAGCCACCGCCCCCGATCATCGTGGTGCCCGACC...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCCACCAAGATGACAGGTaGTCGGGGGCAGAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLHQDDR*SGAEVL
Trigger: AAGCACTTCTGCCCCCGAGCACCTGTCATCTTGGTG...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGGCGGCGGGAGATGAGTaGAGCTCGGATGGCGTTGTC +
Preference number: 4 (lower is better)
Translates to: IWPTGAGPSRITSACWEWAAGDE*SSDGVV
Trigger: GACAACGCCATCCGAGCTGCACTCATCTCCCGCCGC...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAGAGGCCGCTGCACATTaGGGAGGTGGGACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRREAAAH*GGGTSR
Trigger: TCTGGAAGTCCCACCTCCGCAATGTGCAGCGGCCTC...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGGGTCCTCTGGGTGGGTaGCCCCTGGCTCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVGPLGG*PLAPRG
Trigger: GCCCCTCGGAGCCAGGGGGCACCCACCCAGAGGACC...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCACGTCAAAGCTGGCTaGTCGGAGCAGGAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGHVKAG*SEQEVS
Trigger: CGAGACTTCCTGCTCCGAGCAGCCAGCTTTGACGTG...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGACCAGCACGGCCCGCATaGAGCTCTTGCTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRPARPA*SSCLCR
Trigger: CCTACACAAGCAAGAGCTGCATGCGGGCCGTGCTGG...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCCGGTCACTGTGTACTaGTCTGTGAGGGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDPVTVY*SVRATR
Trigger: CCTGGTTGCCCTCACAGAGCAGTACACAGTGACCGG...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCCTGGCCTTTTGCAGCTaGACCCCAGGATGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLLAFCS*TPGCRS
Trigger: GCTTCTACATCCTGGGGTGCAGCTGCAAAAGGCCAG...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTAGCACGGGGTCGCCGTaGACTCATTCCTACTTCCTT +
Preference number: 4 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSSTGSP*THSYFL
Trigger: AAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCT...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCCCCTATAAAAAGCAGTaGCACCCAGAGGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLPYKKQ*HPEAGE
Trigger: CTCCCCTGCCTCTGGGTGGCACTGCTTTTTATAGGG...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTGAGAGTTCTCTGGGCTaGCGGGTTGCATCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGESSLG*RVASGS
Trigger: GGAACCAGATGCAACCCGGCAGCCCAGAGAACTCTC...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGACGATGGCCCATACTGTaGGCACATGCGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRRWPIL*AHAWPA
Trigger: TGCTGGCCACGCATGTGCCCACAGTATGGGCCATCG...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACTCCTTGATGCCGAACTaGGCCACCACGCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDSLMPN*ATTLVS
Trigger: TGAGACCAGCGTGGTGGCCCAGTTCGGCATCAAGGA...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGGGTCCTCCAGGAGGTaGGCGGGGCACTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTGSSRR*AGHSSL
Trigger: CAGCGAGGAGTGCCCCGCCCACCTCCTGGAGGACCC...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCAGAGTGGCCCTGGTaGTCCTCTGGGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGSEWPW*SSGWVP
Trigger: GGGCACCCACCCAGAGGACCACCAGGGCCACTCTGA...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGCGGAAGGGCCCCGGCTaGATGGAACTGTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLRKGPG*MELSIF
Trigger: GAAGATGGACAGTTCCATCCAGCCGGGGCCCTTCCG...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAACACCACCTCCCGGGTaGAGCTCTCCACAAATGGCC +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRTPPPG*SSPQMA
Trigger: GGCCATTTGTGGAGAGCTCCACCCGGGAGGTGGTGT...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGGAGGGCAACCAGGTGTaGCAGGCAGAGGCGGTTGGC +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGEGNQV*QAEAVG
Trigger: GCCAACCGCCTCTGCCTGCCACACCTGGTTGCCCTC...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGCCACCCTCTGGGTCCTaGTTACGTGGGCCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGPPSGS*LRGPPG
Trigger: ACCAGGGGGCCCACGTAACCAGGACCCAGAGGGTGG...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTGGCTGAGCCACGGTaGCTGGTAAGAAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDLAEPR*LVRRAP
Trigger: TGGAGCTCTTCTTACCAGCCACCGTGGCTCAGCCAG...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGATCTCCCGTCCTGCTTTaGGTCTGGGGACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRSPVLL*VWGPLQ
Trigger: CTGCAGAGGTCCCCAGACCCAAAGCAGGACGGGAGA...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTAGAAGCCCTGGAGGCTaGGAGGCTTTCCCTTTGACT +
Preference number: 4 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSRSPGG*EAFPLT
Trigger: AGTCAAAGGGAAAGCCTCCCAGCCTCCAGGGCTTCT...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAGGGACGGAGGGACACTaGCAGGATACAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRGTEGH*QDTGLS
Trigger: GGAAAGGCCTGTATCCTGCCAGTGTCCCTCCGTCCC...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGGCAGCTGGTACTGGGTaGGGGTGGCATTGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGAAGTG*GWHCKR
Trigger: GCGCTTGCAATGCCACCCTCACCCAGTACCAGCTGC...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCGGTACCACATGGTCTTaGCATGGTGGAGGGAATTGG +
Preference number: 4 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPGTTWS*HGGGNW
Trigger: CCAATTCCCTCCACCATGTCAAGACCATGTGGTACC...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTTGTCAAAGACGTCCTTaGTGCCGAACTGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGCQRRP*CRTGPP
Trigger: TGGTGGCCCAGTTCGGCATCAAGGACGTCTTTGACA...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCGGTGGCGGCGGGAGATaGGTGCAGCTCGGATGGCGT +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPGGGGR*VQLGWR
Trigger: ACGCCATCCGAGCTGCACTCATCTCCCGCCGCCACC...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCCCTGCAGCACCAGGATaGCGTCCGCGCAGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPPAAPG*RPRRAG
Trigger: ACCCGCTCTGCGCGGACGTCATCCTGGTGCTGCAGG...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCGCCGGGATTTGTAGGTaGGAGGATCTTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPAGICR*EDLLPS
Trigger: AGATGGCAGAAGATCCTCTCACCTACAAATCCCGGC...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGCCGTGTACAGGTACTTaGGGACAGCCCGGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGPCTGT*GQPGRA
Trigger: GGCCCTTCCGGGCTGTCCTCAAGTACCTGTACACGG...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTTCTCCAGTGAGGGTGTaGGTAGGCTTCGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSSPVRV*VGFVWK
Trigger: TTTCCACACGAAGCCTACTCACACCCTCACTGGAGA...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTAGGCAGGGGAGGGCCCTaGGGAGCACGGGGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLGRGGP*GARGRR
Trigger: ACGGCGACCCCGTGCTCCTCAGGGCCCTCCCCTGCC...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTGCAATGTGGGCAATGTaGATGAGGTCACGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSAMWAM*MRSRSF
Trigger: GAACGAGCGTGACCTCATGCACATTGCCCACATTGC...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCACAGGTGGCCACCGATaGTTCTCGAAATACTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLTGGHR*FSKYSW
Trigger: CCAGGAGTATTTCGAGAAGCATCGGTGGCCACCTGT...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAAGTTGTCTCCCGTCCTaGTTTGGGTCTGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRSCLPS*FGSGDL
Trigger: GAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACT...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCCCTATAAAAAGCAGTaGCACCCAGAGGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDPYKKQ*HPEAGE
Trigger: CTCCCCTGCCTCTGGGTGGCACTGCTTTTTATAGGG...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCGCCAGGCCCCTGTGTTaGCCTCGGAGCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SRWAKARVWCHLSPETKPARPLC*PRSQLA
Trigger: TGCCAGCTGGCTCCGAGGGCAACACAGGGGCCTGGC...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCGACCAAACCCCTCTTTaGCGCCAGCCCGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPDQTPL*RQPGPL
Trigger: GAGGGGCCCGGGCTGGCGGCAAAGAGGGGTTTGGTC...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTTGGGCTGCGCTGAGCTaGAGGGAGGCCGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSWAALS*REAEQP
Trigger: AGGCTGCTCGGCCTCCCTGCAGCTCAGCGCAGCCCA...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCATGCCCCGGCCTTCCCTaGATCCCCACCAGGGTACCC +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPCPGLP*IPTRVP
Trigger: GGGTACCCTGGTGGGGATGCAGGGAAGGCCGGGGCA...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGTCTGGGCTGCCGGGTTaGATCTGGTTCCGACAGCTC +
Preference number: 4 (lower is better)
Translates to: IWPTGAGPSRITSACWEWSGLPG*IWFRQL
Trigger: GAGCTGTCGGAACCAGATGCAACCCGGCAGCCCAGA...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGAGGAAACCAGGGCTGTaGTCCTGCTGGGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLRKPGL*SCWDSF
Trigger: GAAGGAGTCCCAGCAGGAGCACAGCCCTGGTTTCCT...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTTCGGGGGCGGTGGCTTaGGGGGTAGGAAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFSGAVA*GVGRVP
Trigger: AGGCACCCTTCCTACCCCCCAAGCCACCGCCCCCGA...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTGGCACTCCTCGCTGCTaGAGGGAGGGTCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFGTPRC*REGRAP
Trigger: TGGTGCCCGACCCTCCCTCCAGCAGCGAGGAGTGCC...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTTGGTGGTCCTCTGGGTaGGTGCCCCCTGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSWWSSG*VPPGSE
Trigger: CTCGGAGCCAGGGGGCACCCACCCAGAGGACCACCA...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGACGCACACGTCAAAGCTaGCTGCTCGGAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRRTRQS*LLGAGS
Trigger: ACTTCCTGCTCCGAGCAGCCAGCTTTGACGTGTGCG...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAAGGGCCCCGGCTGGATaGAACTGTCCATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRRAPAG*NCPSSP
Trigger: TGGTGAAGATGGACAGTTCCATCCAGCCGGGGCCCT...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTCGGAAGGGCCCCGGCTaGATGGAACTGTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSRKGPG*MELSIF
Trigger: GAAGATGGACAGTTCCATCCAGCCGGGGCCCTTCCG...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTATCAACAGGGGCTTGTaGGCGCTGATGGTGCCATCA +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGINRGL*ALMVPS
Trigger: TGATGGCACCATCAGCGCCCACAAGCCCCTGTTGAT...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTACACCACCTCCCGGGTaGAGCTCTCCACAAATGGCC +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSTPPPG*SSPQMA
Trigger: GGCCATTTGTGGAGAGCTCCACCCGGGAGGTGGTGT...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACATGTCCACCATCATCTaGGTCGCTTCCATCAGCCCG +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDMSTII*VASISP
Trigger: CGGGCTGATGGAAGCGACCCAGATGATGGTGGACAT...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTGGGGACCTCTGCAGGTaGTTCCCGTTCTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSGDLCR*FPFCST
Trigger: TGTGGAGCAGAACGGGAACCACCTGCAGAGGTCCCC...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGGTGGGGCTGCCTCCCTaGCCAGAGCAGCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGVGLPP*PEQQPR
Trigger: TCTTGGTTGCTGCTCTGGCCAGGGAGGCAGCCCCAC...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCCTGCAGTCTCCAGATaGGCAAAAGCAAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSPAVSR*AKARVW
Trigger: CCAGACTCTTGCTTTTGCCCATCTGGAGACTGCAGG...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTTGTCCTCCAGCCGCCTaGTCTCTCTTGATGAGGATT +
Preference number: 4 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSCPPAA*SLLMRI
Trigger: AATCCTCATCAAGAGAGACCAGGCGGCTGGAGGACA...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCTCTCAGGGAATCCCGTaGTCACTCTCCTATGGCTTC +
Preference number: 4 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPSQGIP*SLSYGF
Trigger: GAAGCCATAGGAGAGTGACCACGGGATTCCCTGAGA...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGACCTCTGGGGCTCTGCTaGCCTGTCACTATTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRPLGLC*PVTIPC
Trigger: ACAGGGAATAGTGACAGGCCAGCAGAGCCCCAGAGG...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR TCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAGGGTGGCTTCTAGCGTaGGGAACACATCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRGWLLA*GTHLFL
Trigger: CAGGAAGAGATGTGTTCCTCACGCTAGAAGCCACCC...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS-3UTR TCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTGGCAGCCCACCAAGATaGCAGGTGCTCGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFGSPPR*QVLGGR
Trigger: TCTGCCCCCGAGCACCTGTCATCTTGGTGGGCTGCC...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACTGTGGGCAATGTGCATaGGGTCACGCTCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDCGQCA*GHARSH
Trigger: ATGAGAACGAGCGTGACCTCATGCACATTGCCCACA...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTTACGCACAGTGGAACTaGGCCAGTTCCAGGAACACA +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGYAQWN*ASSRNT
Trigger: TGTGTTCCTGGAACTGGCTCAGTTCCACTGTGCGTA...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTCCAGGCCTGGAGCTCTaGATGACCTGTGTCCCCATT +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSPGLEL*MTCVPI
Trigger: AATGGGGACACAGGTCATTCAGAGCTCCAGGCCTGG...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTGCACTGCAGCCGCTaGCCCTTCCGGATCAGCATC +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGALHCSR*PFRISI
Trigger: GATGCTGATCCGGAAGGGGCAGCGGCTGCAGTGCAG...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS-3UTR GCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGGAGGCCGCTGCACATTaGGGAGGTGGGACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGEAAAH*GGGTSR
Trigger: TCTGGAAGTCCCACCTCCGCAATGTGCAGCGGCCTC...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTTGCAGCAGAGGCCGCTaGACATTGCGGAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSCSRGR*TLRRWD
Trigger: GTCCCACCTCCGCAATGTGCAGCGGCCTCTGCTGCA...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGCCGGTCACTGTGTACTaGTCTGTGAGGGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: IWPTGAGPSRITSACWEWPVTVY*SVRATR
Trigger: CCTGGTTGCCCTCACAGAGCAGTACACAGTGACCGG...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGCTCACGCTCCTTCCGTaGCCGCTGGTAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLLTLLP*PLVMIF
Trigger: GAAGATCATTACCAGCGGGCACGGAAGGAGCGTGAG...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGAGTTGTCTCCCGTCCTaGTTTGGGTCTGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: IWPTGAGPSRITSACWEWSCLPS*FGSGDL
Trigger: GAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACT...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTTGGGCTGCGCTGAGCTaGAGGGAGGCCGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISWAALS*REAEQP
Trigger: AGGCTGCTCGGCCTCCCTGCAGCTCAGCGCAGCCCA...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCCTTTTCTCCAGGCTTaGATCGCTCTGTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDPFLQA*IALCSL
Trigger: GAGGGAACACAGAGCGATGCAAGCCTGGAGAAAAGG...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR CCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACATGCCGCGAAGACGCCTaGCGCTGCAGTCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTCREDA*RCSPRY
Trigger: GTACCTGGGACTGCAGCGCCAGGCGTCTTCGCGGCA...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS-3UTR CCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCCACGATATTGGTCGATaGCCCATACTGTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLHDIGR*PILWAH
Trigger: ATGTGCCCACAGTATGGGCCATCGACCAATATCGTG...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCTGGCACACACGATATTaGTCGATGGCCCATACTGTG +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLWHTRY*SMAHTV
Trigger: CACAGTATGGGCCATCGACCAATATCGTGTGTGCCA...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTAAGCGACGGTCTTTGTaGTGGTCTCCAAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGKRRSL*WSPKVS
Trigger: GGACACCTTTGGAGACCACCACAAAGACCGTCGCTT...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCCACATGGTCTTGACATaGTGGAGGGAATTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLHMVLT*WRELGL
Trigger: CAACCCCAATTCCCTCCACCATGTCAAGACCATGTG...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTGGATGCCCAGCTCCTTaGCCACCTCCCGACCCTTCT +
Preference number: 4 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSGCPAP*PPPDPS
Trigger: AGAAGGGTCGGGAGGTGGCCAAGGAGCTGGGCATCC...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTGGATGCCCAGCTCCTTaGCCACCTCCCGACCCTTCT +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGAGCPAP*PPPDPS
Trigger: AGAAGGGTCGGGAGGTGGCCAAGGAGCTGGGCATCC...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTTTCCAGAACTGCAGGTaGCGGCGGGAGATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSFQNCR*RREMSA
Trigger: TGCACTCATCTCCCGCCGCCACCTGCAGTTCTGGAA...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGTCGGGGGCGGTGGCTTaGGGGGTAGGAAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVSGAVA*GVGRVP
Trigger: AGGCACCCTTCCTACCCCCCAAGCCACCGCCCCCGA...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTTCAGAGTGGCCCTGGTaGTCCTCTGGGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTSEWPW*SSGWVP
Trigger: GGGCACCCACCCAGAGGACCACCAGGGCCACTCTGA...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTTCAGAGTGGCCCTGGTaGTCCTCTGGGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFSEWPW*SSGWVP
Trigger: GGGCACCCACCCAGAGGACCACCAGGGCCACTCTGA...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGAGGGCAACCAGGTGTaGCAGGCAGAGGCGGTTGGC +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTEGNQV*QAEAVG
Trigger: GCCAACCGCCTCTGCCTGCCACACCTGGTTGCCCTC...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCGAGGGCAACCAGGTGTaGCAGGCAGAGGCGGTTGGC +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPEGNQV*QAEAVG
Trigger: GCCAACCGCCTCTGCCTGCCACACCTGGTTGCCCTC...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGAAGAGCTCCACCCTCTaGGTCCTGGTTACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GKIWPTGAGPSRITSACWKSSTL*VLVTWA
Trigger: GGCCCACGTAACCAGGACCCAGAGGGTGGAGCTCTT...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCGGCTCAGCTCCTCTCTaGCTGAGCCACGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPGSAPL*LSHGGW
Trigger: CCAGCCACCGTGGCTCAGCCAGAGAGGAGCTGAGCC...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAGCTAGCACAGCCCCCTaGGACGGAGGGACACTGGCA +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPASTAP*DGGTLA
Trigger: TGCCAGTGTCCCTCCGTCCCAGGGGGCTGTGCTAGC...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACGCCCTCGGAGCCAGCTaGCAGGGTCAGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: AESFPERHWSRFCNLNLHALGAS*QGQGLR
Trigger: GCGGAGGCCCTGACCCTGCCAGCTGGCTCCGAGGGC...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTTGTCCTCCAGCCGCCTaGTCTCTCTTGATGAGGATT +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGCPPAA*SLLMRI
Trigger: AATCCTCATCAAGAGAGACCAGGCGGCTGGAGGACA...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCGCAGCTGGTACTGGGTaGGGGTGGCATTGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPAAGTG*GWHCKR
Trigger: GCGCTTGCAATGCCACCCTCACCCAGTACCAGCTGC...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAGCCGGGATTTGTAGGTaGGAGGATCTTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRAGICR*EDLLPS
Trigger: AGATGGCAGAAGATCCTCTCACCTACAAATCCCGGC...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTGGGGCTTGTGGGCGCTaGTGGTGCCATCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFGACGR*WCHHPG
Trigger: TCCTGGATGATGGCACCATCAGCGCCCACAAGCCCC...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCGGGGCTTGTGGGCGCTaGTGGTGCCATCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPGACGR*WCHHPG
Trigger: TCCTGGATGATGGCACCATCAGCGCCCACAAGCCCC...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAGGTCGGGGCTGGAGGTaGACATGCCGGTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPGRGWR*TCRCRG
Trigger: ACCTCTACACCGGCATGTTCACCTCCAGCCCCGACC...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGTACGCACAGTGGAACTaGGCCAGTTCCAGGAACACA +
Preference number: 4 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLYAQWN*ASSRNT
Trigger: TGTGTTCCTGGAACTGGCTCAGTTCCACTGTGCGTA...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTGAGGCCGCTGCACATTaGGGAGGTGGGACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGAEAAAH*GGGTSR
Trigger: TCTGGAAGTCCCACCTCCGCAATGTGCAGCGGCCTC...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCTGCAGCAGAGGCCGCTaGACATTGCGGAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SRWAKARVWCHLSPETKPCSRGR*TLRRWD
Trigger: GTCCCACCTCCGCAATGTGCAGCGGCCTCTGCTGCA...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTACAGCACACGACCCCTaGCCGGTAGGTACCCTGTTC +
Preference number: 4 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSTAHDP*PVGTLF
Trigger: GAACAGGGTACCTACCGGGCAGGGGTCGTGTGCTGT...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGGCAATGTGGGCAATGTaGATGAGGTCACGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLAMWAM*MRSRSF
Trigger: GAACGAGCGTGACCTCATGCACATTGCCCACATTGC...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTTGTTGGCCACCATCATaGGCAGATCAAAGACCTCGA +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGCWPPS*ADQRPR
Trigger: TCGAGGTCTTTGATCTGCGCATGATGGTGGCCAACA...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTTCACATCTGAGAAGGTaGCTTTTGCCAAGCACTCCT +
Preference number: 4 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSSHLRR*LLPSTP
Trigger: AGGAGTGCTTGGCAAAAGGCACCTTCTCAGATGTGA...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGATGTCTCGGGGGAACTTaGGGCACACGTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRCLGGT*GTRCCS
Trigger: ACTACAACAACGTGTGCCGCAAGTTCCCCCGAGACA...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCGGGTCTGGGGACCTCTaGAGGTGGTTCCCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPGSGDL*RWFPFC
Trigger: GCAGAACGGGAACCACCTGCAGAGGTCCCCAGACCC...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCTGCCCACAAAACAAATaGAACACTCAAGTCCGTCGG +
Preference number: 4 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPCPQNK*NTQVRR
Trigger: CCGACGGACTTGAGTGTTGCATTTGTTTTGTGGGCA...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTGACCAAACCCCTCTTTaGCGCCAGCCCGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSDQTPL*RQPGPL
Trigger: GAGGGGCCCGGGCTGGCGGCAAAGAGGGGTTTGGTC...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCGTTCTCGACCAGGTCTaGAGGAAGAAACAACACAAG +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLVLDQV*RKKQHK
Trigger: CTTGTGTTGTTTCTTCCTGCAGACCTGGTCGAGAAC...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR CCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACATGGTCTTGACATGGTaGAGGGAATTGGGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDMVLTW*RELGLA
Trigger: TGCCAACCCCAATTCCCTCCACCATGTCAAGACCAT...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCACATGGTCTTGACATaGTGGAGGGAATTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDHMVLT*WRELGL
Trigger: CAACCCCAATTCCCTCCACCATGTCAAGACCATGTG...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTCTCCCGACCCTTCTCTaGGGGCAGGATTTCATTAGG +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSLPTLL*GQDFIR
Trigger: CCTAATGAAATCCTGCCCCCAGAGAAGGGTCGGGAG...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCGGATGCCCAGCTCCTTaGCCACCTCCCGACCCTTCT +
Preference number: 4 (lower is better)
Translates to: SRWAKARVWCHLSPETKPGCPAP*PPPDPS
Trigger: AGAAGGGTCGGGAGGTGGCCAAGGAGCTGGGCATCC...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGTCGGGGGCGGTGGCTTaGGGGGTAGGAAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQSGAVA*GVGRVP
Trigger: AGGCACCCTTCCTACCCCCCAAGCCACCGCCCCCGA...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCACAGGTCATAGAACTTaGAGGAAGAGGTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLTGHRT*RKRWRG
Trigger: ACCTCTCCACCTCTTCCTCCAAGTTCTATGACCTGT...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTGGTGGTCCTCTGGGTaGGTGCCCCCTGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSWWSSG*VPPGSE
Trigger: CTCGGAGCCAGGGGGCACCCACCCAGAGGACCACCA...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCAGATCCCGTCGCTGGTaGAAGCACGGAGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPRSRRW*KHGGQQ
Trigger: CTGCTGGCCTCCGTGCTTCCACCAGCGACGGGATCT...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACAAGATCCCGTCGCTGGTaGAAGCACGGAGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTRSRRW*KHGGQQ
Trigger: CTGCTGGCCTCCGTGCTTCCACCAGCGACGGGATCT...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTGTAAGATCCCGTCGCTaGTGGAAGCACGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGAVRSRR*WKHGGQ
Trigger: CTGGCCTCCGTGCTTCCACCAGCGACGGGATCTTAC...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCGGAAGGGCCCCGGCTaGATGGAACTGTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGARKGPG*MELSIF
Trigger: GAAGATGGACAGTTCCATCCAGCCGGGGCCCTTCCG...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCACACGTTGTTGTAGTTaGTGCAGATGTGGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPTRCCS*CRCGGD
Trigger: GTCTCCACCACATCTGCACCAACTACAACAACGTGT...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTATACTCCTGGTTTTCTaGGGACATGGCCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSILLVF*GHGLHV
Trigger: GACATGAAGGCCATGTCCCCAGAAAACCAGGAGTAT...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGGGCTCAGCTCCTCTCTaGCTGAGCCACGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVGSAPL*LSHGGW
Trigger: CCAGCCACCGTGGCTCAGCCAGAGAGGAGCTGAGCC...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTTCTCCCGTCCTGCTTTaGGTCTGGGGACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGASPVLL*VWGPLQ
Trigger: CTGCAGAGGTCCCCAGACCCAAAGCAGGACGGGAGA...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGAGAAGCCCTGGAGGCTaGGAGGCTTTCCCTTTGACT +
Preference number: 4 (lower is better)
Translates to: IWPTGAGPSRITSACWEWRSPGG*EAFPLT
Trigger: AGTCAAAGGGAAAGCCTCCCAGCCTCCAGGGCTTCT...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACAGTGGGGCTGCCTCCCTaGCCAGAGCAGCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTVGLPP*PEQQPR
Trigger: TCTTGGTTGCTGCTCTGGCCAGGGAGGCAGCCCCAC...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTGCAAAAGCAAGAGTCTaGTGCCATTTAAGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGAKARV*CHLSPE
Trigger: CTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGC...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGTCTCAGGGAATCCCGTaGTCACTCTCCTATGGCTTC +
Preference number: 4 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLSQGIP*SLSYGF
Trigger: GAAGCCATAGGAGAGTGACCACGGGATTCCCTGAGA...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTCTGCCGGGTTGCATCTaGTTCCGACAGCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSLPGCI*FRQLSG
Trigger: CCCCGAGAGCTGTCGGAACCAGATGCAACCCGGCAG...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGCTGCCACCTCGCCTCTaGGGCTCTGCTGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVLPPRL*GSAGLS
Trigger: TGACAGGCCAGCAGAGCCCCAGAGGCGAGGTGGCAG...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR TCA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGCCACCACAACGCACTTaGTGGTCTCTACGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: GKIWPTGAGPSRITSACWPPQRT*WSLRLA
Trigger: GGCCAAACGTAGAGACCATCAAGTGCGTTGTGGTGG...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTACCTGCAGCACCAGGATaGCGTCCGCGCAGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLPAAPG*RPRRAG
Trigger: ACCCGCTCTGCGCGGACGTCATCCTGGTGCTGCAGG...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGGCCGGGATTTGTAGGTaGGAGGATCTTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: IWPTGAGPSRITSACWEWAGICR*EDLLPS
Trigger: AGATGGCAGAAGATCCTCTCACCTACAAATCCCGGC...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTGGTCGGGGCTGGAGGTaGACATGCCGGTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISGRGWR*TCRCRG
Trigger: ACCTCTACACCGGCATGTTCACCTCCAGCCCCGACC...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTGTGTACTGCTCTGTaGGGGCAACCAGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGALCTAL*GQPGVA
Trigger: TGCCACACCTGGTTGCCCTCACAGAGCAGTACACAG...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTTACGCACAGTGGAACTaGGCCAGTTCCAGGAACACA +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSYAQWN*ASSRNT
Trigger: TGTGTTCCTGGAACTGGCTCAGTTCCACTGTGCGTA...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCTGGGACTTCCAGAACTaGAGGTGGCGGCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SRWAKARVWCHLSPETKPWDFQN*RWRREM
Trigger: CATCTCCCGCCGCCACCTGCAGTTCTGGAAGTCCCA...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTTGGGACTTCCAGAACTaGAGGTGGCGGCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTWDFQN*RWRREM
Trigger: CATCTCCCGCCGCCACCTGCAGTTCTGGAAGTCCCA...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGGGACTTCCAGAACTaGAGGTGGCGGCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPWDFQN*RWRREM
Trigger: CATCTCCCGCCGCCACCTGCAGTTCTGGAAGTCCCA...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTTCTTGTGGGCAAAGATaGGCACCCGCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGASCGQR*APAPAA
Trigger: TGCTGCAGGAGCGGGTGCGCATCTTTGCCCACAAGA...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTGGTACCCTGTTCCGTTaGCCCGTAAGATCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSGTLFR*PVRSRR
Trigger: GCGACGGGATCTTACGGGGCAACGGAACAGGGTACC...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAACAGCACACGACCCCTaGCCGGTAGGTACCCTGTTC +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPTAHDP*PVGTLF
Trigger: GAACAGGGTACCTACCGGGCAGGGGTCGTGTGCTGT...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACAACAGCACACGACCCCTaGCCGGTAGGTACCCTGTTC +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTTAHDP*PVGTLF
Trigger: GAACAGGGTACCTACCGGGCAGGGGTCGTGTGCTGT...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTCCCGCATGCAGCTCTTaGTTGTGTAGGGAAACACCA +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSPACSS*LCRETP
Trigger: TGGTGTTTCCCTACACAAGCAAGAGCTGCATGCGGG...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCCCAGCACGGCCCGCATaGAGCTCTTGCTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPPARPA*SSCLCR
Trigger: CCTACACAAGCAAGAGCTGCATGCGGGCCGTGCTGG...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGCTCACGCTCCTTCCGTaGCCGCTGGTAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGLTLLP*PLVMIF
Trigger: GAAGATCATTACCAGCGGGCACGGAAGGAGCGTGAG...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTCGAGGATCACTTCTaGTTGCTGGGAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGALEDHF*LLGVGL
Trigger: CAGCCCCACTCCCAGCAAGCAGAAGTGATCCTCGAG...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCGGCTTCGTGTGGAAATaGCCACAAAACAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLGFVWK*PQNKCN
Trigger: GTTGCATTTGTTTTGTGGGCATTTCCACACGAAGCC...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGAGCACGGGGTCGCCGTaGACTCATTCCTACTTCCTT +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGSTGSP*THSYFL
Trigger: AAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCT...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTTCTCTAGACCAACTCTaGTTTTCCTCCTGCTCCATT +
Preference number: 4 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSSLDQL*FSSCSI
Trigger: AATGGAGCAGGAGGAAAAGCAGAGTTGGTCTAGAGA...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGCGGGAGGCCCAGGTGTaGCCCCACGCTGTCCATCTT +
Preference number: 4 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQREAQV*PHAVHL
Trigger: AAGATGGACAGCGTGGGGGCACACCTGGGCCTCCCG...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGTGGCACACACGATATTaGTCGATGGCCCATACTGTG +
Preference number: 4 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLWHTRY*SMAHTV
Trigger: CACAGTATGGGCCATCGACCAATATCGTGTGTGCCA...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGCGTTCCAGCACCTCCTaGCACACACGATATTGGTCG +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGRSSTS*HTRYWS
Trigger: CGACCAATATCGTGTGTGCCAGGAGGTGCTGGAACG...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGCGACGGTCTTTGTGGTaGTCTCCAAAGGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GKIWPTGAGPSRITSACWRRSLW*SPKVSQ
Trigger: CTGGGACACCTTTGGAGACCACCACAAAGACCGTCG...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTAAGCGACGGTCTTTGTaGTGGTCTCCAAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSKRRSL*WSPKVS
Trigger: GGACACCTTTGGAGACCACCACAAAGACCGTCGCTT...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGCATGGTGGAGGGAATTaGGGTTGGCAATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: IWPTGAGPSRITSACWEWHGGGN*GWQWRS
Trigger: GCTTCTCCATTGCCAACCCCAATTCCCTCCACCATG...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCGCACACGTCAAAGCTaGCTGCTCGGAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGARTRQS*LLGAGS
Trigger: ACTTCCTGCTCCGAGCAGCCAGCTTTGACGTGTGCG...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTGTAAGATCCCGTCGCTaGTGGAAGCACGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFVRSRR*WKHGGQ
Trigger: CTGGCCTCCGTGCTTCCACCAGCGACGGGATCTTAC...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCTTGGTCCGGCGGACGTaGAAGGCCTTGGTGATCTCC +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPLVRRT*KALVIS
Trigger: GGAGATCACCAAGGCCTTCCACGTCCGCCGGACCAA...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTACACCACCTCCCGGGTaGAGCTCTCCACAAATGGCC +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTTPPPG*SSPQMA
Trigger: GGCCATTTGTGGAGAGCTCCACCCGGGAGGTGGTGT...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTTTCTCGAAATACTCCTaGTTTTCTGGGGACATGGCC +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGFSKYS*FSGDMA
Trigger: GGCCATGTCCCCAGAAAACCAGGAGTATTTCGAGAA...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGCCACCCTCTGGGTCCTaGTTACGTGGGCCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQPPSGS*LRGPPG
Trigger: ACCAGGGGGCCCACGTAACCAGGACCCAGAGGGTGG...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAAAGAGCTCCACCCTCTaGGTCCTGGTTACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPKSSTL*VLVTWA
Trigger: GGCCCACGTAACCAGGACCCAGAGGGTGGAGCTCTT...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTCTGGCTGAGCCACGGTaGCTGGTAAGAAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSLAEPR*LVRRAP
Trigger: TGGAGCTCTTCTTACCAGCCACCGTGGCTCAGCCAG...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGGGCTCAGCTCCTCTCTaGCTGAGCCACGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQGSAPL*LSHGGW
Trigger: CCAGCCACCGTGGCTCAGCCAGAGAGGAGCTGAGCC...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCCACACAGAGAAGCCCTaGAGGCTGGGAGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPHTEKP*RLGGFP
Trigger: GGGAAAGCCTCCCAGCCTCCAGGGCTTCTCTGTGTG...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTCACACAGAGAAGCCCTaGAGGCTGGGAGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSHTEKP*RLGGFP
Trigger: GGGAAAGCCTCCCAGCCTCCAGGGCTTCTCTGTGTG...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACACTGCCCCATGGGGGCTaGGAGCTAGTTTCAATCCCC +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTLPHGG*ELVSIP
Trigger: GGGGATTGAAACTAGCTCCCAGCCCCCATGGGGCAG...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGCTGCCGGGTTGCATCTaGTTCCGACAGCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVLPGCI*FRQLSG
Trigger: CCCCGAGAGCTGTCGGAACCAGATGCAACCCGGCAG...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCCCCAGGAGAGTTCTCTaGGCTGCCGGGTTGCATCTG +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPPRRVL*AAGLHL
Trigger: CAGATGCAACCCGGCAGCCCAGAGAACTCTCCTGGG...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAGGGACCGCGCTTTCATaGCACCCCTCTCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPGTALS*HPSPGT
Trigger: TGTTCCAGGAGAGGGGTGCCATGAAAGCGCGGTCCC...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522948.5
CDS-3UTR TCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTTGTCAAAGACGTCCTTaGTGCCGAACTGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGACQRRP*CRTGPP
Trigger: TGGTGGCCCAGTTCGGCATCAAGGACGTCTTTGACA...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGGTTTGGGCTGCCGCTTaGGGTGGAGGTAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVVWAAA*GGGSPP
Trigger: AGGAGGACTACCTCCACCTCAAGCGGCAGCCCAAAC...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGTCTCCAGTGAGGGTGTaGGTAGGCTTCGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GKIWPTGAGPSRITSACWSPVRV*VGFVWK
Trigger: TTTCCACACGAAGCCTACTCACACCCTCACTGGAGA...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTGCCTGGAGCTCTGAATaGCCTGTGTCCCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSAWSSE*PVSPFS
Trigger: TGAGAATGGGGACACAGGTCATTCAGAGCTCCAGGC...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTTGCCGAGTCCTTTCCTaGAAGGCATTGGAGTCGATT +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSCRVLS*KALESI
Trigger: AATCGACTCCAATGCCTTTCAGGAAAGGACTCGGCA...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACGGGACATGCTGTCTaGAGAGGTCTTCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISTGHAV*RGLLGA
Trigger: GGCCCCCAGAAGACCTCTTCAGACAGCATGTCCCGT...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR GCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTAGAAGACGCCTGGCGCTaGAGTCCCAGGTACCGCTCG +
Preference number: 4 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLEDAWR*SPRYRS
Trigger: CGAGCGGTACCTGGGACTGCAGCGCCAGGCGTCTTC...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS-3UTR GCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCACCAAGATGACAGGTaGTCGGGGGCAGAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGAHQDDR*SGAEVL
Trigger: AAGCACTTCTGCCCCCGAGCACCTGTCATCTTGGTG...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTGCGGCGGGAGATGAGTaGAGCTCGGATGGCGTTGTC +
Preference number: 4 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSAAGDE*SSDGVV
Trigger: GACAACGCCATCCGAGCTGCACTCATCTCCCGCCGC...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTATGCGCACCCGCTCCTaGAGCACCAGGATGACGTCC +
Preference number: 4 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSMRTRS*STRMTS
Trigger: GGACGTCATCCTGGTGCTGCAGGAGCGGGTGCGCAT...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACATCTTGTGGGCAAAGATaGGCACCCGCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTSCGQR*APAPAA
Trigger: TGCTGCAGGAGCGGGTGCGCATCTTTGCCCACAAGA...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCACACGTCAAAGCTGGCTaGTCGGAGCAGGAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPHVKAG*SEQEVS
Trigger: CGAGACTTCCTGCTCCGAGCAGCCAGCTTTGACGTG...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTGGTACCCTGTTCCGTTaGCCCGTAAGATCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISGTLFR*PVRSRR
Trigger: GCGACGGGATCTTACGGGGCAACGGAACAGGGTACC...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGGGTACCCTGTTCCGTTaGCCCGTAAGATCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVGTLFR*PVRSRR
Trigger: GCGACGGGATCTTACGGGGCAACGGAACAGGGTACC...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGCAATGTGGGCAATGTaGATGAGGTCACGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: GKIWPTGAGPSRITSACWAMWAM*MRSRSF
Trigger: GAACGAGCGTGACCTCATGCACATTGCCCACATTGC...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCACTCGAGGATCACTTCTaGTTGCTGGGAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPLEDHF*LLGVGL
Trigger: CAGCCCCACTCCCAGCAAGCAGAAGTGATCCTCGAG...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCCTCGAGGATCACTTCTaGTTGCTGGGAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRWAKARVWCHLSPETKPLEDHF*LLGVGL
Trigger: CAGCCCCACTCCCAGCAAGCAGAAGTGATCCTCGAG...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGTGCCCACAAAACAAATaGAACACTCAAGTCCGTCGG +
Preference number: 4 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLCPQNK*NTQVRR
Trigger: CCGACGGACTTGAGTGTTGCATTTGTTTTGTGGGCA...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCACCACGTCTGGCCTTTTaGAGCTGCACCCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPPRLAF*SCTPGC
Trigger: ACATCCTGGGGTGCAGCTGCAAAAGGCCAGACGTGG...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGAGAGTTCTCTGGGCTaGCGGGTTGCATCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTESSLG*RVASGS
Trigger: GGAACCAGATGCAACCCGGCAGCCCAGAGAACTCTC...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTCACGATATTGGTCGATaGCCCATACTGTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSHDIGR*PILWAH
Trigger: ATGTGCCCACAGTATGGGCCATCGACCAATATCGTG...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACTGGGCCACCACGCTaGTCTCATAGTAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPTGPPR*SHSRGC
Trigger: GCATCCCCTACTATGAGACCAGCGTGGTGGCCCAGT...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTACTGGGCCACCACGCTaGTCTCATAGTAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFTGPPR*SHSRGC
Trigger: GCATCCCCTACTATGAGACCAGCGTGGTGGCCCAGT...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCTCCTTGATGCCGAACTaGGCCACCACGCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPSLMPN*ATTLVS
Trigger: TGAGACCAGCGTGGTGGCCCAGTTCGGCATCAAGGA...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTCCTTGATGCCGAACTaGGCCACCACGCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPSLMPN*ATTLVS
Trigger: TGAGACCAGCGTGGTGGCCCAGTTCGGCATCAAGGA...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTTTCCAGAACTGCAGGTaGCGGCGGGAGATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSFQNCR*RREMSA
Trigger: TGCACTCATCTCCCGCCGCCACCTGCAGTTCTGGAA...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTTCCAGAACTGCAGGTaGCGGCGGGAGATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPFQNCR*RREMSA
Trigger: TGCACTCATCTCCCGCCGCCACCTGCAGTTCTGGAA...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTTGCACATTGCGGAGGTaGGACTTCCAGAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSCTLRR*DFQNCR
Trigger: CCTGCAGTTCTGGAAGTCCCACCTCCGCAATGTGCA...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCACGCACACGTCAAAGCTaGCTGCTCGGAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPRTRQS*LLGAGS
Trigger: ACTTCCTGCTCCGAGCAGCCAGCTTTGACGTGTGCG...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTAGCAGCTCAGCAATGTaGGCAATGTGCATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSSSSAM*AMCMRS
Trigger: TGACCTCATGCACATTGCCCACATTGCTGAGCTGCT...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTAGAAGCCCTGGAGGCTaGGAGGCTTTCCCTTTGACT +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGARSPGG*EAFPLT
Trigger: AGTCAAAGGGAAAGCCTCCCAGCCTCCAGGGCTTCT...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTGTAGAAGCCTTGAGTTaGGCTCTGAAGGCTCAATTT +
Preference number: 4 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGVEALS*ALKAQF
Trigger: AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTAC...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCCACCACAACGCACTTaGTGGTCTCTACGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFPPQRT*WSLRLA
Trigger: GGCCAAACGTAGAGACCATCAAGTGCGTTGTGGTGG...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTAGCAGCTGGTACTGGGTaGGGGTGGCATTGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLAAGTG*GWHCKR
Trigger: GCGCTTGCAATGCCACCCTCACCCAGTACCAGCTGC...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGGGCGCAGAGAGACGCTaGCATCATCTACCACGTCTC +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVGAERR*HHLPRL
Trigger: GAGACGTGGTAGATGATGTCAGCGTCTCTCTGCGCC...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCTGTCAAAGACGTCCTTaGTGCCGAACTGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPCQRRP*CRTGPP
Trigger: TGGTGGCCCAGTTCGGCATCAAGGACGTCTTTGACA...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTACCGTGTACAGGTACTTaGGGACAGCCCGGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLPCTGT*GQPGRA
Trigger: GGCCCTTCCGGGCTGTCCTCAAGTACCTGTACACGG...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp TTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCTGTGTACTGCTCTGTaGGGGCAACCAGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LTLGLSNPEIKCQGSSLLLCTAL*GQPGVA
Trigger: TGCCACACCTGGTTGCCCTCACAGAGCAGTACACAG...GAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCCTGGAGCTCTGAATaGCCTGTGTCCCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTAWSSE*PVSPFS
Trigger: TGAGAATGGGGACACAGGTCATTCAGAGCTCCAGGC...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTCACCAAGATGACAGGTaGTCGGGGGCAGAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTHQDDR*SGAEVL
Trigger: AAGCACTTCTGCCCCCGAGCACCTGTCATCTTGGTG...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACACTCACGCTCCTTCCGTaGCCGCTGGTAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTLTLLP*PLVMIF
Trigger: GAAGATCATTACCAGCGGGCACGGAAGGAGCGTGAG...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTAGGGTCTGGGGACCTCTaGAGGTGGTTCCCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLGSGDL*RWFPFC
Trigger: GCAGAACGGGAACCACCTGCAGAGGTCCCCAGACCC...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTGGCCTTTTGCAGCTaGACCCCAGGATGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFLAFCS*TPGCRS
Trigger: GCTTCTACATCCTGGGGTGCAGCTGCAAAAGGCCAG...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCCACGTCTGGCCTTTTaGAGCTGCACCCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: LTLGLSNPEIKCQGSSLLPRLAF*SCTPGC
Trigger: ACATCCTGGGGTGCAGCTGCAAAAGGCCAGACGTGG...GAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTTGCACCAAGAGGCACTaGTTCCAGGCCTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISCTKRH*FQAWSS
Trigger: AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCA...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTCGTTCCAGCACCTCCTaGCACACACGATATTGGTCG +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTRSSTS*HTRYWS
Trigger: CGACCAATATCGTGTGTGCCAGGAGGTGCTGGAACG...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACACGACGGTCTTTGTGGTaGTCTCCAAAGGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTRRSLW*SPKVSQ
Trigger: CTGGGACACCTTTGGAGACCACCACAAAGACCGTCG...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCATGGTGGAGGGAATTaGGGTTGGCAATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGAHGGGN*GWQWRS
Trigger: GCTTCTCCATTGCCAACCCCAATTCCCTCCACCATG...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACACTCCCGACCCTTCTCTaGGGGCAGGATTTCATTAGG +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTLPTLL*GQDFIR
Trigger: CCTAATGAAATCCTGCCCCCAGAGAAGGGTCGGGAG...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGACTGGGCCACCACGCTaGTCTCATAGTAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVTGPPR*SHSRGC
Trigger: GCATCCCCTACTATGAGACCAGCGTGGTGGCCCAGT...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTTGCACATTGCGGAGGTaGGACTTCCAGAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFCTLRR*DFQNCR
Trigger: CCTGCAGTTCTGGAAGTCCCACCTCCGCAATGTGCA...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTACAGGTCATAGAACTTaGAGGAAGAGGTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSTGHRT*RKRWRG
Trigger: ACCTCTCCACCTCTTCCTCCAAGTTCTATGACCTGT...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTAGGGCCCCGGCTGGATaGAACTGTCCATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISRAPAG*NCPSSP
Trigger: TGGTGAAGATGGACAGTTCCATCCAGCCGGGGCCCT...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTTGGTCCGGCGGACGTaGAAGGCCTTGGTGATCTCC +
Preference number: 4 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSLVRRT*KALVIS
Trigger: GGAGATCACCAAGGCCTTCCACGTCCGCCGGACCAA...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTATCAACAGGGGCTTGTaGGCGCTGATGGTGCCATCA +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTINRGL*ALMVPS
Trigger: TGATGGCACCATCAGCGCCCACAAGCCCCTGTTGAT...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCATCAACAGGGGCTTGTaGGCGCTGATGGTGCCATCA +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPINRGL*ALMVPS
Trigger: TGATGGCACCATCAGCGCCCACAAGCCCCTGTTGAT...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAATGTCCACCATCATCTaGGTCGCTTCCATCAGCCCG +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPMSTII*VASISP
Trigger: CGGGCTGATGGAAGCGACCCAGATGATGGTGGACAT...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCATGTCCACCATCATCTaGGTCGCTTCCATCAGCCCG +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPMSTII*VASISP
Trigger: CGGGCTGATGGAAGCGACCCAGATGATGGTGGACAT...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGATACTCCTGGTTTTCTaGGGACATGGCCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: IWPTGAGPSRITSACWEWILLVF*GHGLHV
Trigger: GACATGAAGGCCATGTCCCCAGAAAACCAGGAGTAT...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAAGGGTCAGAAGAGGGTaGCAGCATCTCAGACCACAG +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPRVRRG*QHLRPQ
Trigger: CTGTGGTCTGAGATGCTGCCACCCTCTTCTGACCCT...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCAGGGTCAGAAGAGGGTaGCAGCATCTCAGACCACAG +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPRVRRG*QHLRPQ
Trigger: CTGTGGTCTGAGATGCTGCCACCCTCTTCTGACCCT...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGAAGAGCTCCACCCTCTaGGTCCTGGTTACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQKSSTL*VLVTWA
Trigger: GGCCCACGTAACCAGGACCCAGAGGGTGGAGCTCTT...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTGGGACGGAGGGACACTaGCAGGATACAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSGTEGH*QDTGLS
Trigger: GGAAAGGCCTGTATCCTGCCAGTGTCCCTCCGTCCC...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCGGTACCACATGGTCTTaGCATGGTGGAGGGAATTGG +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPGTTWS*HGGGNW
Trigger: CCAATTCCCTCCACCATGTCAAGACCATGTGGTACC...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCTGTGGGCAATGTGCATaGGGTCACGCTCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SRWAKARVWCHLSPETKPCGQCA*GHARSH
Trigger: ATGAGAACGAGCGTGACCTCATGCACATTGCCCACA...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTTGCCATCATCCAGGATaGAGGTCACATCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSCHHPG*RSHLRR
Trigger: CCTTCTCAGATGTGACCTTCATCCTGGATGATGGCA...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTCTGTGTACTGCTCTGTaGGGGCAACCAGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSLCTAL*GQPGVA
Trigger: TGCCACACCTGGTTGCCCTCACAGAGCAGTACACAG...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCTCTCCAGTGAGGGTGTaGGTAGGCTTCGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPSPVRV*VGFVWK
Trigger: TTTCCACACGAAGCCTACTCACACCCTCACTGGAGA...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGGCCTGGAGCTCTGAATaGCCTGTGTCCCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVAWSSE*PVSPFS
Trigger: TGAGAATGGGGACACAGGTCATTCAGAGCTCCAGGC...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAGAGAAAGTTATATGTTaGCCTTCAGAAGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RKSRGVKADGDNSSRVRREKVIC*PSEVVH
Trigger: GTGGACCACTTCTGAAGGTCAACATATAACTTTCTC...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR GCA 90 bp TTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCTCTCATAGTAGGGGATaGCCAGCTCCTTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LTLGLSNPEIKCQGSSLLSHSRG*PAPWPP
Trigger: AGGTGGCCAAGGAGCTGGGCATCCCCTACTATGAGA...GAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGTCACATCTGAGAAGGTaGCTTTTGCCAAGCACTCCT +
Preference number: 4 (lower is better)
Translates to: GKIWPTGAGPSRITSACWSHLRR*LLPSTP
Trigger: AGGAGTGCTTGGCAAAAGGCACCTTCTCAGATGTGA...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTCCCGCATGCAGCTCTTaGTTGTGTAGGGAAACACCA +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTPACSS*LCRETP
Trigger: TGGTGTTTCCCTACACAAGCAAGAGCTGCATGCGGG...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCCCCGCATGCAGCTCTTaGTTGTGTAGGGAAACACCA +
Preference number: 4 (lower is better)
Translates to: SRWAKARVWCHLSPETKPPACSS*LCRETP
Trigger: TGGTGTTTCCCTACACAAGCAAGAGCTGCATGCGGG...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAACAGGTGGCCACCGATaGTTCTCGAAATACTCCTGG +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPTGGHR*FSKYSW
Trigger: CCAGGAGTATTTCGAGAAGCATCGGTGGCCACCTGT...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTGCACCAAGAGGCACTaGTTCCAGGCCTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSCTKRH*FQAWSS
Trigger: AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCA...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCGTAAGGAAGGGAGCCTaGAGTCTCCAGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPVRKGA*SLQMGK
Trigger: TTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTAC...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTTGGCACACACGATATTaGTCGATGGCCCATACTGTG +
Preference number: 4 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSWHTRY*SMAHTV
Trigger: CACAGTATGGGCCATCGACCAATATCGTGTGTGCCA...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGCGTTCCAGCACCTCCTaGCACACACGATATTGGTCG +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVRSSTS*HTRYWS
Trigger: CGACCAATATCGTGTGTGCCAGGAGGTGCTGGAACG...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTCGACGGTCTTTGTGGTaGTCTCCAAAGGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISRRSLW*SPKVSQ
Trigger: CTGGGACACCTTTGGAGACCACCACAAAGACCGTCG...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTCATGGTGGAGGGAATTaGGGTTGGCAATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTHGGGN*GWQWRS
Trigger: GCTTCTCCATTGCCAACCCCAATTCCCTCCACCATG...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTATGGTCTTGACATGGTaGAGGGAATTGGGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGAMVLTW*RELGLA
Trigger: TGCCAACCCCAATTCCCTCCACCATGTCAAGACCAT...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCTCCCGACCCTTCTCTaGGGGCAGGATTTCATTAGG +
Preference number: 4 (lower is better)
Translates to: LTLGLSNPEIKCQGSSLLLPTLL*GQDFIR
Trigger: CCTAATGAAATCCTGCCCCCAGAGAAGGGTCGGGAG...GAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTAGCAGCTCAGCAATGTaGGCAATGTGCATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSSSSAM*AMCMRS
Trigger: TGACCTCATGCACATTGCCCACATTGCTGAGCTGCT...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGACACGTTGTTGTAGTTaGTGCAGATGTGGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGTRCCS*CRCGGD
Trigger: GTCTCCACCACATCTGCACCAACTACAACAACGTGT...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGATACTCCTGGTTTTCTaGGGACATGGCCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGILLVF*GHGLHV
Trigger: GACATGAAGGCCATGTCCCCAGAAAACCAGGAGTAT...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTACTCAAGTCCGTCGGTaGAAAGATATGGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSTQVRR*KDMANR
Trigger: CCTGTTGGCCATATCTTTCCACCGACGGACTTGAGT...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTGTAGAAGCCTTGAGTTaGGCTCTGAAGGCTCAATTT +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSVEALS*ALKAQF
Trigger: AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTAC...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCCCTGCAGTCTCCAGATaGGCAAAAGCAAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPPAVSR*AKARVW
Trigger: CCAGACTCTTGCTTTTGCCCATCTGGAGACTGCAGG...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTCACCTAAAAAGAGTGTaGGTGGTGAAATCTGAGTCG +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSHLKRV*VVKSES
Trigger: CGACTCAGATTTCACCACCCACACTCTTTTTAGGTG...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTTCTGAAGAGGTCTTCTaGGGGCCATCGGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISSEEVF*GPSGPF
Trigger: AAAAGGCCCCGATGGCCCCCAGAAGACCTCTTCAGA...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR TCA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGCTGTTTATAGAAATGTaGGCTAGGCAGGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: IWPTGAGPSRITSACWEWLFIEM*ARQGLF
Trigger: AAAAAGCCCCTGCCTAGCTCACATTTCTATAAACAG...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCACTATTCCCTGTCCTaGAGTAGTGTTCTCGACCAG +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFHYSLS*SSVLDQ
Trigger: CTGGTCGAGAACACTACTTCAGGACAGGGAATAGTG...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR GCA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACCACGTCAAAGCTGGCTaGTCGGAGCAGGAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: AESFPERHWSRFCNLNLHHVKAG*SEQEVS
Trigger: CGAGACTTCCTGCTCCGAGCAGCCAGCTTTGACGTG...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGCCATCTCTTCCTGGATaGTCACAAAAGCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVPSLPG*SQKLGS
Trigger: GGAGCCGAGCTTTTGTGAGCATCCAGGAAGAGATGG...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTCCATCTCTTCCTGGATaGTCACAAAAGCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISPSLPG*SQKLGS
Trigger: GGAGCCGAGCTTTTGTGAGCATCCAGGAAGAGATGG...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACAGGTGGCCACCGATaGTTCTCGAAATACTCCTGG +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISTGGHR*FSKYSW
Trigger: CCAGGAGTATTTCGAGAAGCATCGGTGGCCACCTGT...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTCTGGCCTTTTGCAGCTaGACCCCAGGATGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSLAFCS*TPGCRS
Trigger: GCTTCTACATCCTGGGGTGCAGCTGCAAAAGGCCAG...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTGTAAGGAAGGGAGCCTaGAGTCTCCAGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISVRKGA*SLQMGK
Trigger: TTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTAC...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACAGTGGTCCACTGCGCGTaGATATTCTTGTTTACTGCC +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTVVHCA*IFLFTA
Trigger: GGCAGTAAACAAGAATATGCACGCGCAGTGGACCAC...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR CCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACAATGGTCTTGACATGGTaGAGGGAATTGGGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTMVLTW*RELGLA
Trigger: TGCCAACCCCAATTCCCTCCACCATGTCAAGACCAT...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGTGCACATTGCGGAGGTaGGACTTCCAGAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQCTLRR*DFQNCR
Trigger: CCTGCAGTTCTGGAAGTCCCACCTCCGCAATGTGCA...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCTCTGCCATCTCTTCCTaGATGCTCACAAAAGCTCGG +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPSAISS*MLTKAR
Trigger: CCGAGCTTTTGTGAGCATCCAGGAAGAGATGGCAGA...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTCCATCCAGTCACAGCTaGAAATCAACAGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTPSSHS*KSTGAC
Trigger: ACAAGCCCCTGTTGATTTCCAGCTGTGACTGGATGG...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTACTCAAGTCCGTCGGTaGAAAGATATGGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFTQVRR*KDMANR
Trigger: CCTGTTGGCCATATCTTTCCACCGACGGACTTGAGT...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACTCAAGTCCGTCGGTaGAAAGATATGGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPTQVRR*KDMANR
Trigger: CCTGTTGGCCATATCTTTCCACCGACGGACTTGAGT...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGTAGAAGCCTTGAGTTaGGCTCTGAAGGCTCAATTT +
Preference number: 4 (lower is better)
Translates to: GKIWPTGAGPSRITSACWVEALS*ALKAQF
Trigger: AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTAC...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCGTTTCGGTTTCAGTTTaGTTGTCATTGGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPVSVSV*LSLVFV
Trigger: AACAAAAACCAATGACAACCAAACTGAAACCGAAAC...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTTTTCCTGAAAGGCATTaGAGTCGATTCTGCAACCTA +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSFPERH*SRFCNL
Trigger: TAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAA...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGCACCTAAAAAGAGTGTaGGTGGTGAAATCTGAGTCG +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGHLKRV*VVKSES
Trigger: CGACTCAGATTTCACCACCCACACTCTTTTTAGGTG...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCGTTGACCTTCAGAAGTaGTCCACTGCGCGTGCATAT +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPVDLQK*STARAY
Trigger: ATATGCACGCGCAGTGGACCACTTCTGAAGGTCAAC...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR TCA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACCCACCACAACGCACTTaGTGGTCTCTACGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: AESFPERHWSRFCNLNLHPPQRT*WSLRLA
Trigger: GGCCAAACGTAGAGACCATCAAGTGCGTTGTGGTGG...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGTGCCATCATCCAGGATaGAGGTCACATCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVCHHPG*RSHLRR
Trigger: CCTTCTCAGATGTGACCTTCATCCTGGATGATGGCA...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTGGACAGAGTGTTTGTTaGTTTTTCGTTTCGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSGQSVC*FFVSVS
Trigger: TGAAACCGAAACGAAAAATCAACAAACACTCTGTCC...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGTGCCGAGTCCTTTCCTaGAAGGCATTGGAGTCGATT +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVCRVLS*KALESI
Trigger: AATCGACTCCAATGCCTTTCAGGAAAGGACTCGGCA...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACTCTCATAGTAGGGGATaGCCAGCTCCTTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: AESFPERHWSRFCNLNLHSHSRG*PAPWPP
Trigger: AGGTGGCCAAGGAGCTGGGCATCCCCTACTATGAGA...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTTCACATCTGAGAAGGTaGCTTTTGCCAAGCACTCCT +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFSHLRR*LLPSTP
Trigger: AGGAGTGCTTGGCAAAAGGCACCTTCTCAGATGTGA...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTGTCTCGGGGGAACTTaGGGCACACGTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSCLGGT*GTRCCS
Trigger: ACTACAACAACGTGTGCCGCAAGTTCCCCCGAGACA...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGCCCACAAAACAAATaGAACACTCAAGTCCGTCGG +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPCPQNK*NTQVRR
Trigger: CCGACGGACTTGAGTGTTGCATTTGTTTTGTGGGCA...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTAAGCACGGGGTCGCCGTaGACTCATTCCTACTTCCTT +
Preference number: 4 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLSTGSP*THSYFL
Trigger: AAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCT...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp TTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCAAAGCAAGAGTCTGGTaGCATTTAAGCCCCGAGACC +
Preference number: 4 (lower is better)
Translates to: LTLGLSNPEIKCQGSSLLKARVW*HLSPET
Trigger: GGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTT...GAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCCTGGTCATTAGGTCCTaGCTGCTACCTTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPLVIRS*LLPLFQ
Trigger: CTGAAACAAAGGTAGCAGGCAGGACCTAATGACCAG...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTCTGGTCATTAGGTCCTaGCTGCTACCTTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTLVIRS*LLPLFQ
Trigger: CTGAAACAAAGGTAGCAGGCAGGACCTAATGACCAG...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGATGGTCTCTACGTTTaGCCTTTCATAATCCATGTC +
Preference number: 4 (lower is better)
Translates to: GKIWPTGAGPSRITSACWDGLYV*PFIIHV
Trigger: GACATGGATTATGAAAGGCCAAACGTAGAGACCATC...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTCACATGGTCTTGACATaGTGGAGGGAATTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISHMVLT*WRELGL
Trigger: CAACCCCAATTCCCTCCACCATGTCAAGACCATGTG...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCACAGGTCATAGAACTTaGAGGAAGAGGTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPTGHRT*RKRWRG
Trigger: ACCTCTCCACCTCTTCCTCCAAGTTCTATGACCTGT...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTTCTGCCATCTCTTCCTaGATGCTCACAAAAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISSAISS*MLTKAR
Trigger: CCGAGCTTTTGTGAGCATCCAGGAAGAGATGGCAGA...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGCCATCCAGTCACAGCTaGAAATCAACAGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVPSSHS*KSTGAC
Trigger: ACAAGCCCCTGTTGATTTCCAGCTGTGACTGGATGG...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACAACACGTTGTTGTAGTTaGTGCAGATGTGGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTTRCCS*CRCGGD
Trigger: GTCTCCACCACATCTGCACCAACTACAACAACGTGT...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTTTCTCGAAATACTCCTaGTTTTCTGGGGACATGGCC +
Preference number: 4 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTFSKYS*FSGDMA
Trigger: GGCCATGTCCCCAGAAAACCAGGAGTATTTCGAGAA...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACAGGGTCAGAAGAGGGTaGCAGCATCTCAGACCACAG +
Preference number: 4 (lower is better)
Translates to: AESFPERHWSRFCNLNLHRVRRG*QHLRPQ
Trigger: CTGTGGTCTGAGATGCTGCCACCCTCTTCTGACCCT...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTCTGATTTTCATTCTTTaGAGGGATAGAGGACAGAGT +
Preference number: 4 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSLIFIL*RDRGQS
Trigger: ACTCTGTCCTCTATCCCTCCAAAGAATGAAAATCAG...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTTTCACCTCCTCATCATaGGGGCCTCTGTTTATAGAA +
Preference number: 4 (lower is better)
Translates to: VREKFLVAPRGTASRPGAFTSSS*GPLFIE
Trigger: TTCTATAAACAGAGGCCCCCATGATGAGGAGGTGAA...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGTGTTGGCCACCATCATaGGCAGATCAAAGACCTCGA +
Preference number: 4 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQCWPPS*ADQRPR
Trigger: TCGAGGTCTTTGATCTGCGCATGATGGTGGCCAACA...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACAGGCTTCGTGTGGAAATaGCCACAAAACAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTGFVWK*PQNKCN
Trigger: GTTGCATTTGTTTTGTGGGCATTTCCACACGAAGCC...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTGGCTTCGTGTGGAAATaGCCACAAAACAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: AAAPQDVEALSWALKAQFGFVWK*PQNKCN
Trigger: GTTGCATTTGTTTTGTGGGCATTTCCACACGAAGCC...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR GCA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCTCTCTAGACCAACTCTaGTTTTCCTCCTGCTCCATT +
Preference number: 4 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPSLDQL*FSSCSI
Trigger: AATGGAGCAGGAGGAAAAGCAGAGTTGGTCTAGAGA...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACAAGCGACGGTCTTTGTaGTGGTCTCCAAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: AESFPERHWSRFCNLNLHKRRSL*WSPKVS
Trigger: GGACACCTTTGGAGACCACCACAAAGACCGTCGCTT...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGAGCAGCTCAGCAATGTaGGCAATGTGCATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQSSSAM*AMCMRS
Trigger: TGACCTCATGCACATTGCCCACATTGCTGAGCTGCT...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGTTCTCGAAATACTCCTaGTTTTCTGGGGACATGGCC +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVFSKYS*FSGDMA
Trigger: GGCCATGTCCCCAGAAAACCAGGAGTATTTCGAGAA...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGCTGATTTTCATTCTTTaGAGGGATAGAGGACAGAGT +
Preference number: 4 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGLIFIL*RDRGQS
Trigger: ACTCTGTCCTCTATCCCTCCAAAGAATGAAAATCAG...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
3UTR CAA 72 bp TTTTGCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTaGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: FCSCTPGCRSLE*GSEGSISTLTS
Trigger: AGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACTGCCATCATCCAGGATaGAGGTCACATCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: AESFPERHWSRFCNLNLHCHHPG*RSHLRR
Trigger: CCTTCTCAGATGTGACCTTCATCCTGGATGATGGCA...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCCTGTTTATAGAAATGTaGGCTAGGCAGGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: APQDVEALSWALKAQFLPLFIEM*ARQGLF
Trigger: AAAAAGCCCCTGCCTAGCTCACATTTCTATAAACAG...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTATGTTGGCCACCATCATaGGCAGATCAAAGACCTCGA +
Preference number: 4 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLCWPPS*ADQRPR
Trigger: TCGAGGTCTTTGATCTGCGCATGATGGTGGCCAACA...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCACATTGGAGTCGATTCTaGAACCTAAATCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPHWSRF*NLNLHL
Trigger: GAGGTGAAGATTTAGGTTGCAGAATCGACTCCAATG...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGCCATTAAACGGGACATaGTGTCTGAAGAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVPLNGT*CLKRSS
Trigger: AGAAGACCTCTTCAGACAGCATGTCCCGTTTAATGG...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR CCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAGATGGTCTCTACGTTTaGCCTTTCATAATCCATGTC +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPDGLYV*PFIIHV
Trigger: GACATGGATTATGAAAGGCCAAACGTAGAGACCATC...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTACACGATATTGGTCGATaGCCCATACTGTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLHDIGR*PILWAH
Trigger: ATGTGCCCACAGTATGGGCCATCGACCAATATCGTG...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTACCATCCAGTCACAGCTaGAAATCAACAGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLPSSHS*KSTGAC
Trigger: ACAAGCCCCTGTTGATTTCCAGCTGTGACTGGATGG...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCATTTCCTGAAAGGCATTaGAGTCGATTCTGCAACCTA +
Preference number: 4 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPFPERH*SRFCNL
Trigger: TAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAA...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTAGCAAAAGCAAGAGTCTaGTGCCATTTAAGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLAKARV*CHLSPE
Trigger: CTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGC...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTAAGGGTTTTAAGGGCTaGGATCCAAAGTCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISKGFKG*DPKSSL
Trigger: TAAGCTGGACTTTGGATCCCAGCCCTTAAAACCCTT...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR GCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTCATTGGAGTCGATTCTaGAACCTAAATCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISHWSRF*NLNLHL
Trigger: GAGGTGAAGATTTAGGTTGCAGAATCGACTCCAATG...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTTCATTAGGTCCTGCCTaGTACCTTTGTTTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISSLGPA*YLCFRL
Trigger: TAACCTGAAACAAAGGTAGCAGGCAGGACCTAATGA...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGTCATTAGGTCCTGCCTaGTACCTTTGTTTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVSLGPA*YLCFRL
Trigger: TAACCTGAAACAAAGGTAGCAGGCAGGACCTAATGA...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR GCA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCAGAAGTGGTCCACTaGGCGTGCATATTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSSEVVH*ACIFLF
Trigger: AAACAAGAATATGCACGCGCAGTGGACCACTTCTGA...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR CCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTGATGGTCTCTACGTTTaGCCTTTCATAATCCATGTC +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISDGLYV*PFIIHV
Trigger: GACATGGATTATGAAAGGCCAAACGTAGAGACCATC...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACACTGATTTTCATTCTTTaGAGGGATAGAGGACAGAGT +
Preference number: 4 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTLIFIL*RDRGQS
Trigger: ACTCTGTCCTCTATCCCTCCAAAGAATGAAAATCAG...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTTCACCTCCTCATCATaGGGGCCTCTGTTTATAGAA +
Preference number: 4 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSFTSSS*GPLFIE
Trigger: TTCTATAAACAGAGGCCCCCATGATGAGGAGGTGAA...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR TCA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTGGACAGAGTGTTTGTTaGTTTTTCGTTTCGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SCTPGCRSLELGSEGSISGQSVC*FFVSVS
Trigger: TGAAACCGAAACGAAAAATCAACAAACACTCTGTCC...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR TCA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGGGACAGAGTGTTTGTTaGTTTTTCGTTTCGGTTTCA +
Preference number: 4 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQGQSVC*FFVSVS
Trigger: TGAAACCGAAACGAAAAATCAACAAACACTCTGTCC...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CCA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTGTTTCGGTTTCAGTTTaGTTGTCATTGGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSVSVSV*LSLVFV
Trigger: AACAAAAACCAATGACAACCAAACTGAAACCGAAAC...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CCA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGGTTTCGGTTTCAGTTTaGTTGTCATTGGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: LELGSEGSISTLTSPVRVVSVSV*LSLVFV
Trigger: AACAAAAACCAATGACAACCAAACTGAAACCGAAAC...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS GCA 90 bp AGCCCAGGCCGGACGTGGGCCCAGGAGCGGACGCGCGCGCTGCACTaGAGCCGCTGCCCCTTCCGGATCAGCATCGCCCCGCGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: SPGRTWAQERTRALH*SRCPFRISIAPRAR
Trigger: CCTGGCGCGCGGGGCGATGCTGATCCGGAAGGGGCAGCGGCTGCAGTGCAGCGCGCGCGTCCGCTCCTGGGCCCACGTCCGGCCTGGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS GCA 90 bp AGGGCAGCCCAGGCCGGACGTGGGCCCAGGAGCGGACGCGCGCGCTaGACTGCAGCCGCTGCCCCTTCCGGATCAGCATCGCCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: RAAQAGRGPRSGRAR*TAAAAPSGSASPRA
Trigger: CGCGCGGGGCGATGCTGATCCGGAAGGGGCAGCGGCTGCAGTGCAGCGCGCGCGTCCGCTCCTGGGCCCACGTCCGGCCTGGGCTGCCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS GCA 90 bp CGGACGTGGGCCCAGGAGCGGACGCGCGCGCTGCACTGCAGCCGCTaGCCCTTCCGGATCAGCATCGCCCCGCGCGCCAGGCGCCCAATG +
Preference number: 5 (lower is better)
Translates to: RTWAQERTRALHCSR*PFRISIAPRARRPM
Trigger: CATTGGGCGCCTGGCGCGCGGGGCGATGCTGATCCGGAAGGGGCAGCGGCTGCAGTGCAGCGCGCGCGTCCGCTCCTGGGCCCACGTCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS CCA 90 bp TGCAGCACCAGGATGACGTCCGCGCAGAGCGGGTCCTCCAGGAGGTaGGCGGGGCACTCCTCGCTGCTGGAGGGAGGGTCGGGCACCACG +
Preference number: 5 (lower is better)
Translates to: CSTRMTSAQSGSSRR*AGHSSLLEGGSGTT
Trigger: CGTGGTGCCCGACCCTCCCTCCAGCAGCGAGGAGTGCCCCGCCCACCTCCTGGAGGACCCGCTCTGCGCGGACGTCATCCTGGTGCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTGGCCAGGCCCCTGTGTaGCCCTCGGAGCCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGGQAPV*PSEPAG
Trigger: GCCAGCTGGCTCCGAGGGCAACACAGGGGCCTGGCC...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS TCA 90 bp AGATCTTGTGGGCAAAGATGCGCACCCGCTCCTGCAGCACCAGGATaGCGTCCGCGCAGAGCGGGTCCTCCAGGAGGTGGGCGGGGCACT +
Preference number: 5 (lower is better)
Translates to: RSCGQRCAPAPAAPG*RPRRAGPPGGGRGT
Trigger: AGTGCCCCGCCCACCTCCTGGAGGACCCGCTCTGCGCGGACGTCATCCTGGTGCTGCAGGAGCGGGTGCGCATCTTTGCCCACAAGATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS GCA 90 bp CTGAGCACGCTCATTTTAGTGAAATGTCAGGGGTCCCTCCGCGCCTaGAAGTTGGGACGACGCCGGCGCCGCCGCGCTGCTGCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: LSTLILVKCQGSLRA*KLGRRRRRRAAAGL
Trigger: GAGCCCAGCAGCAGCGCGGCGGCGCCGGCGTCGTCCCAACTTGCAGGCGCGGAGGGACCCCTGACATTTCACTAAAATGAGCGTGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000517528.1
CDS CCA 90 bp CCGGTAGGTACCCTGTTCCGTTGCCCCGTAAGATCCCGTCGCTGGTaGAAGCACGGAGGCCAGCAGGACCGGAGCCCCCAGCCTCATCCA +
Preference number: 5 (lower is better)
Translates to: PVGTLFRCPVRSRRW*KHGGQQDRSPQPHP
Trigger: TGGATGAGGCTGGGGGCTCCGGTCCTGCTGGCCTCCGTGCTTCCACCAGCGACGGGATCTTACGGGGCAACGGAACAGGGTACCTACCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CCA 90 bp TGCCCGGTAGGTACCCTGTTCCGTTGCCCCGTAAGATCCCGTCGCTaGTGGAAGCACGGAGGCCAGCAGGACCGGAGCCCCCAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: CPVGTLFRCPVRSRR*WKHGGQQDRSPQPH
Trigger: ATGAGGCTGGGGGCTCCGGTCCTGCTGGCCTCCGTGCTTCCACCAGCGACGGGATCTTACGGGGCAACGGAACAGGGTACCTACCGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTGGGATGCCCAGCTCCTaGGCCACCTCCCGACCCTTC +
Preference number: 5 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSGMPSS*ATSRPF
Trigger: GAAGGGTCGGGAGGTGGCCAAGGAGCTGGGCATCCC...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCGGTCGCCTAGCCCTGTaGACAGCCTCCAGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPGRLAL*TASRSA
Trigger: CGCTGACCTGGAGGCTGTCAACAGGGCTAGGCGACC...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS GCA 90 bp AGGAAGACAGCACACGACCCCTGCCCGGTAGGTACCCTGTTCCGTTaGCCCGTAAGATCCCGTCGCTGGTGGAAGCACGGAGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: RKTAHDPCPVGTLFR*PVRSRRWWKHGGQQ
Trigger: CTGCTGGCCTCCGTGCTTCCACCAGCGACGGGATCTTACGGGGCAACGGAACAGGGTACCTACCGGGCAGGGGTCGTGTGCTGTCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTTGGGTGAGGGTGGCATaGCAAGCGCGGGCACAGATG +
Preference number: 5 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSWVRVA*QARAQM
Trigger: CATCTGTGCCCGCGCTTGCAATGCCACCCTCACCCA...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTGGTCGCCTAGCCCTGTaGACAGCCTCCAGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGGRLAL*TASRSA
Trigger: CGCTGACCTGGAGGCTGTCAACAGGGCTAGGCGACC...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCCCCGTGTACAGGTACTaGAGGACAGCCCGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPPVYRY*RTARKG
Trigger: GCCCTTCCGGGCTGTCCTCAAGTACCTGTACACGGG...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
64% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGGCCAGGCCCCTGTGTaGCCCTCGGAGCCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: GKIWPTGAGPSRITSACWGQAPV*PSEPAG
Trigger: GCCAGCTGGCTCCGAGGGCAACACAGGGGCCTGGCC...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCCTCTGGGCTGCCGGGTaGCATCTGGTTCCGACAGCT +
Preference number: 5 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPLWAAG*HLVPTA
Trigger: AGCTGTCGGAACCAGATGCAACCCGGCAGCCCAGAG...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS GCA 90 bp TGCAGCAGAGGCCGCTGCACATTGCGGAGGTGGGACTTCCAGAACTaGAGGTGGCGGCGGGAGATGAGTGCAGCTCGGATGGCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: CSRGRCTLRRWDFQN*RWRREMSAARMALS
Trigger: TGACAACGCCATCCGAGCTGCACTCATCTCCCGCCGCCACCTGCAGTTCTGGAAGTCCCACCTCCGCAATGTGCAGCGGCCTCTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTAGAGGCCGCTGCACATaGCGGAGGTGGGACTTCCAG +
Preference number: 5 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGRGRCT*RRWDFQ
Trigger: CTGGAAGTCCCACCTCCGCAATGTGCAGCGGCCTCT...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCCGCTCCTCCAAGCAGTaGTCTCCCGTCCTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLRSSKQ*SPVLLW
Trigger: CCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCG...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCCGCTCCTCCAAGCAGTaGTCTCCCGTCCTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPRSSKQ*SPVLLW
Trigger: CCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCG...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp GGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACACCAGGGTACCCAGGTaGCTCAGCGCTTCAGGCACC +
Preference number: 5 (lower is better)
Translates to: GLFAPPSSCLPSCFGSGDTRVPR*LSASGT
Trigger: GGTGCCTGAAGCGCTGAGCAACCTGGGTACCCTGGT...GTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS GCA 90 bp CCATTAAACGGGACGCGAGATCACCAGTGGAGCTTGCCGAGGCCCTaGCCTGTCCCCTCTCCAGAGAGGGCAGCTCACTCATCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: PLNGTRDHQWSLPRP*PVPSPERAAHSSAL
Trigger: GAGAGCAGATGAGTGAGCTGCCCTCTCTGGAGAGGGGACAGGGCAGGGCCTCGGCAAGCTCCACTGGTGATCTCGCGTCCCGTTTAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523918.1
CDS CCA 90 bp AGAGGCCGCTGCACATTGCGGAGGTGGGACTTCCAGAACTGCAGGTaGCGGCGGGAGATGAGTGCAGCTCGGATGGCGTTGTCAAAGACG +
Preference number: 5 (lower is better)
Translates to: RGRCTLRRWDFQNCR*RREMSAARMALSKT
Trigger: CGTCTTTGACAACGCCATCCGAGCTGCACTCATCTCCCGCCGCCACCTGCAGTTCTGGAAGTCCCACCTCCGCAATGTGCAGCGGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCTCCGCGCCTGCAAGTaGGGACGACGCCGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: LTLGLSNPEIKCQGSSLLLRACK*GRRRRR
Trigger: GCGGCGCCGGCGTCGTCCCAACTTGCAGGCGCGGAG...GAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS-3UTR CAA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGAGAGGCCGCTGCACATaGCGGAGGTGGGACTTCCAG +
Preference number: 5 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLRGRCT*RRWDFQ
Trigger: CTGGAAGTCCCACCTCCGCAATGTGCAGCGGCCTCT...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCGAAATCAACAGGGGCTaGTGGGCGCTGATGGTGCCA +
Preference number: 5 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPEINRG*WALMVP
Trigger: TGGCACCATCAGCGCCCACAAGCCCCTGTTGATTTC...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCGCTCCTCCAAGCAGTaGTCTCCCGTCCTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGRSSKQ*SPVLLW
Trigger: CCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCG...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTTCCACGTCTGGCCTTTaGCAGCTGCACCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGSTSGL*QLHPRM
Trigger: CATCCTGGGGTGCAGCTGCAAAAGGCCAGACGTGGA...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS TCA 90 bp AGGATGGACTGTTCCAGAAGAGCCAACGCCGTTTGGGCTGCCGCTTaGGGTGGAGGTAGTCCTCCTTCTCACGCTCCTTCCGTGCCCGCT +
Preference number: 5 (lower is better)
Translates to: RMDCSRRANAVWAAA*GGGSPPSHAPSVPA
Trigger: AGCGGGCACGGAAGGAGCGTGAGAAGGAGGACTACCTCCACCTCAAGCGGCAGCCCAAACGGCGTTGGCTCTTCTGGAACAGTCCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS GCA 90 bp GCGGAGGTGGGACTTCCAGAACTGCAGGTGGCGGCGGGAGATGAGTaGAGCTCGGATGGCGTTGTCAAAGACGTCCTTGATGCCGAACTG +
Preference number: 5 (lower is better)
Translates to: AEVGLPELQVAAGDE*SSDGVVKDVLDAEL
Trigger: CAGTTCGGCATCAAGGACGTCTTTGACAACGCCATCCGAGCTGCACTCATCTCCCGCCGCCACCTGCAGTTCTGGAAGTCCCACCTCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCGCAAAGCGACGGTCTTaGTGGTGGTCTCCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLAKRRS*WWSPKV
Trigger: CACCTTTGGAGACCACCACAAAGACCGTCGCTTTGC...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCTTGTCAAAGACGTCCTaGATGCCGAACTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLLSKTS*MPNWAT
Trigger: GGTGGCCCAGTTCGGCATCAAGGACGTCTTTGACAA...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TGTGCCCCCACGCTGTCCATCTTCCCTAGAAGTGGAGGTGCTCCGGGTTCCCCCGCAGCTCGGATGGCGTaGTCAAAGACGTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: CAPTLSIFPRSGGAPGSPAARMA*SKTSLM
Trigger: CATCAAGGACGTCTTTGACAACGCCATCCGAGCTGC...GGGGGAACCCGGAGCACCTCCACTTCTAGGGAAGATGGACAGCGTGGGGGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTAAGAGCCAACGCCGTTaGGGCTGCCGCTTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSKSQRR*GCRLRW
Trigger: CCACCTCAAGCGGCAGCCCAAACGGCGTTGGCTCTT...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS TCA 90 bp CTTTGTGGTGGTCTCCAAAGGTGTCCCAGAGGCGCAGAGAGACGCTaGCATCATCTACCACGTCTCGGGAGCGTTCCAGCACCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: LCGGLQRCPRGAERR*HHLPRLGSVPAPPG
Trigger: GCCAGGAGGTGCTGGAACGCTCCCGAGACGTGGTAGATGATGTCAGCGTCTCTCTGCGCCTCTGGGACACCTTTGGAGACCACCACAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
ENST00000523918.1
ENST00000524077.5
CDS-3UTR CAA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAGTGATGGTGGTGGTGTaGATCAGAGTGGCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRVMVVV*IRVALV
Trigger: CACCAGGGCCACTCTGATCAACACCACCACCATCAC...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGTCTCCCGTCCTGCTTaGGGTCTGGGGACCTCTGCA +
Preference number: 5 (lower is better)
Translates to: GKIWPTGAGPSRITSACWVSRPA*GLGTSA
Trigger: TGCAGAGGTCCCCAGACCCAAAGCAGGACGGGAGAC...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGTCCACGTCTGGCCTTTaGCAGCTGCACCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: IWPTGAGPSRITSACWEWSTSGL*QLHPRM
Trigger: CATCCTGGGGTGCAGCTGCAAAAGGCCAGACGTGGA...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCAGACCAAACCCCTCTTaGCCGCCAGCCCGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: SRWAKARVWCHLSPETKPRPNPS*PPARAP
Trigger: AGGGGCCCGGGCTGGCGGCAAAGAGGGGTTTGGTCT...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS CCA 90 bp ATAGTAGGGGATGCCCAGCTCCTTGGCCACCTCCCGACCCTTCTCTaGGGGCAGGATTTCATTAGGTTTGATGGGCCTAGCCAAGGGTCG +
Preference number: 5 (lower is better)
Translates to: IVGDAQLLGHLPTLL*GQDFIRFDGPSQGS
Trigger: CGACCCTTGGCTAGGCCCATCAAACCTAATGAAATCCTGCCCCCAGAGAAGGGTCGGGAGGTGGCCAAGGAGCTGGGCATCCCCTACTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGCCCACCACAACGCACTaGATGGTCTCTACGTTTGGC +
Preference number: 5 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLPTTTH*MVSTFG
Trigger: GCCAAACGTAGAGACCATCAAGTGCGTTGTGGTGGG...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCTGGCACACACGATATaGGTCGATGGCCCATACTGT +
Preference number: 5 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGLAHTI*VDGPYC
Trigger: ACAGTATGGGCCATCGACCAATATCGTGTGTGCCAG...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GTTGCATCTGGTTCCGACAGCTCTCGGGGAATGGGCGGTGGGTCCCTGAAGTTGGCAAAGCGACGGTCTTaGTGGTGGTCTCCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: VASGSDSSRGMGGGSLKLAKRRS*WWSPKV
Trigger: CACCTTTGGAGACCACCACAAAGACCGTCGCTTTGC...CAACTTCAGGGACCCACCGCCCATTCCCCGAGAGCTGTCGGAACCAGATGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACAGGTCGCCTAGCCCTGTaGACAGCCTCCAGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTGRLAL*TASRSA
Trigger: CGCTGACCTGGAGGCTGTCAACAGGGCTAGGCGACC...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGGGGATGCCCAGCTCCTaGGCCACCTCCCGACCCTTC +
Preference number: 5 (lower is better)
Translates to: LELGSEGSISTLTSPVRVGMPSS*ATSRPF
Trigger: GAAGGGTCGGGAGGTGGCCAAGGAGCTGGGCATCCC...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTGGGATGCCCAGCTCCTaGGCCACCTCCCGACCCTTC +
Preference number: 5 (lower is better)
Translates to: SCTPGCRSLELGSEGSISGMPSS*ATSRPF
Trigger: GAAGGGTCGGGAGGTGGCCAAGGAGCTGGGCATCCC...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTGCATGCAGCTCTTGCTaGTGTAGGGAAACACCACCT +
Preference number: 5 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGACSSC*CRETPP
Trigger: AGGTGGTGTTTCCCTACACAAGCAAGAGCTGCATGC...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGGATGTAGAAGCCTaGAGTTGGGCTCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGQDVEA*SWALKA
Trigger: AGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTG...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTCGGGAGAAGTTTCTTGTaGCACCAAGAGGCACTGCTT +
Preference number: 5 (lower is better)
Translates to: GRALRSTGSPCTHSYFLLGRSFL*HQEALL
Trigger: AAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCC...GAGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CCA 90 bp GTGGCACTTGAGAGCCTTCCTCCCTCCATGGCCCTTAATGAGTTGTaGGGTGGGTACCTGTACCACGTTACCTGTCTCCCACCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: VALESLPPSMALNEL*GGYLYHVTCLPPRP
Trigger: AGGCCTAGGTGGGAGACAGGTAACGTGGTACAGGTACCCACCCCACAACTCATTAAGGGCCATGGAGGGAGGAAGGCTCTCAAGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518534.1
CDS-3UTR CAA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAGGGTACCACATGGTCTaGACATGGTGGAGGGAATTG +
Preference number: 5 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRGYHMV*TWWREL
Trigger: CAATTCCCTCCACCATGTCAAGACCATGTGGTACCC...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCAGAGGCCGCTGCACATaGCGGAGGTGGGACTTCCAG +
Preference number: 5 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPRGRCT*RRWDFQ
Trigger: CTGGAAGTCCCACCTCCGCAATGTGCAGCGGCCTCT...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTAGGTACCCTGTTCCGTaGCCCCGTAAGATCCCGTCG +
Preference number: 5 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSRYPVP*PRKIPS
Trigger: CGACGGGATCTTACGGGGCAACGGAACAGGGTACCT...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGGGAGGGCCCTGAGGAGCACGGGGTCGCCGTGCACTCATTCCTACTTCCTTCTTCCTGCCTGCTACCTTaGTTTCAGGTTAGCTCAATC +
Preference number: 5 (lower is better)
Translates to: GEGPEEHGVAVHSFLLPSSCLLP*FQVSSI
Trigger: GATTGAGCTAACCTGAAACAAAGGTAGCAGGCAGGA...AGAAGGAAGTAGGAATGAGTGCACGGCGACCCCGTGCTCCTCAGGGCCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTACCAGGGTACCCAGGTaGCTCAGCGCTTCAGGCACC +
Preference number: 5 (lower is better)
Translates to: AAAPQDVEALSWALKAQFTRVPR*LSASGT
Trigger: GGTGCCTGAAGCGCTGAGCAACCTGGGTACCCTGGT...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCCTCTGGGCTGCCGGGTaGCATCTGGTTCCGACAGCT +
Preference number: 5 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPLWAAG*HLVPTA
Trigger: AGCTGTCGGAACCAGATGCAACCCGGCAGCCCAGAG...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS CCA 90 bp GCCACCATCATGCGCAGATCAAAGACCTCGAGCAGCTCAGCAATGTaGGCAATGTGCATGAGGTCACGCTCGTTCTCATCTAGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: ATIMRRSKTSSSSAM*AMCMRSRSFSSSSP
Trigger: GGGGGAGCTAGATGAGAACGAGCGTGACCTCATGCACATTGCCCACATTGCTGAGCTGCTCGAGGTCTTTGATCTGCGCATGATGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CCA 90 bp AGTTCCAGGAACACAAGGACGTCCCCATCGATGTCCACCATCATCTaGGTCGCTTCCATCAGCCCGGTCACTGTGTACTGCTCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: SSRNTRTSPSMSTII*VASISPVTVYCSVR
Trigger: CCTCACAGAGCAGTACACAGTGACCGGGCTGATGGAAGCGACCCAGATGATGGTGGACATCGATGGGGACGTCCTTGTGTTCCTGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CCA 90 bp ACATCTGTCCAGAAGAAGCATCACAGGAGGACTGGTGAAAGAAGCTaGGAGAACAAGCCCCAAGGGGAGCCACGGAGCCTCCTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: TSVQKKHHRRTGERS*ENKPQGEPRSLLLN
Trigger: GTTCAGGAGGAGGCTCCGTGGCTCCCCTTGGGGCTTGTTCTCCCAGCTTCTTTCACCAGTCCTCCTGTGATGCTTCTTCTGGACAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519210.1
CDS-3UTR CAA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGCGGGGGCAGAAGTGCTaGATTTCTGGGTACCACATG +
Preference number: 5 (lower is better)
Translates to: GKIWPTGAGPSRITSACWRGQKC*ISGYHM
Trigger: CATGTGGTACCCAGAAATCAAGCACTTCTGCCCCCG...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGGCAGCTCGGATGGCGTaGTCAAAGACGTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGAARMA*SKTSLM
Trigger: CATCAAGGACGTCTTTGACAACGCCATCCGAGCTGC...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTGTGATGGTGGTGGTGTaGATCAGAGTGGCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSVMVVV*IRVALV
Trigger: CACCAGGGCCACTCTGATCAACACCACCACCATCAC...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACAAGGTACCCTGTTCCGTaGCCCCGTAAGATCCCGTCG +
Preference number: 5 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTRYPVP*PRKIPS
Trigger: CGACGGGATCTTACGGGGCAACGGAACAGGGTACCT...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGTGATGCGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTTCATTGTTGAGAATGTaGGCCACCATCATGCGCAGA +
Preference number: 5 (lower is better)
Translates to: GDAEEQRGEGGWGQQQQGSLLRM*ATIMRR
Trigger: TCTGCGCATGATGGTGGCCAACATTCTCAACAATGA...ACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCGCATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTCTGAAATCAACAGGGGCTaGTGGGCGCTGATGGTGCCA +
Preference number: 5 (lower is better)
Translates to: EGEVSCCTKRHCFQAWSSEINRG*WALMVP
Trigger: TGGCACCATCAGCGCCCACAAGCCCCTGTTGATTTC...AGAGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTGGCAGGCAGAGGCGGTaGGCTAGAATGATGAGCTTC +
Preference number: 5 (lower is better)
Translates to: VREKFLVAPRGTASRPGAGRQRR*ARMMSF
Trigger: GAAGCTCATCATTCTAGCCAACCGCCTCTGCCTGCC...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCGTCTCCCGTCCTGCTTaGGGTCTGGGGACCTCTGCA +
Preference number: 5 (lower is better)
Translates to: LTLGLSNPEIKCQGSSLLVSRPA*GLGTSA
Trigger: TGCAGAGGTCCCCAGACCCAAAGCAGGACGGGAGAC...GAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAGGGAGAAGTTTCTTGTaGCACCAAGAGGCACTGCTT +
Preference number: 5 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRGRSFL*HQEALL
Trigger: AAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCC...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACAGACCAAACCCCTCTTaGCCGCCAGCCCGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: AESFPERHWSRFCNLNLHRPNPS*PPARAP
Trigger: AGGGGCCCGGGCTGGCGGCAAAGAGGGGTTTGGTCT...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS TCA 90 bp GATGAAGGTCACATCTGTCCAGAAGAAGCATCACAGGAGGACTGGTaGAAGAAGCTGGGAGAACAAGCCCCAAGGGGAGCCACGGAGCCT +
Preference number: 5 (lower is better)
Translates to: DEGHICPEEASQEDW*KKLGEQAPRGATEP
Trigger: AGGCTCCGTGGCTCCCCTTGGGGCTTGTTCTCCCAGCTTCTTTCACCAGTCCTCCTGTGATGCTTCTTCTGGACAGATGTGACCTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519210.1
CDS GCA 90 bp ATGCGCAGATCAAAGACCTCGAGCAGCTCAGCAATGTGGGCAATGTaGATGAGGTCACGCTCGTTCTCATCTAGCTCCCCCGTGTACAGG +
Preference number: 5 (lower is better)
Translates to: MRRSKTSSSSAMWAM*MRSRSFSSSSPVYR
Trigger: CCTGTACACGGGGGAGCTAGATGAGAACGAGCGTGACCTCATGCACATTGCCCACATTGCTGAGCTGCTCGAGGTCTTTGATCTGCGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCGTGATGGTGGTGGTGTaGATCAGAGTGGCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: APQDVEALSWALKAQFLPVMVVV*IRVALV
Trigger: CACCAGGGCCACTCTGATCAACACCACCACCATCAC...GGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCAGGTACCCTGTTCCGTaGCCCCGTAAGATCCCGTCG +
Preference number: 5 (lower is better)
Translates to: LTLGLSNPEIKCQGSSLLRYPVP*PRKIPS
Trigger: CGACGGGATCTTACGGGGCAACGGAACAGGGTACCT...GAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTCCCGTGTACAGGTACTaGAGGACAGCCCGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSPVYRY*RTARKG
Trigger: GCCCTTCCGGGCTGTCCTCAAGTACCTGTACACGGG...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGCCCGTGTACAGGTACTaGAGGACAGCCCGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQPVYRY*RTARKG
Trigger: GCCCTTCCGGGCTGTCCTCAAGTACCTGTACACGGG...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGAATGAAGGCCTCATTGTaGAGAATGTTGGCCACCATC +
Preference number: 5 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRMKASL*RMLATI
Trigger: GATGGTGGCCAACATTCTCAACAATGAGGCCTTCAT...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp CGGAAGAGCAGAGGGGTGAAGGCGGATGGGGACAACAGCAGCAGGGTCAGAAGATTCATGAAGGCCTCATaGTTGAGAATGTTGGCCACC +
Preference number: 5 (lower is better)
Translates to: RKSRGVKADGDNSSRVRRFMKAS*LRMLAT
Trigger: GGTGGCCAACATTCTCAACAATGAGGCCTTCATGAA...TCTTCTGACCCTGCTGCTGTTGTCCCCATCCGCCTTCACCCCTCTGCTCTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAGAAATCAACAGGGGCTaGTGGGCGCTGATGGTGCCA +
Preference number: 5 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPEINRG*WALMVP
Trigger: TGGCACCATCAGCGCCCACAAGCCCCTGTTGATTTC...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCGGCAGGCAGAGGCGGTaGGCTAGAATGATGAGCTTC +
Preference number: 5 (lower is better)
Translates to: SRWAKARVWCHLSPETKPGRQRR*ARMMSF
Trigger: GAAGCTCATCATTCTAGCCAACCGCCTCTGCCTGCC...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp TTCTACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCGGCAGGCAGAGGCGGTaGGCTAGAATGATGAGCTTC +
Preference number: 5 (lower is better)
Translates to: FYPDFSSEGVSRLRVEMPGRQRR*ARMMSF
Trigger: GAAGCTCATCATTCTAGCCAACCGCCTCTGCCTGCC...GGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGAAGAGCCAACGCCGTTaGGGCTGCCGCTTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQKSQRR*GCRLRW
Trigger: CCACCTCAAGCGGCAGCCCAAACGGCGTTGGCTCTT...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS TCA 90 bp GCAGATCAAAGACCTCGAGCAGCTCAGCAATGTGGGCAATGTGCATaGGGTCACGCTCGTTCTCATCTAGCTCCCCCGTGTACAGGTACT +
Preference number: 5 (lower is better)
Translates to: ADQRPRAAQQCGQCA*GHARSHLAPPCTGT
Trigger: AGTACCTGTACACGGGGGAGCTAGATGAGAACGAGCGTGACCTCATGCACATTGCCCACATTGCTGAGCTGCTCGAGGTCTTTGATCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CCA 90 bp AACATGGCAGCCATCCAGTCACAGCTGGAAATCAACAGGGGCTTGTaGGCGCTGATGGTGCCATCATCCAGGATGAAGGTCACATCTGAG +
Preference number: 5 (lower is better)
Translates to: NMAAIQSQLEINRGL*ALMVPSSRMKVTSE
Trigger: CTCAGATGTGACCTTCATCCTGGATGATGGCACCATCAGCGCCCACAAGCCCCTGTTGATTTCCAGCTGTGACTGGATGGCTGCCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CCA 90 bp AACATGGCAGCCATCCAGTCACAGCTGGAAATCAACAGGGGCTTGTaGGCGCTGATGGTGCCATCATCCAGGATGAAGGTCACATCTGTC +
Preference number: 5 (lower is better)
Translates to: NMAAIQSQLEINRGL*ALMVPSSRMKVTSV
Trigger: GACAGATGTGACCTTCATCCTGGATGATGGCACCATCAGCGCCCACAAGCCCCTGTTGATTTCCAGCTGTGACTGGATGGCTGCCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519210.1
CDS-3UTR CAA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACACCCACCACAACGCACTaGATGGTCTCTACGTTTGGC +
Preference number: 5 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTPTTTH*MVSTFG
Trigger: GCCAAACGTAGAGACCATCAAGTGCGTTGTGGTGGG...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCGCAAAGCGACGGTCTTaGTGGTGGTCTCCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: SRWAKARVWCHLSPETKPAKRRS*WWSPKV
Trigger: CACCTTTGGAGACCACCACAAAGACCGTCGCTTTGC...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTCGGGGGCAGAAGTGCTaGATTTCTGGGTACCACATG +
Preference number: 5 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSRGQKC*ISGYHM
Trigger: CATGTGGTACCCAGAAATCAAGCACTTCTGCCCCCG...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCCGGGGGCAGAAGTGCTaGATTTCTGGGTACCACATG +
Preference number: 5 (lower is better)
Translates to: SRWAKARVWCHLSPETKPRGQKC*ISGYHM
Trigger: CATGTGGTACCCAGAAATCAAGCACTTCTGCCCCCG...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTTTGTCAAAGACGTCCTaGATGCCGAACTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTLSKTS*MPNWAT
Trigger: GGTGGCCCAGTTCGGCATCAAGGACGTCTTTGACAA...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTTTGTCAAAGACGTCCTaGATGCCGAACTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: AAAPQDVEALSWALKAQFLSKTS*MPNWAT
Trigger: GGTGGCCCAGTTCGGCATCAAGGACGTCTTTGACAA...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTCTGGGGACCTCTATGAAGGCCTCATTGTaGAGAATGTTGGCCACCATC +
Preference number: 5 (lower is better)
Translates to: SSLLQAVVSRPALGLGTSMKASL*RMLATI
Trigger: GATGGTGGCCAACATTCTCAACAATGAGGCCTTCAT...AGAGGTCCCCAGACCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGTTCATGAAGGCCTCATaGTTGAGAATGTTGGCCACC +
Preference number: 5 (lower is better)
Translates to: IWPTGAGPSRITSACWEWFMKAS*LRMLAT
Trigger: GGTGGCCAACATTCTCAACAATGAGGCCTTCATGAA...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTGCATGCAGCTCTTGCTaGTGTAGGGAAACACCACCT +
Preference number: 5 (lower is better)
Translates to: VREKFLVAPRGTASRPGAACSSC*CRETPP
Trigger: AGGTGGTGTTTCCCTACACAAGCAAGAGCTGCATGC...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTAAAGAGCCAACGCCGTTaGGGCTGCCGCTTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLKSQRR*GCRLRW
Trigger: CCACCTCAAGCGGCAGCCCAAACGGCGTTGGCTCTT...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS CCA 90 bp CTGCTTTGGGAATTTTCGTGGCACTTGAGAGCCTTCCTCCCTCCATaGCCCTTAATGAGTTGTGGGGTGGGTACCTGTACCACGTTACCT +
Preference number: 5 (lower is better)
Translates to: LLWEFSWHLRAFLPP*PLMSCGVGTCTTLP
Trigger: AGGTAACGTGGTACAGGTACCCACCCCACAACTCATTAAGGGCCATGGAGGGAGGAAGGCTCTCAAGTGCCACGAAAATTCCCAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518534.1
CDS-3UTR CAA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTCTGGCACACACGATATaGGTCGATGGCCCATACTGT +
Preference number: 5 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTLAHTI*VDGPYC
Trigger: ACAGTATGGGCCATCGACCAATATCGTGTGTGCCAG...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TCCAGATGGGCAAAAGCAAGAGTCTGGTGCCATTTAAGCCCCGAGACCAAACCCGGGTACCACATGGTCTaGACATGGTGGAGGGAATTG +
Preference number: 5 (lower is better)
Translates to: SRWAKARVWCHLSPETKPGYHMV*TWWREL
Trigger: CAATTCCCTCCACCATGTCAAGACCATGTGGTACCC...GGGTTTGGTCTCGGGGCTTAAATGGCACCAGACTCTTGCTTTTGCCCATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACAGGGTACCACATGGTCTaGACATGGTGGAGGGAATTG +
Preference number: 5 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTGYHMV*TWWREL
Trigger: CAATTCCCTCCACCATGTCAAGACCATGTGGTACCC...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGAGGATTTCATTAGGTTaGATGGGCCTAGCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: GKIWPTGAGPSRITSACWRISLG*MGLAKG
Trigger: ACCCTTGGCTAGGCCCATCAAACCTAATGAAATCCT...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GGAAAGATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGTCATTGTTGAGAATGTaGGCCACCATCATGCGCAGA +
Preference number: 5 (lower is better)
Translates to: GKIWPTGAGPSRITSACWSLLRM*ATIMRR
Trigger: TCTGCGCATGATGGTGGCCAACATTCTCAACAATGA...CCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATATCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp AAAATGCCAGGGCTCTTCGCTCCTCCAAGCAGTTGTCTCCCGTCCTGCTTTGGGTGTAGAAGCCTTGAGTaGGGCTCTGAAGGCTCAATT +
Preference number: 5 (lower is better)
Translates to: KMPGLFAPPSSCLPSCFGCRSLE*GSEGSI
Trigger: AATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACA...CCCAAAGCAGGACGGGAGACAACTGCTTGGAGGAGCGAAGAGCCCTGGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TCTCTGAGGGTAAGGAAGGGAGCCTGCAGTCTCCAGATGGGCAAAAGCAAGAGTCAGGATGTAGAAGCCTaGAGTTGGGCTCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: SLRVRKGACSLQMGKSKSQDVEA*SWALKA
Trigger: AGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTG...ACTCTTGCTTTTGCCCATCTGGAGACTGCAGGCTCCCTTCCTTACCCTCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTGCAGCTCGGATGGCGTaGTCAAAGACGTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSAARMA*SKTSLM
Trigger: CATCAAGGACGTCTTTGACAACGCCATCCGAGCTGC...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp AGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTCTGCATGCAGCTCTTGCTaGTGTAGGGAAACACCACCT +
Preference number: 5 (lower is better)
Translates to: SCTPGCRSLELGSEGSISACSSC*CRETPP
Trigger: AGGTGGTGTTTCCCTACACAAGCAAGAGCTGCATGC...AGAAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTTGTAGAAGCCTTGAGTaGGGCTCTGAAGGCTCAATT +
Preference number: 5 (lower is better)
Translates to: VREKFLVAPRGTASRPGACRSLE*GSEGSI
Trigger: AATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACA...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAGGATGTAGAAGCCTaGAGTTGGGCTCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: LTLGLSNPEIKCQGSSLLQDVEA*SWALKA
Trigger: AGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTG...GAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACAGGGAGAAGTTTCTTGTaGCACCAAGAGGCACTGCTT +
Preference number: 5 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTGRSFL*HQEALL
Trigger: AAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCC...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTGCTTCCAGGCCTGGAGCTTCCCAGCTGCTTCCTTaGGTTACCATCTCCAAATCT +
Preference number: 5 (lower is better)
Translates to: VREKFLVAPRGTASRPGASQLLP*VTISKS
Trigger: AGATTTGGAGATGGTAACCAAAGGAAGCAGCTGGGA...AGCTCCAGGCCTGGAAGCAGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTGCCTTTTCTCCAGGCTaGCATCGCTCTGTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSAFSPG*HRSVFP
Trigger: AGGGAACACAGAGCGATGCAAGCCTGGAGAAAAGGC...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR CAA 90 bp CTTGAGTTGGGCTCTGAAGGCTCAATTTCTACCCTGACTTCTCCAGTGAGGGTGTGCGCGTGCATATTCTaGTTTACTGCCACCTCGCCT +
Preference number: 5 (lower is better)
Translates to: LELGSEGSISTLTSPVRVCACIF*FTATSP
Trigger: AGGCGAGGTGGCAGTAAACAAGAATATGCACGCGCA...CACCCTCACTGGAGAAGTCAGGGTAGAAATTGAGCCTTCAGAGCCCAACTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519685.5
CDS-3UTR CAA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACCCCACCACAACGCACTaGATGGTCTCTACGTTTGGC +
Preference number: 5 (lower is better)
Translates to: AESFPERHWSRFCNLNLHPTTTH*MVSTFG
Trigger: GCCAAACGTAGAGACCATCAAGTGCGTTGTGGTGGG...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGCTGGCACACACGATATaGGTCGATGGCCCATACTGT +
Preference number: 5 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQLAHTI*VDGPYC
Trigger: ACAGTATGGGCCATCGACCAATATCGTGTGTGCCAG...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTAGGATTTCATTAGGTTaGATGGGCCTAGCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTRISLG*MGLAKG
Trigger: ACCCTTGGCTAGGCCCATCAAACCTAATGAAATCCT...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTTCGCTCCTCCAAGGATTTCATTAGGTTaGATGGGCCTAGCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: DSRALKPRDKMPGLFAPPRISLG*MGLAKG
Trigger: ACCCTTGGCTAGGCCCATCAAACCTAATGAAATCCT...TGGAGGAGCGAAGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp TACCCTGACTTCTCCAGTGAGGGTGTGAGTAGGCTTCGTGTGGAAATGCCCACAATGAAGGCCTCATTGTaGAGAATGTTGGCCACCATC +
Preference number: 5 (lower is better)
Translates to: YPDFSSEGVSRLRVEMPTMKASL*RMLATI
Trigger: GATGGTGGCCAACATTCTCAACAATGAGGCCTTCAT...TGTGGGCATTTCCACACGAAGCCTACTCACACCCTCACTGGAGAAGTCAGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTTTCATGAAGGCCTCATaGTTGAGAATGTTGGCCACC +
Preference number: 5 (lower is better)
Translates to: AAAPQDVEALSWALKAQFFMKAS*LRMLAT
Trigger: GGTGGCCAACATTCTCAACAATGAGGCCTTCATGAA...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGTGGGAGGCTTTCCCTTaGACTCTAGGGCTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQWEAFP*TLGLSN
Trigger: GTTTGAGAGCCCTAGAGTCAAAGGGAAAGCCTCCCA...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GCAGCTGCACCCCAGGATGTAGAAGCCTTGAGTTGGGCTCTGAAGGCTCAATTTTCCCAGCTGCTTCCTTaGGTTACCATCTCCAAATCT +
Preference number: 5 (lower is better)
Translates to: AAAPQDVEALSWALKAQFSQLLP*VTISKS
Trigger: AGATTTGGAGATGGTAACCAAAGGAAGCAGCTGGGA...AAATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACATCCTGGGGTGCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp ATATGGCCAACAGGGGCAGGACCCTCGAGGATCACTTCTGCTTGCTGGGAGTGGCGTTTCGGTTTCAGTTaGGTTGTCATTGGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: IWPTGAGPSRITSACWEWRFGFS*VVIGFC
Trigger: ACAAAAACCAATGACAACCAAACTGAAACCGAAACG...CCACTCCCAGCAAGCAGAAGTGATCCTCGAGGGTCCTGCCCCTGTTGGCCATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS TCA 90 bp CCATTAAACGGGACACCACTACATGTGACGGGGTGGCTTCTAGCGTaGGGAACACATCTCTTCCTGCTGAGCACGCTCATTTTAGTGAAA +
Preference number: 5 (lower is better)
Translates to: PLNGTPLHVTGWLLA*GTHLFLLSTLILVK
Trigger: TTTCACTAAAATGAGCGTGCTCAGCAGGAAGAGATGTGTTCCTCACGCTAGAAGCCACCCCGTCACATGTAGTGGTGTCCCGTTTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000517528.1
CDS-3UTR CAA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTATGGGAGGCTTTCCCTTaGACTCTAGGGCTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLWEAFP*TLGLSN
Trigger: GTTTGAGAGCCCTAGAGTCAAAGGGAAAGCCTCCCA...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGTGTAGAAGCCTTGAGTaGGGCTCTGAAGGCTCAATT +
Preference number: 5 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQCRSLE*GSEGSI
Trigger: AATTGAGCCTTCAGAGCCCAACTCAAGGCTTCTACA...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp AAACAAATGCAACACTCAAGTCCGTCGGTGGAAAGATATGGCCAACAGGGGCAGTCCTGCCTGCTACCTTaGTTTCAGGTTAGCTCAATC +
Preference number: 5 (lower is better)
Translates to: KQMQHSSPSVERYGQQGQSCLLP*FQVSSI
Trigger: GATTGAGCTAACCTGAAACAAAGGTAGCAGGCAGGA...CTGCCCCTGTTGGCCATATCTTTCCACCGACGGACTTGAGTGTTGCATTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp GCCGAGTCCTTTCCTGAAAGGCATTGGAGTCGATTCTGCAACCTAAATCTTCACTCATTGTTGAGAATGTaGGCCACCATCATGCGCAGA +
Preference number: 5 (lower is better)
Translates to: AESFPERHWSRFCNLNLHSLLRM*ATIMRR
Trigger: TCTGCGCATGATGGTGGCCAACATTCTCAACAATGA...GTGAAGATTTAGGTTGCAGAATCGACTCCAATGCCTTTCAGGAAAGGACTCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp GAGTCGATTCTGCAACCTAAATCTTCACCTCCTCATCATGGGGGCCTCTGTTTATCCCAGCTGCTTCCTTaGGTTACCATCTCCAAATCT +
Preference number: 5 (lower is better)
Translates to: ESILQPKSSPPHHGGLCLSQLLP*VTISKS
Trigger: AGATTTGGAGATGGTAACCAAAGGAAGCAGCTGGGA...TAAACAGAGGCCCCCATGATGAGGAGGTGAAGATTTAGGTTGCAGAATCGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000522948.5
CDS-3UTR CAA 90 bp CTGAGGGTAAAGGAGGGGGTGAGGGAGAAGTTTCTTGTTGCACCAAGAGGCACTCGTTTCGGTTTCAGTTaGGTTGTCATTGGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: LRVKEGVREKFLVAPRGTRFGFS*VVIGFC
Trigger: ACAAAAACCAATGACAACCAAACTGAAACCGAAACG...AGTGCCTCTTGGTGCAACAAGAAACTTCTCCCTCACCCCCTCCTTTACCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS-3UTR CAA 90 bp GCTTTCCCTTTGACTCTAGGGCTCTCAAACCCAGAGATAAAATGCCAGGGCTCTCGTTTCGGTTTCAGTTaGGTTGTCATTGGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: AFPLTLGLSNPEIKCQGSRFGFS*VVIGFC
Trigger: ACAAAAACCAATGACAACCAAACTGAAACCGAAACG...AGAGCCCTGGCATTTTATCTCTGGGTTTGAGAGCCCTAGAGTCAAAGGGAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS GCA 72 bp GCCGCCGCTACGCGCCCGGGCCCGCGGCGAAGGCGCTaGCGCGAAGACGCCTGGCGCTGCAGTCCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: AAATRPGPRRRR*REDAWRCSPRY
Trigger: GTACCTGGGACTGCAGCGCCAGGCGTCTTCGCGGCAGCGCCTTCGCCGCGGGCCCGGGCGCGTAGCGGCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS GCA 72 bp GCCCAGGAGCGGACGCGCGCGCTGCACTGCAGCCGCTaGCCCTTCCGGATCAGCATCGCCCCGCGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: AQERTRALHCSR*PFRISIAPRAR
Trigger: CCTGGCGCGCGGGGCGATGCTGATCCGGAAGGGGCAGCGGCTGCAGTGCAGCGCGCGCGTCCGCTCCTGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS GCA 72 bp CGGACGTGGGCCCAGGAGCGGACGCGCGCGCTGCACTaGAGCCGCTGCCCCTTCCGGATCAGCATCGCCCCG +
Preference number: 6 (lower is better)
Translates to: RTWAQERTRALH*SRCPFRISIAP
Trigger: CGGGGCGATGCTGATCCGGAAGGGGCAGCGGCTGCAGTGCAGCGCGCGCGTCCGCTCCTGGGCCCACGTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS CCA 72 bp CCGGGCCCGCGGCGAAGGCGCTGCCGCGAAGACGCCTaGCGCTGCAGTCCCAGGTACCGCTCGCGACCTCCT +
Preference number: 6 (lower is better)
Translates to: PGPRRRRCREDA*RCSPRYRSRPP
Trigger: AGGAGGTCGCGAGCGGTACCTGGGACTGCAGCGCCAGGCGTCTTCGCGGCAGCGCCTTCGCCGCGGGCCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS GCA 72 bp CAGGCCGGACGTGGGCCCAGGAGCGGACGCGCGCGCTaGACTGCAGCCGCTGCCCCTTCCGGATCAGCATCG +
Preference number: 6 (lower is better)
Translates to: QAGRGPRSGRAR*TAAAAPSGSAS
Trigger: CGATGCTGATCCGGAAGGGGCAGCGGCTGCAGTGCAGCGCGCGCGTCCGCTCCTGGGCCCACGTCCGGCCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251822.7
CDS CCA 72 bp AGGATGACGTCCGCGCAGAGCGGGTCCTCCAGGAGGTaGGCGGGGCACTCCTCGCTGCTGGAGGGAGGGTCG +
Preference number: 6 (lower is better)
Translates to: RMTSAQSGSSRR*AGHSSLLEGGS
Trigger: CGACCCTCCCTCCAGCAGCGAGGAGTGCCCCGCCCACCTCCTGGAGGACCCGCTCTGCGCGGACGTCATCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS TCA 72 bp GGGCAAAGATGCGCACCCGCTCCTGCAGCACCAGGATaGCGTCCGCGCAGAGCGGGTCCTCCAGGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: GQRCAPAPAAPG*RPRRAGPPGGG
Trigger: CCCACCTCCTGGAGGACCCGCTCTGCGCGGACGTCATCCTGGTGCTGCAGGAGCGGGTGCGCATCTTTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CCA 72 bp ACCCTGTTCCGTTGCCCCGTAAGATCCCGTCGCTGGTaGAAGCACGGAGGCCAGCAGGACCGGAGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: TLFRCPVRSRRW*KHGGQQDRSPQ
Trigger: CTGGGGGCTCCGGTCCTGCTGGCCTCCGTGCTTCCACCAGCGACGGGATCTTACGGGGCAACGGAACAGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CCA 72 bp GGTACCCTGTTCCGTTGCCCCGTAAGATCCCGTCGCTaGTGGAAGCACGGAGGCCAGCAGGACCGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: GTLFRCPVRSRR*WKHGGQQDRSP
Trigger: GGGGCTCCGGTCCTGCTGGCCTCCGTGCTTCCACCAGCGACGGGATCTTACGGGGCAACGGAACAGGGTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS GCA 72 bp GGGACGCGAGATCACCAGTGGAGCTTGCCGAGGCCCTaGCCTGTCCCCTCTCCAGAGAGGGCAGCTCACTCA +
Preference number: 6 (lower is better)
Translates to: GTRDHQWSLPRP*PVPSPERAAHS
Trigger: TGAGTGAGCTGCCCTCTCTGGAGAGGGGACAGGGCAGGGCCTCGGCAAGCTCCACTGGTGATCTCGCGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523918.1
CDS CCA 72 bp GGTGCCTGCAGCAGAGGCCGCTGCACATTGCGGAGGTaGGACTTCCAGAACTGCAGGTGGCGGCGGGAGATG +
Preference number: 6 (lower is better)
Translates to: GACSRGRCTLRR*DFQNCRWRREM
Trigger: CATCTCCCGCCGCCACCTGCAGTTCTGGAAGTCCCACCTCCGCAATGTGCAGCGGCCTCTGCTGCAGGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS GCA 72 bp GGCCGCTGCACATTGCGGAGGTGGGACTTCCAGAACTaGAGGTGGCGGCGGGAGATGAGTGCAGCTCGGATG +
Preference number: 6 (lower is better)
Translates to: GRCTLRRWDFQN*RWRREMSAARM
Trigger: CATCCGAGCTGCACTCATCTCCCGCCGCCACCTGCAGTTCTGGAAGTCCCACCTCCGCAATGTGCAGCGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS GCA 72 bp GCACACGACCCCTGCCCGGTAGGTACCCTGTTCCGTTaGCCCGTAAGATCCCGTCGCTGGTGGAAGCACGGA +
Preference number: 6 (lower is better)
Translates to: AHDPCPVGTLFR*PVRSRRWWKHG
Trigger: TCCGTGCTTCCACCAGCGACGGGATCTTACGGGGCAACGGAACAGGGTACCTACCGGGCAGGGGTCGTGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CAA 72 bp AGCACACGACCCCTGCCCGGTAGGTACCCTGTTCCGTaGCCCCGTAAGATCCCGTCGCTGGTGGAAGCACGG +
Preference number: 6 (lower is better)
Translates to: STRPLPGRYPVP*PRKIPSLVEAR
Trigger: CCGTGCTTCCACCAGCGACGGGATCTTACGGGGCAACGGAACAGGGTACCTACCGGGCAGGGGTCGTGTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CAA 90 bp GAGCAGGAAGTCTCGCCCATGGTGGTGGTGGTGATGGTGGTGGTGTaGATCAGAGTGGCCCTGGTGGTCCTCTGGGTGGGTGCCCCCTGG +
Preference number: 6 (lower is better)
Translates to: EQEVSPMVVVVMVVV*IRVALVVLWVGAPW
Trigger: CCAGGGGGCACCCACCCAGAGGACCACCAGGGCCACTCTGATCAACACCACCACCATCACCACCACCACCATGGGCGAGACTTCCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CAA 90 bp CAGGAAGACAGCACACGACCCCTGCCCGGTAGGTACCCTGTTCCGTaGCCCCGTAAGATCCCGTCGCTGGTGGAAGCACGGAGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: QEDSTRPLPGRYPVP*PRKIPSLVEARRPA
Trigger: TGCTGGCCTCCGTGCTTCCACCAGCGACGGGATCTTACGGGGCAACGGAACAGGGTACCTACCGGGCAGGGGTCGTGTGCTGTCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CCA 72 bp CCCCAGCCTCATCCACGCTCTCGCACACGTCAAAGCTaGCTGCTCGGAGCAGGAAGTCTCGCCCATGGTGGT +
Preference number: 6 (lower is better)
Translates to: PQPHPRSRTRQS*LLGAGSLAHGG
Trigger: ACCACCATGGGCGAGACTTCCTGCTCCGAGCAGCCAGCTTTGACGTGTGCGAGAGCGTGGATGAGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CAA 90 bp CAGAACTGCAGGTGGCGGCGGGAGATGAGTGCAGCTCGGATGGCGTaGTCAAAGACGTCCTTGATGCCGAACTGGGCCACCACGCTGGTC +
Preference number: 6 (lower is better)
Translates to: QNCRWRREMSAARMA*SKTSLMPNWATTLV
Trigger: GACCAGCGTGGTGGCCCAGTTCGGCATCAAGGACGTCTTTGACAACGCCATCCGAGCTGCACTCATCTCCCGCCGCCACCTGCAGTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS TCA 72 bp GCTCGTTCTCATCTAGCTCCCCCGTGTACAGGTACTTaGGGACAGCCCGGAAGGGCCCCGGCTGGATGGAAC +
Preference number: 6 (lower is better)
Translates to: ARSHLAPPCTGT*GQPGRAPAGWN
Trigger: GTTCCATCCAGCCGGGGCCCTTCCGGGCTGTCCTCAAGTACCTGTACACGGGGGAGCTAGATGAGAACGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CCA 72 bp TGCACATTGCGGAGGTGGGACTTCCAGAACTGCAGGTaGCGGCGGGAGATGAGTGCAGCTCGGATGGCGTTG +
Preference number: 6 (lower is better)
Translates to: CTLRRWDFQNCR*RREMSAARMAL
Trigger: CAACGCCATCCGAGCTGCACTCATCTCCCGCCGCCACCTGCAGTTCTGGAAGTCCCACCTCCGCAATGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CCA 72 bp CATCCTGTCCCACCCCTAGAGGGCTCCCGTGAGCTCTaGAGACACCAAGCTATGCCTCAGGAAGCCCCCAAG +
Preference number: 6 (lower is better)
Translates to: HPVPPLEGSREL*RHQAMPQEAPK
Trigger: CTTGGGGGCTTCCTGAGGCATAGCTTGGTGTCTCCAGAGCTCACGGGAGCCCTCTAGGGGTGGGACAGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517528.1
CDS CAA 72 bp AGGTGGCGGCGGGAGATGAGTGCAGCTCGGATGGCGTaGTCAAAGACGTCCTTGATGCCGAACTGGGCCACC +
Preference number: 6 (lower is better)
Translates to: RWRREMSAARMA*SKTSLMPNWAT
Trigger: GGTGGCCCAGTTCGGCATCAAGGACGTCTTTGACAACGCCATCCGAGCTGCACTCATCTCCCGCCGCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CAA 72 bp CGCTCGTTCTCATCTAGCTCCCCCGTGTACAGGTACTaGAGGACAGCCCGGAAGGGCCCCGGCTGGATGGAA +
Preference number: 6 (lower is better)
Translates to: RSFSSSSPVYRY*RTARKGPGWME
Trigger: TTCCATCCAGCCGGGGCCCTTCCGGGCTGTCCTCAAGTACCTGTACACGGGGGAGCTAGATGAGAACGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS TCA 72 bp GGTGGGACTTCCAGAACTGCAGGTGGCGGCGGGAGATaGGTGCAGCTCGGATGGCGTTGTCAAAGACGTCCT +
Preference number: 6 (lower is better)
Translates to: GGTSRTAGGGGR*VQLGWRCQRRP
Trigger: AGGACGTCTTTGACAACGCCATCCGAGCTGCACTCATCTCCCGCCGCCACCTGCAGTTCTGGAAGTCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CAA 90 bp ATGAGGTCACGCTCGTTCTCATCTAGCTCCCCCGTGTACAGGTACTaGAGGACAGCCCGGAAGGGCCCCGGCTGGATGGAACTGTCCATC +
Preference number: 6 (lower is better)
Translates to: MRSRSFSSSSPVYRY*RTARKGPGWMELSI
Trigger: GATGGACAGTTCCATCCAGCCGGGGCCCTTCCGGGCTGTCCTCAAGTACCTGTACACGGGGGAGCTAGATGAGAACGAGCGTGACCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS TCA 72 bp GGTCTCCAAAGGTGTCCCAGAGGCGCAGAGAGACGCTaGCATCATCTACCACGTCTCGGGAGCGTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: GLQRCPRGAERR*HHLPRLGSVPA
Trigger: TGCTGGAACGCTCCCGAGACGTGGTAGATGATGTCAGCGTCTCTCTGCGCCTCTGGGACACCTTTGGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
ENST00000523918.1
ENST00000524077.5
CDS TCA 72 bp TGTTCCAGAAGAGCCAACGCCGTTTGGGCTGCCGCTTaGGGTGGAGGTAGTCCTCCTTCTCACGCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: CSRRANAVWAAA*GGGSPPSHAPS
Trigger: GGAAGGAGCGTGAGAAGGAGGACTACCTCCACCTCAAGCGGCAGCCCAAACGGCGTTGGCTCTTCTGGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS GCA 72 bp TGTAGAGGTATTCCAGCACGGCCCGCATGCAGCTCTTaGTTGTGTAGGGAAACACCACCTCCCGGGTGGAGC +
Preference number: 6 (lower is better)
Translates to: CRGIPARPACSS*LCRETPPPGWS
Trigger: GCTCCACCCGGGAGGTGGTGTTTCCCTACACAAGCAAGAGCTGCATGCGGGCCGTGCTGGAATACCTCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251822.7
ENST00000519210.1
ENST00000519685.5
ENST00000522948.5
CDS GCA 72 bp GGAACAGAACAGGCTGCCACCTCGCCTCTGGGGCTCTaGTGGCCTGTCACTATTCCCTGTCCTGAAGTAGTG +
Preference number: 6 (lower is better)
Translates to: GTEQAATSPLGL*WPVTIPCPEVV
Trigger: CACTACTTCAGGACAGGGAATAGTGACAGGCCAGCAGAGCCCCAGAGGCGAGGTGGCAGCCTGTTCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524077.5
CDS CAA 72 bp GAGAAGGTGCCTTTTGCCAAGCACTCCTTAACCCGGTaGGTCCGGCGGACGTGGAAGGCCTTGGTGATCTCC +
Preference number: 6 (lower is better)
Translates to: EKVPFAKHSLTR*VRRTWKALVIS
Trigger: GGAGATCACCAAGGCCTTCCACGTCCGCCGGACCAACCGGGTTAAGGAGTGCTTGGCAAAAGGCACCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CAA 72 bp AGAGGTATTCCAGCACGGCCCGCATGCAGCTCTTGCTaGTGTAGGGAAACACCACCTCCCGGGTGGAGCTCT +
Preference number: 6 (lower is better)
Translates to: RGIPARPACSSC*CRETPPPGWSS
Trigger: AGAGCTCCACCCGGGAGGTGGTGTTTCCCTACACAAGCAAGAGCTGCATGCGGGCCGTGCTGGAATACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251822.7
ENST00000519210.1
ENST00000519685.5
ENST00000522948.5
CDS CAA 90 bp GTGTACTGCTCTGTGAGGGCAACCAGGTGTGGCAGGCAGAGGCGGTaGGCTAGAATGATGAGCTTCATGTCATCCAGGTCGGGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: VYCSVRATRCGRQRR*ARMMSFMSSRSGLE
Trigger: CTCCAGCCCCGACCTGGATGACATGAAGCTCATCATTCTAGCCAACCGCCTCTGCCTGCCACACCTGGTTGCCCTCACAGAGCAGTACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS GCA 72 bp GGACTTCCAGAACTGCAGGTGGCGGCGGGAGATGAGTaGAGCTCGGATGGCGTTGTCAAAGACGTCCTTGAT +
Preference number: 6 (lower is better)
Translates to: GLPELQVAAGDE*SSDGVVKDVLD
Trigger: ATCAAGGACGTCTTTGACAACGCCATCCGAGCTGCACTCATCTCCCGCCGCCACCTGCAGTTCTGGAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS GCA 72 bp ACATGCCGGTGTAGAGGTATTCCAGCACGGCCCGCATaGAGCTCTTGCTTGTGTAGGGAAACACCACCTCCC +
Preference number: 6 (lower is better)
Translates to: TCRCRGIPARPA*SSCLCRETPPP
Trigger: GGGAGGTGGTGTTTCCCTACACAAGCAAGAGCTGCATGCGGGCCGTGCTGGAATACCTCTACACCGGCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251822.7
ENST00000519210.1
ENST00000519685.5
ENST00000522948.5
CDS CAA 90 bp TTCGTGGCACTTGAGAGCCTTCCTCCCTCCATGGCCCTTAATGAGTaGTGGGGTGGGTACCTGTACCACGTTACCTGTCTCCCACCTAGG +
Preference number: 6 (lower is better)
Translates to: FVALESLPPSMALNE*WGGYLYHVTCLPPR
Trigger: CCTAGGTGGGAGACAGGTAACGTGGTACAGGTACCCACCCCACAACTCATTAAGGGCCATGGAGGGAGGAAGGCTCTCAAGTGCCACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518534.1
CDS TCA 72 bp AGACCTCGAGCAGCTCAGCAATGTGGGCAATGTGCATaGGGTCACGCTCGTTCTCATCTAGCTCCCCCGTGT +
Preference number: 6 (lower is better)
Translates to: RPRAAQQCGQCA*GHARSHLAPPC
Trigger: ACACGGGGGAGCTAGATGAGAACGAGCGTGACCTCATGCACATTGCCCACATTGCTGAGCTGCTCGAGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CCA 72 bp GCCATCCAGTCACAGCTGGAAATCAACAGGGGCTTGTaGGCGCTGATGGTGCCATCATCCAGGATGAAGGTC +
Preference number: 6 (lower is better)
Translates to: AIQSQLEINRGL*ALMVPSSRMKV
Trigger: GACCTTCATCCTGGATGATGGCACCATCAGCGCCCACAAGCCCCTGTTGATTTCCAGCTGTGACTGGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251822.7
ENST00000519210.1
ENST00000519685.5
ENST00000522948.5
CDS CCA 72 bp AACACAAGGACGTCCCCATCGATGTCCACCATCATCTaGGTCGCTTCCATCAGCCCGGTCACTGTGTACTGC +
Preference number: 6 (lower is better)
Translates to: NTRTSPSMSTII*VASISPVTVYC
Trigger: GCAGTACACAGTGACCGGGCTGATGGAAGCGACCCAGATGATGGTGGACATCGATGGGGACGTCCTTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CCA 72 bp ACACAACCAGCCAGAGACACTTCCCTGGGGCAGACTTaGCTTAAACCTCTCTCCAGGGGCTCCTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: TQPARDTSLGQT*LKPLSRGSFLF
Trigger: GAAGAGGAAGGAGCCCCTGGAGAGAGGTTTAAGCCAAGTCTGCCCCAGGGAAGTGTCTCTGGCTGGTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517528.1
CDS CCA 72 bp GAGAGCCTTCCTCCCTCCATGGCCCTTAATGAGTTGTaGGGTGGGTACCTGTACCACGTTACCTGTCTCCCA +
Preference number: 6 (lower is better)
Translates to: ESLPPSMALNEL*GGYLYHVTCLP
Trigger: TGGGAGACAGGTAACGTGGTACAGGTACCCACCCCACAACTCATTAAGGGCCATGGAGGGAGGAAGGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518534.1
CDS CAA 72 bp GCAGCCATCCAGTCACAGCTGGAAATCAACAGGGGCTaGTGGGCGCTGATGGTGCCATCATCCAGGATGAAG +
Preference number: 6 (lower is better)
Translates to: AAIQSQLEINRG*WALMVPSSRMK
Trigger: CTTCATCCTGGATGATGGCACCATCAGCGCCCACAAGCCCCTGTTGATTTCCAGCTGTGACTGGATGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251822.7
ENST00000519210.1
ENST00000519685.5
ENST00000522948.5
CDS CAA 72 bp TCTGTGAGGGCAACCAGGTGTGGCAGGCAGAGGCGGTaGGCTAGAATGATGAGCTTCATGTCATCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: SVRATRCGRQRR*ARMMSFMSSRS
Trigger: CGACCTGGATGACATGAAGCTCATCATTCTAGCCAACCGCCTCTGCCTGCCACACCTGGTTGCCCTCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS TCA 72 bp GGGACACCACTACATGTGACGGGGTGGCTTCTAGCGTaGGGAACACATCTCTTCCTGCTGAGCACGCTCATT +
Preference number: 6 (lower is better)
Translates to: GTPLHVTGWLLA*GTHLFLLSTLI
Trigger: AATGAGCGTGCTCAGCAGGAAGAGATGTGTTCCTCACGCTAGAAGCCACCCCGTCACATGTAGTGGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251822.7
ENST00000517528.1
CDS GCA 72 bp TCAAAGACCTCGAGCAGCTCAGCAATGTGGGCAATGTaGATGAGGTCACGCTCGTTCTCATCTAGCTCCCCC +
Preference number: 6 (lower is better)
Translates to: SKTSSSSAMWAM*MRSRSFSSSSP
Trigger: GGGGGAGCTAGATGAGAACGAGCGTGACCTCATGCACATTGCCCACATTGCTGAGCTGCTCGAGGTCTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CAA 72 bp CCCACCAAGATGACAGGTGCTCGGGGGCAGAAGTGCTaGATTTCTGGGTACCACATGGTCTTGACATGGTGG +
Preference number: 6 (lower is better)
Translates to: PTKMTGARGQKC*ISGYHMVLTWW
Trigger: CCACCATGTCAAGACCATGTGGTACCCAGAAATCAAGCACTTCTGCCCCCGAGCACCTGTCATCTTGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
ENST00000523918.1
ENST00000524077.5
CDS CAA 90 bp AACTGGCAGCCCACCAAGATGACAGGTGCTCGGGGGCAGAAGTGCTaGATTTCTGGGTACCACATGGTCTTGACATGGTGGAGGGAATTG +
Preference number: 6 (lower is better)
Translates to: NWQPTKMTGARGQKC*ISGYHMVLTWWREL
Trigger: CAATTCCCTCCACCATGTCAAGACCATGTGGTACCCAGAAATCAAGCACTTCTGCCCCCGAGCACCTGTCATCTTGGTGGGCTGCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
ENST00000523918.1
ENST00000524077.5
CDS CAA 90 bp CCAAACATGGCAGCCATCCAGTCACAGCTGGAAATCAACAGGGGCTaGTGGGCGCTGATGGTGCCATCATCCAGGATGAAGGTCACATCT +
Preference number: 6 (lower is better)
Translates to: PNMAAIQSQLEINRG*WALMVPSSRMKVTS
Trigger: AGATGTGACCTTCATCCTGGATGATGGCACCATCAGCGCCCACAAGCCCCTGTTGATTTCCAGCTGTGACTGGATGGCTGCCATGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251822.7
ENST00000519210.1
ENST00000519685.5
ENST00000522948.5
CDS CCA 72 bp ATGCGCAGATCAAAGACCTCGAGCAGCTCAGCAATGTaGGCAATGTGCATGAGGTCACGCTCGTTCTCATCT +
Preference number: 6 (lower is better)
Translates to: MRRSKTSSSSAM*AMCMRSRSFSS
Trigger: AGATGAGAACGAGCGTGACCTCATGCACATTGCCCACATTGCTGAGCTGCTCGAGGTCTTTGATCTGCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251822.7
ENST00000519685.5
ENST00000522948.5
CDS CAA 72 bp ACAAGCCCTCTGCTGCTTTGGGAATTTTCGTGGCACTaGAGAGCCTTCCTCCCTCCATGGCCCTTAATGAGT +
Preference number: 6 (lower is better)
Translates to: TSPLLLWEFSWH*RAFLPPWPLMS
Trigger: ACTCATTAAGGGCCATGGAGGGAGGAAGGCTCTCAAGTGCCACGAAAATTCCCAAAGCAGCAGAGGGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518534.1
CDS TCA 72 bp CCTCTCTCCTTTGGTAGTTGGTTCTGCTCACAGGGATaGCAGTTGATGTCAGGGATGAGAAAGTTATATGTT +
Preference number: 6 (lower is better)
Translates to: PLSFGSWFCSQG*QLMSGMRKLYV
Trigger: AACATATAACTTTCTCATCCCTGACATCAACTGTCATCCCTGTGAGCAGAACCAACTACCAAAGGAGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518534.1
ENST00000519685.5
ENST00000524077.5