Pregenerated sensors for RHOB (Homo sapiens)
Ensembl gene IDs: ENSG00000143878Ensembl transcript IDs: ENST00000272233.6
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGGAGCCCAGGCCTGTGCAACACAGCTGGACGCACACAGACACTaGGATGGGGGCGCCCGGTGCCCACGCCAAGTCCTGGCGCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: WGAQACATQLDAHRH*DGGARCPRQVLAQA Trigger: GGCTTGCGCCAGGACTTGGCGTGGGCACCGGGCGCCCCCATCCCAGTGTCTGTGTGCGTCCAGCTGTGTTGCACAGGCCTGGGCTCCCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR CCA 90 bp | GGACCCTTGGCACTCAGTGGGGAGCCCAGGCCTGTGCAACACAGCTaGACGCACACAGACACTGGGATGGGGGCGCCCGGTGCCCACGCC | + |
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Preference number: 1 (lower is better) Translates to: GPLALSGEPRPVQHS*THTDTGMGAPGAHA Trigger: GGCGTGGGCACCGGGCGCCCCCATCCCAGTGTCTGTGTGCGTCCAGCTGTGTTGCACAGGCCTGGGCTCCCCACTGAGTGCCAAGGGTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR GCA 90 bp | GCCCACGCCAAGTCCTGGCGCAAGCCAGAGGCGTCAGCAGACAGATaGCAGGCAGGCCGGTGGGGTCCTTGTGGGACACGGGTCTCCCCT | + |
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Preference number: 1 (lower is better) Translates to: AHAKSWRKPEASADR*QAGRWGPCGTRVSP Trigger: AGGGGAGACCCGTGTCCCACAAGGACCCCACCGGCCTGCCTGGCATCTGTCTGCTGACGCCTCTGGCTTGCGCCAGGACTTGGCGTGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR CCA 90 bp | AGCCCAGGCCTGTGCAACACAGCTGGACGCACACAGACACTGGGATaGGGGCGCCCGGTGCCCACGCCAAGTCCTGGCGCAAGCCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: SPGLCNTAGRTQTLG*GRPVPTPSPGASQR Trigger: CCTCTGGCTTGCGCCAGGACTTGGCGTGGGCACCGGGCGCCCCCATCCCAGTGTCTGTGTGCGTCCAGCTGTGTTGCACAGGCCTGGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR GCA 90 bp | GCAACACAGCTGGACGCACACAGACACTGGGATGGGGGCGCCCGGTaGCCACGCCAAGTCCTGGCGCAAGCCAGAGGCGTCAGCAGACAG | + |
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Preference number: 1 (lower is better) Translates to: ATQLDAHRHWDGGAR*PRQVLAQARGVSRQ Trigger: CTGTCTGCTGACGCCTCTGGCTTGCGCCAGGACTTGGCGTGGGCACCGGGCGCCCCCATCCCAGTGTCTGTGTGCGTCCAGCTGTGTTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR CCA 90 bp | TGTCTTCCCCAGGGGTTGGAAAGATGGTCAAGTCCTGTTCATGCTTaGGCGGGAGTCTGGCCCAGCCTGGGCCAGAGCGCTCACCCATCA | + |
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Preference number: 1 (lower is better) Translates to: CLPQGLERWSSPVHA*AGVWPSLGQSAHPS Trigger: TGATGGGTGAGCGCTCTGGCCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTTCCAACCCCTGGGGAAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGCCTGTGCAACACAGCTGGACGCACACAGACACTGGGATGGGGGCGCCCCCGGTGGGGTCCTTGTaGGACACGGGTCTCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PRPVQHSWTHTDTGMGAPPVGSL*DTGLPF Trigger: GAAGGGGAGACCCGTGTCCCACAAGGACCCCACCGG...GGGCGCCCCCATCCCAGTGTCTGTGTGCGTCCAGCTGTGTTGCACAGGCCTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR GCA 90 bp | TGGAAAGATGGTCAAGTCCTGTTCATGCTTGGGCGGGAGTCTGGCCCAGCCTGGGATGGGGGCGCCCGGTaGCCACGCCAAGTCCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: WKDGQVLFMLGRESGPAWDGGAR*PRQVLA Trigger: CGCCAGGACTTGGCGTGGGCACCGGGCGCCCCCATC...CCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTTCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGATGGTCAAGTCCTGTTCATGCTTGGGCGGGAGTCTGGCCCAGCCTGGGGACGCACACAGACACTaGGATGGGGGCGCCCGGTGC | + |
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Preference number: 2 (lower is better) Translates to: GKMVKSCSCLGGSLAQPGDAHRH*DGGARC Trigger: GCACCGGGCGCCCCCATCCCAGTGTCTGTGTGCGTC...CCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR CAA 90 bp | ATGTCTTCCCCAGGGGTTGGAAAGATGGTCAAGTCCTGTTCATGCTaGGGCGGGAGTCTGGCCCAGCCTGGGCCAGAGCGCTCACCCATC | + |
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Preference number: 2 (lower is better) Translates to: MSSPGVGKMVKSCSC*GGSLAQPGPERSPI Trigger: GATGGGTGAGCGCTCTGGCCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTTCCAACCCCTGGGGAAGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR GCA 90 bp | GTCTATGTTACAGACAAGGGATATCAAGCTCCCGCTGGTGAAGGGCGAACATCTGCGTCAGCAGACAGATaGCAGGCAGGCCGGTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: VYVTDKGYQAPAGEGRTSASADR*QAGRWG Trigger: ACCCCACCGGCCTGCCTGGCATCTGTCTGCTGACGC...AGATGTTCGCCCTTCACCAGCGGGAGCTTGATATCCCTTGTCTGTAACATAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR CCA 90 bp | AATAGGCCCCAATACTTGTTACTGCCCTTTATCAAAACTGTGTGCATGACCTGCGGGCTCGCGGGGGACTaGTCCAGGAGGGGGAGCCGT | + |
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Preference number: 2 (lower is better) Translates to: NRPQYLLLPFIKTVCMTCGLAGD*SRRGSR Trigger: ACGGCTCCCCCTCCTGGACCAGTCCCCCGCGAGCCC...GCAGGTCATGCACACAGTTTTGATAAAGGGCAGTAACAAGTATTGGGGCCTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR CCA 90 bp | AGGATATACAGGGGCAGGTGTATTCTCTGTACAGAGGTGCAGAGAAAATTTCACTGCCAGGCAGGCCGGTaGGGTCCTTGTGGGACACGG | + |
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Preference number: 2 (lower is better) Translates to: RIYRGRCILCTEVQRKFHCQAGR*GPCGTR Trigger: CCGTGTCCCACAAGGACCCCACCGGCCTGCCTGGCA...GTGAAATTTTCTCTGCACCTCTGTACAGAGAATACACCTGCCCCTGTATATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR CCA 90 bp | AGGATATACAGGGGCAGGTGTATTCTCTGTACAGAGGTGCAGAGAAAATTTCACACACAGACACTGGGATaGGGGCGCCCGGTGCCCACG | + |
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Preference number: 2 (lower is better) Translates to: RIYRGRCILCTEVQRKFHTQTLG*GRPVPT Trigger: CGTGGGCACCGGGCGCCCCCATCCCAGTGTCTGTGT...GTGAAATTTTCTCTGCACCTCTGTACAGAGAATACACCTGCCCCTGTATATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR CCA 90 bp | AGGATATACAGGGGCAGGTGTATTCTCTGTACAGAGGTGCAGAGAAAATTTCACCCCTCCGGTAGCTGGTaGAGGGTTCGCAGCGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: RIYRGRCILCTEVQRKFHPSGSW*RVRSGL Trigger: CAGCCCGCTGCGAACCCTCCACCAGCTACCGGAGGG...GTGAAATTTTCTCTGCACCTCTGTACAGAGAATACACCTGCCCCTGTATATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR CCA 90 bp | AATAGGCCCCAATACTTGTTACTGCCCTTTATCAAAACTGTGTGCATGACCTGCGCCCACGCCAAGTCCTaGCGCAAGCCAGAGGCGTCA | + |
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Preference number: 2 (lower is better) Translates to: NRPQYLLLPFIKTVCMTCAHAKS*RKPEAS Trigger: TGACGCCTCTGGCTTGCGCCAGGACTTGGCGTGGGC...GCAGGTCATGCACACAGTTTTGATAAAGGGCAGTAACAAGTATTGGGGCCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR CCA 90 bp | GTCTATGTTACAGACAAGGGATATCAAGCTCCCGCTGGTGAAGGGCGAACATCTCCTGTGCAACACAGCTaGACGCACACAGACACTGGG | + |
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Preference number: 2 (lower is better) Translates to: VYVTDKGYQAPAGEGRTSPVQHS*THTDTG Trigger: CCCAGTGTCTGTGTGCGTCCAGCTGTGTTGCACAGG...AGATGTTCGCCCTTCACCAGCGGGAGCTTGATATCCCTTGTCTGTAACATAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR TCA 90 bp | GTCAGAATGCTACTGTCGTATGCAAATGACGAGTGCATTAAGTGTCAAACAATGCACAGCCACACACTCTaGGGCCCGGCTCTTCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: VRMLLSYANDECIKCQTMHSHTL*GPALQK Trigger: TTTCTGAAGAGCCGGGCCTCAGAGTGTGTGGCTGTG...CATTGTTTGACACTTAATGCACTCGTCATTTGCATACGACAGTAGCATTCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGGATATACAGGGGCAGGTGTATTCTCTGTACAGAGGTGCAGAGAAAATTTCCACAAAGTTCGCTTATaGCAAAAACAACCCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: KGYTGAGVFSVQRCRENFHKVRL*QKQPHS Trigger: GCTGTGGGGTTGTTTTTGCCATAAGCGAACTTTGTG...GAAATTTTCTCTGCACCTCTGTACAGAGAATACACCTGCCCCTGTATATCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR GCA 72 bp | CTGGACGCACACAGACACTGGGATGGGGGCGCCCGGTaGCCACGCCAAGTCCTGGCGCAAGCCAGAGGCGTC | + |
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Preference number: 3 (lower is better) Translates to: LDAHRHWDGGAR*PRQVLAQARGV Trigger: GACGCCTCTGGCTTGCGCCAGGACTTGGCGTGGGCACCGGGCGCCCCCATCCCAGTGTCTGTGTGCGTCCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR CCA 72 bp | AGCAGACAGATGCCAGGCAGGCCGGTGGGGTCCTTGTaGGACACGGGTCTCCCCTTCTCCGGGCTCGCGGGG | + |
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Preference number: 3 (lower is better) Translates to: SRQMPGRPVGSL*DTGLPFSGLAG Trigger: CCCCGCGAGCCCGGAGAAGGGGAGACCCGTGTCCCACAAGGACCCCACCGGCCTGCCTGGCATCTGTCTGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR CAA 90 bp | CCCTTGGCACTCAGTGGGGAGCCCAGGCCTGTGCAACACAGCTGGACGCACACAAGGCCGGTGGGGTCCTaGTGGGACACGGGTCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: PLALSGEPRPVQHSWTHTRPVGS*WDTGLP Trigger: GGGGAGACCCGTGTCCCACAAGGACCCCACCGGCCT...TGTGTGCGTCCAGCTGTGTTGCACAGGCCTGGGCTCCCCACTGAGTGCCAAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR CCA 72 bp | CCAGAGGCGTCAGCAGACAGATGCCAGGCAGGCCGGTaGGGTCCTTGTGGGACACGGGTCTCCCCTTCTCCG | + |
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Preference number: 3 (lower is better) Translates to: PEASADRCQAGR*GPCGTRVSPSP Trigger: CGGAGAAGGGGAGACCCGTGTCCCACAAGGACCCCACCGGCCTGCCTGGCATCTGTCTGCTGACGCCTCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR CCA 72 bp | CTGTGCAACACAGCTGGACGCACACAGACACTGGGATaGGGGCGCCCGGTGCCCACGCCAAGTCCTGGCGCA | + |
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Preference number: 3 (lower is better) Translates to: LCNTAGRTQTLG*GRPVPTPSPGA Trigger: TGCGCCAGGACTTGGCGTGGGCACCGGGCGCCCCCATCCCAGTGTCTGTGTGCGTCCAGCTGTGTTGCACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR CCA 72 bp | CAGGCCTGTGCAACACAGCTGGACGCACACAGACACTaGGATGGGGGCGCCCGGTGCCCACGCCAAGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: QACATQLDAHRH*DGGARCPRQVL Trigger: CAGGACTTGGCGTGGGCACCGGGCGCCCCCATCCCAGTGTCTGTGTGCGTCCAGCTGTGTTGCACAGGCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR CCA 72 bp | CTCCCTCCGGTAGCTGGTGGAGGGTTCGCAGCGGGCTaGCCCGCAGGAGAGGCTGTGCTGAAGCTGTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: LPPVAGGGFAAG*PAGEAVLKLCP Trigger: AGGACACAGCTTCAGCACAGCCTCTCCTGCGGGCCAGCCCGCTGCGAACCCTCCACCAGCTACCGGAGGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR GCA 72 bp | AAGTCCTGGCGCAAGCCAGAGGCGTCAGCAGACAGATaGCAGGCAGGCCGGTGGGGTCCTTGTGGGACACGG | + |
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Preference number: 3 (lower is better) Translates to: KSWRKPEASADR*QAGRWGPCGTR Trigger: CCGTGTCCCACAAGGACCCCACCGGCCTGCCTGGCATCTGTCTGCTGACGCCTCTGGCTTGCGCCAGGACTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR GCA 72 bp | TCCCCAGGGGTTGGAAAGATGGTCAAGTCCTGTTCATaGTTGGGCGGGAGTCTGGCCCAGCCTGGGCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: SPGVGKMVKSCS*LGGSLAQPGPE Trigger: CTCTGGCCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTTCCAACCCCTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR CCA 72 bp | CAGGGGTTGGAAAGATGGTCAAGTCCTGTTCATGCTTaGGCGGGAGTCTGGCCCAGCCTGGGCCAGAGCGCT | + |
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Preference number: 3 (lower is better) Translates to: QGLERWSSPVHA*AGVWPSLGQSA Trigger: AGCGCTCTGGCCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTTCCAACCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGGATATACAGGGGCAGGTGTATTCTCTGTACAGAGGTGCAGAGAAAATTTCAATCACAAAACAGTGTaGCCACATTCTTCAAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: KGYTGAGVFSVQRCRENFNHKTV*PHSSRK Trigger: TTTCCTTGAAGAATGTGGCAACACTGTTTTGTGATT...GAAATTTTCTCTGCACCTCTGTACAGAGAATACACCTGCCCCTGTATATCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| 3UTR GCA 72 bp | GTGGTCAGAATGCTACTGTCGTATGCAAATGACGAGTaGATTAAGTGTCAAACAATGAAACAATTGTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: VVRMLLSYANDE*IKCQTMKQLCK Trigger: TTTGCACAATTGTTTCATTGTTTGACACTTAATGCACTCGTCATTTGCATACGACAGTAGCATTCTGACCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR GCA 90 bp | GGGCGAACATCTGATGGGGCGCGGCCACACTCCCGCGCCAATCTCGCCCCCGGGGATGGGGGCGCCCGGTaGCCACGCCAAGTCCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: GRTSDGARPHSRANLAPGDGGAR*PRQVLA Trigger: CGCCAGGACTTGGCGTGGGCACCGGGCGCCCCCATC...CCCGGGGGCGAGATTGGCGCGGGAGTGTGGCCGCGCCCCATCAGATGTTCGCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR CCA 90 bp | GGGGCGCCCGGTGCCCACGCCAAGTCCTGGCGCAAGCCAGAGGCGTCAGCAGACGCAGCGCGGCGCGCGTaGCCGTCTCGAAGACCTCGC | + |
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Preference number: 4 (lower is better) Translates to: GAPGAHAKSWRKPEASADAARRA*PSRRPR Trigger: GCGAGGTCTTCGAGACGGCCACGCGCGCCGCGCTGC...GTCTGCTGACGCCTCTGGCTTGCGCCAGGACTTGGCGTGGGCACCGGGCGCCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR GCA 90 bp | CTTCTCCGGGCTCGCGGGGGACTGGTCCAGGAGGGGGAGCCGTGCCGGCAGGGGCGCGGCCGTCATCCGTaGGCACGGGTTCCTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LLRARGGLVQEGEPCRQGRGRHP*ARVPAS Trigger: TGAAGCAGGAACCCGTGCGCACGGATGACGGCCGCG...CCCCTGCCGGCACGGCTCCCCCTCCTGGACCAGTCCCCCGCGAGCCCGGAGAAG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR TCA 90 bp | CTTCTCCGGGCTCGCGGGGGACTGGTCCAGGAGGGGGAGCCGTGCCGGCAGGGGCACAGCCACACACTCTaGGGCCCGGCTCTTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LLRARGGLVQEGEPCRQGHSHTL*GPALQK Trigger: TTTCTGAAGAGCCGGGCCTCAGAGTGTGTGGCTGTG...CCCCTGCCGGCACGGCTCCCCCTCCTGGACCAGTCCCCCGCGAGCCCGGAGAAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR GCA 90 bp | ACTGGGATGGGGGCGCCCGGTGCCCACGCCAAGTCCTGGCGCAAGCCAGAGGCGGTGCGCACGGGTTCCTaGTTCATGCGGGCCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TGMGAPGAHAKSWRKPEAVRTGS*FMRASS Trigger: AGAGCTGGCCCGCATGAAGCAGGAACCCGTGCGCAC...CGCCTCTGGCTTGCGCCAGGACTTGGCGTGGGCACCGGGCGCCCCCATCCCAGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR CCA 90 bp | ACTGGGATGGGGGCGCCCGGTGCCCACGCCAAGTCCTGGCGCAAGCCAGAGGCGAGCAGACTCGGGCGGTaGACTCGGCCTAGCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: TGMGAPGAHAKSWRKPEASRLGR*TRPSSL Trigger: GAGAGAGCTAGGCCGAGTCCACCGCCCGAGTCTGCT...CGCCTCTGGCTTGCGCCAGGACTTGGCGTGGGCACCGGGCGCCCCCATCCCAGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR CCA 90 bp | GCCTGTGCAACACAGCTGGACGCACACAGACACTGGGATGGGGGCGCCCGGTGCGGGTTCGCAGCGGGCTaGCCCGCAGGAGAGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: ACATQLDAHRHWDGGARCGFAAG*PAGEAV Trigger: CACAGCCTCTCCTGCGGGCCAGCCCGCTGCGAACCC...GCACCGGGCGCCCCCATCCCAGTGTCTGTGTGCGTCCAGCTGTGTTGCACAGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR GCA 90 bp | GACCCTTGGCACTCAGTGGGGAGCCCAGGCCTGTGCAACACAGCTGGACGCACAGGCGCGTTCTCTCGCTaGGCTTCGGCTGCCGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: DPWHSVGSPGLCNTAGRTGAFSR*ASAAAA Trigger: CGCCGCGGCAGCCGAAGCGCAGCGAGAGAACGCGCC...TGTGCGTCCAGCTGTGTTGCACAGGCCTGGGCTCCCCACTGAGTGCCAAGGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR CCA 90 bp | GGGCGAACATCTGATGGGGCGCGGCCACACTCCCGCGCCAATCTCGCCCCCGGGCGCGCACGCCTTCCTTaGTCTTGGCAGAGCACTCGA | + |
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Preference number: 4 (lower is better) Translates to: GRTSDGARPHSRANLAPGRARLP*SWQSTR Trigger: TCGAGTGCTCTGCCAAGACCAAGGAAGGCGTGCGCG...CCCGGGGGCGAGATTGGCGCGGGAGTGTGGCCGCGCCCCATCAGATGTTCGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR GCA 90 bp | CCCTTGGCACTCAGTGGGGAGCCCAGGCCTGTGCAACACAGCTGGACGCACACACTGCTCACCTCGGGCTaGGCGCAGGTGGCGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: PLALSGEPRPVQHSWTHTLLTSG*AQVARG Trigger: CCCTCTCGCCACCTGCGCGCAGCCCGAGGTGAGCAG...TGTGTGCGTCCAGCTGTGTTGCACAGGCCTGGGCTCCCCACTGAGTGCCAAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR CCA 90 bp | GACCCTTGGCACTCAGTGGGGAGCCCAGGCCTGTGCAACACAGCTGGACGCACACCCTCCGGTAGCTGGTaGAGGGTTCGCAGCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: DPWHSVGSPGLCNTAGRTPSGSW*RVRSGL Trigger: CAGCCCGCTGCGAACCCTCCACCAGCTACCGGAGGG...TGTGCGTCCAGCTGTGTTGCACAGGCCTGGGCTCCCCACTGAGTGCCAAGGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR GCA 90 bp | GACCCTTGGCACTCAGTGGGGAGCCCAGGCCTGTGCAACACAGCTGGACGCACAGCGTCAGCAGACAGATaGCAGGCAGGCCGGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: DPWHSVGSPGLCNTAGRTASADR*QAGRWG Trigger: ACCCCACCGGCCTGCCTGGCATCTGTCTGCTGACGC...TGTGCGTCCAGCTGTGTTGCACAGGCCTGGGCTCCCCACTGAGTGCCAAGGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR TCA 90 bp | CCCAGGCCTGTGCAACACAGCTGGACGCACACAGACACTGGGATGGGGGCGCCCGGAACTCGTCCTTACTaGACACGATCAGCAGGCACG | + |
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Preference number: 4 (lower is better) Translates to: PRPVQHSWTHTDTGMGAPGTRPY*TRSAGT Trigger: CGTGCCTGCTGATCGTGTTCAGTAAGGACGAGTTCC...GGGCGCCCCCATCCCAGTGTCTGTGTGCGTCCAGCTGTGTTGCACAGGCCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR GCA 90 bp | GGAAAGATGGTCAAGTCCTGTTCATGCTTGGGCGGGAGTCTGGCCCAGCCTGGGTGCGGGCCAGCTCTGTaGGGACATGCTCGTCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GKMVKSCSCLGGSLAQPGCGPAL*GHARRC Trigger: GCAGCGACGAGCATGTCCGCACAGAGCTGGCCCGCA...CCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR GCA 90 bp | GGAAAGATGGTCAAGTCCTGTTCATGCTTGGGCGGGAGTCTGGCCCAGCCTGGGAGTCGTAGGCTTGGATaGGCACGGCCATGGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GKMVKSCSCLGGSLAQPGSRRLG*ARPWRG Trigger: GCCGCGCCATGGCCGTGCGCATCCAAGCCTACGACT...CCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR CCA 90 bp | AAAGATGGTCAAGTCCTGTTCATGCTTGGGCGGGAGTCTGGCCCAGCCTGGGCCCCGGTGGGGTCCTTGTaGGACACGGGTCTCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: KDGQVLFMLGRESGPAWAPVGSL*DTGLPF Trigger: GAAGGGGAGACCCGTGTCCCACAAGGACCCCACCGG...GGCCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR GCA 90 bp | GAGTCGAACAGACACACAGCCACACACTCTGAGGCCCGGCTCTTCAGAAAAGCAGGGCGGTGGTCGCTCTaGTCACCCCAGGCCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ESNRHTATHSEARLFRKAGRWSL*SPQAGD Trigger: ATCCCCGGCCTGGGGTGAGCAGAGCGACCACCGCCC...TGCTTTTCTGAAGAGCCGGGCCTCAGAGTGTGTGGCTGTGTGTCTGTTCGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR GCA 90 bp | GGAAAGATGGTCAAGTCCTGTTCATGCTTGGGCGGGAGTCTGGCCCAGCCTGGGCGGGTTCCTGCTTCATaGGGGCCAGCTCTGTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKMVKSCSCLGGSLAQPGRVPAS*GPALCG Trigger: TCCGCACAGAGCTGGCCCGCATGAAGCAGGAACCCG...CCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | GAGTCGAACAGACACACAGCCACACACTCTGAGGCCCGGCTCTTCAGAAAAGCATGCCAGGCAGGCCGGTaGGGTCCTTGTGGGACACGG | + |
|
Preference number: 4 (lower is better) Translates to: ESNRHTATHSEARLFRKACQAGR*GPCGTR Trigger: CCGTGTCCCACAAGGACCCCACCGGCCTGCCTGGCA...TGCTTTTCTGAAGAGCCGGGCCTCAGAGTGTGTGGCTGTGTGTCTGTTCGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | GAGTCGAACAGACACACAGCCACACACTCTGAGGCCCGGCTCTTCAGAAAAGCAGACGCACACAGACACTaGGATGGGGGCGCCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESNRHTATHSEARLFRKADAHRH*DGGARC Trigger: GCACCGGGCGCCCCCATCCCAGTGTCTGTGTGCGTC...TGCTTTTCTGAAGAGCCGGGCCTCAGAGTGTGTGGCTGTGTGTCTGTTCGACTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | TGGAAAGATGGTCAAGTCCTGTTCATGCTTGGGCGGGAGTCTGGCCCAGCCTGGACCCTTGGCACTCAGTaGGGAGCCCAGGCCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WKDGQVLFMLGRESGPAWTLGTQ*GAQACA Trigger: TGCACAGGCCTGGGCTCCCCACTGAGTGCCAAGGGT...CCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | GAGTCGAACAGACACACAGCCACACACTCTGAGGCCCGGCTCTTCAGAAAAGCACCTCCCTCCGGTAGCTaGTGGAGGGTTCGCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESNRHTATHSEARLFRKAPPSGS*WRVRSG Trigger: CCCGCTGCGAACCCTCCACCAGCTACCGGAGGGAGG...TGCTTTTCTGAAGAGCCGGGCCTCAGAGTGTGTGGCTGTGTGTCTGTTCGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR TCA 90 bp | GGAAAGATGGTCAAGTCCTGTTCATGCTTGGGCGGGAGTCTGGCCCAGCCTGGGCTCTCCGGGCCTCGCTaGGCATACAAGACAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKMVKSCSCLGGSLAQPGLSGPR*AYKTTA Trigger: AGCTGTTGTCTTGTATGCTCAGCGAGGCCCGGAGAG...CCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR GCA 90 bp | CTTCTCCGGGCTCGCGGGGGACTGGTCCAGGAGGGGGAGCCGTGCCGGCAGGGGTATGCAAATGACGAGTaGATTAAGTGTCAAACAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLRARGGLVQEGEPCRQGYANDE*IKCQTM Trigger: CATTGTTTGACACTTAATGCACTCGTCATTTGCATA...CCCCTGCCGGCACGGCTCCCCCTCCTGGACCAGTCCCCCGCGAGCCCGGAGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR GCA 90 bp | GGAAAGATGGTCAAGTCCTGTTCATGCTTGGGCGGGAGTCTGGCCCAGCCTGGGACATTGGGACAGAAGTaGTTCACCTCGGGGACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GKMVKSCSCLGGSLAQPGTLGQK*FTSGTH Trigger: GTGGGTCCCCGAGGTGAAGCACTTCTGTCCCAATGT...CCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | GTCTATGTTACAGACAAGGGATATCAAGCTCCCGCTGGTGAAGGGCGAACATCTGCTGCTCCCGGGCGGTaGTCGCTCTGCTCACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VYVTDKGYQAPAGEGRTSAAPGR*SLCSPQ Trigger: CTGGGGTGAGCAGAGCGACCACCGCCCGGGAGCAGC...AGATGTTCGCCCTTCACCAGCGGGAGCTTGATATCCCTTGTCTGTAACATAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR TCA 90 bp | TGGAAAGATGGTCAAGTCCTGTTCATGCTTGGGCGGGAGTCTGGCCCAGCCTGGTGTTGGCCACCAGGATaGTGGGCACATTGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WKDGQVLFMLGRESGPAWCWPPG*WAHWDR Trigger: TCTGTCCCAATGTGCCCATCATCCTGGTGGCCAACA...CCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR TCA 90 bp | GTTACAGACAAGGGATATCAAGCTCCCGCTGGTGAAGGGCGAACATCTGATGGGCAGGAGAGGCTGTGCTaGAGCTGTGTCCTCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTDKGYQAPAGEGRTSDGQERLC*SCVLPK Trigger: CTTGGGGAGGACACAGCTTCAGCACAGCCTCTCCTG...CCCATCAGATGTTCGCCCTTCACCAGCGGGAGCTTGATATCCCTTGTCTGTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR GCA 90 bp | GAGTCGAACAGACACACAGCCACACACTCTGAGGCCCGGCTCTTCAGAAAAGCAGTCAAGTCCTGTTCATaGTTGGGCGGGAGTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ESNRHTATHSEARLFRKAVKSCS*LGGSLA Trigger: GGCCAGACTCCCGCCCAAGCATGAACAGGACTTGAC...TGCTTTTCTGAAGAGCCGGGCCTCAGAGTGTGTGGCTGTGTGTCTGTTCGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | AGGATATACAGGGGCAGGTGTATTCTCTGTACAGAGGTGCAGAGAAAATTTCACGGGCTCGCGGGGGACTaGTCCAGGAGGGGGAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RIYRGRCILCTEVQRKFHGLAGD*SRRGSR Trigger: ACGGCTCCCCCTCCTGGACCAGTCCCCCGCGAGCCC...GTGAAATTTTCTCTGCACCTCTGTACAGAGAATACACCTGCCCCTGTATATCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | GTTACAGACAAGGGATATCAAGCTCCCGCTGGTGAAGGGCGAACATCTGATGGGCCTGTGCAACACAGCTaGACGCACACAGACACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTDKGYQAPAGEGRTSDGPVQHS*THTDTG Trigger: CCCAGTGTCTGTGTGCGTCCAGCTGTGTTGCACAGG...CCCATCAGATGTTCGCCCTTCACCAGCGGGAGCTTGATATCCCTTGTCTGTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR GCA 90 bp | GTCAGAATGCTACTGTCGTATGCAAATGACGAGTGCATTAAGTGTCAAACAATGGAGAGGGTCGCTAGCTaGACCCGGGCCCCGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRMLLSYANDECIKCQTMERVAS*TRAPRW Trigger: CCACCGCGGGGCCCGGGTGCAGCTAGCGACCCTCTC...CATTGTTTGACACTTAATGCACTCGTCATTTGCATACGACAGTAGCATTCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | AAAGGATATACAGGGGCAGGTGTATTCTCTGTACAGAGGTGCAGAGAAAATTTCGGATGCGCACGGCCATaGCGCGGCCGTCATCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGYTGAGVFSVQRCRENFGCARP*RGRHPC Trigger: GCACGGATGACGGCCGCGCCATGGCCGTGCGCATCC...GAAATTTTCTCTGCACCTCTGTACAGAGAATACACCTGCCCCTGTATATCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | AAAGGATATACAGGGGCAGGTGTATTCTCTGTACAGAGGTGCAGAGAAAATTTCGCTTGGGCGGGAGTCTaGCCCAGCCTGGGCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGYTGAGVFSVQRCRENFAWAGV*PSLGQS Trigger: GCTCTGGCCCAGGCTGGGCCAGACTCCCGCCCAAGC...GAAATTTTCTCTGCACCTCTGTACAGAGAATACACCTGCCCCTGTATATCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | AAAGATGGTCAAGTCCTGTTCATGCTTGGGCGGGAGTCTGGCCCAGCCTGGGCCCACAAAGTTCGCTTATaGCAAAAACAACCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KDGQVLFMLGRESGPAWAHKVRL*QKQPHS Trigger: GCTGTGGGGTTGTTTTTGCCATAAGCGAACTTTGTG...GGCCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | AAAGATGGTCAAGTCCTGTTCATGCTTGGGCGGGAGTCTGGCCCAGCCTGGGCCTACAGCGTACAAGTGTaGTCAGAATGCTACTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KDGQVLFMLGRESGPAWAYSVQV*SECYCR Trigger: ACGACAGTAGCATTCTGACCACACTTGTACGCTGTA...GGCCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR GCA 90 bp | CCCTTGGCACTCAGTGGGGAGCCCAGGCCTGTGCAACACAGCTGGACGCACACACCCAATACTTGTTACTaGCCTTTATCAAAACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLALSGEPRPVQHSWTHTPNTCY*PLSKLC Trigger: ACACAGTTTTGATAAAGGGCAGTAACAAGTATTGGG...TGTGTGCGTCCAGCTGTGTTGCACAGGCCTGGGCTCCCCACTGAGTGCCAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | AAAGGATATACAGGGGCAGGTGTATTCTCTGTACAGAGGTGCAGAGAAAATTTCACACAGACACTGGGATaGGGGCGCCCGGTGCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: KGYTGAGVFSVQRCRENFTQTLG*GRPVPT Trigger: CGTGGGCACCGGGCGCCCCCATCCCAGTGTCTGTGT...GAAATTTTCTCTGCACCTCTGTACAGAGAATACACCTGCCCCTGTATATCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR GCA 90 bp | AATAGGCCCCAATACTTGTTACTGCCCTTTATCAAAACTGTGTGCATGACCTGCAGCTCTGTGCGGACATaGTCGTCGCTGCGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRPQYLLLPFIKTVCMTCSSVRT*SSLRRS Trigger: AGACCTGCGCAGCGACGAGCATGTCCGCACAGAGCT...GCAGGTCATGCACACAGTTTTGATAAAGGGCAGTAACAAGTATTGGGGCCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | GTCTATGTTACAGACAAGGGATATCAAGCTCCCGCTGGTGAAGGGCGAACATCTGTCTTCCCCAGGGGTTaGAAAGATGGTCAAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VYVTDKGYQAPAGEGRTSVFPRG*KDGQVL Trigger: CAGGACTTGACCATCTTTCCAACCCCTGGGGAAGAC...AGATGTTCGCCCTTCACCAGCGGGAGCTTGATATCCCTTGTCTGTAACATAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR GCA 90 bp | ACTGAACAATTTTCACTTCTAGGACAGGCACAAAGTTCGCTTATGGCAAAAACAGGATCGGCGGCTTTGTaGGTAACGCGGGCTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TEQFSLLGQAQSSLMAKTGSAAL*VTRARA Trigger: TGCCCGAGCCCGCGTTACGCACAAAGCCGCCGATCC...TGTTTTTGCCATAAGCGAACTTTGTGCCTGTCCTAGAAGTGAAAATTGTTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | AAAGGATATACAGGGGCAGGTGTATTCTCTGTACAGAGGTGCAGAGAAAATTTCAGTCCTGTTCATGCTTaGGCGGGAGTCTGGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGYTGAGVFSVQRCRENFSPVHA*AGVWPS Trigger: GCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACT...GAAATTTTCTCTGCACCTCTGTACAGAGAATACACCTGCCCCTGTATATCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR GCA 90 bp | TCGTATGCAAATGACGAGTGCATTAAGTGTCAAACAATGAAACAATTGTGCAAATCAGCAGGCACGTCTTaGCACACGCGCCGTCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SYANDECIKCQTMKQLCKSAGTS*HTRRRP Trigger: TGGGCGACGGCGCGTGTGGCAAGACGTGCCTGCTGA...TTTGCACAATTGTTTCATTGTTTGACACTTAATGCACTCGTCATTTGCATACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CCA 90 bp | TCGTATGCAAATGACGAGTGCATTAAGTGTCAAACAATGAAACAATTGTGCAAAGCCCACGCCAAGTCCTaGCGCAAGCCAGAGGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SYANDECIKCQTMKQLCKAHAKS*RKPEAS Trigger: TGACGCCTCTGGCTTGCGCCAGGACTTGGCGTGGGC...TTTGCACAATTGTTTCATTGTTTGACACTTAATGCACTCGTCATTTGCATACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR GCA 90 bp | TCGTATGCAAATGACGAGTGCATTAAGTGTCAAACAATGAAACAATTGTGCAAACCTCCCCAAGTCAGTTaGAAATGTCTTCCCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SYANDECIKCQTMKQLCKPPQVS*KCLPQG Trigger: CCCCTGGGGAAGACATTTGCAACTGACTTGGGGAGG...TTTGCACAATTGTTTCATTGTTTGACACTTAATGCACTCGTCATTTGCATACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR GCA 90 bp | AGGATATACAGGGGCAGGTGTATTCTCTGTACAGAGGTGCAGAGAAAATTTCACCAAGTGTGGTCAGAATaGTACTGTCGTATGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: RIYRGRCILCTEVQRKFHQVWSE*YCRMQM Trigger: CATTTGCATACGACAGTAGCATTCTGACCACACTTG...GTGAAATTTTCTCTGCACCTCTGTACAGAGAATACACCTGCCCCTGTATATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR TCA 90 bp | ACTGAACAATTTTCACTTCTAGGACAGGCACAAAGTTCGCTTATGGCAAAAACAAACATCAGAAGTAGATaGGGTTACAGCGTACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TEQFSLLGQAQSSLMAKTNIRSR*GYSVQV Trigger: CACTTGTACGCTGTAACCTCATCTACTTCTGATGTT...TGTTTTTGCCATAAGCGAACTTTGTGCCTGTCCTAGAAGTGAAAATTGTTCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR TCA 90 bp | AAAGGATATACAGGGGCAGGTGTATTCTCTGTACAGAGGTGCAGAGAAAATTTCTCAAAACTGTGTGCATaGCCTGCACAAATAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KGYTGAGVFSVQRCRENFSKLCA*PAQIKS Trigger: TGATTTTATTTGTGCAGGTCATGCACACAGTTTTGA...GAAATTTTCTCTGCACCTCTGTACAGAGAATACACCTGCCCCTGTATATCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS GCA 90 bp | ACGCCTCGCTGCCCTCCCGCTCGCCGCTCACTGCTCACCTCGGGCTaGGCGCAGGTGGCGAGAGGGTCGCTAGCTGCACCCGGGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TPRCPPARRSLLTSG*AQVARGSLAAPGPR Trigger: GCGGGGCCCGGGTGCAGCTAGCGACCCTCTCGCCACCTGCGCGCAGCCCGAGGTGAGCAGTGAGCGGCGAGCGGGAGGGCAGCGAGGCGT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS GCA 90 bp | GCGGTGGTCGCTCTGCTCACCCCAGGCCGGGGATCGGCGGCTTTGTaGGTAACGCGGGCTCGGGCAGCAGACTCGGGCGGTGGACTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AVVALLTPGRGSAAL*VTRARAADSGGGLG Trigger: GCCGAGTCCACCGCCCGAGTCTGCTGCCCGAGCCCGCGTTACGCACAAAGCCGCCGATCCCCGGCCTGGGGTGAGCAGAGCGACCACCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CAA 90 bp | CTTCTCCGGGCTCGCGGGGGACTGGTCCAGGAGGGGGAGCCGTGCCGGCAGGGGGAGGTAGTCGTAGGCTaGGATGCGCACGGCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLRARGGLVQEGEPCRQGEVVVG*DAHGHG Trigger: GCCATGGCCGTGCGCATCCAAGCCTACGACTACCTC...CCCCTGCCGGCACGGCTCCCCCTCCTGGACCAGTCCCCCGCGAGCCCGGAGAAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS TCA 90 bp | GGGGCAGGCGCGACGGGCGCGGCCCTCATAGCACCTTGCAGCAGTTaGTGCAGCCGTTCTGGGAGCCGTAGCGCTTCTGCAGCGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GAGATGAALIAPCSS*CSRSGSRSASAARR Trigger: GCGCCGCGCTGCAGAAGCGCTACGGCTCCCAGAACGGCTGCATCAACTGCTGCAAGGTGCTATGAGGGCCGCGCCCGTCGCGCCTGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS GCA 90 bp | ATGCGCACGGCCATGGCGCGGCCGTCATCCGTGCGCACGGGTTCCTaGTTCATGCGGGCCAGCTCTGTGCGGACATGCTCGTCGCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: MRTAMARPSSVRTGS*FMRASSVRTCSSLR Trigger: GCGCAGCGACGAGCATGTCCGCACAGAGCTGGCCCGCATGAAGCAGGAACCCGTGCGCACGGATGACGGCCGCGCCATGGCCGTGCGCAT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CAA 90 bp | CCCAGGCCTGTGCAACACAGCTGGACGCACACAGACACTGGGATGGGGGCGCCCAGGCCGGTGGGGTCCTaGTGGGACACGGGTCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PRPVQHSWTHTDTGMGAPRPVGS*WDTGLP Trigger: GGGGAGACCCGTGTCCCACAAGGACCCCACCGGCCT...GGGCGCCCCCATCCCAGTGTCTGTGTGCGTCCAGCTGTGTTGCACAGGCCTGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS GCA 90 bp | CGGCCATGGCGCGGCCGTCATCCGTGCGCACGGGTTCCTGCTTCATaGGGGCCAGCTCTGTGCGGACATGCTCGTCGCTGCGCAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RPWRGRHPCARVPAS*GPALCGHARRCAGL Trigger: AAGACCTGCGCAGCGACGAGCATGTCCGCACAGAGCTGGCCCGCATGAAGCAGGAACCCGTGCGCACGGATGACGGCCGCGCCATGGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CAA 90 bp | GGGCGAACATCTGATGGGGCGCGGCCACACTCCCGCGCCAATCTCGCCCCCGGGAAGTCCTGTTCATGCTaGGGCGGGAGTCTGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRTSDGARPHSRANLAPGKSCSC*GGSLAQ Trigger: CTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTT...CCCGGGGGCGAGATTGGCGCGGGAGTGTGGCCGCGCCCCATCAGATGTTCGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS GCA 90 bp | AGTCGTAGGCTTGGATGCGCACGGCCATGGCGCGGCCGTCATCCGTaGGCACGGGTTCCTGCTTCATGCGGGCCAGCTCTGTGCGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: SRRLGCARPWRGRHP*ARVPASCGPALCGH Trigger: ATGTCCGCACAGAGCTGGCCCGCATGAAGCAGGAACCCGTGCGCACGGATGACGGCCGCGCCATGGCCGTGCGCATCCAAGCCTACGACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CAA 90 bp | GCCTGTGCAACACAGCTGGACGCACACAGACACTGGGATGGGGGCGCCCGGTGCTCGCGCACGCCTTCCTaGGTCTTGGCAGAGCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: ACATQLDAHRHWDGGARCSRTPS*VLAEHS Trigger: CGAGTGCTCTGCCAAGACCAAGGAAGGCGTGCGCGA...GCACCGGGCGCCCCCATCCCAGTGTCTGTGTGCGTCCAGCTGTGTTGCACAGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CAA 90 bp | AAAGATGGTCAAGTCCTGTTCATGCTTGGGCGGGAGTCTGGCCCAGCCTGGGCCCGGGGATCGGCGGCTTaGTGCGTAACGCGGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: KDGQVLFMLGRESGPAWARGSAA*CVTRAR Trigger: CCGAGCCCGCGTTACGCACAAAGCCGCCGATCCCCG...GGCCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACTTGACCATCTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CAA 90 bp | GACCCTTGGCACTCAGTGGGGAGCCCAGGCCTGTGCAACACAGCTGGACGCACAACCACCACCAGCTTCTaGCGGATGGCCGCCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DPWHSVGSPGLCNTAGRTTTTSF*RMAAMS Trigger: GCTCATGGCGGCCATCCGCAAGAAGCTGGTGGTGGT...TGTGCGTCCAGCTGTGTTGCACAGGCCTGGGCTCCCCACTGAGTGCCAAGGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CAA 90 bp | GACCCTTGGCACTCAGTGGGGAGCCCAGGCCTGTGCAACACAGCTGGACGCACAAGCACCTTGCAGCAGTaGATGCAGCCGTTCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DPWHSVGSPGLCNTAGRTSTLQQ*MQPFWE Trigger: CTCCCAGAACGGCTGCATCAACTGCTGCAAGGTGCT...TGTGCGTCCAGCTGTGTTGCACAGGCCTGGGCTCCCCACTGAGTGCCAAGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
||
| CDS-3UTR CAA 90 bp | CCCAGGCCTGTGCAACACAGCTGGACGCACACAGACACTGGGATGGGGGCGCCCTGTCTTCCCCAGGGGTaGGAAAGATGGTCAAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: PRPVQHSWTHTDTGMGAPCLPQG*ERWSSP Trigger: AGGACTTGACCATCTTTCCAACCCCTGGGGAAGACA...GGGCGCCCCCATCCCAGTGTCTGTGTGCGTCCAGCTGTGTTGCACAGGCCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR CAA 90 bp | CTTCTCCGGGCTCGCGGGGGACTGGTCCAGGAGGGGGAGCCGTGCCGGCAGGGGAATAGGCCCCAATACTaGTTACTGCCCTTTATCAAA | + |
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Preference number: 5 (lower is better) Translates to: LLRARGGLVQEGEPCRQGNRPQY*LLPFIK Trigger: TTTGATAAAGGGCAGTAACAAGTATTGGGGCCTATT...CCCCTGCCGGCACGGCTCCCCCTCCTGGACCAGTCCCCCGCGAGCCCGGAGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR CAA 90 bp | GGGTCTATGTTACAGACAAGGGATATCAAGCTCCCGCTGGTGAAGGGCGAACATATCAGCAGGCACGTCTaGCCACACGCGCCGTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: GSMLQTRDIKLPLVKGEHISRHV*PHAPSP Trigger: GGGCGACGGCGCGTGTGGCAAGACGTGCCTGCTGAT...ATGTTCGCCCTTCACCAGCGGGAGCTTGATATCCCTTGTCTGTAACATAGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR CAA 90 bp | GTCAGAATGCTACTGTCGTATGCAAATGACGAGTGCATTAAGTGTCAAACAATGGGCCCTCATAGCACCTaGCAGCAGTTGATGCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: VRMLLSYANDECIKCQTMGPHST*QQLMQP Trigger: CGGCTGCATCAACTGCTGCAAGGTGCTATGAGGGCC...CATTGTTTGACACTTAATGCACTCGTCATTTGCATACGACAGTAGCATTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR CAA 90 bp | AGGATATACAGGGGCAGGTGTATTCTCTGTACAGAGGTGCAGAGAAAATTTCACTCCTCCCCAAGTCAGTaGCAAATGTCTTCCCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RIYRGRCILCTEVQRKFHSSPSQ*QMSSPG Trigger: CCCTGGGGAAGACATTTGCAACTGACTTGGGGAGGA...GTGAAATTTTCTCTGCACCTCTGTACAGAGAATACACCTGCCCCTGTATATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS-3UTR CAA 90 bp | GAGTCGAACAGACACACAGCCACACACTCTGAGGCCCGGCTCTTCAGAAAAGCAAATCACAAAACAGTGTaGCCACATTCTTCAAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: ESNRHTATHSEARLFRKANHKTV*PHSSRK Trigger: TTTCCTTGAAGAATGTGGCAACACTGTTTTGTGATT...TGCTTTTCTGAAGAGCCGGGCCTCAGAGTGTGTGGCTGTGTGTCTGTTCGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS CCA 72 bp | GCGCACCGTGCGTCTCGCCGCGCTGCTCCCGGGCGGTaGTCGCTCTGCTCACCCCAGGCCGGGGATCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: AHRASRRAAPGR*SLCSPQAGDRR Trigger: CCGCCGATCCCCGGCCTGGGGTGAGCAGAGCGACCACCGCCCGGGAGCAGCGCGGCGAGACGCACGGTGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS CCA 72 bp | GGCGAGAGGGTCGCTAGCTGCACCCGGGCCCCGCGGTaGCGCGTTCTCTCGCTGCGCTTCGGCTGCCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: GERVASCTRAPR*RVLSLRFGCRG Trigger: GCCGCGGCAGCCGAAGCGCAGCGAGAGAACGCGCCACCGCGGGGCCCGGGTGCAGCTAGCGACCCTCTCGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS GCA 72 bp | GCGTCTCGCCGCGCTGCTCCCGGGCGGTGGTCGCTCTaGTCACCCCAGGCCGGGGATCGGCGGCTTTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: ASRRAAPGRWSL*SPQAGDRRLCA Trigger: CGCACAAAGCCGCCGATCCCCGGCCTGGGGTGAGCAGAGCGACCACCGCCCGGGAGCAGCGCGGCGAGACGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS GCA 72 bp | CGCGAACGCCTCGCTGCCCTCCCGCTCGCCGCTCACTaGTCACCTCGGGCTGCGCGCAGGTGGCGAGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: RERLAALPLAAH*SPRAARRWREG Trigger: ACCCTCTCGCCACCTGCGCGCAGCCCGAGGTGAGCAGTGAGCGGCGAGCGGGAGGGCAGCGAGGCGTTCGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS GCA 72 bp | TGCCCTCCCGCTCGCCGCTCACTGCTCACCTCGGGCTaGGCGCAGGTGGCGAGAGGGTCGCTAGCTGCACCC | + |
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Preference number: 6 (lower is better) Translates to: CPPARRSLLTSG*AQVARGSLAAP Trigger: GGGTGCAGCTAGCGACCCTCTCGCCACCTGCGCGCAGCCCGAGGTGAGCAGTGAGCGGCGAGCGGGAGGGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS CAA 90 bp | CGGGCGGTGGTCGCTCTGCTCACCCCAGGCCGGGGATCGGCGGCTTaGTGCGTAACGCGGGCTCGGGCAGCAGACTCGGGCGGTGGACTC | + |
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Preference number: 6 (lower is better) Translates to: RAVVALLTPGRGSAA*CVTRARAADSGGGL Trigger: GAGTCCACCGCCCGAGTCTGCTGCCCGAGCCCGCGTTACGCACAAAGCCGCCGATCCCCGGCCTGGGGTGAGCAGAGCGACCACCGCCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS GCA 72 bp | GCTCTGCTCACCCCAGGCCGGGGATCGGCGGCTTTGTaGGTAACGCGGGCTCGGGCAGCAGACTCGGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: ALLTPGRGSAAL*VTRARAADSGG Trigger: ACCGCCCGAGTCTGCTGCCCGAGCCCGCGTTACGCACAAAGCCGCCGATCCCCGGCCTGGGGTGAGCAGAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS CCA 72 bp | GTGCGTAACGCGGGCTCGGGCAGCAGACTCGGGCGGTaGACTCGGCCTAGCTCTCTCCCGGGTCTCTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: VRNAGSGSRLGR*TRPSSLPGLSG Trigger: CCCGGAGAGACCCGGGAGAGAGCTAGGCCGAGTCCACCGCCCGAGTCTGCTGCCCGAGCCCGCGTTACGCAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS CAA 72 bp | GTCGCTCTGCTCACCCCAGGCCGGGGATCGGCGGCTTaGTGCGTAACGCGGGCTCGGGCAGCAGACTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: VALLTPGRGSAA*CVTRARAADSG Trigger: GCCCGAGTCTGCTGCCCGAGCCCGCGTTACGCACAAAGCCGCCGATCCCCGGCCTGGGGTGAGCAGAGCGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS CCA 72 bp | TCTGGGAGCCGTAGCGCTTCTGCAGCGCGGCGCGCGTaGCCGTCTCGAAGACCTCGCGCACGCCTTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SGSRSASAARRA*PSRRPRARLPW Trigger: CCAAGGAAGGCGTGCGCGAGGTCTTCGAGACGGCCACGCGCGCCGCGCTGCAGAAGCGCTACGGCTCCCAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS GCA 72 bp | CGCGGCCGTCATCCGTGCGCACGGGTTCCTGCTTCATaGGGGCCAGCTCTGTGCGGACATGCTCGTCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RGRHPCARVPAS*GPALCGHARRC Trigger: GCAGCGACGAGCATGTCCGCACAGAGCTGGCCCGCATGAAGCAGGAACCCGTGCGCACGGATGACGGCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS GCA 72 bp | GCCATGGCGCGGCCGTCATCCGTGCGCACGGGTTCCTaGTTCATGCGGGCCAGCTCTGTGCGGACATGCTCG | + |
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Preference number: 6 (lower is better) Translates to: AMARPSSVRTGS*FMRASSVRTCS Trigger: CGAGCATGTCCGCACAGAGCTGGCCCGCATGAAGCAGGAACCCGTGCGCACGGATGACGGCCGCGCCATGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS GCA 72 bp | CTTGGATGCGCACGGCCATGGCGCGGCCGTCATCCGTaGGCACGGGTTCCTGCTTCATGCGGGCCAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LGCARPWRGRHP*ARVPASCGPAL Trigger: CAGAGCTGGCCCGCATGAAGCAGGAACCCGTGCGCACGGATGACGGCCGCGCCATGGCCGTGCGCATCCAAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS CCA 72 bp | ACTCGAGGTAGTCGTAGGCTTGGATGCGCACGGCCATaGCGCGGCCGTCATCCGTGCGCACGGGTTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TRGSRRLGCARP*RGRHPCARVPA Trigger: AGCAGGAACCCGTGCGCACGGATGACGGCCGCGCCATGGCCGTGCGCATCCAAGCCTACGACTACCTCGAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS TCA 72 bp | GCGACGGGCGCGGCCCTCATAGCACCTTGCAGCAGTTaGTGCAGCCGTTCTGGGAGCCGTAGCGCTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ATGAALIAPCSS*CSRSGSRSASA Trigger: TGCAGAAGCGCTACGGCTCCCAGAACGGCTGCATCAACTGCTGCAAGGTGCTATGAGGGCCGCGCCCGTCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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| CDS TCA 72 bp | CGGCCTAGCTCTCTCCCGGGTCTCTCCGGGCCTCGCTaGGCATACAAGACAACAGCTCCAACCAGACTGCGG | + |
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Preference number: 6 (lower is better) Translates to: RPSSLPGLSGPR*AYKTTAPTRLR Trigger: CCGCAGTCTGGTTGGAGCTGTTGTCTTGTATGCTCAGCGAGGCCCGGAGAGACCCGGGAGAGAGCTAGGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272233.6 |
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