RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RHOA (Homo sapiens)

Ensembl gene IDs: ENSG00000067560

Ensembl transcript IDs: ENST00000265538.3, ENST00000418115.6, ENST00000422781.6, ENST00000431929.2, ENST00000445425.6, ENST00000454011.7, ENST00000676712.2, ENST00000677684.1, ENST00000678200.1, ENST00000678921.2, ENST00000679208.1

Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTACCCCCTACCAAACATAAAATCTCTAATAAACATGGTATTCACTaGGAAGTAGAGGGAAGAGGTCAGAGGAGCCCTGGAAGGTTAAGG +
Preference number: 1 (lower is better)
Translates to: LPPTKHKISNKHGIH*EVEGRGQRSPGRLR
Trigger: CCTTAACCTTCCAGGGCTCCTCTGACCTCTTCCCTCTACTTCCCAGTGAATACCATGTTTATTAGAGATTTTATGTTTGGTAGGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR GCA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGTTCCCACGTCTAGCTTaGAGAGCAGCTCTCGTAGCC +
Preference number: 2 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRFPRLA*RAALVA
Trigger: GGCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAA...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422781.6
ENST00000454011.7
ENST00000678921.2
3UTR-3UTR CCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTGTGTCAAAAGGACCCTaGTGGGCCAGACGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCVSKGP*WARRVG
Trigger: TCCAACCCGTCTGGCCCACCAGGGTCCTTTTGACAC...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGTGTGAAGGTTCCTGCTaGGCTCCCCAAACCTCCAAA +
Preference number: 2 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRCEGSC*APQTSK
Trigger: TTTGGAGGTTTGGGGAGCCCAGCAGGAACCTTCACA...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR CCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGGCCTGGTGTGTCAGGTaGGAGTGCAGAGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLAWCVR*ECRGGL
Trigger: CAGCCCTCCTCTGCACTCCCACCTGACACACCAGGC...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR GCA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGAGCGCCAATCCTGTTTaGCATATCTCTGCCTTCTTC +
Preference number: 2 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRSANPV*HISAFF
Trigger: GAAGAAGGCAGAGATATGGCAAACAGGATTGGCGCT...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454011.7
ENST00000678921.2
3UTR-3UTR CCA 90 bp ATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCGAAAGCCTGGTGTGTCAGGTaGGAGTGCAGAGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: IPIYLAQLHGVLRYMGPKAWCVR*ECRGGL
Trigger: CAGCCCTCCTCTGCACTCCCACCTGACACACCAGGC...TTTCGGCCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp GAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCTGGTGTGTCAGGTaGGAGTGCAGAGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: ETNSYLLSPAPWGTEIHGAWCVR*ECRGGL
Trigger: CAGCCCTCCTCTGCACTCCCACCTGACACACCAGGC...CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTGTGGGCCAGACGGGTTaGACATCGTTAATAATCATA +
Preference number: 2 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCVGQTG*TSLIII
Trigger: TATGATTATTAACGATGTCCAACCCGTCTGGCCCAC...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp ATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCGAAAGTGTCAAAAGGACCCTaGTGGGCCAGACGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: IPIYLAQLHGVLRYMGPKVSKGP*WARRVG
Trigger: TCCAACCCGTCTGGCCCACCAGGGTCCTTTTGACAC...TTTCGGCCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp ACCAAAGTAATAGCTGGGGAAGGCAATCAAGAGTCTAACAGGCCCGGGCGTGGTGCCTCTAAAACAACCTaGCCTGTGAAGGTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: TKVIAGEGNQESNRPGRGASKTT*PVKVPA
Trigger: AGCAGGAACCTTCACAGGCCAGGTTGTTTTAGAGGC...ACCACGCCCGGGCCTGTTAGACTCTTGATTGCCTTCCCCAGCTATTACTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR TCA 90 bp AGGAGAGGGAAGGCATTAGGGCTTTCTATCTGGACTCCCAGCCTTCAAGATTTCTACGGAGTAAAGCCCTaGAGTGGTGACTCACCAGAG +
Preference number: 2 (lower is better)
Translates to: RRGKALGLSIWTPSLQDFYGVKP*SGDSPE
Trigger: CTCTGGTGAGTCACCACTTCAGGGCTTTACTCCGTA...GAAATCTTGAAGGCTGGGAGTCCAGATAGAAAGCCCTAATGCCTTCCCTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR TCA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATAGGCGGAGGTTGCAGTaGGCTGAGATTGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHRRRLQ*AEIAPL
Trigger: CAGTGGCGCAATCTCAGCTCACTGCAACCTCCGCCT...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR CCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGGTGTCAAAAGGACCCTaGTGGGCCAGACGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGVSKGP*WARRVG
Trigger: TCCAACCCGTCTGGCCCACCAGGGTCCTTTTGACAC...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp GAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGTGTCAAAAGGACCCTaGTGGGCCAGACGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: ETNSYLLSPAPWGTEIHGVSKGP*WARRVG
Trigger: TCCAACCCGTCTGGCCCACCAGGGTCCTTTTGACAC...CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCGCCTGGTGTGTCAGGTaGGAGTGCAGAGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAAWCVR*ECRGGL
Trigger: CAGCCCTCCTCTGCACTCCCACCTGACACACCAGGC...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp GTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATGCCTGGTGTGTCAGGTaGGAGTGCAGAGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: VMPSSKVSNCLRRETNSYAWCVR*ECRGGL
Trigger: CAGCCCTCCTCTGCACTCCCACCTGACACACCAGGC...ATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTGCCTGGTGTGTCAGGTaGGAGTGCAGAGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: KVSNCLRRETNSYLLSPAAWCVR*ECRGGL
Trigger: CAGCCCTCCTCTGCACTCCCACCTGACACACCAGGC...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR TCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACAGCACTTTGGGAGGCTaGGCTGGGCGGATCACGAGT +
Preference number: 2 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYSTLGG*AGRITS
Trigger: ACTCGTGATCCGCCCAGCTCAGCCTCCCAAAGTGCT...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR GCA 90 bp GAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGTTCCCACGTCTAGCTTaGAGAGCAGCTCTCGTAGCC +
Preference number: 2 (lower is better)
Translates to: ETNSYLLSPAPWGTEIHGFPRLA*RAALVA
Trigger: GGCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAA...CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422781.6
ENST00000454011.7
ENST00000678921.2
3UTR-3UTR TCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTACGGAGTAAAGCCCTaGAGTGGTGACTCACCAGAG +
Preference number: 2 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSYGVKP*SGDSPE
Trigger: CTCTGGTGAGTCACCACTTCAGGGCTTTACTCCGTA...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR TCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGTACGGAGTAAAGCCCTaGAGTGGTGACTCACCAGAG +
Preference number: 2 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGYGVKP*SGDSPE
Trigger: CTCTGGTGAGTCACCACTTCAGGGCTTTACTCCGTA...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR TCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCAGCTCCATGGGGTACTaGGATACATGGGGCCGAAAA +
Preference number: 2 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSSSMGY*DTWGRK
Trigger: TTTTCGGCCCCATGTATCTCAGTACCCCATGGAGCT...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR TCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACAAACAACCTGGCCTGTaGAGGTTCCTGCTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYKQPGL*RFLLGS
Trigger: GGAGCCCAGCAGGAACCTTCACAGGCCAGGTTGTTT...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR TCA 90 bp ATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCGAAAAGTGGGCAGATCACTTaGGGTAAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: IPIYLAQLHGVLRYMGPKSGQIT*GKEFKT
Trigger: GGTCTTGAACTCCTTACCTCAAGTGATCTGCCCACT...TTTCGGCCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR GCA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATTTCCCACGTCTAGCTTaGAGAGCAGCTCTCGTAGCC +
Preference number: 2 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHFPRLA*RAALVA
Trigger: GGCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAA...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422781.6
ENST00000454011.7
ENST00000678921.2
3UTR-3UTR CCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACGTGTCAAAAGGACCCTaGTGGGCCAGACGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYVSKGP*WARRVG
Trigger: TCCAACCCGTCTGGCCCACCAGGGTCCTTTTGACAC...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp GTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATGTGTCAAAAGGACCCTaGTGGGCCAGACGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: VMPSSKVSNCLRRETNSYVSKGP*WARRVG
Trigger: TCCAACCCGTCTGGCCCACCAGGGTCCTTTTGACAC...ATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCGTGTCAAAAGGACCCTaGTGGGCCAGACGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAVSKGP*WARRVG
Trigger: TCCAACCCGTCTGGCCCACCAGGGTCCTTTTGACAC...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR TCA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATTTAAACCTTGGAGGCTaGGGTTGCAGCCGAGATAGC +
Preference number: 2 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHLNLGG*GCSRDS
Trigger: GCTATCTCGGCTGCAACCTCAGCCTCCAAGGTTTAA...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR CCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACATTAGCCGGTCATGGTaGAGGGTGCCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYISRSW*RVPVVP
Trigger: TGGGACTACAGGCACCCTCCACCATGACCGGCTAAT...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR CCA 90 bp ATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCGAAACACTGCATTCCAGCCTaGGTGACAAAAGCAAAACTG +
Preference number: 2 (lower is better)
Translates to: IPIYLAQLHGVLRYMGPKHCIPA*VTKAKL
Trigger: CAGTTTTGCTTTTGTCACCCAGGCTGGAATGCAGTG...TTTCGGCCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR TCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTTACGGAGTAAAGCCCTaGAGTGGTGACTCACCAGAG +
Preference number: 2 (lower is better)
Translates to: KVSNCLRRETNSYLLSPAYGVKP*SGDSPE
Trigger: CTCTGGTGAGTCACCACTTCAGGGCTTTACTCCGTA...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR TCA 90 bp GTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTACGGAGTAAAGCCCTaGAGTGGTGACTCACCAGAG +
Preference number: 2 (lower is better)
Translates to: VMPSSKVSNCLRRETNSYYGVKP*SGDSPE
Trigger: CTCTGGTGAGTCACCACTTCAGGGCTTTACTCCGTA...ATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR TCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACAGCTCCATGGGGTACTaGGATACATGGGGCCGAAAA +
Preference number: 2 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYSSMGY*DTWGRK
Trigger: TTTTCGGCCCCATGTATCTCAGTACCCCATGGAGCT...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR TCA 90 bp ATTACTCAAGCTACCAATCCAGGACTAAATGCCCTGAAGGAAATAAAGCCTACCAGCTCCATGGGGTACTaGGATACATGGGGCCGAAAA +
Preference number: 2 (lower is better)
Translates to: ITQATNPGLNALKEIKPTSSMGY*DTWGRK
Trigger: TTTTCGGCCCCATGTATCTCAGTACCCCATGGAGCT...GGTAGGCTTTATTTCCTTCAGGGCATTTAGTCCTGGATTGGTAGCTTGAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR CCA 90 bp AATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTGTGGGCCAGACGGGTTaGACATCGTTAATAATCATA +
Preference number: 2 (lower is better)
Translates to: NCLRRETNSYLLSPAPWGVGQTG*TSLIII
Trigger: TATGATTATTAACGATGTCCAACCCGTCTGGCCCAC...ACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp ATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCGAAAGTGGGCCAGACGGGTTaGACATCGTTAATAATCATA +
Preference number: 2 (lower is better)
Translates to: IPIYLAQLHGVLRYMGPKVGQTG*TSLIII
Trigger: TATGATTATTAACGATGTCCAACCCGTCTGGCCCAC...TTTCGGCCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACCTTAGCCCAGCTCCATaGGGTACTGAGATACATGGG +
Preference number: 2 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYLSPAP*GTEIHG
Trigger: CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAG...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR TCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACGGAACCTGGATACAGTaGGGAGAAAAGAGCACTGTG +
Preference number: 2 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYGTWIQ*GEKSTV
Trigger: CACAGTGCTCTTTTCTCCTCACTGTATCCAGGTTCC...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR TCA 90 bp AATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTCTTAGGGATCTTCTGTaGAGATCCCAATTAATGAGG +
Preference number: 2 (lower is better)
Translates to: NCLRRETNSYLLSPAPWGLRDLL*RSQLMR
Trigger: CCTCATTAATTGGGATCTTCACAGAAGATCCCTAAG...ACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR GCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCCCACCCCAGAGCTATaGCAACAAAATCTGTTACGG +
Preference number: 2 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAPTPEL*QQNLLR
Trigger: CCGTAACAGATTTTGTTGGCATAGCTCTGGGGTGGG...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR GCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCCACCCCAGAGCTATaGCAACAAAATCTGTTACGG +
Preference number: 2 (lower is better)
Translates to: KVSNCLRRETNSYLLSPAPTPEL*QQNLLR
Trigger: CCGTAACAGATTTTGTTGGCATAGCTCTGGGGTGGG...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCGTGGGCCAGACGGGTTaGACATCGTTAATAATCATA +
Preference number: 2 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSVGQTG*TSLIII
Trigger: TATGATTATTAACGATGTCCAACCCGTCTGGCCCAC...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCCCAAACCTCCAAACTTaGGGCCCTAGTTCAAGAATA +
Preference number: 2 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSPNLQT*GPSSRI
Trigger: TATTCTTGAACTAGGGCCCCAAGTTTGGAGGTTTGG...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR GCA 90 bp GTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATAGCGCCAATCCTGTTTaGCATATCTCTGCCTTCTTC +
Preference number: 2 (lower is better)
Translates to: VMPSSKVSNCLRRETNSYSANPV*HISAFF
Trigger: GAAGAAGGCAGAGATATGGCAAACAGGATTGGCGCT...ATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454011.7
ENST00000678921.2
3UTR-3UTR TCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACATCTCACAGGACTGGTaGACTATCTTAGGGATCTTC +
Preference number: 2 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYISQDW*TILGIF
Trigger: GAAGATCCCTAAGATAGTTCACCAGTCCTGTGAGAT...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR CCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCGTGGGCCAGACGGGTTaGACATCGTTAATAATCATA +
Preference number: 2 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAVGQTG*TSLIII
Trigger: TATGATTATTAACGATGTCCAACCCGTCTGGCCCAC...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR GCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTCCAAAGTGTCTAATTaGCTCAGGCGTGAAACCAAT +
Preference number: 2 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYSKVSN*LRRETN
Trigger: ATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGA...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTTACCAAAGTAATAGCTaGGGAAGGCAATCAAGAGTC +
Preference number: 2 (lower is better)
Translates to: KVSNCLRRETNSYLLSPAYQSNS*GRQSRV
Trigger: GACTCTTGATTGCCTTCCCCAGCTATTACTTTGGTA...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR CCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACAAAAGTTTAGTCAGCTaGAGAGAAGAGAGACTGAGT +
Preference number: 2 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYKSLVS*REERLS
Trigger: ACTCAGTCTCTCTTCTCTCCAGCTGACTAAACTTTT...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CAA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTGGTGGGCCAGACGGGTaGGACATCGTTAATAATCAT +
Preference number: 3 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCGGPDG*DIVNNH
Trigger: ATGATTATTAACGATGTCCAACCCGTCTGGCCCACC...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CAA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATCTTCCCACGTCTAGCTaGCAGAGCAGCTCTCGTAGC +
Preference number: 3 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHLPTSS*QSSSRS
Trigger: GCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAAG...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422781.6
ENST00000454011.7
ENST00000678921.2
3UTR-3UTR CAA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACCTTCCCACGTCTAGCTaGCAGAGCAGCTCTCGTAGC +
Preference number: 3 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYLPTSS*QSSSRS
Trigger: GCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAAG...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422781.6
ENST00000454011.7
ENST00000678921.2
3UTR-3UTR CAA 90 bp AATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTGGTGGGCCAGACGGGTaGGACATCGTTAATAATCAT +
Preference number: 3 (lower is better)
Translates to: NCLRRETNSYLLSPAPWGGGPDG*DIVNNH
Trigger: ATGATTATTAACGATGTCCAACCCGTCTGGCCCACC...ACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CAA 90 bp GAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGTGTAATCCCTGCACTTaGGGAGGCAAAAGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: ETNSYLLSPAPWGTEIHGCNPCT*GGKSGQ
Trigger: CTGCCCACTTTTGCCTCCCAAAGTGCAGGGATTACA...CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR TCA 72 bp CTCACAGGACTGGTGAACTATCTTAGGGATCTTCTGTaGAGATCCCAATTAATGAGGGTCAGAGGGCCACAG +
Preference number: 3 (lower is better)
Translates to: LTGLVNYLRDLL*RSQLMRVRGPQ
Trigger: CTGTGGCCCTCTGACCCTCATTAATTGGGATCTTCACAGAAGATCCCTAAGATAGTTCACCAGTCCTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR CAA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGGGTGGGCCAGACGGGTaGGACATCGTTAATAATCAT +
Preference number: 3 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGGGPDG*DIVNNH
Trigger: ATGATTATTAACGATGTCCAACCCGTCTGGCCCACC...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
3UTR-3UTR CAA 90 bp GAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGAAGCGCCAATCCTGTTaGCCATATCTCTGCCTTCTT +
Preference number: 3 (lower is better)
Translates to: ETNSYLLSPAPWGTEIHGKRQSC*PYLCLL
Trigger: AAGAAGGCAGAGATATGGCAAACAGGATTGGCGCTT...CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454011.7
ENST00000678921.2
3UTR-3UTR CAA 90 bp AGGAGAGGGAAGGCATTAGGGCTTTCTATCTGGACTCCCAGCCTTCAAGATTTCGCCACTAATTTATCTTaGGCCTCACATGTACCAAAG +
Preference number: 3 (lower is better)
Translates to: RRGKALGLSIWTPSLQDFATNLS*ASHVPK
Trigger: CTTTGGTACATGTGAGGCCAAAGATAAATTAGTGGC...GAAATCTTGAAGGCTGGGAGTCCAGATAGAAAGCCCTAATGCCTTCCCTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
3UTR-3UTR CAA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACAAGCGCCAATCCTGTTaGCCATATCTCTGCCTTCTT +
Preference number: 3 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYKRQSC*PYLCLL
Trigger: AAGAAGGCAGAGATATGGCAAACAGGATTGGCGCTT...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454011.7
ENST00000678921.2
CDS-3UTR CCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTTGCCGGCCACGGTGCTaGGCGCGCTGGGCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCCRPRC*ARWAAS
Trigger: ACTCGCTGCCCAGCGCGCCCAGCACCGTGGCCGGCA...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS-3UTR CCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTCGGTGCTGGGCGCGCTaGGCAGCGAGTTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCRCWAR*AASSCG
Trigger: CCCGCAAGAACTCGCTGCCCAGCGCGCCCAGCACCG...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS-3UTR GCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTTGGGCAGCGAGTTCTTaGGGGAGTGGGAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCWAASS*GSGRRR
Trigger: CCTGCGCCTCCCACTCCCGCAAGAACTCGCTGCCCA...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS-3UTR CCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTGCCTGGTGTGTCAGGTaGGAGTGCAGAGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCAWCVR*ECRGGL
Trigger: CAGCCCTCCTCTGCACTCCCACCTGACACACCAGGC...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGGGCAGGAGGACAACTTaGGCCCAGGAGTACAAGATC +
Preference number: 4 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRGRRTT*AQEYKI
Trigger: GATCTTGTACTCCTGGGCTCAAGTTGTCCTCCTGCC...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445425.6
CDS-3UTR TCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTACGAAGGCGGGTAGCTaGAGACCAGACCGTGGACTA +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCTKAGS*RPDRGL
Trigger: TAGTCCACGGTCTGGTCTTCAGCTACCCGCCTTCGT...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678921.2
CDS-3UTR TCA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGGGAGAGAAGAGAGACTaGGTGCCACCCATGAGAACT +
Preference number: 4 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRGEKRD*VPPMRT
Trigger: AGTTCTCATGGGTGGCACTCAGTCTCTCTTCTCTCC...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTAGCCTGGCGACACAGTaGGGCTCCTGCTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCSLATQ*GSCFIL
Trigger: CAAGATGAAGCAGGAGCCTCACTGTGTCGCCAGGCT...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422781.6
CDS-3UTR CCA 90 bp AAGAAATTCCTTGAATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCGAGTTCTTGCGGGAGTaGGAGGCGCAGGACATGCGC +
Preference number: 4 (lower is better)
Translates to: KKFLELAPGVSGGSAEEGEFLRE*EAQDMR
Trigger: GCGCATGTCCTGCGCCTCCCACTCCCGCAAGAACTC...GCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAATTCAAGGAATTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS-3UTR CCA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGCTGAAGACCAGACCGTaGACTAACGAGAGAACCGAC +
Preference number: 4 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRLKTRP*TNERTD
Trigger: GTCGGTTCTCTCGTTAGTCCACGGTCTGGTCTTCAG...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000676712.2
ENST00000678921.2
CDS-3UTR CCA 90 bp AAGAAATTCCTTGAATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCGCCTGGTGTGTCAGGTaGGAGTGCAGAGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KKFLELAPGVSGGSAEEGAWCVR*ECRGGL
Trigger: CAGCCCTCCTCTGCACTCCCACCTGACACACCAGGC...GCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAATTCAAGGAATTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGCTTAGCCCAGCTCCATaGGGTACTGAGATACATGGG +
Preference number: 4 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRLSPAP*GTEIHG
Trigger: CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAG...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCCCTGCCCGGCGCCGCTaGGAGAGGAAGCTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSPARRR*ERKLRG
Trigger: TCCCCGGAGCTTCCTCTCCCAGCGGCGCCGGGCAGG...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679208.1
CDS-3UTR GCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGGGTCTGGGCAGGCCTTaGAGGCTCTGCCGGCCACGG +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGGLGRP*RLCRPR
Trigger: CCGTGGCCGGCAGAGCCTGCAAGGCCTGCCCAGACC...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS-3UTR TCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTTACGGAGTAAAGCCCTaGAGTGGTGACTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCYGVKP*SGDSPE
Trigger: CTCTGGTGAGTCACCACTTCAGGGCTTTACTCCGTA...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTAGCTCCATGGGGTACTaGGATACATGGGGCCGAAAA +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCSSMGY*DTWGRK
Trigger: TTTTCGGCCCCATGTATCTCAGTACCCCATGGAGCT...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp TGCTTCTCCTCCAGTGAGGAAGCCCTGCCATTAGGCCAGCTGGTTTCTGAGAGGTTAAACCTTGGAGGCTaGGGTTGCAGCCGAGATAGC +
Preference number: 4 (lower is better)
Translates to: CFSSSEEALPLGQLVSERLNLGG*GCSRDS
Trigger: GCTATCTCGGCTGCAACCTCAGCCTCCAAGGTTTAA...CCTCTCAGAAACCAGCTGGCCTAATGGCAGGGCTTCCTCACTGGAGGAGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR GCA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATAGGCCTTGCAGGCTCTaGCGGCCACGGTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHRPCRL*RPRCWA
Trigger: CGCCCAGCACCGTGGCCGGCAGAGCCTGCAAGGCCT...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS-3UTR GCA 90 bp AAGAAATTCCTTGAATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCCTCGGCCTCCCAAAGTaGTGGGATACAGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: KKFLELAPGVSGGSAEEGLGLPK*WDTGMS
Trigger: GCTCATGCCTGTATCCCAGCACTTTGGGAGGCCGAG...GCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAATTCAAGGAATTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp ATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCGAAAGGCGGAGTCCTGGTCTaGGCAGGCCTTGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: IPIYLAQLHGVLRYMGPKGGVLV*AGLAGS
Trigger: AGAGCCTGCAAGGCCTGCCCAGACCAGGACTCCGCC...TTTCGGCCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS-3UTR CCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCAGCCATTGCCCGGGTaGGGCGAGGGCCAGTCATGG +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGQPLPG*GEGQSW
Trigger: CCATGACTGGCCCTCGCCCCACCCGGGCAATGGCTG...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS-3UTR TCA 90 bp TCTCAATGCTTCTCCTCCAGTGAGGAAGCCCTGCCATTAGGCCAGCTGGTTTCTATGCTTCTCCTCCAGTaGGGAAGCCCTGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: SQCFSSSEEALPLGQLVSMLLLQ*GSPAIR
Trigger: CCTAATGGCAGGGCTTCCTCACTGGAGGAGAAGCAT...AGAAACCAGCTGGCCTAATGGCAGGGCTTCCTCACTGGAGGAGAAGCATTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR GCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGGTTGAGCCAAGATCGTaGCACAGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLVEPRS*HSTPAW
Trigger: CCAGGCTGGAGTGCTGTGGCACGATCTTGGCTCAAC...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422781.6
ENST00000678921.2
CDS-3UTR CCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTTATAACATCGGTATCTaGGTAGGAGAGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCYNIGI*VGEGPQ
Trigger: CTGAGGCCCCTCTCCTACCCAGATACCGATGTTATA...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGGTGGGCCAGACGGGTTaGACATCGTTAATAATCATA +
Preference number: 4 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRVGQTG*TSLIII
Trigger: TATGATTATTAACGATGTCCAACCCGTCTGGCCCAC...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp TGCTTCTCCTCCAGTGAGGAAGCCCTGCCATTAGGCCAGCTGGTTTCTGAGAGGGCCTCTAAAACAACCTaGCCTGTGAAGGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CFSSSEEALPLGQLVSERASKTT*PVKVPA
Trigger: AGCAGGAACCTTCACAGGCCAGGTTGTTTTAGAGGC...CCTCTCAGAAACCAGCTGGCCTAATGGCAGGGCTTCCTCACTGGAGGAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp ACCAAAGTAATAGCTGGGGAAGGCAATCAAGAGTCTAACAGGCCCGGGCGTGGTATTAGCCGGTCATGGTaGAGGGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: TKVIAGEGNQESNRPGRGISRSW*RVPVVP
Trigger: TGGGACTACAGGCACCCTCCACCATGACCGGCTAAT...ACCACGCCCGGGCCTGTTAGACTCTTGATTGCCTTCCCCAGCTATTACTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR TCA 90 bp TCTCAATGCTTCTCCTCCAGTGAGGAAGCCCTGCCATTAGGCCAGCTGGTTTCTAGCTCCATGGGGTACTaGGATACATGGGGCCGAAAA +
Preference number: 4 (lower is better)
Translates to: SQCFSSSEEALPLGQLVSSSMGY*DTWGRK
Trigger: TTTTCGGCCCCATGTATCTCAGTACCCCATGGAGCT...AGAAACCAGCTGGCCTAATGGCAGGGCTTCCTCACTGGAGGAGAAGCATTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR TCA 90 bp AAGAAATTCCTTGAATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCGGAGAGAAGAGAGACTaGGTGCCACCCATGAGAACT +
Preference number: 4 (lower is better)
Translates to: KKFLELAPGVSGGSAEEGGEKRD*VPPMRT
Trigger: AGTTCTCATGGGTGGCACTCAGTCTCTCTTCTCTCC...GCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAATTCAAGGAATTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp TCTCAATGCTTCTCCTCCAGTGAGGAAGCCCTGCCATTAGGCCAGCTGGTTTCTGGAGAGAAGAGAGACTaGGTGCCACCCATGAGAACT +
Preference number: 4 (lower is better)
Translates to: SQCFSSSEEALPLGQLVSGEKRD*VPPMRT
Trigger: AGTTCTCATGGGTGGCACTCAGTCTCTCTTCTCTCC...AGAAACCAGCTGGCCTAATGGCAGGGCTTCCTCACTGGAGGAGAAGCATTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR TCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGGCCAGCTGGTTTCTaGGAGGCCAAGATGCCACAT +
Preference number: 4 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLRPAGF*EAKMPH
Trigger: ATGTGGCATCTTGGCCTCTCAGAAACCAGCTGGCCT...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR GCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGTTCCCACGTCTAGCTTaGAGAGCAGCTCTCGTAGCC +
Preference number: 4 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLFPRLA*RAALVA
Trigger: GGCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAA...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGTCCAAAGTGTCTAATTaGCTCAGGCGTGAAACCAAT +
Preference number: 4 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRSKVSN*LRRETN
Trigger: ATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGA...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCGTCATGGCGGAGTCCTaGTCTGGGCAGGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSVMAES*SGQALQ
Trigger: CTGCAAGGCCTGCCCAGACCAGGACTCCGCCATGAC...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS-3UTR CCA 90 bp GTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATGGCGAGGGCCAGTCATaGCGGAGTCCTGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VMPSSKVSNCLRRETNSYGEGQS*RSPGLG
Trigger: GCCCAGACCAGGACTCCGCCATGACTGGCCCTCGCC...ATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS-3UTR CCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTAGTTCTCAAACACTGTaGGCACATACACCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCSSQTL*AHTPLG
Trigger: TCCCAGAGGTGTATGTGCCCACAGTGTTTGAGAACT...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGGCCTGGTGTGTCAGGTaGGAGTGCAGAGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGAWCVR*ECRGGL
Trigger: CAGCCCTCCTCTGCACTCCCACCTGACACACCAGGC...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp ACCAAAGTAATAGCTGGGGAAGGCAATCAAGAGTCTAACAGGCCCGGGCGTGGTCTTAGCCCAGCTCCATaGGGTACTGAGATACATGGG +
Preference number: 4 (lower is better)
Translates to: TKVIAGEGNQESNRPGRGLSPAP*GTEIHG
Trigger: CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAG...ACCACGCCCGGGCCTGTTAGACTCTTGATTGCCTTCCCCAGCTATTACTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAACTGGTGGCTCCTCTaGGAGGGAACCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLNWWLL*EGTWIQ
Trigger: CTGTATCCAGGTTCCCTCCCAGAGGAGCCACCAGTT...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp ATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCGAAAACGAAGGCGGGTAGCTaGAGACCAGACCGTGGACTA +
Preference number: 4 (lower is better)
Translates to: IPIYLAQLHGVLRYMGPKTKAGS*RPDRGL
Trigger: TAGTCCACGGTCTGGTCTTCAGCTACCCGCCTTCGT...TTTCGGCCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678921.2
CDS-3UTR TCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGTACGGAGTAAAGCCCTaGAGTGGTGACTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLYGVKP*SGDSPE
Trigger: CTCTGGTGAGTCACCACTTCAGGGCTTTACTCCGTA...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGCTCCATGGGGTACTaGGATACATGGGGCCGAAAA +
Preference number: 4 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLSSMGY*DTWGRK
Trigger: TTTTCGGCCCCATGTATCTCAGTACCCCATGGAGCT...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTATGCTTAAGTCCAGGTaGGACAGGTTATGCCATCTT +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCMLKSR*DRLCHL
Trigger: AAGATGGCATAACCTGTCTCACCTGGACTTAAGCAT...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp ACCAAAGTAATAGCTGGGGAAGGCAATCAAGAGTCTAACAGGCCCGGGCGTGGTAGTGGGCAGATCACTTaGGGTAAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: TKVIAGEGNQESNRPGRGSGQIT*GKEFKT
Trigger: GGTCTTGAACTCCTTACCTCAAGTGATCTGCCCACT...ACCACGCCCGGGCCTGTTAGACTCTTGATTGCCTTCCCCAGCTATTACTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR GCA 90 bp AAGAAATTCCTTGAATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCCCCACCCCAGAGCTATaGCAACAAAATCTGTTACGG +
Preference number: 4 (lower is better)
Translates to: KKFLELAPGVSGGSAEEGPTPEL*QQNLLR
Trigger: CCGTAACAGATTTTGTTGGCATAGCTCTGGGGTGGG...GCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAATTCAAGGAATTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGCCAGTTTCTTCCGGATaGCAGCCATTGCTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLPVSSG*QPLLRQ
Trigger: TTGCCTGAGCAATGGCTGCCATCCGGAAGAAACTGG...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000454011.7
ENST00000676712.2
ENST00000678921.2
CDS-3UTR CCA 90 bp AAGAAATTCCTTGAATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTATAACATCGGTATCTaGGTAGGAGAGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KKFLELAPGVSGGSAEEGYNIGI*VGEGPQ
Trigger: CTGAGGCCCCTCTCCTACCCAGATACCGATGTTATA...GCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAATTCAAGGAATTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGAAAAGTTTAGTCAGCTaGAGAGAAGAGAGACTGAGT +
Preference number: 4 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRKSLVS*REERLS
Trigger: ACTCAGTCTCTCTTCTCTCCAGCTGACTAAACTTTT...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTCCAAACCTCCAAACTTaGGGCCCTAGTTCAAGAATA +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCPNLQT*GPSSRI
Trigger: TATTCTTGAACTAGGGCCCCAAGTTTGGAGGTTTGG...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp TCTCAATGCTTCTCCTCCAGTGAGGAAGCCCTGCCATTAGGCCAGCTGGTTTCTGTAATCCCTGCACTTTaGGAGGCAAAAGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SQCFSSSEEALPLGQLVSVIPAL*EAKVGR
Trigger: TCTGCCCACTTTTGCCTCCCAAAGTGCAGGGATTAC...AGAAACCAGCTGGCCTAATGGCAGGGCTTCCTCACTGGAGGAGAAGCATTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR TCA 90 bp ATGAAATGGTTCATTCTCAGGCCAGCAGTCCTTATGGGCATAGCACTACCTCATACGAAGGCGGGTAGCTaGAGACCAGACCGTGGACTA +
Preference number: 4 (lower is better)
Translates to: MKWFILRPAVLMGIALPHTKAGS*RPDRGL
Trigger: TAGTCCACGGTCTGGTCTTCAGCTACCCGCCTTCGT...ATGAGGTAGTGCTATGCCCATAAGGACTGCTGGCCTGAGAATGAACCATTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR TCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTTCAGACAGAGAAACCTaGGTAAGAGAACTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCSDRET*VRELRL
Trigger: CAACCTAAGTTCTCTTACTCAGGTTTCTCTGTCTGA...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR TCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTAATAAAGCCTACCCTTaGCATTCAGACAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCNKAYP*HSDRET
Trigger: GGTTTCTCTGTCTGAATGTCAAGGGTAGGCTTTATT...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR TCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCTGGTCTCGAACTCCTaGCCAAGTGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGLVSNS*PSDLPT
Trigger: GGTGGGCAGATCACTTGGTCAGGAGTTCGAGACCAG...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR GCA 90 bp TCTCAATGCTTCTCCTCCAGTGAGGAAGCCCTGCCATTAGGCCAGCTGGTTTCTAGCGCCAATCCTGTTTaGCATATCTCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SQCFSSSEEALPLGQLVSSANPV*HISAFF
Trigger: GAAGAAGGCAGAGATATGGCAAACAGGATTGGCGCT...AGAAACCAGCTGGCCTAATGGCAGGGCTTCCTCACTGGAGGAGAAGCATTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR GCA 90 bp AGGAGAGGGAAGGCATTAGGGCTTTCTATCTGGACTCCCAGCCTTCAAGATTTCATGATCTCAGCTGACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RRGKALGLSIWTPSLQDFMISAD*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTCAGCTGAGATCAT...GAAATCTTGAAGGCTGGGAGTCCAGATAGAAAGCCCTAATGCCTTCCCTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp TCTCAATGCTTCTCCTCCAGTGAGGAAGCCCTGCCATTAGGCCAGCTGGTTTCTAGTTCTCAAACACTGTaGGCACATACACCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SQCFSSSEEALPLGQLVSSSQTL*AHTPLG
Trigger: TCCCAGAGGTGTATGTGCCCACAGTGTTTGAGAACT...AGAAACCAGCTGGCCTAATGGCAGGGCTTCCTCACTGGAGGAGAAGCATTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGTATAACATCGGTATCTaGGTAGGAGAGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLYNIGI*VGEGPQ
Trigger: CTGAGGCCCCTCTCCTACCCAGATACCGATGTTATA...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCGTGTCAAAAGGACCCTaGTGGGCCAGACGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSVSKGP*WARRVG
Trigger: TCCAACCCGTCTGGCCCACCAGGGTCCTTTTGACAC...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACGCCTGGTGTGTCAGGTaGGAGTGCAGAGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYAWCVR*ECRGGL
Trigger: CAGCCCTCCTCTGCACTCCCACCTGACACACCAGGC...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGCCAGTTTCTTCCGGATaGCAGCCATTGCCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLPVSSG*QPLPKC
Trigger: ACACTTTGGCAATGGCTGCCATCCGGAAGAAACTGG...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679208.1
CDS-3UTR TCA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATACGAAGGCGGGTAGCTaGAGACCAGACCGTGGACTA +
Preference number: 4 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHTKAGS*RPDRGL
Trigger: TAGTCCACGGTCTGGTCTTCAGCTACCCGCCTTCGT...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678921.2
CDS-3UTR TCA 90 bp TCTCAATGCTTCTCCTCCAGTGAGGAAGCCCTGCCATTAGGCCAGCTGGTTTCTATCTCACAGGACTGGTaGACTATCTTAGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: SQCFSSSEEALPLGQLVSISQDW*TILGIF
Trigger: GAAGATCCCTAAGATAGTTCACCAGTCCTGTGAGAT...AGAAACCAGCTGGCCTAATGGCAGGGCTTCCTCACTGGAGGAGAAGCATTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR TCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTAGCACTTTGGGAGGCTaGGCTGGGCGGATCACGAGT +
Preference number: 4 (lower is better)
Translates to: KVSNCLRRETNSYLLSPASTLGG*AGRITS
Trigger: ACTCGTGATCCGCCCAGCTCAGCCTCCCAAAGTGCT...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR GCA 90 bp AAGAAATTCCTTGAATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCAAAGCCAACTCTACCTaGTTTCCATCCACCTCGATA +
Preference number: 4 (lower is better)
Translates to: KKFLELAPGVSGGSAEEGKANST*FPSTSI
Trigger: TATCGAGGTGGATGGAAAGCAGGTAGAGTTGGCTTT...GCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAATTCAAGGAATTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGCGCCAATCCTGTTTaGCATATCTCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLSANPV*HISAFF
Trigger: GAAGAAGGCAGAGATATGGCAAACAGGATTGGCGCT...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGTTCCCACGTCTAGCTTaGAGAGCAGCTCTCGTAGCC +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGFPRLA*RAALVA
Trigger: GGCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAA...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp AAGAAATTCCTTGAATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCGTGGGCCAGACGGGTTaGACATCGTTAATAATCATA +
Preference number: 4 (lower is better)
Translates to: KKFLELAPGVSGGSAEEGVGQTG*TSLIII
Trigger: TATGATTATTAACGATGTCCAACCCGTCTGGCCCAC...GCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAATTCAAGGAATTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGAACTGGTGGCTCCTCTaGGAGGGAACCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGNWWLL*EGTWIQ
Trigger: CTGTATCCAGGTTCCCTCCCAGAGGAGCCACCAGTT...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp GAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGAACTGGTGGCTCCTCTaGGAGGGAACCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: ETNSYLLSPAPWGTEIHGNWWLL*EGTWIQ
Trigger: CTGTATCCAGGTTCCCTCCCAGAGGAGCCACCAGTT...CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTAAAAGTTTAGTCAGCTaGAGAGAAGAGAGACTGAGT +
Preference number: 4 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCKSLVS*REERLS
Trigger: ACTCAGTCTCTCTTCTCTCCAGCTGACTAAACTTTT...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCAGTTTCTTCCGGATaGCAGCCATTGCCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: KVSNCLRRETNSYLLSPAPVSSG*QPLPGW
Trigger: CCACCCGGGCAATGGCTGCCATCCGGAAGAAACTGG...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS-3UTR TCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACACGAAGGCGGGTAGCTaGAGACCAGACCGTGGACTA +
Preference number: 4 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYTKAGS*RPDRGL
Trigger: TAGTCCACGGTCTGGTCTTCAGCTACCCGCCTTCGT...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678921.2
CDS-3UTR TCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGATGCTTAAGTCCAGGTaGGACAGGTTATGCCATCTT +
Preference number: 4 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLMLKSR*DRLCHL
Trigger: AAGATGGCATAACCTGTCTCACCTGGACTTAAGCAT...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp ATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCGAAAGGAACCTGGATACAGTaGGGAGAAAAGAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: IPIYLAQLHGVLRYMGPKGTWIQ*GEKSTV
Trigger: CACAGTGCTCTTTTCTCCTCACTGTATCCAGGTTCC...TTTCGGCCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp AATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTGGAACCTGGATACAGTaGGGAGAAAAGAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: NCLRRETNSYLLSPAPWGGTWIQ*GEKSTV
Trigger: CACAGTGCTCTTTTCTCCTCACTGTATCCAGGTTCC...ACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGGGAGAGAAGAGAGACTaGGTGCCACCCATGAGAACT +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGGEKRD*VPPMRT
Trigger: AGTTCTCATGGGTGGCACTCAGTCTCTCTTCTCTCC...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp GAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGGAGAGAAGAGAGACTaGGTGCCACCCATGAGAACT +
Preference number: 4 (lower is better)
Translates to: ETNSYLLSPAPWGTEIHGGEKRD*VPPMRT
Trigger: AGTTCTCATGGGTGGCACTCAGTCTCTCTTCTCTCC...CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp ATTACTCAAGCTACCAATCCAGGACTAAATGCCCTGAAGGAAATAAAGCCTACCAAACAACCTGGCCTGTaGAGGTTCCTGCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ITQATNPGLNALKEIKPTKQPGL*RFLLGS
Trigger: GGAGCCCAGCAGGAACCTTCACAGGCCAGGTTGTTT...GGTAGGCTTTATTTCCTTCAGGGCATTTAGTCCTGGATTGGTAGCTTGAGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR GCA 90 bp AATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTCCCACCCCAGAGCTATaGCAACAAAATCTGTTACGG +
Preference number: 4 (lower is better)
Translates to: NCLRRETNSYLLSPAPWGPTPEL*QQNLLR
Trigger: CCGTAACAGATTTTGTTGGCATAGCTCTGGGGTGGG...ACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp AAGAAATTCCTTGAATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTCCAAAGTGTCTAATTaGCTCAGGCGTGAAACCAAT +
Preference number: 4 (lower is better)
Translates to: KKFLELAPGVSGGSAEEGSKVSN*LRRETN
Trigger: ATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGA...GCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAATTCAAGGAATTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCGTTGAGCCAAGATCGTaGCACAGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAVEPRS*HSTPAW
Trigger: CCAGGCTGGAGTGCTGTGGCACGATCTTGGCTCAAC...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422781.6
ENST00000678921.2
CDS-3UTR GCA 90 bp ACCAAAGTAATAGCTGGGGAAGGCAATCAAGAGTCTAACAGGCCCGGGCGTGGTCAATCCAGGACTAAATaGCCTGAAGGAAATAAAGCC +
Preference number: 4 (lower is better)
Translates to: TKVIAGEGNQESNRPGRGQSRTK*PEGNKA
Trigger: GGCTTTATTTCCTTCAGGGCATTTAGTCCTGGATTG...ACCACGCCCGGGCCTGTTAGACTCTTGATTGCCTTCCCCAGCTATTACTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp GAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGCCAGTTTCTTCCGGATaGCAGCCATTGCTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: ETNSYLLSPAPWGTEIHGPVSSG*QPLLRQ
Trigger: TTGCCTGAGCAATGGCTGCCATCCGGAAGAAACTGG...CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000454011.7
ENST00000676712.2
ENST00000678921.2
CDS-3UTR CCA 90 bp ATGAAATGGTTCATTCTCAGGCCAGCAGTCCTTATGGGCATAGCACTACCTCATCCAGTTTCTTCCGGATaGCAGCCATTGCTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: MKWFILRPAVLMGIALPHPVSSG*QPLLRQ
Trigger: TTGCCTGAGCAATGGCTGCCATCCGGAAGAAACTGG...ATGAGGTAGTGCTATGCCCATAAGGACTGCTGGCCTGAGAATGAACCATTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGGTGGGCCAGACGGGTTaGACATCGTTAATAATCATA +
Preference number: 4 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLVGQTG*TSLIII
Trigger: TATGATTATTAACGATGTCCAACCCGTCTGGCCCAC...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCTTAGCCCAGCTCCATaGGGTACTGAGATACATGGG +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGLSPAP*GTEIHG
Trigger: CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAG...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATAACTGGTGGCTCCTCTaGGAGGGAACCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHNWWLL*EGTWIQ
Trigger: CTGTATCCAGGTTCCCTCCCAGAGGAGCCACCAGTT...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGTGTGAAGGTTCCTGCTaGGCTCCCCAAACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGCEGSC*APQTSK
Trigger: TTTGGAGGTTTGGGGAGCCCAGCAGGAACCTTCACA...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATTTTGGGAGGCTGAGCTaGGCGGATCACGAGTTTAGG +
Preference number: 4 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHFGRLS*ADHEFR
Trigger: CCTAAACTCGTGATCCGCCCAGCTCAGCCTCCCAAA...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTGCAACCTCCACCTCCTaGGTTCAAGGGATTCTCCCG +
Preference number: 4 (lower is better)
Translates to: KVSNCLRRETNSYLLSPAATSTS*VQGILP
Trigger: CGGGAGAATCCCTTGAACCCAGGAGGTGGAGGTTGC...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR TCA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATTACGGAGTAAAGCCCTaGAGTGGTGACTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHYGVKP*SGDSPE
Trigger: CTCTGGTGAGTCACCACTTCAGGGCTTTACTCCGTA...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCGGAACCTGGATACAGTaGGGAGAAAAGAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSGTWIQ*GEKSTV
Trigger: CACAGTGCTCTTTTCTCCTCACTGTATCCAGGTTCC...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGGGAACCTGGATACAGTaGGGAGAAAAGAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGGTWIQ*GEKSTV
Trigger: CACAGTGCTCTTTTCTCCTCACTGTATCCAGGTTCC...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCTGGCATGATCTCAGCTaGCTGCAACCTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAWHDLS*LQPPPP
Trigger: AGGAGGTGGAGGTTGCAGTCAGCTGAGATCATGCCA...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR TCA 90 bp GTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTGGAGGGCAATGGCATaGTCTCAGCTGACTGCAACC +
Preference number: 4 (lower is better)
Translates to: VMPSSKVSNCLRRETNSYWRAMA*SQLTAT
Trigger: GGTTGCAGTCAGCTGAGATCATGCCATTGCCCTCCA...ATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR GCA 90 bp AATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTAGCGCCAATCCTGTTTaGCATATCTCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NCLRRETNSYLLSPAPWGSANPV*HISAFF
Trigger: GAAGAAGGCAGAGATATGGCAAACAGGATTGGCGCT...ACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTCCCACGTCTAGCTTaGAGAGCAGCTCTCGTAGCC +
Preference number: 4 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYFPRLA*RAALVA
Trigger: GGCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAA...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCTTCCCACGTCTAGCTTaGAGAGCAGCTCTCGTAGCC +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAFPRLA*RAALVA
Trigger: GGCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAA...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCCACCCCAGAGCTATaGCAACAAAATCTGTTACGG +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGPTPEL*QQNLLR
Trigger: CCGTAACAGATTTTGTTGGCATAGCTCTGGGGTGGG...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCCCCACCCCAGAGCTATaGCAACAAAATCTGTTACGG +
Preference number: 4 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSPTPEL*QQNLLR
Trigger: CCGTAACAGATTTTGTTGGCATAGCTCTGGGGTGGG...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp GTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATGCCCCAGATCATGCCTaGTTCATCTTGGCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: VMPSSKVSNCLRRETNSYAPDHA*FILASS
Trigger: GGAGCTAGCCAAGATGAAGCAGGCATGATCTGGGGC...ATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATCTGAAGACCAGACCGTaGACTAACGAGAGAACCGAC +
Preference number: 4 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHLKTRP*TNERTD
Trigger: GTCGGTTCTCTCGTTAGTCCACGGTCTGGTCTTCAG...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000676712.2
ENST00000678921.2
CDS-3UTR CCA 90 bp AATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTAGTTCTCAAACACTGTaGGCACATACACCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: NCLRRETNSYLLSPAPWGSSQTL*AHTPLG
Trigger: TCCCAGAGGTGTATGTGCCCACAGTGTTTGAGAACT...ACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATAACATCGGTATCTaGGTAGGAGAGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSYNIGI*VGEGPQ
Trigger: CTGAGGCCCCTCTCCTACCCAGATACCGATGTTATA...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp GAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGTATAACATCGGTATCTaGGTAGGAGAGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ETNSYLLSPAPWGTEIHGYNIGI*VGEGPQ
Trigger: CTGAGGCCCCTCTCCTACCCAGATACCGATGTTATA...CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCAACTGGTGGCTCCTCTaGGAGGGAACCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLANWWLL*EGTWIQ
Trigger: CTGTATCCAGGTTCCCTCCCAGAGGAGCCACCAGTT...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGCCAGTTTCTTCCGGATaGCAGCCATTGATCTTTAAT +
Preference number: 4 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLPVSSG*QPLIFN
Trigger: ATTAAAGATCAATGGCTGCCATCCGGAAGAAACTGG...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445425.6
CDS-3UTR CCA 90 bp AGGAGAGGGAAGGCATTAGGGCTTTCTATCTGGACTCCCAGCCTTCAAGATTTCTTAGGGCTTTCTATCTaGACTCCCAGCCTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: RRGKALGLSIWTPSLQDFLGLSI*TPSLQD
Trigger: ATCTTGAAGGCTGGGAGTCCAGATAGAAAGCCCTAA...GAAATCTTGAAGGCTGGGAGTCCAGATAGAAAGCCCTAATGCCTTCCCTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR TCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTACGGAGTAAAGCCCTaGAGTGGTGACTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYYGVKP*SGDSPE
Trigger: CTCTGGTGAGTCACCACTTCAGGGCTTTACTCCGTA...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCTACGGAGTAAAGCCCTaGAGTGGTGACTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAYGVKP*SGDSPE
Trigger: CTCTGGTGAGTCACCACTTCAGGGCTTTACTCCGTA...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCAGCTCCATGGGGTACTaGGATACATGGGGCCGAAAA +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLASSMGY*DTWGRK
Trigger: TTTTCGGCCCCATGTATCTCAGTACCCCATGGAGCT...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp GTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATAGCTCCATGGGGTACTaGGATACATGGGGCCGAAAA +
Preference number: 4 (lower is better)
Translates to: VMPSSKVSNCLRRETNSYSSMGY*DTWGRK
Trigger: TTTTCGGCCCCATGTATCTCAGTACCCCATGGAGCT...ATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTGGAGAGAAGAGAGACTaGGTGCCACCCATGAGAACT +
Preference number: 4 (lower is better)
Translates to: KVSNCLRRETNSYLLSPAGEKRD*VPPMRT
Trigger: AGTTCTCATGGGTGGCACTCAGTCTCTCTTCTCTCC...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCGGAGAGAAGAGAGACTaGGTGCCACCCATGAGAACT +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAGEKRD*VPPMRT
Trigger: AGTTCTCATGGGTGGCACTCAGTCTCTCTTCTCTCC...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCAGCGCCAATCCTGTTTaGCATATCTCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSSANPV*HISAFF
Trigger: GAAGAAGGCAGAGATATGGCAAACAGGATTGGCGCT...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCTGAAGACCAGACCGTaGACTAACGAGAGAACCGAC +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLALKTRP*TNERTD
Trigger: GTCGGTTCTCTCGTTAGTCCACGGTCTGGTCTTCAG...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000676712.2
ENST00000678921.2
CDS-3UTR CCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCTGAAGACCAGACCGTaGACTAACGAGAGAACCGAC +
Preference number: 4 (lower is better)
Translates to: KVSNCLRRETNSYLLSPALKTRP*TNERTD
Trigger: GTCGGTTCTCTCGTTAGTCCACGGTCTGGTCTTCAG...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000676712.2
ENST00000678921.2
CDS-3UTR CCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACCCAGTTTCTTCCGGATaGCAGCCATTGCTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYPVSSG*QPLLRQ
Trigger: TTGCCTGAGCAATGGCTGCCATCCGGAAGAAACTGG...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000454011.7
ENST00000676712.2
ENST00000678921.2
CDS-3UTR CCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGAGTTCTCAAACACTGTaGGCACATACACCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGSSQTL*AHTPLG
Trigger: TCCCAGAGGTGTATGTGCCCACAGTGTTTGAGAACT...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCTTAGCCCAGCTCCATaGGGTACTGAGATACATGGG +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLALSPAP*GTEIHG
Trigger: CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAG...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp GTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATCTTAGCCCAGCTCCATaGGGTACTGAGATACATGGG +
Preference number: 4 (lower is better)
Translates to: VMPSSKVSNCLRRETNSYLSPAP*GTEIHG
Trigger: CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAG...ATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCATGCTTAAGTCCAGGTaGGACAGGTTATGCCATCTT +
Preference number: 4 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSMLKSR*DRLCHL
Trigger: AAGATGGCATAACCTGTCTCACCTGGACTTAAGCAT...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGATGCTTAAGTCCAGGTaGGACAGGTTATGCCATCTT +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGMLKSR*DRLCHL
Trigger: AAGATGGCATAACCTGTCTCACCTGGACTTAAGCAT...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCGGAACCTGGATACAGTaGGGAGAAAAGAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAGTWIQ*GEKSTV
Trigger: CACAGTGCTCTTTTCTCCTCACTGTATCCAGGTTCC...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp ATGAAATGGTTCATTCTCAGGCCAGCAGTCCTTATGGGCATAGCACTACCTCATTCCTGGCCAACATGGTaGAACCCCTCTTTACTAAAA +
Preference number: 4 (lower is better)
Translates to: MKWFILRPAVLMGIALPHSWPTW*NPSLLK
Trigger: TTTTAGTAAAGAGGGGTTTCACCATGTTGGCCAGGA...ATGAGGTAGTGCTATGCCCATAAGGACTGCTGGCCTGAGAATGAACCATTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR GCA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATAGCGCCAATCCTGTTTaGCATATCTCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHSANPV*HISAFF
Trigger: GAAGAAGGCAGAGATATGGCAAACAGGATTGGCGCT...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp ATTACTCAAGCTACCAATCCAGGACTAAATGCCCTGAAGGAAATAAAGCCTACCCCCACCCCAGAGCTATaGCAACAAAATCTGTTACGG +
Preference number: 4 (lower is better)
Translates to: ITQATNPGLNALKEIKPTPTPEL*QQNLLR
Trigger: CCGTAACAGATTTTGTTGGCATAGCTCTGGGGTGGG...GGTAGGCTTTATTTCCTTCAGGGCATTTAGTCCTGGATTGGTAGCTTGAGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR GCA 90 bp ATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCGAAATCCAAAGTGTCTAATTaGCTCAGGCGTGAAACCAAT +
Preference number: 4 (lower is better)
Translates to: IPIYLAQLHGVLRYMGPKSKVSN*LRRETN
Trigger: ATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGA...TTTCGGCCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp AATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTTCCAAAGTGTCTAATTaGCTCAGGCGTGAAACCAAT +
Preference number: 4 (lower is better)
Translates to: NCLRRETNSYLLSPAPWGSKVSN*LRRETN
Trigger: ATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGA...ACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGGTGGGCCAGACGGGTTaGACATCGTTAATAATCATA +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGVGQTG*TSLIII
Trigger: TATGATTATTAACGATGTCCAACCCGTCTGGCCCAC...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR TCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCCTTAGGGATCTTCTGTaGAGATCCCAATTAATGAGG +
Preference number: 4 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSLRDLL*RSQLMR
Trigger: CCTCATTAATTGGGATCTTCACAGAAGATCCCTAAG...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR GCA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATAAAGCCAACTCTACCTaGTTTCCATCCACCTCGATA +
Preference number: 4 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHKANST*FPSTSI
Trigger: TATCGAGGTGGATGGAAAGCAGGTAGAGTTGGCTTT...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCAGCGCCAATCCTGTTTaGCATATCTCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLASANPV*HISAFF
Trigger: GAAGAAGGCAGAGATATGGCAAACAGGATTGGCGCT...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACAGCGCCAATCCTGTTTaGCATATCTCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYSANPV*HISAFF
Trigger: GAAGAAGGCAGAGATATGGCAAACAGGATTGGCGCT...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp GAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGTCCAAAGTGTCTAATTaGCTCAGGCGTGAAACCAAT +
Preference number: 4 (lower is better)
Translates to: ETNSYLLSPAPWGTEIHGSKVSN*LRRETN
Trigger: ATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGA...CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTCCAAAGTGTCTAATTaGCTCAGGCGTGAAACCAAT +
Preference number: 4 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSSKVSN*LRRETN
Trigger: ATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGA...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTAGTTCTCAAACACTGTaGGCACATACACCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KVSNCLRRETNSYLLSPASSQTL*AHTPLG
Trigger: TCCCAGAGGTGTATGTGCCCACAGTGTTTGAGAACT...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp GTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATAGTTCTCAAACACTGTaGGCACATACACCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VMPSSKVSNCLRRETNSYSSQTL*AHTPLG
Trigger: TCCCAGAGGTGTATGTGCCCACAGTGTTTGAGAACT...ATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCAGTTCTCAAACACTGTaGGCACATACACCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLASSQTL*AHTPLG
Trigger: TCCCAGAGGTGTATGTGCCCACAGTGTTTGAGAACT...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGTGGGCCAGACGGGTTaGACATCGTTAATAATCATA +
Preference number: 4 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHVGQTG*TSLIII
Trigger: TATGATTATTAACGATGTCCAACCCGTCTGGCCCAC...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp AATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTAAAAGTTTAGTCAGCTaGAGAGAAGAGAGACTGAGT +
Preference number: 4 (lower is better)
Translates to: NCLRRETNSYLLSPAPWGKSLVS*REERLS
Trigger: ACTCAGTCTCTCTTCTCTCCAGCTGACTAAACTTTT...ACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp ATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCGAAAAAAAGTTTAGTCAGCTaGAGAGAAGAGAGACTGAGT +
Preference number: 4 (lower is better)
Translates to: IPIYLAQLHGVLRYMGPKKSLVS*REERLS
Trigger: ACTCAGTCTCTCTTCTCTCCAGCTGACTAAACTTTT...TTTCGGCCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCACTGCATTCCAGCCTaGGTGACAAAAGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: KVSNCLRRETNSYLLSPAHCIPA*VTKAKL
Trigger: CAGTTTTGCTTTTGTCACCCAGGCTGGAATGCAGTG...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGAAACATGGTATTCACTaGGAAGTAGAGGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGKHGIH*EVEGRG
Trigger: ACCTCTTCCCTCTACTTCCCAGTGAATACCATGTTT...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR TCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCATGCTTAAGTCCAGGTaGGACAGGTTATGCCATCTT +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAMLKSR*DRLCHL
Trigger: AAGATGGCATAACCTGTCTCACCTGGACTTAAGCAT...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACGTGGGCCAGACGGGTTaGACATCGTTAATAATCATA +
Preference number: 4 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYVGQTG*TSLIII
Trigger: TATGATTATTAACGATGTCCAACCCGTCTGGCCCAC...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTGTGGGCCAGACGGGTTaGACATCGTTAATAATCATA +
Preference number: 4 (lower is better)
Translates to: KVSNCLRRETNSYLLSPAVGQTG*TSLIII
Trigger: TATGATTATTAACGATGTCCAACCCGTCTGGCCCAC...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCAAAAGTTTAGTCAGCTaGAGAGAAGAGAGACTGAGT +
Preference number: 4 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSKSLVS*REERLS
Trigger: ACTCAGTCTCTCTTCTCTCCAGCTGACTAAACTTTT...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTTCCAAAGTGTCTAATTaGCTCAGGCGTGAAACCAAT +
Preference number: 4 (lower is better)
Translates to: KVSNCLRRETNSYLLSPASKVSN*LRRETN
Trigger: ATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGA...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR GCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCTCCAAAGTGTCTAATTaGCTCAGGCGTGAAACCAAT +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLASKVSN*LRRETN
Trigger: ATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGA...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATAAAAGTTTAGTCAGCTaGAGAGAAGAGAGACTGAGT +
Preference number: 4 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHKSLVS*REERLS
Trigger: ACTCAGTCTCTCTTCTCTCCAGCTGACTAAACTTTT...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCTACCAAAGTAATAGCTaGGGAAGGCAATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAYQSNS*GRQSRV
Trigger: GACTCTTGATTGCCTTCCCCAGCTATTACTTTGGTA...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp GAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGCCACTAATTTATCTTTaGCCTCACATGTACCAAAGT +
Preference number: 4 (lower is better)
Translates to: ETNSYLLSPAPWGTEIHGPLIYL*PHMYQS
Trigger: ACTTTGGTACATGTGAGGCCAAAGATAAATTAGTGG...CCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CCA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTAAAAGTTTAGTCAGCTaGAGAGAAGAGAGACTGAGT +
Preference number: 4 (lower is better)
Translates to: KVSNCLRRETNSYLLSPAKSLVS*REERLS
Trigger: ACTCAGTCTCTCTTCTCTCCAGCTGACTAAACTTTT...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CCA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCAAAAGTTTAGTCAGCTaGAGAGAAGAGAGACTGAGT +
Preference number: 4 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAKSLVS*REERLS
Trigger: ACTCAGTCTCTCTTCTCTCCAGCTGACTAAACTTTT...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS CCA 90 bp ACGCCCCCGGGTGGGGCGAGGGCCAGTCATGGCGGAGTCCTGGTCTaGGCAGGCCTTGCAGGCTCTGCCGGCCACGGTGCTGGGCGCGCT +
Preference number: 5 (lower is better)
Translates to: TPPGGARASHGGVLV*AGLAGSAGHGAGRA
Trigger: AGCGCGCCCAGCACCGTGGCCGGCAGAGCCTGCAAGGCCTGCCCAGACCAGGACTCCGCCATGACTGGCCCTCGCCCCACCCGGGGGCGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265538.3
CDS CCA 90 bp CATTGCCCGGGTGGGGCGAGGGCCAGTCATGGCGGAGTCCTGGTCTaGGCAGGCCTTGCAGGCTCTGCCGGCCACGGTGCTGGGCGCGCT +
Preference number: 5 (lower is better)
Translates to: HCPGGARASHGGVLV*AGLAGSAGHGAGRA
Trigger: AGCGCGCCCAGCACCGTGGCCGGCAGAGCCTGCAAGGCCTGCCCAGACCAGGACTCCGCCATGACTGGCCCTCGCCCCACCCGGGCAATG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS CCA 90 bp CCGGCCACGGTGCTGGGCGCGCTGGGCAGCGAGTTCTTGCGGGAGTaGGAGGCGCAGGACATGCGCGTGACCCTCTTCAAGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PATVLGALGSEFLRE*EAQDMRVTLFKLLL
Trigger: CAGCAGCAGCTTGAAGAGGGTCACGCGCATGTCCTGCGCCTCCCACTCCCGCAAGAACTCGCTGCCCAGCGCGCCCAGCACCGTGGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265538.3
CDS TCA 90 bp GACGCCGGTCCGCGAGTCGCAAACTCGGAGACGAAGGCGGGTAGCTaGAGACCAGACCGTGGACTAACGAGAGAACCGACGGAGGACCGC +
Preference number: 5 (lower is better)
Translates to: DAGPRVANSETKAGS*RPDRGLTREPTEDR
Trigger: GCGGTCCTCCGTCGGTTCTCTCGTTAGTCCACGGTCTGGTCTTCAGCTACCCGCCTTCGTCTCCGAGTTTGCGACTCGCGGACCGGCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000431929.2
ENST00000445425.6
ENST00000676712.2
ENST00000678921.2
CDS-3UTR CAA 90 bp AAGAAATTCCTTGAATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCCTGGGCAGCGAGTTCTaGCGGGAGTGGGAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: KKFLELAPGVSGGSAEEGLGSEF*REWEAQ
Trigger: CTGCGCCTCCCACTCCCGCAAGAACTCGCTGCCCAG...GCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAATTCAAGGAATTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS-3UTR CAA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGCTTCCCACGTCTAGCTaGCAGAGCAGCTCTCGTAGC +
Preference number: 5 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRLPTSS*QSSSRS
Trigger: GCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAAG...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGAGGCGGAGGTTGCAGTaGAGCCAAGATCGTGCCACA +
Preference number: 5 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRRRRLQ*SQDRAT
Trigger: TGTGGCACGATCTTGGCTCAACTGCAACCTCCGCCT...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422781.6
ENST00000678921.2
CDS-3UTR CAA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGGGTGGGCCAGACGGGTaGGACATCGTTAATAATCAT +
Preference number: 5 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRGGPDG*DIVNNH
Trigger: ATGATTATTAACGATGTCCAACCCGTCTGGCCCACC...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGAAGCGCCAATCCTGTTaGCCATATCTCTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRKRQSC*PYLCLL
Trigger: AAGAAGGCAGAGATATGGCAAACAGGATTGGCGCTT...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp TCTCAATGCTTCTCCTCCAGTGAGGAAGCCCTGCCATTAGGCCAGCTGGTTTCTCTTCCCACGTCTAGCTaGCAGAGCAGCTCTCGTAGC +
Preference number: 5 (lower is better)
Translates to: SQCFSSSEEALPLGQLVSLPTSS*QSSSRS
Trigger: GCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAAG...AGAAACCAGCTGGCCTAATGGCAGGGCTTCCTCACTGGAGGAGAAGCATTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CAA 90 bp AAGAAATTCCTTGAATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCAGGCGGAGGTTGCAGTaGAGCCAAGATCGTGCCACA +
Preference number: 5 (lower is better)
Translates to: KKFLELAPGVSGGSAEEGRRRLQ*SQDRAT
Trigger: TGTGGCACGATCTTGGCTCAACTGCAACCTCCGCCT...GCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAATTCAAGGAATTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422781.6
ENST00000678921.2
CDS-3UTR CAA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGTCCGGATGGCAGCCATaGCTCAGGCAACGAATCCGA +
Preference number: 5 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLSGWQP*LRQRIR
Trigger: TCGGATTCGTTGCCTGAGCAATGGCTGCCATCCGGA...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000454011.7
ENST00000676712.2
ENST00000678921.2
CDS-3UTR CAA 90 bp AAGAAATTCCTTGAATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTCCGGATGGCAGCCATaGCCAAAGTGTAACTGGACT +
Preference number: 5 (lower is better)
Translates to: KKFLELAPGVSGGSAEEGSGWQP*PKCNWT
Trigger: AGTCCAGTTACACTTTGGCAATGGCTGCCATCCGGA...GCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAATTCAAGGAATTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679208.1
CDS-3UTR CAA 90 bp AATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTTCCGGATGGCAGCCATaGCTCAGGCAACGAATCCGA +
Preference number: 5 (lower is better)
Translates to: NCLRRETNSYLLSPAPWGSGWQP*LRQRIR
Trigger: TCGGATTCGTTGCCTGAGCAATGGCTGCCATCCGGA...ACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000454011.7
ENST00000676712.2
ENST00000678921.2
CDS-3UTR CAA 90 bp AATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTCTTCCCACGTCTAGCTaGCAGAGCAGCTCTCGTAGC +
Preference number: 5 (lower is better)
Translates to: NCLRRETNSYLLSPAPWGLPTSS*QSSSRS
Trigger: GCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAAG...ACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp ATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCGAAACTTCCCACGTCTAGCTaGCAGAGCAGCTCTCGTAGC +
Preference number: 5 (lower is better)
Translates to: IPIYLAQLHGVLRYMGPKLPTSS*QSSSRS
Trigger: GCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAAG...TTTCGGCCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp AAGAAATTCCTTGAATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCGGTGGGCCAGACGGGTaGGACATCGTTAATAATCAT +
Preference number: 5 (lower is better)
Translates to: KKFLELAPGVSGGSAEEGGGPDG*DIVNNH
Trigger: ATGATTATTAACGATGTCCAACCCGTCTGGCCCACC...GCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAATTCAAGGAATTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp ATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCGAAATCTGGGAGGCGGAGGTaGCAGTTGAGCCAAGATCGT +
Preference number: 5 (lower is better)
Translates to: IPIYLAQLHGVLRYMGPKSGRRR*QLSQDR
Trigger: ACGATCTTGGCTCAACTGCAACCTCCGCCTCCCAGA...TTTCGGCCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422781.6
ENST00000678921.2
CDS-3UTR CAA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCTTCCCACGTCTAGCTaGCAGAGCAGCTCTCGTAGC +
Preference number: 5 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGLPTSS*QSSSRS
Trigger: GCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAAG...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp CAGGTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCCTTCCCACGTCTAGCTaGCAGAGCAGCTCTCGTAGC +
Preference number: 5 (lower is better)
Translates to: QVMPSSKVSNCLRRETNSLPTSS*QSSSRS
Trigger: GCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAAG...GGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp GTGCAGAGGAGGGCTGTTAGAGCAGTGTCAAAAGGACCCTGGTGGGCCAGACGGACCAATACACTTTCTTaGAGGATGACAGTATTAGGA +
Preference number: 5 (lower is better)
Translates to: VQRRAVRAVSKGPWWARRTNTLS*RMTVLG
Trigger: TCCTAATACTGTCATCCTCAAAGAAAGTGTATTGGT...CCGTCTGGCCCACCAGGGTCCTTTTGACACTGCTCTAACAGCCCTCCTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp AAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGTCTGGGAGGCGGAGGTaGCAGTTGAGCCAAGATCGT +
Preference number: 5 (lower is better)
Translates to: KPIPIYLAQLHGVLRYMGSGRRR*QLSQDR
Trigger: ACGATCTTGGCTCAACTGCAACCTCCGCCTCCCAGA...CCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422781.6
ENST00000678921.2
CDS-3UTR CAA 90 bp GCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAAGCGCCAATCCTGTTaGCCATATCTCTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: ASGVKPIPIYLAQLHGVLKRQSC*PYLCLL
Trigger: AAGAAGGCAGAGATATGGCAAACAGGATTGGCGCTT...CAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp GTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTCCGGATGGCAGCCATaGCTCAGGCAACGAATCCGA +
Preference number: 5 (lower is better)
Translates to: VMPSSKVSNCLRRETNSYSGWQP*LRQRIR
Trigger: TCGGATTCGTTGCCTGAGCAATGGCTGCCATCCGGA...ATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000454011.7
ENST00000676712.2
ENST00000678921.2
CDS-3UTR CAA 90 bp TGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTCCGGATGGCAGCCATaGCTCAGGCAACGAATCCGA +
Preference number: 5 (lower is better)
Translates to: CHLPKCLIASGVKPIPIYSGWQP*LRQRIR
Trigger: TCGGATTCGTTGCCTGAGCAATGGCTGCCATCCGGA...GTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000454011.7
ENST00000676712.2
ENST00000678921.2
CDS-3UTR CAA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCTTCCCACGTCTAGCTaGCAGAGCAGCTCTCGTAGC +
Preference number: 5 (lower is better)
Translates to: LPKCLIASGVKPIPIYLALPTSS*QSSSRS
Trigger: GCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAAG...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp ATTAGCGCCTGGTGTGTCAGGTGGGAGTGCAGAGGAGGGCTGTTAGAGCAGTGTACCAATACACTTTCTTaGAGGATGACAGTATTAGGA +
Preference number: 5 (lower is better)
Translates to: ISAWCVRWECRGGLLEQCTNTLS*RMTVLG
Trigger: TCCTAATACTGTCATCCTCAAAGAAAGTGTATTGGT...ACACTGCTCTAACAGCCCTCCTCTGCACTCCCACCTGACACACCAGGCGCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp ACCAAAGTAATAGCTGGGGAAGGCAATCAAGAGTCTAACAGGCCCGGGCGTGGTGCCACTAATTTATCTTaGGCCTCACATGTACCAAAG +
Preference number: 5 (lower is better)
Translates to: TKVIAGEGNQESNRPGRGATNLS*ASHVPK
Trigger: CTTTGGTACATGTGAGGCCAAAGATAAATTAGTGGC...ACCACGCCCGGGCCTGTTAGACTCTTGATTGCCTTCCCCAGCTATTACTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CAA 90 bp AATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTAAGCGCCAATCCTGTTaGCCATATCTCTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: NCLRRETNSYLLSPAPWGKRQSC*PYLCLL
Trigger: AAGAAGGCAGAGATATGGCAAACAGGATTGGCGCTT...ACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp ACCAAAGTAATAGCTGGGGAAGGCAATCAAGAGTCTAACAGGCCCGGGCGTGGTACCAATACACTTTCTTaGAGGATGACAGTATTAGGA +
Preference number: 5 (lower is better)
Translates to: TKVIAGEGNQESNRPGRGTNTLS*RMTVLG
Trigger: TCCTAATACTGTCATCCTCAAAGAAAGTGTATTGGT...ACCACGCCCGGGCCTGTTAGACTCTTGATTGCCTTCCCCAGCTATTACTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CAA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCTGTAATCCCTGCACTTaGGGAGGCAAAAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: LPKCLIASGVKPIPIYLACNPCT*GGKSGQ
Trigger: CTGCCCACTTTTGCCTCCCAAAGTGCAGGGATTACA...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678921.2
CDS-3UTR CAA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTGGTGGGCCAGACGGGTaGGACATCGTTAATAATCAT +
Preference number: 5 (lower is better)
Translates to: KVSNCLRRETNSYLLSPAGGPDG*DIVNNH
Trigger: ATGATTATTAACGATGTCCAACCCGTCTGGCCCACC...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp CTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCGGTGGGCCAGACGGGTaGGACATCGTTAATAATCAT +
Preference number: 5 (lower is better)
Translates to: LPKCLIASGVKPIPIYLAGGPDG*DIVNNH
Trigger: ATGATTATTAACGATGTCCAACCCGTCTGGCCCACC...GGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTAAGCGCCAATCCTGTTaGCCATATCTCTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: KVSNCLRRETNSYLLSPAKRQSC*PYLCLL
Trigger: AAGAAGGCAGAGATATGGCAAACAGGATTGGCGCTT...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp GTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATAAGCGCCAATCCTGTTaGCCATATCTCTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: VMPSSKVSNCLRRETNSYKRQSC*PYLCLL
Trigger: AAGAAGGCAGAGATATGGCAAACAGGATTGGCGCTT...ATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp ATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATGGGGCCGAAAACCAATACACTTTCTTaGAGGATGACAGTATTAGGA +
Preference number: 5 (lower is better)
Translates to: IPIYLAQLHGVLRYMGPKTNTLS*RMTVLG
Trigger: TCCTAATACTGTCATCCTCAAAGAAAGTGTATTGGT...TTTCGGCCCCATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp CGTGAAACCAATTCCTATTTACTTAGCCCAGCTCCATGGGGTACTGAGATACATACCAATACACTTTCTTaGAGGATGACAGTATTAGGA +
Preference number: 5 (lower is better)
Translates to: RETNSYLLSPAPWGTEIHTNTLS*RMTVLG
Trigger: TCCTAATACTGTCATCCTCAAAGAAAGTGTATTGGT...ATGTATCTCAGTACCCCATGGAGCTGGGCTAAGTAAATAGGAATTGGTTTCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp GTTATGCCATCTTCCAAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATACCAATACACTTTCTTaGAGGATGACAGTATTAGGA +
Preference number: 5 (lower is better)
Translates to: VMPSSKVSNCLRRETNSYTNTLS*RMTVLG
Trigger: TCCTAATACTGTCATCCTCAAAGAAAGTGTATTGGT...ATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTTGGAAGATGGCATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS-3UTR CAA 90 bp AAAGTGTCTAATTGCCTCAGGCGTGAAACCAATTCCTATTTACTTAGCCCAGCTACCAATACACTTTCTTaGAGGATGACAGTATTAGGA +
Preference number: 5 (lower is better)
Translates to: KVSNCLRRETNSYLLSPATNTLS*RMTVLG
Trigger: TCCTAATACTGTCATCCTCAAAGAAAGTGTATTGGT...AGCTGGGCTAAGTAAATAGGAATTGGTTTCACGCCTGAGGCAATTAGACACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000445425.6
ENST00000454011.7
ENST00000676712.2
ENST00000678200.1
ENST00000678921.2
ENST00000679208.1
CDS CAA 90 bp GTGGGGCGAGGGCCAGTCATGGCGGAGTCCTGGTCTGGGCAGGCCTaGCAGGCTCTGCCGGCCACGGTGCTGGGCGCGCTGGGCAGCGAG +
Preference number: 6 (lower is better)
Translates to: VGRGPVMAESWSGQA*QALPATVLGALGSE
Trigger: CTCGCTGCCCAGCGCGCCCAGCACCGTGGCCGGCAGAGCCTGCAAGGCCTGCCCAGACCAGGACTCCGCCATGACTGGCCCTCGCCCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265538.3
ENST00000678200.1
CDS CAA 72 bp CCGGCCACGGTGCTGGGCGCGCTGGGCAGCGAGTTCTaGCGGGAGTGGGAGGCGCAGGACATGCGCGTGACC +
Preference number: 6 (lower is better)
Translates to: PATVLGALGSEF*REWEAQDMRVT
Trigger: GGTCACGCGCATGTCCTGCGCCTCCCACTCCCGCAAGAACTCGCTGCCCAGCGCGCCCAGCACCGTGGCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265538.3
ENST00000678200.1
CDS CAA 72 bp CCCGCGCACGCGCGCGCACTCACAGCTCATCCACTATaGCTCAGGAGCCCGTCCACGCCCCCGGGTGGGGCG +
Preference number: 6 (lower is better)
Translates to: PAHARALTAHPL*LRSPSTPPGGA
Trigger: CGCCCCACCCGGGGGCGTGGACGGGCTCCTGAGCAATAGTGGATGAGCTGTGAGTGCGCGCGCGTGCGCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265538.3
CDS GCA 72 bp CCGCGCACGCGCGCGCACTCACAGCTCATCCACTATTaGTCAGGAGCCCGTCCACGCCCCCGGGTGGGGCGA +
Preference number: 6 (lower is better)
Translates to: PRTRAHSQLIHY*SGARPRPRVGR
Trigger: TCGCCCCACCCGGGGGCGTGGACGGGCTCCTGAGCAATAGTGGATGAGCTGTGAGTGCGCGCGCGTGCGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265538.3
CDS CCA 72 bp GGTGGGGCGAGGGCCAGTCATGGCGGAGTCCTGGTCTaGGCAGGCCTTGCAGGCTCTGCCGGCCACGGTGCT +
Preference number: 6 (lower is better)
Translates to: GGARASHGGVLV*AGLAGSAGHGA
Trigger: AGCACCGTGGCCGGCAGAGCCTGCAAGGCCTGCCCAGACCAGGACTCCGCCATGACTGGCCCTCGCCCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265538.3
ENST00000678200.1
CDS CAA 90 bp CAGGCTCTGCCGGCCACGGTGCTGGGCGCGCTGGGCAGCGAGTTCTaGCGGGAGTGGGAGGCGCAGGACATGCGCGTGACCCTCTTCAAG +
Preference number: 6 (lower is better)
Translates to: QALPATVLGALGSEF*REWEAQDMRVTLFK
Trigger: CTTGAAGAGGGTCACGCGCATGTCCTGCGCCTCCCACTCCCGCAAGAACTCGCTGCCCAGCGCGCCCAGCACCGTGGCCGGCAGAGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265538.3
CDS CCA 72 bp GTGCTGGGCGCGCTGGGCAGCGAGTTCTTGCGGGAGTaGGAGGCGCAGGACATGCGCGTGACCCTCTTCAAG +
Preference number: 6 (lower is better)
Translates to: VLGALGSEFLRE*EAQDMRVTLFK
Trigger: CTTGAAGAGGGTCACGCGCATGTCCTGCGCCTCCCACTCCCGCAAGAACTCGCTGCCCAGCGCGCCCAGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265538.3
CDS TCA 72 bp CCGCGAGTCGCAAACTCGGAGACGAAGGCGGGTAGCTaGAGACCAGACCGTGGACTAACGAGAGAACCGACG +
Preference number: 6 (lower is better)
Translates to: PRVANSETKAGS*RPDRGLTREPT
Trigger: CGTCGGTTCTCTCGTTAGTCCACGGTCTGGTCTTCAGCTACCCGCCTTCGTCTCCGAGTTTGCGACTCGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000431929.2
ENST00000445425.6
ENST00000676712.2
ENST00000678921.2
CDS CCA 72 bp AGGCTCCATCACCAACAATCACCAGTTTCTTCCGGATaGCAGCCATTGCCCGGGTGGGGCGAGGGCCAGTCA +
Preference number: 6 (lower is better)
Translates to: RLHHQQSPVSSG*QPLPGWGEGQS
Trigger: TGACTGGCCCTCGCCCCACCCGGGCAATGGCTGCCATCCGGAAGAAACTGGTGATTGTTGGTGATGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678200.1
CDS CCA 72 bp AGGCTCCATCACCAACAATCACCAGTTTCTTCCGGATaGCAGCCATTGCTCAGGCAACGAATCCGAGTCCAG +
Preference number: 6 (lower is better)
Translates to: RLHHQQSPVSSG*QPLLRQRIRVQ
Trigger: CTGGACTCGGATTCGTTGCCTGAGCAATGGCTGCCATCCGGAAGAAACTGGTGATTGTTGGTGATGGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000418115.6
ENST00000422781.6
ENST00000431929.2
ENST00000454011.7
ENST00000676712.2
ENST00000677684.1
ENST00000678921.2
CDS CCA 72 bp AGGCTCCATCACCAACAATCACCAGTTTCTTCCGGATaGCAGCCATTGATCTTTAATCCCAGCACTTTGGGA +
Preference number: 6 (lower is better)
Translates to: RLHHQQSPVSSG*QPLIFNPSTLG
Trigger: TCCCAAAGTGCTGGGATTAAAGATCAATGGCTGCCATCCGGAAGAAACTGGTGATTGTTGGTGATGGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445425.6
CDS CCA 72 bp AGGCTCCATCACCAACAATCACCAGTTTCTTCCGGATaGCAGCCATTGCCAAAGTGTAACTGGACTTTAATC +
Preference number: 6 (lower is better)
Translates to: RLHHQQSPVSSG*QPLPKCNWTLI
Trigger: GATTAAAGTCCAGTTACACTTTGGCAATGGCTGCCATCCGGAAGAAACTGGTGATTGTTGGTGATGGAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679208.1