RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RHNO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000171792

Ensembl transcript IDs: ENST00000366285.5, ENST00000461997.5, ENST00000464682.2, ENST00000489288.7, ENST00000535978.5, ENST00000536063.1, ENST00000538636.5, ENST00000538700.2, ENST00000618250.4, ENST00000623153.1

Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGGGCCAGCAGATGACTTaGGGTCAGGATTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: LAFSADESRLQRWQSTIEGQQMT*GQDFET
Trigger: GGTCTCAAAATCCTGACCTCAAGTCATCTGCTGGCC...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
3UTR-3UTR TCA 90 bp GTAGAAGCTGCCACTGAGCCTGACAAGAGTTGGTACTCAAAAATGCAGAATGAAGGCCAGCAGATGACTTaGGGTCAGGATTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: VEAATEPDKSWYSKMQNEGQQMT*GQDFET
Trigger: GGTCTCAAAATCCTGACCTCAAGTCATCTGCTGGCC...TTCATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTCAGTGGCAGCTTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
3UTR-3UTR CCA 90 bp TGTCTGAGTAAAAGGCCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTATCAAGGTTGCAGAGGTaGCAGTCAACCATAGAGTCA +
Preference number: 2 (lower is better)
Translates to: CLSKRPRHSVDWGSPSALSRLQR*QSTIES
Trigger: TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGA...TAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGGCCTTTTACTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
3UTR-3UTR TCA 90 bp CACGCAATCCTAAAGAACTCATCTATGTCCCCCTTATCTCCCCTCATCTTATGTTGCCTTTTCAGCAGATaGGTCAAGGTTGCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: HAILKNSSMSPLSPLILCCLFSR*VKVAEV
Trigger: CACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCA...ACATAAGATGAGGGGAGATAAGGGGGACATAGATGAGTTCTTTAGGATTGCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
3UTR-3UTR GCA 90 bp CACGCAATCCTAAAGAACTCATCTATGTCCCCCTTATCTCCCCTCATCTTATGTCAGATGAGTCAAGGTTaGAGAGGTGGCAGTCAACCA +
Preference number: 2 (lower is better)
Translates to: HAILKNSSMSPLSPLILCQMSQG*RGGSQP
Trigger: TGGTTGACTGCCACCTCTGCAACCTTGACTCATCTG...ACATAAGATGAGGGGAGATAAGGGGGACATAGATGAGTTCTTTAGGATTGCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
3UTR-3UTR CCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCAGAGCCTGACAAGAGTTaGTACTCAAAAATGCAGAAT +
Preference number: 2 (lower is better)
Translates to: AFSADESRLQRWQSTIESEPDKS*YSKMQN
Trigger: ATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTC...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
3UTR-3UTR TCA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAAGGCCAGCAGATGACTTaGGGTCAGGATTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKGQQMT*GQDFET
Trigger: GGTCTCAAAATCCTGACCTCAAGTCATCTGCTGGCC...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
3UTR-3UTR GCA 90 bp CCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAATTACAATAAGTAATCCAGGAAGTGGTGGTTaGAGTAAGGTGAGATCATAC +
Preference number: 2 (lower is better)
Translates to: PRHSVDWGSPSALITISNPGSGG*SKVRSY
Trigger: GTATGATCTCACCTTACTGCAACCACCACTTCCTGG...ATTACTTATTGTAATTAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
3UTR-3UTR GCA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAACCAGGAAGTGGTGGTTaGAGTAAGGTGAGATCATAC +
Preference number: 2 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKPGSGG*SKVRSY
Trigger: GTATGATCTCACCTTACTGCAACCACCACTTCCTGG...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
3UTR-3UTR CAA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGAGGCAGGAGAATCGCTaGAACCCAGGAAGTGGTGGT +
Preference number: 3 (lower is better)
Translates to: LAFSADESRLQRWQSTIERQENR*NPGSGG
Trigger: ACCACCACTTCCTGGGTTCAAGCGATTCTCCTGCCT...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
3UTR-3UTR CAA 90 bp TGTCTGAGTAAAAGGCCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTATGCCCTTTCTTCTTCTaGCCTTTTCAGCAGATGAGT +
Preference number: 3 (lower is better)
Translates to: CLSKRPRHSVDWGSPSALCPFFF*PFQQMS
Trigger: ACTCATCTGCTGAAAAGGCAAGAAGAAGAAAGGGCA...TAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGGCCTTTTACTCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
3UTR-3UTR CAA 90 bp CACGCAATCCTAAAGAACTCATCTATGTCCCCCTTATCTCCCCTCATCTTATGTTCCCTAAAACAGGGCTaGCTGCCCTTTCTTCTTCTT +
Preference number: 3 (lower is better)
Translates to: HAILKNSSMSPLSPLILCSLKQG*LPFLLL
Trigger: AAGAAGAAGAAAGGGCAGCAAGCCCTGTTTTAGGGA...ACATAAGATGAGGGGAGATAAGGGGGACATAGATGAGTTCTTTAGGATTGCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
3UTR-3UTR CAA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAAAGGCAGGAGAATCGCTaGAACCCAGGAAGTGGTGGT +
Preference number: 3 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKRQENR*NPGSGG
Trigger: ACCACCACTTCCTGGGTTCAAGCGATTCTCCTGCCT...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
3UTR CCA 72 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTaGCAGTCAACCATAGAGTCACAGAGTTTGATTTTT +
Preference number: 3 (lower is better)
Translates to: LAFSADESRLQR*QSTIESQSLIF
Trigger: AAAAATCAAACTCTGTGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR GCA 90 bp AATCGCTTGAACCCAGGAAGTGGTGGTTGCAGTAAGGTGAGATCATACCACTGCTCCAATTCCAACCCATaGCAGCCCGGGCCGGACGGG +
Preference number: 4 (lower is better)
Translates to: NRLNPGSGGCSKVRSYHCSNSNP*QPGPDG
Trigger: CCCGTCCGGCCCGGGCTGGCATGGGTTGGAATTGGA...GCAGTGGTATGATCTCACCTTACTGCAACCACCACTTCCTGGGTTCAAGCGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461997.5
ENST00000489288.7
CDS-3UTR GCA 90 bp CCGGTTTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAATCCAATTCCAACCCATaGCAGCCCGGGCCGGACGGG +
Preference number: 4 (lower is better)
Translates to: PVLVFLVGWEQASCCCIKSNSNP*QPGPDG
Trigger: CCCGTCCGGCCCGGGCTGGCATGGGTTGGAATTGGA...TTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAAACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR CCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGAGCAGCGGGGCTTTCTaGGAAGGCTGGCGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: LAFSADESRLQRWQSTIESSGAF*EGWRRF
Trigger: AAAACGCCGCCAGCCTTCCCAGAAAGCCCCGCTGCT...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CCGGTTTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAAAGCAGCGGGGCTTTCTaGGAAGGCTGGCGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: PVLVFLVGWEQASCCCIKSSGAF*EGWRRF
Trigger: AAAACGCCGCCAGCCTTCCCAGAAAGCCCCGCTGCT...TTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR CCA 90 bp CCGGTTTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAACCCTCCAGTGGTTGTTaGTGGAACAGCAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: PVLVFLVGWEQASCCCIKPSSGC*WNSSGA
Trigger: AGCCCCGCTGCTGTTCCACCAACAACCACTGGAGGG...TTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR GCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTCCTTCGAGCCCGGAATaGCGAGACAAGGCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFPSSPE*RDKAGA
Trigger: GGCGCCGGCCTTGTCTCGGCATTCCGGGCTCGAAGG...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461997.5
ENST00000618250.4
CDS-3UTR GCA 90 bp CACGCAATCCTAAAGAACTCATCTATGTCCCCCTTATCTCCCCTCATCTTATGTTCCAATTCCAACCCATaGCAGCCCGGGCCGGACGGG +
Preference number: 4 (lower is better)
Translates to: HAILKNSSMSPLSPLILCSNSNP*QPGPDG
Trigger: CCCGTCCGGCCCGGGCTGGCATGGGTTGGAATTGGA...ACATAAGATGAGGGGAGATAAGGGGGACATAGATGAGTTCTTTAGGATTGCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489288.7
CDS-3UTR CCA 90 bp TGTCTGAGTAAAAGGCCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTACCCTCCAGTGGTTGTTaGTGGAACAGCAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: CLSKRPRHSVDWGSPSALPSSGC*WNSSGA
Trigger: AGCCCCGCTGCTGTTCCACCAACAACCACTGGAGGG...TAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGGCCTTTTACTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CCGGTTTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAAGGTCAATGGGCTTGCTaGGCACCTGTCGAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PVLVFLVGWEQASCCCIKGQWAC*APVECE
Trigger: CTCACACTCGACAGGTGCCCAGCAAGCCCATTGACC...TTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAAACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR CCA 90 bp CCGGTTTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAATGGTGCTGTGGTCAATaGGCTTGCTGGGCACCTGTC +
Preference number: 4 (lower is better)
Translates to: PVLVFLVGWEQASCCCIKWCCGQ*ACWAPV
Trigger: GACAGGTGCCCAGCAAGCCCATTGACCACAGCACCA...TTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAAACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR CCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCATGGTGCTGTGGTCAATaGGCTTGCTGGGCACCTGTC +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESWCCGQ*ACWAPV
Trigger: GACAGGTGCCCAGCAAGCCCATTGACCACAGCACCA...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCACACAGCTTTGGGGACTaGGCACTGGAACTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESHSFGD*ALELRV
Trigger: GACCCTTAGTTCCAGTGCTCAGTCCCCAAAGCTGTG...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR GCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCATGTGGTCAATGGGCTTaGTGGGCACCTGTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESCGQWA*WAPVEC
Trigger: ACACTCGACAGGTGCCCAGCAAGCCCATTGACCACA...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR GCA 90 bp TTCCTGCTGCTGTATCAAAATCAGGTGATACCTCAGCCTCCCAAAGTGCTGGGATGTGGTCAATGGGCTTaGTGGGCACCTGTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: FLLLYQNQVIPQPPKVLGCGQWA*WAPVEC
Trigger: ACACTCGACAGGTGCCCAGCAAGCCCATTGACCACA...TCCCAGCACTTTGGGAGGCTGAGGTATCACCTGATTTTGATACAGCAGCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR GCA 90 bp CCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAATTACAATAAGTAATCCTTCGAGCCCGGAATaGCGAGACAAGGCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: PRHSVDWGSPSALITISNPSSPE*RDKAGA
Trigger: GGCGCCGGCCTTGTCTCGGCATTCCGGGCTCGAAGG...ATTACTTATTGTAATTAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618250.4
CDS-3UTR CCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCATCCAGTGGTTGTTGGTaGAACAGCAGCGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESSSGCW*NSSGAF
Trigger: GAAAGCCCCGCTGCTGTTCCACCAACAACCACTGGA...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTTTGGGGCCCTCCAGTaGTTGTTGGTGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: LAFSADESRLQRWQSTIEFGALQ*LLVEQQ
Trigger: CTGCTGTTCCACCAACAACCACTGGAGGGCCCCAAA...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp TGTCTGAGTAAAAGGCCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAGGTCAATGGGCTTGCTaGGCACCTGTCGAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: CLSKRPRHSVDWGSPSALGQWAC*APVECE
Trigger: CTCACACTCGACAGGTGCCCAGCAAGCCCATTGACC...TAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGGCCTTTTACTCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CCGGTTTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAAGAAGTGATGGTGCTGTaGTCAATGGGCTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PVLVFLVGWEQASCCCIKEVMVL*SMGLLG
Trigger: GCCCAGCAAGCCCATTGACCACAGCACCATCACTTC...TTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAAACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR TCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCAGTGATACCCAGGAAGTaGTGGTGCTGTGGTCAATGG +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESVIPRK*WCCGQW
Trigger: CCATTGACCACAGCACCATCACTTCCTGGGTATCAC...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGCTGAAGTGCCTGCACTaGCATGTTCCCACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LAFSADESRLQRWQSTIELKCLH*HVPTAL
Trigger: CAAAGCTGTGGGAACATGTCAGTGCAGGCACTTCAG...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CCGGTTTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAAAGAATGCCCAGGAAGTaGTGGTGCTGTGGTCAATGG +
Preference number: 4 (lower is better)
Translates to: PVLVFLVGWEQASCCCIKRMPRK*WCCGQW
Trigger: CCATTGACCACAGCACCATCACTTCCTGGGCATTCT...TTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAAACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR GCA 90 bp TGTCTGAGTAAAAGGCCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAGGGAAGCTGTGTAGATaGACAGCTGTGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: CLSKRPRHSVDWGSPSALGKLCR*TAVFGA
Trigger: GGCCCCAAACACAGCTGTGCATCTACACAGCTTCCC...TAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGGCCTTTTACTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp GTAGAAGCTGCCACTGAGCCTGACAAGAGTTGGTACTCAAAAATGCAGAATGAACCCTCCAGTGGTTGTTaGTGGAACAGCAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: VEAATEPDKSWYSKMQNEPSSGC*WNSSGA
Trigger: AGCCCCGCTGCTGTTCCACCAACAACCACTGGAGGG...TTCATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTCAGTGGCAGCTTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGGTGTTTCTGGTAGGCTaGGAACAAGCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LAFSADESRLQRWQSTIEVFLVG*EQASCC
Trigger: GCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACAC...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCAAACAGGTCCAGGCTCTaGGCTATTAGGAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESNRSRL*AIRSAS
Trigger: ACTGGCACTCCTAATAGCCCAGAGCCTGGACCTGTT...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp TTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAAATCAGGGCACCTGTCGAGTGTaGGTGATGGGAAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: FGVSGRLGTSFLLLYQNQGTCRV*VMGSCV
Trigger: TACACAGCTTCCCATCACTCACACTCGACAGGTGCC...CTGATTTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR TCA 90 bp TGTCTGAGTAAAAGGCCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAGGTAGGTTTTCGACTTaGGTGTCTCGCCCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: CLSKRPRHSVDWGSPSALGRFST*VSRPVL
Trigger: CAAAACCGGGCGAGACACTCAAGTCGAAAACCTACC...TAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGGCCTTTTACTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp AATCGCTTGAACCCAGGAAGTGGTGGTTGCAGTAAGGTGAGATCATACCACTGCGATCCCCAATGTCTCTaGACTGGAAGATTGCGGACT +
Preference number: 4 (lower is better)
Translates to: NRLNPGSGGCSKVRSYHCDPQCL*TGRLRT
Trigger: AGTCCGCAATCTTCCAGTTCAGAGACATTGGGGATC...GCAGTGGTATGATCTCACCTTACTGCAACCACCACTTCCTGGGTTCAAGCGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGGATCCCCAATGTCTCTaGACTGGAAGATTGCGGACT +
Preference number: 4 (lower is better)
Translates to: LAFSADESRLQRWQSTIEDPQCL*TGRLRT
Trigger: AGTCCGCAATCTTCCAGTTCAGAGACATTGGGGATC...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGGGAAACATCCTTTTCTaGTTCACTGGGGCACTCTCG +
Preference number: 4 (lower is better)
Translates to: LAFSADESRLQRWQSTIEGNILF*FTGALS
Trigger: CGAGAGTGCCCCAGTGAATCAGAAAAGGATGTTTCC...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTTCCTTCACAGACGATaGCTCTGGGGTCTGGATATC +
Preference number: 4 (lower is better)
Translates to: LAFSADESRLQRWQSTIEFLHRR*LWGLDI
Trigger: GATATCCAGACCCCAGAGTCATCGTCTGTGAAGGAA...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp AATCGCTTGAACCCAGGAAGTGGTGGTTGCAGTAAGGTGAGATCATACCACTGCTTAGGAGTGCCAGTGTaGAGAGTGCAGCTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: NRLNPGSGGCSKVRSYHCLGVPV*RVQLRR
Trigger: CCTTCTAAGCTGCACTCTTCACACTGGCACTCCTAA...GCAGTGGTATGATCTCACCTTACTGCAACCACCACTTCCTGGGTTCAAGCGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCATTAGGAGTGCCAGTGTaGAGAGTGCAGCTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESLGVPV*RVQLRR
Trigger: CCTTCTAAGCTGCACTCTTCACACTGGCACTCCTAA...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp GTAGAAGCTGCCACTGAGCCTGACAAGAGTTGGTACTCAAAAATGCAGAATGAAGCCGAGACATTCGGTTaGCTGGGGAAGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VEAATEPDKSWYSKMQNEAETFG*LGKSFC
Trigger: GCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGGC...TTCATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTCAGTGGCAGCTTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR GCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCACAGATGAGTCAAGGTTaGAGAGGTGGCAGTCAACCA +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESQMSQG*RGGSQP
Trigger: TGGTTGACTGCCACCTCTGCAACCTTGACTCATCTG...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTAGCAGCGGGGCTTTCTaGGAAGGCTGGCGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFSSGAF*EGWRRF
Trigger: AAAACGCCGCCAGCCTTCCCAGAAAGCCCCGCTGCT...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp TGTCTGAGTAAAAGGCCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAATGCACAGCTGTGTTTaGGGCCCTCCAGTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: CLSKRPRHSVDWGSPSALMHSCV*GPPVVV
Trigger: AACAACCACTGGAGGGCCCCAAACACAGCTGTGCAT...TAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGGCCTTTTACTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CACGCAATCCTAAAGAACTCATCTATGTCCCCCTTATCTCCCCTCATCTTATGTGGTCAATGGGCTTGCTaGGCACCTGTCGAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: HAILKNSSMSPLSPLILCGQWAC*APVECE
Trigger: CTCACACTCGACAGGTGCCCAGCAAGCCCATTGACC...ACATAAGATGAGGGGAGATAAGGGGGACATAGATGAGTTCTTTAGGATTGCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGATGTTCCCACAGCTTTaGGGACTGAGCACTGGAACT +
Preference number: 4 (lower is better)
Translates to: LAFSADESRLQRWQSTIEMFPQL*GLSTGT
Trigger: AGTTCCAGTGCTCAGTCCCCAAAGCTGTGGGAACAT...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCAGCATCAACCGGTGAATaGGGAACAGTTAGTAACCAC +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESASTGE*GTVSNH
Trigger: GTGGTTACTAACTGTTCCTCATTCACCGGTTGATGC...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CCGGTTTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAAGCATCAACCGGTGAATaGGGAACAGTTAGTAACCAC +
Preference number: 4 (lower is better)
Translates to: PVLVFLVGWEQASCCCIKASTGE*GTVSNH
Trigger: GTGGTTACTAACTGTTCCTCATTCACCGGTTGATGC...TTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR TCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCTGATCTTGGGGAATaGGTTCTTCCTTCACAGACG +
Preference number: 4 (lower is better)
Translates to: LAFSADESRLQRWQSTIESDLGE*VLPSQT
Trigger: CGTCTGTGAAGGAAGAACTCATTCCCCAAGATCAGA...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR GCA 90 bp AATCGCTTGAACCCAGGAAGTGGTGGTTGCAGTAAGGTGAGATCATACCACTGCCCAGGAAGTGGTGGTTaGAGTAAGGTGAGATCATAC +
Preference number: 4 (lower is better)
Translates to: NRLNPGSGGCSKVRSYHCPGSGG*SKVRSY
Trigger: GTATGATCTCACCTTACTGCAACCACCACTTCCTGG...GCAGTGGTATGATCTCACCTTACTGCAACCACCACTTCCTGGGTTCAAGCGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCCCCTCCAGTGGTTGTTaGTGGAACAGCAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFPSSGC*WNSSGA
Trigger: AGCCCCGCTGCTGTTCCACCAACAACCACTGGAGGG...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp GTAGAAGCTGCCACTGAGCCTGACAAGAGTTGGTACTCAAAAATGCAGAATGAATTTGGGGCCCTCCAGTaGTTGTTGGTGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: VEAATEPDKSWYSKMQNEFGALQ*LLVEQQ
Trigger: CTGCTGTTCCACCAACAACCACTGGAGGGCCCCAAA...TTCATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTCAGTGGCAGCTTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp TTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAAATCAGATGCACAGCTGTGTTTaGGGCCCTCCAGTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: FGVSGRLGTSFLLLYQNQMHSCV*GPPVVV
Trigger: AACAACCACTGGAGGGCCCCAAACACAGCTGTGCAT...CTGATTTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR CCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTTGGTGCTGTGGTCAATaGGCTTGCTGGGCACCTGTC +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFWCCGQ*ACWAPV
Trigger: GACAGGTGCCCAGCAAGCCCATTGACCACAGCACCA...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp GTTTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAAATCGTGTTTCTGGTAGGCTaGGAACAAGCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VLVFLVGWEQASCCCIKIVFLVG*EQASCC
Trigger: GCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACAC...GATTTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR CCA 90 bp AATCGCTTGAACCCAGGAAGTGGTGGTTGCAGTAAGGTGAGATCATACCACTGCCCTTTTCTGATTCACTaGGGCACTCTCGGATTAAGG +
Preference number: 4 (lower is better)
Translates to: NRLNPGSGGCSKVRSYHCPFLIH*GTLGLR
Trigger: CCTTAATCCGAGAGTGCCCCAGTGAATCAGAAAAGG...GCAGTGGTATGATCTCACCTTACTGCAACCACCACTTCCTGGGTTCAAGCGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCAAGGTTGCAGAGGTaGCAGTCAACCATAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LAFSADESRLQRWQSTIESRLQR*QSTIES
Trigger: TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGA...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CACGCAATCCTAAAGAACTCATCTATGTCCCCCTTATCTCCCCTCATCTTATGTGTGATACCCAGGAAGTaGTGGTGCTGTGGTCAATGG +
Preference number: 4 (lower is better)
Translates to: HAILKNSSMSPLSPLILCVIPRK*WCCGQW
Trigger: CCATTGACCACAGCACCATCACTTCCTGGGTATCAC...ACATAAGATGAGGGGAGATAAGGGGGACATAGATGAGTTCTTTAGGATTGCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp GTAGAAGCTGCCACTGAGCCTGACAAGAGTTGGTACTCAAAAATGCAGAATGAAGGTAGGTTTTCGACTTaGGTGTCTCGCCCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: VEAATEPDKSWYSKMQNEGRFST*VSRPVL
Trigger: CAAAACCGGGCGAGACACTCAAGTCGAAAACCTACC...TTCATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTCAGTGGCAGCTTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTCACAGCTTTGGGGACTaGGCACTGGAACTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFHSFGD*ALELRV
Trigger: GACCCTTAGTTCCAGTGCTCAGTCCCCAAAGCTGTG...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGGTCGTCTCCTCCATGTaGCCTTTATTCCATACTTGT +
Preference number: 4 (lower is better)
Translates to: LAFSADESRLQRWQSTIEVVSSM*PLFHTC
Trigger: ACAAGTATGGAATAAAGGTCACATGGAGGAGACGAC...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp TTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAAATCAGCAGTGGTCTTGTTCTTaGTTCCCAGCACCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: FGVSGRLGTSFLLLYQNQQWSCS*FPAPSR
Trigger: TCTGCTAGGTGCTGGGAATCAAGAACAAGACCACTG...CTGATTTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR GCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTGGGAAGCTGTGTAGATaGACAGCTGTGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFGKLCR*TAVFGA
Trigger: GGCCCCAAACACAGCTGTGCATCTACACAGCTTCCC...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTTTTGGGGCCCTCCAGTaGTTGTTGGTGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFFGALQ*LLVEQQ
Trigger: CTGCTGTTCCACCAACAACCACTGGAGGGCCCCAAA...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCACTTTTCACAAGGAATTaGCTTCTGCTCAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESLFTRN*LLLSFP
Trigger: AGGGAAGCTGAGCAGAAGCCAATTCCTTGTGAAAAG...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCATGTATCAAAATCAGGTaGTACCCAGGAAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESCIKIR*YPGSDG
Trigger: ACCATCACTTCCTGGGTATCACCTGATTTTGATACA...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp AATCGCTTGAACCCAGGAAGTGGTGGTTGCAGTAAGGTGAGATCATACCACTGCTGTATCAAAATCAGGTaGTACCCAGGAAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: NRLNPGSGGCSKVRSYHCCIKIR*YPGSDG
Trigger: ACCATCACTTCCTGGGTATCACCTGATTTTGATACA...GCAGTGGTATGATCTCACCTTACTGCAACCACCACTTCCTGGGTTCAAGCGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGGGATATCAGGTGGAATaGACACATAAGGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LAFSADESRLQRWQSTIEGYQVE*THKVSS
Trigger: AGAGCTTACCTTATGTGTTCATTCCACCTGATATCC...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCAGGATATCAGGTGGAATaGACACATAAGGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESGYQVE*THKVSS
Trigger: AGAGCTTACCTTATGTGTTCATTCCACCTGATATCC...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CACGCAATCCTAAAGAACTCATCTATGTCCCCCTTATCTCCCCTCATCTTATGTTTCCTTCACAGACGATaGCTCTGGGGTCTGGATATC +
Preference number: 4 (lower is better)
Translates to: HAILKNSSMSPLSPLILCFLHRR*LWGLDI
Trigger: GATATCCAGACCCCAGAGTCATCGTCTGTGAAGGAA...ACATAAGATGAGGGGAGATAAGGGGGACATAGATGAGTTCTTTAGGATTGCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp GTAGAAGCTGCCACTGAGCCTGACAAGAGTTGGTACTCAAAAATGCAGAATGAATTAGGAGTGCCAGTGTaGAGAGTGCAGCTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: VEAATEPDKSWYSKMQNELGVPV*RVQLRR
Trigger: CCTTCTAAGCTGCACTCTTCACACTGGCACTCCTAA...TTCATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTCAGTGGCAGCTTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp TGTCTGAGTAAAAGGCCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAGTCGTCTCCTCCATGTaGCCTTTATTCCATACTTGT +
Preference number: 4 (lower is better)
Translates to: CLSKRPRHSVDWGSPSALVVSSM*PLFHTC
Trigger: ACAAGTATGGAATAAAGGTCACATGGAGGAGACGAC...TAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGGCCTTTTACTCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTGGCCAGCAGATGACTTaGGGTCAGGATTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFGQQMT*GQDFET
Trigger: GGTCTCAAAATCCTGACCTCAAGTCATCTGCTGGCC...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAAAGCAGCGGGGCTTTCTaGGAAGGCTGGCGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKSSGAF*EGWRRF
Trigger: AAAACGCCGCCAGCCTTCCCAGAAAGCCCCGCTGCT...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTATGCACAGCTGTGTTTaGGGCCCTCCAGTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFMHSCV*GPPVVV
Trigger: AACAACCACTGGAGGGCCCCAAACACAGCTGTGCAT...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCGAAGTGATGGTGCTGTaGTCAATGGGCTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFEVMVL*SMGLLG
Trigger: GCCCAGCAAGCCCATTGACCACAGCACCATCACTTC...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAATTACAATAAGTAATGAAGTGATGGTGCTGTaGTCAATGGGCTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PRHSVDWGSPSALITISNEVMVL*SMGLLG
Trigger: GCCCAGCAAGCCCATTGACCACAGCACCATCACTTC...ATTACTTATTGTAATTAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp GTAGAAGCTGCCACTGAGCCTGACAAGAGTTGGTACTCAAAAATGCAGAATGAAATGTTCCCACAGCTTTaGGGACTGAGCACTGGAACT +
Preference number: 4 (lower is better)
Translates to: VEAATEPDKSWYSKMQNEMFPQL*GLSTGT
Trigger: AGTTCCAGTGCTCAGTCCCCAAAGCTGTGGGAACAT...TTCATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTCAGTGGCAGCTTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTGATACCTGTCGAGTGTaGGTGATGGGAAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFDTCRV*VMGSCV
Trigger: TACACAGCTTCCCATCACTCACACTCGACAGGTATC...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461997.5
CDS-3UTR TCA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCCTGAAGTGCCTGCACTaGCATGTTCCCACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFLKCLH*HVPTAL
Trigger: CAAAGCTGTGGGAACATGTCAGTGCAGGCACTTCAG...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTTTCCTTCACAGACGATaGCTCTGGGGTCTGGATATC +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFFLHRR*LWGLDI
Trigger: GATATCCAGACCCCAGAGTCATCGTCTGTGAAGGAA...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCGGCCAGCAGATGACTTaGGGTCAGGATTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFGQQMT*GQDFET
Trigger: GGTCTCAAAATCCTGACCTCAAGTCATCTGCTGGCC...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTTGCCTTTTCAGCAGATaGGTCAAGGTTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFCLFSR*VKVAEV
Trigger: CACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCA...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR GCA 90 bp GTTTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAAATCTGGGAACAAGCTTCCTaGTGCTGTATCAAAATCAGG +
Preference number: 4 (lower is better)
Translates to: VLVFLVGWEQASCCCIKIWEQAS*CCIKIR
Trigger: CCTGATTTTGATACAGCAGCAGGAAGCTTGTTCCCA...GATTTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR GCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCATCTGAACTGGAAGATTaGGGACTCTCAAAAGTTAGA +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESSELED*GLSKVR
Trigger: TCTAACTTTTGAGAGTCCGCAATCTTCCAGTTCAGA...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR GCA 90 bp AATCGCTTGAACCCAGGAAGTGGTGGTTGCAGTAAGGTGAGATCATACCACTGCTCTGAACTGGAAGATTaGGGACTCTCAAAAGTTAGA +
Preference number: 4 (lower is better)
Translates to: NRLNPGSGGCSKVRSYHCSELED*GLSKVR
Trigger: TCTAACTTTTGAGAGTCCGCAATCTTCCAGTTCAGA...GCAGTGGTATGATCTCACCTTACTGCAACCACCACTTCCTGGGTTCAAGCGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAATTACAATAAGTAATGTGTTTCTGGTAGGCTaGGAACAAGCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PRHSVDWGSPSALITISNVFLVG*EQASCC
Trigger: GCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACAC...ATTACTTATTGTAATTAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp GTAGAAGCTGCCACTGAGCCTGACAAGAGTTGGTACTCAAAAATGCAGAATGAACCTTTTCTGATTCACTaGGGCACTCTCGGATTAAGG +
Preference number: 4 (lower is better)
Translates to: VEAATEPDKSWYSKMQNEPFLIH*GTLGLR
Trigger: CCTTAATCCGAGAGTGCCCCAGTGAATCAGAAAAGG...TTCATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTCAGTGGCAGCTTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CACGCAATCCTAAAGAACTCATCTATGTCCCCCTTATCTCCCCTCATCTTATGTCCTTTTCTGATTCACTaGGGCACTCTCGGATTAAGG +
Preference number: 4 (lower is better)
Translates to: HAILKNSSMSPLSPLILCPFLIH*GTLGLR
Trigger: CCTTAATCCGAGAGTGCCCCAGTGAATCAGAAAAGG...ACATAAGATGAGGGGAGATAAGGGGGACATAGATGAGTTCTTTAGGATTGCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp GTAGAAGCTGCCACTGAGCCTGACAAGAGTTGGTACTCAAAAATGCAGAATGAAGATGACTCTGGGGTCTaGATATCAGGTGGAATGAAC +
Preference number: 4 (lower is better)
Translates to: VEAATEPDKSWYSKMQNEDDSGV*ISGGMN
Trigger: GTTCATTCCACCTGATATCCAGACCCCAGAGTCATC...TTCATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTCAGTGGCAGCTTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp AATCGCTTGAACCCAGGAAGTGGTGGTTGCAGTAAGGTGAGATCATACCACTGCGAGCCTGACAAGAGTTaGTACTCAAAAATGCAGAAT +
Preference number: 4 (lower is better)
Translates to: NRLNPGSGGCSKVRSYHCEPDKS*YSKMQN
Trigger: ATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTC...GCAGTGGTATGATCTCACCTTACTGCAACCACCACTTCCTGGGTTCAAGCGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
3UTR CAA 72 bp TTTCTTCTTCTTGCCTTTTCAGCAGATGAGTCAAGGTaGCAGAGGTGGCAGTCAACCATAGAGTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: FLLLAFSADESR*QRWQSTIESQS
Trigger: ACTCTGTGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAGAAGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAAGGCACCTGTCGAGTGTaGGTGATGGGAAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKGTCRV*VMGSCV
Trigger: TACACAGCTTCCCATCACTCACACTCGACAGGTGCC...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCGGAAACATCCTTTTCTaGTTCACTGGGGCACTCTCG +
Preference number: 4 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFGNILF*FTGALS
Trigger: CGAGAGTGCCCCAGTGAATCAGAAAAGGATGTTTCC...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAACACAGCTTTGGGGACTaGGCACTGGAACTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKHSFGD*ALELRV
Trigger: GACCCTTAGTTCCAGTGCTCAGTCCCCAAAGCTGTG...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp GTAGAAGCTGCCACTGAGCCTGACAAGAGTTGGTACTCAAAAATGCAGAATGAAGAGATGCTACTTGTCTaGGTAAAAGGCCGAGACATT +
Preference number: 4 (lower is better)
Translates to: VEAATEPDKSWYSKMQNEEMLLV*VKGRDI
Trigger: AATGTCTCGGCCTTTTACTCAGACAAGTAGCATCTC...TTCATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTCAGTGGCAGCTTCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCAGAACTAAGGGTCTTCTaGAAACATCCTTTTCTGATT +
Preference number: 4 (lower is better)
Translates to: AFSADESRLQRWQSTIESELRVF*KHPFLI
Trigger: AATCAGAAAAGGATGTTTCCAGAAGACCCTTAGTTC...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGGAACTAAGGGTCTTCTaGAAACATCCTTTTCTGATT +
Preference number: 4 (lower is better)
Translates to: LAFSADESRLQRWQSTIEELRVF*KHPFLI
Trigger: AATCAGAAAAGGATGTTTCCAGAAGACCCTTAGTTC...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAATTACAATAAGTAATATGTTCCCACAGCTTTaGGGACTGAGCACTGGAACT +
Preference number: 4 (lower is better)
Translates to: PRHSVDWGSPSALITISNMFPQL*GLSTGT
Trigger: AGTTCCAGTGCTCAGTCCCCAAAGCTGTGGGAACAT...ATTACTTATTGTAATTAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTGATGACTCTGGGGTCTaGATATCAGGTGGAATGAAC +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFDDSGV*ISGGMN
Trigger: GTTCATTCCACCTGATATCCAGACCCCAGAGTCATC...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CACGCAATCCTAAAGAACTCATCTATGTCCCCCTTATCTCCCCTCATCTTATGTAGACATTCGGTTGACTaGGGAAGTCCTTCTGCATTA +
Preference number: 4 (lower is better)
Translates to: HAILKNSSMSPLSPLILCRHSVD*GSPSAL
Trigger: TAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCT...ACATAAGATGAGGGGAGATAAGGGGGACATAGATGAGTTCTTTAGGATTGCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCGCATCAACCGGTGAATaGGGAACAGTTAGTAACCAC +
Preference number: 4 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFASTGE*GTVSNH
Trigger: GTGGTTACTAACTGTTCCTCATTCACCGGTTGATGC...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAATTACAATAAGTAATTCTGATCTTGGGGAATaGGTTCTTCCTTCACAGACG +
Preference number: 4 (lower is better)
Translates to: PRHSVDWGSPSALITISNSDLGE*VLPSQT
Trigger: CGTCTGTGAAGGAAGAACTCATTCCCCAAGATCAGA...ATTACTTATTGTAATTAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTGAGATGCTACTTGTCTaGGTAAAAGGCCGAGACATT +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFEMLLV*VKGRDI
Trigger: AATGTCTCGGCCTTTTACTCAGACAAGTAGCATCTC...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAATTCCCCAGTTCTTCCTaGTCCTCTGCCAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKFPSSS*SSASQF
Trigger: GAATTGGCTGGCAGAGGATCAGGAAGAACTGGGGAA...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618250.4
CDS-3UTR GCA 90 bp ACAGGCGTAAGCCACAACACCTGGTCTAGATATAACTTATTTATCTTTAAACTTGGGAAGCTGTGTAGATaGACAGCTGTGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TGVSHNTWSRYNLFIFKLGKLCR*TAVFGA
Trigger: GGCCCCAAACACAGCTGTGCATCTACACAGCTTCCC...AAGTTTAAAGATAAATAAGTTATATCTAGACCAGGTGTTGTGGCTTACGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR GCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTTGGGAACAAGCTTCCTaGTGCTGTATCAAAATCAGG +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFWEQAS*CCIKIR
Trigger: CCTGATTTTGATACAGCAGCAGGAAGCTTGTTCCCA...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp ACAGGCGTAAGCCACAACACCTGGTCTAGATATAACTTATTTATCTTTAAACTTTTTGGGGCCCTCCAGTaGTTGTTGGTGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: TGVSHNTWSRYNLFIFKLFGALQ*LLVEQQ
Trigger: CTGCTGTTCCACCAACAACCACTGGAGGGCCCCAAA...AAGTTTAAAGATAAATAAGTTATATCTAGACCAGGTGTTGTGGCTTACGCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR CCA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAAATGCACAGCTGTGTTTaGGGCCCTCCAGTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKMHSCV*GPPVVV
Trigger: AACAACCACTGGAGGGCCCCAAACACAGCTGTGCAT...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAAGTGTTTCTGGTAGGCTaGGAACAAGCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKVFLVG*EQASCC
Trigger: GCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACAC...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAATTACAATAAGTAATGATGACTCTGGGGTCTaGATATCAGGTGGAATGAAC +
Preference number: 4 (lower is better)
Translates to: PRHSVDWGSPSALITISNDDSGV*ISGGMN
Trigger: GTTCATTCCACCTGATATCCAGACCCCAGAGTCATC...ATTACTTATTGTAATTAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAAAACAGGTCCAGGCTCTaGGCTATTAGGAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKNRSRL*AIRSAS
Trigger: ACTGGCACTCCTAATAGCCCAGAGCCTGGACCTGTT...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTCTTTTCACAAGGAATTaGCTTCTGCTCAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LFMTQSILENKSRLGQHFLFTRN*LLLSFP
Trigger: AGGGAAGCTGAGCAGAAGCCAATTCCTTGTGAAAAG...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCAAGGTTGCAGAGGTaGCAGTCAACCATAGAGTCA +
Preference number: 4 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFSRLQR*QSTIES
Trigger: TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGA...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp ACAGGCGTAAGCCACAACACCTGGTCTAGATATAACTTATTTATCTTTAAACTTGGTAGGTTTTCGACTTaGGTGTCTCGCCCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: TGVSHNTWSRYNLFIFKLGRFST*VSRPVL
Trigger: CAAAACCGGGCGAGACACTCAAGTCGAAAACCTACC...AAGTTTAAAGATAAATAAGTTATATCTAGACCAGGTGTTGTGGCTTACGCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR TCA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAAGATCCCCAATGTCTCTaGACTGGAAGATTGCGGACT +
Preference number: 4 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKDPQCL*TGRLRT
Trigger: AGTCCGCAATCTTCCAGTTCAGAGACATTGGGGATC...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCGTCGTCTCCTCCATGTaGCCTTTATTCCATACTTGT +
Preference number: 4 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFVVSSM*PLFHTC
Trigger: ACAAGTATGGAATAAAGGTCACATGGAGGAGACGAC...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR GCA 90 bp ACAGGCGTAAGCCACAACACCTGGTCTAGATATAACTTATTTATCTTTAAACTTCAGCACCTAGCAGAATaGCCAGGAAGTGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: TGVSHNTWSRYNLFIFKLQHLAE*PGSDGA
Trigger: AGCACCATCACTTCCTGGGCATTCTGCTAGGTGCTG...AAGTTTAAAGATAAATAAGTTATATCTAGACCAGGTGTTGTGGCTTACGCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR CCA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCCCAATGTCTCTGAACTaGAAGATTGCGGACTCTCAA +
Preference number: 4 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFPMSLN*KIADSQ
Trigger: TTGAGAGTCCGCAATCTTCCAGTTCAGAGACATTGG...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAATTACAATAAGTAATCCAATGTCTCTGAACTaGAAGATTGCGGACTCTCAA +
Preference number: 4 (lower is better)
Translates to: PRHSVDWGSPSALITISNPMSLN*KIADSQ
Trigger: TTGAGAGTCCGCAATCTTCCAGTTCAGAGACATTGG...ATTACTTATTGTAATTAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp GTAGAAGCTGCCACTGAGCCTGACAAGAGTTGGTACTCAAAAATGCAGAATGAAGAGCCTGACAAGAGTTaGTACTCAAAAATGCAGAAT +
Preference number: 4 (lower is better)
Translates to: VEAATEPDKSWYSKMQNEEPDKS*YSKMQN
Trigger: ATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTC...TTCATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTCAGTGGCAGCTTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp CCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAATTACAATAAGTAATAGACATTCGGTTGACTaGGGAAGTCCTTCTGCATTA +
Preference number: 4 (lower is better)
Translates to: PRHSVDWGSPSALITISNRHSVD*GSPSAL
Trigger: TAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCT...ATTACTTATTGTAATTAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp CCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAATTACAATAAGTAATGGATATCAGGTGGAATaGACACATAAGGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PRHSVDWGSPSALITISNGYQVE*THKVSS
Trigger: AGAGCTTACCTTATGTGTTCATTCCACCTGATATCC...ATTACTTATTGTAATTAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CCA 90 bp TTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAAATCAGGTAAGCCACAACACCTaGTCTAGATATAACTTATTT +
Preference number: 4 (lower is better)
Translates to: FGVSGRLGTSFLLLYQNQVSHNT*SRYNLF
Trigger: AAATAAGTTATATCTAGACCAGGTGTTGTGGCTTAC...CTGATTTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR CCA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCGAGCCTGACAAGAGTTaGTACTCAAAAATGCAGAAT +
Preference number: 4 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFEPDKS*YSKMQN
Trigger: ATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTC...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR TCA 90 bp ACAGGCGTAAGCCACAACACCTGGTCTAGATATAACTTATTTATCTTTAAACTTTGTATCAAAATCAGGTaGTACCTCAGCCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: TGVSHNTWSRYNLFIFKLCIKIR*YLSLPK
Trigger: CTTTGGGAGGCTGAGGTATCACCTGATTTTGATACA...AAGTTTAAAGATAAATAAGTTATATCTAGACCAGGTGTTGTGGCTTACGCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR CCA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAAGAACTAAGGGTCTTCTaGAAACATCCTTTTCTGATT +
Preference number: 4 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKELRVF*KHPFLI
Trigger: AATCAGAAAAGGATGTTTCCAGAAGACCCTTAGTTC...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS CCA 90 bp GCACAGCCTCCTATACCAGCCCGGGCCGGACGGGGCCGCAGCTCCTaGCAGACCGCACAGCCTTCGAGCCCGGAATGCCGAGACAAGGCC +
Preference number: 5 (lower is better)
Translates to: AQPPIPARAGRGRSS*QTAQPSSPECRDKA
Trigger: GGCCTTGTCTCGGCATTCCGGGCTCGAAGGCTGTGCGGTCTGCCAGGAGCTGCGGCCCCGTCCGGCCCGGGCTGGTATAGGAGGCTGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618250.4
CDS CCA 90 bp CAATTCCAACCCATGCCAGCCCGGGCCGGACGGGGCCGCAGCTCCTaGCAGACCGCACAGCCTTCGAGCCCGGAATGCCGAGACAAGGCC +
Preference number: 5 (lower is better)
Translates to: QFQPMPARAGRGRSS*QTAQPSSPECRDKA
Trigger: GGCCTTGTCTCGGCATTCCGGGCTCGAAGGCTGTGCGGTCTGCCAGGAGCTGCGGCCCCGTCCGGCCCGGGCTGGCATGGGTTGGAATTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461997.5
CDS CCA 90 bp CAAAATCAGGTGATACCAGCCCGGGCCGGACGGGGCCGCAGCTCCTaGCAGACCGCACAGCCTTCGAGCCCGGAATGCCGAGACAAGGCC +
Preference number: 5 (lower is better)
Translates to: QNQVIPARAGRGRSS*QTAQPSSPECRDKA
Trigger: GGCCTTGTCTCGGCATTCCGGGCTCGAAGGCTGTGCGGTCTGCCAGGAGCTGCGGCCCCGTCCGGCCCGGGCTGGTATCACCTGATTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464682.2
CDS CCA 90 bp AGAGAAGAAACAAAAGCAGCCCGGGCCGGACGGGGCCGCAGCTCCTaGCAGACCGCACAGCCTTCGAGCCCGGAATGCCGAGACAAGGCC +
Preference number: 5 (lower is better)
Translates to: REETKAARAGRGRSS*QTAQPSSPECRDKA
Trigger: GGCCTTGTCTCGGCATTCCGGGCTCGAAGGCTGTGCGGTCTGCCAGGAGCTGCGGCCCCGTCCGGCCCGGGCTGCTTTTGTTTCTTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538636.5
CDS TCA 90 bp GTGATGGTGCTGTGGTCAATGGGCTTGCTGGGCACCTGTCGAGTGTaGGTGATGGGAAGCTGTGTAGATGCACAGCTGTGTTTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: VMVLWSMGLLGTCRV*VMGSCVDAQLCLGP
Trigger: GGGCCCCAAACACAGCTGTGCATCTACACAGCTTCCCATCACTCACACTCGACAGGTGCCCAGCAAGCCCATTGACCACAGCACCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366285.5
ENST00000489288.7
ENST00000535978.5
ENST00000538636.5
ENST00000538700.2
ENST00000618250.4
CDS GCA 90 bp CTTGCTGGGCACCTGTCGAGTGTGAGTGATGGGAAGCTGTGTAGATaGACAGCTGTGTTTGGGGCCCTCCAGTGGTTGTTGGTGGAACAG +
Preference number: 5 (lower is better)
Translates to: LAGHLSSVSDGKLCR*TAVFGALQWLLVEQ
Trigger: CTGTTCCACCAACAACCACTGGAGGGCCCCAAACACAGCTGTGCATCTACACAGCTTCCCATCACTCACACTCGACAGGTGCCCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366285.5
ENST00000489288.7
ENST00000535978.5
ENST00000538636.5
ENST00000538700.2
ENST00000618250.4
CDS-3UTR CAA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCAGGGGCCCTCCAGTGGTaGTTGGTGGAACAGCAGCGG +
Preference number: 5 (lower is better)
Translates to: AFSADESRLQRWQSTIESGALQW*LVEQQR
Trigger: CCGCTGCTGTTCCACCAACAACCACTGGAGGGCCCC...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS CCA 90 bp CTGGTTCTTGAGAATGTAGCAAGATTTCCCCGCTCAGGATGGGGATaGGTCGGAGGAGCCACTCTGGAAGTTTCCCGGGCAAGAAAGTGT +
Preference number: 5 (lower is better)
Translates to: LVLENVARFPRSGWG*VGGATLEVSRARKC
Trigger: ACACTTTCTTGCCCGGGAAACTTCCAGAGTGGCTCCTCCGACCCATCCCCATCCTGAGCGGGGAAATCTTGCTACATTCTCAAGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536063.1
CDS CCA 90 bp CTTTTCCTGGTTCTTGAGAATGTAGCAAGATTTCCCCGCTCAGGATaGGGATGGGTCGGAGGAGCCACTCTGGAAGTTTCCCGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: LFLVLENVARFPRSG*GWVGGATLEVSRAR
Trigger: TCTTGCCCGGGAAACTTCCAGAGTGGCTCCTCCGACCCATCCCCATCCTGAGCGGGGAAATCTTGCTACATTCTCAAGAACCAGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536063.1
CDS-3UTR CAA 90 bp GTTTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAAATCGGGGCCCTCCAGTGGTaGTTGGTGGAACAGCAGCGG +
Preference number: 5 (lower is better)
Translates to: VLVFLVGWEQASCCCIKIGALQW*LVEQQR
Trigger: CCGCTGCTGTTCCACCAACAACCACTGGAGGGCCCC...GATTTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS CCA 90 bp CAAGATTTCCCCGCTCAGGATGGGGATGGGTCGGAGGAGCCACTCTaGAAGTTTCCCGGGCAAGAAAGTGTTGGCAATAATAATAACGGG +
Preference number: 5 (lower is better)
Translates to: QDFPAQDGDGSEEPL*KFPGQESVGNNNNG
Trigger: CCCGTTATTATTATTGCCAACACTTTCTTGCCCGGGAAACTTCCAGAGTGGCTCCTCCGACCCATCCCCATCCTGAGCGGGGAAATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536063.1
CDS-3UTR CAA 90 bp GTAGAAGCTGCCACTGAGCCTGACAAGAGTTGGTACTCAAAAATGCAGAATGAAGGGGCCCTCCAGTGGTaGTTGGTGGAACAGCAGCGG +
Preference number: 5 (lower is better)
Translates to: VEAATEPDKSWYSKMQNEGALQW*LVEQQR
Trigger: CCGCTGCTGTTCCACCAACAACCACTGGAGGGCCCC...TTCATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTCAGTGGCAGCTTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCAGATGCACAGCTGTGTTaGGGGCCCTCCAGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: AFSADESRLQRWQSTIESDAQLC*GPSSGC
Trigger: ACAACCACTGGAGGGCCCCAAACACAGCTGTGCATC...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp CCGGTTTTGGTGTTTCTGGTAGGCTGGGAACAAGCTTCCTGCTGCTGTATCAAAGATGCACAGCTGTGTTaGGGGCCCTCCAGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: PVLVFLVGWEQASCCCIKDAQLC*GPSSGC
Trigger: ACAACCACTGGAGGGCCCCAAACACAGCTGTGCATC...TTTGATACAGCAGCAGGAAGCTTGTTCCCAGCCTACCAGAAACACCAAAACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR CAA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTGCCCTCCAGTGGTTGTaGGTGGAACAGCAGCGGGGC +
Preference number: 5 (lower is better)
Translates to: LFMTQSILENKSRLGQHFALQWL*VEQQRG
Trigger: GCCCCGCTGCTGTTCCACCAACAACCACTGGAGGGC...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCACATGTTCCCACAGCTTaGGGGACTGAGCACTGGAAC +
Preference number: 5 (lower is better)
Translates to: AFSADESRLQRWQSTIESHVPTA*GTEHWN
Trigger: GTTCCAGTGCTCAGTCCCCAAAGCTGTGGGAACATG...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGCATGTTCCCACAGCTTaGGGGACTGAGCACTGGAAC +
Preference number: 5 (lower is better)
Translates to: LAFSADESRLQRWQSTIEHVPTA*GTEHWN
Trigger: GTTCCAGTGCTCAGTCCCCAAAGCTGTGGGAACATG...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp TGTCTGAGTAAAAGGCCGAGACATTCGGTTGACTGGGGAAGTCCTTCTGCATTAAGGCAGGAGAATCGCTaGAACCCAGGAAGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: CLSKRPRHSVDWGSPSALRQENR*NPGSGG
Trigger: ACCACCACTTCCTGGGTTCAAGCGATTCTCCTGCCT...TAATGCAGAAGGACTTCCCCAGTCAACCGAATGTCTCGGCCTTTTACTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp GTAGAAGCTGCCACTGAGCCTGACAAGAGTTGGTACTCAAAAATGCAGAATGAAGTGTCTCGCCCGGTTTaGGTGTTTCTGGTAGGCTGG +
Preference number: 5 (lower is better)
Translates to: VEAATEPDKSWYSKMQNEVSRPV*VFLVGW
Trigger: CCAGCCTACCAGAAACACCAAAACCGGGCGAGACAC...TTCATTCTGCATTTTTGAGTACCAACTCTTGTCAGGCTCAGTGGCAGCTTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp CACGCAATCCTAAAGAACTCATCTATGTCCCCCTTATCTCCCCTCATCTTATGTGGCCGAGACATTCGGTaGACTGGGGAAGTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: HAILKNSSMSPLSPLILCGRDIR*TGEVLL
Trigger: CAGAAGGACTTCCCCAGTCAACCGAATGTCTCGGCC...ACATAAGATGAGGGGAGATAAGGGGGACATAGATGAGTTCTTTAGGATTGCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS TCA 90 bp AGCTCTGAAGTGCCTGCACTGACATGTTCCCACAGCTTTGGGGACTaGGCACTGGAACTAAGGGTCTTCTGGAAACATCCTTTTCTGATT +
Preference number: 5 (lower is better)
Translates to: SSEVPALTCSHSFGD*ALELRVFWKHPFLI
Trigger: AATCAGAAAAGGATGTTTCCAGAAGACCCTTAGTTCCAGTGCTCAGTCCCCAAAGCTGTGGGAACATGTCAGTGCAGGCACTTCAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461997.5
ENST00000464682.2
ENST00000489288.7
ENST00000618250.4
ENST00000623153.1
CDS TCA 90 bp CTTCCTTCACAGACGATGACTCTGGGGTCTGGATATCAGGTGGAATaGACACATAAGGTAAGCTCTGAAGTGCCTGCACTGACATGTTCC +
Preference number: 5 (lower is better)
Translates to: LPSQTMTLGSGYQVE*THKVSSEVPALTCS
Trigger: GGAACATGTCAGTGCAGGCACTTCAGAGCTTACCTTATGTGTTCATTCCACCTGATATCCAGACCCCAGAGTCATCGTCTGTGAAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461997.5
ENST00000464682.2
ENST00000489288.7
ENST00000618250.4
ENST00000623153.1
CDS-3UTR CAA 90 bp CACGCAATCCTAAAGAACTCATCTATGTCCCCCTTATCTCCCCTCATCTTATGTCTGTTAGCCTTCGGGTaGGGGGATAGGCTCCAATTC +
Preference number: 5 (lower is better)
Translates to: HAILKNSSMSPLSPLILCLLAFG*GDRLQF
Trigger: GAATTGGAGCCTATCCCCCAACCCGAAGGCTAACAG...ACATAAGATGAGGGGAGATAAGGGGGACATAGATGAGTTCTTTAGGATTGCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTGTGTCTCGCCCGGTTTaGGTGTTTCTGGTAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LFMTQSILENKSRLGQHFVSRPV*VFLVGW
Trigger: CCAGCCTACCAGAAACACCAAAACCGGGCGAGACAC...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp AATCGCTTGAACCCAGGAAGTGGTGGTTGCAGTAAGGTGAGATCATACCACTGCTCCCTAAAACAGGGCTaGCTGCCCTTTCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: NRLNPGSGGCSKVRSYHCSLKQG*LPFLLL
Trigger: AAGAAGAAGAAAGGGCAGCAAGCCCTGTTTTAGGGA...GCAGTGGTATGATCTCACCTTACTGCAACCACCACTTCCTGGGTTCAAGCGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCATCCCTAAAACAGGGCTaGCTGCCCTTTCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: AFSADESRLQRWQSTIESSLKQG*LPFLLL
Trigger: AAGAAGAAGAAAGGGCAGCAAGCCCTGTTTTAGGGA...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTGGCCGAGACATTCGGTaGACTGGGGAAGTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: LFMTQSILENKSRLGQHFGRDIR*TGEVLL
Trigger: CAGAAGGACTTCCCCAGTCAACCGAATGTCTCGGCC...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp CTTGCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGATAAACTTCAAGGCTTaGGGGAGCACAGCCTCCTAT +
Preference number: 5 (lower is better)
Translates to: LAFSADESRLQRWQSTIEINFKA*GSTASY
Trigger: ATAGGAGGCTGTGCTCCCCAAAGCCTTGAAGTTTAT...CTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618250.4
CDS-3UTR CAA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCGATGCACAGCTGTGTTaGGGGCCCTCCAGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFDAQLC*GPSSGC
Trigger: ACAACCACTGGAGGGCCCCAAACACAGCTGTGCATC...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCAGTTAGATGTGGAAACTaGGAGGTGGTAGGTTTTCGA +
Preference number: 5 (lower is better)
Translates to: AFSADESRLQRWQSTIESVRCGN*EVVGFR
Trigger: TCGAAAACCTACCACCTCCAAGTTTCCACATCTAAC...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp GCCTTTTCAGCAGATGAGTCAAGGTTGCAGAGGTGGCAGTCAACCATAGAGTCAACCTTTATTCCATACTaGTCCTCGGGGGTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: AFSADESRLQRWQSTIESTFIPY*SSGVSL
Trigger: TAAAGACACCCCCGAGGACAAGTATGGAATAAAGGT...TGACTCTATGGTTGACTGCCACCTCTGCAACCTTGACTCATCTGCTGAAAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCCTGTTAGCCTTCGGGTaGGGGGATAGGCTCCAATTC +
Preference number: 5 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFLLAFG*GDRLQF
Trigger: GAATTGGAGCCTATCCCCCAACCCGAAGGCTAACAG...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCCATGTTCCCACAGCTTaGGGGACTGAGCACTGGAAC +
Preference number: 5 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFHVPTA*GTEHWN
Trigger: GTTCCAGTGCTCAGTCCCCAAAGCTGTGGGAACATG...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCAGGCAGGAGAATCGCTaGAACCCAGGAAGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFRQENR*NPGSGG
Trigger: ACCACCACTTCCTGGGTTCAAGCGATTCTCCTGCCT...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAAGATGCACAGCTGTGTTaGGGGCCCTCCAGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKDAQLC*GPSSGC
Trigger: ACAACCACTGGAGGGCCCCAAACACAGCTGTGCATC...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAAGTGTCTCGCCCGGTTTaGGTGTTTCTGGTAGGCTGG +
Preference number: 5 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKVSRPV*VFLVGW
Trigger: CCAGCCTACCAGAAACACCAAAACCGGGCGAGACAC...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAACTGTTAGCCTTCGGGTaGGGGGATAGGCTCCAATTC +
Preference number: 5 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKLLAFG*GDRLQF
Trigger: GAATTGGAGCCTATCCCCCAACCCGAAGGCTAACAG...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp ACAGGCGTAAGCCACAACACCTGGTCTAGATATAACTTATTTATCTTTAAACTTGTGTCTCGCCCGGTTTaGGTGTTTCTGGTAGGCTGG +
Preference number: 5 (lower is better)
Translates to: TGVSHNTWSRYNLFIFKLVSRPV*VFLVGW
Trigger: CCAGCCTACCAGAAACACCAAAACCGGGCGAGACAC...AAGTTTAAAGATAAATAAGTTATATCTAGACCAGGTGTTGTGGCTTACGCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR CAA 90 bp ACAGGCGTAAGCCACAACACCTGGTCTAGATATAACTTATTTATCTTTAAACTTCTGTTAGCCTTCGGGTaGGGGGATAGGCTCCAATTC +
Preference number: 5 (lower is better)
Translates to: TGVSHNTWSRYNLFIFKLLLAFG*GDRLQF
Trigger: GAATTGGAGCCTATCCCCCAACCCGAAGGCTAACAG...AAGTTTAAAGATAAATAAGTTATATCTAGACCAGGTGTTGTGGCTTACGCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535978.5
CDS-3UTR CAA 90 bp CTGTTCATGACACAAAGTATCTTAGAAAACAAATCTCGGCTGGGCCAGCACTTTACCTTTATTCCATACTaGTCCTCGGGGGTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: LFMTQSILENKSRLGQHFTFIPY*SSGVSL
Trigger: TAAAGACACCCCCGAGGACAAGTATGGAATAAAGGT...AAAGTGCTGGCCCAGCCGAGATTTGTTTTCTAAGATACTTTGTGTCATGAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCGTTAGATGTGGAAACTaGGAGGTGGTAGGTTTTCGA +
Preference number: 5 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFVRCGN*EVVGFR
Trigger: TCGAAAACCTACCACCTCCAAGTTTCCACATCTAAC...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCACCTTTATTCCATACTaGTCCTCGGGGGTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFTFIPY*SSGVSL
Trigger: TAAAGACACCCCCGAGGACAAGTATGGAATAAAGGT...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp AAGACCATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTGCCCTTTCTTCTTCTaGCCTTTTCAGCAGATGAGT +
Preference number: 5 (lower is better)
Translates to: KTISGWGNIAVLLMEAGFCPFFF*PFQQMS
Trigger: ACTCATCTGCTGAAAAGGCAAGAAGAAGAAAGGGCA...GAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAATGGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAAGTTAGATGTGGAAACTaGGAGGTGGTAGGTTTTCGA +
Preference number: 5 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKVRCGN*EVVGFR
Trigger: TCGAAAACCTACCACCTCCAAGTTTCCACATCTAAC...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS-3UTR CAA 90 bp ATTAGTGGATGGGGTAATATTGCTGTATTACTGATGGAAGCAGGATTCTCTAAATGCCCTTTCTTCTTCTaGCCTTTTCAGCAGATGAGT +
Preference number: 5 (lower is better)
Translates to: ISGWGNIAVLLMEAGFSKCPFFF*PFQQMS
Trigger: ACTCATCTGCTGAAAAGGCAAGAAGAAGAAAGGGCA...TTTAGAGAATCCTGCTTCCATCAGTAATACAGCAATATTACCCCATCCACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000618250.4
CDS GCA 72 bp CCTTCGGGTTGGGGGATAGGCTCCAATTCCAACCCATaGCATAGCCTCCACCTCTCGGCCTCAGGTGATCCT +
Preference number: 6 (lower is better)
Translates to: PSGWGIGSNSNP*HSLHLSASGDP
Trigger: AGGATCACCTGAGGCCGAGAGGTGGAGGCTATGGCATGGGTTGGAATTGGAGCCTATCCCCCAACCCGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366285.5
CDS CCA 72 bp GAGAATGTAGCAAGATTTCCCCGCTCAGGATGGGGATaGGTCGGAGGAGCCACTCTGGAAGTTTCCCGGGCA +
Preference number: 6 (lower is better)
Translates to: ENVARFPRSGWG*VGGATLEVSRA
Trigger: TGCCCGGGAAACTTCCAGAGTGGCTCCTCCGACCCATCCCCATCCTGAGCGGGGAAATCTTGCTACATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536063.1
CDS CAA 72 bp CCTCTGCCAGCCAATTCTACCATAAACTTCAAGGCTTaGGGGAGCACAGCCTCCTATACCAGCCCGGGCCGG +
Preference number: 6 (lower is better)
Translates to: PLPANSTINFKA*GSTASYTSPGR
Trigger: CCGGCCCGGGCTGGTATAGGAGGCTGTGCTCCCCAAAGCCTTGAAGTTTATGGTAGAATTGGCTGGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538700.2
ENST00000618250.4
CDS CCA 72 bp CCCGCTCAGGATGGGGATGGGTCGGAGGAGCCACTCTaGAAGTTTCCCGGGCAAGAAAGTGTTGGCAATAAT +
Preference number: 6 (lower is better)
Translates to: PAQDGDGSEEPL*KFPGQESVGNN
Trigger: ATTATTGCCAACACTTTCTTGCCCGGGAAACTTCCAGAGTGGCTCCTCCGACCCATCCCCATCCTGAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536063.1
CDS TCA 72 bp CTGTGGTCAATGGGCTTGCTGGGCACCTGTCGAGTGTaGGTGATGGGAAGCTGTGTAGATGCACAGCTGTGT +
Preference number: 6 (lower is better)
Translates to: LWSMGLLGTCRV*VMGSCVDAQLC
Trigger: ACACAGCTGTGCATCTACACAGCTTCCCATCACTCACACTCGACAGGTGCCCAGCAAGCCCATTGACCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366285.5
ENST00000489288.7
ENST00000535978.5
ENST00000538636.5
ENST00000538700.2
ENST00000618250.4
CDS GCA 72 bp CACCTGTCGAGTGTGAGTGATGGGAAGCTGTGTAGATaGACAGCTGTGTTTGGGGCCCTCCAGTGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: HLSSVSDGKLCR*TAVFGALQWLL
Trigger: CAACAACCACTGGAGGGCCCCAAACACAGCTGTGCATCTACACAGCTTCCCATCACTCACACTCGACAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366285.5
ENST00000489288.7
ENST00000535978.5
ENST00000538636.5
ENST00000538700.2
ENST00000618250.4
CDS CCA 72 bp CTCGGGGGTGTCTTTAACCAGAACAGGTCCAGGCTCTaGGCTATTAGGAGTGCCAGTGTGAAGAGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: LGGVFNQNRSRL*AIRSASVKSAA
Trigger: AGCTGCACTCTTCACACTGGCACTCCTAATAGCCCAGAGCCTGGACCTGTTCTGGTTAAAGACACCCCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000461997.5
ENST00000464682.2
ENST00000489288.7
ENST00000618250.4
ENST00000623153.1
CDS CAA 90 bp GCAAGCAGGTGCTGTCGTCTCCTCCATGTGACCTTTATTCCATACTaGTCCTCGGGGGTGTCTTTAACCAGAACAGGTCCAGGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: ASRCCRLLHVTFIPY*SSGVSLTRTGPGSG
Trigger: CCCAGAGCCTGGACCTGTTCTGGTTAAAGACACCCCCGAGGACAAGTATGGAATAAAGGTCACATGGAGGAGACGACAGCACCTGCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000461997.5
ENST00000464682.2
ENST00000489288.7
ENST00000618250.4
ENST00000623153.1
CDS GCA 72 bp TACCTGTCGAGTGTGAGTGATGGGAAGCTGTGTAGATaGACAGCTGTGTTTGGGGCCCTCCAGTGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: YLSSVSDGKLCR*TAVFGALQWLL
Trigger: CAACAACCACTGGAGGGCCCCAAACACAGCTGTGCATCTACACAGCTTCCCATCACTCACACTCGACAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461997.5
CDS CCA 72 bp GTTCTTGAGAATGTAGCAAGATTTCCCCGCTCAGGATaGGGATGGGTCGGAGGAGCCACTCTGGAAGTTTCC +
Preference number: 6 (lower is better)
Translates to: VLENVARFPRSG*GWVGGATLEVS
Trigger: GGAAACTTCCAGAGTGGCTCCTCCGACCCATCCCCATCCTGAGCGGGGAAATCTTGCTACATTCTCAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536063.1
CDS TCA 72 bp GTGCCTGCACTGACATGTTCCCACAGCTTTGGGGACTaGGCACTGGAACTAAGGGTCTTCTGGAAACATCCT +
Preference number: 6 (lower is better)
Translates to: VPALTCSHSFGD*ALELRVFWKHP
Trigger: AGGATGTTTCCAGAAGACCCTTAGTTCCAGTGCTCAGTCCCCAAAGCTGTGGGAACATGTCAGTGCAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461997.5
ENST00000464682.2
ENST00000489288.7
ENST00000618250.4
ENST00000623153.1
CDS CAA 72 bp ACAGTTAGTAACCACATGATGCTGTTAGCCTTCGGGTaGGGGGATAGGCTCCAATTCCAACCCATGCCAGCC +
Preference number: 6 (lower is better)
Translates to: TVSNHMMLLAFG*GDRLQFQPMPA
Trigger: GGCTGGCATGGGTTGGAATTGGAGCCTATCCCCCAACCCGAAGGCTAACAGCATCATGTGGTTACTAACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461997.5
ENST00000489288.7
ENST00000535978.5
CDS TCA 72 bp CAGACGATGACTCTGGGGTCTGGATATCAGGTGGAATaGACACATAAGGTAAGCTCTGAAGTGCCTGCACTG +
Preference number: 6 (lower is better)
Translates to: QTMTLGSGYQVE*THKVSSEVPAL
Trigger: CAGTGCAGGCACTTCAGAGCTTACCTTATGTGTTCATTCCACCTGATATCCAGACCCCAGAGTCATCGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461997.5
ENST00000464682.2
ENST00000489288.7
ENST00000618250.4
ENST00000623153.1
CDS CAA 72 bp TGCTGTCGTCTCCTCCATGTGACCTTTATTCCATACTaGTCCTCGGGGGTGTCTTTAACCAGAACAGGTCCA +
Preference number: 6 (lower is better)
Translates to: CCRLLHVTFIPY*SSGVSLTRTGP
Trigger: TGGACCTGTTCTGGTTAAAGACACCCCCGAGGACAAGTATGGAATAAAGGTCACATGGAGGAGACGACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000461997.5
ENST00000464682.2
ENST00000489288.7
ENST00000618250.4
ENST00000623153.1
CDS CAA 72 bp ACAGTTAGTAACCACATGATGCTGTTAGCCTTCGGGTaGGGGGATAGGCTCCAATTCCAACCCATGCCTGTA +
Preference number: 6 (lower is better)
Translates to: TVSNHMMLLAFG*GDRLQFQPMPV
Trigger: TACAGGCATGGGTTGGAATTGGAGCCTATCCCCCAACCCGAAGGCTAACAGCATCATGTGGTTACTAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538636.5
ENST00000538700.2
ENST00000618250.4
CDS TCA 72 bp CTGATCTTGGGGAATGAGTTCTTCCTTCACAGACGATaGCTCTGGGGTCTGGATATCAGGTGGAATGAACAC +
Preference number: 6 (lower is better)
Translates to: LILGNEFFLHRR*LWGLDIRWNEH
Trigger: GTGTTCATTCCACCTGATATCCAGACCCCAGAGTCATCGTCTGTGAAGGAAGAACTCATTCCCCAAGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461997.5
ENST00000464682.2
ENST00000489288.7
ENST00000618250.4
ENST00000623153.1
CDS CAA 72 bp AGGAGCCACTCTGGAAGTTTCCCGGGCAAGAAAGTGTaGGCAATAATAATAACGGGCTGGTCAGGAAGTAGA +
Preference number: 6 (lower is better)
Translates to: RSHSGSFPGKKV*AIIITGWSGSR
Trigger: TCTACTTCCTGACCAGCCCGTTATTATTATTGCCAACACTTTCTTGCCCGGGAAACTTCCAGAGTGGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536063.1
CDS CAA 90 bp ATGGGTCGGAGGAGCCACTCTGGAAGTTTCCCGGGCAAGAAAGTGTaGGCAATAATAATAACGGGCTGGTCAGGAAGTAGAAGAGAAAAT +
Preference number: 6 (lower is better)
Translates to: MGRRSHSGSFPGKKV*AIIITGWSGSRREN
Trigger: ATTTTCTCTTCTACTTCCTGACCAGCCCGTTATTATTATTGCCAACACTTTCTTGCCCGGGAAACTTCCAGAGTGGCTCCTCCGACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536063.1
CDS CAA 72 bp GAAGATTGCGGACTCTCAAAAGTTAGATGTGGAAACTaGGAGGTGGTAGGTTTTCGACTTGAGTGTCTCGCC +
Preference number: 6 (lower is better)
Translates to: EDCGLSKVRCGN*EVVGFRLECLA
Trigger: GGCGAGACACTCAAGTCGAAAACCTACCACCTCCAAGTTTCCACATCTAACTTTTGAGAGTCCGCAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461997.5
ENST00000464682.2
ENST00000489288.7
ENST00000536063.1
ENST00000538636.5
ENST00000538700.2
ENST00000618250.4
CDS TCA 72 bp TTAGATATCCTGTGGAAAAAGAGGAATAATATCTACTaGTTGATGCGGGGAGAGAGGGAAGCCTGGAAAGAT +
Preference number: 6 (lower is better)
Translates to: LDILWKKRNNIY*LMRGEREAWKD
Trigger: ATCTTTCCAGGCTTCCCTCTCTCCCCGCATCAATCAGTAGATATTATTCCTCTTTTTCCACAGGATATCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536063.1