Pregenerated sensors for RHEX (Homo sapiens)
Ensembl gene IDs: ENSG00000263961Ensembl transcript IDs: ENST00000331555.10, ENST00000582070.3, ENST00000603378.5, ENST00000603488.5, ENST00000604112.1
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACTCCATAGTTCTCATACTTTACCTGAAAGTTCTTCCTAACATCTaGTCTCAACCTTTCTTGCCGGGGCATTGGCCTGTTTTCCCAGCC | + |
|
Preference number: 1 (lower is better) Translates to: DSIVLILYLKVLPNI*SQPFLPGHWPVFPA Trigger: GGCTGGGAAAACAGGCCAATGCCCCGGCAAGAAAGGTTGAGATCAGATGTTAGGAAGAACTTTCAGGTAAAGTATGAGAACTATGGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAATTCTTGCCGGGGCATTaGCCTGTTTTCCCAGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQFLPGH*PVFPAK Trigger: CTTGGCTGGGAAAACAGGCCAATGCCCCGGCAAGAA...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| 3UTR-3UTR CCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTTTCTTGCCGGGGCATTaGCCTGTTTTCCCAGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFFLPGH*PVFPAK Trigger: CTTGGCTGGGAAAACAGGCCAATGCCCCGGCAAGAA...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| 3UTR-3UTR TCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAAGTTCTTCCTAACATCTaGTCTCAACCTTTCTTGCCG | + |
|
Preference number: 2 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQVLPNI*SQPFLP Trigger: CGGCAAGAAAGGTTGAGATCAGATGTTAGGAAGAAC...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| 3UTR-3UTR TCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTGTTCTTCCTAACATCTaGTCTCAACCTTTCTTGCCG | + |
|
Preference number: 2 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFVLPNI*SQPFLP Trigger: CGGCAAGAAAGGTTGAGATCAGATGTTAGGAAGAAC...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAATTTCTTGCCGGGGCATaGGCCTGTTTTCCCAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQFLAGA*ACFPSQ Trigger: TTGGCTGGGAAAACAGGCCAATGCCCCGGCAAGAAA...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| 3UTR-3UTR CAA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTTTTCTTGCCGGGGCATaGGCCTGTTTTCCCAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFFLAGA*ACFPSQ Trigger: TTGGCTGGGAAAACAGGCCAATGCCCCGGCAAGAAA...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAAGAACGAACAGCTTTTTaGGGTACAGACCAGGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQERTAF*GTDQES Trigger: GGACTCCTGGTCTGTACCCAAAAAAGCTGTTCGTTC...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| 3UTR-3UTR CAA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTGAACGAACAGCTTTTTaGGGTACAGACCAGGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFERTAF*GTDQES Trigger: GGACTCCTGGTCTGTACCCAAAAAAGCTGTTCGTTC...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAAAGCCAAGCCTTGTTTTaGTTTTTGAGGAACGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQSQALF*FLRNEQ Trigger: CTGTTCGTTCCTCAAAAACAAAAACAAGGCTTGGCT...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAAGGCCAGGGCTGGGCCTaGGAACCTGGAGACTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQGQGWA*EPGDWP Trigger: CGGCCAGTCTCCAGGTTCCCAGGCCCAGCCCTGGCC...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR TCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTTTGACAGCAGGTGGATaGTGGTGGCCAGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFLTAGG*WWPGLG Trigger: GCCCAGCCCTGGCCACCATCATCCACCTGCTGTCAA...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAAGTGAGGAAGCAGGCCTaGAGGAAGAGGGACACCACC | + |
|
Preference number: 4 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQVRKQA*RKRDTT Trigger: GGTGGTGTCCCTCTTCCTGCAGGCCTGCTTCCTCAC...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAAGTGCCACCGGCAGGGTaGTGGAGATCTGCAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQVPPAG*WRSARG Trigger: ACCTCTTGCAGATCTCCAGCACCCTGCCGGTGGCAC...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582070.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAAAATCCACATCCTCTGTaGCCTGGCAGGCAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQNPHPL*PGRQEA Trigger: CGCCTCCTGCCTGCCAGGCCACAGAGGATGTGGATT...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR GCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTGTGAGGAAGCAGGCCTaGAGGAAGAGGGACACCACC | + |
|
Preference number: 4 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFVRKQA*RKRDTT Trigger: GGTGGTGTCCCTCTTCCTGCAGGCCTGCTTCCTCAC...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTCTGGGCCTGGGAACCTaGAGACTGGCCGCTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFLGLGT*RLAAFS Trigger: ACTGAAAGCGGCCAGTCTCCAGGTTCCCAGGCCCAG...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTACATCCTCTGTGGCCTaGCAGGCAGGAGGCGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFTSSVA*QAGGEL Trigger: CAGTTCGCCTCCTGCCTGCCAGGCCACAGAGGATGT...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTAATCCACATCCTCTGTaGCCTGGCAGGCAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFNPHPL*PGRQEA Trigger: CGCCTCCTGCCTGCCAGGCCACAGAGGATGTGGATT...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCACCGGCAGGGTGCTaGAGATCTGCAAGAGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQPPAGC*RSARGK Trigger: CTTACCTCTTGCAGATCTCCAGCACCCTGCCGGTGG...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582070.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACTCTTTGACAGCAGGTaGATGATGGTGGCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQLFDSR*MMVARA Trigger: AGCCCTGGCCACCATCATCCACCTGCTGTCAAAGAG...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR GCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTGTGCCACCGGCAGGGTaGTGGAGATCAAGTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFVPPAG*WRSSFR Trigger: TCTGAAACTTGATCTCCAGCACCCTGCCGGTGGCAC...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331555.10 |
||
| CDS-3UTR TCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTGCTATCCAAGCTATCTaGGGGTGTGTCGCTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFAIQAI*GCVAVM Trigger: CATGACAGCGACACACCCTCAGATAGCTTGGATAGC...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAAGCGATCACTAAGCCATaGCAGACCTCCATGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQAITKP*QTSMTS Trigger: AGAAGTCATGGAGGTCTGGCATGGCTTAGTGATCGC...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR GCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTAGGCAGGAGGCGAACTaGAGGAGCTATCCAAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFRQEAN*RSYPSY Trigger: ATAGCTTGGATAGCTCCTGCAGTTCGCCTCCTGCCT...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTCCACCGGCAGGGTGCTaGAGATCAAGTTTCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFPPAGC*RSSFRC Trigger: ACATCTGAAACTTGATCTCCAGCACCCTGCCGGTGG...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331555.10 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAATCCTTGCTGATAAGTTaGGGCTCAGGCACTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQSLLIS*GSGTFR Trigger: CCTGAAAGTGCCTGAGCCCCAACTTATCAGCAAGGA...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAATGGGAACCTGGAGACTaGCCGCTTTCAGTATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQWEPGD*PLSVSV Trigger: AACAGATACTGAAAGCGGCCAGTCTCCAGGTTCCCA...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR TCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACAGACAGAGCAGGGTTaGCAAAATACCAGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQQTEQG*QNTRNW Trigger: CCAGTTTCTGGTATTTTGTCAACCCTGCTCTGTCTG...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR TCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAAATTCACATGGCCACTTaGTCATATTCCGCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQIHMAT*SYSAGS Trigger: TGAGCCAGCGGAATATGATCAAGTGGCCATGTGAAT...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTTCCTTGCTGATAAGTTaGGGCTCAGGCACTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFSLLIS*GSGTFR Trigger: CCTGAAAGTGCCTGAGCCCCAACTTATCAGCAAGGA...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR TCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTTCTCCTTCATCTCTTTaGCAGCAGGTGGATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFSPSSL*QQVDDG Trigger: ACCATCATCCACCTGCTGTCAAAGAGATGAAGGAGA...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR TCA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTCAGACAGAGCAGGGTTaGCAAAATACCAGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFQTEQG*QNTRNW Trigger: CCAGTTTCTGGTATTTTGTCAACCCTGCTCTGTCTG...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAAAAGGGAATCAGACATTaGGATGTCTCTCTCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQKGIRH*DVSLCL Trigger: CAGACAGAGAGAGACATCCCAATGTCTGATTCCCTT...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACAAAATACCAGAAACTaGGCTTGTGTCTTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQQNTRN*ACVFLD Trigger: ATCCAGAAAGACACAAGCCCAGTTTCTGGTATTTTG...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| 3UTR CAA 72 bp | TTAAAGAGCTCAAAGGGAAGTCATTTAACCATGAGATaGCCAAATAGAACTCTACAACAGCTGATTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LKSSKGSHLTMR*PNRTLQQLIQP Trigger: AGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCCCTTTGAGCTCTTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS GCA 90 bp | GGAACCACCCTGGCACCTCGTCTCTCAGTAGTGCCACCGGCAGGGTaGTGGAGATCTGCAAGAGGTAAGGAGCTGGTCAGGACTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GTTLAPRLSVVPPAG*WRSARGKELVRTPG Trigger: CCCTGGAGTCCTGACCAGCTCCTTACCTCTTGCAGATCTCCAGCACCCTGCCGGTGGCACTACTGAGAGACGAGGTGCCAGGGTGGTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604112.1 |
||
| CDS CCA 90 bp | ACCACCCTGGCACCTCGTCTCTCAGTAGTGCCACCGGCAGGGTGCTaGAGATCTGCAAGAGGTAAGGAGCTGGTCAGGACTCCAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TTLAPRLSVVPPAGC*RSARGKELVRTPGL Trigger: GAGCCCTGGAGTCCTGACCAGCTCCTTACCTCTTGCAGATCTCCAGCACCCTGCCGGTGGCACTACTGAGAGACGAGGTGCCAGGGTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604112.1 |
||
| CDS GCA 90 bp | GGAACCACCCTGGCACCTCGTCTCTCAGTAGTGCCACCGGCAGGGTaGTGGAGATCAAGTTTCAGATGTCCGGACTCCAAGTGCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTTLAPRLSVVPPAG*WRSSFRCPDSKCQF Trigger: GAACTGGCACTTGGAGTCCGGACATCTGAAACTTGATCTCCAGCACCCTGCCGGTGGCACTACTGAGAGACGAGGTGCCAGGGTGGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331555.10 |
||
| CDS CCA 90 bp | ACCACCCTGGCACCTCGTCTCTCAGTAGTGCCACCGGCAGGGTGCTaGAGATCAAGTTTCAGATGTCCGGACTCCAAGTGCCAGTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TTLAPRLSVVPPAGC*RSSFRCPDSKCQFL Trigger: AAGGAACTGGCACTTGGAGTCCGGACATCTGAAACTTGATCTCCAGCACCCTGCCGGTGGCACTACTGAGAGACGAGGTGCCAGGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331555.10 |
||
| CDS TCA 90 bp | GAGCGGTGGGAAGGAATTTGGCCGGTGGGTCCTCTGGTAGGTTTTTaGGTGACGTTTGGGAACTCCAAAGGGGTCTTGTCCTGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ERWEGIWPVGPLVGF*VTFGNSKGVLSCWR Trigger: CCTCCAGCAGGACAAGACCCCTTTGGAGTTCCCAAACGTCACTCAAAAACCTACCAGAGGACCCACCGGCCAAATTCCTTCCCACCGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604112.1 |
||
| CDS CCA 90 bp | ACCTCCATGACTTCTGTCAGCATGATGAGCTCCTTGCTGATAAGTTaGGGCTCAGGCACTTTCAGGAACCACCCTGGCACCTCGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSMTSVSMMSSLLIS*GSGTFRNHPGTSSL Trigger: GAGAGACGAGGTGCCAGGGTGGTTCCTGAAAGTGCCTGAGCCCCAACTTATCAGCAAGGAGCTCATCATGCTGACAGAAGTCATGGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331555.10 ENST00000582070.3 ENST00000603378.5 ENST00000603488.5 ENST00000604112.1 |
||
| CDS CCA 90 bp | AGGAATTTGGCCGGTGGGTCCTCTGGTAGGTTTTTGAGTGACGTTTaGGAACTCCAAAGGGGTCTTGTCCTGCTGGAGGCTCGAGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: RNLAGGSSGRFLSDV*ELQRGLVLLEAREW Trigger: CCATTCTCGAGCCTCCAGCAGGACAAGACCCCTTTGGAGTTCCCAAACGTCACTCAAAAACCTACCAGAGGACCCACCGGCCAAATTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604112.1 |
||
| CDS TCA 90 bp | GCCACCGGCAGGGTGCTGGAGATCCTTAGGACTATGAGCACAGTTTaGTCCCAGTCTGTGTTTCAGCGATGTCCTAACGGAAATATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ATGRVLEILRTMSTV*SQSVFQRCPNGNIS Trigger: GGAGATATTTCCGTTAGGACATCGCTGAAACACAGACTGGGATCAAACTGTGCTCATAGTCCTAAGGATCTCCAGCACCCTGCCGGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603378.5 ENST00000603488.5 |
||
| CDS CCA 90 bp | TGGGTAGTAGACGGATGTGGATGGCCACTTCCAGCCAGAAATAGTTaGTTAAAAGGTGAGGTCAGAGTGGGGATTACCCAGATACAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: WVVDGCGWPLPARNS*LKGEVRVGITQIQL Trigger: TAACTGTATCTGGGTAATCCCCACTCTGACCTCACCTTTTAACCAACTATTTCTGGCTGGAAGTGGCCATCCACATCCGTCTACTACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604112.1 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACTCCTTGCTGATAAGTaGGGGCTCAGGCACTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQLLADK*GLRHFQ Trigger: CTGAAAGTGCCTGAGCCCCAACTTATCAGCAAGGAG...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAAAGTATCTGTTCACTCTaGTGGGCCATGTGCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQSICSL*WAMCLL Trigger: CAGCAGGCACATGGCCCACAAGAGTGAACAGATACT...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS CCA 90 bp | ATTAAAAATATTTGGAATTCACATGGCCACTTGATCATATTCCGCTaGCTCAGACAGAGCAGGGTTGACAAAATACCAGAAACTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IKNIWNSHGHLIIFR*LRQSRVDKIPETGL Trigger: AAGCCCAGTTTCTGGTATTTTGTCAACCCTGCTCTGTCTGAGCCAGCGGAATATGATCAAGTGGCCATGTGAATTCCAAATATTTTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000331555.10 ENST00000582070.3 ENST00000603378.5 ENST00000603488.5 |
||
| CDS-3UTR CAA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTAGCATGATGAGCTCCTaGCTGATAAGTTGGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFSMMSS*LISWGS Trigger: TGAGCCCCAACTTATCAGCAAGGAGCTCATCATGCT...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAAGTCAGAAAAGACGACTaGTGTGTAATCCACATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQVRKDD*CVIHIL Trigger: GAGGATGTGGATTACACACAAGTCGTCTTTTCTGAC...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAATACCAGAAACTGGGCTaGTGTCTTTCTGGATTGACA | + |
|
Preference number: 5 (lower is better) Translates to: GSHLTMRLPNRTLQQLIQYQKLG*CLSGLT Trigger: TGTCAATCCAGAAAGACACAAGCCCAGTTTCTGGTA...TTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATGACTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CAA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTAATTCACATGGCCACTaGATCATATTCCGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFNSHGH*IIFRWL Trigger: GAGCCAGCGGAATATGATCAAGTGGCCATGTGAATT...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS CCA 90 bp | TTAAATGTAAGAATCCATAGAGAACTGGACCCCATTAAAAATATTTaGAATTCACATGGCCACTTGATCATATTCCGCTGGCTCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: LNVRIHRELDPIKNI*NSHGHLIIFRWLRQ Trigger: CTGTCTGAGCCAGCGGAATATGATCAAGTGGCCATGTGAATTCCAAATATTTTTAATGGGGTCCAGTTCTCTATGGATTCTTACATTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000331555.10 ENST00000582070.3 ENST00000603378.5 |
||
| CDS-3UTR CAA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTGTCAGAAAAGACGACTaGTGTGTAATCCACATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFVRKDD*CVIHIL Trigger: GAGGATGTGGATTACACACAAGTCGTCTTTTCTGAC...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CAA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTTACCAGAAACTGGGCTaGTGTCTTTCTGGATTGACA | + |
|
Preference number: 5 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFYQKLG*CLSGLT Trigger: TGTCAATCCAGAAAGACACAAGCCCAGTTTCTGGTA...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS-3UTR CAA 90 bp | CATTTAACCATGAGATTGCCAAATAGAACTCTACAACAGCTGATTCAACCTTTTAGCCAAGCCTTGTTTTaGTTTTTGAGGAACGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: HLTMRLPNRTLQQLIQPFSQALF*FLRNEQ Trigger: CTGTTCGTTCCTCAAAAACAAAAACAAGGCTTGGCT...AAAAGGTTGAATCAGCTGTTGTAGAGTTCTATTTGGCAATCTCATGGTTAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000331555.10 ENST00000582070.3 |
||
| CDS GCA 72 bp | CTGGCACCTCGTCTCTCAGTAGTGCCACCGGCAGGGTaGTGGAGATCTGCAAGAGGTAAGGAGCTGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LAPRLSVVPPAG*WRSARGKELVR Trigger: CCTGACCAGCTCCTTACCTCTTGCAGATCTCCAGCACCCTGCCGGTGGCACTACTGAGAGACGAGGTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582070.3 ENST00000604112.1 |
||
| CDS CCA 72 bp | GCACCTCGTCTCTCAGTAGTGCCACCGGCAGGGTGCTaGAGATCTGCAAGAGGTAAGGAGCTGGTCAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: APRLSVVPPAGC*RSARGKELVRT Trigger: AGTCCTGACCAGCTCCTTACCTCTTGCAGATCTCCAGCACCCTGCCGGTGGCACTACTGAGAGACGAGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582070.3 ENST00000604112.1 |
||
| CDS GCA 72 bp | CTGGCACCTCGTCTCTCAGTAGTGCCACCGGCAGGGTaGTGGAGATCAAGTTTCAGATGTCCGGACTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LAPRLSVVPPAG*WRSSFRCPDSK Trigger: CTTGGAGTCCGGACATCTGAAACTTGATCTCCAGCACCCTGCCGGTGGCACTACTGAGAGACGAGGTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331555.10 |
||
| CDS CCA 72 bp | GCACCTCGTCTCTCAGTAGTGCCACCGGCAGGGTGCTaGAGATCAAGTTTCAGATGTCCGGACTCCAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: APRLSVVPPAGC*RSSFRCPDSKC Trigger: GCACTTGGAGTCCGGACATCTGAAACTTGATCTCCAGCACCCTGCCGGTGGCACTACTGAGAGACGAGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331555.10 |
||
| CDS CAA 90 bp | GGAGCGGTGGGAAGGAATTTGGCCGGTGGGTCCTCTGGTAGGTTTTaGAGTGACGTTTGGGAACTCCAAAGGGGTCTTGTCCTGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GAVGRNLAGGSSGRF*SDVWELQRGLVLLE Trigger: CTCCAGCAGGACAAGACCCCTTTGGAGTTCCCAAACGTCACTCAAAAACCTACCAGAGGACCCACCGGCCAAATTCCTTCCCACCGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604112.1 |
||
| CDS CCA 72 bp | GCCGGTGGGTCCTCTGGTAGGTTTTTGAGTGACGTTTaGGAACTCCAAAGGGGTCTTGTCCTGCTGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AGGSSGRFLSDV*ELQRGLVLLEA Trigger: AGCCTCCAGCAGGACAAGACCCCTTTGGAGTTCCCAAACGTCACTCAAAAACCTACCAGAGGACCCACCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604112.1 |
||
| CDS GCA 72 bp | TGCAGGAAGAGGGACACCACCGCGATCACTAAGCCATaGCAGACCTCCATGACTTCTGTCAGCATGATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CRKRDTTAITKP*QTSMTSVSMMS Trigger: GCTCATCATGCTGACAGAAGTCATGGAGGTCTGGCATGGCTTAGTGATCGCGGTGGTGTCCCTCTTCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331555.10 ENST00000582070.3 ENST00000603378.5 ENST00000603488.5 ENST00000604112.1 |
||
| CDS CAA 90 bp | GACCTCCATGACTTCTGTCAGCATGATGAGCTCCTTGCTGATAAGTaGGGGCTCAGGCACTTTCAGGAACCACCCTGGCACCTCGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DLHDFCQHDELLADK*GLRHFQEPPWHLVS Trigger: AGAGACGAGGTGCCAGGGTGGTTCCTGAAAGTGCCTGAGCCCCAACTTATCAGCAAGGAGCTCATCATGCTGACAGAAGTCATGGAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000331555.10 ENST00000582070.3 ENST00000603378.5 ENST00000603488.5 ENST00000604112.1 |
||
| CDS CCA 72 bp | ACTTCTGTCAGCATGATGAGCTCCTTGCTGATAAGTTaGGGCTCAGGCACTTTCAGGAACCACCCTGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: TSVSMMSSLLIS*GSGTFRNHPGT Trigger: GGTGCCAGGGTGGTTCCTGAAAGTGCCTGAGCCCCAACTTATCAGCAAGGAGCTCATCATGCTGACAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331555.10 ENST00000582070.3 ENST00000603378.5 ENST00000603488.5 ENST00000604112.1 |
||
| CDS CCA 72 bp | CGGCAGGGTGCTGGAGATCTGCAAGAGGTAAGGAGCTaGTCAGGACTCCAGGGCTCTTTATACAAATTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RQGAGDLQEVRS*SGLQGSLYKFP Trigger: GGGAAATTTGTATAAAGAGCCCTGGAGTCCTGACCAGCTCCTTACCTCTTGCAGATCTCCAGCACCCTGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604112.1 |
||
| CDS CAA 72 bp | GACTTCTGTCAGCATGATGAGCTCCTTGCTGATAAGTaGGGGCTCAGGCACTTTCAGGAACCACCCTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: DFCQHDELLADK*GLRHFQEPPWH Trigger: GTGCCAGGGTGGTTCCTGAAAGTGCCTGAGCCCCAACTTATCAGCAAGGAGCTCATCATGCTGACAGAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000331555.10 ENST00000582070.3 ENST00000603378.5 ENST00000603488.5 ENST00000604112.1 |
||
| CDS TCA 72 bp | GAAGGAATTTGGCCGGTGGGTCCTCTGGTAGGTTTTTaGGTGACGTTTGGGAACTCCAAAGGGGTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: EGIWPVGPLVGF*VTFGNSKGVLS Trigger: GGACAAGACCCCTTTGGAGTTCCCAAACGTCACTCAAAAACCTACCAGAGGACCCACCGGCCAAATTCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604112.1 |
||
| CDS CAA 72 bp | GGAAGGAATTTGGCCGGTGGGTCCTCTGGTAGGTTTTaGAGTGACGTTTGGGAACTCCAAAGGGGTCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GRNLAGGSSGRF*SDVWELQRGLV Trigger: GACAAGACCCCTTTGGAGTTCCCAAACGTCACTCAAAAACCTACCAGAGGACCCACCGGCCAAATTCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604112.1 |
||
| CDS CAA 72 bp | CAGACCTCCATGACTTCTGTCAGCATGATGAGCTCCTaGCTGATAAGTTGGGGCTCAGGCACTTTCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QTSMTSVSMMSS*LISWGSGTFRN Trigger: GTTCCTGAAAGTGCCTGAGCCCCAACTTATCAGCAAGGAGCTCATCATGCTGACAGAAGTCATGGAGGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000331555.10 ENST00000582070.3 ENST00000603378.5 ENST00000603488.5 ENST00000604112.1 |
||
| CDS TCA 72 bp | AGGGTGCTGGAGATCCTTAGGACTATGAGCACAGTTTaGTCCCAGTCTGTGTTTCAGCGATGTCCTAACGGA | + |
|
Preference number: 6 (lower is better) Translates to: RVLEILRTMSTV*SQSVFQRCPNG Trigger: TCCGTTAGGACATCGCTGAAACACAGACTGGGATCAAACTGTGCTCATAGTCCTAAGGATCTCCAGCACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603378.5 ENST00000603488.5 |
||
| CDS CCA 72 bp | TCTAGGCAGAAGGTCTGGGTAGTAGACGGATGTGGATaGCCACTTCCAGCCAGAAATAGTTGGTTAAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SRQKVWVVDGCG*PLPARNSWLKG Trigger: ACCTTTTAACCAACTATTTCTGGCTGGAAGTGGCCATCCACATCCGTCTACTACCCAGACCTTCTGCCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604112.1 |
||
| CDS CCA 72 bp | ATTTGGAATTCACATGGCCACTTGATCATATTCCGCTaGCTCAGACAGAGCAGGGTTGACAAAATACCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: IWNSHGHLIIFR*LRQSRVDKIPE Trigger: TTCTGGTATTTTGTCAACCCTGCTCTGTCTGAGCCAGCGGAATATGATCAAGTGGCCATGTGAATTCCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000331555.10 ENST00000582070.3 ENST00000603378.5 ENST00000603488.5 |
||