RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RHBG (Homo sapiens)

Ensembl gene IDs: ENSG00000132677

Ensembl transcript IDs: ENST00000451864.6, ENST00000467375.2, ENST00000494874.1, ENST00000537040.6, ENST00000612897.4, ENST00000613460.4, ENST00000618120.4, ENST00000620376.4, ENST00000622297.1

Found 590 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACCATTTCCCAGCCTCCTGTTGCCCCTCTCCCTGTGGAGACGCTaGCTGTGGAAAGGGGCCTCCTTCTGGCTCATGGCTCCCTTCTTG +
Preference number: 1 (lower is better)
Translates to: PPFPSLLLPLSLWRR*LWKGASFWLMAPFL
Trigger: CAAGAAGGGAGCCATGAGCCAGAAGGAGGCCCCTTTCCACAGGCAGCGTCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAAATGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 90 bp AACAGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTaGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCG +
Preference number: 1 (lower is better)
Translates to: NSPKSWCMACDVALR*PSAMSGNTLSRPSP
Trigger: CGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 90 bp CCGCCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTaGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTATG +
Preference number: 1 (lower is better)
Translates to: PPTEANISVTNSPKS*CMACDVALRWPSAM
Trigger: CATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 90 bp TTTCCCAGCCTCCTGTTGCCCCTCTCCCTGTGGAGACGCTGCCTGTaGAAAGGGGCCTCCTTCTGGCTCATGGCTCCCTTCTTGCAGCTG +
Preference number: 1 (lower is better)
Translates to: FPSLLLPLSLWRRCL*KGASFWLMAPFLQL
Trigger: CAGCTGCAAGAAGGGAGCCATGAGCCAGAAGGAGGCCCCTTTCCACAGGCAGCGTCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR TCA 90 bp GCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTATaGGTGGAAACACACTCTCCAGGCCATCTCCGTAAGCTTCATGGG +
Preference number: 1 (lower is better)
Translates to: AGAWPVTWHCAGPRL*VETHSPGHLRKLHG
Trigger: CCCATGAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR GCA 90 bp GAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTaGCTCCTCCACCCTCAGAGGTCTCTGGGCTTTATCCTCATGCTC +
Preference number: 1 (lower is better)
Translates to: ERVLSGAGSGLGLSV*LLHPQRSLGFILML
Trigger: GAGCATGAGGATAAAGCCCAGAGACCTCTGAGGGTGGAGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR GCA 90 bp TCATGGCGAAGAGGTCTGAATGGTAGACGGAGCCCTGGCGGTGCTTaGTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGA +
Preference number: 1 (lower is better)
Translates to: SWRRGLNGRRSPGGA*SSPAGACTEPAKGR
Trigger: TCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCTCCGTCTACCATTCAGACCTCTTCGCCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR GCA 90 bp CCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTaGATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTATGAGT +
Preference number: 1 (lower is better)
Translates to: PTEANISVTNSPKSW*MACDVALRWPSAMS
Trigger: ACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR GCA 90 bp CCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTaGAGGCTGGTAGGGCAGTCGGGTTGGGCATCTGGTGAGGTTCCC +
Preference number: 1 (lower is better)
Translates to: PVDHLGASIWPLLPM*RLVGQSGWASGEVP
Trigger: GGGAACCTCACCAGATGCCCAACCCGACTGCCCTACCAGCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 90 bp TCAGCATTGATCATGCTCTCCACGCCAACATGGATGTGGCCACCGTaGAAGGAGTGGAGAAAGCCCTGGACCAGTGTGGACCACTGCAGG +
Preference number: 1 (lower is better)
Translates to: SALIMLSTPTWMWPP*KEWRKPWTSVDHCR
Trigger: CCTGCAGTGGTCCACACTGGTCCAGGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAGCATGATCAATGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR TCA 90 bp AAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCTGTaGCGTGGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACT +
Preference number: 1 (lower is better)
Translates to: KHQCDKQPEELVHGL*RGTALALGYEWKHT
Trigger: AGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR TCA 90 bp TTGGATGTGGACCATGTCAAGCCTCCCATCTTCCCCTACAAGGGCTaGCAAGGCAAAGGTGCCAAGGGTGCTGGCAGCCAGGGAGTAGTA +
Preference number: 1 (lower is better)
Translates to: LDVDHVKPPIFPYKG*QGKGAKGAGSQGVV
Trigger: TACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTGCCTTGTCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 90 bp CAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTaGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCA +
Preference number: 1 (lower is better)
Translates to: QAWLGLHCNCVTWGQ*ITWVPQFGLFYPCA
Trigger: TGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 90 bp ACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTaGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTAC +
Preference number: 1 (lower is better)
Translates to: TLNQAWLGLHCNCVT*GQWITWVPQFGLFY
Trigger: GTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR TCA 90 bp TTATCACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTaGCGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCT +
Preference number: 1 (lower is better)
Translates to: LSPSTRPGLGFTVTV*RGASGSLGCLNLAS
Trigger: AGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 90 bp GGGGCCTCCTTCTGGCTCATGGCTCCCTTCTTGCAGCTGGAGGAATaGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTT +
Preference number: 1 (lower is better)
Translates to: GASFWLMAPFLQLEE*ELKKNFLVAASQHL
Trigger: AAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGAGCCAGAAGGAGGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 90 bp AGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTaGACTTTGAATTTTGATTCAAGGATGGGCATGTCAAGCCTCCCA +
Preference number: 1 (lower is better)
Translates to: RTPGIPWRLWTPHVS*TLNFDSRMGMSSLP
Trigger: TGGGAGGCTTGACATGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451864.6
3UTR TCA 90 bp CCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGACTTTaGATTTTGATTCAAGGATGGGCATGTCAAGCCTCCCATCTTCCC +
Preference number: 1 (lower is better)
Translates to: PASHGGCGLHMCLGL*ILIQGWACQASHLP
Trigger: GGGAAGATGGGAGGCTTGACATGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451864.6
3UTR CCA 90 bp AGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTaGACTTTGAATTTTGATTCAAGGATGGGCGTGAAGAACTTGTAC +
Preference number: 1 (lower is better)
Translates to: RTPGIPWRLWTPHVS*TLNFDSRMGVKNLY
Trigger: GTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp CCCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGATTGAGGGCCGTCCGATaGTGCCCAGCCCCCAGCGCT +
Preference number: 2 (lower is better)
Translates to: PPGPPASHGGCGLHMCLGLRAVR*CPAPSA
Trigger: AGCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAA...TCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTCCACCCTCAGCCGGCATCTCTCACCTaGGGAGGTGGGGTGAGAGGC +
Preference number: 2 (lower is better)
Translates to: LSGAGSGLGLSVCLLHPQPASLT*GGGVRG
Trigger: GCCTCTCACCCCACCTCCCCAGGTGAGAGATGCCGG...CTGAGGGTGGAGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451864.6
ENST00000620376.4
3UTR-3UTR CCA 90 bp GGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCGCATGGCCTGTGACGTaGCACTGCGCTGGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: GTALALGYEWKHTLQAISAWPVT*HCAGPR
Trigger: CCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGC...GGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp TTGAGGGCCGTCCGATGCTGCCCAGCCCCCAGCGCTGTGAGTGCAGCATTGAAGACCAGTGTGGACCACTaGAGGGCAAAGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: LRAVRCCPAPSAVSAALKTSVDH*RAKAAR
Trigger: CCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGT...CTTCAATGCTGCACTCACAGCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTCCCCAGCGCTGTGAGTaGAGCATTGAAGCTAGGCCA +
Preference number: 2 (lower is better)
Translates to: SPKSWCMACDVALRWPSAPQRCE*SIEARP
Trigger: TGGCCTAGCTTCAATGCTGCACTCACAGCGCTGGGG...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTCAAAGGTGCCAAGGGTaGTGGCAGCCAGGGAGTAGT +
Preference number: 2 (lower is better)
Translates to: SPKSWCMACDVALRWPSAQRCQG*WQPGSS
Trigger: ACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTG...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CCCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGAGCCATGAGCAGCAGCTaGGTAGGCCCGGTCTTGCCC +
Preference number: 2 (lower is better)
Translates to: PPGPPASHGGCGLHMCLGAMSSS*VGPVLP
Trigger: GGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGC...TCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGACGCCATGAGCAGCAGCTaGGTAGGCCCGGTCTTGCCC +
Preference number: 2 (lower is better)
Translates to: PQDPRHPMEVVDSTCVLDAMSSS*VGPVLP
Trigger: GGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGC...GTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp GGGGAGTCCAGAAAGGGTAGCTTCAGCAGGAGCCCTCCAAGGCCCCCGCCCACAGCTGCAGGAAGACCATaGGGAAGCCAAAGCCCACGA +
Preference number: 2 (lower is better)
Translates to: GESRKGSFSRSPPRPPPTAAGRP*GSQSPR
Trigger: TCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAGC...TGTGGGCGGGGGCCTTGGAGGGCTCCTGCTGAAGCTACCCTTTCTGGACTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp TCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCTGGTGCATGGCCTGTaGCGTGGCACTGCGCTGGCC +
Preference number: 2 (lower is better)
Translates to: SGWASGEVPPIVPSYGPTLVHGL*RGTALA
Trigger: GGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAG...AGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp GGGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCAGCCCTGGCGGTGCTTaGTCTTCTCCAGCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: GQSGWASGEVPPIVPSYGSPGGA*SSPAGA
Trigger: GGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCT...GCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp GGGGAGTCCAGAAAGGGTAGCTTCAGCAGGAGCCCTCCAAGGCCCCCGCCCACAAGCCAAGAAGCCAGCTaGCAGAGCCCCAAAGGGTGT +
Preference number: 2 (lower is better)
Translates to: GESRKGSFSRSPPRPPPTSQEAS*QSPKGC
Trigger: ACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCT...TGTGGGCGGGGGCCTTGGAGGGCTCCTGCTGAAGCTACCCTTTCTGGACTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp TTGAGGGCCGTCCGATGCTGCCCAGCCCCCAGCGCTGTGAGTGCAGCATTGAAGAGCCCTGGACCAGTGTaGACCACTGCAGGGCAAAGG +
Preference number: 2 (lower is better)
Translates to: LRAVRCCPAPSAVSAALKSPGPV*TTAGQR
Trigger: CCTTTGCCCTGCAGTGGTCCACACTGGTCCAGGGCT...CTTCAATGCTGCACTCACAGCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCCGGCATCTCTCACCTaGGGAGGTGGGGTGAGAGGC +
Preference number: 2 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPPASLT*GGGVRG
Trigger: GCCTCTCACCCCACCTCCCCAGGTGAGAGATGCCGG...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000451864.6
ENST00000620376.4
3UTR-3UTR TCA 90 bp ATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCCGGCACCAAAGGAGATaGGCACGGCCCCCGCACAAA +
Preference number: 2 (lower is better)
Translates to: MACDVALRWPSAMSGNTLRHQRR*ARPPHK
Trigger: TTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCCG...GAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTTTCACTGTAACTGTGTaGCGTGGGGCCAGTGGATCA +
Preference number: 2 (lower is better)
Translates to: SPKSWCMACDVALRWPSAFTVTV*RGASGS
Trigger: TGATCCACTGGCCCCACGTCACACAGTTACAGTGAA...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp CCCAGCCCCCAGCGCTGTGAGTGCAGCATTGAAGCTAGGCCAGAAGATCCACAGACCAGTGTGGACCACTaGAGGGCAAAGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: PSPQRCECSIEARPEDPQTSVDH*RAKAAR
Trigger: CCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGT...CTGTGGATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGCGCTGGGGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp ATCACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCAGCCCTGGCGGTGCTTaGTCTTCTCCAGCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: ITLNQAWLGLHCNCVTWGSPGGA*SSPAGA
Trigger: GGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCT...GCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp ACAAACAGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCCTGACAAGGCAAAGGTaGCAAGGGTGCTGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: TNSPKSWCMACDVALRWPLTRQR*QGCWQP
Trigger: TGGCTGCCAGCACCCTTGGCACCTTTGCCTTGTCAG...GGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp GTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCTCCCTGTGGAGACGCTaGCTGTGGAAAGGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: VGHLVRFPLLYPVTAPLPSLWRR*LWKGAS
Trigger: GGAGGCCCCTTTCCACAGGCAGCGTCTCCACAGGGA...GGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTCCACCCTCAGACGCCAACATGGATGTaGCCACCGTGGAAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: LSGAGSGLGLSVCLLHPQTPTWM*PPWKEW
Trigger: CCACTCCTTCCACGGTGGCCACATCCATGTTGGCGT...CTGAGGGTGGAGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCGACGTGGCACTGCGCTaGCCCTCGGCTATGAGTGGA +
Preference number: 2 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPDVALR*PSAMSG
Trigger: TCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTC...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp AAAGGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTGACGTGGCACTGCGCTaGCCCTCGGCTATGAGTGGA +
Preference number: 2 (lower is better)
Translates to: KGACPLRGWQWVRPECLPDVALR*PSAMSG
Trigger: TCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTC...AGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCCCCAAAGGGACCCTCAACCAGGCCTaGCTTGGGCTTCACTGTAAC +
Preference number: 2 (lower is better)
Translates to: PQRGDSPSQEASCQSPKGTLNQA*LGLHCN
Trigger: GTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGT...CCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp GGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCCATGGCGAAGAGGTCTaGATGGTAGACGGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: GTALALGYEWKHTLQAISHGEEV*MVDGAL
Trigger: CAGGGCTCCGTCTACCATTCAGACCTCTTCGCCATG...GGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp ATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGAGTCTGGGGGAGTAGTATGTGTTaGGGGCCGTCCGATGCTGCC +
Preference number: 2 (lower is better)
Translates to: MLARHLPVNLVLVVLGVWGSSMC*GPSDAA
Trigger: GGCAGCATCGGACGGCCCTCAACACATACTACTCCC...CCAGACTCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp CCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGACCAAAGGTGCCAAGGGTaGTGGCAGCCAGGGAGTAGT +
Preference number: 2 (lower is better)
Translates to: PQDPRHPMEVVDSTCVLDQRCQG*WQPGSS
Trigger: ACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTG...GTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GGACCATGTCAAGCCTCCCATCTTCCCCTACAAGGGCTGACAAGGCAAAGGTGCGCCATGAGCAGCAGCTaGGTAGGCCCGGTCTTGCCC +
Preference number: 2 (lower is better)
Translates to: GPCQASHLPLQGLTRQRCAMSSS*VGPVLP
Trigger: GGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGC...GCACCTTTGCCTTGTCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCTTGCTCTTCTCCAGCTaGGGCCTGTACAGAACCCGC +
Preference number: 2 (lower is better)
Translates to: GTALALGYEWKHTLQAISLLFSS*GLYRTR
Trigger: GCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA...GGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTGGCCAGTGGATCACTTaGGTGCCTCAATTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: GACPLRGWQWVRPECLPPGQWIT*VPQFGL
Trigger: GAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCC...AGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp GATGAGCACGGCCCCCGCACAAAAGTCAGCATTGATCATGCTCTCCACGCCAACACCAGTGTGGACCACTaGAGGGCAAAGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: DEHGPRTKVSIDHALHANTSVDH*RAKAAR
Trigger: CCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGT...GTTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTGCGGGGGCCGTGCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp GAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCCCCCAGCGCTGTGAGTaGAGCATTGAAGCTAGGCCA +
Preference number: 2 (lower is better)
Translates to: ELVPQRGDSPSQEASCQSPQRCE*SIEARP
Trigger: TGGCCTAGCTTCAATGCTGCACTCACAGCGCTGGGG...GCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp ATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGAGTCTGGAGCCAAGAAGCCAGCTaGCAGAGCCCCAAAGGGTGT +
Preference number: 2 (lower is better)
Translates to: MLARHLPVNLVLVVLGVWSQEAS*QSPKGC
Trigger: ACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCT...CCAGACTCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCCACCGTGGAAGGAGTaGAGAAAGCCCTGGACCAGT +
Preference number: 2 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPPPWKE*RKPWTS
Trigger: ACTGGTCCAGGGCTTTCTCCACTCCTTCCACGGTGG...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp ATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCCCACCGTGGAAGGAGTaGAGAAAGCCCTGGACCAGT +
Preference number: 2 (lower is better)
Translates to: MACDVALRWPSAMSGNTLPPWKE*RKPWTS
Trigger: ACTGGTCCAGGGCTTTCTCCACTCCTTCCACGGTGG...GAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GCCCCCGCCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGTGGATGTGGCCACCGTaGAAGGAGTGGAGAAAGCCC +
Preference number: 2 (lower is better)
Translates to: APAHRGKHQCDKQPEELVWMWPP*KEWRKP
Trigger: GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCA...CACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GCCCCCGCCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGTTGCTCTTCTCCAGCTaGGGCCTGTACAGAACCCGC +
Preference number: 2 (lower is better)
Translates to: APAHRGKHQCDKQPEELVLLFSS*GLYRTR
Trigger: GCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA...CACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTCGTAAGCTTCATGGGTaGCAAGTCCAGCCACAAGGA +
Preference number: 2 (lower is better)
Translates to: GACPLRGWQWVRPECLPPRKLHG*QVQPQG
Trigger: TCCTTGTGGCTGGACTTGCCACCCATGAAGCTTACG...AGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp TCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCGAAGAGCTGGTGCATaGCCTGTGACGTGGCACTGC +
Preference number: 2 (lower is better)
Translates to: SGWASGEVPPIVPSYGPTRRAGA*PVTWHC
Trigger: GCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCG...AGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTACCCTCAGAGGTCTCTaGGCTTTATCCTCATGCTCG +
Preference number: 2 (lower is better)
Translates to: GACPLRGWQWVRPECLPPTLRGL*ALSSCS
Trigger: CGAGCATGAGGATAAAGCCCAGAGACCTCTGAGGGT...AGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp CAGGGGTCTAGGAGGCATAAGACCAATATGATGCCTCCAAGGCCCCCGCCCACAGCTGCAGGAAGACCATaGGGAAGCCAAAGCCCACGA +
Preference number: 2 (lower is better)
Translates to: QGSRRHKTNMMPPRPPPTAAGRP*GSQSPR
Trigger: TCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAGC...TGTGGGCGGGGGCCTTGGAGGCATCATATTGGTCTTATGCCTCCTAGACCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451864.6
3UTR-3UTR TCA 90 bp ACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCCCCTCACCCCCAGGAGATaGAGGAGCACAAACTCATTG +
Preference number: 2 (lower is better)
Translates to: TCTPAWRQSQPRSQLPEPLTPRR*RSTNSL
Trigger: CAATGAGTTTGTGCTCCTTCATCTCCTGGGGGTGAG...GGGCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp CCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGACCTCACCCCCAGGAGATaGAGGAGCACAAACTCATTG +
Preference number: 2 (lower is better)
Translates to: PQDPRHPMEVVDSTCVLDLTPRR*RSTNSL
Trigger: CAATGAGTTTGTGCTCCTTCATCTCCTGGGGGTGAG...GTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp GTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCTTCCCCTACAAGGGCTaGCAAGGCAAAGGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: VGHLVRFPLLYPVTAPLPFPYKG*QGKGAK
Trigger: CTTGGCACCTTTGCCTTGTCAGCCCTTGTAGGGGAA...GGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp ATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGAGTCTGGTTCCCCTACAAGGGCTaGCAAGGCAAAGGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: MLARHLPVNLVLVVLGVWFPYKG*QGKGAK
Trigger: CTTGGCACCTTTGCCTTGTCAGCCCTTGTAGGGGAA...CCAGACTCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp GCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGCCCCAGCGCTGTGAGTaGAGCATTGAAGCTAGGCCA +
Preference number: 2 (lower is better)
Translates to: AWLGLHCNCVTWGQWITWPQRCE*SIEARP
Trigger: TGGCCTAGCTTCAATGCTGCACTCACAGCGCTGGGG...CCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp CCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCAGCCCGAAGAGCTGGTaGATGGCCTGTGACGTGGCA +
Preference number: 2 (lower is better)
Translates to: PTEANISVTNSPKSWCMASPKSW*MACDVA
Trigger: TGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT...GGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CCCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGAATGGCATGCACGTCCTaGAAGCCTGTAATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: PPGPPASHGGCGLHMCLGMACTS*KPVIPA
Trigger: AGCTGGGATTACAGGCTTCCAGGACGTGCATGCCAT...TCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CCACCACAACCCCTCCAGCCAGCGCTGCATTTTGGATGTGGACCATGTCAAGCCACGCCAACATGGATGTaGCCACCGTGGAAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: PPQPLQPALHFGCGPCQATPTWM*PPWKEW
Trigger: CCACTCCTTCCACGGTGGCCACATCCATGTTGGCGT...GGCTTGACATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGGGTTGTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp ATCCTCATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGACTCTCCACGCCAACATaGATGTGGCCACCGTGGAAG +
Preference number: 2 (lower is better)
Translates to: ILMLARHLPVNLVLVVLGLSTPT*MWPPWK
Trigger: CTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAG...TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCATGAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CAGGGGTCTAGGAGGCATAAGACCAATATGATGCCTCCAAGGCCCCCGCCCACAAGGTGCCAAGGGTGCTaGCAGCCAGGGAGTAGTATG +
Preference number: 2 (lower is better)
Translates to: QGSRRHKTNMMPPRPPPTRCQGC*QPGSSM
Trigger: CATACTACTCCCTGGCTGCCAGCACCCTTGGCACCT...TGTGGGCGGGGGCCTTGGAGGCATCATATTGGTCTTATGCCTCCTAGACCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451864.6
3UTR-3UTR CCA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCAAAGGGGCCTCCTTCTaGCTCATGGCTCCCTTCTTG +
Preference number: 2 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPKGASF*LMAPFL
Trigger: CAAGAAGGGAGCCATGAGCCAGAAGGAGGCCCCTTT...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp AAGGGTGCTGGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCTGTAACTGTGTGACGTaGGGCCAGTGGATCACTTGG +
Preference number: 2 (lower is better)
Translates to: KGAGSQGVVCVEGRPMLPCNCVT*GQWITW
Trigger: CCAAGTGATCCACTGGCCCCACGTCACACAGTTACA...GGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp GGTGCTGGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCAGCCACAAAAGTCAGCATTaGTCATGCTCTCCACGCCAA +
Preference number: 2 (lower is better)
Translates to: GAGSQGVVCVEGRPMLPSHKSQH*SCSPRQ
Trigger: TTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTG...GCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp GTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCTTCACTGTAACTGTGTaGCGTGGGGCCAGTGGATCA +
Preference number: 2 (lower is better)
Translates to: VGHLVRFPLLYPVTAPLPFTVTV*RGASGS
Trigger: TGATCCACTGGCCCCACGTCACACAGTTACAGTGAA...GGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp ATCCTCATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGACAGCATCATTTCACTTaGGGTCCCCACCACAACCCC +
Preference number: 2 (lower is better)
Translates to: ILMLARHLPVNLVLVVLGQHHFT*GPHHNP
Trigger: GGGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTG...TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCATGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp TTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGATGGCATGCACGTCCTaGAAGCCTGTAATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: LLFSSWGLYRTRERTSPKMACTS*KPVIPA
Trigger: AGCTGGGATTACAGGCTTCCAGGACGTGCATGCCAT...CTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp TGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACAGCCCTGGACCAGTGTaGACCACTGCAGGGCAAAGG +
Preference number: 2 (lower is better)
Translates to: CVTWGQWITWVPQFGLFYSPGPV*TTAGQR
Trigger: CCTTTGCCCTGCAGTGGTCCACACTGGTCCAGGGCT...GTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCGTAAGCTTCCCACCGTGGAAGGAGTaGAGAAAGCCCTGGACCAGT +
Preference number: 2 (lower is better)
Translates to: LALGYEWKHTLQAISVSFPPWKE*RKPWTS
Trigger: ACTGGTCCAGGGCTTTCTCCACTCCTTCCACGGTGG...GAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTAGATGGTCCCAATCATaGCGAAGAGGTCTGAATGGT +
Preference number: 2 (lower is better)
Translates to: GACPLRGWQWVRPECLPPRWSQS*RRGLNG
Trigger: ACCATTCAGACCTCTTCGCCATGATTGGGACCATCT...AGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCGTAAGCTTCAGGTGCCAAGGGTGCTaGCAGCCAGGGAGTAGTATG +
Preference number: 2 (lower is better)
Translates to: LALGYEWKHTLQAISVSFRCQGC*QPGSSM
Trigger: CATACTACTCCCTGGCTGCCAGCACCCTTGGCACCT...GAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp TCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTAAAGGGGCCTCCTTCTaGCTCATGGCTCCCTTCTTG +
Preference number: 2 (lower is better)
Translates to: SGWASGEVPPIVPSYGPTKGASF*LMAPFL
Trigger: CAAGAAGGGAGCCATGAGCCAGAAGGAGGCCCCTTT...AGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGGGCCAGTGGATCACTTaGGTGCCTCAATTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: AWLGLHCNCVTWGQWITWGQWIT*VPQFGL
Trigger: GAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCC...CCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGTGACGTGGGGCCAGTaGATCACTTGGGTGCCTCAA +
Preference number: 2 (lower is better)
Translates to: GASGSLGCLNLASSTHVQVTWGQ*ITWVPQ
Trigger: TTGAGGCACCCAAGTGATCCACTGGCCCCACGTCAC...CTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCGTAAGCTTCGTGACGTGGGGCCAGTaGATCACTTGGGTGCCTCAA +
Preference number: 2 (lower is better)
Translates to: LALGYEWKHTLQAISVSFVTWGQ*ITWVPQ
Trigger: TTGAGGCACCCAAGTGATCCACTGGCCCCACGTCAC...GAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp GCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGCTGCTGCAGGAAGACCATaGGGAAGCCAAAGCCCACGA +
Preference number: 2 (lower is better)
Translates to: ASGSLGCLNLASSTHVQAAAGRP*GSQSPR
Trigger: TCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAGC...AGCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp GGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGTCATGGCTCCCTTCTTaGAGCTGGAGGAATGGGAGC +
Preference number: 2 (lower is better)
Translates to: GASGSLGCLNLASSTHVQSWLPS*SWRNGS
Trigger: GCTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGA...CTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGATGGCATGCACGTCCTaGAAGCCTGTAATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: AWLGLHCNCVTWGQWITWMACTS*KPVIPA
Trigger: AGCTGGGATTACAGGCTTCCAGGACGTGCATGCCAT...CCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GAAACACACTCTCCAGGCCATCTCCGTAAGCTTCATGGGTGGCAAGTCCAGCCACTCTCCACGCCAACATaGATGTGGCCACCGTGGAAG +
Preference number: 2 (lower is better)
Translates to: ETHSPGHLRKLHGWQVQPLSTPT*MWPPWK
Trigger: CTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAG...TGGCTGGACTTGCCACCCATGAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGCTTTGCTCTTCTCCAGCTaGGGCCTGTACAGAACCCGC +
Preference number: 2 (lower is better)
Translates to: ASGSLGCLNLASSTHVQALLFSS*GLYRTR
Trigger: GCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA...AGCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CCCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGAAGATGGTCCCAATCATaGCGAAGAGGTCTGAATGGT +
Preference number: 2 (lower is better)
Translates to: PPGPPASHGGCGLHMCLGRWSQS*RRGLNG
Trigger: ACCATTCAGACCTCTTCGCCATGATTGGGACCATCT...TCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGACAGATCCACAGGAAGATaGTCCCAATCATGGCGAAGA +
Preference number: 2 (lower is better)
Translates to: PQDPRHPMEVVDSTCVLDRSTGR*SQSWRR
Trigger: TCTTCGCCATGATTGGGACCATCTTCCTGTGGATCT...GTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGCGTAAGCTTCATGGGTaGCAAGTCCAGCCACAAGGA +
Preference number: 2 (lower is better)
Translates to: AWLGLHCNCVTWGQWITWRKLHG*QVQPQG
Trigger: TCCTTGTGGCTGGACTTGCCACCCATGAAGCTTACG...CCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCTGGTGACGTGGGGCCAGTaGATCACTTGGGTGCCTCAA +
Preference number: 2 (lower is better)
Translates to: HRGKHQCDKQPEELVHGLVTWGQ*ITWVPQ
Trigger: TTGAGGCACCCAAGTGATCCACTGGCCCCACGTCAC...CAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp AAGAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAACTTGTACCCCAGCGTaGAGACAGTCCCAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: KNLYPSVETVPAKKPAARTCTPA*RQSQPR
Trigger: TCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGT...TCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCGTAAGCTTCACTTGTACCCCAGCGTaGAGACAGTCCCAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: LALGYEWKHTLQAISVSFTCTPA*RQSQPR
Trigger: TCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGT...GAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp ATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGAGTCTGGCACAAAAGTCAGCATTaGTCATGCTCTCCACGCCAA +
Preference number: 2 (lower is better)
Translates to: MLARHLPVNLVLVVLGVWHKSQH*SCSPRQ
Trigger: TTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTG...CCAGACTCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCGGCACCAAAGGAGATaGGCACGGCCCCCGCACAAA +
Preference number: 2 (lower is better)
Translates to: QLEEWELKKNFLVAASQHRHQRR*ARPPHK
Trigger: TTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCCG...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp ATCCTCATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGAGGAGCACAAACTCATTaGTGCCAAACAGCACCACCT +
Preference number: 2 (lower is better)
Translates to: ILMLARHLPVNLVLVVLGGAQTH*CQTAPP
Trigger: AGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCC...TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCATGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp AAGAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGATGTAACTGTGTGACGTaGGGCCAGTGGATCACTTGG +
Preference number: 2 (lower is better)
Translates to: KNLYPSVETVPAKKPAARCNCVT*GQWITW
Trigger: CCAAGTGATCCACTGGCCCCACGTCACACAGTTACA...TCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CGCTGCATTTTGGATGTGGACCATGTCAAGCCTCCCATCTTCCCCTACAAGGGCACCCTCAACCAGGCCTaGCTTGGGCTTCACTGTAAC +
Preference number: 2 (lower is better)
Translates to: RCILDVDHVKPPIFPYKGTLNQA*LGLHCN
Trigger: GTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGT...GCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp AAGAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCCAGCGCTGCATTTTaGATGTGGACCATGTCAAGC +
Preference number: 2 (lower is better)
Translates to: KNLYPSVETVPAKKPAARASAAF*MWTMSS
Trigger: GCTTGACATGGTCCACATCCAAAATGCAGCGCTGGC...TCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp GAAACACACTCTCCAGGCCATCTCCGTAAGCTTCATGGGTGGCAAGTCCAGCCATTCACTGTAACTGTGTaGCGTGGGGCCAGTGGATCA +
Preference number: 2 (lower is better)
Translates to: ETHSPGHLRKLHGWQVQPFTVTV*RGASGS
Trigger: TGATCCACTGGCCCCACGTCACACAGTTACAGTGAA...TGGCTGGACTTGCCACCCATGAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATAGCCCGAAGAGCTGGTaGATGGCCTGTGACGTGGCA +
Preference number: 2 (lower is better)
Translates to: QLEEWELKKNFLVAASQHSPKSW*MACDVA
Trigger: TGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAATCTCACCTGGGGAGGTaGGGTGAGAGGCAGCACCCC +
Preference number: 2 (lower is better)
Translates to: GMGAQKELPSSSQSASSKSHLGR*GERQHP
Trigger: GGGGTGCTGCCTCTCACCCCACCTCCCCAGGTGAGA...TTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451864.6
ENST00000620376.4
3UTR-3UTR TCA 90 bp CTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTGGGAGTAGTATGTGTTaGGGGCCGTCCGATGCTGCC +
Preference number: 2 (lower is better)
Translates to: LEEWELKKNFLVAASQHLGSSMC*GPSDAA
Trigger: GGCAGCATCGGACGGCCCTCAACACATACTACTCCC...AAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp GGGGAGTCCAGAAAGGGTAGCTTCAGCAGGAGCCCTCCAAGGCCCCCGCCCACAACTCCACATGTGTCTTaGACTTTGAATTTTGATTCA +
Preference number: 2 (lower is better)
Translates to: GESRKGSFSRSPPRPPPTTPHVS*TLNFDS
Trigger: TGAATCAAAATTCAAAGTCCAAGACACATGTGGAGT...TGTGGGCGGGGGCCTTGGAGGGCTCCTGCTGAAGCTACCCTTTCTGGACTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR GCA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCCCTCCAGCCAGCGCTaGATTTTGGATGTGGACCAT +
Preference number: 2 (lower is better)
Translates to: QLEEWELKKNFLVAASQHPSSQR*ILDVDH
Trigger: ATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGG...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTTGGATGTGGCCACCGTaGAAGGAGTGGAGAAAGCCC +
Preference number: 2 (lower is better)
Translates to: LEEWELKKNFLVAASQHLWMWPP*KEWRKP
Trigger: GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCA...AAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTTTGCTCTTCTCCAGCTaGGGCCTGTACAGAACCCGC +
Preference number: 2 (lower is better)
Translates to: LEEWELKKNFLVAASQHLLLFSS*GLYRTR
Trigger: GCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA...AAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CGCTGCATTTTGGATGTGGACCATGTCAAGCCTCCCATCTTCCCCTACAAGGGCAGATCCACAGGAAGATaGTCCCAATCATGGCGAAGA +
Preference number: 2 (lower is better)
Translates to: RCILDVDHVKPPIFPYKGRSTGR*SQSWRR
Trigger: TCTTCGCCATGATTGGGACCATCTTCCTGTGGATCT...GCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp ACAAACAGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCACTCCACATGTGTCTTaGACTTTGAATTTTGATTCA +
Preference number: 2 (lower is better)
Translates to: TNSPKSWCMACDVALRWPTPHVS*TLNFDS
Trigger: TGAATCAAAATTCAAAGTCCAAGACACATGTGGAGT...GGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATGGCCAGTGGATCACTTaGGTGCCTCAATTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: QLEEWELKKNFLVAASQHGQWIT*VPQFGL
Trigger: GAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCC...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CCA 90 bp CTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTGTGACGTGGGGCCAGTaGATCACTTGGGTGCCTCAA +
Preference number: 2 (lower is better)
Translates to: LEEWELKKNFLVAASQHLVTWGQ*ITWVPQ
Trigger: TTGAGGCACCCAAGTGATCCACTGGCCCCACGTCAC...AAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CAA 90 bp CCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGACTTaGAATTTTGATTCAAGGATGGGCATGTCAAGCCTCCCATCTTCC +
Preference number: 2 (lower is better)
Translates to: PGIPWRLWTPHVSWT*NFDSRMGMSSLPSS
Trigger: GGAAGATGGGAGGCTTGACATGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451864.6
3UTR CAA 90 bp CCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGACTTaGAATTTTGATTCAAGGATGGGCGTGAAGAACTTGTACCCCAGC +
Preference number: 2 (lower is better)
Translates to: PGIPWRLWTPHVSWT*NFDSRMGVKNLYPS
Trigger: GCTGGGGTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTCACCCCCAGGAGATaGAGGAGCACAAACTCATTG +
Preference number: 2 (lower is better)
Translates to: QLEEWELKKNFLVAASQHLTPRR*RSTNSL
Trigger: CAATGAGTTTGTGCTCCTTCATCTCCTGGGGGTGAG...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR TCA 90 bp AAGAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGATTGGACTTTGAATTTTaGTTCAAGGATGGGCGTGAA +
Preference number: 2 (lower is better)
Translates to: KNLYPSVETVPAKKPAARLDFEF*FKDGRE
Trigger: TTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAA...TCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR TCA 72 bp TGCCAAGGGTGCTGGCAGCCAGGGAGTAGTATGTGTTaGGGGCCGTCCGATGCTGCCCAGCCCCCAGCGCTG +
Preference number: 3 (lower is better)
Translates to: CQGCWQPGSSMC*GPSDAAQPPAL
Trigger: CAGCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACCCTTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR TCA 72 bp TGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCTGTaGCGTGGCACTGCGCTGGCCCTCGGCTATGAGTGG +
Preference number: 3 (lower is better)
Translates to: CDKQPEELVHGL*RGTALALGYEW
Trigger: CCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR TCA 72 bp GTGCAGGCTGGTAGGGCAGTCGGGTTGGGCATCTGGTaGGGTTCCCCCTATTGTACCCAGTTACGGCCCCAC +
Preference number: 3 (lower is better)
Translates to: VQAGRAVGLGIW*GSPYCTQLRPH
Trigger: GTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCCTACCAGCCTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR GCA 72 bp AGAGGTCTGAATGGTAGACGGAGCCCTGGCGGTGCTTaGTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCG +
Preference number: 3 (lower is better)
Translates to: RGLNGRRSPGGA*SSPAGACTEPA
Trigger: CGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCTCCGTCTACCATTCAGACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 72 bp ACACACTCTCCAGGCCATCTCCGTAAGCTTCATGGGTaGCAAGTCCAGCCACAAGGACCCCCAGGAGGGCCC +
Preference number: 3 (lower is better)
Translates to: THSPGHLRKLHG*QVQPQGPPGGP
Trigger: GGGCCCTCCTGGGGGTCCTTGTGGCTGGACTTGCCACCCATGAAGCTTACGGAGATGGCCTGGAGAGTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp CCCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGAGGGCCAGTGGATCACTaGGGTGCCTCAATTTGGCCT +
Preference number: 3 (lower is better)
Translates to: PPGPPASHGGCGLHMCLGGPVDH*GASIWP
Trigger: AGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCC...TCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR GCA 72 bp GCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTaGATGGCCTGTGACGTGGCACTGCGCTGGCCCTCG +
Preference number: 3 (lower is better)
Translates to: ANISVTNSPKSW*MACDVALRWPS
Trigger: CGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 72 bp AAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTaGCCCTCGGCTATGAGTGGAAACACACTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: KSWCMACDVALR*PSAMSGNTLSR
Trigger: CCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 72 bp GAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTaGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCC +
Preference number: 3 (lower is better)
Translates to: EANISVTNSPKS*CMACDVALRWP
Trigger: GGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp GGGGAGTCCAGAAAGGGTAGCTTCAGCAGGAGCCCTCCAAGGCCCCCGCCCACAAGGAGCACAAACTCATaGATGCCAAACAGCACCACC +
Preference number: 3 (lower is better)
Translates to: GESRKGSFSRSPPRPPPTRSTNS*MPNSTT
Trigger: GGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCT...TGTGGGCGGGGGCCTTGGAGGGCTCCTGCTGAAGCTACCCTTTCTGGACTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp ATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGAGTCTGGGGGCCAGTGGATCACTaGGGTGCCTCAATTTGGCCT +
Preference number: 3 (lower is better)
Translates to: MLARHLPVNLVLVVLGVWGPVDH*GASIWP
Trigger: AGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCC...CCAGACTCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR TCA 72 bp GACCATGTCAAGCCTCCCATCTTCCCCTACAAGGGCTaGCAAGGCAAAGGTGCCAAGGGTGCTGGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: DHVKPPIFPYKG*QGKGAKGAGSQ
Trigger: CTGGCTGCCAGCACCCTTGGCACCTTTGCCTTGTCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR GCA 72 bp CCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTaGCAGAGCCCCAAAGGGTGTCAGCATCATTTCACT +
Preference number: 3 (lower is better)
Translates to: PQRGDSPSQEAS*QSPKGCQHHFT
Trigger: AGTGAAATGATGCTGACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 72 bp GACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTaGCCTCTTCTACCCATGTGCAGGCTGGTAGGGCAG +
Preference number: 3 (lower is better)
Translates to: DVGPVDHLGASI*PLLPMCRLVGQ
Trigger: CTGCCCTACCAGCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp CTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTCCACCCTCAGAGGAGCACAAACTCATaGATGCCAAACAGCACCACC +
Preference number: 3 (lower is better)
Translates to: LSGAGSGLGLSVCLLHPQRSTNS*MPNSTT
Trigger: GGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCT...CTGAGGGTGGAGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCTCAACCAGGCCTGGCTaGGGCTTCACTGTAACTGTG +
Preference number: 3 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPSTRPG*GFTVTV
Trigger: CACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGA...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp CACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCTTTCCCAGCCTCCTGTaGCCCCTCTCCCTGTGGAGA +
Preference number: 3 (lower is better)
Translates to: HCNCVTWGQWITWVPQFGFPSLL*PLSLWR
Trigger: TCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAAA...GCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp GGGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCTCAGCATCATTTCACTaGAGGTCCCCACCACAACCC +
Preference number: 3 (lower is better)
Translates to: GQSGWASGEVPPIVPSYGSASFH*RSPPQP
Trigger: GGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTGA...GCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp ATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGAGTCTGGTCAGCATCATTTCACTaGAGGTCCCCACCACAACCC +
Preference number: 3 (lower is better)
Translates to: MLARHLPVNLVLVVLGVWSASFH*RSPPQP
Trigger: GGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTGA...CCAGACTCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp ATCCTCATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGAATGGGCGTGAAGAACTaGTACCCCAGCGTGGAGACA +
Preference number: 3 (lower is better)
Translates to: ILMLARHLPVNLVLVVLGMGVKN*YPSVET
Trigger: TGTCTCCACGCTGGGGTACAAGTTCTTCACGCCCAT...TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCATGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR GCA 72 bp CACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTaGAGGCTGGTAGGGCAGTCGGGTTGGGCATCTGGT +
Preference number: 3 (lower is better)
Translates to: HLGASIWPLLPM*RLVGQSGWASG
Trigger: ACCAGATGCCCAACCCGACTGCCCTACCAGCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 72 bp CAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTaGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGC +
Preference number: 3 (lower is better)
Translates to: QAWLGLHCNCVT*GQWITWVPQFG
Trigger: GCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp AAGAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGGCATCCCATGGAGGTaGTGGACTCCACATGTGTCT +
Preference number: 3 (lower is better)
Translates to: KNLYPSVETVPAKKPAARGIPWR*WTPHVS
Trigger: AGACACATGTGGAGTCCACAACCTCCATGGGATGCC...TCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR TCA 72 bp TCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTaGCGTGGGGCCAGTGGATCACTTGGGTGCCTCAAT +
Preference number: 3 (lower is better)
Translates to: STRPGLGFTVTV*RGASGSLGCLN
Trigger: ATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp CTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCGTAAGCTTCGCTGTGAGTGCAGCATaGAAGCTAGGCCAGAAGATC +
Preference number: 3 (lower is better)
Translates to: LALGYEWKHTLQAISVSFAVSAA*KLGQKI
Trigger: GATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGC...GAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp CACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCTCAACCAGGCCTGGCTaGGGCTTCACTGTAACTGTG +
Preference number: 3 (lower is better)
Translates to: HCNCVTWGQWITWVPQFGSTRPG*GFTVTV
Trigger: CACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGA...GCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp GAAACACACTCTCCAGGCCATCTCCGTAAGCTTCATGGGTGGCAAGTCCAGCCATCAACCAGGCCTGGCTaGGGCTTCACTGTAACTGTG +
Preference number: 3 (lower is better)
Translates to: ETHSPGHLRKLHGWQVQPSTRPG*GFTVTV
Trigger: CACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGA...TGGCTGGACTTGCCACCCATGAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp CTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCGTAAGCTTCAGCCAGCGCTGCATTTaGGATGTGGACCATGTCAAG +
Preference number: 3 (lower is better)
Translates to: LALGYEWKHTLQAISVSFSQRCI*DVDHVK
Trigger: CTTGACATGGTCCACATCCAAAATGCAGCGCTGGCT...GAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp AAGAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAAGCCAGCGCTGCATTTaGGATGTGGACCATGTCAAG +
Preference number: 3 (lower is better)
Translates to: KNLYPSVETVPAKKPAARSQRCI*DVDHVK
Trigger: CTTGACATGGTCCACATCCAAAATGCAGCGCTGGCT...TCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR GCA 72 bp GGAAAGGGGCCTCCTTCTGGCTCATGGCTCCCTTCTTaGAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCC +
Preference number: 3 (lower is better)
Translates to: GKGPPSGSWLPS*SWRNGSSKRTS
Trigger: GGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGAGCCAGAAGGAGGCCCCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp CACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCTGGCTGTGAGTGCAGCATaGAAGCTAGGCCAGAAGATC +
Preference number: 3 (lower is better)
Translates to: HRGKHQCDKQPEELVHGLAVSAA*KLGQKI
Trigger: GATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGC...CAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 72 bp CAAAAGTCAGCATTGATCATGCTCTCCACGCCAACATaGATGTGGCCACCGTGGAAGGAGTGGAGAAAGCCC +
Preference number: 3 (lower is better)
Translates to: QKSALIMLSTPT*MWPPWKEWRKP
Trigger: GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAGCATGATCAATGCTGACTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR CCA 72 bp CACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTaGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCA +
Preference number: 3 (lower is better)
Translates to: HCNCVTWGQWIT*VPQFGLFYPCA
Trigger: TGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CCA 72 bp CTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTaGATCACTTGGGTGCCTCAATTTGGCCTCTTCTAC +
Preference number: 3 (lower is better)
Translates to: LGLHCNCVTWGQ*ITWVPQFGLFY
Trigger: GTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp ACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCCCCATGTGTCTTGGACTTaGAATTTTGATTCAAGGATG +
Preference number: 3 (lower is better)
Translates to: TCTPAWRQSQPRSQLPEPHVSWT*NFDSRM
Trigger: CATCCTTGAATCAAAATTCAAAGTCCAAGACACATG...GGGCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR-3UTR CAA 90 bp CTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTGCACAAAAGTCAGCATaGATCATGCTCTCCACGCCA +
Preference number: 3 (lower is better)
Translates to: LEEWELKKNFLVAASQHLAQKSA*IMLSTP
Trigger: TGGCGTGGAGAGCATGATCAATGCTGACTTTTGTGC...AAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
3UTR CCA 72 bp GGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTaGACTTTGAATTTTGATTCAAGGATGGGCGTGAAG +
Preference number: 3 (lower is better)
Translates to: GIPWRLWTPHVS*TLNFDSRMGVK
Trigger: CTTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR TCA 72 bp CATGGAGGTTGTGGACTCCACATGTGTCTTGGACTTTaGATTTTGATTCAAGGATGGGCATGTCAAGCCTCC +
Preference number: 3 (lower is better)
Translates to: HGGCGLHMCLGL*ILIQGWACQAS
Trigger: GGAGGCTTGACATGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCACAACCTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451864.6
3UTR CCA 72 bp GGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTaGACTTTGAATTTTGATTCAAGGATGGGCATGTCA +
Preference number: 3 (lower is better)
Translates to: GIPWRLWTPHVS*TLNFDSRMGMS
Trigger: TGACATGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451864.6
CDS-3UTR TCA 90 bp CAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGAGCACGGCCTGGTGCATGGCCTGTaGCGTGGCACTGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QLGRPGLAQDGTKGDEHGLVHGL*RGTALA
Trigger: GGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAG...GCCGTGCTCATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTAGCCCTGGCGGTGCTTaGTCTTCTCCAGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SPKSWCMACDVALRWPSASPGGA*SSPAGA
Trigger: GGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCT...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCCCCAAAGGGGACCCGGCCATGGGTTaGGCTGCGATCTCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PQRGDSPSQEASCQSPKGDPAMG*AAISAG
Trigger: GCCAGCCGAGATCGCAGCCCAACCCATGGCCGGGTC...CCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612897.4
ENST00000613460.4
CDS-3UTR CCA 90 bp CAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGAGCACGGCCCGGCATCTCTCACCTaGGGAGGTGGGGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QLGRPGLAQDGTKGDEHGPASLT*GGGVRG
Trigger: GCCTCTCACCCCACCTCCCCAGGTGAGAGATGCCGG...GCCGTGCTCATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451864.6
ENST00000620376.4
CDS-3UTR TCA 90 bp GTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCCTGGTGCATGGCCTGTaGCGTGGCACTGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VLALLQLGPVQNPRKDEPLVHGL*RGTALA
Trigger: GGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAG...GGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TTGAGGGCCGTCCGATGCTGCCCAGCCCCCAGCGCTGTGAGTGCAGCATTGAAGAGCCCTGGCGGTGCTTaGTCTTCTCCAGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LRAVRCCPAPSAVSAALKSPGGA*SSPAGA
Trigger: GGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCT...CTTCAATGCTGCACTCACAGCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTAGCCCGAAGAGCTGGTaGATGGCCTGTGACGTGGCA +
Preference number: 4 (lower is better)
Translates to: SPKSWCMACDVALRWPSASPKSW*MACDVA
Trigger: TGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTTTCCCAGCCTCCTGTTaGCCCTCTCCCTGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SPKSWCMACDVALRWPSAFPASC*PSPCGD
Trigger: GTCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAA...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCAGCCCCCAGCAAAGAGGACGGCAGTaGCGCCCTGGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GSQGVVCVEGRPMLPSPQQRGRQ*RPGGRG
Trigger: GCCTCTTCCTCCAGGGCGCCACTGCCGTCCTCTTTG...CTGGGGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCTGGTGCATGGCCTGTaGCGTGGCACTGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GSRVGHLVRFPLLYPVTALVHGL*RGTALA
Trigger: GGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAG...GGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCGGCCATGGGTTGGGCTaGGATCTCGGCTGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: VGHLVRFPLLYPVTAPLPGHGLG*DLGWRS
Trigger: CGAGCGCCAGCCGAGATCGCAGCCCAACCCATGGCC...GGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
CDS-3UTR GCA 90 bp GAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCGGCCATGGGTTGGGCTaGGATCTCGGCTGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: ELVPQRGDSPSQEASCQSGHGLG*DLGWRS
Trigger: CGAGCGCCAGCCGAGATCGCAGCCCAACCCATGGCC...GCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612897.4
ENST00000613460.4
CDS-3UTR GCA 90 bp TCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGGGCCATGGGTTGGGCTaGGATCTCGGCTGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: SSPAGACTEPAKGRARSRGHGLG*DLGWRS
Trigger: CGAGCGCCAGCCGAGATCGCAGCCCAACCCATGGCC...CCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
CDS-3UTR GCA 90 bp GGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTCCGCGTTACTGTGGTTaGTCCGGTGCCAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GACPLRGWQWVRPECLPPPRYCG*SGARGQ
Trigger: CTGCCCTCTGGCACCGGAGCAACCACAGTAACGCGG...AGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp AAGGGTGCTGGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCAGCCCTGGCGGTGCTTaGTCTTCTCCAGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KGAGSQGVVCVEGRPMLPSPGGA*SSPAGA
Trigger: GGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCT...GGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGCACCAAAGGTGTTTGAGGGCCGTCCGATaGTGCCCAGCCCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: GACTEPAKGRARSRHQRCLRAVR*CPAPSA
Trigger: AGCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAA...ACACCTTTGGTGCCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGGGAGTCCAGAAAGGGTAGCTTCAGCAGGAGCCCTCCAAGGCCCCCGCCCACATTCCCAGCCTCCTGTTaGCCCTCTCCCTGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GESRKGSFSRSPPRPPPTFPASC*PSPCGD
Trigger: GTCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAA...TGTGGGCGGGGGCCTTGGAGGGCTCCTGCTGAAGCTACCCTTTCTGGACTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGCACCAAAGGTGTGGACCCGGCCATGGGTTaGGCTGCGATCTCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GPVQNPRKDEPEVGTKGVDPAMG*AAISAG
Trigger: GCCAGCCGAGATCGCAGCCCAACCCATGGCCGGGTC...CACACCTTTGGTGCCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
CDS-3UTR CCA 90 bp CTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTCCACCCTCAGCAAAGAGGACGGCAGTaGCGCCCTGGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSGAGSGLGLSVCLLHPQQRGRQ*RPGGRG
Trigger: GCCTCTTCCTCCAGGGCGCCACTGCCGTCCTCTTTG...CTGAGGGTGGAGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CGGTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGGCATCTCTCACCTaGGGAGGTGGGGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RCLLFSSWGLYRTRERTSPASLT*GGGVRG
Trigger: GCCTCTCACCCCACCTCCCCAGGTGAGAGATGCCGG...GCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451864.6
ENST00000620376.4
CDS-3UTR CCA 90 bp TTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGGCATGGCCTGTGACGTaGCACTGCGCTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LLFSSWGLYRTRERTSPKAWPVT*HCAGPR
Trigger: CCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGC...CTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTAACAGCCCGAAGAGCTaGTGCATGGCCTGTGACGTG +
Preference number: 4 (lower is better)
Translates to: SPKSWCMACDVALRWPSANSPKS*CMACDV
Trigger: CACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTT...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGACCGGCACCAAAGGAGATaGGCACGGCCCCCGCACAAA +
Preference number: 4 (lower is better)
Translates to: PQDPRHPMEVVDSTCVLDRHQRR*ARPPHK
Trigger: TTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCCG...GTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTTTCCCCTACAAGGGCTaGCAAGGCAAAGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SPKSWCMACDVALRWPSAFPYKG*QGKGAK
Trigger: CTTGGCACCTTTGCCTTGTCAGCCCTTGTAGGGGAA...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CAGGGGTCTAGGAGGCATAAGACCAATATGATGCCTCCAAGGCCCCCGCCCACACTGGTGCATGGCCTGTaGCGTGGCACTGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QGSRRHKTNMMPPRPPPTLVHGL*RGTALA
Trigger: GGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAG...TGTGGGCGGGGGCCTTGGAGGCATCATATTGGTCTTATGCCTCCTAGACCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451864.6
CDS-3UTR TCA 90 bp GGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCAGCCCCCAGGGGTTGGGCATCTGGTaGGGTTCCCCCTATTGTACC +
Preference number: 4 (lower is better)
Translates to: GSQGVVCVEGRPMLPSPQGLGIW*GSPYCT
Trigger: GGTACAATAGGGGGAACCTCACCAGATGCCCAACCC...CTGGGGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp AGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCAGGCCATGGGTTGGGCTaGGATCTCGGCTGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: SRVGHLVRFPLLYPVTAPGHGLG*DLGWRS
Trigger: CGAGCGCCAGCCGAGATCGCAGCCCAACCCATGGCC...TGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
CDS-3UTR GCA 90 bp GGCACCAAAGGAGATGAGCACGGCCCCCGCACAAAAGTCAGCATTGATCATGCTCACAGCAGGGGAAGCTaGAGTCGCCGGCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: GTKGDEHGPRTKVSIDHAHSRGS*SRRPAA
Trigger: CGCCGCGGGCCGGCGACTGCAGCTTCCCCTGCTGTG...AGCATGATCAATGCTGACTTTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCACCAGTGTGGACCACTaGAGGGCAAAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VLALLQLGPVQNPRKDEPTSVDH*RAKAAR
Trigger: CCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGT...GGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTTCATGGCTCCCTTCTTaGAGCTGGAGGAATGGGAGC +
Preference number: 4 (lower is better)
Translates to: SPKSWCMACDVALRWPSASWLPS*SWRNGS
Trigger: GCTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGA...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCTCCCTGTGGAGACGCTaGCTGTGGAAAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VLALLQLGPVQNPRKDEPSLWRR*LWKGAS
Trigger: GGAGGCCCCTTTCCACAGGCAGCGTCTCCACAGGGA...GGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTCCCTCCAGCCAGCGCTaGATTTTGGATGTGGACCAT +
Preference number: 4 (lower is better)
Translates to: SPKSWCMACDVALRWPSAPSSQR*ILDVDH
Trigger: ATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGG...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGAGCACGGCTGGATGTGGCCACCGTaGAAGGAGTGGAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: QLGRPGLAQDGTKGDEHGWMWPP*KEWRKP
Trigger: GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCA...GCCGTGCTCATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGAGCACGGCACGCCAACATGGATGTaGCCACCGTGGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: QLGRPGLAQDGTKGDEHGTPTWM*PPWKEW
Trigger: CCACTCCTTCCACGGTGGCCACATCCATGTTGGCGT...GCCGTGCTCATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGCACCAAAGGTGCCATGAGCAGCAGCTaGGTAGGCCCGGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LGPVQNPRKDEPEVGTKGAMSSS*VGPVLP
Trigger: GGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGC...ACCTTTGGTGCCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCTCTCACCTGGGGAGGTaGGGTGAGAGGCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: QSGWASGEVPPIVPSYGPSHLGR*GERQHP
Trigger: GGGGTGCTGCCTCTCACCCCACCTCCCCAGGTGAGA...GGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000451864.6
ENST00000620376.4
CDS-3UTR CCA 90 bp GCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTATCTCACCTGGGGAGGTaGGGTGAGAGGCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: ALLQLGPVQNPRKDEPEVSHLGR*GERQHP
Trigger: GGGGTGCTGCCTCTCACCCCACCTCCCCAGGTGAGA...TACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451864.6
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGGAGTCCAGAAAGGGTAGCTTCAGCAGGAGCCCTCCAAGGCCCCCGCCCACATTGCTCTTCTCCAGCTaGGGCCTGTACAGAACCCGC +
Preference number: 4 (lower is better)
Translates to: GESRKGSFSRSPPRPPPTLLFSS*GLYRTR
Trigger: GCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA...TGTGGGCGGGGGCCTTGGAGGGCTCCTGCTGAAGCTACCCTTTCTGGACTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp AGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCAGCATGGCCTGTGACGTaGCACTGCGCTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SRVGHLVRFPLLYPVTAPAWPVT*HCAGPR
Trigger: CCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGC...TGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGTGCTGGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCAGCCGAAGAGCTGGTGCATaGCCTGTGACGTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: GAGSQGVVCVEGRPMLPSRRAGA*PVTWHC
Trigger: GCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCG...GCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTCTCAGGGGCTGGCAGTaGGTTAGGCCTGAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GACPLRGWQWVRPECLPPLRGWQ*VRPECL
Trigger: CAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAG...AGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTACCCTCAACCAGGCCTaGCTTGGGCTTCACTGTAAC +
Preference number: 4 (lower is better)
Translates to: SPKSWCMACDVALRWPSATLNQA*LGLHCN
Trigger: GTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGT...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CCCAGCCCCCAGCGCTGTGAGTGCAGCATTGAAGCTAGGCCAGAAGATCCACAGCGGCACCAAAGGAGATaGGCACGGCCCCCGCACAAA +
Preference number: 4 (lower is better)
Translates to: PSPQRCECSIEARPEDPQRHQRR*ARPPHK
Trigger: TTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCCG...CTGTGGATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGCGCTGGGGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCCGGCACCAAAGGAGATaGGCACGGCCCCCGCACAAA +
Preference number: 4 (lower is better)
Translates to: VGHLVRFPLLYPVTAPLPRHQRR*ARPPHK
Trigger: TTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCCG...GGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTCTCACCCCCAGGAGATaGAGGAGCACAAACTCATTG +
Preference number: 4 (lower is better)
Translates to: SPKSWCMACDVALRWPSALTPRR*RSTNSL
Trigger: CAATGAGTTTGTGCTCCTTCATCTCCTGGGGGTGAG...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGTGCTGGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCAGCCATGGCGAAGAGGTCTaGATGGTAGACGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GAGSQGVVCVEGRPMLPSHGEEV*MVDGAL
Trigger: CAGGGCTCCGTCTACCATTCAGACCTCTTCGCCATG...GCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp ACAAACAGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCCATGGCGAAGAGGTCTaGATGGTAGACGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TNSPKSWCMACDVALRWPHGEEV*MVDGAL
Trigger: CAGGGCTCCGTCTACCATTCAGACCTCTTCGCCATG...GGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCGCGTTACTGTGGTTaGTCCGGTGCCAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GQSGWASGEVPPIVPSYGPRYCG*SGARGQ
Trigger: CTGCCCTCTGGCACCGGAGCAACCACAGTAACGCGG...GCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCCGCGTTACTGTGGTTaGTCCGGTGCCAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPPRYCG*SGARGQ
Trigger: CTGCCCTCTGGCACCGGAGCAACCACAGTAACGCGG...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGCACCAAAGGTACCAGTGTGGACCACTaGAGGGCAAAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LGPVQNPRKDEPEVGTKGTSVDH*RAKAAR
Trigger: CCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGT...ACCTTTGGTGCCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCACCAGTGTGGACCACTaGAGGGCAAAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VGHLVRFPLLYPVTAPLPTSVDH*RAKAAR
Trigger: CCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGT...GGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTAGCCCTGGCGGTGCTTaGTCTTCTCCAGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SGWASGEVPPIVPSYGPTSPGGA*SSPAGA
Trigger: GGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCT...AGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGTGCTGGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCAGCCTGACAAGGCAAAGGTaGCAAGGGTGCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GAGSQGVVCVEGRPMLPSLTRQR*QGCWQP
Trigger: TGGCTGCCAGCACCCTTGGCACCTTTGCCTTGTCAG...GCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCACCATGGAGGAGGGTaGCACCCAGTGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: SGWASGEVPPIVPSYGPTHHGGG*HPVPQG
Trigger: GCCCTGTGGCACTGGGTGGCACCCTCCTCCATGGTG...AGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451864.6
CDS-3UTR GCA 90 bp ATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCTCCCTGTGGAGACGCTaGCTGTGGAAAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: MACDVALRWPSAMSGNTLSLWRR*LWKGAS
Trigger: GGAGGCCCCTTTCCACAGGCAGCGTCTCCACAGGGA...GAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp ATGAGCAGCAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGCCGAGATTGCGCCGTTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: MSSSWVGPVLPRTAPKEMPRLRR*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAACGGCGCAATCTCGG...CATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612897.4
CDS-3UTR GCA 90 bp CAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGAGCACGGCCCCTCCAGCCAGCGCTaGATTTTGGATGTGGACCAT +
Preference number: 4 (lower is better)
Translates to: QLGRPGLAQDGTKGDEHGPSSQR*ILDVDH
Trigger: ATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGG...GCCGTGCTCATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp AAGAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGACCCGGCCATGGGTTaGGCTGCGATCTCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KNLYPSVETVPAKKPAARDPAMG*AAISAG
Trigger: GCCAGCCGAGATCGCAGCCCAACCCATGGCCGGGTC...TCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612897.4
ENST00000613460.4
CDS-3UTR CCA 90 bp CAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCCAAAGAGGACGGCAGTaGCGCCCTGGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QSGWASGEVPPIVPSYGPQRGRQ*RPGGRG
Trigger: GCCTCTTCCTCCAGGGCGCCACTGCCGTCCTCTTTG...GGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCCAAAGAGGACGGCAGTaGCGCCCTGGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: MACDVALRWPSAMSGNTLQRGRQ*RPGGRG
Trigger: GCCTCTTCCTCCAGGGCGCCACTGCCGTCCTCTTTG...GAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCAGCCCTGGACCAGTGTaGACCACTGCAGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VLALLQLGPVQNPRKDEPSPGPV*TTAGQR
Trigger: CCTTTGCCCTGCAGTGGTCCACACTGGTCCAGGGCT...GGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTTGGATGTGGCCACCGTaGAAGGAGTGGAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GACPLRGWQWVRPECLPPWMWPP*KEWRKP
Trigger: GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCA...AGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TTGAGGGCCGTCCGATGCTGCCCAGCCCCCAGCGCTGTGAGTGCAGCATTGAAGACCCCCGGCATCCCATaGAGGTTGTGGACTCCACAT +
Preference number: 4 (lower is better)
Translates to: LRAVRCCPAPSAVSAALKTPGIP*RLWTPH
Trigger: ATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGT...CTTCAATGCTGCACTCACAGCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGTGCTGGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCAGCACCCCCGGCATCCCATaGAGGTTGTGGACTCCACAT +
Preference number: 4 (lower is better)
Translates to: GAGSQGVVCVEGRPMLPSTPGIP*RLWTPH
Trigger: ATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGT...GCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCGACGTGGCACTGCGCTaGCCCTCGGCTATGAGTGGA +
Preference number: 4 (lower is better)
Translates to: GQSGWASGEVPPIVPSYGDVALR*PSAMSG
Trigger: TCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTC...GCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCGACGTGGCACTGCGCTaGCCCTCGGCTATGAGTGGA +
Preference number: 4 (lower is better)
Translates to: MACDVALRWPSAMSGNTLDVALR*PSAMSG
Trigger: TCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTC...GAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp AAGAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCATGGCCTGTGACGTaGCACTGCGCTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: KNLYPSVETVPAKKPAARAWPVT*HCAGPR
Trigger: CCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGC...TCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCCCTGTCCTCTCAGGGGCTaGCAGTGGGTTAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TCTPAWRQSQPRSQLPEPCPLRG*QWVRPE
Trigger: CTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACA...GGGCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTCCACCCTCAGCCTCCTTCTGGCTCATaGCTCCCTTCTTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSGAGSGLGLSVCLLHPQPPSGS*LPSCSW
Trigger: CCAGCTGCAAGAAGGGAGCCATGAGCCAGAAGGAGG...CTGAGGGTGGAGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ACAAACAGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCCCTCCTTCTGGCTCATaGCTCCCTTCTTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TNSPKSWCMACDVALRWPPPSGS*LPSCSW
Trigger: CCAGCTGCAAGAAGGGAGCCATGAGCCAGAAGGAGG...GGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCAGCCCCCAGACTTGTACCCCAGCGTaGAGACAGTCCCAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GSQGVVCVEGRPMLPSPQTCTPA*RQSQPR
Trigger: TCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGT...CTGGGGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CGGTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCATGGCGAAGAGGTCTaGATGGTAGACGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RCLLFSSWGLYRTRERTSHGEEV*MVDGAL
Trigger: CAGGGCTCCGTCTACCATTCAGACCTCTTCGCCATG...GCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCGGGAGTAGTATGTGTTaGGGGCCGTCCGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQSGWASGEVPPIVPSYGGSSMC*GPSDAA
Trigger: GGCAGCATCGGACGGCCCTCAACACATACTACTCCC...GCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGCACCAAAGGTGTGGGAGTAGTATGTGTTaGGGGCCGTCCGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: GACTEPAKGRARSRHQRCGSSMC*GPSDAA
Trigger: GGCAGCATCGGACGGCCCTCAACACATACTACTCCC...ACACCTTTGGTGCCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp ATCACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCTGTGGTTGCTCCGGTaGCAGAGGGCAGCGTCGGTT +
Preference number: 4 (lower is better)
Translates to: ITLNQAWLGLHCNCVTWGLWLLR*QRAASV
Trigger: AACCGACGCTGCCCTCTGGCACCGGAGCAACCACAG...GCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGACCAGTGTGGACCACTaGAGGGCAAAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AWLGLHCNCVTWGQWITWTSVDH*RAKAAR
Trigger: CCTGGCCGCCTTTGCCCTGCAGTGGTCCACACTGGT...CCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp ACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCCCCCCCAGCGCTGTGAGTaGAGCATTGAAGCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: TCTPAWRQSQPRSQLPEPPQRCE*SIEARP
Trigger: TGGCCTAGCTTCAATGCTGCACTCACAGCGCTGGGG...GGGCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CGGTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCAAAGGTGCCAAGGGTaGTGGCAGCCAGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: RCLLFSSWGLYRTRERTSQRCQG*WQPGSS
Trigger: ACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTG...GCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGAGCCCGAAGAGCTGGTaGATGGCCTGTGACGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLFSSWGLYRTRERTSPKSPKSW*MACDVA
Trigger: TGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT...CTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp AAAGGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTAGCCCGAAGAGCTGGTaGATGGCCTGTGACGTGGCA +
Preference number: 4 (lower is better)
Translates to: KGACPLRGWQWVRPECLPSPKSW*MACDVA
Trigger: TGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT...AGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp ATGAGCAGCAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGTTAGGCCTGAGTGTCTaGCTCCTCCACCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: MSSSWVGPVLPRTAPKEMLGLSV*LLHPQR
Trigger: CCTCTGAGGGTGGAGGAGGCAGACACTCAGGCCTAA...CATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp AGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCATCCCTGTGGAGACGCTaGCTGTGGAAAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SRVGHLVRFPLLYPVTAPSLWRR*LWKGAS
Trigger: GGAGGCCCCTTTCCACAGGCAGCGTCTCCACAGGGA...TGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTTCCCTGTGGAGACGCTaGCTGTGGAAAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SGWASGEVPPIVPSYGPTSLWRR*LWKGAS
Trigger: GGAGGCCCCTTTCCACAGGCAGCGTCTCCACAGGGA...AGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCCCTCTTCTACCCATGTaGAGGCTGGTAGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: VLALLQLGPVQNPRKDEPPLLPM*RLVGQS
Trigger: CGACTGCCCTACCAGCCTGCACATGGGTAGAAGAGG...GGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCGACCCGGCCATGGGTTaGGCTGCGATCTCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HCNCVTWGQWITWVPQFGDPAMG*AAISAG
Trigger: GCCAGCCGAGATCGCAGCCCAACCCATGGCCGGGTC...GCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
CDS-3UTR CCA 90 bp GATGAGCACGGCCCCCGCACAAAAGTCAGCATTGATCATGCTCTCCACGCCAACACGGCAGTGGCGCCCTaGAGGAAGAGGCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: DEHGPRTKVSIDHALHANTAVAP*RKRHSR
Trigger: CCTGCTGTGCCTCTTCCTCCAGGGCGCCACTGCCGT...GTTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTGCGGGGGCCGTGCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CCCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGATTGTCCGCGTTACTGTaGTTGCTCCGGTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PPGPPASHGGCGLHMCLGLSALL*LLRCQR
Trigger: CCTCTGGCACCGGAGCAACCACAGTAACGCGGACAA...TCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CGGTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCTTGTCCGCGTTACTGTaGTTGCTCCGGTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RCLLFSSWGLYRTRERTSLSALL*LLRCQR
Trigger: CCTCTGGCACCGGAGCAACCACAGTAACGCGGACAA...GCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp AAAGGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTAGCCCTGGACCAGTGTaGACCACTGCAGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KGACPLRGWQWVRPECLPSPGPV*TTAGQR
Trigger: CCTTTGCCCTGCAGTGGTCCACACTGGTCCAGGGCT...AGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCAGGTGCCAAGGGTGCTaGCAGCCAGGGAGTAGTATG +
Preference number: 4 (lower is better)
Translates to: VLALLQLGPVQNPRKDEPRCQGC*QPGSSM
Trigger: CATACTACTCCCTGGCTGCCAGCACCCTTGGCACCT...GGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGCGAAGAGCTGGTGCATaGCCTGTGACGTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SSPAGACTEPAKGRARSRRRAGA*PVTWHC
Trigger: GCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCG...CCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTACTCAGGGGCTGGCAGTaGGTTAGGCCTGAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: ALLQLGPVQNPRKDEPEVLRGWQ*VRPECL
Trigger: CAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAG...TACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCCTCAGGGGCTGGCAGTaGGTTAGGCCTGAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VGHLVRFPLLYPVTAPLPLRGWQ*VRPECL
Trigger: CAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAG...GGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGCTCAGGGGCTGGCAGTaGGTTAGGCCTGAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LLFSSWGLYRTRERTSPKLRGWQ*VRPECL
Trigger: CAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAG...CTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGTGTCCTCTCAGGGGCTaGCAGTGGGTTAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SSPAGACTEPAKGRARSRCPLRG*QWVRPE
Trigger: CTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACA...CCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCTGTCCTCTCAGGGGCTaGCAGTGGGTTAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPCPLRG*QWVRPE
Trigger: CTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACA...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTGGAGACGCTGCCTGTaGAAAGGGGCCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLFSSWGLYRTRERTSPKWRRCL*KGASFW
Trigger: CCAGAAGGAGGCCCCTTTCCACAGGCAGCGTCTCCA...CTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCTGGAGACGCTGCCTGTaGAAAGGGGCCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VGHLVRFPLLYPVTAPLPWRRCL*KGASFW
Trigger: CCAGAAGGAGGCCCCTTTCCACAGGCAGCGTCTCCA...GGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CCCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGATTGCCCCTCTCCCTGTaGAGACGCTGCCTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PPGPPASHGGCGLHMCLGLPLSL*RRCLWK
Trigger: TTTCCACAGGCAGCGTCTCCACAGGGAGAGGGGCAA...TCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTCCACCCTCAGGGCCAGTGGATCACTTaGGTGCCTCAATTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSGAGSGLGLSVCLLHPQGQWIT*VPQFGL
Trigger: GAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCC...CTGAGGGTGGAGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ATGAGCAGCAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGGTGACGTGGGGCCAGTaGATCACTTGGGTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: MSSSWVGPVLPRTAPKEMVTWGQ*ITWVPQ
Trigger: TTGAGGCACCCAAGTGATCCACTGGCCCCACGTCAC...CATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCGCTGCAGGAAGACCATaGGGAAGCCAAAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: GQSGWASGEVPPIVPSYGAAGRP*GSQSPR
Trigger: TCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAGC...GCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GCCCCCGCCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGGCTGCAGGAAGACCATaGGGAAGCCAAAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: APAHRGKHQCDKQPEELVAAGRP*GSQSPR
Trigger: TCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAGC...CACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGCACCAAAGGTGTGCTGCAGGAAGACCATaGGGAAGCCAAAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: GACTEPAKGRARSRHQRCAAGRP*GSQSPR
Trigger: TCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAGC...ACACCTTTGGTGCCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CCACCACAACCCCTCCAGCCAGCGCTGCATTTTGGATGTGGACCATGTCAAGCCGGGAGTAGTATGTGTTaGGGGCCGTCCGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: PPQPLQPALHFGCGPCQAGSSMC*GPSDAA
Trigger: GGCAGCATCGGACGGCCCTCAACACATACTACTCCC...GGCTTGACATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGGGTTGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CGGTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCTTCCCCTACAAGGGCTaGCAAGGCAAAGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RCLLFSSWGLYRTRERTSFPYKG*QGKGAK
Trigger: CTTGGCACCTTTGCCTTGTCAGCCCTTGTAGGGGAA...GCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCGGGTTGGGCATCTGGTaGGGTTCCCCCTATTGTACC +
Preference number: 4 (lower is better)
Translates to: QSGWASGEVPPIVPSYGPGLGIW*GSPYCT
Trigger: GGTACAATAGGGGGAACCTCACCAGATGCCCAACCC...GGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp ATGAGCAGCAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGCAGCATCATTTCACTTaGGGTCCCCACCACAACCCC +
Preference number: 4 (lower is better)
Translates to: MSSSWVGPVLPRTAPKEMQHHFT*GPHHNP
Trigger: GGGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTG...CATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGGGTGAGCCGAGATTGTaGCATTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLFSSWGLYRTRERTSPKGEPRL*HCTPAW
Trigger: CCAGGCTGGAGTGCAATGGCACAATCTCGGCTCACC...CTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp ATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGAGTCTGGCCCCAGCGCTGTGAGTaGAGCATTGAAGCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: MLARHLPVNLVLVVLGVWPQRCE*SIEARP
Trigger: TGGCCTAGCTTCAATGCTGCACTCACAGCGCTGGGG...CCAGACTCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCCAAAGGTGCCAAGGGTaGTGGCAGCCAGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: VGHLVRFPLLYPVTAPLPQRCQG*WQPGSS
Trigger: ACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTG...GGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GCCCCCGCCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCTGACAAGGCAAAGGTaGCAAGGGTGCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: APAHRGKHQCDKQPEELVLTRQR*QGCWQP
Trigger: TGGCTGCCAGCACCCTTGGCACCTTTGCCTTGTCAG...CACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGCTGACAAGGCAAAGGTaGCAAGGGTGCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLFSSWGLYRTRERTSPKLTRQR*QGCWQP
Trigger: TGGCTGCCAGCACCCTTGGCACCTTTGCCTTGTCAG...CTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GCCCCCGCCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGTGGGCTTTATCCTCATaGTCGCCAGGCACCTGCCAG +
Preference number: 4 (lower is better)
Translates to: APAHRGKHQCDKQPEELVWALSS*SPGTCQ
Trigger: CTGGCAGGTGCCTGGCGAGCATGAGGATAAAGCCCA...CACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCTGGGCTTTATCCTCATaGTCGCCAGGCACCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GQSGWASGEVPPIVPSYGWALSS*SPGTCQ
Trigger: CTGGCAGGTGCCTGGCGAGCATGAGGATAAAGCCCA...GCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCTGGGCTTTATCCTCATaGTCGCCAGGCACCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ELVPQRGDSPSQEASCQSWALSS*SPGTCQ
Trigger: CTGGCAGGTGCCTGGCGAGCATGAGGATAAAGCCCA...GCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCTTAGGCCTGAGTGTCTaGCTCCTCCACCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VGHLVRFPLLYPVTAPLPLGLSV*LLHPQR
Trigger: CCTCTGAGGGTGGAGGAGGCAGACACTCAGGCCTAA...GGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp ATCCTCATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGATTCCCAGCCTCCTGTTaGCCCTCTCCCTGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: ILMLARHLPVNLVLVVLGFPASC*PSPCGD
Trigger: GTCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAA...TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCATGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGCACCAAAGGTGTGCCTCTTCTACCCATGTaGAGGCTGGTAGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GPVQNPRKDEPEVGTKGVPLLPM*RLVGQS
Trigger: CGACTGCCCTACCAGCCTGCACATGGGTAGAAGAGG...CACACCTTTGGTGCCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CCCAGCCCCCAGCGCTGTGAGTGCAGCATTGAAGCTAGGCCAGAAGATCCACAGAGCCAAGAAGCCAGCTaGCAGAGCCCCAAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PSPQRCECSIEARPEDPQSQEAS*QSPKGC
Trigger: ACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCT...CTGTGGATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGCGCTGGGGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp AAGAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGACAAAGAGGACGGCAGTaGCGCCCTGGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: KNLYPSVETVPAKKPAARQRGRQ*RPGGRG
Trigger: GCCTCTTCCTCCAGGGCGCCACTGCCGTCCTCTTTG...TCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp AACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCAGCCCTGGACCAGTGTaGACCACTGCAGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: NQAWLGLHCNCVTWGQWISPGPV*TTAGQR
Trigger: CCTTTGCCCTGCAGTGGTCCACACTGGTCCAGGGCT...GATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACCGTGGAAGGAGTaGAGAAAGCCCTGGACCAGT +
Preference number: 4 (lower is better)
Translates to: GSRVGHLVRFPLLYPVTAPPWKE*RKPWTS
Trigger: ACTGGTCCAGGGCTTTCTCCACTCCTTCCACGGTGG...GGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCACCGTGGAAGGAGTaGAGAAAGCCCTGGACCAGT +
Preference number: 4 (lower is better)
Translates to: GQSGWASGEVPPIVPSYGPPWKE*RKPWTS
Trigger: ACTGGTCCAGGGCTTTCTCCACTCCTTCCACGGTGG...GCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCTGGATGTGGCCACCGTaGAAGGAGTGGAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPWMWPP*KEWRKP
Trigger: GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCA...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTACTCTCCACGCCAACATaGATGTGGCCACCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ALLQLGPVQNPRKDEPEVLSTPT*MWPPWK
Trigger: CTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAG...TACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCTCTCCACGCCAACATaGATGTGGCCACCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GSRVGHLVRFPLLYPVTALSTPT*MWPPWK
Trigger: CTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAG...GGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CACAAACTCATTGATGCCAAACAGCACCACCTCCAGCAGGGCCATGAGCAGCAGGCCATGAGCAGCAGCTaGGTAGGCCCGGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: HKLIDAKQHHLQQGHEQQAMSSS*VGPVLP
Trigger: GGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGC...CTGCTGCTCATGGCCCTGCTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTAGCCATGAGCAGCAGCTaGGTAGGCCCGGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LCDVGPVDHLGASIWPLLAMSSS*VGPVLP
Trigger: GGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGC...TAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGACCCCCGGCATCCCATaGAGGTTGTGGACTCCACAT +
Preference number: 4 (lower is better)
Translates to: SSPAGACTEPAKGRARSRTPGIP*RLWTPH
Trigger: ATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGT...CCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCACCCCCGGCATCCCATaGAGGTTGTGGACTCCACAT +
Preference number: 4 (lower is better)
Translates to: GQSGWASGEVPPIVPSYGTPGIP*RLWTPH
Trigger: ATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGT...GCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCACCCCCGGCATCCCATaGAGGTTGTGGACTCCACAT +
Preference number: 4 (lower is better)
Translates to: VGHLVRFPLLYPVTAPLPTPGIP*RLWTPH
Trigger: ATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGT...GGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCGACGTGGCACTGCGCTaGCCCTCGGCTATGAGTGGA +
Preference number: 4 (lower is better)
Translates to: PTEANISVTNSPKSWCMADVALR*PSAMSG
Trigger: TCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTC...GGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCAACAGCCCGAAGAGCTaGTGCATGGCCTGTGACGTG +
Preference number: 4 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPNSPKS*CMACDV
Trigger: CACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTT...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCCTCCTTCTGGCTCATaGCTCCCTTCTTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPPPSGS*LPSCSW
Trigger: CCAGCTGCAAGAAGGGAGCCATGAGCCAGAAGGAGG...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCAAAGGGGCCTCCTTCTaGCTCATGGCTCCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: VLALLQLGPVQNPRKDEPKGASF*LMAPFL
Trigger: CAAGAAGGGAGCCATGAGCCAGAAGGAGGCCCCTTT...GGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCTTGCCCCTCTCCCTGTaGAGACGCTGCCTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GSRVGHLVRFPLLYPVTALPLSL*RRCLWK
Trigger: TTTCCACAGGCAGCGTCTCCACAGGGAGAGGGGCAA...GGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTATTGCCCCTCTCCCTGTaGAGACGCTGCCTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ALLQLGPVQNPRKDEPEVLPLSL*RRCLWK
Trigger: TTTCCACAGGCAGCGTCTCCACAGGGAGAGGGGCAA...TACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTGCCAGCGCTGCATTTTaGATGTGGACCATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: GACPLRGWQWVRPECLPPASAAF*MWTMSS
Trigger: GCTTGACATGGTCCACATCCAAAATGCAGCGCTGGC...AGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GCCCCCGCCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGGTGACGTGGGGCCAGTaGATCACTTGGGTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: APAHRGKHQCDKQPEELVVTWGQ*ITWVPQ
Trigger: TTGAGGCACCCAAGTGATCCACTGGCCCCACGTCAC...CACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCCCACCCTCAACCAGGCCTaGCTTGGGCTTCACTGTAAC +
Preference number: 4 (lower is better)
Translates to: TCTPAWRQSQPRSQLPEPTLNQA*LGLHCN
Trigger: GTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGT...GGGCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCACCCTCAACCAGGCCTaGCTTGGGCTTCACTGTAAC +
Preference number: 4 (lower is better)
Translates to: GTALALGYEWKHTLQAISTLNQA*LGLHCN
Trigger: GTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGT...GGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GCGTTTATCACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGCGGCACCAAAGGAGATaGGCACGGCCCCCGCACAAA +
Preference number: 4 (lower is better)
Translates to: AFITLNQAWLGLHCNCVTRHQRR*ARPPHK
Trigger: TTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCCG...CGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGATAAACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp AACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCCATGGCGAAGAGGTCTaGATGGTAGACGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: NQAWLGLHCNCVTWGQWIHGEEV*MVDGAL
Trigger: CAGGGCTCCGTCTACCATTCAGACCTCTTCGCCATG...GATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCGGGAGTAGTATGTGTTaGGGGCCGTCCGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: PTEANISVTNSPKSWCMAGSSMC*GPSDAA
Trigger: GGCAGCATCGGACGGCCCTCAACACATACTACTCCC...GGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGGGGAGTAGTATGTGTTaGGGGCCGTCCGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: GPVDHLGASIWPLLPMCRGSSMC*GPSDAA
Trigger: GGCAGCATCGGACGGCCCTCAACACATACTACTCCC...CCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp TCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGTTCCCCTACAAGGGCTaGCAAGGCAAAGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SSPAGACTEPAKGRARSRFPYKG*QGKGAK
Trigger: CTTGGCACCTTTGCCTTGTCAGCCCTTGTAGGGGAA...CCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GAAACACACTCTCCAGGCCATCTCCGTAAGCTTCATGGGTGGCAAGTCCAGCCACTGTGGTTGCTCCGGTaGCAGAGGGCAGCGTCGGTT +
Preference number: 4 (lower is better)
Translates to: ETHSPGHLRKLHGWQVQPLWLLR*QRAASV
Trigger: AACCGACGCTGCCCTCTGGCACCGGAGCAACCACAG...TGGCTGGACTTGCCACCCATGAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp ACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTCTGTGGTTGCTCCGGTaGCAGAGGGCAGCGTCGGTT +
Preference number: 4 (lower is better)
Translates to: TWGQWITWVPQFGLFYPCLWLLR*QRAASV
Trigger: AACCGACGCTGCCCTCTGGCACCGGAGCAACCACAG...ACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGCACCAAAGGAGATGAGCACGGCCCCCGCACAAAAGTCAGCATTGATCATGCTCTGTGGTTGCTCCGGTaGCAGAGGGCAGCGTCGGTT +
Preference number: 4 (lower is better)
Translates to: GTKGDEHGPRTKVSIDHALWLLR*QRAASV
Trigger: AACCGACGCTGCCCTCTGGCACCGGAGCAACCACAG...AGCATGATCAATGCTGACTTTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CACAAACTCATTGATGCCAAACAGCACCACCTCCAGCAGGGCCATGAGCAGCAGCCGCGTTACTGTGGTTaGTCCGGTGCCAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HKLIDAKQHHLQQGHEQQPRYCG*SGARGQ
Trigger: CTGCCCTCTGGCACCGGAGCAACCACAGTAACGCGG...CTGCTGCTCATGGCCCTGCTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp AGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCAGGTGAGCCGAGATTGTaGCATTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SRVGHLVRFPLLYPVTAPGEPRL*HCTPAW
Trigger: CCAGGCTGGAGTGCAATGGCACAATCTCGGCTCACC...TGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp AACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGGTTGAGGGCCGTCCGATaGTGCCCAGCCCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: NFLVAASQHLRKGACPLRLRAVR*CPAPSA
Trigger: AGCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAA...CCTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCAAAGGTGCCAAGGGTaGTGGCAGCCAGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SGWASGEVPPIVPSYGPTQRCQG*WQPGSS
Trigger: ACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTG...AGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGAGCCCGAAGAGCTGGTaGATGGCCTGTGACGTGGCA +
Preference number: 4 (lower is better)
Translates to: GASGSLGCLNLASSTHVQSPKSW*MACDVA
Trigger: TGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT...CTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp ATCCTCATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGATTAGGCCTGAGTGTCTaGCTCCTCCACCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: ILMLARHLPVNLVLVVLGLGLSV*LLHPQR
Trigger: CCTCTGAGGGTGGAGGAGGCAGACACTCAGGCCTAA...TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCATGAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCTCATGGCTCCCTTCTTaGAGCTGGAGGAATGGGAGC +
Preference number: 4 (lower is better)
Translates to: QSGWASGEVPPIVPSYGPSWLPS*SWRNGS
Trigger: GCTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGA...GGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTCCCTGTGGAGACGCTaGCTGTGGAAAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CNCVTWGQWITWVPQFGLSLWRR*LWKGAS
Trigger: GGAGGCCCCTTTCCACAGGCAGCGTCTCCACAGGGA...GAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp AACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCCCTCTTCTACCCATGTaGAGGCTGGTAGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: NQAWLGLHCNCVTWGQWIPLLPM*RLVGQS
Trigger: CGACTGCCCTACCAGCCTGCACATGGGTAGAAGAGG...GATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ATCCTCATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGATTGTCCGCGTTACTGTaGTTGCTCCGGTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ILMLARHLPVNLVLVVLGLSALL*LLRCQR
Trigger: CCTCTGGCACCGGAGCAACCACAGTAACGCGGACAA...TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCATGAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGGAGTCCAGAAAGGGTAGCTTCAGCAGGAGCCCTGGTGGTGGTAGGGGAGGAATGGCATGCACGTCCTaGAAGCCTGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GESRKGSFSRSPGGGRGGMACTS*KPVIPA
Trigger: AGCTGGGATTACAGGCTTCCAGGACGTGCATGCCAT...TCCTCCCCTACCACCACCAGGGCTCCTGCTGAAGCTACCCTTTCTGGACTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451864.6
CDS-3UTR CCA 90 bp GGACCATGTCAAGCCTCCCATCTTCCCCTACAAGGGCTGACAAGGCAAAGGTGCAGCCCTGGACCAGTGTaGACCACTGCAGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GPCQASHLPLQGLTRQRCSPGPV*TTAGQR
Trigger: CCTTTGCCCTGCAGTGGTCCACACTGGTCCAGGGCT...GCACCTTTGCCTTGTCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CCACCACAACCCCTCCAGCCAGCGCTGCATTTTGGATGTGGACCATGTCAAGCCTGGATGTGGCCACCGTaGAAGGAGTGGAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: PPQPLQPALHFGCGPCQAWMWPP*KEWRKP
Trigger: GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCA...GGCTTGACATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGGGTTGTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ATCACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCAGGTGCCAAGGGTGCTaGCAGCCAGGGAGTAGTATG +
Preference number: 4 (lower is better)
Translates to: ITLNQAWLGLHCNCVTWGRCQGC*QPGSSM
Trigger: CATACTACTCCCTGGCTGCCAGCACCCTTGGCACCT...GCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCCGTAAGCTTCATGGGTaGCAAGTCCAGCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: VLALLQLGPVQNPRKDEPRKLHG*QVQPQG
Trigger: TCCTTGTGGCTGGACTTGCCACCCATGAAGCTTACG...GGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGCCTCAGGGGCTGGCAGTaGGTTAGGCCTGAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GQWITWVPQFGLFYPCAGLRGWQ*VRPECL
Trigger: CAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAG...GCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGCTGTCCTCTCAGGGGCTaGCAGTGGGTTAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GQWITWVPQFGLFYPCAGCPLRG*QWVRPE
Trigger: CTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACA...GCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp AACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCTTGCCCCTCTCCCTGTaGAGACGCTGCCTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: NQAWLGLHCNCVTWGQWILPLSL*RRCLWK
Trigger: TTTCCACAGGCAGCGTCTCCACAGGGAGAGGGGCAA...GATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCGGCCAGTGGATCACTTaGGTGCCTCAATTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: MACDVALRWPSAMSGNTLGQWIT*VPQFGL
Trigger: GAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCC...GAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTGTGACGTGGGGCCAGTaGATCACTTGGGTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: SGWASGEVPPIVPSYGPTVTWGQ*ITWVPQ
Trigger: TTGAGGCACCCAAGTGATCCACTGGCCCCACGTCAC...AGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ATGAGCAGCAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGTGTAACTGTGTGACGTaGGGCCAGTGGATCACTTGG +
Preference number: 4 (lower is better)
Translates to: MSSSWVGPVLPRTAPKEMCNCVT*GQWITW
Trigger: CCAAGTGATCCACTGGCCCCACGTCACACAGTTACA...CATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp ATGAGCAGCAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGGGAGCACAAACTCATTaGTGCCAAACAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: MSSSWVGPVLPRTAPKEMGAQTH*CQTAPP
Trigger: AGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCC...CATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp AAGGGTGCTGGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCGGAGCACAAACTCATTaGTGCCAAACAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: KGAGSQGVVCVEGRPMLPGAQTH*CQTAPP
Trigger: AGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCC...GGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCGGAGCACAAACTCATTaGTGCCAAACAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: GTALALGYEWKHTLQAISGAQTH*CQTAPP
Trigger: AGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCC...GGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTACTCACCCCCAGGAGATaGAGGAGCACAAACTCATTG +
Preference number: 4 (lower is better)
Translates to: ALLQLGPVQNPRKDEPEVLTPRR*RSTNSL
Trigger: CAATGAGTTTGTGCTCCTTCATCTCCTGGGGGTGAG...TACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGCCATGGCGAAGAGGTCTaGATGGTAGACGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GQWITWVPQFGLFYPCAGHGEEV*MVDGAL
Trigger: CAGGGCTCCGTCTACCATTCAGACCTCTTCGCCATG...GCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp TCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTTTCCCCTACAAGGGCTaGCAAGGCAAAGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SGWASGEVPPIVPSYGPTFPYKG*QGKGAK
Trigger: CTTGGCACCTTTGCCTTGTCAGCCCTTGTAGGGGAA...AGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GCCCCCGCCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGTTCACTGTAACTGTGTaGCGTGGGGCCAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: APAHRGKHQCDKQPEELVFTVTV*RGASGS
Trigger: TGATCCACTGGCCCCACGTCACACAGTTACAGTGAA...CACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGCCCCAGCGCTGTGAGTaGAGCATTGAAGCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GASGSLGCLNLASSTHVQPQRCE*SIEARP
Trigger: TGGCCTAGCTTCAATGCTGCACTCACAGCGCTGGGG...CTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCTGGGCTTTATCCTCATaGTCGCCAGGCACCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PTEANISVTNSPKSWCMAWALSS*SPGTCQ
Trigger: CTGGCAGGTGCCTGGCGAGCATGAGGATAAAGCCCA...GGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCTTAGGCCTGAGTGTCTaGCTCCTCCACCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PTEANISVTNSPKSWCMALGLSV*LLHPQR
Trigger: CCTCTGAGGGTGGAGGAGGCAGACACTCAGGCCTAA...GGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACTTCCCAGCCTCCTGTTaGCCCTCTCCCTGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: CVTWGQWITWVPQFGLFYFPASC*PSPCGD
Trigger: GTCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAA...GTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTAGTGGATCACTTGGGTaGCTCAATTTGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GACPLRGWQWVRPECLPPSGSLG*LNLASS
Trigger: AGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACT...AGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CGCTGCATTTTGGATGTGGACCATGTCAAGCCTCCCATCTTCCCCTACAAGGGCGCAGTGAGCCGAGATTaGGCCGTTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RCILDVDHVKPPIFPYKGAVSRD*AVALQP
Trigger: AGGCTGGAGTGCAACGGCGCAATCTCGGCTCACTGC...GCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612897.4
CDS-3UTR CCA 90 bp GGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGCCACCGTGGAAGGAGTaGAGAAAGCCCTGGACCAGT +
Preference number: 4 (lower is better)
Translates to: GASGSLGCLNLASSTHVQPPWKE*RKPWTS
Trigger: ACTGGTCCAGGGCTTTCTCCACTCCTTCCACGGTGG...CTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGCACGCCAACATGGATGTaGCCACCGTGGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GQWITWVPQFGLFYPCAGTPTWM*PPWKEW
Trigger: CCACTCCTTCCACGGTGGCCACATCCATGTTGGCGT...GCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGACCATGTCAAGCCTCCCATCTTCCCCTACAAGGGCTGACAAGGCAAAGGTGCACGCCAACATGGATGTaGCCACCGTGGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GPCQASHLPLQGLTRQRCTPTWM*PPWKEW
Trigger: CCACTCCTTCCACGGTGGCCACATCCATGTTGGCGT...GCACCTTTGCCTTGTCAGCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CACAGGGCACAGGGGTCTAGGAGGCATAAGACCAATATGATGCCTCCAAGGCCCCTCTCCACGCCAACATaGATGTGGCCACCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: HRAQGSRRHKTNMMPPRPLSTPT*MWPPWK
Trigger: CTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAG...GGGCCTTGGAGGCATCATATTGGTCTTATGCCTCCTAGACCCCTGTGCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451864.6
CDS-3UTR CCA 90 bp CCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCAGGTGCCAAGGGTGCTaGCAGCCAGGGAGTAGTATG +
Preference number: 4 (lower is better)
Translates to: PTEANISVTNSPKSWCMARCQGC*QPGSSM
Trigger: CATACTACTCCCTGGCTGCCAGCACCCTTGGCACCT...GGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TTGCAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGGCATGGCCTGTGACGTaGCACTGCGCTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LQLEEWELKKNFLVAASQAWPVT*HCAGPR
Trigger: CCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGC...CTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCCGAAGAGCTGGTGCATaGCCTGTGACGTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: CNCVTWGQWITWVPQFGLRRAGA*PVTWHC
Trigger: GCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCG...GAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp AAGAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAAACAGCCCGAAGAGCTaGTGCATGGCCTGTGACGTG +
Preference number: 4 (lower is better)
Translates to: KNLYPSVETVPAKKPAARNSPKS*CMACDV
Trigger: CACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTT...TCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCACCCTCAGAGGTCTCTaGGCTTTATCCTCATGCTCG +
Preference number: 4 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPTLRGL*ALSSCS
Trigger: CGAGCATGAGGATAAAGCCCAGAGACCTCTGAGGGT...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGCACCAAAGGAGATGAGCACGGCCCCCGCACAAAAGTCAGCATTGATCATGCTTGGAGACGCTGCCTGTaGAAAGGGGCCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GTKGDEHGPRTKVSIDHAWRRCL*KGASFW
Trigger: CCAGAAGGAGGCCCCTTTCCACAGGCAGCGTCTCCA...AGCATGATCAATGCTGACTTTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGACTTGGGTGCCTCAATTTaGCCTCTTCTACCCATGTGC +
Preference number: 4 (lower is better)
Translates to: PQDPRHPMEVVDSTCVLDLGASI*PLLPMC
Trigger: GCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAA...GTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTACTTGTACCCCAGCGTaGAGACAGTCCCAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SGWASGEVPPIVPSYGPTTCTPA*RQSQPR
Trigger: TCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGT...AGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ATCACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCACTTGTACCCCAGCGTaGAGACAGTCCCAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ITLNQAWLGLHCNCVTWGTCTPA*RQSQPR
Trigger: TCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGT...GCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGACTGGTGCATGGCCTGTaGCGTGGCACTGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: EEWELKKNFLVAASQHLRLVHGL*RGTALA
Trigger: GGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAG...TCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp TGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACGGGTTGGGCATCTGGTaGGGTTCCCCCTATTGTACC +
Preference number: 4 (lower is better)
Translates to: CVTWGQWITWVPQFGLFYGLGIW*GSPYCT
Trigger: GGTACAATAGGGGGAACCTCACCAGATGCCCAACCC...GTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCGTAAGCTTCCAGCATCATTTCACTTaGGGTCCCCACCACAACCCC +
Preference number: 4 (lower is better)
Translates to: LALGYEWKHTLQAISVSFQHHFT*GPHHNP
Trigger: GGGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTG...GAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCCAGCATCATTTCACTTaGGGTCCCCACCACAACCCC +
Preference number: 4 (lower is better)
Translates to: PTEANISVTNSPKSWCMAQHHFT*GPHHNP
Trigger: GGGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTG...GGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCGGTGAGCCGAGATTGTaGCATTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: HCNCVTWGQWITWVPQFGGEPRL*HCTPAW
Trigger: CCAGGCTGGAGTGCAATGGCACAATCTCGGCTCACC...GCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGCACCAAAGGAGATGAGCACGGCCCCCGCACAAAAGTCAGCATTGATCATGCTCCCCAGCGCTGTGAGTaGAGCATTGAAGCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GTKGDEHGPRTKVSIDHAPQRCE*SIEARP
Trigger: TGGCCTAGCTTCAATGCTGCACTCACAGCGCTGGGG...AGCATGATCAATGCTGACTTTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTTGAGGGCCGTCCGATaGTGCCCAGCCCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: QKELPSSSQSASSKRSVSLRAVR*CPAPSA
Trigger: AGCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAA...GGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTTTGAGGGCCGTCCGATaGTGCCCAGCCCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LEEWELKKNFLVAASQHLLRAVR*CPAPSA
Trigger: AGCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAA...AAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCAAAGGTGCCAAGGGTaGTGGCAGCCAGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: CVTWGQWITWVPQFGLFYQRCQG*WQPGSS
Trigger: ACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTG...GTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCTGACAAGGCAAAGGTaGCAAGGGTGCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CVTWGQWITWVPQFGLFYLTRQR*QGCWQP
Trigger: TGGCTGCCAGCACCCTTGGCACCTTTGCCTTGTCAG...GTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CGCTGCATTTTGGATGTGGACCATGTCAAGCCTCCCATCTTCCCCTACAAGGGCTTAGGCCTGAGTGTCTaGCTCCTCCACCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RCILDVDHVKPPIFPYKGLGLSV*LLHPQR
Trigger: CCTCTGAGGGTGGAGGAGGCAGACACTCAGGCCTAA...GCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CACAAACTCATTGATGCCAAACAGCACCACCTCCAGCAGGGCCATGAGCAGCAGCCTCTTCTACCCATGTaGAGGCTGGTAGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: HKLIDAKQHHLQQGHEQQPLLPM*RLVGQS
Trigger: CGACTGCCCTACCAGCCTGCACATGGGTAGAAGAGG...CTGCTGCTCATGGCCCTGCTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGACAGTGGATCACTTGGGTaGCTCAATTTGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PQDPRHPMEVVDSTCVLDSGSLG*LNLASS
Trigger: AGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACT...GTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCAGCCAAGAAGCCAGCTaGCAGAGCCCCAAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: CNCVTWGQWITWVPQFGLSQEAS*QSPKGC
Trigger: ACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCT...GAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTAAGCCAAGAAGCCAGCTaGCAGAGCCCCAAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LCDVGPVDHLGASIWPLLSQEAS*QSPKGC
Trigger: ACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCT...TAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTGTCCGCGTTACTGTaGTTGCTCCGGTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CNCVTWGQWITWVPQFGLLSALL*LLRCQR
Trigger: CCTCTGGCACCGGAGCAACCACAGTAACGCGGACAA...GAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTCCACGCCAACATaGATGTGGCCACCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: HCNCVTWGQWITWVPQFGLSTPT*MWPPWK
Trigger: CTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAG...GCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CGCTGCATTTTGGATGTGGACCATGTCAAGCCTCCCATCTTCCCCTACAAGGGCCTCTCCACGCCAACATaGATGTGGCCACCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RCILDVDHVKPPIFPYKGLSTPT*MWPPWK
Trigger: CTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAG...GCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATGCCATGAGCAGCAGCTaGGTAGGCCCGGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: QLEEWELKKNFLVAASQHAMSSS*VGPVLP
Trigger: GGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGC...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTGCTCTTCTCCAGCTaGGGCCTGTACAGAACCCGC +
Preference number: 4 (lower is better)
Translates to: CNCVTWGQWITWVPQFGLLLFSS*GLYRTR
Trigger: GCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA...GAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCAGATGGTCCCAATCATaGCGAAGAGGTCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: VLALLQLGPVQNPRKDEPRWSQS*RRGLNG
Trigger: ACCATTCAGACCTCTTCGCCATGATTGGGACCATCT...GGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAAACACACTCTCCAGGCCATCTCCGTAAGCTTCATGGGTGGCAAGTCCAGCCAAGGTGCCAAGGGTGCTaGCAGCCAGGGAGTAGTATG +
Preference number: 4 (lower is better)
Translates to: ETHSPGHLRKLHGWQVQPRCQGC*QPGSSM
Trigger: CATACTACTCCCTGGCTGCCAGCACCCTTGGCACCT...TGGCTGGACTTGCCACCCATGAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCTGAGGTGCCAAGGGTGCTaGCAGCCAGGGAGTAGTATG +
Preference number: 4 (lower is better)
Translates to: HRGKHQCDKQPEELVHGLRCQGC*QPGSSM
Trigger: CATACTACTCCCTGGCTGCCAGCACCCTTGGCACCT...CAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAAACACACTCTCCAGGCCATCTCCGTAAGCTTCATGGGTGGCAAGTCCAGCCAGCCCTCGGCTATGAGTaGAAACACACTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ETHSPGHLRKLHGWQVQPALGYE*KHTLQA
Trigger: GGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGC...TGGCTGGACTTGCCACCCATGAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CACAAACTCATTGATGCCAAACAGCACCACCTCCAGCAGGGCCATGAGCAGCAGGCCCTCGGCTATGAGTaGAAACACACTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HKLIDAKQHHLQQGHEQQALGYE*KHTLQA
Trigger: GGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGC...CTGCTGCTCATGGCCCTGCTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCCCTCGGCTATGAGTaGAAACACACTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TWGQWITWVPQFGLFYPCALGYE*KHTLQA
Trigger: GGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGC...ACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp AACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGGGACGTGGCACTGCGCTaGCCCTCGGCTATGAGTGGA +
Preference number: 4 (lower is better)
Translates to: NFLVAASQHLRKGACPLRDVALR*PSAMSG
Trigger: TCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTC...CCTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAGCATGGCCTGTGACGTaGCACTGCGCTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: EEWELKKNFLVAASQHLRAWPVT*HCAGPR
Trigger: CCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGC...TCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGCTCCCTTCTTGCAGCTaGAGGAATGGGAGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LLFSSWGLYRTRERTSPKLPSCS*RNGSSK
Trigger: TTTTGAGCTCCCATTCCTCCAGCTGCAAGAAGGGAG...CTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCTCCCTTCTTGCAGCTaGAGGAATGGGAGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPLPSCS*RNGSSK
Trigger: TTTTGAGCTCCCATTCCTCCAGCTGCAAGAAGGGAG...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAAACACACTCTCCAGGCCATCTCCGTAAGCTTCATGGGTGGCAAGTCCAGCCATTGCCCCTCTCCCTGTaGAGACGCTGCCTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ETHSPGHLRKLHGWQVQPLPLSL*RRCLWK
Trigger: TTTCCACAGGCAGCGTCTCCACAGGGAGAGGGGCAA...TGGCTGGACTTGCCACCCATGAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCTTGGGTGCCTCAATTTaGCCTCTTCTACCCATGTGC +
Preference number: 4 (lower is better)
Translates to: ELVPQRGDSPSQEASCQSLGASI*PLLPMC
Trigger: GCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAA...GCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GCATTGATCATGCTCTCCACGCCAACATGGATGTGGCCACCGTGGAAGGAGTGGACTTGTACCCCAGCGTaGAGACAGTCCCAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ALIMLSTPTWMWPPWKEWTCTPA*RQSQPR
Trigger: TCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGT...CCACTCCTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAGCATGATCAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGTGTAACTGTGTGACGTaGGGCCAGTGGATCACTTGG +
Preference number: 4 (lower is better)
Translates to: AWLGLHCNCVTWGQWITWCNCVT*GQWITW
Trigger: CCAAGTGATCCACTGGCCCCACGTCACACAGTTACA...CCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCCACAAAAGTCAGCATTaGTCATGCTCTCCACGCCAA +
Preference number: 4 (lower is better)
Translates to: VGHLVRFPLLYPVTAPLPHKSQH*SCSPRQ
Trigger: TTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTG...GGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CCCAGCCCCCAGCGCTGTGAGTGCAGCATTGAAGCTAGGCCAGAAGATCCACAGCACAAAAGTCAGCATTaGTCATGCTCTCCACGCCAA +
Preference number: 4 (lower is better)
Translates to: PSPQRCECSIEARPEDPQHKSQH*SCSPRQ
Trigger: TTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTG...CTGTGGATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGCGCTGGGGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp TCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTGGAGCACAAACTCATTaGTGCCAAACAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: SGWASGEVPPIVPSYGPTGAQTH*CQTAPP
Trigger: AGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCC...AGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CGCTGCATTTTGGATGTGGACCATGTCAAGCCTCCCATCTTCCCCTACAAGGGCTTCCCCTACAAGGGCTaGCAAGGCAAAGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RCILDVDHVKPPIFPYKGFPYKG*QGKGAK
Trigger: CTTGGCACCTTTGCCTTGTCAGCCCTTGTAGGGGAA...GCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGTTCACTGTAACTGTGTaGCGTGGGGCCAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: GPVDHLGASIWPLLPMCRFTVTV*RGASGS
Trigger: TGATCCACTGGCCCCACGTCACACAGTTACAGTGAA...CCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TTGCAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCCGCGTTACTGTGGTTaGTCCGGTGCCAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LQLEEWELKKNFLVAASQPRYCG*SGARGQ
Trigger: CTGCCCTCTGGCACCGGAGCAACCACAGTAACGCGG...CTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TTGAATTTTGATTCAAGGATGGGCGTGAAGAACTTGTACCCCAGCGTGGAGACATTGAGGGCCGTCCGATaGTGCCCAGCCCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LNFDSRMGVKNLYPSVETLRAVR*CPAPSA
Trigger: AGCGCTGGGGGCTGGGCAGCATCGGACGGCCCTCAA...TGTCTCCACGCTGGGGTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GCGTTTATCACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTCATGGCTCCCTTCTTaGAGCTGGAGGAATGGGAGC +
Preference number: 4 (lower is better)
Translates to: AFITLNQAWLGLHCNCVTSWLPS*SWRNGS
Trigger: GCTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGA...CGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGATAAACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTATCATGGCTCCCTTCTTaGAGCTGGAGGAATGGGAGC +
Preference number: 4 (lower is better)
Translates to: LCDVGPVDHLGASIWPLLSWLPS*SWRNGS
Trigger: GCTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGA...TAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp AACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGGTTCCCAGCCTCCTGTTaGCCCTCTCCCTGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: NFLVAASQHLRKGACPLRFPASC*PSPCGD
Trigger: GTCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAA...CCTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCAGTGGATCACTTGGGTaGCTCAATTTGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QSGWASGEVPPIVPSYGPSGSLG*LNLASS
Trigger: AGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACT...GGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCAGTGGATCACTTGGGTaGCTCAATTTGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GSRVGHLVRFPLLYPVTASGSLG*LNLASS
Trigger: AGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACT...GGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GAAACACACTCTCCAGGCCATCTCCGTAAGCTTCATGGGTGGCAAGTCCAGCCACCCTCCAGCCAGCGCTaGATTTTGGATGTGGACCAT +
Preference number: 4 (lower is better)
Translates to: ETHSPGHLRKLHGWQVQPPSSQR*ILDVDH
Trigger: ATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGG...TGGCTGGACTTGCCACCCATGAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAGCCATGAGCAGCAGCTaGGTAGGCCCGGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: EEWELKKNFLVAASQHLRAMSSS*VGPVLP
Trigger: GGGCAAGACCGGGCCTACCCAGCTGCTGCTCATGGC...TCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GCCCCCGCCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGAGATCCACAGGAAGATaGTCCCAATCATGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: APAHRGKHQCDKQPEELVRSTGR*SQSWRR
Trigger: TCTTCGCCATGATTGGGACCATCTTCCTGTGGATCT...CACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGCGTAAGCTTCATGGGTaGCAAGTCCAGCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: GPVDHLGASIWPLLPMCRRKLHG*QVQPQG
Trigger: TCCTTGTGGCTGGACTTGCCACCCATGAAGCTTACG...CCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGCTAAAGGGGCCTCCTTCTaGCTCATGGCTCCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ASGSLGCLNLASSTHVQAKGASF*LMAPFL
Trigger: CAAGAAGGGAGCCATGAGCCAGAAGGAGGCCCCTTT...AGCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CACAAACTCATTGATGCCAAACAGCACCACCTCCAGCAGGGCCATGAGCAGCAGAAAGGGGCCTCCTTCTaGCTCATGGCTCCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: HKLIDAKQHHLQQGHEQQKGASF*LMAPFL
Trigger: CAAGAAGGGAGCCATGAGCCAGAAGGAGGCCCCTTT...CTGCTGCTCATGGCCCTGCTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ATCCTCATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGATTGGGTGCCTCAATTTaGCCTCTTCTACCCATGTGC +
Preference number: 4 (lower is better)
Translates to: ILMLARHLPVNLVLVVLGLGASI*PLLPMC
Trigger: GCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAA...TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCATGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGCCAGCGCTGCATTTTaGATGTGGACCATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: GASGSLGCLNLASSTHVQASAAF*MWTMSS
Trigger: GCTTGACATGGTCCACATCCAAAATGCAGCGCTGGC...CTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGTGTAACTGTGTGACGTaGGGCCAGTGGATCACTTGG +
Preference number: 4 (lower is better)
Translates to: GPVDHLGASIWPLLPMCRCNCVT*GQWITW
Trigger: CCAAGTGATCCACTGGCCCCACGTCACACAGTTACA...CCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGCTGTAACTGTGTGACGTaGGGCCAGTGGATCACTTGG +
Preference number: 4 (lower is better)
Translates to: GQWITWVPQFGLFYPCAGCNCVT*GQWITW
Trigger: CCAAGTGATCCACTGGCCCCACGTCACACAGTTACA...GCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp AACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCCACAAAAGTCAGCATTaGTCATGCTCTCCACGCCAA +
Preference number: 4 (lower is better)
Translates to: NQAWLGLHCNCVTWGQWIHKSQH*SCSPRQ
Trigger: TTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTG...GATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCGGAGCACAAACTCATTaGTGCCAAACAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: PTEANISVTNSPKSWCMAGAQTH*CQTAPP
Trigger: AGGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCC...GGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGCACCAAAGGAGATGAGCACGGCCCCCGCACAAAAGTCAGCATTGATCATGCTCTCACCCCCAGGAGATaGAGGAGCACAAACTCATTG +
Preference number: 4 (lower is better)
Translates to: GTKGDEHGPRTKVSIDHALTPRR*RSTNSL
Trigger: CAATGAGTTTGTGCTCCTTCATCTCCTGGGGGTGAG...AGCATGATCAATGCTGACTTTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp TGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAAGCCCTGGCGGTGCTTaGTCTTCTCCAGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: WELKKNFLVAASQHLRKGSPGGA*SSPAGA
Trigger: GGCCCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCT...TCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTGAGCGAAACTCCATTTaGGTAGCGAAAGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: GACPLRGWQWVRPECLPPERNSI*VAKVKF
Trigger: GAATTTTACTTTCGCTACCCAAATGGAGTTTCGCTC...AGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACATGGCATGCACGTCCTaGAAGCCTGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CVTWGQWITWVPQFGLFYMACTS*KPVIPA
Trigger: AGCTGGGATTACAGGCTTCCAGGACGTGCATGCCAT...GTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GCGTTTATCACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGATGGCATGCACGTCCTaGAAGCCTGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AFITLNQAWLGLHCNCVTMACTS*KPVIPA
Trigger: AGCTGGGATTACAGGCTTCCAGGACGTGCATGCCAT...CGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGATAAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGCCACCGTGGAAGGAGTaGAGAAAGCCCTGGACCAGT +
Preference number: 4 (lower is better)
Translates to: ELPSSSQSASSKRSVSSQPPWKE*RKPWTS
Trigger: ACTGGTCCAGGGCTTTCTCCACTCCTTCCACGGTGG...CTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGTGGATGTGGCCACCGTaGAAGGAGTGGAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: ELPSSSQSASSKRSVSSQWMWPP*KEWRKP
Trigger: GGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCA...CTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAGGGGTCTAGGAGGCATAAGACCAATATGATGCCTCCAAGGCCCCCGCCCACAAGATGGTCCCAATCATaGCGAAGAGGTCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: QGSRRHKTNMMPPRPPPTRWSQS*RRGLNG
Trigger: ACCATTCAGACCTCTTCGCCATGATTGGGACCATCT...TGTGGGCGGGGGCCTTGGAGGCATCATATTGGTCTTATGCCTCCTAGACCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451864.6
CDS-3UTR CCA 90 bp GCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGAGATCCACAGGAAGATaGTCCCAATCATGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: AWLGLHCNCVTWGQWITWRSTGR*SQSWRR
Trigger: TCTTCGCCATGATTGGGACCATCTTCCTGTGGATCT...CCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GCGTTTATCACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGCGTAAGCTTCATGGGTaGCAAGTCCAGCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: AFITLNQAWLGLHCNCVTRKLHG*QVQPQG
Trigger: TCCTTGTGGCTGGACTTGCCACCCATGAAGCTTACG...CGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGATAAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TTGCAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCGAAGAGCTGGTGCATaGCCTGTGACGTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LQLEEWELKKNFLVAASQRRAGA*PVTWHC
Trigger: GCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCG...CTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTAACCCTCAGAGGTCTCTaGGCTTTATCCTCATGCTCG +
Preference number: 4 (lower is better)
Translates to: LCDVGPVDHLGASIWPLLTLRGL*ALSSCS
Trigger: CGAGCATGAGGATAAAGCCCAGAGACCTCTGAGGGT...TAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CGCTGCATTTTGGATGTGGACCATGTCAAGCCTCCCATCTTCCCCTACAAGGGCACCCTCAGAGGTCTCTaGGCTTTATCCTCATGCTCG +
Preference number: 4 (lower is better)
Translates to: RCILDVDHVKPPIFPYKGTLRGL*ALSSCS
Trigger: CGAGCATGAGGATAAAGCCCAGAGACCTCTGAGGGT...GCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGCTCCCTTCTTGCAGCTaGAGGAATGGGAGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: GASGSLGCLNLASSTHVQLPSCS*RNGSSK
Trigger: TTTTGAGCTCCCATTCCTCCAGCTGCAAGAAGGGAG...CTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGTTGGGTGCCTCAATTTaGCCTCTTCTACCCATGTGC +
Preference number: 4 (lower is better)
Translates to: GPVDHLGASIWPLLPMCRLGASI*PLLPMC
Trigger: GCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAA...CCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCTGGCCAGCGCTGCATTTTaGATGTGGACCATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: HRGKHQCDKQPEELVHGLASAAF*MWTMSS
Trigger: GCTTGACATGGTCCACATCCAAAATGCAGCGCTGGC...CAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGCACGTCCTGGAAGCCTaGGAGGTGAAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ELPSSSQSASSKRSVSSQHVLEA*EVKVAV
Trigger: CACTGCAACCTTCACCTCCCAGGCTTCCAGGACGTG...CTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612897.4
CDS-3UTR TCA 90 bp CTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCGTAAGCTTCCACAAAAGTCAGCATTaGTCATGCTCTCCACGCCAA +
Preference number: 4 (lower is better)
Translates to: LALGYEWKHTLQAISVSFHKSQH*SCSPRQ
Trigger: TTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTG...GAAGCTTACGGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAACGGCACCAAAGGAGATaGGCACGGCCCCCGCACAAA +
Preference number: 4 (lower is better)
Translates to: GMGAQKELPSSSQSASSKRHQRR*ARPPHK
Trigger: TTTGTGCGGGGGCCGTGCTCATCTCCTTTGGTGCCG...TTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp TTGCAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGGGGTTGGGCATCTGGTaGGGTTCCCCCTATTGTACC +
Preference number: 4 (lower is better)
Translates to: LQLEEWELKKNFLVAASQGLGIW*GSPYCT
Trigger: GGTACAATAGGGGGAACCTCACCAGATGCCCAACCC...CTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGCAGCATCATTTCACTTaGGGTCCCCACCACAACCCC +
Preference number: 4 (lower is better)
Translates to: ELPSSSQSASSKRSVSSQQHHFT*GPHHNP
Trigger: GGGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTG...CTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCCTCTTCTACCCATGTaGAGGCTGGTAGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: QLEEWELKKNFLVAASQHPLLPM*RLVGQS
Trigger: CGACTGCCCTACCAGCCTGCACATGGGTAGAAGAGG...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TTGCAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCCACCGTGGAAGGAGTaGAGAAAGCCCTGGACCAGT +
Preference number: 4 (lower is better)
Translates to: LQLEEWELKKNFLVAASQPPWKE*RKPWTS
Trigger: ACTGGTCCAGGGCTTTCTCCACTCCTTCCACGGTGG...CTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATTTGCTCTTCTCCAGCTaGGGCCTGTACAGAACCCGC +
Preference number: 4 (lower is better)
Translates to: QLEEWELKKNFLVAASQHLLFSS*GLYRTR
Trigger: GCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CCCACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCAGATGGTCCCAATCATaGCGAAGAGGTCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: PTEANISVTNSPKSWCMARWSQS*RRGLNG
Trigger: ACCATTCAGACCTCTTCGCCATGATTGGGACCATCT...GGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGAGCACGGCACTCCACATGTGTCTTaGACTTTGAATTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: QLGRPGLAQDGTKGDEHGTPHVS*TLNFDS
Trigger: TGAATCAAAATTCAAAGTCCAAGACACATGTGGAGT...GCCGTGCTCATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATGCCCTCGGCTATGAGTaGAAACACACTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QLEEWELKKNFLVAASQHALGYE*KHTLQA
Trigger: GGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGC...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATAACAGCCCGAAGAGCTaGTGCATGGCCTGTGACGTG +
Preference number: 4 (lower is better)
Translates to: QLEEWELKKNFLVAASQHNSPKS*CMACDV
Trigger: CACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTT...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTGTCCTCTCAGGGGCTaGCAGTGGGTTAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QKELPSSSQSASSKRSVSCPLRG*QWVRPE
Trigger: CTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACA...GGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CGCTGCATTTTGGATGTGGACCATGTCAAGCCTCCCATCTTCCCCTACAAGGGCCTCCCTTCTTGCAGCTaGAGGAATGGGAGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: RCILDVDHVKPPIFPYKGLPSCS*RNGSSK
Trigger: TTTTGAGCTCCCATTCCTCCAGCTGCAAGAAGGGAG...GCCCTTGTAGGGGAAGATGGGAGGCTTGACATGGTCCACATCCAAAATGCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTTGGAGACGCTGCCTGTaGAAAGGGGCCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LEEWELKKNFLVAASQHLWRRCL*KGASFW
Trigger: CCAGAAGGAGGCCCCTTTCCACAGGCAGCGTCTCCA...AAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGGGCCAGTGGATCACTTaGGTGCCTCAATTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ELPSSSQSASSKRSVSSQGQWIT*VPQFGL
Trigger: GAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCC...CTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TTGCAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGGTGACGTGGGGCCAGTaGATCACTTGGGTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: LQLEEWELKKNFLVAASQVTWGQ*ITWVPQ
Trigger: TTGAGGCACCCAAGTGATCCACTGGCCCCACGTCAC...CTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCTTGGACTTTGAATTTTaGTTCAAGGATGGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: GQSGWASGEVPPIVPSYGLDFEF*FKDGRE
Trigger: TTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAA...GCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp TTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTTGGACTTTGAATTTTaGTTCAAGGATGGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: LLFSSWGLYRTRERTSPKLDFEF*FKDGRE
Trigger: TTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAA...CTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCAAAGGTGCCAAGGGTaGTGGCAGCCAGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LEEWELKKNFLVAASQHLQRCQG*WQPGSS
Trigger: ACTACTCCCTGGCTGCCAGCACCCTTGGCACCTTTG...AAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp CTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTAGCCAAGAAGCCAGCTaGCAGAGCCCCAAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LEEWELKKNFLVAASQHLSQEAS*QSPKGC
Trigger: ACACCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCT...AAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCCGAGCGAAACTCCATTTaGGTAGCGAAAGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: VGHLVRFPLLYPVTAPLPERNSI*VAKVKF
Trigger: GAATTTTACTTTCGCTACCCAAATGGAGTTTCGCTC...GGGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGCACCAAAGGTGTGAGCGAAACTCCATTTaGGTAGCGAAAGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: GACTEPAKGRARSRHQRCERNSI*VAKVKF
Trigger: GAATTTTACTTTCGCTACCCAAATGGAGTTTCGCTC...ACACCTTTGGTGCCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAAGCCCTGGACCAGTGTaGACCACTGCAGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: WELKKNFLVAASQHLRKGSPGPV*TTAGQR
Trigger: CCTTTGCCCTGCAGTGGTCCACACTGGTCCAGGGCT...TCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCACGCCAACATGGATGTaGCCACCGTGGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: QKELPSSSQSASSKRSVSTPTWM*PPWKEW
Trigger: CCACTCCTTCCACGGTGGCCACATCCATGTTGGCGT...GGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGATTGCTCTTCTCCAGCTaGGGCCTGTACAGAACCCGC +
Preference number: 4 (lower is better)
Translates to: EEWELKKNFLVAASQHLRLLFSS*GLYRTR
Trigger: GCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA...TCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACAGATCCACAGGAAGATaGTCCCAATCATGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: CVTWGQWITWVPQFGLFYRSTGR*SQSWRR
Trigger: TCTTCGCCATGATTGGGACCATCTTCCTGTGGATCT...GTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GCGTTTATCACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGAGATCCACAGGAAGATaGTCCCAATCATGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: AFITLNQAWLGLHCNCVTRSTGR*SQSWRR
Trigger: TCTTCGCCATGATTGGGACCATCTTCCTGTGGATCT...CGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGATAAACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGACGAAGAGCTGGTGCATaGCCTGTGACGTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: WELKKNFLVAASQHLRKGRRAGA*PVTWHC
Trigger: GCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCG...TCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAACAGCCCGAAGAGCTaGTGCATGGCCTGTGACGTG +
Preference number: 4 (lower is better)
Translates to: EEWELKKNFLVAASQHLRNSPKS*CMACDV
Trigger: CACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTT...TCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp AACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGGACCCTCAGAGGTCTCTaGGCTTTATCCTCATGCTCG +
Preference number: 4 (lower is better)
Translates to: NFLVAASQHLRKGACPLRTLRGL*ALSSCS
Trigger: CGAGCATGAGGATAAAGCCCAGAGACCTCTGAGGGT...CCTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGACCCTCAGAGGTCTCTaGGCTTTATCCTCATGCTCG +
Preference number: 4 (lower is better)
Translates to: ELPSSSQSASSKRSVSSQTLRGL*ALSSCS
Trigger: CGAGCATGAGGATAAAGCCCAGAGACCTCTGAGGGT...CTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCCTCCTTCTGGCTCATaGCTCCCTTCTTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LEEWELKKNFLVAASQHLPPSGS*LPSCSW
Trigger: CCAGCTGCAAGAAGGGAGCCATGAGCCAGAAGGAGG...AAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TTGCAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGAAAGGGGCCTCCTTCTaGCTCATGGCTCCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LQLEEWELKKNFLVAASQKGASF*LMAPFL
Trigger: CAAGAAGGGAGCCATGAGCCAGAAGGAGGCCCCTTT...CTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGATGGAGACGCTGCCTGTaGAAAGGGGCCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WELKKNFLVAASQHLRKGWRRCL*KGASFW
Trigger: CCAGAAGGAGGCCCCTTTCCACAGGCAGCGTCTCCA...TCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGCCACGTCCTGGAAGCTTaGGTAGCGAAAGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: GQWITWVPQFGLFYPCAGHVLEA*VAKVKF
Trigger: GAATTTTACTTTCGCTACCCAAGCTTCCAGGACGTG...GCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537040.6
CDS-3UTR CCA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATACCCTCAACCAGGCCTaGCTTGGGCTTCACTGTAAC +
Preference number: 4 (lower is better)
Translates to: QLEEWELKKNFLVAASQHTLNQA*LGLHCN
Trigger: GTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGT...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAGCTGCAGGAAGACCATaGGGAAGCCAAAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: GMGAQKELPSSSQSASSKAAGRP*GSQSPR
Trigger: TCGTGGGCTTTGGCTTCCTCATGGTCTTCCTGCAGC...TTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAACCCCAGCGCTGTGAGTaGAGCATTGAAGCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GMGAQKELPSSSQSASSKPQRCE*SIEARP
Trigger: TGGCCTAGCTTCAATGCTGCACTCACAGCGCTGGGG...TTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAACTGACAAGGCAAAGGTaGCAAGGGTGCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GMGAQKELPSSSQSASSKLTRQR*QGCWQP
Trigger: TGGCTGCCAGCACCCTTGGCACCTTTGCCTTGTCAG...TTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGATCATGGCTCCCTTCTTaGAGCTGGAGGAATGGGAGC +
Preference number: 4 (lower is better)
Translates to: EEWELKKNFLVAASQHLRSWLPS*SWRNGS
Trigger: GCTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGA...TCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGACCCTCCAGCCAGCGCTaGATTTTGGATGTGGACCAT +
Preference number: 4 (lower is better)
Translates to: EEWELKKNFLVAASQHLRPSSQR*ILDVDH
Trigger: ATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGG...TCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAATTGTCCGCGTTACTGTaGTTGCTCCGGTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GMGAQKELPSSSQSASSKLSALL*LLRCQR
Trigger: CCTCTGGCACCGGAGCAACCACAGTAACGCGGACAA...TTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAACGCCAACATGGATGTaGCCACCGTGGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GMGAQKELPSSSQSASSKTPTWM*PPWKEW
Trigger: CCACTCCTTCCACGGTGGCCACATCCATGTTGGCGT...TTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TTGAATTTTGATTCAAGGATGGGCGTGAAGAACTTGTACCCCAGCGTGGAGACATTGCTCTTCTCCAGCTaGGGCCTGTACAGAACCCGC +
Preference number: 4 (lower is better)
Translates to: LNFDSRMGVKNLYPSVETLLFSS*GLYRTR
Trigger: GCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA...TGTCTCCACGCTGGGGTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCTCACCCCCAGGAGATaGAGGAGCACAAACTCATTG +
Preference number: 4 (lower is better)
Translates to: LEEWELKKNFLVAASQHLLTPRR*RSTNSL
Trigger: CAATGAGTTTGTGCTCCTTCATCTCCTGGGGGTGAG...AAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp CTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTTTCACTGTAACTGTGTaGCGTGGGGCCAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: LEEWELKKNFLVAASQHLFTVTV*RGASGS
Trigger: TGATCCACTGGCCCCACGTCACACAGTTACAGTGAA...AAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCACTCCACATGTGTCTTaGACTTTGAATTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: GQSGWASGEVPPIVPSYGTPHVS*TLNFDS
Trigger: TGAATCAAAATTCAAAGTCCAAGACACATGTGGAGT...GCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCACATGTGTCTTaGACTTTGAATTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: QSGWASGEVPPIVPSYGPTPHVS*TLNFDS
Trigger: TGAATCAAAATTCAAAGTCCAAGACACATGTGGAGT...GGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCCGTAAGCTTCATGGGTaGCAAGTCCAGCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: QKELPSSSQSASSKRSVSRKLHG*QVQPQG
Trigger: TCCTTGTGGCTGGACTTGCCACCCATGAAGCTTACG...GGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGACGTAAGCTTCATGGGTaGCAAGTCCAGCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: EEWELKKNFLVAASQHLRRKLHG*QVQPQG
Trigger: TCCTTGTGGCTGGACTTGCCACCCATGAAGCTTACG...TCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp ATCCTCATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGAAGAGTGAGACTCTTTTaGGTAGCGAAAGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: ILMLARHLPVNLVLVVLGRVRLF*VAKVKF
Trigger: GAATTTTACTTTCGCTACCCAAAAGAGTCTCACTCT...TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCATGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612897.4
CDS-3UTR CCA 90 bp GGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAGGCCAGTGGATCACTTaGGTGCCTCAATTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GMGAQKELPSSSQSASSKGQWIT*VPQFGL
Trigger: GAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCC...TTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATAGATGGTCCCAATCATaGCGAAGAGGTCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: QLEEWELKKNFLVAASQHRWSQS*RRGLNG
Trigger: ACCATTCAGACCTCTTCGCCATGATTGGGACCATCT...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp CAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCCTCCCTTCTTGCAGCTaGAGGAATGGGAGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: QKELPSSSQSASSKRSVSLPSCS*RNGSSK
Trigger: TTTTGAGCTCCCATTCCTCCAGCTGCAAGAAGGGAG...GGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCCAGCGCTGCATTTTaGATGTGGACCATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: WELKKNFLVAASQHLRKGASAAF*MWTMSS
Trigger: GCTTGACATGGTCCACATCCAAAATGCAGCGCTGGC...TCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGACTCCACATGTGTCTTaGACTTTGAATTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: GASGSLGCLNLASSTHVQTPHVS*TLNFDS
Trigger: TGAATCAAAATTCAAAGTCCAAGACACATGTGGAGT...CTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp GGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAATTGGGTGCCTCAATTTaGCCTCTTCTACCCATGTGC +
Preference number: 4 (lower is better)
Translates to: GMGAQKELPSSSQSASSKLGASI*PLLPMC
Trigger: GCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAA...TTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp TTGAATTTTGATTCAAGGATGGGCGTGAAGAACTTGTACCCCAGCGTGGAGACACACAAAAGTCAGCATTaGTCATGCTCTCCACGCCAA +
Preference number: 4 (lower is better)
Translates to: LNFDSRMGVKNLYPSVETHKSQH*SCSPRQ
Trigger: TTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTG...TGTCTCCACGCTGGGGTACAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGTTGGACTTTGAATTTTaGTTCAAGGATGGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: ELPSSSQSASSKRSVSSQLDFEF*FKDGRE
Trigger: TTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAA...CTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR GCA 90 bp GGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGTGGATCACTTGGGTaGCTCAATTTGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GMGAQKELPSSSQSASSKSGSLG*LNLASS
Trigger: AGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACT...TTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAAGATCCACAGGAAGATaGTCCCAATCATGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: WELKKNFLVAASQHLRKGRSTGR*SQSWRR
Trigger: TCTTCGCCATGATTGGGACCATCTTCCTGTGGATCT...TCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CCA 90 bp TGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACACTCCACATGTGTCTTaGACTTTGAATTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: CVTWGQWITWVPQFGLFYTPHVS*TLNFDS
Trigger: TGAATCAAAATTCAAAGTCCAAGACACATGTGGAGT...GTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
3UTR CAA 72 bp CCATGGAGGTTGTGGACTCCACATGTGTCTTGGACTTaGAATTTTGATTCAAGGATGGGCATGTCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: PWRLWTPHVSWT*NFDSRMGMSSL
Trigger: GAGGCTTGACATGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCACAACCTCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451864.6
CDS-3UTR TCA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATTTGGACTTTGAATTTTaGTTCAAGGATGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: QLEEWELKKNFLVAASQHLDFEF*FKDGHV
Trigger: GACATGCCCATCCTTGAATCAAAATTCAAAGTCCAA...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451864.6
3UTR CAA 72 bp CCATGGAGGTTGTGGACTCCACATGTGTCTTGGACTTaGAATTTTGATTCAAGGATGGGCGTGAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: PWRLWTPHVSWT*NFDSRMGVKNL
Trigger: CAAGTTCTTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAAGACACATGTGGAGTCCACAACCTCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR TCA 90 bp GGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAATTGGACTTTGAATTTTaGTTCAAGGATGGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: GMGAQKELPSSSQSASSKLDFEF*FKDGRE
Trigger: TTCACGCCCATCCTTGAATCAAAATTCAAAGTCCAA...TTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTTCCGCGTTACTGTGGTaGCTCCGGTGCCAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: SPKSWCMACDVALRWPSASALLW*LRCQRA
Trigger: TGCCCTCTGGCACCGGAGCAACCACAGTAACGCGGA...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS CCA 90 bp GATGCAGCCCGGGGCCAGGGCTGCTCATGGCACTGGAACTCACACTaGGGAACAGGAAGTGGCCAAGAGGGTCTCGAGGGTGCATGCCAG +
Preference number: 5 (lower is better)
Translates to: DAARGQGCSWHWNSH*GTGSGQEGLEGACQ
Trigger: CTGGCATGCACCCTCGAGACCCTCTTGGCCACTTCCTGTTCCCCAGTGTGAGTTCCAGTGCCATGAGCAGCCCTGGCCCCGGGCTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618120.4
ENST00000622297.1
CDS CCA 90 bp GGGAGAGAGAGGGATGCAGCCCGGGGCCAGGGCTGCTCATGGCACTaGAACTCACACTGGGGAACAGGAAGTGGCCAAGAGGGTCTCGAG +
Preference number: 5 (lower is better)
Translates to: GRERDAARGQGCSWH*NSHWGTGSGQEGLE
Trigger: CTCGAGACCCTCTTGGCCACTTCCTGTTCCCCAGTGTGAGTTCCAGTGCCATGAGCAGCCCTGGCCCCGGGCTGCATCCCTCTCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618120.4
ENST00000622297.1
CDS-3UTR CAA 90 bp GAACTTGTACCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCAGACCCGGCCATGGGTaGGGCTGCGATCTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: ELVPQRGDSPSQEASCQSRPGHG*GCDLGW
Trigger: CCAGCCGAGATCGCAGCCCAACCCATGGCCGGGTCT...GCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGGTACAAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612897.4
ENST00000613460.4
CDS-3UTR CAA 90 bp AAAGGAGCGTGTCCTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTAGACCCGGCCATGGGTaGGGCTGCGATCTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: KGACPLRGWQWVRPECLPRPGHG*GCDLGW
Trigger: CCAGCCGAGATCGCAGCCCAACCCATGGCCGGGTCT...AGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAGGACACGCTCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
CDS-3UTR CAA 90 bp CCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCCCCAAAGGGCACCTGCCAGTGAACTaGGTCCTCGTAGTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: PQRGDSPSQEASCQSPKGHLPVN*VLVVLG
Trigger: TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTG...CCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp ATGAGCAGCAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGTGCAGTGAGCCGAGATaGCGCCGTTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: MSSSWVGPVLPRTAPKEMCSEPR*RRCTPA
Trigger: GGCTGGAGTGCAACGGCGCAATCTCGGCTCACTGCA...CATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTGCTGCTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612897.4
CDS-3UTR CAA 90 bp AGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTTCAACCAGGCCTGGCTaGGGCTTCACTGTAACTGTG +
Preference number: 5 (lower is better)
Translates to: SPKSWCMACDVALRWPSASTRPG*GFTVTV
Trigger: CACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGA...AGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS TCA 90 bp GCTGGGAGTCTCCAAGGCCCCCGCCCACAGAGGCAAACATCAGTGTaGCAAACAGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCAC +
Preference number: 5 (lower is better)
Translates to: AGSLQGPRPQRQTSV*QTARRAGAWPVTWH
Trigger: GTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGCCTTGGAGACTCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494874.1
CDS TCA 90 bp CACAGGGGTCTCCAAGGCCCCCGCCCACAGAGGCAAACATCAGTGTaGCAAACAGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCAC +
Preference number: 5 (lower is better)
Translates to: HRGLQGPRPQRQTSV*QTARRAGAWPVTWH
Trigger: GTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGCCTTGGAGACCCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622297.1
CDS CCA 90 bp AACAGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTaGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: NSPKSWCMACDVALR*PSAMSGNTLSRLQG
Trigger: TCCCTGCAGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618120.4
ENST00000622297.1
CDS-3UTR CAA 90 bp CACAGGGCACAGGGGTCTAGGAGGCATAAGACCAATATGATGCCTCCAAGGCCCAGACCCGGCCATGGGTaGGGCTGCGATCTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: HRAQGSRRHKTNMMPPRPRPGHG*GCDLGW
Trigger: CCAGCCGAGATCGCAGCCCAACCCATGGCCGGGTCT...GGGCCTTGGAGGCATCATATTGGTCTTATGCCTCCTAGACCCCTGTGCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451864.6
CDS-3UTR CAA 90 bp CCCCAGCGTGGAGACAGTCCCAGCCAAGAAGCCAGCTGCCAGAGCCCCAAAGGGGGCATCCCATGGAGGTaGTGGACTCCACATGTGTCT +
Preference number: 5 (lower is better)
Translates to: PQRGDSPSQEASCQSPKGGIPWR*WTPHVS
Trigger: AGACACATGTGGAGTCCACAACCTCCATGGGATGCC...CCCTTTGGGGCTCTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp ACAAACAGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCCTCATGGCTCCCTTCTaGCAGCTGGAGGAATGGGAG +
Preference number: 5 (lower is better)
Translates to: TNSPKSWCMACDVALRWPLMAPF*QLEEWE
Trigger: CTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGAG...GGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CCCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGATTTCCCAGCCTCCTGTaGCCCCTCTCCCTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: PPGPPASHGGCGLHMCLGFPSLL*PLSLWR
Trigger: TCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAAA...TCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CTCTCAGGGGCTGGCAGTGGGTTAGGCCTGAGTGTCTGCCTCCTCCACCCTCAGGGGCCAGTGGATCACTaGGGTGCCTCAATTTGGCCT +
Preference number: 5 (lower is better)
Translates to: LSGAGSGLGLSVCLLHPQGPVDH*GASIWP
Trigger: AGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCC...CTGAGGGTGGAGGAGGCAGACACTCAGGCCTAACCCACTGCCAGCCCCTGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GGTGCTGGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCAGCGGGCCAGTGGATCACTaGGGTGCCTCAATTTGGCCT +
Preference number: 5 (lower is better)
Translates to: GAGSQGVVCVEGRPMLPSGPVDH*GASIWP
Trigger: AGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCC...GCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp ACAAACAGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCGGCATCCCATGGAGGTaGTGGACTCCACATGTGTCT +
Preference number: 5 (lower is better)
Translates to: TNSPKSWCMACDVALRWPGIPWR*WTPHVS
Trigger: AGACACATGTGGAGTCCACAACCTCCATGGGATGCC...GGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCCACCTGCCAGTGAACTaGGTCCTCGTAGTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: VLALLQLGPVQNPRKDEPHLPVN*VLVVLG
Trigger: TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTG...GGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCTCCAGGCCATCTCCCTCATGGCTCCCTTCTaGCAGCTGGAGGAATGGGAG +
Preference number: 5 (lower is better)
Translates to: GTALALGYEWKHTLQAISLMAPF*QLEEWE
Trigger: CTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGAG...GGAGATGGCCTGGAGAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCAGCCCCCAGCTTGGGTGCCTCAATTaGGCCTCTTCTACCCATGTG +
Preference number: 5 (lower is better)
Translates to: GSQGVVCVEGRPMLPSPQLGCLN*ASSTHV
Trigger: CACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAG...CTGGGGGCTGGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGTTTCCCAGCCTCCTGTaGCCCCTCTCCCTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: AWLGLHCNCVTWGQWITWFPSLL*PLSLWR
Trigger: TCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAAA...CCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CCCAGCCCCCAGCGCTGTGAGTGCAGCATTGAAGCTAGGCCAGAAGATCCACAGGTGAGGTTCCCCCTATaGTACCCAGTTACGGCCCCA +
Preference number: 5 (lower is better)
Translates to: PSPQRCECSIEARPEDPQVRFPL*YPVTAP
Trigger: TGGGGCCGTAACTGGGTACAATAGGGGGAACCTCAC...CTGTGGATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGCGCTGGGGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCGTGAGGTTCCCCCTATaGTACCCAGTTACGGCCCCA +
Preference number: 5 (lower is better)
Translates to: QSGWASGEVPPIVPSYGPVRFPL*YPVTAP
Trigger: TGGGGCCGTAACTGGGTACAATAGGGGGAACCTCAC...GGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp ACAAACAGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCCTTGGGTGCCTCAATTaGGCCTCTTCTACCCATGTG +
Preference number: 5 (lower is better)
Translates to: TNSPKSWCMACDVALRWPLGCLN*ASSTHV
Trigger: CACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAG...GGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CACAAACTCATTGATGCCAAACAGCACCACCTCCAGCAGGGCCATGAGCAGCAGGCCGAGATTGCGCCGTaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: HKLIDAKQHHLQQGHEQQAEIAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAACGGCGCAATCTCGGC...CTGCTGCTCATGGCCCTGCTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612897.4
CDS-3UTR CAA 90 bp GAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGAGACCCGGCCATGGGTaGGGCTGCGATCTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: ELPSSSQSASSKRSVSSQRPGHG*GCDLGW
Trigger: CCAGCCGAGATCGCAGCCCAACCCATGGCCGGGTCT...CTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
CDS-3UTR CAA 90 bp ACAAACAGCCCGAAGAGCTGGTGCATGGCCTGTGACGTGGCACTGCGCTGGCCCAGGAGCACAAACTCATaGATGCCAAACAGCACCACC +
Preference number: 5 (lower is better)
Translates to: TNSPKSWCMACDVALRWPRSTNS*MPNSTT
Trigger: GGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCT...GGGCCAGCGCAGTGCCACGTCACAGGCCATGCACCAGCTCTTCGGGCTGTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CAGGGGTCTAGGAGGCATAAGACCAATATGATGCCTCCAAGGCCCCCGCCCACACACCTGCCAGTGAACTaGGTCCTCGTAGTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: QGSRRHKTNMMPPRPPPTHLPVN*VLVVLG
Trigger: TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTG...TGTGGGCGGGGGCCTTGGAGGCATCATATTGGTCTTATGCCTCCTAGACCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451864.6
CDS-3UTR CAA 90 bp ATCCTCATGCTCGCCAGGCACCTGCCAGTGAACTTGGTCCTCGTAGTGCTGGGACTCATGGCTCCCTTCTaGCAGCTGGAGGAATGGGAG +
Preference number: 5 (lower is better)
Translates to: ILMLARHLPVNLVLVVLGLMAPF*QLEEWE
Trigger: CTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGAG...TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTGCCTGGCGAGCATGAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGAGGTTCCCCCTATaGTACCCAGTTACGGCCCCA +
Preference number: 5 (lower is better)
Translates to: AWLGLHCNCVTWGQWITWVRFPL*YPVTAP
Trigger: TGGGGCCGTAACTGGGTACAATAGGGGGAACCTCAC...CCAAGTGATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGACTCAGCATCATTTCACTaGAGGTCCCCACCACAACCC +
Preference number: 5 (lower is better)
Translates to: PQDPRHPMEVVDSTCVLDSASFH*RSPPQP
Trigger: GGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTGA...GTCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGGCACCAAAGGTATGGGCGTGAAGAACTaGTACCCCAGCGTGGAGACA +
Preference number: 5 (lower is better)
Translates to: LGPVQNPRKDEPEVGTKGMGVKN*YPSVET
Trigger: TGTCTCCACGCTGGGGTACAAGTTCTTCACGCCCAT...ACCTTTGGTGCCTACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CGGTGCTTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCGCACAAAAGTCAGCATaGATCATGCTCTCCACGCCA +
Preference number: 5 (lower is better)
Translates to: RCLLFSSWGLYRTRERTSAQKSA*IMLSTP
Trigger: TGGCGTGGAGAGCATGATCAATGCTGACTTTTGTGC...GCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAAGCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCGCTGTGAGTGCAGCATaGAAGCTAGGCCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: QSGWASGEVPPIVPSYGPAVSAA*KLGQKI
Trigger: GATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGC...GGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCGCTGTGAGTGCAGCATaGAAGCTAGGCCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: GSRVGHLVRFPLLYPVTAAVSAA*KLGQKI
Trigger: GATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGC...GGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCGCTGTGAGTGCAGCATaGAAGCTAGGCCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPAVSAA*KLGQKI
Trigger: GATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGC...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp TTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGGCTGTGAGTGCAGCATaGAAGCTAGGCCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: LLFSSWGLYRTRERTSPKAVSAA*KLGQKI
Trigger: GATCTTCTGGCCTAGCTTCAATGCTGCACTCACAGC...CTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp TCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTGGCATCCCATGGAGGTaGTGGACTCCACATGTGTCT +
Preference number: 5 (lower is better)
Translates to: SGWASGEVPPIVPSYGPTGIPWR*WTPHVS
Trigger: AGACACATGTGGAGTCCACAACCTCCATGGGATGCC...AGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp ATCACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCGGCATCCCATGGAGGTaGTGGACTCCACATGTGTCT +
Preference number: 5 (lower is better)
Translates to: ITLNQAWLGLHCNCVTWGGIPWR*WTPHVS
Trigger: AGACACATGTGGAGTCCACAACCTCCATGGGATGCC...GCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GATGAGCACGGCCCCCGCACAAAAGTCAGCATTGATCATGCTCTCCACGCCAACCTCATGGCTCCCTTCTaGCAGCTGGAGGAATGGGAG +
Preference number: 5 (lower is better)
Translates to: DEHGPRTKVSIDHALHANLMAPF*QLEEWE
Trigger: CTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGAG...GTTGGCGTGGAGAGCATGATCAATGCTGACTTTTGTGCGGGGGCCGTGCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp ACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTTTTCCCAGCCTCCTGTaGCCCCTCTCCCTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: TWGQWITWVPQFGLFYPCFPSLL*PLSLWR
Trigger: TCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAAA...ACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCCTTGGGTGCCTCAATTaGGCCTCTTCTACCCATGTG +
Preference number: 5 (lower is better)
Translates to: QSGWASGEVPPIVPSYGPLGCLN*ASSTHV
Trigger: CACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAG...GGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GGGCAGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCAGCCAGCGCTGCATTTaGGATGTGGACCATGTCAAG +
Preference number: 5 (lower is better)
Translates to: GQSGWASGEVPPIVPSYGSQRCI*DVDHVK
Trigger: CTTGACATGGTCCACATCCAAAATGCAGCGCTGGCT...GCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp TTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGAGCCAGCGCTGCATTTaGGATGTGGACCATGTCAAG +
Preference number: 5 (lower is better)
Translates to: LLFSSWGLYRTRERTSPKSQRCI*DVDHVK
Trigger: CTTGACATGGTCCACATCCAAAATGCAGCGCTGGCT...CTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp AGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCAATGGGCGTGAAGAACTaGTACCCCAGCGTGGAGACA +
Preference number: 5 (lower is better)
Translates to: SRVGHLVRFPLLYPVTAPMGVKN*YPSVET
Trigger: TGTCTCCACGCTGGGGTACAAGTTCTTCACGCCCAT...TGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTCCCGCACAAAAGTCAGCATaGATCATGCTCTCCACGCCA +
Preference number: 5 (lower is better)
Translates to: GWASGEVPPIVPSYGPTPAQKSA*IMLSTP
Trigger: TGGCGTGGAGAGCATGATCAATGCTGACTTTTGTGC...GGGAGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGTAGCACAAAAGTCAGCATaGATCATGCTCTCCACGCCA +
Preference number: 5 (lower is better)
Translates to: ALLQLGPVQNPRKDEPEVAQKSA*IMLSTP
Trigger: TGGCGTGGAGAGCATGATCAATGCTGACTTTTGTGC...TACTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp TTGCTCTTCTCCAGCTGGGGCCTGTACAGAACCCGCGAAAGGACGAGCCCGAAGAGGAGCACAAACTCATaGATGCCAAACAGCACCACC +
Preference number: 5 (lower is better)
Translates to: LLFSSWGLYRTRERTSPKRSTNS*MPNSTT
Trigger: GGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCT...CTTCGGGCTCGTCCTTTCGCGGGTTCTGTACAGGCCCCAGCTGGAGAAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GCGTTTATCACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGCACCTGCCAGTGAACTaGGTCCTCGTAGTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: AFITLNQAWLGLHCNCVTHLPVN*VLVVLG
Trigger: TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTG...CGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGATAAACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CACAGAGGCAAACATCAGTGTGACAAACAGCCCGAAGAGCTGGTGCATGGCCTGGTGAGGTTCCCCCTATaGTACCCAGTTACGGCCCCA +
Preference number: 5 (lower is better)
Translates to: HRGKHQCDKQPEELVHGLVRFPL*YPVTAP
Trigger: TGGGGCCGTAACTGGGTACAATAGGGGGAACCTCAC...CAGGCCATGCACCAGCTCTTCGGGCTGTTTGTCACACTGATGTTTGCCTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGCTGTGAGGTTCCCCCTATaGTACCCAGTTACGGCCCCA +
Preference number: 5 (lower is better)
Translates to: ASGSLGCLNLASSTHVQAVRFPL*YPVTAP
Trigger: TGGGGCCGTAACTGGGTACAATAGGGGGAACCTCAC...AGCCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp AACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCAGCCAGCGCTGCATTTaGGATGTGGACCATGTCAAG +
Preference number: 5 (lower is better)
Translates to: NQAWLGLHCNCVTWGQWISQRCI*DVDHVK
Trigger: CTTGACATGGTCCACATCCAAAATGCAGCGCTGGCT...GATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp ACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGGGCCAGTGGATCACTaGGGTGCCTCAATTTGGCCT +
Preference number: 5 (lower is better)
Translates to: TWGQWITWVPQFGLFYPCGPVDH*GASIWP
Trigger: AGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCC...ACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTGCAGGTCAACCAGGCCTGGCTaGGGCTTCACTGTAACTGTG +
Preference number: 5 (lower is better)
Translates to: GPVDHLGASIWPLLPMCRSTRPG*GFTVTV
Trigger: CACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGA...CCTGCACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp TCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCACTGCACAAAAGTCAGCATaGATCATGCTCTCCACGCCA +
Preference number: 5 (lower is better)
Translates to: SGWASGEVPPIVPSYGPTAQKSA*IMLSTP
Trigger: TGGCGTGGAGAGCATGATCAATGCTGACTTTTGTGC...AGTGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp AGTCGGGTTGGGCATCTGGTGAGGTTCCCCCTATTGTACCCAGTTACGGCCCCAAGGAGCACAAACTCATaGATGCCAAACAGCACCACC +
Preference number: 5 (lower is better)
Translates to: SRVGHLVRFPLLYPVTAPRSTNS*MPNSTT
Trigger: GGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCT...TGGGGCCGTAACTGGGTACAATAGGGGGAACCTCACCAGATGCCCAACCCGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CCACCACAACCCCTCCAGCCAGCGCTGCATTTTGGATGTGGACCATGTCAAGCCAGGAGCACAAACTCATaGATGCCAAACAGCACCACC +
Preference number: 5 (lower is better)
Translates to: PPQPLQPALHFGCGPCQARSTNS*MPNSTT
Trigger: GGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCT...GGCTTGACATGGTCCACATCCAAAATGCAGCGCTGGCTGGAGGGGTTGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGTTTCCCAGCCTCCTGTaGCCCCTCTCCCTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: ELPSSSQSASSKRSVSSQFPSLL*PLSLWR
Trigger: TCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAAA...CTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CAGCTGGGTAGGCCCGGTCTTGCCCAGGACGGCACCAAAGGAGATGAGCACGGCCATGTGTCTTGGACTTaGAATTTTGATTCAAGGATG +
Preference number: 5 (lower is better)
Translates to: QLGRPGLAQDGTKGDEHGHVSWT*NFDSRM
Trigger: CATCCTTGAATCAAAATTCAAAGTCCAAGACACATG...GCCGTGCTCATCTCCTTTGGTGCCGTCCTGGGCAAGACCGGGCCTACCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGCACCTGCCAGTGAACTaGGTCCTCGTAGTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: ELPSSSQSASSKRSVSSQHLPVN*VLVVLG
Trigger: TCCCAGCACTACGAGGACCAAGTTCACTGGCAGGTG...CTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp ACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTCTTGGGTGCCTCAATTaGGCCTCTTCTACCCATGTG +
Preference number: 5 (lower is better)
Translates to: TWGQWITWVPQFGLFYPCLGCLN*ASSTHV
Trigger: CACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAG...ACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CACAAACTCATTGATGCCAAACAGCACCACCTCCAGCAGGGCCATGAGCAGCAGAGCCAGCGCTGCATTTaGGATGTGGACCATGTCAAG +
Preference number: 5 (lower is better)
Translates to: HKLIDAKQHHLQQGHEQQSQRCI*DVDHVK
Trigger: CTTGACATGGTCCACATCCAAAATGCAGCGCTGGCT...CTGCTGCTCATGGCCCTGCTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp ACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTTCTACCCATGTTCAGCATCATTTCACTaGAGGTCCCCACCACAACCC +
Preference number: 5 (lower is better)
Translates to: TWGQWITWVPQFGLFYPCSASFH*RSPPQP
Trigger: GGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTGA...ACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp TGTAACTGTGTGACGTGGGGCCAGTGGATCACTTGGGTGCCTCAATTTGGCCTCTCAGCATCATTTCACTaGAGGTCCCCACCACAACCC +
Preference number: 5 (lower is better)
Translates to: CNCVTWGQWITWVPQFGLSASFH*RSPPQP
Trigger: GGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTGA...GAGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCCCACGTCACACAGTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCTCAGGGGCCAGTGGATCACTaGGGTGCCTCAATTTGGCCT +
Preference number: 5 (lower is better)
Translates to: ELPSSSQSASSKRSVSSQGPVDH*GASIWP
Trigger: AGGCCAAATTGAGGCACCCAAGTGATCCACTGGCCC...CTGAGAGGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS GCA 90 bp AGCTTGGGTAGCGAAAGTAAAATTCATTGTCCGCGTTACTGTGGTTaGTCCGGTGCCAGAGGGCAGCGTCGGTTTTGTGGTTGTAGCGGA +
Preference number: 5 (lower is better)
Translates to: SLGSESKIHCPRYCG*SGARGQRRFCGCSG
Trigger: TCCGCTACAACCACAAAACCGACGCTGCCCTCTGGCACCGGAGCAACCACAGTAACGCGGACAATGAATTTTACTTTCGCTACCCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537040.6
CDS-3UTR CAA 90 bp CCCCCAGGACCCCCGGCATCCCATGGAGGTTGTGGACTCCACATGTGTCTTGGAAGAGCGAAACTCCATTaGGGTAGCGAAAGTAAAATT +
Preference number: 5 (lower is better)
Translates to: PPGPPASHGGCGLHMCLGRAKLH*GSESKI
Trigger: AATTTTACTTTCGCTACCCAAATGGAGTTTCGCTCT...TCCAAGACACATGTGGAGTCCACAACCTCCATGGGATGCCGGGGGTCCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CACAAACTCATTGATGCCAAACAGCACCACCTCCAGCAGGGCCATGAGCAGCAGGCACAAAAGTCAGCATaGATCATGCTCTCCACGCCA +
Preference number: 5 (lower is better)
Translates to: HKLIDAKQHHLQQGHEQQAQKSA*IMLSTP
Trigger: TGGCGTGGAGAGCATGATCAATGCTGACTTTTGTGC...CTGCTGCTCATGGCCCTGCTGGAGGTGGTGCTGTTTGGCATCAATGAGTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp TTGCAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCTCATGGCTCCCTTCTaGCAGCTGGAGGAATGGGAG +
Preference number: 5 (lower is better)
Translates to: LQLEEWELKKNFLVAASQLMAPF*QLEEWE
Trigger: CTCCCATTCCTCCAGCTGCAAGAAGGGAGCCATGAG...CTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGATTTCCCAGCCTCCTGTaGCCCCTCTCCCTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: EEWELKKNFLVAASQHLRFPSLL*PLSLWR
Trigger: TCTCCACAGGGAGAGGGGCAACAGGAGGCTGGGAAA...TCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS GCA 90 bp CATTTGGGTAGCGAAAGTAAAATTCATTGTCCGCGTTACTGTGGTTaGTCCGGTGCCAGAGGGCAGCGTCGGTTTTGTGGTTGTAGCGGA +
Preference number: 5 (lower is better)
Translates to: HLGSESKIHCPRYCG*SGARGQRRFCGCSG
Trigger: TCCGCTACAACCACAAAACCGACGCTGCCCTCTGGCACCGGAGCAACCACAGTAACGCGGACAATGAATTTTACTTTCGCTACCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000618120.4
ENST00000620376.4
CDS-3UTR CAA 90 bp ATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCAGAGCGAAACTCCATTaGGGTAGCGAAAGTAAAATT +
Preference number: 5 (lower is better)
Translates to: MACDVALRWPSAMSGNTLRAKLH*GSESKI
Trigger: AATTTTACTTTCGCTACCCAAATGGAGTTTCGCTCT...GAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451864.6
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp AAGGGTGCTGGCAGCCAGGGAGTAGTATGTGTTGAGGGCCGTCCGATGCTGCCCCATGTGTCTTGGACTTaGAATTTTGATTCAAGGATG +
Preference number: 5 (lower is better)
Translates to: KGAGSQGVVCVEGRPMLPHVSWT*NFDSRM
Trigger: CATCCTTGAATCAAAATTCAAAGTCCAAGACACATG...GGGCAGCATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000451864.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp ATGGCCTGTGACGTGGCACTGCGCTGGCCCTCGGCTATGAGTGGAAACACACTCCAGAGTGAGACTCTTTaGGGTAGCGAAAGTAAAATT +
Preference number: 5 (lower is better)
Translates to: MACDVALRWPSAMSGNTLQSETL*GSESKI
Trigger: AATTTTACTTTCGCTACCCAAAAGAGTCTCACTCTG...GAGTGTGTTTCCACTCATAGCCGAGGGCCAGCGCAGTGCCACGTCACAGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612897.4
CDS-3UTR CAA 90 bp TTGCAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGATGGGCGTGAAGAACTaGTACCCCAGCGTGGAGACA +
Preference number: 5 (lower is better)
Translates to: LQLEEWELKKNFLVAASQMGVKN*YPSVET
Trigger: TGTCTCCACGCTGGGGTACAAGTTCTTCACGCCCAT...CTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCTCAACCAGGCCTGGCTaGGGCTTCACTGTAACTGTG +
Preference number: 5 (lower is better)
Translates to: QKELPSSSQSASSKRSVSSTRPG*GFTVTV
Trigger: CACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGA...GGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATAGGAGCACAAACTCATaGATGCCAAACAGCACCACC +
Preference number: 5 (lower is better)
Translates to: QLEEWELKKNFLVAASQHRSTNS*MPNSTT
Trigger: GGTGGTGCTGTTTGGCATCAATGAGTTTGTGCTCCT...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp ATCACCCTCAACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCATGTGTCTTGGACTTaGAATTTTGATTCAAGGATG +
Preference number: 5 (lower is better)
Translates to: ITLNQAWLGLHCNCVTWGHVSWT*NFDSRM
Trigger: CATCCTTGAATCAAAATTCAAAGTCCAAGACACATG...GCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGAGGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp AACCAGGCCTGGCTTGGGCTTCACTGTAACTGTGTGACGTGGGGCCAGTGGATCCATGTGTCTTGGACTTaGAATTTTGATTCAAGGATG +
Preference number: 5 (lower is better)
Translates to: NQAWLGLHCNCVTWGQWIHVSWT*NFDSRM
Trigger: CATCCTTGAATCAAAATTCAAAGTCCAAGACACATG...GATCCACTGGCCCCACGTCACACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAGGCATCCCATGGAGGTaGTGGACTCCACATGTGTCT +
Preference number: 5 (lower is better)
Translates to: GMGAQKELPSSSQSASSKGIPWR*WTPHVS
Trigger: AGACACATGTGGAGTCCACAACCTCCATGGGATGCC...TTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGATCAGCATCATTTCACTaGAGGTCCCCACCACAACCC +
Preference number: 5 (lower is better)
Translates to: EEWELKKNFLVAASQHLRSASFH*RSPPQP
Trigger: GGGTTGTGGTGGGGACCTCAAGTGAAATGATGCTGA...TCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp TGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGATCAACCAGGCCTGGCTaGGGCTTCACTGTAACTGTG +
Preference number: 5 (lower is better)
Translates to: WELKKNFLVAASQHLRKGSTRPG*GFTVTV
Trigger: CACAGTTACAGTGAAGCCCAAGCCAGGCCTGGTTGA...TCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp GGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAACTTGGGTGCCTCAATTaGGCCTCTTCTACCCATGTG +
Preference number: 5 (lower is better)
Translates to: GMGAQKELPSSSQSASSKLGCLN*ASSTHV
Trigger: CACATGGGTAGAAGAGGCCAAATTGAGGCACCCAAG...TTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS-3UTR CAA 90 bp CAGCTGGAGGAATGGGAGCTCAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATGCACGTCCTGGAAGCTaGGGTAGCGAAAGTAAAATT +
Preference number: 5 (lower is better)
Translates to: QLEEWELKKNFLVAASQHARPGS*GSESKI
Trigger: AATTTTACTTTCGCTACCCAAGCTTCCAGGACGTGC...ATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTGAGCTCCCATTCCTCCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537040.6
CDS CCA 90 bp CATGACCTTCTGCTGCACTTGATAGAGGACCAGGAAGGCAGTTTCTaGGTTGGTTTTGTTAACTCCAATTTCCTTTGCTCCCAGAATATG +
Preference number: 5 (lower is better)
Translates to: HDLLLHLIEDQEGSF*VGFVNSNFLCSQNM
Trigger: CATATTCTGGGAGCAAAGGAAATTGGAGTTAACAAAACCAACCCAGAAACTGCCTTCCTGGTCCTCTATCAAGTGCAGCAGAAGGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618120.4
CDS-3UTR CAA 90 bp CAAAAAGAACTTCCTAGTAGCAGCCAGTCAGCATCTTCGAAAAGGAGCGTGTCCCATGTGTCTTGGACTTaGAATTTTGATTCAAGGATG +
Preference number: 5 (lower is better)
Translates to: QKELPSSSQSASSKRSVSHVSWT*NFDSRM
Trigger: CATCCTTGAATCAAAATTCAAAGTCCAAGACACATG...GGACACGCTCCTTTTCGAAGATGCTGACTGGCTGCTACTAGGAAGTTCTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000451864.6
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000620376.4
CDS CAA 72 bp CCGGCCCGCGGCGCGGCTAGGAGACCCGGCCATGGGTaGGGCTGCGATCTCGGCTGGCGCTCGCAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: PARGAARRPGHG*GCDLGWRSQAL
Trigger: CAAAGCCTGCGAGCGCCAGCCGAGATCGCAGCCCAACCCATGGCCGGGTCTCCTAGCCGCGCCGCGGGCCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537040.6
CDS CCA 72 bp GGGAGGAAACTCACCCATCTCCGTAAGCTTCATGGGTaGCAAGTCCAGCCACAAGGACCCCCAGGAGGGCCC +
Preference number: 6 (lower is better)
Translates to: GRKLTHLRKLHG*QVQPQGPPGGP
Trigger: GGGCCCTCCTGGGGGTCCTTGTGGCTGGACTTGCCACCCATGAAGCTTACGGAGATGGGTGAGTTTCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618120.4
CDS CCA 72 bp TATCCTTCTTTTCTAGCCAGGGCTGTGGATGAAATATaGGGAGGGAGGAGCTGTAGCCCCTTCTGCCTAGGG +
Preference number: 6 (lower is better)
Translates to: YPSFLARAVDEI*GGRSCSPFCLG
Trigger: CCCTAGGCAGAAGGGGCTACAGCTCCTCCCTCCCCATATTTCATCCACAGCCCTGGCTAGAAAAGAAGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467375.2
CDS GCA 72 bp AGCGAAAGTAAAATTCATTGTCCGCGTTACTGTGGTTaGTCCGGTGCCAGAGGGCAGCGTCGGTTTTGTGGT +
Preference number: 6 (lower is better)
Translates to: SESKIHCPRYCG*SGARGQRRFCG
Trigger: ACCACAAAACCGACGCTGCCCTCTGGCACCGGAGCAACCACAGTAACGCGGACAATGAATTTTACTTTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000451864.6
ENST00000467375.2
ENST00000537040.6
ENST00000612897.4
ENST00000613460.4
ENST00000618120.4
ENST00000620376.4
CDS CCA 72 bp CAGACCCTTACGCAACAGCTTAGTTCTGTCAGACTCTaGACTGTTCCCTCCCAACTCTCTATCCTTCTTTTC +
Preference number: 6 (lower is better)
Translates to: QTLTQQLSSVRL*TVPSQLSILLF
Trigger: GAAAAGAAGGATAGAGAGTTGGGAGGGAACAGTCCAGAGTCTGACAGAACTAAGCTGTTGCGTAAGGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467375.2
CDS CAA 90 bp CACCCAAGTCCAAGTTTCCACCTCACTCTCTATATCCTTAGCATTTaGAGCTTCATTTTGTTGGGTCTAGAACAGGGTGAGGTGGGGATA +
Preference number: 6 (lower is better)
Translates to: HPSPSFHLTLYILSI*SFILLGLEQGEVGI
Trigger: TATCCCCACCTCACCCTGTTCTAGACCCAACAAAATGAAGCTCAAAATGCTAAGGATATAGAGAGTGAGGTGGAAACTTGGACTTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467375.2
CDS CAA 72 bp CTCACTCTCTATATCCTTAGCATTTTGAGCTTCATTTaGTTGGGTCTAGAACAGGGTGAGGTGGGGATAGCC +
Preference number: 6 (lower is better)
Translates to: LTLYILSILSFI*LGLEQGEVGIA
Trigger: GGCTATCCCCACCTCACCCTGTTCTAGACCCAACAAAATGAAGCTCAAAATGCTAAGGATATAGAGAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467375.2
CDS CAA 72 bp CCAAGTTTCCACCTCACTCTCTATATCCTTAGCATTTaGAGCTTCATTTTGTTGGGTCTAGAACAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: PSFHLTLYILSI*SFILLGLEQGE
Trigger: CTCACCCTGTTCTAGACCCAACAAAATGAAGCTCAAAATGCTAAGGATATAGAGAGTGAGGTGGAAACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467375.2
CDS TCA 72 bp TTAAGACTCCATTTGCGGGTTGCTTTTGCCCACCCTTaGTGTGCAAAAATAGATCCTAAAGGTCATTATCTC +
Preference number: 6 (lower is better)
Translates to: LRLHLRVAFAHP*CAKIDPKGHYL
Trigger: GAGATAATGACCTTTAGGATCTATTTTTGCACATCAAGGGTGGGCAAAAGCAACCCGCAAATGGAGTCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618120.4
ENST00000622297.1