RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RHBDL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000141314

Ensembl transcript IDs: ENST00000269051.9, ENST00000431505.6, ENST00000536287.2, ENST00000538145.5, ENST00000578006.5, ENST00000582967.1

Found 616 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGTGATGCCCACGGCCACGCCACCCAAGTGCGCCACAAAGCTTaGGTGAGGGCACGGGGGATAGGCCGACGGGTGGAAGCGGAGCCA +
Preference number: 1 (lower is better)
Translates to: QGDAHGHATQVRHKA*VRARGIGRRVEAEP
Trigger: TGGCTCCGCTTCCACCCGTCGGCCTATCCCCCGTGCCCTCACCCAAGCTTTGTGGCGCACTTGGGTGGCGTGGCCGTGGGCATCACCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR TCA 90 bp CCTGGAGCCTCTGCTCGTAGTTCCTCAGGACCACCACGCCCAGGGTaGTGCCCACGGCCACGCCACCCAAGTGCGCCACAAAGCTTGGGT +
Preference number: 1 (lower is better)
Translates to: PGASARSSSGPPRPG*CPRPRHPSAPQSLG
Trigger: ACCCAAGCTTTGTGGCGCACTTGGGTGGCGTGGCCGTGGGCATCACCCTGGGCGTGGTGGTCCTGAGGAACTACGAGCAGAGGCTCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR GCA 90 bp GGCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTaGACACCAACCAGCCCAGGAGGGCACCCTGGTTTCAGCCAGGTC +
Preference number: 1 (lower is better)
Translates to: GSLLCPTQAQQIMPR*TPTSPGGHPGFSQV
Trigger: GACCTGGCTGAAACCAGGGTGCCCTCCTGGGCTGGTTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 90 bp CAACCACAGCACACCACGGTCTGCCACCTCTCACGGATGCCCACATaGGCCCCCTGCATCCTCCATGCCTTCTCTGCAGGCGCTGTCGTG +
Preference number: 1 (lower is better)
Translates to: QPQHTTVCHLSRMPT*APCILHAFSAGAVV
Trigger: CACGACAGCGCCTGCAGAGAAGGCATGGAGGATGCAGGGGGCCCATGTGGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTGTGGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 90 bp GCCAAAGGCGTGGGCCCACAGTGCCACAGGCTGCGGCCCTCAGCATaGCACTGGTGCAGGGGAGCAGGACCTAGGGAACTACATATGTGG +
Preference number: 1 (lower is better)
Translates to: AKGVGPQCHRLRPSA*HWCRGAGPRELHMW
Trigger: CCACATATGTAGTTCCCTAGGTCCTGCTCCCCTGCACCAGTGCCATGCTGAGGGCCGCAGCCTGTGGCACTGTGGGCCCACGCCTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR TCA 90 bp GATGGGAAGCCACTGTGGCCCAAGACCCCAAATGCCTGGCCTGACTaGCCCTGGACCCTGCTACACTCAAGGGCCAGGATGGGCACCAGG +
Preference number: 1 (lower is better)
Translates to: DGKPLWPKTPNAWPD*PWTLLHSRARMGTR
Trigger: CCTGGTGCCCATCCTGGCCCTTGAGTGTAGCAGGGTCCAGGGTCAGTCAGGCCAGGCATTTGGGGTCTTGGGCCACAGTGGCTTCCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR TCA 90 bp CCAGGATGGGAAGCCACTGTGGCCCAAGACCCCAAATGCCTGGCCTaGCTGACCCTGGACCCTGCTACACTCAAGGGCCAGGATGGGCAC +
Preference number: 1 (lower is better)
Translates to: PGWEATVAQDPKCLA*LTLDPATLKGQDGH
Trigger: GTGCCCATCCTGGCCCTTGAGTGTAGCAGGGTCCAGGGTCAGTCAGGCCAGGCATTTGGGGTCTTGGGCCACAGTGGCTTCCCATCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 90 bp AGCCTACAGGCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATaGCCCGGTGCACACCAACCAGCCCAGGAGGGCACCCTGGTTTCA +
Preference number: 1 (lower is better)
Translates to: SLQAPCSAQPRHNRS*PGAHQPAQEGTLVS
Trigger: TGAAACCAGGGTGCCCTCCTGGGCTGGTTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGCCTGTAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 90 bp CACACCACGGTCTGCCACCTCTCACGGATGCCCACATGGGCCCCCTaGATCCTCCATGCCTTCTCTGCAGGCGCTGTCGTGCCTCAGTTA +
Preference number: 1 (lower is better)
Translates to: HTTVCHLSRMPTWAP*ILHAFSAGAVVPQL
Trigger: TAACTGAGGCACGACAGCGCCTGCAGAGAAGGCATGGAGGATGCAGGGGGCCCATGTGGGCATCCGTGAGAGGTGGCAGACCGTGGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 90 bp AGCAGGGCCTTGCTGCTTAGCCTGCGGTTGCCCTGCAGGATGGCTTaGCGGAAGCTGTTGGAACGCTTGTTGCTCATCAGGCACAGGGAG +
Preference number: 1 (lower is better)
Translates to: SRALLLSLRLPCRMA*RKLLERLLLIRHRE
Trigger: CTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCAGCAAGGCCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR CCA 90 bp ATGGGCAGAGACGAGAGCATACACCCCTCCAGAAGAGCCCACGACTaGAGCGGTCATGTCAGCCACAGACACTGCCAAGGACCCTGCCAC +
Preference number: 1 (lower is better)
Translates to: MGRDESIHPSRRAHD*SGHVSHRHCQGPCH
Trigger: GTGGCAGGGTCCTTGGCAGTGTCTGTGGCTGACATGACCGCTCCAGTCGTGGGCTCTTCTGGAGGGGTGTATGCTCTCGTCTCTGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR TCA 90 bp GGGCCAAGATGCGGTATGGCTGGGCCTCGCCTGCCAGTGAGTGAGTaGGCCCATTTACATGTAGTCACCAGGATGGGAAGCCACTGTGGC +
Preference number: 1 (lower is better)
Translates to: GPRCGMAGPRLPVSE*AHLHVVTRMGSHCG
Trigger: GCCACAGTGGCTTCCCATCCTGGTGACTACATGTAAATGGGCTCACTCACTCACTGGCAGGCGAGGCCCAGCCATACCGCATCTTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 90 bp TGCTTAGCCTGCGGTTGCCCTGCAGGATGGCTTGGCGGAAGCTGTTaGAACGCTTGTTGCTCATCAGGCACAGGGAGGGATACGGTGGTG +
Preference number: 1 (lower is better)
Translates to: CLACGCPAGWLGGSC*NACCSSGTGRDTVV
Trigger: CACCACCGTATCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR TCA 90 bp ATTACAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTaGGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTG +
Preference number: 1 (lower is better)
Translates to: ITVAQSLLSLSARPS*AGDEKKPRRRSLWV
Trigger: CACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTGTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
3UTR TCA 90 bp CAGTGGGCCAAGATGCGGTATGGCTGGGCCTCGCCTGCCAGTGAGTaGGTGAGCCCATTTACATGTAGTCACCAGGATGGGAAGCCACTG +
Preference number: 1 (lower is better)
Translates to: QWAKMRYGWASPASE*VSPFTCSHQDGKPL
Trigger: CAGTGGCTTCCCATCCTGGTGACTACATGTAAATGGGCTCACTCACTCACTGGCAGGCGAGGCCCAGCCATACCGCATCTTGGCCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 90 bp CTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCTaGCACCTCTCACGGATGCCCACATGGGCCCCCTGCATCCTCCAT +
Preference number: 1 (lower is better)
Translates to: LCQSKDIQQPQHTTV*HLSRMPTWAPCILH
Trigger: ATGGAGGATGCAGGGGGCCCATGTGGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 90 bp GGTTGCCCTGCAGGATGGCTTGGCGGAAGCTGTTGGAACGCTTGTTaGTCATCAGGCACAGGGAGGGATACGGTGGTGCTCAAGACAGAT +
Preference number: 1 (lower is better)
Translates to: GCPAGWLGGSCWNAC*SSGTGRDTVVLKTD
Trigger: ATCTGTCTTGAGCACCACCGTATCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR TCA 90 bp TCTCTCCCGCATCCAAGCCTCCGAGGCTACTGGCTGCCCTCCCTCTaGGGTTCATCCATGCACCCAACAATTCTCCTGAGGCAAAGTTTT +
Preference number: 1 (lower is better)
Translates to: SLPHPSLRGYWLPSL*GSSMHPTILLRQSF
Trigger: AAAACTTTGCCTCAGGAGAATTGTTGGGTGCATGGATGAACCTCAGAGGGAGGGCAGCCAGTAGCCTCGGAGGCTTGGATGCGGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR TCA 90 bp GGCACTGGTGCAGGGGAGCAGGACCTAGGGAACTACATATGTGGATaGGGCCAGGGCAATCTATTTAGCAGTGGGCCAAGATGCGGTATG +
Preference number: 1 (lower is better)
Translates to: GTGAGEQDLGNYICG*GQGNLFSSGPRCGM
Trigger: CATACCGCATCTTGGCCCACTGCTAAATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCTGCACCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR TCA 90 bp GAACAGCACGAAGACGGTGTACATGGCCACAAAAATCCACCACAGTaGCTGGTCCTGGAGCCTCTGCTCGTAGTTCCTCAGGACCACCAC +
Preference number: 1 (lower is better)
Translates to: EQHEDGVHGHKNPPQ*LVLEPLLVVPQDHH
Trigger: GTGGTGGTCCTGAGGAACTACGAGCAGAGGCTCCAGGACCAGTCACTGTGGTGGATTTTTGTGGCCATGTACACCGTCTTCGTGCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR TCA 90 bp ACACAGCAGGTGTCAAGGAGACACCACATGGCCTGCAATTATTTCTaGGCTAGAGAGGGGCCATGCCTGGACGCAACAACCTTCGAGCCT +
Preference number: 1 (lower is better)
Translates to: TQQVSRRHHMACNYF*AREGPCLDATTFEP
Trigger: AGGCTCGAAGGTTGTTGCGTCCAGGCATGGCCCCTCTCTAGCTCAGAAATAATTGCAGGCCATGTGGTGTCTCCTTGACACCTGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 90 bp GAAAAAGGCAACCTCCAGCAGCGTGACTGTGATCATGAACCAGGGTaGGGGGCAGCAGGTGTAGCTGTCATAGTACCACTTGCGGTCAAT +
Preference number: 1 (lower is better)
Translates to: EKGNLQQRDCDHEPG*GAAGVAVIVPLAVN
Trigger: ATTGACCGCAAGTGGTACTATGACAGCTACACCTGCTGCCCCCCACCCTGGTTCATGATCACAGTCACGCTGCTGGAGGTTGCCTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR TCA 90 bp GGTGGTGCTCAAGACAGATTAGTAACCAGCAATCACAGTTCAGAGTaGTGGTTGCTGTGGGAGCACACAAGAGGGAGCCCAATCCAGTCC +
Preference number: 1 (lower is better)
Translates to: GGAQDRLVTSNHSSE*WLLWEHTRGSPIQS
Trigger: GGACTGGATTGGGCTCCCTCTTGTGTGCTCCCACAGCAACCATCACTCTGAACTGTGATTGCTGGTTACTAATCTGTCTTGAGCACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR CCA 90 bp GGAGGGTCATTCCCTCCATCTTGTTTTCTCACCTGTGTAATGGGGTaGGGTGGATTTGATAACCACCATGTTCTCTCCCGCATCCAAGCC +
Preference number: 1 (lower is better)
Translates to: GGSFPPSCFLTCVMG*GGFDNHHVLSRIQA
Trigger: GGCTTGGATGCGGGAGAGAACATGGTGGTTATCAAATCCACCCCACCCCATTACACAGGTGAGAAAACAAGATGGAGGGAATGACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 90 bp GCAGCCGAGAAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATaGCTTTCAGAAAAGGGTCTCCACTGTGTGTCCAAATCTAAACAC +
Preference number: 1 (lower is better)
Translates to: AAEKNDSSHINSSAR*LSEKGLHCVSKSKH
Trigger: GTGTTTAGATTTGGACACACAGTGGAGACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTTCTCGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 90 bp CCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTaGAAATTAAATTGGACGCTGGGGGAAGATCCTGGTGTGGTGAGC +
Preference number: 1 (lower is better)
Translates to: PGKAFTAPRESALRI*KLNWTLGEDPGVVS
Trigger: GCTCACCACACCAGGATCTTCCCCCAGCGTCCAATTTAATTTGCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 90 bp TATCCCTGCATGCATGAAGATGTATGTCAGGTAGCGCCAAACCTGTaGTCGCAGCTGTGGGTGGTAAACCAGGGAGTTCTTCAAGTAACG +
Preference number: 1 (lower is better)
Translates to: YPCMHEDVCQVAPNL*SQLWVVNQGVLQVT
Trigger: CGTTACTTGAAGAACTCCCTGGTTTACCACCCACAGCTGCGAGCACAGGTTTGGCGCTACCTGACATACATCTTCATGCATGCAGGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR CCA 90 bp TTCACGGCACCCAGGGAATCTGCATTACGTATTTGCAAATTAAATTaGACGCTGGGGGAAGATCCTGGTGTGGTGAGCAACAGCTCCCCT +
Preference number: 1 (lower is better)
Translates to: FTAPRESALRICKLN*TLGEDPGVVSNSSP
Trigger: AGGGGAGCTGTTGCTCACCACACCAGGATCTTCCCCCAGCGTCCAATTTAATTTGCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 90 bp GCTGTTGGAACGCTTGTTGCTCATCAGGCACAGGGAGGGATACGGTaGTGCTCAAGACAGATTAGTAACCAGCAATCACAGTTCAGAGTG +
Preference number: 1 (lower is better)
Translates to: AVGTLVAHQAQGGIR*CSRQISNQQSQFRV
Trigger: CACTCTGAACTGTGATTGCTGGTTACTAATCTGTCTTGAGCACCACCGTATCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR TCA 90 bp GGCTGCCCTCCCTCTGAGGTTCATCCATGCACCCAACAATTCTCCTaGGGCAAAGTTTTCCAACTAAACTGGAATTCCTCTTCCTGTAGC +
Preference number: 1 (lower is better)
Translates to: GCPPSEVHPCTQQFS*GKVFQLNWNSSSCS
Trigger: GCTACAGGAAGAGGAATTCCAGTTTAGTTGGAAAACTTTGCCTCAGGAGAATTGTTGGGTGCATGGATGAACCTCAGAGGGAGGGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 90 bp GTTGGAACGCTTGTTGCTCATCAGGCACAGGGAGGGATACGGTGGTaGTCAAGACAGATTAGTAACCAGCAATCACAGTTCAGAGTGATG +
Preference number: 1 (lower is better)
Translates to: VGTLVAHQAQGGIRW*SRQISNQQSQFRVM
Trigger: CATCACTCTGAACTGTGATTGCTGGTTACTAATCTGTCTTGAGCACCACCGTATCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR CCA 90 bp CATGAAGATGTATGTCAGGTAGCGCCAAACCTGTGCTCGCAGCTGTaGGTGGTAAACCAGGGAGTTCTTCAAGTAACGTGGATGAGTTAC +
Preference number: 1 (lower is better)
Translates to: HEDVCQVAPNLCSQL*VVNQGVLQVTWMSY
Trigger: GTAACTCATCCACGTTACTTGAAGAACTCCCTGGTTTACCACCCACAGCTGCGAGCACAGGTTTGGCGCTACCTGACATACATCTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR CCA 90 bp TTCCTCTCCCGTTTAATGAGAGCCAGTGAGTCTATGGCTGCTGTTTaGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGGATAAAAGG +
Preference number: 1 (lower is better)
Translates to: FLSRLMRASESMAAV*GFPSFQFLYPVDKR
Trigger: CCTTTTATCCACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTCACTGGCTCTCATTAAACGGGAGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR TCA 90 bp AGCTCTTTCTCTCCTAAGGGAGATAGGATGGAACCTTTTTGGATATaGAGGCCATCTCAGACGGAAACAAGAGCTGAACCTGGCAAACCT +
Preference number: 1 (lower is better)
Translates to: SSFSPKGDRMEPFWI*RPSQTETRAEPGKP
Trigger: AGGTTTGCCAGGTTCAGCTCTTGTTTCCGTCTGAGATGGCCTTCATATCCAAAAAGGTTCCATCCTATCTCCCTTAGGAGAGAAAGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 90 bp AACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTaGATTACGTATTTGCAAATTAAATTGGACGCTGGGGGAAGATCC +
Preference number: 1 (lower is better)
Translates to: NMNDARKGFHGTQGI*ITYLQIKLDAGGRS
Trigger: GGATCTTCCCCCAGCGTCCAATTTAATTTGCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGCCTCCATGCCTTCTCTaGAGGCGCTGTCGTGCCTCA +
Preference number: 2 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQPPCLL*RRCRAS
Trigger: TGAGGCACGACAGCGCCTGCAGAGAAGGCATGGAGG...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp GGCCACATGGCGGATAAGTCGCTGCGAGAGGCTCAGCCCCTTCTCCTCCAGCAGCGCAGGCGCTCCCTGTaGGTGCTGCTTTTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: GHMADKSLREAQPLLLQQRRRSL*VLLFPP
Trigger: GGGAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCG...CTGCTGGAGGAGAAGGGGCTGAGCCTCTCGCAGCGACTTATCCGCCATGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR GCA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGGCCACCTCTCACGGATaGCCACATGGGCCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTATSHG*PHGPPA
Trigger: TGCAGGGGGCCCATGTGGGCATCCGTGAGAGGTGGC...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp GACCACCACGCCCAGGGTGATGCCCACGGCCACGCCACCCAAGTGCGCCACAAATCTGCCCGGCCTAGCTaGGCTGGTGATGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: DHHAQGDAHGHATQVRHKSARPS*AGDEKK
Trigger: TTTCTTCTCATCACCAGCTCAGCTAGGCCGGGCAGA...TTTGTGGCGCACTTGGGTGGCGTGGCCGTGGGCATCACCCTGGGCGTGGTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR GCA 90 bp GCGGAGCCACACGGCCCGCCCAAACTCCATGCTCATACAGATAAGGGCCACAGCCCTCCAGCAGGGCCTTaGTGCTTAGCCTGCGGTTGC +
Preference number: 2 (lower is better)
Translates to: AEPHGPPKLHAHTDKGHSPPAGP*CLACGC
Trigger: GCAACCGCAGGCTAAGCAGCAAGGCCCTGCTGGAGG...GCTGTGGCCCTTATCTGTATGAGCATGGAGTTTGGGCGGGCCGTGTGGCTCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR CCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGCGCAGGCGCTCCCTGTaGGTGCTGCTTTTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMRRRSL*VLLFPP
Trigger: GGGAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCG...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
3UTR-3UTR TCA 90 bp CTCCCTCCAGCAGGGCCATTCTGCCACCGGTCAGTGATGCTCAGGGGCAGGTGTGCTGGGGCACCCGTGTaGGATGCCAATATCCTGGAA +
Preference number: 2 (lower is better)
Translates to: LPPAGPFCHRSVMLRGRCAGAPV*DANILE
Trigger: TTCCAGGATATTGGCATCTCACACGGGTGCCCCAGC...ACACCTGCCCCTGAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGCCCCTGCATCCTCCATaGCTTCTCTGCAGGCGCTGT +
Preference number: 2 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTPLHPP*LLCRRC
Trigger: ACAGCGCCTGCAGAGAAGGCATGGAGGATGCAGGGG...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp CTCCCTCCAGCAGGGCCATTCTGCCACCGGTCAGTGATGCTCAGGGGCAGGTGTAGGCCCTCTTCTTACTaGAGCCCCAGACACAGCAGG +
Preference number: 2 (lower is better)
Translates to: LPPAGPFCHRSVMLRGRCRPSSY*SPRHSR
Trigger: CCTGCTGTGTCTGGGGCTCCAGTAAGAAGAGGGCCT...ACACCTGCCCCTGAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGACACCGCCAAAGGCGTaGGCCCACAGTGCCACAGGC +
Preference number: 2 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLTPPKA*AHSATG
Trigger: GCCTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGT...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGAGCCCACGACTGGAGCGGTCATGTCAGCCACAGACACTGCCAAGGACCCTGCCCCTGCAGGATGGCTTaGCGGAAGCTGTTGGAACGC +
Preference number: 2 (lower is better)
Translates to: RAHDWSGHVSHRHCQGPCPCRMA*RKLLER
Trigger: GCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGG...GCAGGGTCCTTGGCAGTGTCTGTGGCTGACATGACCGCTCCAGTCGTGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR TCA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCGAAGCCCAGCCCAGGTaGGGGAGGGCCACTCTCACA +
Preference number: 2 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLIEAQPR*GRATLT
Trigger: TGTGAGAGTGGCCCTCCCTCACCTGGGCTGGGCTTC...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGGATCCTTGGAGGGCTTaGGCTCTCCCTCCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLDPWRA*ALPPAG
Trigger: CCCTGCTGGAGGGAGAGCTCAAGCCCTCCAAGGATC...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp CTCCCTCCAGCAGGGCCATTCTGCCACCGGTCAGTGATGCTCAGGGGCAGGTGTAGGCACAACAGATCATaGCCCGGTGCACACCAACCA +
Preference number: 2 (lower is better)
Translates to: LPPAGPFCHRSVMLRGRCRHNRS*PGAHQP
Trigger: TGGTTGGTGTGCACCGGGGCATGATCTGTTGTGCCT...ACACCTGCCCCTGAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGAGCCTACAGGCTCCCTaGTCTGCCCAACCCAGGCAC +
Preference number: 2 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLSLQAP*SAQPRH
Trigger: GTGCCTGGGTTGGGCAGAGCAGGGAGCCTGTAGGCT...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp CTCCCTCCAGCAGGGCCATTCTGCCACCGGTCAGTGATGCTCAGGGGCAGGTGTCTGCAGGCGCTGTCGTaGCTCAGTTACCTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: LPPAGPFCHRSVMLRGRCLQALS*LSYLSH
Trigger: ATGGGAAAGGTAACTGAGGCACGACAGCGCCTGCAG...ACACCTGCCCCTGAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGCAGCACACCACGGTCTaGCACCTCTCACGGATGCCC +
Preference number: 2 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLQHTTV*HLSRMP
Trigger: GGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTG...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGCCCAGACCTTCACCCTaGCCCGATGTCATCAGAGCA +
Preference number: 2 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTPRPSP*PDVIRA
Trigger: TGCTCTGATGACATCGGGCCAGGGTGAAGGTCTGGG...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCCACCCCCTGGCCCCATaGAAGAAGCCCAGCCCAGGT +
Preference number: 2 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVHPLAP*KKPSPG
Trigger: ACCTGGGCTGGGCTTCTTCCATGGGGCCAGGGGGTG...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCGCTGGGCATGGAGGCTaGGGCACCCGTGTGAGATGC +
Preference number: 2 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVAGHGG*GTRVRC
Trigger: GCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGC...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CAA 90 bp CTGCGGTTGCCCTGCAGGATGGCTTGGCGGAAGCTGTTGGAACGCTaGTTGCTCATCAGGCACAGGGAGGGATACGGTGGTGCTCAAGAC +
Preference number: 2 (lower is better)
Translates to: LRLPCRMAWRKLLER*LLIRHREGYGGAQD
Trigger: GTCTTGAGCACCACCGTATCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR CAA 90 bp CTGCTTAGCCTGCGGTTGCCCTGCAGGATGGCTTGGCGGAAGCTGTaGGAACGCTTGTTGCTCATCAGGCACAGGGAGGGATACGGTGGT +
Preference number: 2 (lower is better)
Translates to: LLSLRLPCRMAWRKL*ERLLLIRHREGYGG
Trigger: ACCACCGTATCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR TCA 90 bp ACATGTCCAGTAGGCCCTCTTCTTACTGGAGCCCCAGACACAGCAGGTGTCAAGGAAGCCCAGCCCAGGTaGGGGAGGGCCACTCTCACA +
Preference number: 2 (lower is better)
Translates to: TCPVGPLLTGAPDTAGVKEAQPR*GRATLT
Trigger: TGTGAGAGTGGCCCTCCCTCACCTGGGCTGGGCTTC...CTTGACACCTGCTGTGTCTGGGGCTCCAGTAAGAAGAGGGCCTACTGGACATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp CTCCCTCCAGCAGGGCCATTCTGCCACCGGTCAGTGATGCTCAGGGGCAGGTGTGCCTGCAATTATTTCTaGGCTAGAGAGGGGCCATGC +
Preference number: 2 (lower is better)
Translates to: LPPAGPFCHRSVMLRGRCACNYF*AREGPC
Trigger: GCATGGCCCCTCTCTAGCTCAGAAATAATTGCAGGC...ACACCTGCCCCTGAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp ACAATGTTGGCCAGATGGGCAGAGACGAGAGCATACACCCCTCCAGAAGAGCCCCCAGCAGGGCCTTGCTaGTTAGCCTGCGGTTGCCCT +
Preference number: 2 (lower is better)
Translates to: TMLARWAETRAYTPPEEPPAGPC*LACGCP
Trigger: AGGGCAACCGCAGGCTAAGCAGCAAGGCCCTGCTGG...GGGCTCTTCTGGAGGGGTGTATGCTCTCGTCTCTGCCCATCTGGCCAACATTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR CCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGAGAGGGGCCATGCCTaGACGCAACAACCTTCGAGC +
Preference number: 2 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQERGHA*TQQPSS
Trigger: GCTCGAAGGTTGTTGCGTCCAGGCATGGCCCCTCTC...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGACCTGTGTAATGGGGTaGGGTGGATTTGATAACCAC +
Preference number: 2 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQTCVMG*GGFDNH
Trigger: GTGGTTATCAAATCCACCCCACCCCATTACACAGGT...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGAGCCCACGACTGGAGCGGTCATGTCAGCCACAGACACTGCCAAGGACCCTGCCAAGCCCAATTCGGGTaGCTCCATGCACCATCTCCA +
Preference number: 2 (lower is better)
Translates to: RAHDWSGHVSHRHCQGPCQAQFG*LHAPSP
Trigger: TGGAGATGGTGCATGGAGCCACCCGAATTGGGCTTG...GCAGGGTCCTTGGCAGTGTCTGTGGCTGACATGACCGCTCCAGTCGTGGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR CAA 90 bp CGGTTGCCCTGCAGGATGGCTTGGCGGAAGCTGTTGGAACGCTTGTaGCTCATCAGGCACAGGGAGGGATACGGTGGTGCTCAAGACAGA +
Preference number: 2 (lower is better)
Translates to: RLPCRMAWRKLLERL*LIRHREGYGGAQDR
Trigger: TCTGTCTTGAGCACCACCGTATCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR TCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGCAAAGAGAACCCCTCTaGCCAGACAGCTGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQQREPL*PDSCLL
Trigger: CAGGAGGCAGCTGTCTGGTCAGAGGGGTTCTCTTTG...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGCTAGAGAGGGGCCATaGCTGGACGCAACAACCTTC +
Preference number: 2 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQAREGP*LDATTF
Trigger: GAAGGTTGTTGCGTCCAGGCATGGCCCCTCTCTAGC...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCCAGATCATGCCCCGGTaGACACCAACCAGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLIQIMPR*TPTSPG
Trigger: TCCTGGGCTGGTTGGTGTGCACCGGGGCATGATCTG...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGTCCGAGGCTACTGGCTaGCCTCCCTCTGAGGTTCAT +
Preference number: 2 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQSEATG*PPSEVH
Trigger: ATGAACCTCAGAGGGAGGGCAGCCAGTAGCCTCGGA...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGCAGGCGCTCCCTGTaGGTGCTGCTTTTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPRRRSL*VLLFPP
Trigger: GGGAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCG...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGCCCAGACCTTCACCCTaGCCCGATGTCATCAGAGCA +
Preference number: 2 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLPRPSP*PDVIRA
Trigger: TGCTCTGATGACATCGGGCCAGGGTGAAGGTCTGGG...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAGGAAGAAGCTGCTaGTCAATCCGCAGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQGGRSC*SIRSSE
Trigger: CTCACTGCTGCGGATTGAGCAGCAGCTTCTTCCTCC...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAGGAGGAAGAAGCTaGTGCTCAATCCGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQGGGRS*CSIRSS
Trigger: ACTGCTGCGGATTGAGCAGCAGCTTCTTCCTCCTCC...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp ACAATGTTGGCCAGATGGGCAGAGACGAGAGCATACACCCCTCCAGAAGAGCCCGTAGCGCCAAACCTGTaGTCGCAGCTGTGGGTGGTA +
Preference number: 2 (lower is better)
Translates to: TMLARWAETRAYTPPEEPVAPNL*SQLWVV
Trigger: TACCACCCACAGCTGCGAGCACAGGTTTGGCGCTAC...GGGCTCTTCTGGAGGGGTGTATGCTCTCGTCTCTGCCCATCTGGCCAACATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR CCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAAGGCCCTCTTCTTACTaGAGCCCCAGACACAGCAGG +
Preference number: 2 (lower is better)
Translates to: STGSNMNDARKGFHGTQGRPSSY*SPRHSR
Trigger: CCTGCTGTGTCTGGGGCTCCAGTAAGAAGAGGGCCT...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTGGCCAAGATGCGGTATaGCTGGGCCTCGCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: RGAGPRELHMWMRPGQSIGQDAV*LGLACQ
Trigger: CTGGCAGGCGAGGCCCAGCCATACCGCATCTTGGCC...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CAA 90 bp CAGAGAACAGCTGGGGCTGGTGGTCTAAGGTGTAGACGAGGGTCCTaGGCAGCAGAGGACACACTTAACATGGTGGGAGACACGATTCCG +
Preference number: 2 (lower is better)
Translates to: QRTAGAGGLRCRRGS*AAEDTLNMVGDTIP
Trigger: CGGAATCGTGTCTCCCACCATGTTAAGTGTGTCCTCTGCTGCCAAGGACCCTCGTCTACACCTTAGACCACCAGCCCCAGCTGTTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp CAGCCTCTCTTGCGCCCCCAAAGCTCTTTCTCTCCTAAGGGAGATAGGATGGAACAGATCATGCCCCGGTaGACACCAACCAGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: QPLLRPQSSFSPKGDRMEQIMPR*TPTSPG
Trigger: TCCTGGGCTGGTTGGTGTGCACCGGGGCATGATCTG...TTCCATCCTATCTCCCTTAGGAGAGAAAGAGCTTTGGGGGCGCAAGAGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCAGGCACAACAGATCATaGCCCGGTGCACACCAACCA +
Preference number: 2 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLIRHNRS*PGAHQP
Trigger: TGGTTGGTGTGCACCGGGGCATGATCTGTTGTGCCT...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGAAGTTTATTCCCCCTaGATGGGTCCCTCTCACTGG +
Preference number: 2 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQEVYSP*MGPSHW
Trigger: CCAGTGAGAGGGACCCATGCAGGGGGAATAAACTTC...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp CAGCCTCTCTTGCGCCCCCAAAGCTCTTTCTCTCCTAAGGGAGATAGGATGGAACCCCTGCATCCTCCATaGCTTCTCTGCAGGCGCTGT +
Preference number: 2 (lower is better)
Translates to: QPLLRPQSSFSPKGDRMEPLHPP*LLCRRC
Trigger: ACAGCGCCTGCAGAGAAGGCATGGAGGATGCAGGGG...TTCCATCCTATCTCCCTTAGGAGAGAAAGAGCTTTGGGGGCGCAAGAGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGACTTGGAAGTCATGGTTaGGAGAGGGGATGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: STGSNMNDARKGFHGTQGLGSHG*ERGWRW
Trigger: CCACCTCCATCCCCTCTCCCAACCATGACTTCCAAG...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp ACATGTCCAGTAGGCCCTCTTCTTACTGGAGCCCCAGACACAGCAGGTGTCAAGTCTGCCCGGCCTAGCTaGGCTGGTGATGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: TCPVGPLLTGAPDTAGVKSARPS*AGDEKK
Trigger: TTTCTTCTCATCACCAGCTCAGCTAGGCCGGGCAGA...CTTGACACCTGCTGTGTCTGGGGCTCCAGTAAGAAGAGGGCCTACTGGACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp CTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGCCACATCAACTCTCTGCCCGGCCTAGCTaGGCTGGTGATGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: LARCHQSSREKRQQPHQLSARPS*AGDEKK
Trigger: TTTCTTCTCATCACCAGCTCAGCTAGGCCGGGCAGA...GAGTTGATGTGGCTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGCCTCCTCTGAGGCACTaGCTTCCATCTACATCTTTC +
Preference number: 2 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQPPLRH*LPSTSF
Trigger: GAAAGATGTAGATGGAAGTCAGTGCCTCAGAGGAGG...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAGAAGTTTATTCCCCCTaGATGGGTCCCTCTCACTGG +
Preference number: 2 (lower is better)
Translates to: STGSNMNDARKGFHGTQGEVYSP*MGPSHW
Trigger: CCAGTGAGAGGGACCCATGCAGGGGGAATAAACTTC...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp CTGTGGGTGGTAAACCAGGGAGTTCTTCAAGTAACGTGGATGAGTTACCTGCAGAGCCTGCGGTTGCCCTaGAGGATGGCTTGGCGGAAG +
Preference number: 2 (lower is better)
Translates to: LWVVNQGVLQVTWMSYLQSLRLP*RMAWRK
Trigger: CTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCT...CTGCAGGTAACTCATCCACGTTACTTGAAGAACTCCCTGGTTTACCACCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR CCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTGAGAGGGGCCATGCCTaGACGCAACAACCTTCGAGC +
Preference number: 2 (lower is better)
Translates to: RGAGPRELHMWMRPGQSIERGHA*TQQPSS
Trigger: GCTCGAAGGTTGTTGCGTCCAGGCATGGCCCCTCTC...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGCTAAGGGAGATAGGATaGAACCTTTTTGGATATGAA +
Preference number: 2 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQLREIG*NLFGYE
Trigger: TTCATATCCAAAAAGGTTCCATCCTATCTCCCTTAG...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTGGATGGGCACCAGGCTaGAGGAAGACCGTTCCCACA +
Preference number: 2 (lower is better)
Translates to: RGAGPRELHMWMRPGQSIGWAPG*RKTVPT
Trigger: TGTGGGAACGGTCTTCCTCCAGCCTGGTGCCCATCC...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAGAGCCAGTGAGTCTATaGCTGCTGTTTGGGGATTCC +
Preference number: 2 (lower is better)
Translates to: STGSNMNDARKGFHGTQGEPVSL*LLFGDS
Trigger: GGAATCCCCAAACAGCAGCCATAGACTCACTGGCTC...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTGCTGGGGCACCCGTGTaGGATGCCAATATCCTGGAA +
Preference number: 2 (lower is better)
Translates to: RGAGPRELHMWMRPGQSIAGAPV*DANILE
Trigger: TTCCAGGATATTGGCATCTCACACGGGTGCCCCAGC...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGTGGCTGCCCTCCCTCTaGGGTTCATCCATGCACCCA +
Preference number: 2 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVWLPSL*GSSMHP
Trigger: TGGGTGCATGGATGAACCTCAGAGGGAGGGCAGCCA...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCGGCACCCGTGTGAGATaGCAATATCCTGGAAGAAAG +
Preference number: 2 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVGTRVR*QYPGRK
Trigger: CTTTCTTCCAGGATATTGGCATCTCACACGGGTGCC...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCCCAGCAGGGCCATTCTaGCACCGGTCAGTGATGCTC +
Preference number: 2 (lower is better)
Translates to: MMPGKAFTAPRESALRICPAGPF*HRSVML
Trigger: GAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGG...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp ACACTTAACATGGTGGGAGACACGATTCCGCCTCCACTGTCCTTCTCAGTAACATCAGCATGGCACTGGTaGAGGGGAGCAGGACCTAGG +
Preference number: 2 (lower is better)
Translates to: TLNMVGDTIPPPLSFSVTSAWHW*RGAGPR
Trigger: CCTAGGTCCTGCTCCCCTGCACCAGTGCCATGCTGA...TGTTACTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp AGAGCCCACGACTGGAGCGGTCATGTCAGCCACAGACACTGCCAAGGACCCTGCCAGGTGTTCTATCCCTaGATGCATGAAGATGTATGT +
Preference number: 2 (lower is better)
Translates to: RAHDWSGHVSHRHCQGPCQVFYP*MHEDVC
Trigger: ACATACATCTTCATGCATGCAGGGATAGAACACCTG...GCAGGGTCCTTGGCAGTGTCTGTGGCTGACATGACCGCTCCAGTCGTGGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR CCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTCGCAGGCGCTCCCTGTaGGTGCTGCTTTTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFRRRSL*VLLFPP
Trigger: GGGAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCG...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTGATGGGAAGCCACTGTaGCCCAAGACCCCAAATGCC +
Preference number: 2 (lower is better)
Translates to: RGAGPRELHMWMRPGQSIDGKPL*PKTPNA
Trigger: GGCATTTGGGGTCTTGGGCCACAGTGGCTTCCCATC...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp ATGTCAGGTAGCGCCAAACCTGTGCTCGCAGCTGTGGGTGGTAAACCAGGGAGTCTTGGCGGAAGCTGTTaGAACGCTTGTTGCTCATCA +
Preference number: 2 (lower is better)
Translates to: MSGSAKPVLAAVGGKPGSLGGSC*NACCSS
Trigger: TGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAG...ACTCCCTGGTTTACCACCCACAGCTGCGAGCACAGGTTTGGCGCTACCTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR CCA 90 bp CAGCTGCAGCACCACATTGAGTCCCAGGTGTTCTATCCCTGCATGCATGAAGATGATCATGAACCAGGGTaGGGGGCAGCAGGTGTAGCT +
Preference number: 2 (lower is better)
Translates to: QLQHHIESQVFYPCMHEDDHEPG*GAAGVA
Trigger: AGCTACACCTGCTGCCCCCCACCCTGGTTCATGATC...ATCTTCATGCATGCAGGGATAGAACACCTGGGACTCAATGTGGTGCTGCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR TCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCAGCCTGCAATTATTTCTaGGCTAGAGAGGGGCCATGC +
Preference number: 2 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPACNYF*AREGPC
Trigger: GCATGGCCCCTCTCTAGCTCAGAAATAATTGCAGGC...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGATCCTTGGAGGGCTTaGGCTCTCCCTCCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFDPWRA*ALPPAG
Trigger: CCCTGCTGGAGGGAGAGCTCAAGCCCTCCAAGGATC...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp ACACTTAACATGGTGGGAGACACGATTCCGCCTCCACTGTCCTTCTCAGTAACAGAGGCAGCAATGTCCTaGCTCCTTCTGCATCCTCCC +
Preference number: 2 (lower is better)
Translates to: TLNMVGDTIPPPLSFSVTEAAMS*LLLHPP
Trigger: GGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTC...TGTTACTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGCAAAGAGAACCCCTCTaGCCAGACAGCTGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVQREPL*PDSCLL
Trigger: CAGGAGGCAGCTGTCTGGTCAGAGGGGTTCTCTTTG...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGACACAAACATTACAGTaGCCCAGAGTCTTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLTQTLQ*PRVFCP
Trigger: AGGACAGAAGACTCTGGGCCACTGTAATGTTTGTGT...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAACAAGGAGACACCACATaGCCTGCAATTATTTCTGAG +
Preference number: 2 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKQGDTT*PAIISE
Trigger: CTCAGAAATAATTGCAGGCCATGTGGTGTCTCCTTG...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAACCTGTGTAATGGGGTaGGGTGGATTTGATAACCAC +
Preference number: 2 (lower is better)
Translates to: STGSNMNDARKGFHGTQGTCVMG*GGFDNH
Trigger: GTGGTTATCAAATCCACCCCACCCCATTACACAGGT...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCGATGGGAAGCCACTGTaGCCCAAGACCCCAAATGCC +
Preference number: 2 (lower is better)
Translates to: MMPGKAFTAPRESALRICDGKPL*PKTPNA
Trigger: GGCATTTGGGGTCTTGGGCCACAGTGGCTTCCCATC...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGAGAGTCCTATTAGCTaGCAAAAGAGCCTCATTAGG +
Preference number: 2 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQESPIS*QKSLIR
Trigger: CCTAATGAGGCTCTTTTGCCAGCTAATAGGACTCTC...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCGCTGGGGGAAGATCCTaGTGTGGTGAGCAACAGCTC +
Preference number: 2 (lower is better)
Translates to: MMPGKAFTAPRESALRICAGGRS*CGEQQL
Trigger: GAGCTGTTGCTCACCACACCAGGATCTTCCCCCAGC...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp GTGGGTGGTAAACCAGGGAGTTCTTCAAGTAACGTGGATGAGTTACCTGCAGTAGGTTGCCCTGCAGGATaGCTTGGCGGAAGCTGTTGG +
Preference number: 2 (lower is better)
Translates to: VGGKPGSSSSNVDELPAVGCPAG*LGGSCW
Trigger: CCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACC...TACTGCAGGTAACTCATCCACGTTACTTGAAGAACTCCCTGGTTTACCACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR CCA 90 bp AGCAGCTTGAACTGGCACTTCATGCCTGACCAGTTCATGACAATGTTGGCCAGAAGAAGAGCCCACGACTaGAGCGGTCATGTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: SSLNWHFMPDQFMTMLARRRAHD*SGHVSH
Trigger: GTGGCTGACATGACCGCTCCAGTCGTGGGCTCTTCT...TCTGGCCAACATTGTCATGAACTGGTCAGGCATGAAGTGCCAGTTCAAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR TCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGACCCAACAATTCTCCTaGGGCAAAGTTTTCCAACTA +
Preference number: 2 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQTQQFS*GKVFQL
Trigger: TAGTTGGAAAACTTTGCCTCAGGAGAATTGTTGGGT...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTCCAGCAGGGCCATTCTaGCACCGGTCAGTGATGCTC +
Preference number: 2 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFPAGPF*HRSVML
Trigger: GAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGG...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCACAGAGGTGGCACTCTaGTCATTCCACCCACACCAC +
Preference number: 2 (lower is better)
Translates to: MMPGKAFTAPRESALRICTEVAL*SFHPHH
Trigger: GTGGTGTGGGTGGAATGAGCAGAGTGCCACCTCTGT...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGACAAGGAGACACCACATaGCCTGCAATTATTTCTGAG +
Preference number: 2 (lower is better)
Translates to: STGSNMNDARKGFHGTQGQGDTT*PAIISE
Trigger: CTCAGAAATAATTGCAGGCCATGTGGTGTCTCCTTG...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTTCACGGATGCCCACATaGGCCCCCTGCATCCTCCAT +
Preference number: 2 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFSRMPT*APCILH
Trigger: ATGGAGGATGCAGGGGGCCCATGTGGGCATCCGTGA...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCGCCAGGACAGGAATCTaGAGGGGATTCTCCATCCCT +
Preference number: 2 (lower is better)
Translates to: MMPGKAFTAPRESALRICARTGI*RGFSIP
Trigger: AGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CAA 90 bp TTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCAAATTAAATaGGACGCTGGGGGAAGATCCTGGTGTGGTGAGCAACAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: FHGTQGICITYLQIK*DAGGRSWCGEQQLP
Trigger: GGGGAGCTGTTGCTCACCACACCAGGATCTTCCCCCAGCGTCCAATTTAATTTGCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CAA 90 bp GCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTaGCAAATTAAATTGGACGCTGGGGGAAGATCCTGGTGTGGTGAG +
Preference number: 2 (lower is better)
Translates to: ARKGFHGTQGICITY*QIKLDAGGRSWCGE
Trigger: CTCACCACACCAGGATCTTCCCCCAGCGTCCAATTTAATTTGCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTAGGGAGGGAGAAGTCTaGAGCTGGTCCTGGGTCTGT +
Preference number: 2 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFREGEV*SWSWVC
Trigger: ACAGACCCAGGACCAGCTTCAGACTTCTCCCTCCCT...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGCTGCCAGTGAGTGAGTaGGCCCATTTACATGTAGTC +
Preference number: 2 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVLPVSE*AHLHVV
Trigger: GACTACATGTAAATGGGCTCACTCACTCACTGGCAG...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTCTGCAGGCGCTGTCGTaGCTCAGTTACCTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFLQALS*LSYLSH
Trigger: ATGGGAAAGGTAACTGAGGCACGACAGCGCCTGCAG...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp TTACCTGCAGTACAAATTGACCTAGTGACACCCCATTGTAGAGGAAAAAGGCAATGGCGGATAAGTCGCTaGGAGAGGCTCAGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: LPAVQIDLVTPHCRGKRQWRISR*ERLSPF
Trigger: GAAGGGGCTGAGCCTCTCGCAGCGACTTATCCGCCA...TTGCCTTTTTCCTCTACAATGGGGTGTCACTAGGTCAATTTGTACTGCAGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR CCA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCAGGACACACTTAACATaGTGGGAGACACGATTCCGC +
Preference number: 2 (lower is better)
Translates to: MMPGKAFTAPRESALRICRTHLT*WETRFR
Trigger: GCGGAATCGTGTCTCCCACCATGTTAAGTGTGTCCT...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGGGGTGGAACTTGGAATaGAGTTTATTCCCCCTGCAT +
Preference number: 2 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVGWNLE*SLFPLH
Trigger: ATGCAGGGGGAATAAACTTCATTCCAAGTTCCACCC...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAATGGCTGCCCTCCCTCTaGGGTTCATCCATGCACCCA +
Preference number: 2 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKWLPSL*GSSMHP
Trigger: TGGGTGCATGGATGAACCTCAGAGGGAGGGCAGCCA...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGGAACCTTTTTGGATATaGAGGCCATCTCAGACGGAA +
Preference number: 2 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVEPFWI*RPSQTE
Trigger: TTCCGTCTGAGATGGCCTTCATATCCAAAAAGGTTC...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCTTTAATGAGAGCCAGTaGGTCTATGGCTGCTGTTTG +
Preference number: 2 (lower is better)
Translates to: MMPGKAFTAPRESALRICFNESQ*VYGCCL
Trigger: CAAACAGCAGCCATAGACTCACTGGCTCTCATTAAA...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR TCA 90 bp GCAGTACAAATTGACCTAGTGACACCCCATTGTAGAGGAAAAAGGCAACCTCCAAATCACAGTTCAGAGTaGTGGTTGCTGTGGGAGCAC +
Preference number: 2 (lower is better)
Translates to: AVQIDLVTPHCRGKRQPPNHSSE*WLLWEH
Trigger: GTGCTCCCACAGCAACCATCACTCTGAACTGTGATT...TGGAGGTTGCCTTTTTCCTCTACAATGGGGTGTCACTAGGTCAATTTGTACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR GCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAAGCTAGAGAGGGGCCATaGCTGGACGCAACAACCTTC +
Preference number: 2 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKAREGP*LDATTF
Trigger: GAAGGTTGTTGCGTCCAGGCATGGCCCCTCTCTAGC...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR GCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAAGGAGGAAGAAGCTGCTaGTCAATCCGCAGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKGGRSC*SIRSSE
Trigger: CTCACTGCTGCGGATTGAGCAGCAGCTTCTTCCTCC...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAACTAAGGGAGATAGGATaGAACCTTTTTGGATATGAA +
Preference number: 2 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKLREIG*NLFGYE
Trigger: TTCATATCCAAAAAGGTTCCATCCTATCTCCCTTAG...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 72 bp GCCCACGGCCACGCCACCCAAGTGCGCCACAAAGCTTaGGTGAGGGCACGGGGGATAGGCCGACGGGTGGAA +
Preference number: 3 (lower is better)
Translates to: AHGHATQVRHKA*VRARGIGRRVE
Trigger: TTCCACCCGTCGGCCTATCCCCCGTGCCCTCACCCAAGCTTTGTGGCGCACTTGGGTGGCGTGGCCGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR TCA 72 bp GAACGGTGGGCAGGGCACACACAAGACGCCCCAGGCTaGCGCAACACCGCCAAAGGCGTGGGCCCACAGTGC +
Preference number: 3 (lower is better)
Translates to: ERWAGHTQDAPG*RNTAKGVGPQC
Trigger: GCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCTTGTGTGTGCCCTGCCCACCGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 72 bp AAGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTaGGCCCACAGTGCCACAGGCTGCGGCCCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: KTPQADATPPKA*AHSATGCGPQH
Trigger: ATGCTGAGGGCCGCAGCCTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CAA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGGGATCCTTGGAGGGCTaGAGCTCTCCCTCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQGSLEG*SSPSSR
Trigger: CCTGCTGGAGGGAGAGCTCAAGCCCTCCAAGGATCC...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 72 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATaGCCCGGTGCACACCAACCAGCCCAGGAGGGCACC +
Preference number: 3 (lower is better)
Translates to: APCSAQPRHNRS*PGAHQPAQEGT
Trigger: GGTGCCCTCCTGGGCTGGTTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 72 bp GTGGGCCCACAGTGCCACAGGCTGCGGCCCTCAGCATaGCACTGGTGCAGGGGAGCAGGACCTAGGGAACTA +
Preference number: 3 (lower is better)
Translates to: VGPQCHRLRPSA*HWCRGAGPREL
Trigger: TAGTTCCCTAGGTCCTGCTCCCCTGCACCAGTGCCATGCTGAGGGCCGCAGCCTGTGGCACTGTGGGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 72 bp GTCTGCCACCTCTCACGGATGCCCACATGGGCCCCCTaGATCCTCCATGCCTTCTCTGCAGGCGCTGTCGTG +
Preference number: 3 (lower is better)
Translates to: VCHLSRMPTWAP*ILHAFSAGAVV
Trigger: CACGACAGCGCCTGCAGAGAAGGCATGGAGGATGCAGGGGGCCCATGTGGGCATCCGTGAGAGGTGGCAGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CAA 90 bp GGCCACATGGCGGATAAGTCGCTGCGAGAGGCTCAGCCCCTTCTCCTCCAGCAGGCCCTGCAGGATGGCTaGGCGGAAGCTGTTGGAACG +
Preference number: 3 (lower is better)
Translates to: GHMADKSLREAQPLLLQQALQDG*AEAVGT
Trigger: CGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGC...CTGCTGGAGGAGAAGGGGCTGAGCCTCTCGCAGCGACTTATCCGCCATGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR GCA 72 bp CTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTaGACACCAACCAGCCCAGGAGGGCACCCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: LCPTQAQQIMPR*TPTSPGGHPGF
Trigger: GAAACCAGGGTGCCCTCCTGGGCTGGTTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CAA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGAGGACACGGCCAGCCTaGGCCATGGGGAAGTGCTGC +
Preference number: 3 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQRTRPA*AMGKCC
Trigger: GCAGCACTTCCCCATGGCCAAGGCTGGCCGTGTCCT...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CAA 90 bp CGACTGGAGCGGTCATGTCAGCCACAGACACTGCCAAGGACCCTGCCACAACACCTGCTTAGCCTGCGGTaGCCCTGCAGGATGGCTTGG +
Preference number: 3 (lower is better)
Translates to: RLERSCQPQTLPRTLPQHLLSLR*PCRMAW
Trigger: CCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCAG...GTGTTGTGGCAGGGTCCTTGGCAGTGTCTGTGGCTGACATGACCGCTCCAGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR TCA 72 bp CTCTCCCTCCAGCAGGGCCATTCTGCCACCGGTCAGTaGTGCTCAGGGGCAGGTGTGGAAGGGACAGGAGAT +
Preference number: 3 (lower is better)
Translates to: LSLQQGHSATGQ*CSGAGVEGTGD
Trigger: ATCTCCTGTCCCTTCCACACCTGCCCCTGAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGGAGGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR TCA 72 bp CCACTGTGGCCCAAGACCCCAAATGCCTGGCCTGACTaGCCCTGGACCCTGCTACACTCAAGGGCCAGGATG +
Preference number: 3 (lower is better)
Translates to: PLWPKTPNAWPD*PWTLLHSRARM
Trigger: CATCCTGGCCCTTGAGTGTAGCAGGGTCCAGGGTCAGTCAGGCCAGGCATTTGGGGTCTTGGGCCACAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR TCA 72 bp GAAGCCACTGTGGCCCAAGACCCCAAATGCCTGGCCTaGCTGACCCTGGACCCTGCTACACTCAAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: EATVAQDPKCLA*LTLDPATLKGQ
Trigger: CTGGCCCTTGAGTGTAGCAGGGTCCAGGGTCAGTCAGGCCAGGCATTTGGGGTCTTGGGCCACAGTGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 72 bp AGCAAGGACATTCAGCAACCACAGCACACCACGGTCTaGCACCTCTCACGGATGCCCACATGGGCCCCCTGC +
Preference number: 3 (lower is better)
Translates to: SKDIQQPQHTTV*HLSRMPTWAPC
Trigger: GCAGGGGGCCCATGTGGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 72 bp CAGCCCAGGCAGAGGCAGCAATGTCCTGACTCCTTCTaGATCCTCCCCTGGTCTTCCCTGAGCCCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: QPRQRQQCPDSF*ILPWSSLSPAP
Trigger: TGGAGCTGGGCTCAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 72 bp TCTCCTCCAGCAGGGCCTTGCTGCTTAGCCTGCGGTTaGCCTGCAGGATGGCTTGGCGGAAGCTGTTGGAAC +
Preference number: 3 (lower is better)
Translates to: SPPAGPCCLACG*PAGWLGGSCWN
Trigger: GTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCAGCAAGGCCCTGCTGGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR CAA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGTGGGGTGGGGTGGATTaGATAACCACCATGTTCTCT +
Preference number: 3 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQWGGVD*ITTMFS
Trigger: AGAGAACATGGTGGTTATCAAATCCACCCCACCCCA...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 72 bp GTTCTCTCCCGCATCCAAGCCTCCGAGGCTACTGGCTaGCCTCCCTCTGAGGTTCATCCATGCACCCAACAA +
Preference number: 3 (lower is better)
Translates to: VLSRIQASEATG*PPSEVHPCTQQ
Trigger: TTGTTGGGTGCATGGATGAACCTCAGAGGGAGGGCAGCCAGTAGCCTCGGAGGCTTGGATGCGGGAGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR GCA 72 bp GCAGGATGGCTTGGCGGAAGCTGTTGGAACGCTTGTTaGTCATCAGGCACAGGGAGGGATACGGTGGTGCTC +
Preference number: 3 (lower is better)
Translates to: AGWLGGSCWNAC*SSGTGRDTVVL
Trigger: GAGCACCACCGTATCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR CCA 72 bp TGCGGTTGCCCTGCAGGATGGCTTGGCGGAAGCTGTTaGAACGCTTGTTGCTCATCAGGCACAGGGAGGGAT +
Preference number: 3 (lower is better)
Translates to: CGCPAGWLGGSC*NACCSSGTGRD
Trigger: ATCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR CCA 72 bp GACGAGAGCATACACCCCTCCAGAAGAGCCCACGACTaGAGCGGTCATGTCAGCCACAGACACTGCCAAGGA +
Preference number: 3 (lower is better)
Translates to: DESIHPSRRAHD*SGHVSHRHCQG
Trigger: TCCTTGGCAGTGTCTGTGGCTGACATGACCGCTCCAGTCGTGGGCTCTTCTGGAGGGGTGTATGCTCTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR TCA 72 bp CATCCAAGCCTCCGAGGCTACTGGCTGCCCTCCCTCTaGGGTTCATCCATGCACCCAACAATTCTCCTGAGG +
Preference number: 3 (lower is better)
Translates to: HPSLRGYWLPSL*GSSMHPTILLR
Trigger: CCTCAGGAGAATTGTTGGGTGCATGGATGAACCTCAGAGGGAGGGCAGCCAGTAGCCTCGGAGGCTTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR TCA 72 bp TGCGGTATGGCTGGGCCTCGCCTGCCAGTGAGTGAGTaGGCCCATTTACATGTAGTCACCAGGATGGGAAGC +
Preference number: 3 (lower is better)
Translates to: CGMAGPRLPVSE*AHLHVVTRMGS
Trigger: GCTTCCCATCCTGGTGACTACATGTAAATGGGCTCACTCACTCACTGGCAGGCGAGGCCCAGCCATACCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 72 bp GAGGAAGCCCCCTCTCCAGGTCATACCAGACAGAGGTaGCACTCTGCTCATTCCACCCACACCACAGAATCC +
Preference number: 3 (lower is better)
Translates to: EEAPSPGHTRQR*HSAHSTHTTES
Trigger: GGATTCTGTGGTGTGGGTGGAATGAGCAGAGTGCCACCTCTGTCTGGTATGACCTGGAGAGGGGGCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 72 bp TCCGCCTCCACTGTCCTTCTCAGTAACAAGCTTCCCTaGGAGTCCCCGAGGGAGCTGAGTGCTTCTATGAGG +
Preference number: 3 (lower is better)
Translates to: SASTVLLSNKLP*ESPRELSASMR
Trigger: CCTCATAGAAGCACTCAGCTCCCTCGGGGACTCCCAGGGAAGCTTGTTACTGAGAAGGACAGTGGAGGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 72 bp TACCTCCACCAGCCTGAAGATTTACACACCACCCCCTaGGCTGGCAGCCACCTCAGACAAGGAAAGAGGCAC +
Preference number: 3 (lower is better)
Translates to: YLHQPEDLHTTP*AGSHLRQGKRH
Trigger: GTGCCTCTTTCCTTGTCTGAGGTGGCTGCCAGCCCAGGGGGTGGTGTGTAAATCTTCAGGCTGGTGGAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 72 bp TTGCTGCTTAGCCTGCGGTTGCCCTGCAGGATGGCTTaGCGGAAGCTGTTGGAACGCTTGTTGCTCATCAGG +
Preference number: 3 (lower is better)
Translates to: LLLSLRLPCRMA*RKLLERLLLIR
Trigger: CCTGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR CAA 90 bp ATGTCAGGTAGCGCCAAACCTGTGCTCGCAGCTGTGGGTGGTAAACCAGGGAGTCTGTTGGAACGCTTGTaGCTCATCAGGCACAGGGAG +
Preference number: 3 (lower is better)
Translates to: MSGSAKPVLAAVGGKPGSLLERL*LIRHRE
Trigger: CTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAG...ACTCCCTGGTTTACCACCCACAGCTGCGAGCACAGGTTTGGCGCTACCTGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR CCA 72 bp GAGGGTCCTTGGCAGCAGAGGACACACTTAACATGGTaGGAGACACGATTCCGCCTCCACTGTCCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: EGPWQQRTHLTW*ETRFRLHCPSQ
Trigger: CTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGTGTCCTCTGCTGCCAAGGACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 72 bp GACGAGGGTCCTTGGCAGCAGAGGACACACTTAACATaGTGGGAGACACGATTCCGCCTCCACTGTCCTTCT +
Preference number: 3 (lower is better)
Translates to: DEGPWQQRTHLT*WETRFRLHCPS
Trigger: AGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGTGTCCTCTGCTGCCAAGGACCCTCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CAA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAGTCTATGGCTGCTGTTaGGGGATTCCCCAGCTTTCA +
Preference number: 3 (lower is better)
Translates to: STGSNMNDARKGFHGTQGVYGCC*GIPQLS
Trigger: TGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGAC...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CAA 90 bp ACACTTAACATGGTGGGAGACACGATTCCGCCTCCACTGTCCTTCTCAGTAACAAGCATCCAGGGATCCTaGGAGGGCTTGAGCTCTCCC +
Preference number: 3 (lower is better)
Translates to: TLNMVGDTIPPPLSFSVTSIQGS*EGLSSP
Trigger: GGGAGAGCTCAAGCCCTCCAAGGATCCCTGGATGCT...TGTTACTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR TCA 72 bp GTGTCAAGGAGACACCACATGGCCTGCAATTATTTCTaGGCTAGAGAGGGGCCATGCCTGGACGCAACAACC +
Preference number: 3 (lower is better)
Translates to: VSRRHHMACNYF*AREGPCLDATT
Trigger: GGTTGTTGCGTCCAGGCATGGCCCCTCTCTAGCTCAGAAATAATTGCAGGCCATGTGGTGTCTCCTTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR TCA 72 bp GCAGGGGAGCAGGACCTAGGGAACTACATATGTGGATaGGGCCAGGGCAATCTATTTAGCAGTGGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: AGEQDLGNYICG*GQGNLFSSGPR
Trigger: TCTTGGCCCACTGCTAAATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR TCA 72 bp GAAGACGGTGTACATGGCCACAAAAATCCACCACAGTaGCTGGTCCTGGAGCCTCTGCTCGTAGTTCCTCAG +
Preference number: 3 (lower is better)
Translates to: EDGVHGHKNPPQ*LVLEPLLVVPQ
Trigger: CTGAGGAACTACGAGCAGAGGCTCCAGGACCAGTCACTGTGGTGGATTTTTGTGGCCATGTACACCGTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR CCA 72 bp GTATGTCAGGTAGCGCCAAACCTGTGCTCGCAGCTGTaGGTGGTAAACCAGGGAGTTCTTCAAGTAACGTGG +
Preference number: 3 (lower is better)
Translates to: VCQVAPNLCSQL*VVNQGVLQVTW
Trigger: CCACGTTACTTGAAGAACTCCCTGGTTTACCACCCACAGCTGCGAGCACAGGTTTGGCGCTACCTGACATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR CAA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGGATCCTTGGAGGGCTaGAGCTCTCCCTCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFGSLEG*SSPSSR
Trigger: CCTGCTGGAGGGAGAGCTCAAGCCCTCCAAGGATCC...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 72 bp CCTGCAATTATTTCTGAGCTAGAGAGGGGCCATGCCTaGACGCAACAACCTTCGAGCCTTCCCATGTCTCTT +
Preference number: 3 (lower is better)
Translates to: PAIISELERGHA*TQQPSSLPMSL
Trigger: AAGAGACATGGGAAGGCTCGAAGGTTGTTGCGTCCAGGCATGGCCCCTCTCTAGCTCAGAAATAATTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 72 bp TTCATGCCTGACCAGTTCATGACAATGTTGGCCAGATaGGCAGAGACGAGAGCATACACCCCTCCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: FMPDQFMTMLAR*AETRAYTPPEE
Trigger: CTCTTCTGGAGGGGTGTATGCTCTCGTCTCTGCCCATCTGGCCAACATTGTCATGAACTGGTCAGGCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR CCA 72 bp TCCAGAAGACAGCGAACAGCACGAAGACGGTGTACATaGCCACAAAAATCCACCACAGTGACTGGTCCTGGA +
Preference number: 3 (lower is better)
Translates to: SRRQRTARRRCT*PQKSTTVTGPG
Trigger: TCCAGGACCAGTCACTGTGGTGGATTTTTGTGGCCATGTACACCGTCTTCGTGCTGTTCGCTGTCTTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR CAA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGCAGGCCTGGCGTTCTTaGTTCTTCTGGGCTGTCAGT +
Preference number: 3 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVQAWRS*FFWAVS
Trigger: ACTGACAGCCCAGAAGAACAAAGAACGCCAGGCCTG...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CAA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGTTCTCCTTTGAAGGTTaGTTTTCCCTTCCCCAGTTT +
Preference number: 3 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQFSFEG*FSLPQF
Trigger: AAACTGGGGAAGGGAAAACAAACCTTCAAAGGAGAA...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CAA 90 bp CTGTGGGTGGTAAACCAGGGAGTTCTTCAAGTAACGTGGATGAGTTACCTGCAGGCTTGGCGGAAGCTGTaGGAACGCTTGTTGCTCATC +
Preference number: 3 (lower is better)
Translates to: LWVVNQGVLQVTWMSYLQAWRKL*ERLLLI
Trigger: GATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGC...CTGCAGGTAACTCATCCACGTTACTTGAAGAACTCCCTGGTTTACCACCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR-3UTR CAA 90 bp AGCAGCTTGAACTGGCACTTCATGCCTGACCAGTTCATGACAATGTTGGCCAGAAGCTGCAGCACCACATaGAGTCCCAGGTGTTCTATC +
Preference number: 3 (lower is better)
Translates to: SSLNWHFMPDQFMTMLARSCSTT*SPRCSI
Trigger: GATAGAACACCTGGGACTCAATGTGGTGCTGCAGCT...TCTGGCCAACATTGTCATGAACTGGTCAGGCATGAAGTGCCAGTTCAAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR GCA 72 bp ATGCATGAAGATGTATGTCAGGTAGCGCCAAACCTGTaGTCGCAGCTGTGGGTGGTAAACCAGGGAGTTCTT +
Preference number: 3 (lower is better)
Translates to: MHEDVCQVAPNL*SQLWVVNQGVL
Trigger: AAGAACTCCCTGGTTTACCACCCACAGCTGCGAGCACAGGTTTGGCGCTACCTGACATACATCTTCATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR TCA 72 bp CAAGACAGATTAGTAACCAGCAATCACAGTTCAGAGTaGTGGTTGCTGTGGGAGCACACAAGAGGGAGCCCA +
Preference number: 3 (lower is better)
Translates to: QDRLVTSNHSSE*WLLWEHTRGSP
Trigger: TGGGCTCCCTCTTGTGTGCTCCCACAGCAACCATCACTCTGAACTGTGATTGCTGGTTACTAATCTGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
3UTR CCA 72 bp TTCCCTCCATCTTGTTTTCTCACCTGTGTAATGGGGTaGGGTGGATTTGATAACCACCATGTTCTCTCCCGC +
Preference number: 3 (lower is better)
Translates to: FPPSCFLTCVMG*GGFDNHHVLSR
Trigger: GCGGGAGAGAACATGGTGGTTATCAAATCCACCCCACCCCATTACACAGGTGAGAAAACAAGATGGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CCA 72 bp CCCAGGGAATCTGCATTACGTATTTGCAAATTAAATTaGACGCTGGGGGAAGATCCTGGTGTGGTGAGCAAC +
Preference number: 3 (lower is better)
Translates to: PRESALRICKLN*TLGEDPGVVSN
Trigger: GTTGCTCACCACACCAGGATCTTCCCCCAGCGTCCAATTTAATTTGCAAATACGTAATGCAGATTCCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR-3UTR CAA 90 bp TTACCTGCAGTACAAATTGACCTAGTGACACCCCATTGTAGAGGAAAAAGGCAAAAGCTGTTGGAACGCTaGTTGCTCATCAGGCACAGG +
Preference number: 3 (lower is better)
Translates to: LPAVQIDLVTPHCRGKRQKLLER*LLIRHR
Trigger: CCTGTGCCTGATGAGCAACAAGCGTTCCAACAGCTT...TTGCCTTTTTCCTCTACAATGGGGTGTCACTAGGTCAATTTGTACTGCAGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGGCCGCCAAACTTCACTaGGCTAGCTGCCCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQAAKLH*ASCPAG
Trigger: GCCGGCGGGGCAGCTAGCGCAGTGAAGTTTGGCGGC...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269051.9
3UTR CAA 72 bp TGCCCACGGCCACGCCACCCAAGTGCGCCACAAAGCTaGGGTGAGGGCACGGGGGATAGGCCGACGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CPRPRHPSAPQS*GEGTGDRPTGG
Trigger: TCCACCCGTCGGCCTATCCCCCGTGCCCTCACCCAAGCTTTGTGGCGCACTTGGGTGGCGTGGCCGTGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR TCA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGCCACCACGCCCAGGGTaGTGCCCACGGCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTPPRPG*CPRPRH
Trigger: GTGGCGTGGCCGTGGGCATCACCCTGGGCGTGGTGG...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCCCACCACGCCCAGGGTaGTGCCCACGGCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCPPRPG*CPRPRH
Trigger: GTGGCGTGGCCGTGGGCATCACCCTGGGCGTGGTGG...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGCCTCCAGCAGGGCCTTaGTGCTTAGCCTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQPPAGP*CLACGC
Trigger: GCAACCGCAGGCTAAGCAGCAAGGCCCTGCTGGAGG...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGCAGCACACCACGGTCTaGCACCTCTCACGGATGCCC +
Preference number: 4 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQQHTTV*HLSRMP
Trigger: GGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTG...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGGAGGCCTGGGTCAGGTaGAGTGACCCTATGACCCCA +
Preference number: 4 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQEAWVR*SDPMTP
Trigger: TGGGGTCATAGGGTCACTTCACCTGACCCAGGCCTC...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GCCCAGGGTGATGCCCACGGCCACGCCACCCAAGTGCGCCACAAAGCTTGGGTGCCATCCGCAGCAGCTTaGACTGGCACTTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: AQGDAHGHATQVRHKAWVPSAAA*TGTSCL
Trigger: CAGGCATGAAGTGCCAGTTCAAGCTGCTGCGGATGG...CACCCAAGCTTTGTGGCGCACTTGGGTGGCGTGGCCGTGGGCATCACCCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR TCA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCCCACCACGCCCAGGGTaGTGCCCACGGCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLIPPRPG*CPRPRH
Trigger: GTGGCGTGGCCGTGGGCATCACCCTGGGCGTGGTGG...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCGTTCCAGCTCCTCGATaGGCTCCGCCTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCVPAPR*APPRRR
Trigger: CCTGCGCCGAGGCGGAGCGCATCGAGGAGCTGGAAC...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269051.9
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGGCTAGAGAGGGGCCATaGCTGGACGCAACAACCTTC +
Preference number: 4 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQAREGP*LDATTF
Trigger: GAAGGTTGTTGCGTCCAGGCATGGCCCCTCTCTAGC...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGTGGGGTGCTCGCCCATaGCCGAGACGGGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: QTFTLARCHQSSREKRQQWGARP*PRRGPG
Trigger: CCCCGGACCCCGTCTCGGCCATGGGCGAGCACCCCA...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR CCA 90 bp AGAGCCCACGACTGGAGCGGTCATGTCAGCCACAGACACTGCCAAGGACCCTGCAACAGGACTTTCCAGTaGTCCTCCGGCGCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: RAHDWSGHVSHRHCQGPCNRTFQ*SSGAAG
Trigger: GCCCGCGGCGCCGGAGGACCACTGGAAAGTCCTGTT...GCAGGGTCCTTGGCAGTGTCTGTGGCTGACATGACCGCTCCAGTCGTGGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGTCCCCTCCCCGACCTTaGGCCTCCAGCCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLSPPRP*ASSPQG
Trigger: CCCCTGAGGGCTGGAGGCCCAAGGTCGGGGAGGGGA...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCTCCCCTCCCCGACCTTaGGCCTCCAGCCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLSPPRP*ASSPQG
Trigger: CCCCTGAGGGCTGGAGGCCCAAGGTCGGGGAGGGGA...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGCACCCCCTGGCCCCATaGAAGAAGCCCAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTHPLAP*KKPSPG
Trigger: ACCTGGGCTGGGCTTCTTCCATGGGGCCAGGGGGTG...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAAGCTGGGCATGGAGGCTaGGGCACCCGTGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQAGHGG*GTRVRC
Trigger: GCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGC...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGTTCTGCATCCTCCCCTaGTCTTCCCTGAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQFCILP*SSLSPA
Trigger: AGCTGGGCTCAGGGAAGACCAGGGGAGGATGCAGAA...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGTCTGCCACCGGTCAGTaGTGCTCAGGGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTSATGQ*CSGAGV
Trigger: CACACCTGCCCCTGAGCATCACTGACCGGTGGCAGA...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GGCCACATGGCGGATAAGTCGCTGCGAGAGGCTCAGCCCCTTCTCCTCCAGCAGCACTGCCAAGGACCCTaGCACAACACCGGCCACGTA +
Preference number: 4 (lower is better)
Translates to: GHMADKSLREAQPLLLQQHCQGP*HNTGHV
Trigger: TACGTGGCCGGTGTTGTGGCAGGGTCCTTGGCAGTG...CTGCTGGAGGAGAAGGGGCTGAGCCTCTCGCAGCGACTTATCCGCCATGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp CTCCCTCCAGCAGGGCCATTCTGCCACCGGTCAGTGATGCTCAGGGGCAGGTGTCCTCCATGCCTTCTCTaGAGGCGCTGTCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LPPAGPFCHRSVMLRGRCPPCLL*RRCRAS
Trigger: TGAGGCACGACAGCGCCTGCAGAGAAGGCATGGAGG...ACACCTGCCCCTGAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CTCCCTCCAGCAGGGCCATTCTGCCACCGGTCAGTGATGCTCAGGGGCAGGTGTCCAGCAGGGCCATTCTaGCACCGGTCAGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: LPPAGPFCHRSVMLRGRCPAGPF*HRSVML
Trigger: GAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGG...ACACCTGCCCCTGAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GCCCAGGGTGATGCCCACGGCCACGCCACCCAAGTGCGCCACAAAGCTTGGGTGAAAAATCCACCACAGTaGCTGGTCCTGGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AQGDAHGHATQVRHKAWVKNPPQ*LVLEPL
Trigger: CAGAGGCTCCAGGACCAGTCACTGTGGTGGATTTTT...CACCCAAGCTTTGTGGCGCACTTGGGTGGCGTGGCCGTGGGCATCACCCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR TCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAAGAAGCCCAGCCCAGGTaGGGGAGGGCCACTCTCACA +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKEAQPR*GRATLT
Trigger: TGTGAGAGTGGCCCTCCCTCACCTGGGCTGGGCTTC...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CTCCCTCCAGCAGGGCCATTCTGCCACCGGTCAGTGATGCTCAGGGGCAGGTGTCAAAGAGAACCCCTCTaGCCAGACAGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPPAGPFCHRSVMLRGRCQREPL*PDSCLL
Trigger: CAGGAGGCAGCTGTCTGGTCAGAGGGGTTCTCTTTG...ACACCTGCCCCTGAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGCCAGCAGGGCCTTGCTaGTTAGCCTGCGGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMPAGPC*LACGCP
Trigger: AGGGCAACCGCAGGCTAAGCAGCAAGGCCCTGCTGG...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCCCTCCAGCAGGGCCTTaGTGCTTAGCCTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCPPAGP*CLACGC
Trigger: GCAACCGCAGGCTAAGCAGCAAGGCCCTGCTGGAGG...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGCCTCCAGCAGGGCCTTaGTGCTTAGCCTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMPPAGP*CLACGC
Trigger: GCAACCGCAGGCTAAGCAGCAAGGCCCTGCTGGAGG...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAACACTGCCAAGGACCCTaGCACAACACCGGCCACGTA +
Preference number: 4 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQHCQGP*HNTGHV
Trigger: TACGTGGCCGGTGTTGTGGCAGGGTCCTTGGCAGTG...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAATCAGCATGGCACTGGTaGAGGGGAGCAGGACCTAGG +
Preference number: 4 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQSAWHW*RGAGPR
Trigger: CCTAGGTCCTGCTCCCCTGCACCAGTGCCATGCTGA...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGATCTGCCCATCCGCGTaGCTGTCGGCAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMICPSA*LSARAR
Trigger: CCTGGCTCTTGCCGACAGCCACGCGGATGGGCAGAT...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000538145.5
CDS-3UTR CCA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGGGTTGCCCTGCAGGATaGCTTGGCGGAAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTGCPAG*LGGSCW
Trigger: CCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACC...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGCGCAGGCGCTCCCTGTaGGTGCTGCTTTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLRRRSL*VLLFPP
Trigger: GGGAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCG...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGCATACCAGACAGAGGTaGCACTCTGCTCATTCCACC +
Preference number: 4 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQHTRQR*HSAHST
Trigger: GGTGGAATGAGCAGAGTGCCACCTCTGTCTGGTATG...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAACCCTGTGGCCCCGCTTaGAAGTCATGGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQPCGPA*KSWLGE
Trigger: CTCTCCCAACCATGACTTCCAAGCGGGGCCACAGGG...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGAGCTGCCTCCTGACCTaGGGAGAGGCCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLSCLLT*GEAWVR
Trigger: CCTGACCCAGGCCTCTCCCCAGGTCAGGAGGCAGCT...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CTCCCTCCAGCAGGGCCATTCTGCCACCGGTCAGTGATGCTCAGGGGCAGGTGTGCTGGGGGAAGATCCTaGTGTGGTGAGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: LPPAGPFCHRSVMLRGRCAGGRS*CGEQQL
Trigger: GAGCTGTTGCTCACCACACCAGGATCTTCCCCCAGC...ACACCTGCCCCTGAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGGAGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCCCATCCGCAGCAGCTTaGACTGGCACTTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCPSAAA*TGTSCL
Trigger: CAGGCATGAAGTGCCAGTTCAAGCTGCTGCGGATGG...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR TCA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGGAAGCCCAGCCCAGGTaGGGGAGGGCCACTCTCACA +
Preference number: 4 (lower is better)
Translates to: QTFTLARCHQSSREKRQQEAQPR*GRATLT
Trigger: TGTGAGAGTGGCCCTCCCTCACCTGGGCTGGGCTTC...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGTGGAGGTGGGTGTGCTaGCAGAGAACAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMWRWVC*QRTAGA
Trigger: AGCCCCAGCTGTTCTCTGTCAGCACACCCACCTCCA...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTGGAGGTGGGTGTGCTaGCAGAGAACAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCWRWVC*QRTAGA
Trigger: AGCCCCAGCTGTTCTCTGTCAGCACACCCACCTCCA...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCGGTGAAGTGACCCTATaGCCCCACCCTGTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVGEVTL*PHPVAP
Trigger: CGGGGCCACAGGGTGGGGTCATAGGGTCACTTCACC...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCAGCCTGCGGTTGCCCTaGAGGATGGCTTGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLSLRLP*RMAWRK
Trigger: CTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCT...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp GGGGCAGCAGGTGTAGCTGTCATAGTACCACTTGCGGTCAATTTCCCGGGGCAGAGCCTGCGGTTGCCCTaGAGGATGGCTTGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GAAGVAVIVPLAVNFPGQSLRLP*RMAWRK
Trigger: CTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCT...CTGCCCCGGGAAATTGACCGCAAGTGGTACTATGACAGCTACACCTGCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTGCTTAGCCTGCGGTTaGCCTGCAGGATGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCCLACG*PAGWLG
Trigger: GCCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCA...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTGGCGGATAAGTCGCTaGGAGAGGCTCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCWRISR*ERLSPF
Trigger: GAAGGGGCTGAGCCTCTCGCAGCGACTTATCCGCCA...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGTGGCGGATAAGTCGCTaGGAGAGGCTCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMWRISR*ERLSPF
Trigger: GAAGGGGCTGAGCCTCTCGCAGCGACTTATCCGCCA...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAAGTAGCGCCAAACCTGTaGTCGCAGCTGTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQVAPNL*SQLWVV
Trigger: TACCACCCACAGCTGCGAGCACAGGTTTGGCGCTAC...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCACCCCCACCAGCAGCTaGAGCACCACATTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCTPTSS*STTLSP
Trigger: GGGACTCAATGTGGTGCTGCAGCTGCTGGTGGGGGT...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCCACTGCCAAGGACCCTaGCACAACACCGGCCACGTA +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCHCQGP*HNTGHV
Trigger: TACGTGGCCGGTGTTGTGGCAGGGTCCTTGGCAGTG...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp GCCTTGCTGCTTAGCCTGCGGTTGCCCTGCAGGATGGCTTGGCGGAAGCTGTTGGTCAGCCACAGACACTaGCAAGGACCCTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: ALLLSLRLPCRMAWRKLLVSHRH*QGPCHN
Trigger: GTTGTGGCAGGGTCCTTGGCAGTGTCTGTGGCTGAC...CAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCAGCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGTCCGAGGCTACTGGCTaGCCTCCCTCTGAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTSEATG*PPSEVH
Trigger: ATGAACCTCAGAGGGAGGGCAGCCAGTAGCCTCGGA...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGCAAAGGTCATCCTCATaGCCTCCATTCGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTQRSSS*PPFGAC
Trigger: GCAGGCCCCGAATGGAGGGCATGAGGATGACCTTTG...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGCCCTGCAGGATGGCTTaGCGGAAGCTGTTGGAACGC +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMPCRMA*RKLLER
Trigger: GCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGG...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGGGTTGCCCTGCAGGATaGCTTGGCGGAAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMGCPAG*LGGSCW
Trigger: CCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACC...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCGATCATGAACCAGGGTaGGGGGCAGCAGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCDHEPG*GAAGVA
Trigger: AGCTACACCTGCTGCCCCCCACCCTGGTTCATGATC...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCAGAAGAGCCCACGACTaGAGCGGTCATGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCRRAHD*SGHVSH
Trigger: GTGGCTGACATGACCGCTCCAGTCGTGGGCTCTTCT...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGCGCAGGCGCTCCCTGTaGGTGCTGCTTTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QTFTLARCHQSSREKRQQRRRSL*VLLFPP
Trigger: GGGAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCG...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCCACCCCCTGGCCCCATaGAAGAAGCCCAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLIHPLAP*KKPSPG
Trigger: ACCTGGGCTGGGCTTCTTCCATGGGGCCAGGGGGTG...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGCCCAGGAGGGCACCCTaGTTTCAGCCAGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQPRRAP*FQPGHS
Trigger: GCTGTGACCTGGCTGAAACCAGGGTGCCCTCCTGGG...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAGCTGGGCATGGAGGCTaGGGCACCCGTGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: STGSNMNDARKGFHGTQGAGHGG*GTRVRC
Trigger: GCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGC...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCACCCTAAAACAAGGCTaGGCATGGAGGCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCTLKQG*AWRLGH
Trigger: GTGCCCCAGCCTCCATGCCCAGCCTTGTTTTAGGGT...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGGATGGGAAGCCACTGTaGCCCAAGACCCCAAATGCC +
Preference number: 4 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTDGKPL*PKTPNA
Trigger: GGCATTTGGGGTCTTGGGCCACAGTGGCTTCCCATC...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGCCCTCAGCATGGCACTaGTGCAGGGGAGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQPSAWH*CRGAGP
Trigger: AGGTCCTGCTCCCCTGCACCAGTGCCATGCTGAGGG...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAACACCGCCAAAGGCGTaGGCCCACAGTGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: STGSNMNDARKGFHGTQGTPPKA*AHSATG
Trigger: GCCTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGT...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAAAGGACTTTCCAGTGCTaGCAGAGAGGGAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQRTFQC*QRGRPC
Trigger: GCATGGCCTCCCTCTCTGCCAGCACTGGAAAGTCCT...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536287.2
3UTR CAA 72 bp CTGCGGTTGCCCTGCAGGATGGCTTGGCGGAAGCTGTaGGAACGCTTGTTGCTCATCAGGCACAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LRLPCRMAWRKL*ERLLLIRHREG
Trigger: TCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR TCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGCCATCCGCAGCAGCTTaGACTGGCACTTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMPSAAA*TGTSCL
Trigger: CAGGCATGAAGTGCCAGTTCAAGCTGCTGCGGATGG...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR TCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCGATCCTTGGAGGGCTTaGGCTCTCCCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVDPWRA*ALPPAG
Trigger: CCCTGCTGGAGGGAGAGCTCAAGCCCTCCAAGGATC...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAATGGCTGCCCTCCCTCTaGGGTTCATCCATGCACCCA +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKWLPSL*GSSMHP
Trigger: TGGGTGCATGGATGAACCTCAGAGGGAGGGCAGCCA...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGAATGCCTGGCCTGACTaGCCCTGGACCCTGCTACAC +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLNAWPD*PWTLLH
Trigger: GTGTAGCAGGGTCCAGGGTCAGTCAGGCCAGGCATT...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGGAGGCCTGGGTCAGGTaGAGTGACCCTATGACCCCA +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLEAWVR*SDPMTP
Trigger: TGGGGTCATAGGGTCACTTCACCTGACCCAGGCCTC...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGCTTCCCCAGTTTCTGTaGTTCCTCTCCCGTTTAATG +
Preference number: 4 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQLPQFL*FLSRLM
Trigger: CATTAAACGGGAGAGGAATCACAGAAACTGGGGAAG...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AAGGACATTCAGCAACCACAGCACACCACGGTCTGCCACCTCTCACGGATGCCCCCTTGCTGCTTAGCCTaGGGTTGCCCTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: KDIQQPQHTTVCHLSRMPPCCLA*GCPAGW
Trigger: CCATCCTGCAGGGCAACCGCAGGCTAAGCAGCAAGG...GGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTGTGGTTGCTGAATGTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCCCTTGCTGCTTAGCCTaGGGTTGCCCTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLPCCLA*GCPAGW
Trigger: CCATCCTGCAGGGCAACCGCAGGCTAAGCAGCAAGG...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp GCTGTTGGAACGCTTGTTGCTCATCAGGCACAGGGAGGGATACGGTGGTGCTCACCAGCAGGGCCTTGCTaGTTAGCCTGCGGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: AVGTLVAHQAQGGIRWCSPAGPC*LACGCP
Trigger: AGGGCAACCGCAGGCTAAGCAGCAAGGCCCTGCTGG...TGAGCACCACCGTATCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGACCCCCACCAGCAGCTaGAGCACCACATTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLTPTSS*STTLSP
Trigger: GGGACTCAATGTGGTGCTGCAGCTGCTGGTGGGGGT...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GGGGCAGCAGGTGTAGCTGTCATAGTACCACTTGCGGTCAATTTCCCGGGGCAGACCCCCACCAGCAGCTaGAGCACCACATTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: GAAGVAVIVPLAVNFPGQTPTSS*STTLSP
Trigger: GGGACTCAATGTGGTGCTGCAGCTGCTGGTGGGGGT...CTGCCCCGGGAAATTGACCGCAAGTGGTACTATGACAGCTACACCTGCTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCATTCGGGTGGCTCCATaGACCATCTCCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLIRVAP*TISRGT
Trigger: GGTGCCCCTGGAGATGGTGCATGGAGCCACCCGAAT...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAACACTGCCAAGGACCCTaGCACAACACCGGCCACGTA +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKHCQGP*HNTGHV
Trigger: TACGTGGCCGGTGTTGTGGCAGGGTCCTTGGCAGTG...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAAGGAGGAAGAAGCTGCTaGTCAATCCGCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQGGRSC*SIRSSE
Trigger: CTCACTGCTGCGGATTGAGCAGCAGCTTCTTCCTCC...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCCCCCTGCATCCTCCATaGCTTCTCTGCAGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLPLHPP*LLCRRC
Trigger: ACAGCGCCTGCAGAGAAGGCATGGAGGATGCAGGGG...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGACAGCACACCACGGTCTaGCACCTCTCACGGATGCCC +
Preference number: 4 (lower is better)
Translates to: STGSNMNDARKGFHGTQGQHTTV*HLSRMP
Trigger: GGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTG...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AAGGACATTCAGCAACCACAGCACACCACGGTCTGCCACCTCTCACGGATGCCCCCAGCAGGGCCATTCTaGCACCGGTCAGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: KDIQQPQHTTVCHLSRMPPAGPF*HRSVML
Trigger: GAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGG...GGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTGTGGTTGCTGAATGTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCAGCAGTGGGCCAAGATaGGGTATGGCTGGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVSSGPR*GMAGPR
Trigger: GCGAGGCCCAGCCATACCGCATCTTGGCCCACTGCT...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGTCAGCATGGCACTGGTaGAGGGGAGCAGGACCTAGG +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLSAWHW*RGAGPR
Trigger: CCTAGGTCCTGCTCCCCTGCACCAGTGCCATGCTGA...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAGGCAGAGGAGAACCGTaGTTTCCAGCCAGCACGGGG +
Preference number: 4 (lower is better)
Translates to: STGSNMNDARKGFHGTQGGRGEP*FPASTG
Trigger: CCCCGTGCTGGCTGGAAAGCACGGTTCTCCTCTGCC...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGTCCAGCTTGGAGCTGTaGCTCTCCAGAAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMSSLEL*LSRRLR
Trigger: CCGGAGTCTTCTGGAGAGCCACAGCTCCAAGCTGGA...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000538145.5
CDS-3UTR CCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGCCCTGCAGGATGGCTTaGCGGAAGCTGTTGGAACGC +
Preference number: 4 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQPCRMA*RKLLER
Trigger: GCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGG...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGGATCATGAACCAGGGTaGGGGGCAGCAGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMDHEPG*GAAGVA
Trigger: AGCTACACCTGCTGCCCCCCACCCTGGTTCATGATC...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp CAGGGTCTCATAGGCCACATGGCGGATAAGTCGCTGCGAGAGGCTCAGCCCCTTGATCATGAACCAGGGTaGGGGGCAGCAGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: QGLIGHMADKSLREAQPLDHEPG*GAAGVA
Trigger: AGCTACACCTGCTGCCCCCCACCCTGGTTCATGATC...AAGGGGCTGAGCCTCTCGCAGCGACTTATCCGCCATGTGGCCTATGAGACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CCA 90 bp GCCTTGCTGCTTAGCCTGCGGTTGCCCTGCAGGATGGCTTGGCGGAAGCTGTTGCAAGCCCAATTCGGGTaGCTCCATGCACCATCTCCA +
Preference number: 4 (lower is better)
Translates to: ALLLSLRLPCRMAWRKLLQAQFG*LHAPSP
Trigger: TGGAGATGGTGCATGGAGCCACCCGAATTGGGCTTG...CAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCAGCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGAGAAGAGCCCACGACTaGAGCGGTCATGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMRRAHD*SGHVSH
Trigger: GTGGCTGACATGACCGCTCCAGTCGTGGGCTCTTCT...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTTCCCCTCCCCGACCTTaGGCCTCCAGCCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RGAGPRELHMWMRPGQSISPPRP*ASSPQG
Trigger: CCCCTGAGGGCTGGAGGCCCAAGGTCGGGGAGGGGA...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AAGGACATTCAGCAACCACAGCACACCACGGTCTGCCACCTCTCACGGATGCCCGAGAGGGGCCATGCCTaGACGCAACAACCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: KDIQQPQHTTVCHLSRMPERGHA*TQQPSS
Trigger: GCTCGAAGGTTGTTGCGTCCAGGCATGGCCCCTCTC...GGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTGTGGTTGCTGAATGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AAGGACATTCAGCAACCACAGCACACCACGGTCTGCCACCTCTCACGGATGCCCGGATGGGCACCAGGCTaGAGGAAGACCGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: KDIQQPQHTTVCHLSRMPGWAPG*RKTVPT
Trigger: TGTGGGAACGGTCTTCCTCCAGCCTGGTGCCCATCC...GGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTGTGGTTGCTGAATGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAAAAGATGCGGTATGGCTaGGCCTCGCCTGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKKMRYG*ASPASE
Trigger: CTCACTGGCAGGCGAGGCCCAGCCATACCGCATCTT...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp ACATGTCCAGTAGGCCCTCTTCTTACTGGAGCCCCAGACACAGCAGGTGTCAAGCTGCGGCCCTCAGCATaGCACTGGTGCAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: TCPVGPLLTGAPDTAGVKLRPSA*HWCRGA
Trigger: TGCTCCCCTGCACCAGTGCCATGCTGAGGGCCGCAG...CTTGACACCTGCTGTGTCTGGGGCTCCAGTAAGAAGAGGGCCTACTGGACATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAAGCCAGGACAGGAATCTaGAGGGGATTCTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQARTGI*RGFSIP
Trigger: AGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTATGACCCCACCCTGTaGCCCCGCTTGGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCYDPTL*PRLEVM
Trigger: CATGACTTCCAAGCGGGGCCACAGGGTGGGGTCATA...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp ACATGTCCAGTAGGCCCTCTTCTTACTGGAGCCCCAGACACAGCAGGTGTCAAGAGCTGCCTCCTGACCTaGGGAGAGGCCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TCPVGPLLTGAPDTAGVKSCLLT*GEAWVR
Trigger: CCTGACCCAGGCCTCTCCCCAGGTCAGGAGGCAGCT...CTTGACACCTGCTGTGTCTGGGGCTCCAGTAAGAAGAGGGCCTACTGGACATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCCTGCTGAGAGGGTGGTaGGACCTGCTGAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCLLRGW*DLLRRK
Trigger: CTTTCTCCTCAGCAGGTCCCACCACCCTCTCAGCAG...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGGGCCAGCCTTGGCCATaGGGAAGTGCTGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: QTFTLARCHQSSREKRQQGQPWP*GSAAER
Trigger: CCTCTCAGCAGCACTTCCCCATGGCCAAGGCTGGCC...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCGGACACGGCCAGCCTTaGCCATGGGGAAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVGHGQP*PWGSAA
Trigger: AGCAGCACTTCCCCATGGCCAAGGCTGGCCGTGTCC...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CAA 72 bp CCCTGCAGGATGGCTTGGCGGAAGCTGTTGGAACGCTaGTTGCTCATCAGGCACAGGGAGGGATACGGTGGT +
Preference number: 4 (lower is better)
Translates to: PCRMAWRKLLER*LLIRHREGYGG
Trigger: ACCACCGTATCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR TCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCAAAAATCCACCACAGTaGCTGGTCCTGGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCKNPPQ*LVLEPL
Trigger: CAGAGGCTCCAGGACCAGTCACTGTGGTGGATTTTT...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR TCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTCTGCCCGGCCTAGCTaGGCTGGTGATGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCSARPS*AGDEKK
Trigger: TTTCTTCTCATCACCAGCTCAGCTAGGCCGGGCAGA...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR TCA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAAGCCTGCAATTATTTCTaGGCTAGAGAGGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQACNYF*AREGPC
Trigger: GCATGGCCCCTCTCTAGCTCAGAAATAATTGCAGGC...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAAAGGGAGGGAGAAGTCTaGAGCTGGTCCTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKREGEV*SWSWVC
Trigger: ACAGACCCAGGACCAGCTTCAGACTTCTCCCTCCCT...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCAGGGAGGGAGAAGTCTaGAGCTGGTCCTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLREGEV*SWSWVC
Trigger: ACAGACCCAGGACCAGCTTCAGACTTCTCCCTCCCT...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AAGGACATTCAGCAACCACAGCACACCACGGTCTGCCACCTCTCACGGATGCCCGCTGGGGCACCCGTGTaGGATGCCAATATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KDIQQPQHTTVCHLSRMPAGAPV*DANILE
Trigger: TTCCAGGATATTGGCATCTCACACGGGTGCCCCAGC...GGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTGTGGTTGCTGAATGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCTGGCTGCCCTCCCTCTaGGGTTCATCCATGCACCCA +
Preference number: 4 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLIWLPSL*GSSMHP
Trigger: TGGGTGCATGGATGAACCTCAGAGGGAGGGCAGCCA...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCAGGACCTCCCTTTTGTaGGGGTCCAGCTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLRTSLL*GSSLEL
Trigger: CAGCTCCAAGCTGGACCCGCACAAAAGGGAGGTCCT...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000538145.5
CDS-3UTR GCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGATGCTTAGCCTGCGGTTaGCCTGCAGGATGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: STGSNMNDARKGFHGTQGCLACG*PAGWLG
Trigger: GCCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCA...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CAATGTTGGCCAGATGGGCAGAGACGAGAGCATACACCCCTCCAGAAGAGCCCATGCTTAGCCTGCGGTTaGCCTGCAGGATGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: QCWPDGQRREHTPLQKSPCLACG*PAGWLG
Trigger: GCCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCA...TGGGCTCTTCTGGAGGGGTGTATGCTCTCGTCTCTGCCCATCTGGCCAACATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCGTAGCGCCAAACCTGTaGTCGCAGCTGTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLVAPNL*SQLWVV
Trigger: TACCACCCACAGCTGCGAGCACAGGTTTGGCGCTAC...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGGTCAGCCACAGACACTaGCAAGGACCCTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLVSHRH*QGPCHN
Trigger: GTTGTGGCAGGGTCCTTGGCAGTGTCTGTGGCTGAC...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCGTCAGCCACAGACACTaGCAAGGACCCTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLVSHRH*QGPCHN
Trigger: GTTGTGGCAGGGTCCTTGGCAGTGTCTGTGGCTGAC...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCCAGATCATGCCCCGGTaGACACCAACCAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVQIMPR*TPTSPG
Trigger: TCCTGGGCTGGTTGGTGTGCACCGGGGCATGATCTG...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAAGAAGTTTATTCCCCCTaGATGGGTCCCTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQEVYSP*MGPSHW
Trigger: CCAGTGAGAGGGACCCATGCAGGGGGAATAAACTTC...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCCCTCCATGCCTTCTCTaGAGGCGCTGTCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLIPPCLL*RRCRAS
Trigger: TGAGGCACGACAGCGCCTGCAGAGAAGGCATGGAGG...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGACCCCTGCATCCTCCATaGCTTCTCTGCAGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: STGSNMNDARKGFHGTQGPLHPP*LLCRRC
Trigger: ACAGCGCCTGCAGAGAAGGCATGGAGGATGCAGGGG...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGACTGACCCTGGACCCTaGTACACTCAAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLTDPGP*YTQGPG
Trigger: TCCTGGCCCTTGAGTGTAGCAGGGTCCAGGGTCAGT...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp ACATGTCCAGTAGGCCCTCTTCTTACTGGAGCCCCAGACACAGCAGGTGTCAAGAGCAGTGGGCCAAGATaGGGTATGGCTGGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: TCPVGPLLTGAPDTAGVKSSGPR*GMAGPR
Trigger: GCGAGGCCCAGCCATACCGCATCTTGGCCCACTGCT...CTTGACACCTGCTGTGTCTGGGGCTCCAGTAAGAAGAGGGCCTACTGGACATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGTGTCCTGACTCCTTCTaGATCCTCCCCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMCPDSF*ILPWSS
Trigger: GGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACA...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCACAGAGGTGGCACTCTaGTCATTCCACCCACACCAC +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCTEVAL*SFHPHH
Trigger: GTGGTGTGGGTGGAATGAGCAGAGTGCCACCTCTGT...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGTGTGCGGGTCCAGCTTaGAGCTGTGGCTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLCAGPA*SCGSPE
Trigger: TTCTGGAGAGCCACAGCTCCAAGCTGGACCCGCACA...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR CCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCTGTGCGGGTCCAGCTTaGAGCTGTGGCTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLCAGPA*SCGSPE
Trigger: TTCTGGAGAGCCACAGCTCCAAGCTGGACCCGCACA...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000538145.5
CDS-3UTR CCA 90 bp CTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGCCACATCAACTCATCTGCCCATCCGCGTaGCTGTCGGCAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LARCHQSSREKRQQPHQLICPSA*LSARAR
Trigger: CCTGGCTCTTGCCGACAGCCACGCGGATGGGCAGAT...GAGTTGATGTGGCTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR CCA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCGGTTGCCCTGCAGGATaGCTTGGCGGAAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLIGCPAG*LGGSCW
Trigger: CCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACC...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGATCATGAACCAGGGTaGGGGGCAGCAGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQDHEPG*GAAGVA
Trigger: AGCTACACCTGCTGCCCCCCACCCTGGTTCATGATC...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCAGAAGAGCCCACGACTaGAGCGGTCATGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLRRAHD*SGHVSH
Trigger: GTGGCTGACATGACCGCTCCAGTCGTGGGCTCTTCT...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGCGCAGCAGCTTGAACTaGCACTTCATGCCTGACCAG +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMRSSLN*HFMPDQ
Trigger: CTGGTCAGGCATGAAGTGCCAGTTCAAGCTGCTGCG...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAAAGGCCCTCTTCTTACTaGAGCCCCAGACACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKRPSSY*SPRHSR
Trigger: CCTGCTGTGTCTGGGGCTCCAGTAAGAAGAGGGCCT...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCTCACGGATGCCCACATaGGCCCCCTGCATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVSRMPT*APCILH
Trigger: ATGGAGGATGCAGGGGGCCCATGTGGGCATCCGTGA...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CAGCCTCTCTTGCGCCCCCAAAGCTCTTTCTCTCCTAAGGGAGATAGGATGGAAACACCGCCAAAGGCGTaGGCCCACAGTGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: QPLLRPQSSFSPKGDRMETPPKA*AHSATG
Trigger: GCCTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGT...TTCCATCCTATCTCCCTTAGGAGAGAAAGAGCTTTGGGGGCGCAAGAGAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAATTCTGCATCCTCCCCTaGTCTTCCCTGAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKFCILP*SSLSPA
Trigger: AGCTGGGCTCAGGGAAGACCAGGGGAGGATGCAGAA...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAAAGTAACAAGCTTCCCTaGGAGTCCCCGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKSNKLP*ESPREL
Trigger: CAGCTCCCTCGGGGACTCCCAGGGAAGCTTGTTACT...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAAGCTGGGGGAAGATCCTaGTGTGGTGAGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKAGGRS*CGEQQL
Trigger: GAGCTGTTGCTCACCACACCAGGATCTTCCCCCAGC...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGTCTGCCCGGCCTAGCTaGGCTGGTGATGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQSARPS*AGDEKK
Trigger: TTTCTTCTCATCACCAGCTCAGCTAGGCCGGGCAGA...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCTCTGCCCGGCCTAGCTaGGCTGGTGATGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLSARPS*AGDEKK
Trigger: TTTCTTCTCATCACCAGCTCAGCTAGGCCGGGCAGA...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR TCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCCTGCCAGTGAGTGAGTaGGCCCATTTACATGTAGTC +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCLPVSE*AHLHVV
Trigger: GACTACATGTAAATGGGCTCACTCACTCACTGGCAG...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCCAAAGAGAACCCCTCTaGCCAGACAGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLIQREPL*PDSCLL
Trigger: CAGGAGGCAGCTGTCTGGTCAGAGGGGTTCTCTTTG...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCAGGACCTCCCTTTTGTaGGGGTCCAGCTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLIRTSLL*GSSLEL
Trigger: CAGCTCCAAGCTGGACCCGCACAAAAGGGAGGTCCT...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR GCA 90 bp CTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGCCACATCAACTCCCTTGCTGCTTAGCCTaGGGTTGCCCTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LARCHQSSREKRQQPHQLPCCLA*GCPAGW
Trigger: CCATCCTGCAGGGCAACCGCAGGCTAAGCAGCAAGG...GAGTTGATGTGGCTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp ACATGTCCAGTAGGCCCTCTTCTTACTGGAGCCCCAGACACAGCAGGTGTCAAGTGGCGGATAAGTCGCTaGGAGAGGCTCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: TCPVGPLLTGAPDTAGVKWRISR*ERLSPF
Trigger: GAAGGGGCTGAGCCTCTCGCAGCGACTTATCCGCCA...CTTGACACCTGCTGTGTCTGGGGCTCCAGTAAGAAGAGGGCCTACTGGACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGTCATAGTACCACTTaGGGTCAATTTCCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCCHSTT*GQFPGA
Trigger: TGCCCCGGGAAATTGACCGCAAGTGGTACTATGACA...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCGTAGCGCCAAACCTGTaGTCGCAGCTGTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVVAPNL*SQLWVV
Trigger: TACCACCCACAGCTGCGAGCACAGGTTTGGCGCTAC...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CAATGTTGGCCAGATGGGCAGAGACGAGAGCATACACCCCTCCAGAAGAGCCCAGTAGCGCCAAACCTGTaGTCGCAGCTGTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: QCWPDGQRREHTPLQKSPVAPNL*SQLWVV
Trigger: TACCACCCACAGCTGCGAGCACAGGTTTGGCGCTAC...TGGGCTCTTCTGGAGGGGTGTATGCTCTCGTCTCTGCCCATCTGGCCAACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGGCTAGAGAGGGGCCATaGCTGGACGCAACAACCTTC +
Preference number: 4 (lower is better)
Translates to: QTFTLARCHQSSREKRQQAREGP*LDATTF
Trigger: GAAGGTTGTTGCGTCCAGGCATGGCCCCTCTCTAGC...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCCAAAGGTCATCCTCATaGCCTCCATTCGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVQRSSS*PPFGAC
Trigger: GCAGGCCCCGAATGGAGGGCATGAGGATGACCTTTG...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGACAGAGGTGGCACTCTaGTCATTCCACCCACACCAC +
Preference number: 4 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQTEVAL*SFHPHH
Trigger: GTGGTGTGGGTGGAATGAGCAGAGTGCCACCTCTGT...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCCCCGAGGGAGCTGAGTaGTTCTATGAGGGATTTCTA +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCPEGAE*FYEGFL
Trigger: TAGAAATCCCTCATAGAAGCACTCAGCTCCCTCGGG...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTAACAGGACTTTCCAGTaGTCCTCCGGCGCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: RGAGPRELHMWMRPGQSINRTFQ*SSGAAG
Trigger: GCCCGCGGCGCCGGAGGACCACTGGAAAGTCCTGTT...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR CCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCCAAGCCCAATTCGGGTaGCTCCATGCACCATCTCCA +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLQAQFG*LHAPSP
Trigger: TGGAGATGGTGCATGGAGCCACCCGAATTGGGCTTG...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCAGGCCCTCTTCTTACTaGAGCCCCAGACACAGCAGG +
Preference number: 4 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLIRPSSY*SPRHSR
Trigger: CCTGCTGTGTCTGGGGCTCCAGTAAGAAGAGGGCCT...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAAACACACTTAACATGGTaGGAGACACGATTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQTHLTW*ETRFRL
Trigger: GAGGCGGAATCGTGTCTCCCACCATGTTAAGTGTGT...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCCTGCTGAGAGGGTGGTaGGACCTGCTGAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLILLRGW*DLLRRK
Trigger: CTTTCTCCTCAGCAGGTCCCACCACCCTCTCAGCAG...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCAGGCCAGCCTTGGCCATaGGGAAGTGCTGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPGQPWP*GSAAER
Trigger: CCTCTCAGCAGCACTTCCCCATGGCCAAGGCTGGCC...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGAGTTTCTGTATCCTGTaGATAAAAGGCCAACCTACC +
Preference number: 4 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQSFCIL*IKGQPT
Trigger: GGTAGGTTGGCCTTTTATCCACAGGATACAGAAACT...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTCTATGGCTGCTGTTTaGGGATTCCCCAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCSMAAV*GFPSFQ
Trigger: CTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGA...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCGCTCCCCTAATCCTCTaGGCAAGAATGGTTCTCATG +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCAPLIL*ARMVLM
Trigger: CATGAGAACCATTCTTGCCCAGAGGATTAGGGGAGC...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CAA 72 bp GCTGGGGCTGGTGGTCTAAGGTGTAGACGAGGGTCCTaGGCAGCAGAGGACACACTTAACATGGTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: AGAGGLRCRRGS*AAEDTLNMVGD
Trigger: GTCTCCCACCATGTTAAGTGTGTCCTCTGCTGCCAAGGACCCTCGTCTACACCTTAGACCACCAGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
3UTR CAA 72 bp TGCAGGATGGCTTGGCGGAAGCTGTTGGAACGCTTGTaGCTCATCAGGCACAGGGAGGGATACGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CRMAWRKLLERL*LIRHREGYGGA
Trigger: AGCACCACCGTATCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR TCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCACCTGCAGTACAAATTaGCCTAGTGACACCCCATTG +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCTCSTN*PSDTPL
Trigger: CAATGGGGTGTCACTAGGTCAATTTGTACTGCAGGT...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR TCA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGCTATCCCTGCATGCATaGAGATGTATGTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTLSLHA*RCMSGS
Trigger: GCTACCTGACATACATCTTCATGCATGCAGGGATAG...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCCTATCCCTGCATGCATaGAGATGTATGTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCLSLHA*RCMSGS
Trigger: GCTACCTGACATACATCTTCATGCATGCAGGGATAG...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR TCA 90 bp AGAGCCCACGACTGGAGCGGTCATGTCAGCCACAGACACTGCCAAGGACCCTGCCTATCCCTGCATGCATaGAGATGTATGTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: RAHDWSGHVSHRHCQGPCLSLHA*RCMSGS
Trigger: GCTACCTGACATACATCTTCATGCATGCAGGGATAG...GCAGGGTCCTTGGCAGTGTCTGTGGCTGACATGACCGCTCCAGTCGTGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR TCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCCTGGCACTTCATGCCTaGCCAGTTCATGACAATGTT +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCLALHA*PVHDNV
Trigger: AACATTGTCATGAACTGGTCAGGCATGAAGTGCCAG...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR TCA 90 bp CTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGCCACATCAACTCCCATCCGCAGCAGCTTaGACTGGCACTTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: LARCHQSSREKRQQPHQLPSAAA*TGTSCL
Trigger: CAGGCATGAAGTGCCAGTTCAAGCTGCTGCGGATGG...GAGTTGATGTGGCTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCAAAAATCCACCACAGTaGCTGGTCCTGGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLKNPPQ*LVLEPL
Trigger: CAGAGGCTCCAGGACCAGTCACTGTGGTGGATTTTT...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR TCA 90 bp CTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGCCACATCAACTCGCTGGGGCACCCGTGTaGGATGCCAATATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LARCHQSSREKRQQPHQLAGAPV*DANILE
Trigger: TTCCAGGATATTGGCATCTCACACGGGTGCCCCAGC...GAGTTGATGTGGCTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGGACGGAAACAAGAGCTaGACCTGGCAAACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLDGNKS*TWQTSA
Trigger: TGCTGAGGTTTGCCAGGTTCAGCTCTTGTTTCCGTC...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTCAAGACGCCCCAGGCTaGCGCAACACCGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGQDAPG*RNTAKG
Trigger: GCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCTTG...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCCCTCCTCTGAGGCACTaGCTTCCATCTACATCTTTC +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCPPLRH*LPSTSF
Trigger: GAAAGATGTAGATGGAAGTCAGTGCCTCAGAGGAGG...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGACTACCTCCACCAGCCTaGAGATTTACACACCACCCC +
Preference number: 4 (lower is better)
Translates to: STGSNMNDARKGFHGTQGLPPPA*RFTHHP
Trigger: GGGGTGGTGTGTAAATCTTCAGGCTGGTGGAGGTAG...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAAAAGATCCTGGTGTGGTaGGCAACAGCTCCCCTAATC +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKKILVW*ATAPLI
Trigger: GATTAGGGGAGCTGTTGCTCACCACACCAGGATCTT...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGAAGATCCTGGTGTGGTaGGCAACAGCTCCCCTAATC +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLKILVW*ATAPLI
Trigger: GATTAGGGGAGCTGTTGCTCACCACACCAGGATCTT...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGAATCACAGTTCAGAGTaGTGGTTGCTGTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMNHSSE*WLLWEH
Trigger: GTGCTCCCACAGCAACCATCACTCTGAACTGTGATT...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCATGCTTAGCCTGCGGTTaGCCTGCAGGATGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPCLACG*PAGWLG
Trigger: GCCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCA...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTCCAGCAGGGCCTTGCTaGTTAGCCTGCGGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: RGAGPRELHMWMRPGQSIPAGPC*LACGCP
Trigger: AGGGCAACCGCAGGCTAAGCAGCAAGGCCCTGCTGG...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGTGTCATAGTACCACTTaGGGTCAATTTCCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMCHSTT*GQFPGA
Trigger: TGCCCCGGGAAATTGACCGCAAGTGGTACTATGACA...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCAACCCCCACCAGCAGCTaGAGCACCACATTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPTPTSS*STTLSP
Trigger: GGGACTCAATGTGGTGCTGCAGCTGCTGGTGGGGGT...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAGGAGGAGGAAGAAGCTaGTGCTCAATCCGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: STGSNMNDARKGFHGTQGGGGRS*CSIRSS
Trigger: ACTGCTGCGGATTGAGCAGCAGCTTCTTCCTCCTCC...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTAGCCTACAGGCTCCCTaGTCTGCCCAACCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RGAGPRELHMWMRPGQSISLQAP*SAQPRH
Trigger: GTGCCTGGGTTGGGCAGAGCAGGGAGCCTGTAGGCT...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGCTGCAGGCGCTGTCGTaGCTCAGTTACCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: QTFTLARCHQSSREKRQQLQALS*LSYLSH
Trigger: ATGGGAAAGGTAACTGAGGCACGACAGCGCCTGCAG...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp ACACTTAACATGGTGGGAGACACGATTCCGCCTCCACTGTCCTTCTCAGTAACAGCCACCTCTCACGGATaGCCACATGGGCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: TLNMVGDTIPPPLSFSVTATSHG*PHGPPA
Trigger: TGCAGGGGGCCCATGTGGGCATCCGTGAGAGGTGGC...TGTTACTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp ACATGTCCAGTAGGCCCTCTTCTTACTGGAGCCCCAGACACAGCAGGTGTCAAGTCCAGCTTGGAGCTGTaGCTCTCCAGAAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: TCPVGPLLTGAPDTAGVKSSLEL*LSRRLR
Trigger: CCGGAGTCTTCTGGAGAGCCACAGCTCCAAGCTGGA...CTTGACACCTGCTGTGTCTGGGGCTCCAGTAAGAAGAGGGCCTACTGGACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR CCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGACAATGTTGGCCAGATaGGCAGAGACGAGAGCATAC +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMTMLAR*AETRAY
Trigger: GTATGCTCTCGTCTCTGCCCATCTGGCCAACATTGT...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCCGAAGACGGTGTACATaGCCACAAAAATCCACCACA +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCRRRCT*PQKSTT
Trigger: TGTGGTGGATTTTTGTGGCCATGTACACCGTCTTCG...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCAGAGAGGGGCCATGCCTaGACGCAACAACCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPERGHA*TQQPSS
Trigger: GCTCGAAGGTTGTTGCGTCCAGGCATGGCCCCTCTC...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CAGCCTCTCTTGCGCCCCCAAAGCTCTTTCTCTCCTAAGGGAGATAGGATGGAAAAGATGCGGTATGGCTaGGCCTCGCCTGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QPLLRPQSSFSPKGDRMEKMRYG*ASPASE
Trigger: CTCACTGGCAGGCGAGGCCCAGCCATACCGCATCTT...TTCCATCCTATCTCCCTTAGGAGAGAAAGAGCTTTGGGGGCGCAAGAGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCGGCCAAGATGCGGTATaGCTGGGCCTCGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MMPGKAFTAPRESALRICGQDAV*LGLACQ
Trigger: CTGGCAGGCGAGGCCCAGCCATACCGCATCTTGGCC...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAAAGGGAACTACATATGTaGATGAGGCCAGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQRELHM*MRPGQS
Trigger: AGATTGCCCTGGCCTCATCCACATATGTAGTTCCCT...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCGCCAGGACAGGAATCTaGAGGGGATTCTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVARTGI*RGFSIP
Trigger: AGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGGTAGACGAGGGTCCTTaGCAGCAGAGGACACACTTA +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLVDEGP*QQRTHL
Trigger: TAAGTGTGTCCTCTGCTGCCAAGGACCCTCGTCTAC...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGCTTGGAAGTCATGGTTaGGAGAGGGGATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QTFTLARCHQSSREKRQQLGSHG*ERGWRW
Trigger: CCACCTCCATCCCCTCTCCCAACCATGACTTCCAAG...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGCACCACCCCCTGGGCTaGCAGCCACCTCAGACAAGG +
Preference number: 4 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVHHPLG*QPPQTR
Trigger: CCTTGTCTGAGGTGGCTGCCAGCCCAGGGGGTGGTG...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CAGCCTCTCTTGCGCCCCCAAAGCTCTTTCTCTCCTAAGGGAGATAGGATGGAATTACACACCACCCCCTaGGCTGGCAGCCACCTCAGA +
Preference number: 4 (lower is better)
Translates to: QPLLRPQSSFSPKGDRMELHTTP*AGSHLR
Trigger: TCTGAGGTGGCTGCCAGCCCAGGGGGTGGTGTGTAA...TTCCATCCTATCTCCCTTAGGAGAGAAAGAGCTTTGGGGGCGCAAGAGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCGAGCCAGTGAGTCTATaGCTGCTGTTTGGGGATTCC +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLEPVSL*LLFGDS
Trigger: GGAATCCCCAAACAGCAGCCATAGACTCACTGGCTC...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCGGGGCAGTTCACTGTTaGGCACTGTTTTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCGAVHC*ALFLRQ
Trigger: CTGCCTTAAAAACAGTGCCCAACAGTGAACTGCCCC...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCCTGGCACTTCATGCCTaGCCAGTTCATGACAATGTT +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCLALHA*PVHDNV
Trigger: AACATTGTCATGAACTGGTCAGGCATGAAGTGCCAG...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR TCA 90 bp TTACCTGCAGTACAAATTGACCTAGTGACACCCCATTGTAGAGGAAAAAGGCAACCACCACGCCCAGGGTaGTGCCCACGGCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: LPAVQIDLVTPHCRGKRQPPRPG*CPRPRH
Trigger: GTGGCGTGGCCGTGGGCATCACCCTGGGCGTGGTGG...TTGCCTTTTTCCTCTACAATGGGGTGTCACTAGGTCAATTTGTACTGCAGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR TCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTTCTGCCACCGGTCAGTaGTGCTCAGGGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGSATGQ*CSGAGV
Trigger: CACACCTGCCCCTGAGCATCACTGACCGGTGGCAGA...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp ACACTTAACATGGTGGGAGACACGATTCCGCCTCCACTGTCCTTCTCAGTAACAGATCCTTGGAGGGCTTaGGCTCTCCCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TLNMVGDTIPPPLSFSVTDPWRA*ALPPAG
Trigger: CCCTGCTGGAGGGAGAGCTCAAGCCCTCCAAGGATC...TGTTACTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCCTGCCAGTGAGTGAGTaGGCCCATTTACATGTAGTC +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLLPVSE*AHLHVV
Trigger: GACTACATGTAAATGGGCTCACTCACTCACTGGCAG...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCTCGCCTGCCAGTGAGTaGGTGAGCCCATTTACATGT +
Preference number: 4 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVSPASE*VSPFTC
Trigger: ACATGTAAATGGGCTCACTCACTCACTGGCAGGCGA...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGTCGCCTGCCAGTGAGTaGGTGAGCCCATTTACATGT +
Preference number: 4 (lower is better)
Translates to: QTFTLARCHQSSREKRQQSPASE*VSPFTC
Trigger: ACATGTAAATGGGCTCACTCACTCACTGGCAGGCGA...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CAGCCTCTCTTGCGCCCCCAAAGCTCTTTCTCTCCTAAGGGAGATAGGATGGAAGAGGCAGCAATGTCCTaGCTCCTTCTGCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: QPLLRPQSSFSPKGDRMEEAAMS*LLLHPP
Trigger: GGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTC...TTCCATCCTATCTCCCTTAGGAGAGAAAGAGCTTTGGGGGCGCAAGAGAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCAGCCTGCGGTTGCCCTaGAGGATGGCTTGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: MMPGKAFTAPRESALRICSLRLP*RMAWRK
Trigger: CTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCT...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTCCTCCAGCAGGGCCTTaGTGCTTAGCCTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGPPAGP*CLACGC
Trigger: GCAACCGCAGGCTAAGCAGCAAGGCCCTGCTGGAGG...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GGGGCAGCAGGTGTAGCTGTCATAGTACCACTTGCGGTCAATTTCCCGGGGCAGTGTCATAGTACCACTTaGGGTCAATTTCCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: GAAGVAVIVPLAVNFPGQCHSTT*GQFPGA
Trigger: TGCCCCGGGAAATTGACCGCAAGTGGTACTATGACA...CTGCCCCGGGAAATTGACCGCAAGTGGTACTATGACAGCTACACCTGCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCAGTCAGCCACAGACACTaGCAAGGACCCTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPVSHRH*QGPCHN
Trigger: GTTGTGGCAGGGTCCTTGGCAGTGTCTGTGGCTGAC...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTAGCCTACAGGCTCCCTaGTCTGCCCAACCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGSLQAP*SAQPRH
Trigger: GTGCCTGGGTTGGGCAGAGCAGGGAGCCTGTAGGCT...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGGAAGTTTATTCCCCCTaGATGGGTCCCTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: QTFTLARCHQSSREKRQQEVYSP*MGPSHW
Trigger: CCAGTGAGAGGGACCCATGCAGGGGGAATAAACTTC...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAACCCGAGGGAGCTGAGTaGTTCTATGAGGGATTTCTA +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKPEGAE*FYEGFL
Trigger: TAGAAATCCCTCATAGAAGCACTCAGCTCCCTCGGG...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCCTTGGCGGAAGCTGTTaGAACGCTTGTTGCTCATTA +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCLGGSC*NACCSL
Trigger: TAATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAG...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000538145.5
CDS-3UTR CCA 90 bp AAGGACATTCAGCAACCACAGCACACCACGGTCTGCCACCTCTCACGGATGCCCACAATGTTGGCCAGATaGGCAGAGACGAGAGCATAC +
Preference number: 4 (lower is better)
Translates to: KDIQQPQHTTVCHLSRMPTMLAR*AETRAY
Trigger: GTATGCTCTCGTCTCTGCCCATCTGGCCAACATTGT...GGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTGTGGTTGCTGAATGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCACAATGTTGGCCAGATaGGCAGAGACGAGAGCATAC +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLTMLAR*AETRAY
Trigger: GTATGCTCTCGTCTCTGCCCATCTGGCCAACATTGT...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp CAGGGTCTCATAGGCCACATGGCGGATAAGTCGCTGCGAGAGGCTCAGCCCCTTCGAAGACGGTGTACATaGCCACAAAAATCCACCACA +
Preference number: 4 (lower is better)
Translates to: QGLIGHMADKSLREAQPLRRRCT*PQKSTT
Trigger: TGTGGTGGATTTTTGTGGCCATGTACACCGTCTTCG...AAGGGGCTGAGCCTCTCGCAGCGACTTATCCGCCATGTGGCCTATGAGACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CCA 90 bp ATTGAGTCCCAGGTGTTCTATCCCTGCATGCATGAAGATGTATGTCAGGTAGCGCGCAGGCGCTCCCTGTaGGTGCTGCTTTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: IESQVFYPCMHEDVCQVARRRSL*VLLFPP
Trigger: GGGAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCG...CGCTACCTGACATACATCTTCATGCATGCAGGGATAGAACACCTGGGACTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CCA 90 bp CAGCCTCTCTTGCGCCCCCAAAGCTCTTTCTCTCCTAAGGGAGATAGGATGGAAGATGGGAAGCCACTGTaGCCCAAGACCCCAAATGCC +
Preference number: 4 (lower is better)
Translates to: QPLLRPQSSFSPKGDRMEDGKPL*PKTPNA
Trigger: GGCATTTGGGGTCTTGGGCCACAGTGGCTTCCCATC...TTCCATCCTATCTCCCTTAGGAGAGAAAGAGCTTTGGGGGCGCAAGAGAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGCCCTCAGCATGGCACTaGTGCAGGGGAGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVPSAWH*CRGAGP
Trigger: AGGTCCTGCTCCCCTGCACCAGTGCCATGCTGAGGG...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCAAGTAACAAGCTTCCCTaGGAGTCCCCGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPSNKLP*ESPREL
Trigger: CAGCTCCCTCGGGGACTCCCAGGGAAGCTTGTTACT...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCAGGACACACTTAACATaGTGGGAGACACGATTCCGC +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLRTHLT*WETRFR
Trigger: GCGGAATCGTGTCTCCCACCATGTTAAGTGTGTCCT...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCTGTTGCTCATTAGGCTaGCAAAATCCTGGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLCCSLG*QNPGSR
Trigger: TCGGCTACCAGGATTTTGTCAGCCTAATGAGCAACA...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000538145.5
CDS-3UTR TCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGACCTGCAGTACAAATTaGCCTAGTGACACCCCATTG +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLTCSTN*PSDTPL
Trigger: CAATGGGGTGTCACTAGGTCAATTTGTACTGCAGGT...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGCCACATCAACTCAAAAATCCACCACAGTaGCTGGTCCTGGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LARCHQSSREKRQQPHQLKNPPQ*LVLEPL
Trigger: CAGAGGCTCCAGGACCAGTCACTGTGGTGGATTTTT...GAGTTGATGTGGCTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTCAAGACGCCCCAGGCTaGCGCAACACCGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFQDAPG*RNTAKG
Trigger: GCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCTTG...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGCCTCCTCTGAGGCACTaGCTTCCATCTACATCTTTC +
Preference number: 4 (lower is better)
Translates to: QTFTLARCHQSSREKRQQPPLRH*LPSTSF
Trigger: GAAAGATGTAGATGGAAGTCAGTGCCTCAGAGGAGG...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGGTGAAGTGACCCTATaGCCCCACCCTGTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFGEVTL*PHPVAP
Trigger: CGGGGCCACAGGGTGGGGTCATAGGGTCACTTCACC...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp ACACTTAACATGGTGGGAGACACGATTCCGCCTCCACTGTCCTTCTCAGTAACACTGGGTCAGGTGAAGTaGCCCTATGACCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: TLNMVGDTIPPPLSFSVTLGQVK*PYDPTL
Trigger: CAGGGTGGGGTCATAGGGTCACTTCACCTGACCCAG...TGTTACTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACTACCTCCACCAGCCTaGAGATTTACACACCACCCC +
Preference number: 4 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPLPPPA*RFTHHP
Trigger: GGGGTGGTGTGTAAATCTTCAGGCTGGTGGAGGTAG...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AAGGACATTCAGCAACCACAGCACACCACGGTCTGCCACCTCTCACGGATGCCCCTTCCCCAGTTTCTGTaGTTCCTCTCCCGTTTAATG +
Preference number: 4 (lower is better)
Translates to: KDIQQPQHTTVCHLSRMPLPQFL*FLSRLM
Trigger: CATTAAACGGGAGAGGAATCACAGAAACTGGGGAAG...GGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTGTGGTTGCTGAATGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CCAGATGCCTTTCAGAAAAGGGTCTCCACTGTGTGTCCAAATCTAAACACAAACGTTCCAGCTCCTCGATaGGCTCCGCCTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PDAFQKRVSTVCPNLNTNVPAPR*APPRRR
Trigger: CCTGCGCCGAGGCGGAGCGCATCGAGGAGCTGGAAC...GTTTGTGTTTAGATTTGGACACACAGTGGAGACCCTTTTCTGAAAGGCATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR GCA 90 bp AGCAGCTTGAACTGGCACTTCATGCCTGACCAGTTCATGACAATGTTGGCCAGACCTTGCTGCTTAGCCTaGGGTTGCCCTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: SSLNWHFMPDQFMTMLARPCCLA*GCPAGW
Trigger: CCATCCTGCAGGGCAACCGCAGGCTAAGCAGCAAGG...TCTGGCCAACATTGTCATGAACTGGTCAGGCATGAAGTGCCAGTTCAAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGTTCTATCCCTGCATaGATGAAGATGTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCCSIPA*MKMYVR
Trigger: CCTGACATACATCTTCATGCATGCAGGGATAGAACA...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCCAGGTGTTCTATCCCTaGATGCATGAAGATGTATGT +
Preference number: 4 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCQVFYP*MHEDVC
Trigger: ACATACATCTTCATGCATGCAGGGATAGAACACCTG...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp GCGGAGCCACACGGCCCGCCCAAACTCCATGCTCATACAGATAAGGGCCACAGCCAGGTGTTCTATCCCTaGATGCATGAAGATGTATGT +
Preference number: 4 (lower is better)
Translates to: AEPHGPPKLHAHTDKGHSQVFYP*MHEDVC
Trigger: ACATACATCTTCATGCATGCAGGGATAGAACACCTG...GCTGTGGCCCTTATCTGTATGAGCATGGAGTTTGGGCGGGCCGTGTGGCTCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp ACACTTAACATGGTGGGAGACACGATTCCGCCTCCACTGTCCTTCTCAGTAACAATTCGGGTGGCTCCATaGACCATCTCCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: TLNMVGDTIPPPLSFSVTIRVAP*TISRGT
Trigger: GGTGCCCCTGGAGATGGTGCATGGAGCCACCCGAAT...TGTTACTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTCAGATCATGCCCCGGTaGACACCAACCAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGQIMPR*TPTSPG
Trigger: TCCTGGGCTGGTTGGTGTGCACCGGGGCATGATCTG...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGGAGGAGAAAGCCAGATaGCACAAAGAGAACCCCTCT +
Preference number: 4 (lower is better)
Translates to: QTFTLARCHQSSREKRQQEEKAR*HKENPS
Trigger: AGAGGGGTTCTCTTTGTGGCATCTGGCTTTCTCCTC...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGCAGCAGCTTGAACTaGCACTTCATGCCTGACCAG +
Preference number: 4 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPRSSLN*HFMPDQ
Trigger: CTGGTCAGGCATGAAGTGCCAGTTCAAGCTGCTGCG...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGTAAACCAGGGAGTTCTTCAAGTAACGTGGATGAGTTACCTGCAGTACAAATTTCCCCTCCCCGACCTTaGGCCTCCAGCCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GKPGSSSSNVDELPAVQISPPRP*ASSPQG
Trigger: CCCCTGAGGGCTGGAGGCCCAAGGTCGGGGAGGGGA...AATTTGTACTGCAGGTAACTCATCCACGTTACTTGAAGAACTCCCTGGTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CCA 90 bp ACACTTAACATGGTGGGAGACACGATTCCGCCTCCACTGTCCTTCTCAGTAACATCACGGATGCCCACATaGGCCCCCTGCATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: TLNMVGDTIPPPLSFSVTSRMPT*APCILH
Trigger: ATGGAGGATGCAGGGGGCCCATGTGGGCATCCGTGA...TGTTACTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCGGATGGGCACCAGGCTaGAGGAAGACCGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: MMPGKAFTAPRESALRICGWAPG*RKTVPT
Trigger: TGTGGGAACGGTCTTCCTCCAGCCTGGTGCCCATCC...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp ACACTTAACATGGTGGGAGACACGATTCCGCCTCCACTGTCCTTCTCAGTAACACCCTGTGGCCCCGCTTaGAAGTCATGGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: TLNMVGDTIPPPLSFSVTPCGPA*KSWLGE
Trigger: CTCTCCCAACCATGACTTCCAAGCGGGGCCACAGGG...TGTTACTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTCACCACCCCCTGGGCTaGCAGCCACCTCAGACAAGG +
Preference number: 4 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFHHPLG*QPPQTR
Trigger: CCTTGTCTGAGGTGGCTGCCAGCCCAGGGGGTGGTG...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp ACATGTCCAGTAGGCCCTCTTCTTACTGGAGCCCCAGACACAGCAGGTGTCAAGGAGCCAGTGAGTCTATaGCTGCTGTTTGGGGATTCC +
Preference number: 4 (lower is better)
Translates to: TCPVGPLLTGAPDTAGVKEPVSL*LLFGDS
Trigger: GGAATCCCCAAACAGCAGCCATAGACTCACTGGCTC...CTTGACACCTGCTGTGTCTGGGGCTCCAGTAAGAAGAGGGCCTACTGGACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGAACCTTTTTGGATATaGAGGCCATCTCAGACGGAA +
Preference number: 4 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQEPFWI*RPSQTE
Trigger: TTCCGTCTGAGATGGCCTTCATATCCAAAAAGGTTC...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAAGAACCTTTTTGGATATaGAGGCCATCTCAGACGGAA +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKEPFWI*RPSQTE
Trigger: TTCCGTCTGAGATGGCCTTCATATCCAAAAAGGTTC...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTGAGGCAGCAATGTCCTaGCTCCTTCTGCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGEAAMS*LLLHPP
Trigger: GGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTC...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAACTTCACTGCGCTAGCTaGCCCGCCGGCCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKLHCAS*PAGLRL
Trigger: GAGGCGGAGGCCGGCGGGGCAGCTAGCGCAGTGAAG...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR GCA 90 bp TTACCTGCAGTACAAATTGACCTAGTGACACCCCATTGTAGAGGAAAAAGGCAAGTTCCAGCTCCTCGATaGGCTCCGCCTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPAVQIDLVTPHCRGKRQVPAPR*APPRRR
Trigger: CCTGCGCCGAGGCGGAGCGCATCGAGGAGCTGGAAC...TTGCCTTTTTCCTCTACAATGGGGTGTCACTAGGTCAATTTGTACTGCAGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTAGCCTGCGGTTGCCCTaGAGGATGGCTTGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFSLRLP*RMAWRK
Trigger: CTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCT...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTGGAGGAAGAAGCTGCTaGTCAATCCGCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RGAGPRELHMWMRPGQSIGGRSC*SIRSSE
Trigger: CTCACTGCTGCGGATTGAGCAGCAGCTTCTTCCTCC...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTTCCGAGGCTACTGGCTaGCCTCCCTCTGAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGSEATG*PPSEVH
Trigger: ATGAACCTCAGAGGGAGGGCAGCCAGTAGCCTCGGA...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTTGTCCTGACTCCTTCTaGATCCTCCCCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RGAGPRELHMWMRPGQSICPDSF*ILPWSS
Trigger: GGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACA...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp ATTGAGTCCCAGGTGTTCTATCCCTGCATGCATGAAGATGTATGTCAGGTAGCGCCCTGCAGGATGGCTTaGCGGAAGCTGTTGGAACGC +
Preference number: 4 (lower is better)
Translates to: IESQVFYPCMHEDVCQVAPCRMA*RKLLER
Trigger: GCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGG...CGCTACCTGACATACATCTTCATGCATGCAGGGATAGAACACCTGGGACTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CCA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCGTTCTTCAAGTAACGTaGATGAGTTACCTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCVLQVT*MSYLQY
Trigger: GTACTGCAGGTAACTCATCCACGTTACTTGAAGAAC...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTAGAAGAGCCCACGACTaGAGCGGTCATGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGRRAHD*SGHVSH
Trigger: GTGGCTGACATGACCGCTCCAGTCGTGGGCTCTTCT...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCACACAAACATTACAGTaGCCCAGAGTCTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLTQTLQ*PRVFCP
Trigger: AGGACAGAAGACTCTGGGCCACTGTAATGTTTGTGT...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCCCCAGACCTTCACCCTaGCCCGATGTCATCAGAGCA +
Preference number: 4 (lower is better)
Translates to: MMPGKAFTAPRESALRICPRPSP*PDVIRA
Trigger: TGCTCTGATGACATCGGGCCAGGGTGAAGGTCTGGG...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTCCCAGACCTTCACCCTaGCCCGATGTCATCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGPRPSP*PDVIRA
Trigger: TGCTCTGATGACATCGGGCCAGGGTGAAGGTCTGGG...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGACTTCTGGGCTGTCAGTaGTTGAGAATTCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: STGSNMNDARKGFHGTQGLLGCQ*LRIPRA
Trigger: TGCTCTTGGAATTCTCAACCACTGACAGCCCAGAAG...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp ACACTTAACATGGTGGGAGACACGATTCCGCCTCCACTGTCCTTCTCAGTAACAGCCTCCTCCCAGGCCTaGCGTTCTTTGTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TLNMVGDTIPPPLSFSVTASSQA*RSLFFW
Trigger: CCAGAAGAACAAAGAACGCCAGGCCTGGGAGGAGGC...TGTTACTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CCAGATGCCTTTCAGAAAAGGGTCTCCACTGTGTGTCCAAATCTAAACACAAACGGCCAAGATGCGGTATaGCTGGGCCTCGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PDAFQKRVSTVCPNLNTNGQDAV*LGLACQ
Trigger: CTGGCAGGCGAGGCCCAGCCATACCGCATCTTGGCC...GTTTGTGTTTAGATTTGGACACACAGTGGAGACCCTTTTCTGAAAGGCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CCAGATGCCTTTCAGAAAAGGGTCTCCACTGTGTGTCCAAATCTAAACACAAACCTGCGGCCCTCAGCATaGCACTGGTGCAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PDAFQKRVSTVCPNLNTNLRPSA*HWCRGA
Trigger: TGCTCCCCTGCACCAGTGCCATGCTGAGGGCCGCAG...GTTTGTGTTTAGATTTGGACACACAGTGGAGACCCTTTTCTGAAAGGCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTTATGACCCCACCCTGTaGCCCCGCTTGGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGYDPTL*PRLEVM
Trigger: CATGACTTCCAAGCGGGGCCACAGGGTGGGGTCATA...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAATCCTCTGGGCAAGAATaGTTCTCATGGAAATCGAGA +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKSSGQE*FSWKSR
Trigger: TCTCGATTTCCATGAGAACCATTCTTGCCCAGAGGA...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGTCCTCTGGGCAAGAATaGTTCTCATGGAAATCGAGA +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLSSGQE*FSWKSR
Trigger: TCTCGATTTCCATGAGAACCATTCTTGCCCAGAGGA...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGACCCAACAATTCTCCTaGGGCAAAGTTTTCCAACTA +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLTQQFS*GKVFQL
Trigger: TAGTTGGAAAACTTTGCCTCAGGAGAATTGTTGGGT...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGGCACGGGGAGCAACATaGATGATGCCAGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVARGAT*MMPGKA
Trigger: AGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGC...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GCAGTACAAATTGACCTAGTGACACCCCATTGTAGAGGAAAAAGGCAACCTCCATGGCGGATAAGTCGCTaGGAGAGGCTCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: AVQIDLVTPHCRGKRQPPWRISR*ERLSPF
Trigger: GAAGGGGCTGAGCCTCTCGCAGCGACTTATCCGCCA...TGGAGGTTGCCTTTTTCCTCTACAATGGGGTGTCACTAGGTCAATTTGTACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGTGTTCTATCCCTGCATaGATGAAGATGTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQCSIPA*MKMYVR
Trigger: CCTGACATACATCTTCATGCATGCAGGGATAGAACA...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCTGTTCTATCCCTGCATaGATGAAGATGTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLCSIPA*MKMYVR
Trigger: CCTGACATACATCTTCATGCATGCAGGGATAGAACA...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR GCA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGCAGGTGTTCTATCCCTaGATGCATGAAGATGTATGT +
Preference number: 4 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQQVFYP*MHEDVC
Trigger: ACATACATCTTCATGCATGCAGGGATAGAACACCTG...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTATTCGGGTGGCTCCATaGACCATCTCCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFIRVAP*TISRGT
Trigger: GGTGCCCCTGGAGATGGTGCATGGAGCCACCCGAAT...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GCAGTACAAATTGACCTAGTGACACCCCATTGTAGAGGAAAAAGGCAACCTCCAATTCGGGTGGCTCCATaGACCATCTCCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: AVQIDLVTPHCRGKRQPPIRVAP*TISRGT
Trigger: GGTGCCCCTGGAGATGGTGCATGGAGCCACCCGAAT...TGGAGGTTGCCTTTTTCCTCTACAATGGGGTGTCACTAGGTCAATTTGTACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTAGGCACAACAGATCATaGCCCGGTGCACACCAACCA +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGRHNRS*PGAHQP
Trigger: TGGTTGGTGTGCACCGGGGCATGATCTGTTGTGCCT...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CAGCCTCTCTTGCGCCCCCAAAGCTCTTTCTCTCCTAAGGGAGATAGGATGGAAGGCACCCGTGTGAGATaGCAATATCCTGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: QPLLRPQSSFSPKGDRMEGTRVR*QYPGRK
Trigger: CTTTCTTCCAGGATATTGGCATCTCACACGGGTGCC...TTCCATCCTATCTCCCTTAGGAGAGAAAGAGCTTTGGGGGCGCAAGAGAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTCCCTGCAGGATGGCTTaGCGGAAGCTGTTGGAACGC +
Preference number: 4 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFPCRMA*RKLLER
Trigger: GCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGG...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCGTTCTTCAAGTAACGTaGATGAGTTACCTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLVLQVT*MSYLQY
Trigger: GTACTGCAGGTAACTCATCCACGTTACTTGAAGAAC...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGCGCAGCAGCTTGAACTaGCACTTCATGCCTGACCAG +
Preference number: 4 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVRSSLN*HFMPDQ
Trigger: CTGGTCAGGCATGAAGTGCCAGTTCAAGCTGCTGCG...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCAGCTGTGGGTGGTAAACCAGGGAGTTCTTCAAGTAACGTGGATGAGTTACCTCGCAGCAGCTTGAACTaGCACTTCATGCCTGACCAG +
Preference number: 4 (lower is better)
Translates to: AAVGGKPGSSSSNVDELPRSSLN*HFMPDQ
Trigger: CTGGTCAGGCATGAAGTGCCAGTTCAAGCTGCTGCG...AGGTAACTCATCCACGTTACTTGAAGAACTCCCTGGTTTACCACCCACAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAACACAAACATTACAGTaGCCCAGAGTCTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: STGSNMNDARKGFHGTQGTQTLQ*PRVFCP
Trigger: AGGACAGAAGACTCTGGGCCACTGTAATGTTTGTGT...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGCTAAGGGAGATAGGATaGAACCTTTTTGGATATGAA +
Preference number: 4 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTLREIG*NLFGYE
Trigger: TTCATATCCAAAAAGGTTCCATCCTATCTCCCTTAG...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTGTAGACGAGGGTCCTTaGCAGCAGAGGACACACTTA +
Preference number: 4 (lower is better)
Translates to: RGAGPRELHMWMRPGQSIVDEGP*QQRTHL
Trigger: TAAGTGTGTCCTCTGCTGCCAAGGACCCTCGTCTAC...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCATGTTGCTCATTAGGCTaGCAAAATCCTGGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPCCSLG*QNPGSR
Trigger: TCGGCTACCAGGATTTTGTCAGCCTAATGAGCAACA...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR TCA 90 bp CAGCCTCTCTTGCGCCCCCAAAGCTCTTTCTCTCCTAAGGGAGATAGGATGGAACTATCCCTGCATGCATaGAGATGTATGTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: QPLLRPQSSFSPKGDRMELSLHA*RCMSGS
Trigger: GCTACCTGACATACATCTTCATGCATGCAGGGATAG...TTCCATCCTATCTCCCTTAGGAGAGAAAGAGCTTTGGGGGCGCAAGAGAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACTGGCACTTCATGCCTaGCCAGTTCATGACAATGTT +
Preference number: 4 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPLALHA*PVHDNV
Trigger: AACATTGTCATGAACTGGTCAGGCATGAAGTGCCAG...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGGACGGAAACAAGAGCTaGACCTGGCAAACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVDGNKS*TWQTSA
Trigger: TGCTGAGGTTTGCCAGGTTCAGCTCTTGTTTCCGTC...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp CCAGATGCCTTTCAGAAAAGGGTCTCCACTGTGTGTCCAAATCTAAACACAAACAATGCCTGGCCTGACTaGCCCTGGACCCTGCTACAC +
Preference number: 4 (lower is better)
Translates to: PDAFQKRVSTVCPNLNTNNAWPD*PWTLLH
Trigger: GTGTAGCAGGGTCCAGGGTCAGTCAGGCCAGGCATT...GTTTGTGTTTAGATTTGGACACACAGTGGAGACCCTTTTCTGAAAGGCATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCCAGGTGTTCTATCCCTaGATGCATGAAGATGTATGT +
Preference number: 4 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVQVFYP*MHEDVC
Trigger: ACATACATCTTCATGCATGCAGGGATAGAACACCTG...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGATGTTGGAACGCTTGTTaGTCATCTGATCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: STGSNMNDARKGFHGTQGCWNAC*SSDQTG
Trigger: TCCTGTTTGATCAGATGAGCAACAAGCGTTCCAACA...TCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536287.2
CDS-3UTR CCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACTTGGCGGAAGCTGTTaGAACGCTTGTTGCTCATTA +
Preference number: 4 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPLGGSC*NACCSL
Trigger: TAATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAG...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR CCA 90 bp CAATGTTGGCCAGATGGGCAGAGACGAGAGCATACACCCCTCCAGAAGAGCCCAGTTCTTCAAGTAACGTaGATGAGTTACCTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: QCWPDGQRREHTPLQKSPVLQVT*MSYLQY
Trigger: GTACTGCAGGTAACTCATCCACGTTACTTGAAGAAC...TGGGCTCTTCTGGAGGGGTGTATGCTCTCGTCTCTGCCCATCTGGCCAACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTACCCTAAAACAAGGCTaGGCATGGAGGCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFTLKQG*AWRLGH
Trigger: GTGCCCCAGCCTCCATGCCCAGCCTTGTTTTAGGGT...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGCTAAGGGAGATAGGATaGAACCTTTTTGGATATGAA +
Preference number: 4 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMLREIG*NLFGYE
Trigger: TTCATATCCAAAAAGGTTCCATCCTATCTCCCTTAG...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGCATACCAGACAGAGGTaGCACTCTGCTCATTCCACC +
Preference number: 4 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVHTRQR*HSAHST
Trigger: GGTGGAATGAGCAGAGTGCCACCTCTGTCTGGTATG...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGAGTTTCTGTATCCTGTaGATAAAAGGCCAACCTACC +
Preference number: 4 (lower is better)
Translates to: QTFTLARCHQSSREKRQQSFCIL*IKGQPT
Trigger: GGTAGGTTGGCCTTTTATCCACAGGATACAGAAACT...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTTTCCCAGGGTCAAACTaGTCAAACAGGACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RGAGPRELHMWMRPGQSIFPGSN*SNRTFQ
Trigger: CTGGAAAGTCCTGTTTGATCAGTTTGACCCTGGGAA...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR TCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGGGGGAGCAACATGAATaGTGCCAGGAAAGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVGEQHE*CQERLS
Trigger: TGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCC...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGGAGGAGGAAGAAGCTaGTGCTCAATCCGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFGGGRS*CSIRSS
Trigger: ACTGCTGCGGATTGAGCAGCAGCTTCTTCCTCCTCC...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGAATCTTCTAGTTCAATaGTTTCTCACCCCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLNLLVQ*FLTPKR
Trigger: TCTCTTAGGGGTGAGAAAGCATTGAACTAGAAGATT...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTGAGGAGAAAGCCAGATaGCACAAAGAGAACCCCTCT +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGEEKAR*HKENPS
Trigger: AGAGGGGTTCTCTTTGTGGCATCTGGCTTTCTCCTC...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTCAAGCCCAATTCGGGTaGCTCCATGCACCATCTCCA +
Preference number: 4 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFQAQFG*LHAPSP
Trigger: TGGAGATGGTGCATGGAGCCACCCGAATTGGGCTTG...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAACCCAGGAGGGCACCCTaGTTTCAGCCAGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKPRRAP*FQPGHS
Trigger: GCTGTGACCTGGCTGAAACCAGGGTGCCCTCCTGGG...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTACCTGTGTAATGGGGTaGGGTGGATTTGATAACCAC +
Preference number: 4 (lower is better)
Translates to: RGAGPRELHMWMRPGQSITCVMG*GGFDNH
Trigger: GTGGTTATCAAATCCACCCCACCCCATTACACAGGT...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CCAGATGCCTTTCAGAAAAGGGTCTCCACTGTGTGTCCAAATCTAAACACAAACGCCTCCTCCCAGGCCTaGCGTTCTTTGTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PDAFQKRVSTVCPNLNTNASSQA*RSLFFW
Trigger: CCAGAAGAACAAAGAACGCCAGGCCTGGGAGGAGGC...GTTTGTGTTTAGATTTGGACACACAGTGGAGACCCTTTTCTGAAAGGCATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGAGGACACACTTAACATaGTGGGAGACACGATTCCGC +
Preference number: 4 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVRTHLT*WETRFR
Trigger: GCGGAATCGTGTCTCCCACCATGTTAAGTGTGTCCT...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAAGGACACGGCCAGCCTTaGCCATGGGGAAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKGHGQP*PWGSAA
Trigger: AGCAGCACTTCCCCATGGCCAAGGCTGGCCGTGTCC...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTTCTATGGCTGCTGTTTaGGGATTCCCCAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGSMAAV*GFPSFQ
Trigger: CTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGA...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAACAAGAATGGTTCTCATaGAAATCGAGAGTCCTATTA +
Preference number: 4 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKQEWFS*KSRVLL
Trigger: TAATAGGACTCTCGATTTCCATGAGAACCATTCTTG...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp ACACTTAACATGGTGGGAGACACGATTCCGCCTCCACTGTCCTTCTCAGTAACAGCTCCCCTAATCCTCTaGGCAAGAATGGTTCTCATG +
Preference number: 4 (lower is better)
Translates to: TLNMVGDTIPPPLSFSVTAPLIL*ARMVLM
Trigger: CATGAGAACCATTCTTGCCCAGAGGATTAGGGGAGC...TGTTACTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCGGGGCAGTTCACTGTTaGGCACTGTTTTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: MMPGKAFTAPRESALRICGAVHC*ALFLRQ
Trigger: CTGCCTTAAAAACAGTGCCCAACAGTGAACTGCCCC...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCGGGTGGAACTTGGAATaGAGTTTATTCCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: MMPGKAFTAPRESALRICGWNLE*SLFPLH
Trigger: ATGCAGGGGGAATAAACTTCATTCCAAGTTCCACCC...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAACTGGGTCAGGTGAAGTaGCCCTATGACCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKLGQVK*PYDPTL
Trigger: CAGGGTGGGGTCATAGGGTCACTTCACCTGACCCAG...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCAGGCACCCAGGGAATCTaGATTACGTATTTGCAAATT +
Preference number: 4 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPGTQGI*ITYLQI
Trigger: AATTTGCAAATACGTAATGCAGATTCCCTGGGTGCC...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGCGAAGACGGTGTACATaGCCACAAAAATCCACCACA +
Preference number: 4 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVRRRCT*PQKSTT
Trigger: TGTGGTGGATTTTTGTGGCCATGTACACCGTCTTCG...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTCAAGGAGACACCACATaGCCTGCAATTATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RGAGPRELHMWMRPGQSIQGDTT*PAIISE
Trigger: CTCAGAAATAATTGCAGGCCATGTGGTGTCTCCTTG...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CCAGATGCCTTTCAGAAAAGGGTCTCCACTGTGTGTCCAAATCTAAACACAAACCTTGGAAGTCATGGTTaGGAGAGGGGATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PDAFQKRVSTVCPNLNTNLGSHG*ERGWRW
Trigger: CCACCTCCATCCCCTCTCCCAACCATGACTTCCAAG...GTTTGTGTTTAGATTTGGACACACAGTGGAGACCCTTTTCTGAAAGGCATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp ATTGAGTCCCAGGTGTTCTATCCCTGCATGCATGAAGATGTATGTCAGGTAGCGCTTGGCGGAAGCTGTTaGAACGCTTGTTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: IESQVFYPCMHEDVCQVALGGSC*NACCSS
Trigger: TGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAG...CGCTACCTGACATACATCTTCATGCATGCAGGGATAGAACACCTGGGACTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR TCA 90 bp ATTGAGTCCCAGGTGTTCTATCCCTGCATGCATGAAGATGTATGTCAGGTAGCGTCAAGGAAGGCTTCCTaGTCAAACAGGACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: IESQVFYPCMHEDVCQVASRKAS*SNRTFQ
Trigger: CTGGAAAGTCCTGTTTGATCAGGAAGCCTTCCTTGA...CGCTACCTGACATACATCTTCATGCATGCAGGGATAGAACACCTGGGACTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CCA 90 bp ACACTTAACATGGTGGGAGACACGATTCCGCCTCCACTGTCCTTCTCAGTAACACAAGGAGACACCACATaGCCTGCAATTATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TLNMVGDTIPPPLSFSVTQGDTT*PAIISE
Trigger: CTCAGAAATAATTGCAGGCCATGTGGTGTCTCCTTG...TGTTACTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGGAGAGTCCTATTAGCTaGCAAAAGAGCCTCATTAGG +
Preference number: 4 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVESPIS*QKSLIR
Trigger: CCTAATGAGGCTCTTTTGCCAGCTAATAGGACTCTC...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CAGCCTCTCTTGCGCCCCCAAAGCTCTTTCTCTCCTAAGGGAGATAGGATGGAAATTTGCAAATTAAATTaGACGCTGGGGGAAGATCCT +
Preference number: 4 (lower is better)
Translates to: QPLLRPQSSFSPKGDRMEICKLN*TLGEDP
Trigger: AGGATCTTCCCCCAGCGTCCAATTTAATTTGCAAAT...TTCCATCCTATCTCCCTTAGGAGAGAAAGAGCTTTGGGGGCGCAAGAGAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAATCTGCCCGGCCTAGCTaGGCTGGTGATGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKSARPS*AGDEKK
Trigger: TTTCTTCTCATCACCAGCTCAGCTAGGCCGGGCAGA...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp ACACTTAACATGGTGGGAGACACGATTCCGCCTCCACTGTCCTTCTCAGTAACAACCCAACAATTCTCCTaGGGCAAAGTTTTCCAACTA +
Preference number: 4 (lower is better)
Translates to: TLNMVGDTIPPPLSFSVTTQQFS*GKVFQL
Trigger: TAGTTGGAAAACTTTGCCTCAGGAGAATTGTTGGGT...TGTTACTGAGAAGGACAGTGGAGGCGGAATCGTGTCTCCCACCATGTTAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp CCAGATGCCTTTCAGAAAAGGGTCTCCACTGTGTGTCCAAATCTAAACACAAACGGCACCCGTGTGAGATaGCAATATCCTGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: PDAFQKRVSTVCPNLNTNGTRVR*QYPGRK
Trigger: CTTTCTTCCAGGATATTGGCATCTCACACGGGTGCC...GTTTGTGTTTAGATTTGGACACACAGTGGAGACCCTTTTCTGAAAGGCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTCTTCTGGGCTGTCAGTaGTTGAGAATTCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFLLGCQ*LRIPRA
Trigger: TGCTCTTGGAATTCTCAACCACTGACAGCCCAGAAG...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CCAGATGCCTTTCAGAAAAGGGTCTCCACTGTGTGTCCAAATCTAAACACAAACCTTGGCGGAAGCTGTTaGAACGCTTGTTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: PDAFQKRVSTVCPNLNTNLGGSC*NACCSS
Trigger: AGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAG...GTTTGTGTTTAGATTTGGACACACAGTGGAGACCCTTTTCTGAAAGGCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536287.2
CDS-3UTR TCA 90 bp CCAGATGCCTTTCAGAAAAGGGTCTCCACTGTGTGTCCAAATCTAAACACAAACGGGTGGAACTTGGAATaGAGTTTATTCCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PDAFQKRVSTVCPNLNTNGWNLE*SLFPLH
Trigger: ATGCAGGGGGAATAAACTTCATTCCAAGTTCCACCC...GTTTGTGTTTAGATTTGGACACACAGTGGAGACCCTTTTCTGAAAGGCATCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CCAGATGCCTTTCAGAAAAGGGTCTCCACTGTGTGTCCAAATCTAAACACAAACAGGGAACTACATATGTaGATGAGGCCAGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: PDAFQKRVSTVCPNLNTNRELHM*MRPGQS
Trigger: AGATTGCCCTGGCCTCATCCACATATGTAGTTCCCT...GTTTGTGTTTAGATTTGGACACACAGTGGAGACCCTTTTCTGAAAGGCATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTATTTGCAAATTAAATTaGACGCTGGGGGAAGATCCT +
Preference number: 4 (lower is better)
Translates to: KNDSSHINSSARCLSEKGICKLN*TLGEDP
Trigger: AGGATCTTCCCCCAGCGTCCAATTTAATTTGCAAAT...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAAGGGGAGCAACATGAATaGTGCCAGGAAAGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKGEQHE*CQERLS
Trigger: TGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCC...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTTCTGCATTACGTATTTaGAAATTAAATTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: RGAGPRELHMWMRPGQSISALRI*KLNWTL
Trigger: CAGCGTCCAATTTAATTTGCAAATACGTAATGCAGA...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAACTGGCACTTCATGCCTaGCCAGTTCATGACAATGTT +
Preference number: 4 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKLALHA*PVHDNV
Trigger: AACATTGTCATGAACTGGTCAGGCATGAAGTGCCAG...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CCAGATGCCTTTCAGAAAAGGGTCTCCACTGTGTGTCCAAATCTAAACACAAACGTTCTTCAAGTAACGTaGATGAGTTACCTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: PDAFQKRVSTVCPNLNTNVLQVT*MSYLQY
Trigger: GTACTGCAGGTAACTCATCCACGTTACTTGAAGAAC...GTTTGTGTTTAGATTTGGACACACAGTGGAGACCCTTTTCTGAAAGGCATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR TCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAATTTAATGAGAGCCAGTaGGTCTATGGCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKFNESQ*VYGCCL
Trigger: CAAACAGCAGCCATAGACTCACTGGCTCTCATTAAA...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp GTAAACCAGGGAGTTCTTCAAGTAACGTGGATGAGTTACCTGCAGTACAAATTGTGTTCTATCCCTGCATaGATGAAGATGTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: VNQGVLQVTWMSYLQYKLCSIPA*MKMYVR
Trigger: CCTGACATACATCTTCATGCATGCAGGGATAGAACA...CAATTTGTACTGCAGGTAACTCATCCACGTTACTTGAAGAACTCCCTGGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR GCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAAGGCACCCAGGGAATCTaGATTACGTATTTGCAAATT +
Preference number: 4 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKGTQGI*ITYLQI
Trigger: AATTTGCAAATACGTAATGCAGATTCCCTGGGTGCC...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CCA 90 bp CCAGATGCCTTTCAGAAAAGGGTCTCCACTGTGTGTCCAAATCTAAACACAAACCAAGAATGGTTCTCATaGAAATCGAGAGTCCTATTA +
Preference number: 4 (lower is better)
Translates to: PDAFQKRVSTVCPNLNTNQEWFS*KSRVLL
Trigger: TAATAGGACTCTCGATTTCCATGAGAACCATTCTTG...GTTTGTGTTTAGATTTGGACACACAGTGGAGACCCTTTTCTGAAAGGCATCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR GCA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAAAATCTTCTAGTTCAATaGTTTCTCACCCCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKNLLVQ*FLTPKR
Trigger: TCTCTTAGGGGTGAGAAAGCATTGAACTAGAAGATT...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGCTCCCCTCCCCGACCTaGGGCCTCCAGCCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMLPSPT*GLQPSG
Trigger: CCCTGAGGGCTGGAGGCCCAAGGTCGGGGAGGGGAG...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CAA 90 bp AGACGCCCCAGGCTGACGCAACACCGCCAAAGGCGTGGGCCCACAGTGCCACAGAGGAGGACCTCCCTTTaGTGCGGGTCCAGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: RRPRLTQHRQRRGPTVPQRRTSL*CGSSLE
Trigger: CTCCAAGCTGGACCCGCACAAAAGGGAGGTCCTCCT...CTGTGGCACTGTGGGCCCACGCCTTTGGCGGTGTTGCGTCAGCCTGGGGCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR CAA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAACTCCCCTCCCCGACCTaGGGCCTCCAGCCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKLPSPT*GLQPSG
Trigger: CCCTGAGGGCTGGAGGCCCAAGGTCGGGGAGGGGAG...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGCTCCCCTCCCCGACCTaGGGCCTCCAGCCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQLPSPT*GLQPSG
Trigger: CCCTGAGGGCTGGAGGCCCAAGGTCGGGGAGGGGAG...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CTCCCTCCAGCAGGGCCATTCTGCCACCGGTCAGTGATGCTCAGGGGCAGGTGTCTGCTTAGCCTGCGGTaGCCCTGCAGGATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LPPAGPFCHRSVMLRGRCLLSLR*PCRMAW
Trigger: CCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCAG...ACACCTGCCCCTGAGCATCACTGACCGGTGGCAGAATGGCCCTGCTGGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CAATGTTGGCCAGATGGGCAGAGACGAGAGCATACACCCCTCCAGAAGAGCCCACTCCCCTCCCCGACCTaGGGCCTCCAGCCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: QCWPDGQRREHTPLQKSPLPSPT*GLQPSG
Trigger: CCCTGAGGGCTGGAGGCCCAAGGTCGGGGAGGGGAG...TGGGCTCTTCTGGAGGGGTGTATGCTCTCGTCTCTGCCCATCTGGCCAACATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS GCA 90 bp CCATCCGCGTGGCTGTCGGCAAGAGCCAGGAGGACCTCCCTTTTGTaGGGGTCCAGCTTGGAGCTGTGGCTCTCCAGAAGACTCCGGAAC +
Preference number: 5 (lower is better)
Translates to: PSAWLSARARRTSLL*GSSLELWLSRRLRN
Trigger: GTTCCGGAGTCTTCTGGAGAGCCACAGCTCCAAGCTGGACCCGCACAAAAGGGAGGTCCTCCTGGCTCTTGCCGACAGCCACGCGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000431505.6
ENST00000538145.5
ENST00000582967.1
CDS-3UTR CAA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGGCCCTGCAGGATGGCTaGGCGGAAGCTGTTGGAACG +
Preference number: 5 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTALQDG*AEAVGT
Trigger: CGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGC...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp GCGGAGCCACACGGCCCGCCCAAACTCCATGCTCATACAGATAAGGGCCACAGCCTGCTTAGCCTGCGGTaGCCCTGCAGGATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: AEPHGPPKLHAHTDKGHSLLSLR*PCRMAW
Trigger: CCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCAG...GCTGTGGCCCTTATCTGTATGAGCATGGAGTTTGGGCGGGCCGTGTGGCTCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CAA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCAGTGCGCCACAAAGCTaGGGTGAGGGCACGGGGGAT +
Preference number: 5 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCSAPQS*GEGTGD
Trigger: ATCCCCCGTGCCCTCACCCAAGCTTTGTGGCGCACT...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CAA 90 bp GCACCAGGCTGGAGGAAGACCGTTCCCACACTCCTGCCCCTGTTTCTGGACACGGGATCCTTGGAGGGCTaGAGCTCTCCCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: APGWRKTVPTLLPLFLDTGSLEG*SSPSSR
Trigger: CCTGCTGGAGGGAGAGCTCAAGCCCTCCAAGGATCC...CGTGTCCAGAAACAGGGGCAGGAGTGTGGGAACGGTCTTCCTCCAGCCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCGCCCTGCAGGATGGCTaGGCGGAAGCTGTTGGAACG +
Preference number: 5 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCALQDG*AEAVGT
Trigger: CGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGC...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CAA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCCTGCTTAGCCTGCGGTaGCCCTGCAGGATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCLLSLR*PCRMAW
Trigger: CCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCAG...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CAA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTCCTCCAGCAGGGCCTaGCTGCTTAGCCTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCSSSRA*LLSLRL
Trigger: CAACCGCAGGCTAAGCAGCAAGGCCCTGCTGGAGGA...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CAA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGAGTGCGCCACAAAGCTaGGGTGAGGGCACGGGGGAT +
Preference number: 5 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMSAPQS*GEGTGD
Trigger: ATCCCCCGTGCCCTCACCCAAGCTTTGTGGCGCACT...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CAA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAAACCCTGTGGCCCCGCTaGGAAGTCATGGTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQTLWPR*EVMVGR
Trigger: TCTCCCAACCATGACTTCCAAGCGGGGCCACAGGGT...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGAGGAGGACCTCCCTTTaGTGCGGGTCCAGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMRRTSL*CGSSLE
Trigger: CTCCAAGCTGGACCCGCACAAAAGGGAGGTCCTCCT...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000538145.5
CDS-3UTR CAA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGGCCCTGCAGGATGGCTaGGCGGAAGCTGTTGGAACG +
Preference number: 5 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLALQDG*AEAVGT
Trigger: CGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGC...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp AAGGACATTCAGCAACCACAGCACACCACGGTCTGCCACCTCTCACGGATGCCCTCCTCCAGCAGGGCCTaGCTGCTTAGCCTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: KDIQQPQHTTVCHLSRMPSSSRA*LLSLRL
Trigger: CAACCGCAGGCTAAGCAGCAAGGCCCTGCTGGAGGA...GGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTGTGGTTGCTGAATGTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCTCCTCCAGCAGGGCCTaGCTGCTTAGCCTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLSSSRA*LLSLRL
Trigger: CAACCGCAGGCTAAGCAGCAAGGCCCTGCTGGAGGA...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CAA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCGCTTGGAAGTCATGGTaGGGAGAGGGGATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCAWKSW*GEGMEV
Trigger: CACCTCCATCCCCTCTCCCAACCATGACTTCCAAGC...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCAGGACACGGCCAGCCTaGGCCATGGGGAAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVRTRPA*AMGKCC
Trigger: GCAGCACTTCCCCATGGCCAAGGCTGGCCGTGTCCT...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp GGCCACATGGCGGATAAGTCGCTGCGAGAGGCTCAGCCCCTTCTCCTCCAGCAGCTGTTGGAACGCTTGTaGCTCATCAGGCACAGGGAG +
Preference number: 5 (lower is better)
Translates to: GHMADKSLREAQPLLLQQLLERL*LIRHRE
Trigger: CTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAG...CTGCTGGAGGAGAAGGGGCTGAGCCTCTCGCAGCGACTTATCCGCCATGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS TCA 90 bp GGGTCAGCAGGGCACCACCTCCTCTTCACACTGATGTGGGTGCCCTaGTCTCCACCACTATTCACTGGCTTTAGTCCCCAGCCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GSAGHHLLFTLMWVP*SPPLFTGFSPQPLA
Trigger: TGCCAGGGGCTGGGGACTAAAGCCAGTGAATAGTGGTGGAGATCAGGGCACCCACATCAGTGTGAAGAGGAGGTGGTGCCCTGCTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582967.1
CDS-3UTR CAA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCTTGTGCGGGTCCAGCTaGGAGCTGTGGCTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLLCGSS*ELWLSR
Trigger: TCTGGAGAGCCACAGCTCCAAGCTGGACCCGCACAA...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000538145.5
CDS-3UTR CAA 90 bp CAATGTTGGCCAGATGGGCAGAGACGAGAGCATACACCCCTCCAGAAGAGCCCAGCCCTGCAGGATGGCTaGGCGGAAGCTGTTGGAACG +
Preference number: 5 (lower is better)
Translates to: QCWPDGQRREHTPLQKSPALQDG*AEAVGT
Trigger: CGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGC...TGGGCTCTTCTGGAGGGGTGTATGCTCTCGTCTCTGCCCATCTGGCCAACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CAA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCGCCATCCGCAGCAGCTaGAACTGGCACTTCATGCCT +
Preference number: 5 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCAIRSS*NWHFMP
Trigger: AGGCATGAAGTGCCAGTTCAAGCTGCTGCGGATGGC...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CAA 90 bp CGACTGGAGCGGTCATGTCAGCCACAGACACTGCCAAGGACCCTGCCACAACACGCCATCCGCAGCAGCTaGAACTGGCACTTCATGCCT +
Preference number: 5 (lower is better)
Translates to: RLERSCQPQTLPRTLPQHAIRSS*NWHFMP
Trigger: AGGCATGAAGTGCCAGTTCAAGCTGCTGCGGATGGC...GTGTTGTGGCAGGGTCCTTGGCAGTGTCTGTGGCTGACATGACCGCTCCAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CAA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAAAGCATCCAGGGATCCTaGGAGGGCTTGAGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKSIQGS*EGLSSP
Trigger: GGGAGAGCTCAAGCCCTCCAAGGATCCCTGGATGCT...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp AGGCAGAGGCAGCAATGTCCTGACTCCTTCTGCATCCTCCCCTGGTCTTCCCTGACCCTGTGGCCCCGCTaGGAAGTCATGGTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: RQRQQCPDSFCILPWSSLTLWPR*EVMVGR
Trigger: TCTCCCAACCATGACTTCCAAGCGGGGCCACAGGGT...CAGGGAAGACCAGGGGAGGATGCAGAAGGAGTCAGGACATTGCTGCCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp GCGGAGCCACACGGCCCGCCCAAACTCCATGCTCATACAGATAAGGGCCACAGCGCTTGGCGGAAGCTGTaGGAACGCTTGTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: AEPHGPPKLHAHTDKGHSAWRKL*ERLLLI
Trigger: GATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGC...GCTGTGGCCCTTATCTGTATGAGCATGGAGTTTGGGCGGGCCGTGTGGCTCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CAA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCGCTTGGCGGAAGCTGTaGGAACGCTTGTTGCTCATT +
Preference number: 5 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCAWRKL*ERLLLI
Trigger: AATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGC...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000538145.5
CDS-3UTR CAA 90 bp AGAGCCCACGACTGGAGCGGTCATGTCAGCCACAGACACTGCCAAGGACCCTGCAGCTGCAGCACCACATaGAGTCCCAGGTGTTCTATC +
Preference number: 5 (lower is better)
Translates to: RAHDWSGHVSHRHCQGPCSCSTT*SPRCSI
Trigger: GATAGAACACCTGGGACTCAATGTGGTGCTGCAGCT...GCAGGGTCCTTGGCAGTGTCTGTGGCTGACATGACCGCTCCAGTCGTGGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CAA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCCAGTTCATGACAATGTaGGCCAGATGGGCAGAGACG +
Preference number: 5 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCQFMTM*ARWAET
Trigger: CGTCTCTGCCCATCTGGCCAACATTGTCATGAACTG...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CAA 90 bp CTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGCCACATCAACTCGGATCCTTGGAGGGCTaGAGCTCTCCCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LARCHQSSREKRQQPHQLGSLEG*SSPSSR
Trigger: CCTGCTGGAGGGAGAGCTCAAGCCCTCCAAGGATCC...GAGTTGATGTGGCTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGAGCATCCAGGGATCCTaGGAGGGCTTGAGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: QTFTLARCHQSSREKRQQSIQGS*EGLSSP
Trigger: GGGAGAGCTCAAGCCCTCCAAGGATCCCTGGATGCT...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCCAGGCCTGGCGTTCTTaGTTCTTCTGGGCTGTCAGT +
Preference number: 5 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCQAWRS*FFWAVS
Trigger: ACTGACAGCCCAGAAGAACAAAGAACGCCAGGCCTG...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CAGCCTCTCTTGCGCCCCCAAAGCTCTTTCTCTCCTAAGGGAGATAGGATGGAACTGCTTAGCCTGCGGTaGCCCTGCAGGATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: QPLLRPQSSFSPKGDRMELLSLR*PCRMAW
Trigger: CCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCAG...TTCCATCCTATCTCCCTTAGGAGAGAAAGAGCTTTGGGGGCGCAAGAGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCAGCTGCAGCACCACATaGAGTCCCAGGTGTTCTATC +
Preference number: 5 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCSCSTT*SPRCSI
Trigger: GATAGAACACCTGGGACTCAATGTGGTGCTGCAGCT...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000536287.2
ENST00000538145.5
ENST00000578006.5
CDS-3UTR CAA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCGCCATCCGCAGCAGCTaGAACTGGCACTTCATGCCT +
Preference number: 5 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLIAIRSS*NWHFMP
Trigger: AGGCATGAAGTGCCAGTTCAAGCTGCTGCGGATGGC...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCCAGGCCTGGCGTTCTTaGTTCTTCTGGGCTGTCAGT +
Preference number: 5 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLQAWRS*FFWAVS
Trigger: ACTGACAGCCCAGAAGAACAAAGAACGCCAGGCCTG...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS TCA 90 bp CCGCCTCCTCTCACCATGGAGAGGGAAGTGCGAATGAAAAGGCAATaGGTGCAGGAAGATGAGAAACTTCTGGGGCCTGGGACGGGTGAG +
Preference number: 5 (lower is better)
Translates to: PPPLTMEREVRMKRQ*VQEDEKLLGPGTGE
Trigger: CTCACCCGTCCCAGGCCCCAGAAGTTTCTCATCTTCCTGCACTCATTGCCTTTTCATTCGCACTTCCCTCTCCATGGTGAGAGGAGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582967.1
CDS CCA 90 bp AGCAGGGCCTTGCTGCTTAGCCTGCGGTTGCCCTGCAGGATGGCTTaGCGGAAGCTGTTGGAACGCTTGTTGCTCATTAGGCTGACAAAA +
Preference number: 5 (lower is better)
Translates to: SRALLLSLRLPCRMA*RKLLERLLLIRLTK
Trigger: TTTTGTCAGCCTAATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCAGCAAGGCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000431505.6
ENST00000538145.5
ENST00000582967.1
CDS-3UTR CAA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCGCTTGGCGGAAGCTGTaGGAACGCTTGTTGCTCATT +
Preference number: 5 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLAWRKL*ERLLLI
Trigger: AATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGC...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000538145.5
CDS-3UTR CAA 90 bp AAGGACATTCAGCAACCACAGCACACCACGGTCTGCCACCTCTCACGGATGCCCCAGTTCATGACAATGTaGGCCAGATGGGCAGAGACG +
Preference number: 5 (lower is better)
Translates to: KDIQQPQHTTVCHLSRMPQFMTM*ARWAET
Trigger: CGTCTCTGCCCATCTGGCCAACATTGTCATGAACTG...GGGCATCCGTGAGAGGTGGCAGACCGTGGTGTGCTGTGGTTGCTGAATGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp GCCAGCACGGGGAGCAACATGAATGATGCCAGGAAAGGCTTTCACGGCACCCAGCAGTTCATGACAATGTaGGCCAGATGGGCAGAGACG +
Preference number: 5 (lower is better)
Translates to: ASTGSNMNDARKGFHGTQQFMTM*ARWAET
Trigger: CGTCTCTGCCCATCTGGCCAACATTGTCATGAACTG...CTGGGTGCCGTGAAAGCCTTTCCTGGCATCATTCATGTTGCTCCCCGTGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp AACCAGCAATCACAGTTCAGAGTGATGGTTGCTGTGGGAGCACACAAGAGGGAGAGTGCGCCACAAAGCTaGGGTGAGGGCACGGGGGAT +
Preference number: 5 (lower is better)
Translates to: NQQSQFRVMVAVGAHKRESAPQS*GEGTGD
Trigger: ATCCCCCGTGCCCTCACCCAAGCTTTGTGGCGCACT...CTCCCTCTTGTGTGCTCCCACAGCAACCATCACTCTGAACTGTGATTGCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CAA 90 bp CAGACCTTCACCCTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGTGTAGACGAGGGTCCTaGGCAGCAGAGGACACACTT +
Preference number: 5 (lower is better)
Translates to: QTFTLARCHQSSREKRQQCRRGS*AAEDTL
Trigger: AAGTGTGTCCTCTGCTGCCAAGGACCCTCGTCTACA...CTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAGGGTGAAGGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCAGGGGCAGTTCACTGTaGGGCACTGTTTTTAAGGCA +
Preference number: 5 (lower is better)
Translates to: LAELVMRRNLAGAPCGCCRGSSL*GTVFKA
Trigger: TGCCTTAAAAACAGTGCCCAACAGTGAACTGCCCCT...GCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CAGTGGCCCAGAGTCTTCTGTCCTTGTCTGCCCGGCCTAGCTGAGCTGGTGATGAAGCTGTTGGAACGCTaGTTGCTCATTAGGCTGACA +
Preference number: 5 (lower is better)
Translates to: QWPRVFCPCLPGLAELVMKLLER*LLIRLT
Trigger: TGTCAGCCTAATGAGCAACAAGCGTTCCAACAGCTT...CATCACCAGCTCAGCTAGGCCGGGCAGACAAGGACAGAAGACTCTGGGCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000538145.5
CDS-3UTR CAA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCTCCTCCAGCAGGGCCTaGCTGCTTAGCCTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: MMPGKAFTAPRESALRICSSSRA*LLSLRL
Trigger: CAACCGCAGGCTAAGCAGCAAGGCCCTGCTGGAGGA...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp GCCAGGACAGGAATCTGGAGGGGATTCTCCATCCCTCCAGGAAAGGACCTCATCAGCTGCAGCACCACATaGAGTCCCAGGTGTTCTATC +
Preference number: 5 (lower is better)
Translates to: ARTGIWRGFSIPPGKDLISCSTT*SPRCSI
Trigger: GATAGAACACCTGGGACTCAATGTGGTGCTGCAGCT...GATGAGGTCCTTTCCTGGAGGGATGGAGAATCCCCTCCAGATTCCTGTCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp GGAAGCTGTTGGAACGCTTGTTGCTCATCAGGCACAGGGAGGGATACGGTGGTGCAGTTCATGACAATGTaGGCCAGATGGGCAGAGACG +
Preference number: 5 (lower is better)
Translates to: GSCWNACCSSGTGRDTVVQFMTM*ARWAET
Trigger: CGTCTCTGCCCATCTGGCCAACATTGTCATGAACTG...CACCACCGTATCCCTCCCTGTGCCTGATGAGCAACAAGCGTTCCAACAGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578006.5
CDS-3UTR CAA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCAGTGCGCCACAAAGCTaGGGTGAGGGCACGGGGGAT +
Preference number: 5 (lower is better)
Translates to: MMPGKAFTAPRESALRICSAPQS*GEGTGD
Trigger: ATCCCCCGTGCCCTCACCCAAGCTTTGTGGCGCACT...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS CCA 90 bp TGGATGAGTTACCTCCAGCAGCGTGACTGTGATCATGAACCAGGGTaGGGGGCAGCAGGTGTAGCTGTCATAGTACCACTTGCGGTCAAT +
Preference number: 5 (lower is better)
Translates to: WMSYLQQRDCDHEPG*GAAGVAVIVPLAVN
Trigger: ATTGACCGCAAGTGGTACTATGACAGCTACACCTGCTGCCCCCCACCCTGGTTCATGATCACAGTCACGCTGCTGGAGGTAACTCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582967.1
CDS-3UTR CAA 90 bp GAGTCTATGGCTGCTGTTTGGGGATTCCCCAGCTTTCAGTTTCTGTATCCTGTGTTGTGCGGGTCCAGCTaGGAGCTGTGGCTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ESMAAVWGFPSFQFLYPVLCGSS*ELWLSR
Trigger: TCTGGAGAGCCACAGCTCCAAGCTGGACCCGCACAA...CACAGGATACAGAAACTGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR CAA 90 bp CTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCTGCTTTTCCCTCAAGCTGTTGGAACGCTaGTTGCTCATTAGGCTGACA +
Preference number: 5 (lower is better)
Translates to: LVMRRNLAGAPCGCCFSLKLLER*LLIRLT
Trigger: TGTCAGCCTAATGAGCAACAAGCGTTCCAACAGCTT...GAGGGAAAAGCAGCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000538145.5
CDS-3UTR CAA 90 bp GGCCTAGCTGAGCTGGTGATGAGAAGAAACCTCGCAGGCGCTCCCTGTGGGTGCGTCATTCCCTCCATCTaGTTTTCTCACCTGTGTAAT +
Preference number: 5 (lower is better)
Translates to: GLAELVMRRNLAGAPCGCVIPSI*FSHLCN
Trigger: ATTACACAGGTGAGAAAACAAGATGGAGGGAATGAC...GCACCCACAGGGAGCGCCTGCGAGGTTTCTTCTCATCACCAGCTCAGCTAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAAGTCATTCCCTCCATCTaGTTTTCTCACCTGTGTAAT +
Preference number: 5 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQVIPSI*FSHLCN
Trigger: ATTACACAGGTGAGAAAACAAGATGGAGGGAATGAC...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp AGGAAGGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCATGTAGACGAGGGTCCTaGGCAGCAGAGGACACACTT +
Preference number: 5 (lower is better)
Translates to: RKGAGFVKARTFSNHSTPCRRGS*AAEDTL
Trigger: AAGTGTGTCCTCTGCTGCCAAGGACCCTCGTCTACA...TGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp GCTCCCTGCTCTGCCCAACCCAGGCACAACAGATCATGCCCCGGTGCACACCAATATTTGCAAATTAAATaGGACGCTGGGGGAAGATCC +
Preference number: 5 (lower is better)
Translates to: APCSAQPRHNRSCPGAHQYLQIK*DAGGRS
Trigger: GGATCTTCCCCCAGCGTCCAATTTAATTTGCAAATA...TTGGTGTGCACCGGGGCATGATCTGTTGTGCCTGGGTTGGGCAGAGCAGGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CTGGCCCGATGTCATCAGAGCAGCCGAGAAAAACGACAGCAGCCACATCAACTCTGGGGTGGGGTGGATTaGATAACCACCATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LARCHQSSREKRQQPHQLWGGVD*ITTMFS
Trigger: AGAGAACATGGTGGTTATCAAATCCACCCCACCCCA...GAGTTGATGTGGCTGCTGTCGTTTTTCTCGGCTGCTCTGATGACATCGGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp AAAAACGACAGCAGCCACATCAACTCCTCCGCCAGATGCCTTTCAGAAAAGGGTGCTTGGAAGTCATGGTaGGGAGAGGGGATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: KNDSSHINSSARCLSEKGAWKSW*GEGMEV
Trigger: CACCTCCATCCCCTCTCCCAACCATGACTTCCAAGC...ACCCTTTTCTGAAAGGCATCTGGCGGAGGAGTTGATGTGGCTGCTGTCGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS TCA 90 bp GAGAGGTTAAACCGCCTCCTCTCACCATGGAGAGGGAAGTGCGAATaGAAAGGCAATGAGTGCAGGAAGATGAGAAACTTCTGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: ERLNRLLSPWRGKCE*KGNECRKMRNFWGL
Trigger: CAGGCCCCAGAAGTTTCTCATCTTCCTGCACTCATTGCCTTTTCATTCGCACTTCCCTCTCCATGGTGAGAGGAGGCGGTTTAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582967.1
CDS-3UTR CAA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCCTGTTGGAACGCTTGTaGCTCATTAGGCTGACAAAA +
Preference number: 5 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVLLERL*LIRLTK
Trigger: TTTTGTCAGCCTAATGAGCAACAAGCGTTCCAACAG...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269051.9
CDS-3UTR CAA 90 bp GGCTGGGCATGGAGGCTGGGGCACCCGTGTGAGATGCCAATATCCTGGAAGAAATTCTCCTTTGAAGGTTaGTTTTCCCTTCCCCAGTTT +
Preference number: 5 (lower is better)
Translates to: GWAWRLGHPCEMPISWKKFSFEG*FSLPQF
Trigger: AAACTGGGGAAGGGAAAACAAACCTTCAAAGGAGAA...TTTCTTCCAGGATATTGGCATCTCACACGGGTGCCCCAGCCTCCATGCCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCAGCTGCAGCACCACATaGAGTCCCAGGTGTTCTATC +
Preference number: 5 (lower is better)
Translates to: MMPGKAFTAPRESALRICSCSTT*SPRCSI
Trigger: GATAGAACACCTGGGACTCAATGTGGTGCTGCAGCT...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp ACATGTCCAGTAGGCCCTCTTCTTACTGGAGCCCCAGACACAGCAGGTGTCAAGAGGGAGTGTCATCTTTaGTCAAAGGTCATCCTCATG +
Preference number: 5 (lower is better)
Translates to: TCPVGPLLTGAPDTAGVKRECHL*SKVILM
Trigger: CATGAGGATGACCTTTGACAAAAGATGACACTCCCT...CTTGACACCTGCTGTGTCTGGGGCTCCAGTAAGAAGAGGGCCTACTGGACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAAAGGACACGGCCAGCCTaGGCCATGGGGAAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKRTRPA*AMGKCC
Trigger: GCAGCACTTCCCCATGGCCAAGGCTGGCCGTGTCCT...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp ATGATGCCAGGAAAGGCTTTCACGGCACCCAGGGAATCTGCATTACGTATTTGCGTCTATGGCTGCTGTTaGGGGATTCCCCAGCTTTCA +
Preference number: 5 (lower is better)
Translates to: MMPGKAFTAPRESALRICVYGCC*GIPQLS
Trigger: TGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGAC...GCAAATACGTAATGCAGATTCCCTGGGTGCCGTGAAAGCCTTTCCTGGCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp GGGGGCAGGCTTTGTCAAAGCAAGGACATTCAGCAACCACAGCACACCACGGTCTATTTGCAAATTAAATaGGACGCTGGGGGAAGATCC +
Preference number: 5 (lower is better)
Translates to: GGRLCQSKDIQQPQHTTVYLQIK*DAGGRS
Trigger: GGATCTTCCCCCAGCGTCCAATTTAATTTGCAAATA...GACCGTGGTGTGCTGTGGTTGCTGAATGTCCTTGCTTTGACAAAGCCTGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTAGGGGCAGTTCACTGTaGGGCACTGTTTTTAAGGCA +
Preference number: 5 (lower is better)
Translates to: RGAGPRELHMWMRPGQSIRGSSL*GTVFKA
Trigger: TGCCTTAAAAACAGTGCCCAACAGTGAACTGCCCCT...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp GGGCTGTCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGCTTGGCGGAAGCTGTaGGAACGCTTGTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: GLSVVENSKSTIKGVSSFAWRKL*ERLLLI
Trigger: GATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGC...AAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536287.2
CDS-3UTR CAA 90 bp AGGGGAGCAGGACCTAGGGAACTACATATGTGGATGAGGCCAGGGCAATCTATTAGGGAGTGTCATCTTTaGTCAAAGGTCATCCTCATG +
Preference number: 5 (lower is better)
Translates to: RGAGPRELHMWMRPGQSIRECHL*SKVILM
Trigger: CATGAGGATGACCTTTGACAAAAGATGACACTCCCT...AATAGATTGCCCTGGCCTCATCCACATATGTAGTTCCCTAGGTCCTGCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp CAGCCTCTCTTGCGCCCCCAAAGCTCTTTCTCTCCTAAGGGAGATAGGATGGAATTCTCCTTTGAAGGTTaGTTTTCCCTTCCCCAGTTT +
Preference number: 5 (lower is better)
Translates to: QPLLRPQSSFSPKGDRMEFSFEG*FSLPQF
Trigger: AAACTGGGGAAGGGAAAACAAACCTTCAAAGGAGAA...TTCCATCCTATCTCCCTTAGGAGAGAAAGAGCTTTGGGGGCGCAAGAGAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAAGTCTATGGCTGCTGTTaGGGGATTCCCCAGCTTTCA +
Preference number: 5 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKVYGCC*GIPQLS
Trigger: TGAAAGCTGGGGAATCCCCAAACAGCAGCCATAGAC...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS-3UTR CAA 90 bp TCAGTGGTTGAGAATTCCAAGAGCACGATAAAGGGAGTGTCATCTTTTGTCAAATGGGGTGGGGTGGATTaGATAACCACCATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: SVVENSKSTIKGVSSFVKWGGVD*ITTMFS
Trigger: AGAGAACATGGTGGTTATCAAATCCACCCCACCCCA...TTTGACAAAAGATGACACTCCCTTTATCGTGCTCTTGGAATTCTCAACCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269051.9
ENST00000536287.2
CDS GCA 72 bp GCAGCCGCTCCTCGGCCTCGGGTTCCAGCTCCTCGATaGGCTCCGCCTCGGCGCAGGCGGCCACCGCGGGGC +
Preference number: 6 (lower is better)
Translates to: AAAPRPRVPAPR*APPRRRRPPRG
Trigger: GCCCCGCGGTGGCCGCCTGCGCCGAGGCGGAGCGCATCGAGGAGCTGGAACCCGAGGCCGAGGAGCGGCTGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000431505.6
ENST00000538145.5
ENST00000578006.5
CDS GCA 72 bp ATGCCAGAGGGCCCTGGGGAGCAAGAAGCACTGCCTTaGAAGTCCTTCTGCCCCTGGCCGCCCTCCCATGGC +
Preference number: 6 (lower is better)
Translates to: MPEGPGEQEALP*KSFCPWPPSHG
Trigger: GCCATGGGAGGGCGGCCAGGGGCAGAAGGACTTGCAAGGCAGTGCTTCTTGCTCCCCAGGGCCCTCTGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582967.1
CDS CAA 90 bp TGCCCATCCGCGTGGCTGTCGGCAAGAGCCAGGAGGACCTCCCTTTaGTGCGGGTCCAGCTTGGAGCTGTGGCTCTCCAGAAGACTCCGG +
Preference number: 6 (lower is better)
Translates to: CPSAWLSARARRTSL*CGSSLELWLSRRLR
Trigger: CCGGAGTCTTCTGGAGAGCCACAGCTCCAAGCTGGACCCGCACAAAAGGGAGGTCCTCCTGGCTCTTGCCGACAGCCACGCGGATGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000431505.6
ENST00000538145.5
ENST00000582967.1
CDS CAA 72 bp GCGTGGCTGTCGGCAAGAGCCAGGAGGACCTCCCTTTaGTGCGGGTCCAGCTTGGAGCTGTGGCTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: AWLSARARRTSL*CGSSLELWLSR
Trigger: TCTGGAGAGCCACAGCTCCAAGCTGGACCCGCACAAAAGGGAGGTCCTCCTGGCTCTTGCCGACAGCCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000431505.6
ENST00000538145.5
ENST00000582967.1
CDS GCA 72 bp TGGCTGTCGGCAAGAGCCAGGAGGACCTCCCTTTTGTaGGGGTCCAGCTTGGAGCTGTGGCTCTCCAGAAGA +
Preference number: 6 (lower is better)
Translates to: WLSARARRTSLL*GSSLELWLSRR
Trigger: TCTTCTGGAGAGCCACAGCTCCAAGCTGGACCCGCACAAAAGGGAGGTCCTCCTGGCTCTTGCCGACAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000431505.6
ENST00000538145.5
ENST00000582967.1
CDS CCA 72 bp GAGCCAGGAGGACCTCCCTTTTGTGCGGGTCCAGCTTaGAGCTGTGGCTCTCCAGAAGACTCCGGAACTTGC +
Preference number: 6 (lower is better)
Translates to: EPGGPPFCAGPA*SCGSPEDSGTC
Trigger: GCAAGTTCCGGAGTCTTCTGGAGAGCCACAGCTCCAAGCTGGACCCGCACAAAAGGGAGGTCCTCCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000431505.6
ENST00000538145.5
ENST00000582967.1
CDS CAA 90 bp CTGTCGGCAAGAGCCAGGAGGACCTCCCTTTTGTGCGGGTCCAGCTaGGAGCTGTGGCTCTCCAGAAGACTCCGGAACTTGCCTGTGCTA +
Preference number: 6 (lower is better)
Translates to: LSARARRTSLLCGSS*ELWLSRRLRNLPVL
Trigger: TAGCACAGGCAAGTTCCGGAGTCTTCTGGAGAGCCACAGCTCCAAGCTGGACCCGCACAAAAGGGAGGTCCTCCTGGCTCTTGCCGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000431505.6
ENST00000538145.5
ENST00000582967.1
CDS CCA 72 bp AGGACCTCCCTTTTGTGCGGGTCCAGCTTGGAGCTGTaGCTCTCCAGAAGACTCCGGAACTTGCCTGTGCTA +
Preference number: 6 (lower is better)
Translates to: RTSLLCGSSLEL*LSRRLRNLPVL
Trigger: TAGCACAGGCAAGTTCCGGAGTCTTCTGGAGAGCCACAGCTCCAAGCTGGACCCGCACAAAAGGGAGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000431505.6
ENST00000538145.5
ENST00000582967.1
CDS CCA 72 bp TTGCTGCTTAGCCTGCGGTTGCCCTGCAGGATGGCTTaGCGGAAGCTGTTGGAACGCTTGTTGCTCATTAGG +
Preference number: 6 (lower is better)
Translates to: LLLSLRLPCRMA*RKLLERLLLIR
Trigger: CCTAATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCAGGCTAAGCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000431505.6
ENST00000538145.5
ENST00000582967.1
CDS CCA 72 bp CTCCACCACTATTCACTGGCTTTAGTCCCCAGCCCCTaGCAGAGGCTCAGTGTCTGGGAGATTTCCAAGGAC +
Preference number: 6 (lower is better)
Translates to: LHHYSLALVPSP*QRLSVWEISKD
Trigger: GTCCTTGGAAATCTCCCAGACACTGAGCCTCTGCCAGGGGCTGGGGACTAAAGCCAGTGAATAGTGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582967.1
CDS CAA 72 bp CTGCGGTTGCCCTGCAGGATGGCTTGGCGGAAGCTGTaGGAACGCTTGTTGCTCATTAGGCTGACAAAATCC +
Preference number: 6 (lower is better)
Translates to: LRLPCRMAWRKL*ERLLLIRLTKS
Trigger: GGATTTTGTCAGCCTAATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269051.9
ENST00000431505.6
ENST00000538145.5
ENST00000582967.1
CDS CCA 72 bp TGCGGTTGCCCTGCAGGATGGCTTGGCGGAAGCTGTTaGAACGCTTGTTGCTCATCTGATCAAACAGGACTT +
Preference number: 6 (lower is better)
Translates to: CGCPAGWLGGSC*NACCSSDQTGL
Trigger: AAGTCCTGTTTGATCAGATGAGCAACAAGCGTTCCAACAGCTTCCGCCAAGCCATCCTGCAGGGCAACCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536287.2