RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RGS6 (Homo sapiens)

Ensembl gene IDs: ENSG00000182732

Ensembl transcript IDs: ENST00000343854.10, ENST00000355512.10, ENST00000402788.6, ENST00000404301.6, ENST00000406236.8, ENST00000407322.8, ENST00000434263.6, ENST00000553519.1, ENST00000553525.6, ENST00000553530.5, ENST00000553690.5, ENST00000554300.1, ENST00000554474.5, ENST00000554734.1, ENST00000554782.1, ENST00000555368.5, ENST00000555571.5, ENST00000556437.5, ENST00000622468.4

Found 1810 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGCCGCCGCCTGCCTGTGGGGTCCGCGGGCCCAGGCCCTGGACCTaGGGTAGGAACGGTCAGGAGGACTGCATCAGGCCCGTGAGGCGC +
Preference number: 1 (lower is better)
Translates to: APPPACGVRGPRPWT*GRNGQEDCIRPVRR
Trigger: GCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTTCCTACCGCAGGTCCAGGGCCTGGGCCCGCGGACCCCACAGGCAGGCGGCGGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554474.5
3UTR GCA 90 bp CGCGGGCCCAGGCCCTGGACCTGCGGTAGGAACGGTCAGGAGGACTaGATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCCCAC +
Preference number: 1 (lower is better)
Translates to: RGPRPWTCGRNGQED*IRPVRRLPASDFPH
Trigger: GTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTTCCTACCGCAGGTCCAGGGCCTGGGCCCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554474.5
3UTR TCA 90 bp GGACCTGAGGGCAGCCACCGGGCTGGCGGGGACCTCTCCGAACGCTaGTCTCAAAGAGGGTGGAAAGACCTTGAGGCGGGGCAATCCGTG +
Preference number: 1 (lower is better)
Translates to: GPEGSHRAGGDLSER*SQRGWKDLEAGQSV
Trigger: CACGGATTGCCCCGCCTCAAGGTCTTTCCACCCTCTTTGAGATCAGCGTTCGGAGAGGTCCCCGCCAGCCCGGTGGCTGCCCTCAGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 90 bp CAGTGCTTCCTCGAACGCTGGACCCTTGAGACATGTGACGGGACCTaGGGGCAGCCACCGGGCTGGCGGGGACCTCTCCGAACGCTGATC +
Preference number: 1 (lower is better)
Translates to: QCFLERWTLETCDGT*GQPPGWRGPLRTLI
Trigger: GATCAGCGTTCGGAGAGGTCCCCGCCAGCCCGGTGGCTGCCCTCAGGTCCCGTCACATGTCTCAAGGGTCCAGCGTTCGAGGAAGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 90 bp CCTGGACCTGCGGTAGGAACGGTCAGGAGGACTGCATCAGGCCCGTaGGGCGCTTGCCCGCCAGCGACTTTCCCCACTGCTGGAAGGAAG +
Preference number: 1 (lower is better)
Translates to: PGPAVGTVRRTASGP*GACPPATFPTAGRK
Trigger: CTTCCTTCCAGCAGTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTTCCTACCGCAGGTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554474.5
3UTR TCA 90 bp ACTCAGAGTCGCAAGAGGTCCCTCCCAGGATGCTGGCCCGGTACCTaGCCACTTAGCGGTGGTGAGCCTGGAGCGCAGGCCCAGCTGACT +
Preference number: 1 (lower is better)
Translates to: TQSRKRSLPGCWPGT*PLSGGEPGAQAQLT
Trigger: AGTCAGCTGGGCCTGCGCTCCAGGCTCACCACCGCTAAGTGGTCAGGTACCGGGCCAGCATCCTGGGAGGGACCTCTTGCGACTCTGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 90 bp ATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCCCACTGCTaGAAGGAAGCCACCTCGGGGGTGAAATGCAGCGGCCATTCTGAC +
Preference number: 1 (lower is better)
Translates to: IRPVRRLPASDFPHC*KEATSGVKCSGHSD
Trigger: GTCAGAATGGCCGCTGCATTTCACCCCCGAGGTGGCTTCCTTCCAGCAGTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554474.5
3UTR TCA 90 bp GCAGTGCCTGGTGCTGGCAGTGACACCCGGGTGGCCACAGAGACGTaGGGGATGACAGGCGGCGGTGGGGATGTAGTGGCTGTAACTATG +
Preference number: 1 (lower is better)
Translates to: AVPGAGSDTRVATET*GMTGGGGDVVAVTM
Trigger: CATAGTTACAGCCACTACATCCCCACCGCCGCCTGTCATCCCTCACGTCTCTGTGGCCACCCGGGTGTCACTGCCAGCACCAGGCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 90 bp GGAGGAGAGCCCTGTGGCCTGGCCTGGTCCCTTCGTAGCATACTCTaGCCCAGCTTCACACACAAAGGAGACCTGACCCAGCAAGGGTCT +
Preference number: 1 (lower is better)
Translates to: GGEPCGLAWSLRSIL*PSFTHKGDLTQQGS
Trigger: AGACCCTTGCTGGGTCAGGTCTCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCCACAGGGCTCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 90 bp AATGCCCGCGATGGCACTGCTGTGAGGGACAGAAGGCTGGTGCCCTaGGGACAGGGCTGTGTGGAAGCAGACATAGACAGGACTTGGAGG +
Preference number: 1 (lower is better)
Translates to: NARDGTAVRDRRLVP*GQGCVEADIDRTWR
Trigger: CCTCCAAGTCCTGTCTATGTCTGCTTCCACACAGCCCTGTCCCCAGGGCACCAGCCTTCTGTCCCTCACAGCAGTGCCATCGCGGGCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 90 bp AGGGGGCCAGTTGGGTGGCAGGCTCCTGGTTCAGCGTCCTGTTGGTaGGGTAGTTTGAAATCCCAGGAATCCTGCCAGGGAAGAAGCCCC +
Preference number: 1 (lower is better)
Translates to: RGPVGWQAPGSASCW*GSLKSQESCQGRSP
Trigger: GGGGCTTCTTCCCTGGCAGGATTCCTGGGATTTCAAACTACCTCACCAACAGGACGCTGAACCAGGAGCCTGCCACCCAACTGGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 90 bp AAGAAGCCCCTGGAGCATGTCCCCATGTGTTCAGCTAGTCCAAGCTaGAACTCAGAGTCGCAAGAGGTCCCTCCCAGGATGCTGGCCCGG +
Preference number: 1 (lower is better)
Translates to: KKPLEHVPMCSASPS*NSESQEVPPRMLAR
Trigger: CCGGGCCAGCATCCTGGGAGGGACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATGCTCCAGGGGCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 90 bp GATGACAGGCGGCGGTGGGGATGTAGTGGCTGTAACTATGGGAGGTaGCAGGGAGGTGATGCAAATGCTGGATGTGCTCTCGGTCCACTC +
Preference number: 1 (lower is better)
Translates to: DDRRRWGCSGCNYGR*QGGDANAGCALGPL
Trigger: GAGTGGACCGAGAGCACATCCAGCATTTGCATCACCTCCCTGGCACCTCCCATAGTTACAGCCACTACATCCCCACCGCCGCCTGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 90 bp CCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAGACCTaGCCCAGCAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGT +
Preference number: 1 (lower is better)
Translates to: PFVAYSAPASHTKET*PSKGLTVPVRMPPR
Trigger: ACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTGCTGGGTCAGGTCTCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 90 bp CTCCTCCCCAGCCCAGAGAGTTCCTGCTGCTTAGTTCAGGCCATCTaGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCT +
Preference number: 1 (lower is better)
Translates to: LLPSPESSCCLVQAI*LRLDVYMCQPTSFP
Trigger: AGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTCTGGGCTGGGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 90 bp GCCAGGGAGGTGATGCAAATGCTGGATGTGCTCTCGGTCCACTCATaGCTCTTGAATTTGCCAGAAGGTGTGACCGTCTCCAGACAGCGA +
Preference number: 1 (lower is better)
Translates to: AREVMQMLDVLSVHS*LLNLPEGVTVSRQR
Trigger: TCGCTGTCTGGAGACGGTCACACCTTCTGGCAAATTCAAGAGGCATGAGTGGACCGAGAGCACATCCAGCATTTGCATCACCTCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 90 bp TCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGC +
Preference number: 1 (lower is better)
Translates to: SPPSPFIALTLSPSQ*PSLLVRKLCPQMWS
Trigger: GCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR TCA 90 bp TCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTaGATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAA +
Preference number: 1 (lower is better)
Translates to: SQVIVVTGTPRRVLP*MSWDQGLLASGVLE
Trigger: TTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR GCA 90 bp TCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATTCTaGAGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTG +
Preference number: 1 (lower is better)
Translates to: SQLLDLAATPPSNTF*RAQRKRALNPFPLL
Trigger: CAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCTGCAGAATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 90 bp ACCTTGGATAGGCAGCCTCGTTCCACTCCCTTCTTGCAAAGCTTCTaGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGG +
Preference number: 1 (lower is better)
Translates to: TLDRQPRSTPFLQSF*LDLLGNMSALAVGW
Trigger: CCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCTTTGCAAGAAGGGAGTGGAACGAGGCTGCCTATCCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 90 bp CAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACTTaGATGACCAAGTTCTGCGTGGTAGATGGACCTTGGATAGGCAGC +
Preference number: 1 (lower is better)
Translates to: QANGGRAKTRFSKCT*MTKFCVVDGPWIGS
Trigger: GCTGCCTATCCAAGGTCCATCTACCACGCAGAACTTGGTCATGCAAGTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 90 bp GCTACTTTATGGCCCCTGGGTCTAGCCCAGGGGATGCCTTATCACTaGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATG +
Preference number: 1 (lower is better)
Translates to: ATLWPLGLAQGMPYH*VVLMSRLLASAVAM
Trigger: CATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCAGTGATAAGGCATCCCCTGGGCTAGACCCAGGGGCCATAAAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 90 bp GCACCCAGGAGGCCGGGTCTGCAAATAAGCAAGCATCTGAGCCTTTaGTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCA +
Preference number: 1 (lower is better)
Translates to: APRRPGLQISKHLSL*SPAGEFGCMRKEIP
Trigger: TGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTTGCTTATTTGCAGACCCGGCCTCCTGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 90 bp ATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTCTCTaGTTTCCACTGTACCTCCAAGAGAGGAACCATTGCCAGTGGGGG +
Preference number: 1 (lower is better)
Translates to: IAASETLRTQHLSSL*FPLYLQERNHCQWG
Trigger: CCCCCACTGGCAATGGTTCCTCTCTTGGAGGTACAGTGGAAACCAGAGAGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 90 bp CTCTGTGCTGAGCATGTGCAGGTGTCCAGCAAGAATTGCTGCCTCTaGGACACTGAGGACTCAACATCTGTCATCTCTCTGGTTTCCACT +
Preference number: 1 (lower is better)
Translates to: LCAEHVQVSSKNCCL*DTEDSTSVISLVST
Trigger: AGTGGAAACCAGAGAGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACACCTGCACATGCTCAGCACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 90 bp CTGTCATCTCTCTGGTTTCCACTGTACCTCCAAGAGAGGAACCATTaGCAGTGGGGGAAACTTGGGCATGGTAGTCAAGAACTCACAAGG +
Preference number: 1 (lower is better)
Translates to: LSSLWFPLYLQERNH*QWGKLGHGSQELTR
Trigger: CCTTGTGAGTTCTTGACTACCATGCCCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTGGAGGTACAGTGGAAACCAGAGAGATGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 90 bp TCCAAATGTACTTGCATGACCAAGTTCTGCGTGGTAGATGGACCTTaGATAGGCAGCCTCGTTCCACTCCCTTCTTGCAAAGCTTCTGGC +
Preference number: 1 (lower is better)
Translates to: SKCTCMTKFCVVDGP*IGSLVPLPSCKASG
Trigger: GCCAGAAGCTTTGCAAGAAGGGAGTGGAACGAGGCTGCCTATCCAAGGTCCATCTACCACGCAGAACTTGGTCATGCAAGTACATTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 90 bp TGGAAAGACCTTGAGGCGGGGCAATCCGTGAGGTTGCTTTCTTGCTaGAGATGTGATTTGGACATTTTACGTGAAAGCAGTGCCTGGTGC +
Preference number: 1 (lower is better)
Translates to: WKDLEAGQSVRLLSC*RCDLDILRESSAWC
Trigger: GCACCAGGCACTGCTTTCACGTAAAATGTCCAAATCACATCTTCAGCAAGAAAGCAACCTCACGGATTGCCCCGCCTCAAGGTCTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 90 bp ACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTaGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAAC +
Preference number: 1 (lower is better)
Translates to: TCSPLNELGSGPLSE*SVGIQLYKEERAVN
Trigger: GTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR TCA 90 bp GCTGATCTCAAAGAGGGTGGAAAGACCTTGAGGCGGGGCAATCCGTaGGGTTGCTTTCTTGCTGAAGATGTGATTTGGACATTTTACGTG +
Preference number: 1 (lower is better)
Translates to: ADLKEGGKTLRRGNP*GCFLAEDVIWTFYV
Trigger: CACGTAAAATGTCCAAATCACATCTTCAGCAAGAAAGCAACCTCACGGATTGCCCCGCCTCAAGGTCTTTCCACCCTCTTTGAGATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 90 bp GCTATGGTTACACGAGCACAGGCCTCTCTTCAGAGGGTCCCATGGTaGGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATG +
Preference number: 1 (lower is better)
Translates to: AMVTRAQASLQRVPW*VISDSSGHYSTYPM
Trigger: CATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACCATGGGACCCTCTGAAGAGAGGCCTGTGCTCGTGTAACCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 90 bp TCTCTCTGGTTTCCACTGTACCTCCAAGAGAGGAACCATTGCCAGTaGGGGAAACTTGGGCATGGTAGTCAAGAACTCACAAGGATACAA +
Preference number: 1 (lower is better)
Translates to: SLWFPLYLQERNHCQ*GKLGHGSQELTRIQ
Trigger: TTGTATCCTTGTGAGTTCTTGACTACCATGCCCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTGGAGGTACAGTGGAAACCAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 90 bp AGTATTAGCTACCGTTTGCTAAGCACCTACTGCGTATCAGGCACCTaGCTCGGTGCTTTACATACATTACCTCACAGCCAGGTTGGCAAA +
Preference number: 1 (lower is better)
Translates to: SISYRLLSTYCVSGT*LGALHTLPHSQVGK
Trigger: TTTGCCAACCTGGCTGTGAGGTAATGTATGTAAAGCACCGAGTCAGGTGCCTGATACGCAGTAGGTGCTTAGCAAACGGTAGCTAATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 90 bp GAATTTGCTTTGCTACAGAATTGCCTGCAAACATCTAATCTAGTCTaGATTTTTGGCTGTGTAGACCAGGCCAATGGGGGACGGGCCAAG +
Preference number: 1 (lower is better)
Translates to: EFALLQNCLQTSNLV*IFGCVDQANGGRAK
Trigger: CTTGGCCCGTCCCCCATTGGCCTGGTCTACACAGCCAAAAATTCAGACTAGATTAGATGTTTGCAGGCAATTCTGTAGCAAAGCAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 90 bp TTAACCAGGACAGAGCACGTATCAGAATTCCCCCACCACTTTTGCTaGAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCC +
Preference number: 1 (lower is better)
Translates to: LTRTEHVSEFPHHFC*RRLQGWVKCCLGCS
Trigger: GGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGCTCTGTCCTGGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
3UTR CCA 90 bp GTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTaGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGTGT +
Preference number: 1 (lower is better)
Translates to: VSEFPHHFCCRRLQG*VKCCLGCSISISQC
Trigger: ACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
3UTR GCA 90 bp ATAAGCAAGCATCTGAGCCTTTGGTCACCAGCTGGCGAATTTGGCTaGATGAGAAAAGAAATACCAGCGATCGCTTTATTGCTTCTATGT +
Preference number: 1 (lower is better)
Translates to: ISKHLSLWSPAGEFG*MRKEIPAIALLLLC
Trigger: ACATAGAAGCAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTTGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTaGATTCAAAACAGGTTACTTAATACAGCTCTGTCTGTGGGCTCA +
Preference number: 1 (lower is better)
Translates to: IDQRRVVIASGGVNV*IQNRLLNTALSVGS
Trigger: TGAGCCCACAGACAGAGCTGTATTAAGTAACCTGTTTTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 90 bp GCTTTACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTaGCACACACACACAGGGAATACAGGTGGATCTTTTGCAGGTTTT +
Preference number: 1 (lower is better)
Translates to: ALHTLPHSQVGKWSF*HTHTGNTGGSFAGF
Trigger: AAAACCTGCAAAAGATCCACCTGTATTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATaGTCTTTGCTACATATTCAACTTGGGCAGCTCCTTTTTGAGGCT +
Preference number: 1 (lower is better)
Translates to: GELLVIRLATIQLIP*SLLHIQLGQLLFEA
Trigger: AGCCTCAAAAAGGAGCTGCCCAAGTTGAATATGTAGCAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGGGGCAGCCACCGGGCTaGCGGGGACCTCTCCGAACG +
Preference number: 2 (lower is better)
Translates to: QGSHCACQDATTWGLPALGQPPG*RGPLRT
Trigger: CGTTCGGAGAGGTCCCCGCCAGCCCGGTGGCTGCCC...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTCCACCACGTGGGGGCTaGCAGCCCTGCAATCCAGCC +
Preference number: 2 (lower is better)
Translates to: PFALCLGVSTARGSLGKAPPRGG*QPCNPA
Trigger: GGCTGGATTGCAGGGCTGGCAGCCCCCACGTGGTGG...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCCTGTGCCTGTCAGGATaGCACCACGTGGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSLCLSG*HHVGAA
Trigger: GGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAG...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACCGCGGGCCCAGGCCCTaGACCTGCGGTAGGAACGGT +
Preference number: 2 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHRGPRP*TCGRNG
Trigger: ACCGTTCCTACCGCAGGTCCAGGGCCTGGGCCCGCG...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554474.5
3UTR-3UTR CCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCACCAAGGGGGCCAGTTaGGTGGCAGGCTCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSTKGAS*VAGSWF
Trigger: GAACCAGGAGCCTGCCACCCAACTGGCCCCCTTGGT...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCAGGGTGGAAAGACCTTaGGGCGGGGCAATCCGTGAG +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSRVERP*GGAIRE
Trigger: CTCACGGATTGCCCCGCCTCAAGGTCTTTCCACCCT...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 90 bp GAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATaGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACA +
Preference number: 2 (lower is better)
Translates to: EPCMRVSASSKGAPP*ASSSRGIDRRPGST
Trigger: TGTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
3UTR-3UTR TCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGACAGAGACGTGAGGGATaGCAGGCGGCGGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGQRREG*QAAVGM
Trigger: CATCCCCACCGCCGCCTGTCATCCCTCACGTCTCTG...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGAGGCGGGGCAATCCGTaGGGTTGCTTTCTTGCTGAA +
Preference number: 2 (lower is better)
Translates to: QGSHCACQDATTWGLPALRRGNP*GCFLAE
Trigger: TTCAGCAAGAAAGCAACCTCACGGATTGCCCCGCCT...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCCAGTCCACCTGGCTCTaGTCAGATCCTCTGGGGATC +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSQSTWL*SDPLGI
Trigger: GATCCCCAGAGGATCTGACCAGAGCCAGGTGGACTG...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCCACACAAAGGAGACCTaGCCCAGCAAGGGTCTCACT +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSHTKET*PSKGLT
Trigger: AGTGAGACCCTTGCTGGGTCAGGTCTCCTTTGTGTG...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCCTTGGGAACACCCTTTaGCCTATGCCTAGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSLGNTL*PMPRGQ
Trigger: CTGACCCCTAGGCATAGGGCAAAGGGTGTTCCCAAG...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGTGCTTCCTCGAACGCTaGACCCTTGAGACATGTGAC +
Preference number: 2 (lower is better)
Translates to: QGSHCACQDATTWGLPALCFLER*TLETCD
Trigger: GTCACATGTCTCAAGGGTCCAGCGTTCGAGGAAGCA...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCGACAGGACTTGGAGGTaGTGGGGTGGAAAGATGGGT +
Preference number: 2 (lower is better)
Translates to: GTPFALCLGVSTARGSLGDRTWR*WGGKMG
Trigger: ACCCATCTTTCCACCCCACCACCTCCAAGTCCTGTC...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCGAGGTGCCTGCTGCTTaGGAACACCCTTTGCCCTAT +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSEVPAA*EHPLPY
Trigger: ATAGGGCAAAGGGTGTTCCCAAGCAGCAGGCACCTC...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCCAGGGAAGAAGCCCCTaGAGCATGTCCCCATGTGTT +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSQGRSP*SMSPCV
Trigger: AACACATGGGGACATGCTCCAGGGGCTTCTTCCCTG...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCGCCTGGTGCTGGCAGTaGCACCCGGGTGGCCACAGA +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCAWCWQ*HPGGHR
Trigger: TCTGTGGCCACCCGGGTGTCACTGCCAGCACCAGGC...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTGCCTGGTGCTGGCAGTaGCACCCGGGTGGCCACAGA +
Preference number: 2 (lower is better)
Translates to: GCGWTFICASLQAFLFPCAWCWQ*HPGGHR
Trigger: TCTGTGGCCACCCGGGTGTCACTGCCAGCACCAGGC...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCGCCTGGTGCTGGCAGTaGCACCCGGGTGGCCACAGA +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSAWCWQ*HPGGHR
Trigger: TCTGTGGCCACCCGGGTGTCACTGCCAGCACCAGGC...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGGCGATGGCACTGCTGTaGGGGACAGAAGGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLAMALL*GTEGWC
Trigger: GCACCAGCCTTCTGTCCCTCACAGCAGTGCCATCGC...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCGGGTTTGAGTCCATCTaGAGTCTCCCTAGCTCCGTT +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSGFESI*SLPSSV
Trigger: AACGGAGCTAGGGAGACTTCAGATGGACTCAAACCC...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTTGCAAATGCTGGATGTaGTCTCGGTCCACTCATGCC +
Preference number: 2 (lower is better)
Translates to: PFALCLGVSTARGSLGKACKCWM*SRSTHA
Trigger: GGCATGAGTGGACCGAGAGCACATCCAGCATTTGCA...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATCTGTGCCTGTCAGGATaGCACCACGTGGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHLCLSG*HHVGAA
Trigger: GGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAG...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCCCAGAGAGTTCCTGCTaGTTAGTTCAGGCCATCTGG +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSPESSC*LVQAIW
Trigger: CCAGATGGCCTGAACTAAGCAGCAGGAACTCTCTGG...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGACAGGATGCCACCACGTaGGGGCTGCCAGCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRQDATT*GLPALQ
Trigger: TTGCAGGGCTGGCAGCCCCCACGTGGTGGCATCCTG...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGGGAGGAGAGCCCTGTaGCCTGGCCTGGTCCCTTCG +
Preference number: 2 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSGRRAL*PGLVPS
Trigger: CGAAGGGACCAGGCCAGGCCACAGGGCTCTCCTCCC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTGGGAGGAGAGCCCTGTaGCCTGGCCTGGTCCCTTCG +
Preference number: 2 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCGRRAL*PGLVPS
Trigger: CGAAGGGACCAGGCCAGGCCACAGGGCTCTCCTCCC...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCGGGAGGAGAGCCCTGTaGCCTGGCCTGGTCCCTTCG +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSGRRAL*PGLVPS
Trigger: CGAAGGGACCAGGCCAGGCCACAGGGCTCTCCTCCC...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGACCAAGGGGGCCAGTTaGGTGGCAGGCTCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLTKGAS*VAGSWF
Trigger: GAACCAGGAGCCTGCCACCCAACTGGCCCCCTTGGT...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAGTGTTCTCCCCTGAATaGGCTGGGATCAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGVFSPE*AGIRAS
Trigger: AGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACAC...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGCAGAGACGTGAGGGATaGCAGGCGGCGGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMQRREG*QAAVGM
Trigger: CATCCCCACCGCCGCCTGTCATCCCTCACGTCTCTG...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCCAGAGACGTGAGGGATaGCAGGCGGCGGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: HVPMCSASPSCNSESQEVQRREG*QAAVGM
Trigger: CATCCCCACCGCCGCCTGTCATCCCTCACGTCTCTG...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCAGAGACGTGAGGGATaGCAGGCGGCGGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: GCGWTFICASLQAFLFPCQRREG*QAAVGM
Trigger: CATCCCCACCGCCGCCTGTCATCCCTCACGTCTCTG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGGTGGCCACAGAGACGTaGGGGATGACAGGCGGCGGT +
Preference number: 2 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMVATET*GMTGGG
Trigger: ACCGCCGCCTGTCATCCCTCACGTCTCTGTGGCCAC...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGAGGGTGGAAAGACCTTaGGGCGGGGCAATCCGTGAG +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLRVERP*GGAIRE
Trigger: CTCACGGATTGCCCCGCCTCAAGGTCTTTCCACCCT...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGCGATGGCACTGCTGTaGGGGACAGAAGGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHAMALL*GTEGWC
Trigger: GCACCAGCCTTCTGTCCCTCACAGCAGTGCCATCGC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCTGTCATCTACAACAGTaGTTCCTCGAACGCTGGACC +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSCHLQQ*FLERWT
Trigger: GGTCCAGCGTTCGAGGAAGCACTGTTGTAGATGACA...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTGAGGGCACTGAGGTaGCTGCTGCTTGGGAACACC +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLLRALR*LLLGNT
Trigger: GGTGTTCCCAAGCAGCAGGCACCTCAGTGCCCTCAG...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCTTAGTCAGATGCCAGTaGCTGGTGCCTTGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSLVRCQ*LVPCVS
Trigger: AGACACACAAGGCACCAGGCACTGGCATCTGACTAA...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCGCAGTGACACCCGGGTaGCCACAGAGACGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPAVTPG*PQRREG
Trigger: TCCCTCACGTCTCTGTGGCCACCCGGGTGTCACTGC...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGAGCAGTGACACCCGGGTaGCCACAGAGACGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRAVTPG*PQRREG
Trigger: TCCCTCACGTCTCTGTGGCCACCCGGGTGTCACTGC...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTGGGCAGCCACCGGGCTaGCGGGGACCTCTCCGAACG +
Preference number: 2 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFGQPPG*RGPLRT
Trigger: CGTTCGGAGAGGTCCCCGCCAGCCCGGTGGCTGCCC...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCCAGGATGCCACCACGTaGGGGCTGCCAGCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSQDATT*GLPALQ
Trigger: TTGCAGGGCTGGCAGCCCCCACGTGGTGGCATCCTG...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGGAAAGATGGGTCACTaGGGAGCACCCAGGAGGCCG +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHGKMGH*GAPRRP
Trigger: CGGCCTCCTGGGTGCTCCCCAGTGACCCATCTTTCC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCAGGGGGCCAGTTGGGTaGCAGGCTCCTGGTTCAGCG +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSRGPVG*QAPGSA
Trigger: CGCTGAACCAGGAGCCTGCCACCCAACTGGCCCCCT...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCGCGATGGCACTGCTGTaGGGGACAGAAGGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCAMALL*GTEGWC
Trigger: GCACCAGCCTTCTGTCCCTCACAGCAGTGCCATCGC...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGAATTGCTGCCTCTaGGACACTGAGGACTCAACA +
Preference number: 2 (lower is better)
Translates to: GTPFALCLGVSTARGSLGKNCCL*DTEDST
Trigger: TGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTT...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCAAGAATTGCTGCCTCTaGGACACTGAGGACTCAACA +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSKNCCL*DTEDST
Trigger: TGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTT...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCTTATTGCTCTGGGTTTaGGTCCATCTGAAGTCTCCC +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSLLLWV*VHLKSP
Trigger: GGGAGACTTCAGATGGACTCAAACCCAGAGCAATAA...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTTGTAACTATGGGAGGTaGCAGGGAGGTGATGCAAAT +
Preference number: 2 (lower is better)
Translates to: PFALCLGVSTARGSLGKACNYGR*QGGDAN
Trigger: ATTTGCATCACCTCCCTGGCACCTCCCATAGTTACA...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCCTTCGTAGCATACTCTaGCCCAGCTTCACACACAAA +
Preference number: 2 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSLRSIL*PSFTHK
Trigger: TTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAG...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCGGAAAGATGGGTCACTaGGGAGCACCCAGGAGGCCG +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCGKMGH*GAPRRP
Trigger: CGGCCTCCTGGGTGCTCCCCAGTGACCCATCTTTCC...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCAGAAGGCTGGTGCCCTaGGGACAGGGCTGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPRRLVP*GQGCVE
Trigger: TTCCACACAGCCCTGTCCCCAGGGCACCAGCCTTCT...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACCAGCCCGGGGATCCTTaGGCAAGGCTGGGGGCAAAT +
Preference number: 2 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYQPGDP*ARLGAN
Trigger: ATTTGCCCCCAGCCTTGCCCAAGGATCCCCGGGCTG...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGGCCCTGTCTGCAGCCTaGCTTAGAAAGCCCCTGCAT +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLALSAA*LRKPLH
Trigger: ATGCAGGGGCTTTCTAAGCCAGGCTGCAGACAGGGC...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGGCTGCCCTGATGCTGTaGTTGTGGGGCTGCCAAGAT +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLAALML*LWGCQD
Trigger: ATCTTGGCAGCCCCACAACCACAGCATCAGGGCAGC...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGGACTGCACTGGCAGTTaGGCCCTGCTTTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLDCTGS*ALLCSW
Trigger: CCAGGAACAAAGCAGGGCCCAACTGCCAGTGCAGTC...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTACATGTGACGGGACCTaGGGGCAGCCACCGGGCTGG +
Preference number: 2 (lower is better)
Translates to: CPARIAASETLRTQHLSSTCDGT*GQPPGW
Trigger: CCAGCCCGGTGGCTGCCCTCAGGTCCCGTCACATGT...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACACCATCGCCCTTCATTaGCCTCACTCTTTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHTIALH*PHSFSF
Trigger: GAAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGT...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATACACCCTTTGCCCTATaGCTAGGGGTCAGCACAGCC +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHTPFAL*LGVSTA
Trigger: GGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGT...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCACACCCTTTGCCCTATaGCTAGGGGTCAGCACAGCC +
Preference number: 2 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPTPFAL*LGVSTA
Trigger: GGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGT...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCCTGAGGGCACTGAGGTaGCTGCTGCTTGGGAACACC +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCLRALR*LLLGNT
Trigger: GGTGTTCCCAAGCAGCAGGCACCTCAGTGCCCTCAG...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGCCCAGGCCCTGGACCTaGGGTAGGAACGGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGPRPWT*GRNGQE
Trigger: CTCCTGACCGTTCCTACCGCAGGTCCAGGGCCTGGG...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554474.5
3UTR-3UTR CCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACTGGACTCTTTCTTTCTaGTCTCCCCATTCACCCACC +
Preference number: 2 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHWTLSF*SPHSPT
Trigger: GGTGGGTGAATGGGGAGACCAGAAAGAAAGAGTCCA...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCGATGACAGGCGGCGGTaGGGATGTAGTGGCTGTAAC +
Preference number: 2 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPDDRRR*GCSGCN
Trigger: GTTACAGCCACTACATCCCCACCGCCGCCTGTCATC...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACCCCTGTGGCCTGGCCTaGTCCCTTCGTAGCATACTC +
Preference number: 2 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYPCGLA*SLRSIL
Trigger: GAGTATGCTACGAAGGGACCAGGCCAGGCCACAGGG...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGGTGGGGTGGAAAGATaGGTCACTGGGGAGCACCCA +
Preference number: 2 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSGGVER*VTGEHP
Trigger: TGGGTGCTCCCCAGTGACCCATCTTTCCACCCCACC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCCCAGGCCCCTTGCCCTaGATAACTGAGGGCACTGAG +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCPGPLP*ITEGTE
Trigger: CTCAGTGCCCTCAGTTATCCAGGGCAAGGGGCCTGG...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCCAGTCCACCTGGCTCTaGTCAGATCCTCTGGGGATC +
Preference number: 2 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPQSTWL*SDPLGI
Trigger: GATCCCCAGAGGATCTGACCAGAGCCAGGTGGACTG...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCCATCTGGCTGCGGCTaGACGTTTATATGTGCCAGC +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLPSGCG*TFICAS
Trigger: GCTGGCACATATAAACGTCCAGCCGCAGCCAGATGG...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTGTGTTCTCCCCTGAATaGGCTGGGATCAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCVFSPE*AGIRAS
Trigger: AGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACAC...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGAATTTGCCAGAAGGTGTaGCCGTCTCCAGACAGCGAG +
Preference number: 2 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRICQKV*PSPDSE
Trigger: CTCGCTGTCTGGAGACGGTCACACCTTCTGGCAAAT...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTCAGAGACGTGAGGGATaGCAGGCGGCGGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: CPARIAASETLRTQHLSSQRREG*QAAVGM
Trigger: CATCCCCACCGCCGCCTGTCATCCCTCACGTCTCTG...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTTACCAGCCTCTGTGCTaGGCATGTGCAGGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: GCGWTFICASLQAFLFPCYQPLC*ACAGVQ
Trigger: CTGGACACCTGCACATGCTCAGCACAGAGGCTGGTA...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCCTCCGTTGTGCTTACTaGCCCTCCCCTCTGGATGTC +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSLRCAY*PSPLDV
Trigger: GACATCCAGAGGGGAGGGTCAGTAAGCACAACGGAG...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAACCATCGCCCTTCATTaGCCTCACTCTTTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGTIALH*PHSFSF
Trigger: GAAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGT...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTTACAGGTGGATCTTTTaGAGGTTTTTGCATTTCCCC +
Preference number: 2 (lower is better)
Translates to: PFALCLGVSTARGSLGKAYRWIF*RFLHFP
Trigger: GGGGAAATGCAAAAACCTGCAAAAGATCCACCTGTA...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATCTTGGGAACACCCTTTaGCCTATGCCTAGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHLGNTL*PMPRGQ
Trigger: CTGACCCCTAGGCATAGGGCAAAGGGTGTTCCCAAG...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCGGCTTAGAAAGCCCCTaGATCATGGGGAGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: HVPMCSASPSCNSESQEVGLESP*IMGRSR
Trigger: CCTGCTCCTCCCCATGATGCAGGGGCTTTCTAAGCC...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATTCCCTAGCTCCGTTGTaGTTACTGACCCTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHSLAPL*LLTLPS
Trigger: AGAGGGGAGGGTCAGTAAGCACAACGGAGCTAGGGA...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATACTGGGGAACATGAGTaGCTTAGCTGTGGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHTGEHE*LSCGVV
Trigger: CACCACCCCACAGCTAAGGCACTCATGTTCCCCAGT...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGAGCCCAGAGAGTTCCTaGTGCTTAGTTCAGGCCATC +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLSPESS*CLVQAI
Trigger: GATGGCCTGAACTAAGCAGCAGGAACTCTCTGGGCT...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGATGGACTCTTTCTTTCTaGTCTCCCCATTCACCCACC +
Preference number: 2 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGWTLSF*SPHSPT
Trigger: GGTGGGTGAATGGGGAGACCAGAAAGAAAGAGTCCA...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATAGGGGAGAATCCCAATaGCCCCTGAGTTCATGGCCA +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHRGESQ*PLSSWP
Trigger: TGGCCATGAACTCAGGGGCCATTGGGATTCTCCCCT...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTGGGGGAGTGAATGTCTaGATTCAAAACAGGTTACTT +
Preference number: 2 (lower is better)
Translates to: PFALCLGVSTARGSLGKAGGVNV*IQNRLL
Trigger: AAGTAACCTGTTTTGAATCCAGACATTCACTCCCCC...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACGCCCTGTCTGCAGCCTaGCTTAGAAAGCCCCTGCAT +
Preference number: 2 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYALSAA*LRKPLH
Trigger: ATGCAGGGGCTTTCTAAGCCAGGCTGCAGACAGGGC...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCGCCCTGTCTGCAGCCTaGCTTAGAAAGCCCCTGCAT +
Preference number: 2 (lower is better)
Translates to: HVPMCSASPSCNSESQEVALSAA*LRKPLH
Trigger: ATGCAGGGGCTTTCTAAGCCAGGCTGCAGACAGGGC...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCGCTGCCCTGATGCTGTaGTTGTGGGGCTGCCAAGAT +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCAALML*LWGCQD
Trigger: ATCTTGGCAGCCCCACAACCACAGCATCAGGGCAGC...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATCAGGGAAGAAGCCCCTaGAGCATGTCCCCATGTGTT +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHQGRSP*SMSPCV
Trigger: AACACATGGGGACATGCTCCAGGGGCTTCTTCCCTG...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 90 bp GAGGTGATGCAAATGCTGGATGTGCTCTCGGTCCACTCATGCCTCTaGAATTTGCCAGAAGGTGTGACCGTCTCCAGACAGCGAGGGAGT +
Preference number: 2 (lower is better)
Translates to: EVMQMLDVLSVHSCL*NLPEGVTVSRQRGS
Trigger: ACTCCCTCGCTGTCTGGAGACGGTCACACCTTCTGGCAAATTCAAGAGGCATGAGTGGACCGAGAGCACATCCAGCATTTGCATCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGG +
Preference number: 2 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALLSPSQ*PSLLVR
Trigger: CCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAG...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCATTTGCCAGAAGGTGTaGCCGTCTCCAGACAGCGAG +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSICQKV*PSPDSE
Trigger: CTCGCTGTCTGGAGACGGTCACACCTTCTGGCAAAT...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACATTTGCCAGAAGGTGTaGCCGTCTCCAGACAGCGAG +
Preference number: 2 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYICQKV*PSPDSE
Trigger: CTCGCTGTCTGGAGACGGTCACACCTTCTGGCAAAT...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCATTTGCCAGAAGGTGTaGCCGTCTCCAGACAGCGAG +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCICQKV*PSPDSE
Trigger: CTCGCTGTCTGGAGACGGTCACACCTTCTGGCAAAT...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCAGGCGGGGCAATCCGTaGGGTTGCTTTCTTGCTGAA +
Preference number: 2 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSRRGNP*GCFLAE
Trigger: TTCAGCAAGAAAGCAACCTCACGGATTGCCCCGCCT...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTAGGCGGGGCAATCCGTaGGGTTGCTTTCTTGCTGAA +
Preference number: 2 (lower is better)
Translates to: GCGWTFICASLQAFLFPCRRGNP*GCFLAE
Trigger: TTCAGCAAGAAAGCAACCTCACGGATTGCCCCGCCT...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATAGCTGTGGGGTGGTGTaGGAGTATTATTGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHSCGVV*EYYCSG
Trigger: CCCAGAGCAATAATACTCTCACACCACCCCACAGCT...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGTCAGCGTCCTGTTGGTaGGGTAGTTTGAAATCCCAG +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLSASCW*GSLKSQ
Trigger: CTGGGATTTCAAACTACCTCACCAACAGGACGCTGA...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGATGTAACTATGGGAGGTaGCAGGGAGGTGATGCAAAT +
Preference number: 2 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGCNYGR*QGGDAN
Trigger: ATTTGCATCACCTCCCTGGCACCTCCCATAGTTACA...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAACCACCACGTGGGGGCTaGCAGCCCTGCAATCCAGCC +
Preference number: 2 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQPPRGG*QPCNPA
Trigger: GGCTGGATTGCAGGGCTGGCAGCCCCCACGTGGTGG...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCACCGGTTTAGAGGGGTaGTTTGGCTGGGCCTTCAGA +
Preference number: 2 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSTGLEG*FGWAFR
Trigger: TCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGT...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGTGCATGACCAAGTTCTaGGTGGTAGATGGACCTTGG +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLCMTKF*VVDGPW
Trigger: CCAAGGTCCATCTACCACGCAGAACTTGGTCATGCA...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCGATGCCAGTGCCTGGTaGCTTGTGTGTCTAACCCGA +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCDASAW*LVCLTR
Trigger: TCGGGTTAGACACACAAGGCACCAGGCACTGGCATC...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCCCTCCAATACATTCTaGAGGGCCCAAAGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLPSNTF*RAQRKR
Trigger: TCTCTTCCTTTGGGCCCTGCAGAATGTATTGGAGGG...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTCAGGATGCCACCACGTaGGGGCTGCCAGCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: KNSQGYNITKTPNARDGTQDATT*GLPALQ
Trigger: TTGCAGGGCTGGCAGCCCCCACGTGGTGGCATCCTG...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCCCTTCAGATAAAGACTaGGAGGAGAGCCCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSPSDKD*EESPVA
Trigger: GGCCACAGGGCTCTCCTCCCAGTCTTTATCTGAAGG...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCCTGATGCTGTGGTTGTaGGGCTGCCAAGATGTGGCT +
Preference number: 2 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSLMLWL*GCQDVA
Trigger: AGCCACATCTTGGCAGCCCCACAACCACAGCATCAG...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCCCATCTGGCTGCGGCTaGACGTTTATATGTGCCAGC +
Preference number: 2 (lower is better)
Translates to: HVPMCSASPSCNSESQEVPSGCG*TFICAS
Trigger: GCTGGCACATATAAACGTCCAGCCGCAGCCAGATGG...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAACCAAGGGGGCCAGTTaGGTGGCAGGCTCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRTKGAS*VAGSWF
Trigger: GAACCAGGAGCCTGCCACCCAACTGGCCCCCTTGGT...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTGGGAAGGCTTTCCTaGTGGTGGTTTTTGAAGCAC +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLLGRLS*WWFLKH
Trigger: GTGCTTCAAAAACCACCACCAGGAAAGCCTTCCCAG...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 90 bp ATTATTGCTCTGGGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTaGTGCTTACTGACCCTCCCCTCTGGATGTCCCCAGAGGTGCTTG +
Preference number: 2 (lower is better)
Translates to: IIALGLSPSEVSLAP*CLLTLPSGCPQRCL
Trigger: CAAGCACCTCTGGGGACATCCAGAGGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACCCAGAGCAATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 90 bp CTAGCCCAGGGGATGCCTTATCACTGGGTGGTACTAATGAGTAGGTaGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGGCCTCT +
Preference number: 2 (lower is better)
Translates to: LAQGMPYHWVVLMSR*LASAVAMVTRAQAS
Trigger: AGAGGCCTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCAGTGATAAGGCATCCCCTGGGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCCTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGG +
Preference number: 2 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPLSPSQ*PSLLVR
Trigger: CCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAG...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGTGTTCTCCCCTGAATaGGCTGGGATCAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRVFSPE*AGIRAS
Trigger: AGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACAC...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACGACCTCTCCGAACGCTaGTCTCAAAGAGGGTGGAAA +
Preference number: 2 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYDLSER*SQRGWK
Trigger: TTTCCACCCTCTTTGAGATCAGCGTTCGGAGAGGTC...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATTGCGTATCAGGCACCTaGCTCGGTGCTTTACATACA +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHCVSGT*LGALHT
Trigger: TGTATGTAAAGCACCGAGTCAGGTGCCTGATACGCA...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAACCATCGCCCTTCATTaGCCTCACTCTTTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGTIALH*PHSFSF
Trigger: GAAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGT...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTGCAAATGCTGGATGTaGTCTCGGTCCACTCATGCC +
Preference number: 2 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSCKCWM*SRSTHA
Trigger: GGCATGAGTGGACCGAGAGCACATCCAGCATTTGCA...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGATGTCATCTACAACAGTaGTTCCTCGAACGCTGGACC +
Preference number: 2 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRCHLQQ*FLERWT
Trigger: GGTCCAGCGTTCGAGGAAGCACTGTTGTAGATGACA...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACACCACCACGTGGGGGCTaGCAGCCCTGCAATCCAGCC +
Preference number: 2 (lower is better)
Translates to: YIHYLTARLANGHFDTHTPPRGG*QPCNPA
Trigger: GGCTGGATTGCAGGGCTGGCAGCCCCCACGTGGTGG...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAACTGTGCCTGTCAGGATaGCACCACGTGGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQLCLSG*HHVGAA
Trigger: GGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAG...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGATGCCCGCGATGGCACTaGTGTGAGGGACAGAAGGCT +
Preference number: 2 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRCPRWH*CEGQKA
Trigger: AGCCTTCTGTCCCTCACAGCAGTGCCATCGCGGGCA...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACCAAGAGAGGAACCATTaGCAGTGGGGGAAACTTGGG +
Preference number: 2 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYQERNH*QWGKLG
Trigger: CCCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTG...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATTGCATGACCAAGTTCTaGGTGGTAGATGGACCTTGG +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHCMTKF*VVDGPW
Trigger: CCAAGGTCCATCTACCACGCAGAACTTGGTCATGCA...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGGGTGGGTGGTCACTTaGTGCAGCTGCCCTGATGCT +
Preference number: 2 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRGWVVT*CSCPDA
Trigger: AGCATCAGGGCAGCTGCAGCAAGTGACCACCCACCC...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCTGCTTCCTCGAACGCTaGACCCTTGAGACATGTGAC +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCCFLER*TLETCD
Trigger: GTCACATGTCTCAAGGGTCCAGCGTTCGAGGAAGCA...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACCCTTTGGTCACCAGCTaGCGAATTTGGCTGCATGAG +
Preference number: 2 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYPLVTS*RIWLHE
Trigger: CTCATGCAGCCAAATTCGCCAGCTGGTGACCAAAGG...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTCCTTTGGTCACCAGCTaGCGAATTTGGCTGCATGAG +
Preference number: 2 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCPLVTS*RIWLHE
Trigger: CTCATGCAGCCAAATTCGCCAGCTGGTGACCAAAGG...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCCCTTTGGTCACCAGCTaGCGAATTTGGCTGCATGAG +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCPLVTS*RIWLHE
Trigger: CTCATGCAGCCAAATTCGCCAGCTGGTGACCAAAGG...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGGTGGGGTGGAAAGATaGGTCACTGGGGAGCACCCA +
Preference number: 2 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRGGVER*VTGEHP
Trigger: TGGGTGCTCCCCAGTGACCCATCTTTCCACCCCACC...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATATCCTTGGGCAAGGCTaGGGGCAAATGAACTTAGAC +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHILGQG*GQMNLD
Trigger: GTCTAAGTTCATTTGCCCCCAGCCTTGCCCAAGGAT...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 90 bp AGCACCCAGGAGGCCGGGTCTGCAAATAAGCAAGCATCTGAGCCTTaGGTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACC +
Preference number: 2 (lower is better)
Translates to: STQEAGSANKQASEP*VTSWRIWLHEKRNT
Trigger: GGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTTGCTTATTTGCAGACCCGGCCTCCTGGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 90 bp CGTGGTAGATGGACCTTGGATAGGCAGCCTCGTTCCACTCCCTTCTaGCAAAGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTA +
Preference number: 2 (lower is better)
Translates to: RGRWTLDRQPRSTPF*QSFWLDLLGNMSAL
Trigger: TAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCTTTGCAAGAAGGGAGTGGAACGAGGCTGCCTATCCAAGGTCCATCTACCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 90 bp TCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATaGCTACATTTGCTACTTTGCTACTTTATGGCCCCTGGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: SWSFGPCPRIDPGPL*LHLLLCYFMAPGSS
Trigger: GCTAGACCCAGGGGCCATAAAGTAGCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGTGGCCACAGAGACGTaGGGGATGACAGGCGGCGGT +
Preference number: 2 (lower is better)
Translates to: GELLVIRLATIQLIPWSLVATET*GMTGGG
Trigger: ACCGCCGCCTGTCATCCCTCACGTCTCTGTGGCCAC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGAATCCCCGCAGCTGTaGAACAAAAAGCTCTGTCAT +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHESPQL*NKKLCH
Trigger: ATGACAGAGCTTTTTGTTTCACAGCTGCGGGGATTC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCAAGAATTGCTGCCTCTaGGACACTGAGGACTCAACA +
Preference number: 2 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPKNCCL*DTEDST
Trigger: TGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTT...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGACCATCGCCCTTCATTaGCCTCACTCTTTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQTIALH*PHSFSF
Trigger: GAAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGT...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCTGCATGACCAAGTTCTaGGTGGTAGATGGACCTTGG +
Preference number: 2 (lower is better)
Translates to: HVPMCSASPSCNSESQEVCMTKF*VVDGPW
Trigger: CCAAGGTCCATCTACCACGCAGAACTTGGTCATGCA...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCTTCAGGCCATCTGGCTaGGGCTGGACGTTTATATGT +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSFRPSG*GWTFIC
Trigger: ACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAA...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCTCAGCTAGTCCAAGCTaGAACTCAGAGTCGCAAGAG +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCSASPS*NSESQE
Trigger: CTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGA...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTGGACTCTTTCTTTCTaGTCTCCCCATTCACCCACC +
Preference number: 2 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSWTLSF*SPHSPT
Trigger: GGTGGGTGAATGGGGAGACCAGAAAGAAAGAGTCCA...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAAGGGCCTCTTAGCGAGTaGAGTGTTGGAATACAACTG +
Preference number: 2 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQGPLSE*SVGIQL
Trigger: CAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCC...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTGGGCCTCTTAGCGAGTaGAGTGTTGGAATACAACTG +
Preference number: 2 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCGPLSE*SVGIQL
Trigger: CAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCC...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCATCCTTGGGCAAGGCTaGGGGCAAATGAACTTAGAC +
Preference number: 2 (lower is better)
Translates to: HVPMCSASPSCNSESQEVILGQG*GQMNLD
Trigger: GTCTAAGTTCATTTGCCCCCAGCCTTGCCCAAGGAT...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCATCCTTGGGCAAGGCTaGGGGCAAATGAACTTAGAC +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCILGQG*GQMNLD
Trigger: GTCTAAGTTCATTTGCCCCCAGCCTTGCCCAAGGAT...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTTTGGACATTTTACGTaGAAGCAGTGCCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMFGHFT*KQCLVL
Trigger: CAGCACCAGGCACTGCTTTCACGTAAAATGTCCAAA...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGAATCCCAATGGCCCCTaGGTTCATGGCCATGTTTAT +
Preference number: 2 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMNPNGP*VHGHVY
Trigger: ATAAACATGGCCATGAACTCAGGGGCCATTGGGATT...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACAATCCCAATGGCCCCTaGGTTCATGGCCATGTTTAT +
Preference number: 2 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYNPNGP*VHGHVY
Trigger: ATAAACATGGCCATGAACTCAGGGGCCATTGGGATT...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTCACACAAAGGAGACCTaGCCCAGCAAGGGTCTCACT +
Preference number: 2 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFHTKET*PSKGLT
Trigger: AGTGAGACCCTTGCTGGGTCAGGTCTCCTTTGTGTG...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCTTATTGCTCTGGGTTTaGGTCCATCTGAAGTCTCCC +
Preference number: 2 (lower is better)
Translates to: HVPMCSASPSCNSESQEVLLLWV*VHLKSP
Trigger: GGGAGACTTCAGATGGACTCAAACCCAGAGCAATAA...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCTCTCGGTCCACTCATaGCTCTTGAATTTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: GCGWTFICASLQAFLFPCLSVHS*LLNLPE
Trigger: TTCTGGCAAATTCAAGAGGCATGAGTGGACCGAGAG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGCTTCGTAGCATACTCTaGCCCAGCTTCACACACAAA +
Preference number: 2 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMLRSIL*PSFTHK
Trigger: TTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAG...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTACCGGTTTAGAGGGGTaGTTTGGCTGGGCCTTCAGA +
Preference number: 2 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFTGLEG*FGWAFR
Trigger: TCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGT...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCTCTGTGCTGAGCATGTaGAGGTGTCCAGCAAGAATT +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSSVLSM*RCPARI
Trigger: AATTCTTGCTGGACACCTGCACATGCTCAGCACAGA...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGCCAGCCCAGGCTCTGTaGACTCTTTCTTTCTGGTCT +
Preference number: 2 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRPAQAL*TLSFWS
Trigger: AGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGG...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCTTTAGAGGGGTGCTTTaGCTGGGCCTTCAGATAAAG +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSFRGVL*LGLQIK
Trigger: CTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAA...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTAGAGGGGTGCTTTaGCTGGGCCTTCAGATAAAG +
Preference number: 2 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSFRGVL*LGLQIK
Trigger: CTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAA...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGGTAGTCATAGCAAGTaGGGGAGTGAATGTCTGGAT +
Preference number: 2 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSGSHSK*GSECLD
Trigger: ATCCAGACATTCACTCCCCCACTTGCTATGACTACC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCCTGCCAAGATGTGGCTaGAGAGCACTTTTCCTCATA +
Preference number: 2 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSLPRCG*RALFLI
Trigger: TATGAGGAAAAGTGCTCTCCAGCCACATCTTGGCAG...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGAGGCTTTCCTGGTGGTaGTTTTTGAAGCACATGTAT +
Preference number: 2 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLRLSWW*FLKHMY
Trigger: ATACATGTGCTTCAAAAACCACCACCAGGAAAGCCT...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 90 bp TTCCAAATGTACTTGCATGACCAAGTTCTGCGTGGTAGATGGACCTaGGATAGGCAGCCTCGTTCCACTCCCTTCTTGCAAAGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: FQMYLHDQVLRGRWT*DRQPRSTPFLQSFW
Trigger: CCAGAAGCTTTGCAAGAAGGGAGTGGAACGAGGCTGCCTATCCAAGGTCCATCTACCACGCAGAACTTGGTCATGCAAGTACATTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACCTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGG +
Preference number: 2 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYLSPSQ*PSLLVR
Trigger: CCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAG...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGAGGGTGGAAAGACCTTaGGGCGGGGCAATCCGTGAG +
Preference number: 2 (lower is better)
Translates to: GELLVIRLATIQLIPWSLRVERP*GGAIRE
Trigger: CTCACGGATTGCCCCGCCTCAAGGTCTTTCCACCCT...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTAGGCACCTGACTCGGTaGTTTACATACATTACCTCA +
Preference number: 2 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCRHLTR*FTYITS
Trigger: TGAGGTAATGTATGTAAAGCACCGAGTCAGGTGCCT...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACAGGCACCTGACTCGGTaGTTTACATACATTACCTCA +
Preference number: 2 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYRHLTR*FTYITS
Trigger: TGAGGTAATGTATGTAAAGCACCGAGTCAGGTGCCT...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTCAAGAGAGGAACCATTaGCAGTGGGGGAAACTTGGG +
Preference number: 2 (lower is better)
Translates to: CPARIAASETLRTQHLSSQERNH*QWGKLG
Trigger: CCCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTG...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCGTTATTTTAGTCAGATaGCAGTGCCTGGTGCCTTGT +
Preference number: 2 (lower is better)
Translates to: HVPMCSASPSCNSESQEVVILVR*QCLVPC
Trigger: ACAAGGCACCAGGCACTGGCATCTGACTAAAATAAC...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGAGCCCAGAGAGTTCCTaGTGCTTAGTTCAGGCCATC +
Preference number: 2 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQSPESS*CLVQAI
Trigger: GATGGCCTGAACTAAGCAGCAGGAACTCTCTGGGCT...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGTGGACTCTTTCTTTCTaGTCTCCCCATTCACCCACC +
Preference number: 2 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRWTLSF*SPHSPT
Trigger: GGTGGGTGAATGGGGAGACCAGAAAGAAAGAGTCCA...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTAGGGGAGAATCCCAATaGCCCCTGAGTTCATGGCCA +
Preference number: 2 (lower is better)
Translates to: KNSQGYNITKTPNARDGTRGESQ*PLSSWP
Trigger: TGGCCATGAACTCAGGGGCCATTGGGATTCTCCCCT...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTCCTTCAGATAAAGACTaGGAGGAGAGCCCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: KNSQGYNITKTPNARDGTPSDKD*EESPVA
Trigger: GGCCACAGGGCTCTCCTCCCAGTCTTTATCTGAAGG...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCACCTCACAGCCAGGTTaGCAAATGGTCATTTTGACA +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCTSQPG*QMVILT
Trigger: TGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGT...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATCCCCATAACTTGGAATaGGGCTTTATGCCATTGATT +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHPHNLE*GFMPLI
Trigger: AATCAATGGCATAAAGCCCCATTCCAAGTTATGGGG...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCTTCTTGCAAAGCTTCTaGCTTGATCTACTGGGGAAC +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSFLQSF*LDLLGN
Trigger: GTTCCCCAGTAGATCAAGCCAGAAGCTTTGCAAGAA...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACTTCTTGCAAAGCTTCTaGCTTGATCTACTGGGGAAC +
Preference number: 2 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYFLQSF*LDLLGN
Trigger: GTTCCCCAGTAGATCAAGCCAGAAGCTTTGCAAGAA...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGTCAGATGCCAGTGCCTaGTGCCTTGTGTGTCTAACC +
Preference number: 2 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQSDASA*CLVCLT
Trigger: GGTTAGACACACAAGGCACCAGGCACTGGCATCTGA...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGCTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGG +
Preference number: 2 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKLSPSQ*PSLLVR
Trigger: CCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAG...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGTGTTCTCCCCTGAATaGGCTGGGATCAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: GELLVIRLATIQLIPWSLVFSPE*AGIRAS
Trigger: AGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACAC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGGGGCTTTATGCCATTaGTTTACTCATCAAGTGGTT +
Preference number: 2 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSGALCH*FTHQVV
Trigger: AACCACTTGATGAGTAAATCAATGGCATAAAGCCCC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCGGGGCTTTATGCCATTaGTTTACTCATCAAGTGGTT +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSGALCH*FTHQVV
Trigger: AACCACTTGATGAGTAAATCAATGGCATAAAGCCCC...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGTTGGTGAGGTAGTTTaGAATCCCAGGAATCCTGCC +
Preference number: 2 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRVGEVV*NPRNPA
Trigger: GGCAGGATTCCTGGGATTTCAAACTACCTCACCAAC...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCATGCAAATGCTGGATGTaGTCTCGGTCCACTCATGCC +
Preference number: 2 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISCKCWM*SRSTHA
Trigger: GGCATGAGTGGACCGAGAGCACATCCAGCATTTGCA...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGTGCAAATGCTGGATGTaGTCTCGGTCCACTCATGCC +
Preference number: 2 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLCKCWM*SRSTHA
Trigger: GGCATGAGTGGACCGAGAGCACATCCAGCATTTGCA...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTTGTCATCTACAACAGTaGTTCCTCGAACGCTGGACC +
Preference number: 2 (lower is better)
Translates to: CPARIAASETLRTQHLSSCHLQQ*FLERWT
Trigger: GGTCCAGCGTTCGAGGAAGCACTGTTGTAGATGACA...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCTACAGGTGGATCTTTTaGAGGTTTTTGCATTTCCCC +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSYRWIF*RFLHFP
Trigger: GGGGAAATGCAAAAACCTGCAAAAGATCCACCTGTA...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCGCTGGCGAATTTGGCTaGATGAGAAAAGAAATACCA +
Preference number: 2 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSAGEFG*MRKEIP
Trigger: TGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGC...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGCAGAACAGGAGGGATaGATTTTAGGAAAAACATCA +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHAEQEG*ILGKTS
Trigger: TGATGTTTTTCCTAAAATGCATCCCTCCTGTTCTGC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCACAGGGAATACAGGTaGATCTTTTGCAGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: GCGWTFICASLQAFLFPCHREYR*IFCRFL
Trigger: CAAAAACCTGCAAAAGATCCACCTGTATTCCCTGTG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGGGGGGAGTGAATGTCTaGATTCAAAACAGGTTACTT +
Preference number: 2 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMGGVNV*IQNRLL
Trigger: AAGTAACCTGTTTTGAATCCAGACATTCACTCCCCC...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGATTTACTCATCAAGTaGTTAGTGCCTCCAAAGTAC +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHDLLIK*LVPPKY
Trigger: GTACTTTGGAGGCACTAACCACTTGATGAGTAAATC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGCCCCATAACTTGGAATaGGGCTTTATGCCATTGATT +
Preference number: 2 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMPHNLE*GFMPLI
Trigger: AATCAATGGCATAAAGCCCCATTCCAAGTTATGGGG...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTAAAGACCCCATAACTTaGAATGGGGCTTTATGCCAT +
Preference number: 2 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCKDPIT*NGALCH
Trigger: ATGGCATAAAGCCCCATTCCAAGTTATGGGGTCTTT...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGCTGCCCTGATGCTGTaGTTGTGGGGCTGCCAAGAT +
Preference number: 2 (lower is better)
Translates to: GELLVIRLATIQLIPWSLAALML*LWGCQD
Trigger: ATCTTGGCAGCCCCACAACCACAGCATCAGGGCAGC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 90 bp TTCCACTGTACCTCCAAGAGAGGAACCATTGCCAGTGGGGGAAACTaGGGCATGGTAGTCAAGAACTCACAAGGATACAACATAACGAAG +
Preference number: 2 (lower is better)
Translates to: FHCTSKRGTIASGGN*GMVVKNSQGYNITK
Trigger: CTTCGTTATGTTGTATCCTTGTGAGTTCTTGACTACCATGCCCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTGGAGGTACAGTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCACTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGG +
Preference number: 2 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISLSPSQ*PSLLVR
Trigger: CCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAG...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGAATCCCCGCAGCTGTaGAACAAAAAGCTCTGTCAT +
Preference number: 2 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRESPQL*NKKLCH
Trigger: ATGACAGAGCTTTTTGTTTCACAGCTGCGGGGATTC...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTAATCCCAATGGCCCCTaGGTTCATGGCCATGTTTAT +
Preference number: 2 (lower is better)
Translates to: CPARIAASETLRTQHLSSNPNGP*VHGHVY
Trigger: ATAAACATGGCCATGAACTCAGGGGCCATTGGGATT...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTAATCCCAATGGCCCCTaGGTTCATGGCCATGTTTAT +
Preference number: 2 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFNPNGP*VHGHVY
Trigger: ATAAACATGGCCATGAACTCAGGGGCCATTGGGATT...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGCACACAAAGGAGACCTaGCCCAGCAAGGGTCTCACT +
Preference number: 2 (lower is better)
Translates to: GELLVIRLATIQLIPWSLHTKET*PSKGLT
Trigger: AGTGAGACCCTTGCTGGGTCAGGTCTCCTTTGTGTG...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGAAGAATTGCTGCCTCTaGGACACTGAGGACTCAACA +
Preference number: 2 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQKNCCL*DTEDST
Trigger: TGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTT...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCAACCATCGCCCTTCATTaGCCTCACTCTTTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISTIALH*PHSFSF
Trigger: GAAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGT...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGTCCCTAGCTCCGTTGTaGTTACTGACCCTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: GELLVIRLATIQLIPWSLSLAPL*LLTLPS
Trigger: AGAGGGGAGGGTCAGTAAGCACAACGGAGCTAGGGA...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGTCACTTGCTGCAGCTaGCCTGATGCTGTGGTTGTG +
Preference number: 2 (lower is better)
Translates to: GELLVIRLATIQLIPWSLVTCCS*PDAVVV
Trigger: CACAACCACAGCATCAGGGCAGCTGCAGCAAGTGAC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGCTGAAGATGTGATTTaGACATTTTACGTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHAEDVI*TFYVKA
Trigger: TGCTTTCACGTAAAATGTCCAAATCACATCTTCAGC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGAAGCATCTGAGCCTTTaGTCACCAGCTGGCGAATTT +
Preference number: 2 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQKHLSL*SPAGEF
Trigger: AAATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTT...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCGATTTACTCATCAAGTaGTTAGTGCCTCCAAAGTAC +
Preference number: 2 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCDLLIK*LVPPKY
Trigger: GTACTTTGGAGGCACTAACCACTTGATGAGTAAATC...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGAGGCACCTGACTCGGTaGTTTACATACATTACCTCA +
Preference number: 2 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQRHLTR*FTYITS
Trigger: TGAGGTAATGTATGTAAAGCACCGAGTCAGGTGCCT...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGTCAGCTAGTCCAAGCTaGAACTCAGAGTCGCAAGAG +
Preference number: 2 (lower is better)
Translates to: GELLVIRLATIQLIPWSLSASPS*NSESQE
Trigger: CTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGA...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAATTTAGAGGGGTGCTTTaGCTGGGCCTTCAGATAAAG +
Preference number: 2 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQFRGVL*LGLQIK
Trigger: CTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAA...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGGGGGGAGTGAATGTCTaGATTCAAAACAGGTTACTT +
Preference number: 2 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQGGVNV*IQNRLL
Trigger: AAGTAACCTGTTTTGAATCCAGACATTCACTCCCCC...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGTTTGGACATTTTACGTaGAAGCAGTGCCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: GELLVIRLATIQLIPWSLFGHFT*KQCLVL
Trigger: CAGCACCAGGCACTGCTTTCACGTAAAATGTCCAAA...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACAAATCCCAATGGCCCCTaGGTTCATGGCCATGTTTAT +
Preference number: 2 (lower is better)
Translates to: YIHYLTARLANGHFDTHTNPNGP*VHGHVY
Trigger: ATAAACATGGCCATGAACTCAGGGGCCATTGGGATT...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGTGTAACTATGGGAGGTaGCAGGGAGGTGATGCAAAT +
Preference number: 2 (lower is better)
Translates to: GELLVIRLATIQLIPWSLCNYGR*QGGDAN
Trigger: ATTTGCATCACCTCCCTGGCACCTCCCATAGTTACA...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTTACAGGTGGATCTTTTaGAGGTTTTTGCATTTCCCC +
Preference number: 2 (lower is better)
Translates to: KNSQGYNITKTPNARDGTYRWIF*RFLHFP
Trigger: GGGGAAATGCAAAAACCTGCAAAAGATCCACCTGTA...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR GCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCAGAACAGGAGGGATaGATTTTAGGAAAAACATCA +
Preference number: 2 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRAEQEG*ILGKTS
Trigger: TGATGTTTTTCCTAAAATGCATCCCTCCTGTTCTGC...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTCACAGGGAATACAGGTaGATCTTTTGCAGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: KNSQGYNITKTPNARDGTHREYR*IFCRFL
Trigger: CAAAAACCTGCAAAAGATCCACCTGTATTCCCTGTG...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAAACCTCACAGCCAGGTTaGCAAATGGTCATTTTGACA +
Preference number: 2 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQTSQPG*QMVILT
Trigger: TGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGT...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 90 bp TGCTTTACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTaGACACACACACACAGGGAATACAGGTGGATCTTTTGCAGGTTT +
Preference number: 2 (lower is better)
Translates to: CFTYITSQPGWQMVI*THTHREYRWIFCRF
Trigger: AAACCTGCAAAAGATCCACCTGTATTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 90 bp TTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTaGCTACATATTCAACTTGGGCAGCTCCTTTTTGAGGCTGGTGGT +
Preference number: 2 (lower is better)
Translates to: LLVIRLATIQLIPWS*LHIQLGQLLFEAGG
Trigger: ACCACCAGCCTCAAAAAGGAGCTGCCCAAGTTGAATATGTAGCAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGACATCTAATCTAGTCTaGATTTTTGGCTGTGTAGAC +
Preference number: 2 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQTSNLV*IFGCVD
Trigger: GTCTACACAGCCAAAAATTCAGACTAGATTAGATGT...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR TCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAACATCTAATCTAGTCTaGATTTTTGGCTGTGTAGAC +
Preference number: 2 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRTSNLV*IFGCVD
Trigger: GTCTACACAGCCAAAAATTCAGACTAGATTAGATGT...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTGCTGAAGATGTGATTTaGACATTTTACGTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFAEDVI*TFYVKA
Trigger: TGCTTTCACGTAAAATGTCCAAATCACATCTTCAGC...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAACACAGGGAATACAGGTaGATCTTTTGCAGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQHREYR*IFCRFL
Trigger: CAAAAACCTGCAAAAGATCCACCTGTATTCCCTGTG...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 72 bp CCTGCCTGTGGGGTCCGCGGGCCCAGGCCCTGGACCTaGGGTAGGAACGGTCAGGAGGACTGCATCAGGCCC +
Preference number: 3 (lower is better)
Translates to: PACGVRGPRPWT*GRNGQEDCIRP
Trigger: GGGCCTGATGCAGTCCTCCTGACCGTTCCTACCGCAGGTCCAGGGCCTGGGCCCGCGGACCCCACAGGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554474.5
3UTR GCA 72 bp AGGCCCTGGACCTGCGGTAGGAACGGTCAGGAGGACTaGATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGAC +
Preference number: 3 (lower is better)
Translates to: RPWTCGRNGQED*IRPVRRLPASD
Trigger: GTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTTCCTACCGCAGGTCCAGGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554474.5
3UTR TCA 72 bp CTCGAACGCTGGACCCTTGAGACATGTGACGGGACCTaGGGGCAGCCACCGGGCTGGCGGGGACCTCTCCGA +
Preference number: 3 (lower is better)
Translates to: LERWTLETCDGT*GQPPGWRGPLR
Trigger: TCGGAGAGGTCCCCGCCAGCCCGGTGGCTGCCCTCAGGTCCCGTCACATGTCTCAAGGGTCCAGCGTTCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 72 bp CGCAAGAGGTCCCTCCCAGGATGCTGGCCCGGTACCTaGCCACTTAGCGGTGGTGAGCCTGGAGCGCAGGCC +
Preference number: 3 (lower is better)
Translates to: RKRSLPGCWPGT*PLSGGEPGAQA
Trigger: GGCCTGCGCTCCAGGCTCACCACCGCTAAGTGGTCAGGTACCGGGCCAGCATCCTGGGAGGGACCTCTTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 72 bp CTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTaGCAGCCCTGCAATCCAGCCACCTCCTGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: LTVPVRMPPRGG*QPCNPATSWAG
Trigger: CCCAGCCCAGGAGGTGGCTGGATTGCAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 72 bp GGTGCTGGCAGTGACACCCGGGTGGCCACAGAGACGTaGGGGATGACAGGCGGCGGTGGGGATGTAGTGGCT +
Preference number: 3 (lower is better)
Translates to: GAGSDTRVATET*GMTGGGGDVVA
Trigger: AGCCACTACATCCCCACCGCCGCCTGTCATCCCTCACGTCTCTGTGGCCACCCGGGTGTCACTGCCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 72 bp GGCAGCCACCGGGCTGGCGGGGACCTCTCCGAACGCTaGTCTCAAAGAGGGTGGAAAGACCTTGAGGCGGGG +
Preference number: 3 (lower is better)
Translates to: GSHRAGGDLSER*SQRGWKDLEAG
Trigger: CCCCGCCTCAAGGTCTTTCCACCCTCTTTGAGATCAGCGTTCGGAGAGGTCCCCGCCAGCCCGGTGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp GTGAGGCGCTTGCCCGCCAGCGACTTTCCCCACTGCTaGAAGGAAGCCACCTCGGGGGTGAAATGCAGCGGC +
Preference number: 3 (lower is better)
Translates to: VRRLPASDFPHC*KEATSGVKCSG
Trigger: GCCGCTGCATTTCACCCCCGAGGTGGCTTCCTTCCAGCAGTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554474.5
3UTR GCA 72 bp CCTGACCCAGCAAGGGTCTCACTGTGCCTGTCAGGATaGCACCACGTGGGGGCTGCCAGCCCTGCAATCCAG +
Preference number: 3 (lower is better)
Translates to: PDPARVSLCLSG*HHVGAASPAIQ
Trigger: CTGGATTGCAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTGCTGGGTCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTaGGGGCTGCCAGCCCTGCAATCCAGCCACCTCCTG +
Preference number: 3 (lower is better)
Translates to: QGSHCACQDATT*GLPALQSSHLL
Trigger: CAGGAGGTGGCTGGATTGCAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 72 bp AGGGCACTGAGGTGCCTGCTGCTTGGGAACACCCTTTaGCCTATGCCTAGGGGTCAGCACAGCCCGGGGATC +
Preference number: 3 (lower is better)
Translates to: RALRCLLLGNTL*PMPRGQHSPGI
Trigger: GATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCCCAAGCAGCAGGCACCTCAGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCTCGAACGCTGGACCCTaGAGACATGTGACGGGACCT +
Preference number: 3 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSSNAGP*RHVTGP
Trigger: AGGTCCCGTCACATGTCTCAAGGGTCCAGCGTTCGA...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAAGGCCCGTGAGGCGCTaGCCCGCCAGCGACTTTCCC +
Preference number: 3 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSRPVRR*PASDFP
Trigger: GGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCT...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554474.5
3UTR CCA 72 bp GGTGGCCACAGAGACGTGAGGGATGACAGGCGGCGGTaGGGATGTAGTGGCTGTAACTATGGGAGGTGCCAG +
Preference number: 3 (lower is better)
Translates to: GGHRDVRDDRRR*GCSGCNYGRCQ
Trigger: CTGGCACCTCCCATAGTTACAGCCACTACATCCCCACCGCCGCCTGTCATCCCTCACGTCTCTGTGGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp GCCAGCTCCATCTCAGGGCCACAGTCCACCTGGCTCTaGTCAGATCCTCTGGGGATCTCCAGGGTGAGACCA +
Preference number: 3 (lower is better)
Translates to: ASSISGPQSTWL*SDPLGISRVRP
Trigger: TGGTCTCACCCTGGAGATCCCCAGAGGATCTGACCAGAGCCAGGTGGACTGTGGCCCTGAGATGGAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp GCCTGGAGCGCAGGCCCAGCTGACTGCACTGGCAGTTaGGCCCTGCTTTGTTCCTGGGGTATAGCAACACCT +
Preference number: 3 (lower is better)
Translates to: AWSAGPADCTGS*ALLCSWGIATP
Trigger: AGGTGTTGCTATACCCCAGGAACAAAGCAGGGCCCAACTGCCAGTGCAGTCAGCTGGGCCTGCGCTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGCACCATCGCCCTTCATaGCCCTCACTCTTTCTCCTT +
Preference number: 3 (lower is better)
Translates to: QGSHCACQDATTWGLPALHHRPS*PSLFLL
Trigger: AAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGTG...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCGCCAGTGGGGGAAACTaGGGCATGGTAGTCAAGAAC +
Preference number: 3 (lower is better)
Translates to: GTPFALCLGVSTARGSLGASGGN*GMVVKN
Trigger: GTTCTTGACTACCATGCCCAAGTTTCCCCCACTGGC...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 72 bp CCCTGTGGCCTGGCCTGGTCCCTTCGTAGCATACTCTaGCCCAGCTTCACACACAAAGGAGACCTGACCCAG +
Preference number: 3 (lower is better)
Translates to: PCGLAWSLRSIL*PSFTHKGDLTQ
Trigger: CTGGGTCAGGTCTCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCCACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp TGCCTGGTGCCTTGTGTGTCTAACCCGACGGGTGGGTaGTCACTTGCTGCAGCTGCCCTGATGCTGTGGTTG +
Preference number: 3 (lower is better)
Translates to: CLVPCVSNPTGG*SLAAAALMLWL
Trigger: CAACCACAGCATCAGGGCAGCTGCAGCAAGTGACCACCCACCCGTCGGGTTAGACACACAAGGCACCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCCAAGCATCTGAGCCTTaGGTCACCAGCTGGCGAATT +
Preference number: 3 (lower is better)
Translates to: GTPFALCLGVSTARGSLGQASEP*VTSWRI
Trigger: AATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTTG...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCAGACATAGACAGGACTaGGAGGTGGTGGGGTGGAAA +
Preference number: 3 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSRHRQD*EVVGWK
Trigger: TTTCCACCCCACCACCTCCAAGTCCTGTCTATGTCT...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp CTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCTCTaGATGTCCCCAGAGGTGCTTGTAAGCCTGCAGCCA +
Preference number: 3 (lower is better)
Translates to: LPSSVVLTDPPL*MSPEVLVSLQP
Trigger: TGGCTGCAGGCTTACAAGCACCTCTGGGGACATCCAGAGGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTTCATGCCTCTTGAATTaGCCAGAAGGTGTGACCGTC +
Preference number: 3 (lower is better)
Translates to: PFALCLGVSTARGSLGKASCLLN*PEGVTV
Trigger: GACGGTCACACCTTCTGGCAAATTCAAGAGGCATGA...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGTCTCCCTAGCTCCGTaGTGCTTACTGACCCTCCCC +
Preference number: 3 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHVSLAP*CLLTLP
Trigger: GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGAC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 72 bp CGGCGGTGGGGATGTAGTGGCTGTAACTATGGGAGGTaGCAGGGAGGTGATGCAAATGCTGGATGTGCTCTC +
Preference number: 3 (lower is better)
Translates to: RRWGCSGCNYGR*QGGDANAGCAL
Trigger: GAGAGCACATCCAGCATTTGCATCACCTCCCTGGCACCTCCCATAGTTACAGCCACTACATCCCCACCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp GGACAGGGCTGTGTGGAAGCAGACATAGACAGGACTTaGAGGTGGTGGGGTGGAAAGATGGGTCACTGGGGA +
Preference number: 3 (lower is better)
Translates to: GQGCVEADIDRT*RWWGGKMGHWG
Trigger: TCCCCAGTGACCCATCTTTCCACCCCACCACCTCCAAGTCCTGTCTATGTCTGCTTCCACACAGCCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTCACCATCGCCCTTCATaGCCCTCACTCTTTCTCCTT +
Preference number: 3 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLHHRPS*PSLFLL
Trigger: AAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGTG...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATTCGAACGCTGGACCCTaGAGACATGTGACGGGACCT +
Preference number: 3 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHSNAGP*RHVTGP
Trigger: AGGTCCCGTCACATGTCTCAAGGGTCCAGCGTTCGA...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCTGGCAAATGGTCATTTaGACACACACACACAGGGAA +
Preference number: 3 (lower is better)
Translates to: GTPFALCLGVSTARGSLGWQMVI*THTHRE
Trigger: TTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCCA...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCGTAGGGGAATTTGCTTaGCTACAGAATTGCCTGCAA +
Preference number: 3 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSVGEFA*LQNCLQ
Trigger: TTGCAGGCAATTCTGTAGCAAAGCAAATTCCCCTAC...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 72 bp ATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTaGATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGA +
Preference number: 3 (lower is better)
Translates to: IVVTGTPRRVLP*MSWDQGLLASG
Trigger: TCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR TCA 72 bp GCATACTCTGCCCCAGCTTCACACACAAAGGAGACCTaGCCCAGCAAGGGTCTCACTGTGCCTGTCAGGATG +
Preference number: 3 (lower is better)
Translates to: AYSAPASHTKET*PSKGLTVPVRM
Trigger: CATCCTGACAGGCACAGTGAGACCCTTGCTGGGTCAGGTCTCCTTTGTGTGTGAAGCTGGGGCAGAGTATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 72 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTaGTTACTGACCCTCCCCTCTGGATGTCCCCAGAGG +
Preference number: 3 (lower is better)
Translates to: GLSPSEVSLAPL*LLTLPSGCPQR
Trigger: CCTCTGGGGACATCCAGAGGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 72 bp CTGGAGCATGTCCCCATGTGTTCAGCTAGTCCAAGCTaGAACTCAGAGTCGCAAGAGGTCCCTCCCAGGATG +
Preference number: 3 (lower is better)
Translates to: LEHVPMCSASPS*NSESQEVPPRM
Trigger: CATCCTGGGAGGGACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATGCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp GCATTTCCCCTAGGTGACCGGTTTAGAGGGGTGCTTTaGCTGGGCCTTCAGATAAAGACTGGGAGGAGAGCC +
Preference number: 3 (lower is better)
Translates to: AFPLGDRFRGVL*LGLQIKTGRRA
Trigger: GGCTCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTCACCTAGGGGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp TGGCCCCTGGGTCTAGCCCAGGGGATGCCTTATCACTaGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCT +
Preference number: 3 (lower is better)
Translates to: WPLGLAQGMPYH*VVLMSRLLASA
Trigger: AGCAGATGCCAGCAACCTACTCATTAGTACCACCCAGTGATAAGGCATCCCCTGGGCTAGACCCAGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCGTGGTAGATGGACCTaGGATAGGCAGCCTCGTTCC +
Preference number: 3 (lower is better)
Translates to: GCGWTFICASLQAFLFPCRGRWT*DRQPRS
Trigger: GGAACGAGGCTGCCTATCCAAGGTCCATCTACCACG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCCGTGGTAGATGGACCTaGGATAGGCAGCCTCGTTCC +
Preference number: 3 (lower is better)
Translates to: HVPMCSASPSCNSESQEVRGRWT*DRQPRS
Trigger: GGAACGAGGCTGCCTATCCAAGGTCCATCTACCACG...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGTGCTGGCATCTGCTGTaGCTATGGTTACACGAGCAC +
Preference number: 3 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLCWHLL*LWLHEH
Trigger: GTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCA...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 72 bp CTCCGAACGCTGATCTCAAAGAGGGTGGAAAGACCTTaGGGCGGGGCAATCCGTGAGGTTGCTTTCTTGCTG +
Preference number: 3 (lower is better)
Translates to: LRTLISKRVERP*GGAIREVAFLL
Trigger: CAGCAAGAAAGCAACCTCACGGATTGCCCCGCCTCAAGGTCTTTCCACCCTCTTTGAGATCAGCGTTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp AGCCCAGAGAGTTCCTGCTGCTTAGTTCAGGCCATCTaGCTGCGGCTGGACGTTTATATGTGCCAGCCTACA +
Preference number: 3 (lower is better)
Translates to: SPESSCCLVQAI*LRLDVYMCQPT
Trigger: TGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp TTGAAATCCCAGGAATCCTGCCAGGGAAGAAGCCCCTaGAGCATGTCCCCATGTGTTCAGCTAGTCCAAGCT +
Preference number: 3 (lower is better)
Translates to: LKSQESCQGRSP*SMSPCVQLVQA
Trigger: AGCTTGGACTAGCTGAACACATGGGGACATGCTCCAGGGGCTTCTTCCCTGGCAGGATTCCTGGGATTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCGTCCACTCATGCCTCTaGAATTTGCCAGAAGGTGTG +
Preference number: 3 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPVHSCL*NLPEGV
Trigger: CACACCTTCTGGCAAATTCAAGAGGCATGAGTGGAC...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCCAAGCATCTGAGCCTTaGGTCACCAGCTGGCGAATT +
Preference number: 3 (lower is better)
Translates to: HVPMCSASPSCNSESQEVQASEP*VTSWRI
Trigger: AATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTTG...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 72 bp TCGCCCTTCATTGCCCTCACTCTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAG +
Preference number: 3 (lower is better)
Translates to: SPFIALTLSPSQ*PSLLVRKLCPQ
Trigger: CTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGGGCAATGAAGGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR GCA 72 bp GTGATGCAAATGCTGGATGTGCTCTCGGTCCACTCATaGCTCTTGAATTTGCCAGAAGGTGTGACCGTCTCC +
Preference number: 3 (lower is better)
Translates to: VMQMLDVLSVHS*LLNLPEGVTVS
Trigger: GGAGACGGTCACACCTTCTGGCAAATTCAAGAGGCATGAGTGGACCGAGAGCACATCCAGCATTTGCATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 72 bp GGGGGACGGGCCAAGACCAGATTTTCCAAATGTACTTaGATGACCAAGTTCTGCGTGGTAGATGGACCTTGG +
Preference number: 3 (lower is better)
Translates to: GGRAKTRFSKCT*MTKFCVVDGPW
Trigger: CCAAGGTCCATCTACCACGCAGAACTTGGTCATGCAAGTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 72 bp CTGGACCTTGCAGCAACACCTCCCTCCAATACATTCTaGAGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTC +
Preference number: 3 (lower is better)
Translates to: LDLAATPPSNTF*RAQRKRALNPF
Trigger: GAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCTGCAGAATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp AGGCAGCCTCGTTCCACTCCCTTCTTGCAAAGCTTCTaGCTTGATCTACTGGGGAACATGAGTGCCTTAGCT +
Preference number: 3 (lower is better)
Translates to: RQPRSTPFLQSF*LDLLGNMSALA
Trigger: AGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCTTTGCAAGAAGGGAGTGGAACGAGGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTCATGCCTCTTGAATTaGCCAGAAGGTGTGACCGTC +
Preference number: 3 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSSCLLN*PEGVTV
Trigger: GACGGTCACACCTTCTGGCAAATTCAAGAGGCATGA...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCGTCCACTCATGCCTCTaGAATTTGCCAGAAGGTGTG +
Preference number: 3 (lower is better)
Translates to: HVPMCSASPSCNSESQEVVHSCL*NLPEGV
Trigger: CACACCTTCTGGCAAATTCAAGAGGCATGAGTGGAC...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGTCGAACGCTGGACCCTaGAGACATGTGACGGGACCT +
Preference number: 3 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQSNAGP*RHVTGP
Trigger: AGGTCCCGTCACATGTCTCAAGGGTCCAGCGTTCGA...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 72 bp GAGCATGTGCAGGTGTCCAGCAAGAATTGCTGCCTCTaGGACACTGAGGACTCAACATCTGTCATCTCTCTG +
Preference number: 3 (lower is better)
Translates to: EHVQVSSKNCCL*DTEDSTSVISL
Trigger: CAGAGAGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACACCTGCACATGCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 72 bp AAGAGAACCACATGCACTAAGAGGAGGCCATTCCGATaGGTCCGTGATCATGCGGTGAGTGGGCTTAGAGTA +
Preference number: 3 (lower is better)
Translates to: KRTTCTKRRPFR*VRDHAVSGLRV
Trigger: TACTCTAAGCCCACTCACCGCATGATCACGGACTCATCGGAATGGCCTCCTCTTAGTGCATGTGGTTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 72 bp CTCTGGTTTCCACTGTACCTCCAAGAGAGGAACCATTaGCAGTGGGGGAAACTTGGGCATGGTAGTCAAGAA +
Preference number: 3 (lower is better)
Translates to: LWFPLYLQERNH*QWGKLGHGSQE
Trigger: TTCTTGACTACCATGCCCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTGGAGGTACAGTGGAAACCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTaGAGTGTTGGAATACAACTGTACAAAGAAGAGAGG +
Preference number: 3 (lower is better)
Translates to: PLNELGSGPLSE*SVGIQLYKEER
Trigger: CCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR CCA 72 bp AGGCCGGGTCTGCAAATAAGCAAGCATCTGAGCCTTTaGTCACCAGCTGGCGAATTTGGCTGCATGAGAAAA +
Preference number: 3 (lower is better)
Translates to: RPGLQISKHLSL*SPAGEFGCMRK
Trigger: TTTTCTCATGCAGCCAAATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTTGCTTATTTGCAGACCCGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp ACTTGCATGACCAAGTTCTGCGTGGTAGATGGACCTTaGATAGGCAGCCTCGTTCCACTCCCTTCTTGCAAA +
Preference number: 3 (lower is better)
Translates to: TCMTKFCVVDGP*IGSLVPLPSCK
Trigger: TTTGCAAGAAGGGAGTGGAACGAGGCTGCCTATCCAAGGTCCATCTACCACGCAGAACTTGGTCATGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp CAAATGTACTTGCATGACCAAGTTCTGCGTGGTAGATaGACCTTGGATAGGCAGCCTCGTTCCACTCCCTTC +
Preference number: 3 (lower is better)
Translates to: QMYLHDQVLRGR*TLDRQPRSTPF
Trigger: GAAGGGAGTGGAACGAGGCTGCCTATCCAAGGTCCATCTACCACGCAGAACTTGGTCATGCAAGTACATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTCACCATCGCCCTTCATaGCCCTCACTCTTTCTCCTT +
Preference number: 3 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFHHRPS*PSLFLL
Trigger: AAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGTG...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTCAAGCATCTGAGCCTTaGGTCACCAGCTGGCGAATT +
Preference number: 3 (lower is better)
Translates to: CPARIAASETLRTQHLSSQASEP*VTSWRI
Trigger: AATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTTG...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCATTATTGCTCTGGGTTaGAGTCCATCTGAAGTCTCC +
Preference number: 3 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCIIALG*SPSEVS
Trigger: GGAGACTTCAGATGGACTCAAACCCAGAGCAATAAT...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCGTAGGGGAATTTGCTTaGCTACAGAATTGCCTGCAA +
Preference number: 3 (lower is better)
Translates to: HVPMCSASPSCNSESQEVVGEFA*LQNCLQ
Trigger: TTGCAGGCAATTCTGTAGCAAAGCAAATTCCCCTAC...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCTGCTACATATTCAACTaGGGCAGCTCCTTTTTGAGG +
Preference number: 3 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCCYIFN*GSSFLR
Trigger: CCTCAAAAAGGAGCTGCCCAAGTTGAATATGTAGCA...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 72 bp AAAGAGGGTGGAAAGACCTTGAGGCGGGGCAATCCGTaGGGTTGCTTTCTTGCTGAAGATGTGATTTGGACA +
Preference number: 3 (lower is better)
Translates to: KEGGKTLRRGNP*GCFLAEDVIWT
Trigger: TGTCCAAATCACATCTTCAGCAAGAAAGCAACCTCACGGATTGCCCCGCCTCAAGGTCTTTCCACCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 72 bp ACACGAGCACAGGCCTCTCTTCAGAGGGTCCCATGGTaGGTTATTAGTGATTCGTCTGGCCACTATTCAACT +
Preference number: 3 (lower is better)
Translates to: TRAQASLQRVPW*VISDSSGHYST
Trigger: AGTTGAATAGTGGCCAGACGAATCACTAATAACTCACCATGGGACCCTCTGAAGAGAGGCCTGTGCTCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp TTTCCACTGTACCTCCAAGAGAGGAACCATTGCCAGTaGGGGAAACTTGGGCATGGTAGTCAAGAACTCACA +
Preference number: 3 (lower is better)
Translates to: FPLYLQERNHCQ*GKLGHGSQELT
Trigger: TGTGAGTTCTTGACTACCATGCCCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTGGAGGTACAGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp GCCCTTTATTGCTACATTTGCTACTTTGCTACTTTATaGCCCCTGGGTCTAGCCCAGGGGATGCCTTATCAC +
Preference number: 3 (lower is better)
Translates to: ALYCYICYFATL*PLGLAQGMPYH
Trigger: GTGATAAGGCATCCCCTGGGCTAGACCCAGGGGCCATAAAGTAGCAAAGTAGCAAATGTAGCAATAAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCTTAGCGAGTGGAGTGTaGGAATACAACTGTACAAAG +
Preference number: 3 (lower is better)
Translates to: HVPMCSASPSCNSESQEVLASGV*EYNCTK
Trigger: CTTTGTACAGTTGTATTCCAACACTCCACTCGCTAA...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTCAAGCATCTGAGCCTTaGGTCACCAGCTGGCGAATT +
Preference number: 3 (lower is better)
Translates to: KNSQGYNITKTPNARDGTQASEP*VTSWRI
Trigger: AATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTTG...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGGTCCACTCATGCCTCTaGAATTTGCCAGAAGGTGTG +
Preference number: 3 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLVHSCL*NLPEGV
Trigger: CACACCTTCTGGCAAATTCAAGAGGCATGAGTGGAC...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGCCAAGAGAGGAACCATaGCCAGTGGGGGAAACTTGG +
Preference number: 3 (lower is better)
Translates to: GELLVIRLATIQLIPWSLPREEP*PVGETW
Trigger: CCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTGG...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGTTAGCGAGTGGAGTGTaGGAATACAACTGTACAAAG +
Preference number: 3 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGLASGV*EYNCTK
Trigger: CTTTGTACAGTTGTATTCCAACACTCCACTCGCTAA...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTTACCTCACAGCCAGGTaGGCAAATGGTCATTTTGAC +
Preference number: 3 (lower is better)
Translates to: KNSQGYNITKTPNARDGTYLTAR*ANGHFD
Trigger: GTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTA...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAATTATTGCTCTGGGTTaGAGTCCATCTGAAGTCTCC +
Preference number: 3 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRIIALG*SPSEVS
Trigger: GGAGACTTCAGATGGACTCAAACCCAGAGCAATAAT...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGTAGGGGAATTTGCTTaGCTACAGAATTGCCTGCAA +
Preference number: 3 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRVGEFA*LQNCLQ
Trigger: TTGCAGGCAATTCTGTAGCAAAGCAAATTCCCCTAC...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 72 bp CTTGAGGCGGGGCAATCCGTGAGGTTGCTTTCTTGCTaGAGATGTGATTTGGACATTTTACGTGAAAGCAGT +
Preference number: 3 (lower is better)
Translates to: LEAGQSVRLLSC*RCDLDILRESS
Trigger: ACTGCTTTCACGTAAAATGTCCAAATCACATCTTCAGCAAGAAAGCAACCTCACGGATTGCCCCGCCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACATCATGCCTCTTGAATTaGCCAGAAGGTGTGACCGTC +
Preference number: 3 (lower is better)
Translates to: YIHYLTARLANGHFDTHTSCLLN*PEGVTV
Trigger: GACGGTCACACCTTCTGGCAAATTCAAGAGGCATGA...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp TTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTaGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATT +
Preference number: 3 (lower is better)
Translates to: FPHHFCCRRLQG*VKCCLGCSISI
Trigger: AATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
3UTR TCA 72 bp ACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTaGCACACACACACAGGGAATACAGGTGGATCTTTT +
Preference number: 3 (lower is better)
Translates to: TLPHSQVGKWSF*HTHTGNTGGSF
Trigger: AAAAGATCCACCTGTATTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 72 bp TTGCTACAGAATTGCCTGCAAACATCTAATCTAGTCTaGATTTTTGGCTGTGTAGACCAGGCCAATGGGGGA +
Preference number: 3 (lower is better)
Translates to: LLQNCLQTSNLV*IFGCVDQANGG
Trigger: TCCCCCATTGGCCTGGTCTACACAGCCAAAAATTCAGACTAGATTAGATGTTTGCAGGCAATTCTGTAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 72 bp TTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTaGTACATATTCAACTTGGGCAGCTCCTTTTTGAGG +
Preference number: 3 (lower is better)
Translates to: FVWPLFNLSHGL*YIFNLGSSFLR
Trigger: CCTCAAAAAGGAGCTGCCCAAGTTGAATATGTAGCAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR GCA 72 bp ACAGAGCACGTATCAGAATTCCCCCACCACTTTTGCTaGAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTT +
Preference number: 3 (lower is better)
Translates to: TEHVSEFPHHFC*RRLQGWVKCCL
Trigger: AAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
3UTR CCA 72 bp AGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTaGATTCAAAACAGGTTACTTAATACAGCTCTGTCT +
Preference number: 3 (lower is better)
Translates to: RRVVIASGGVNV*IQNRLLNTALS
Trigger: AGACAGAGCTGTATTAAGTAACCTGTTTTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGTGGCAAATGGTCATTTaGACACACACACACAGGGAA +
Preference number: 3 (lower is better)
Translates to: GELLVIRLATIQLIPWSLWQMVI*THTHRE
Trigger: TTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCCA...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CCA 72 bp TTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATaGTCTTTGCTACATATTCAACTTGGGCAGCTCCTT +
Preference number: 3 (lower is better)
Translates to: LVIRLATIQLIP*SLLHIQLGQLL
Trigger: AAGGAGCTGCCCAAGTTGAATATGTAGCAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR TCA 72 bp AAAGACCCCATAACTTGGAATGGGGCTTTATGCCATTaGTTTACTCATCAAGTGGTTAGTGCCTCCAAAGTA +
Preference number: 3 (lower is better)
Translates to: KDPITWNGALCH*FTHQVVSASKV
Trigger: TACTTTGGAGGCACTAACCACTTGATGAGTAAATCAATGGCATAAAGCCCCATTCCAAGTTATGGGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR-3UTR CAA 90 bp AATTATTTAGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGGGGTTAAGTGTTGTCTaGGATGCTCCATCTCCATTT +
Preference number: 3 (lower is better)
Translates to: NYLELWMPQNLLVLTRTEGLSVV*DAPSPF
Trigger: AAATGGAGATGGAGCATCCAAGACAACACTTAACCC...CTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCTAAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp CGGTCAGGAGGACTGCATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCCGCGGGCCCAGGCCCTaGACCTGCGGTAGGAACGGT +
Preference number: 4 (lower is better)
Translates to: RSGGLHQAREALARQRLSRGPRP*TCGRNG
Trigger: ACCGTTCCTACCGCAGGTCCAGGGCCTGGGCCCGCG...GGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR CCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCCGCGGGCCCAGGCCCTaGACCTGCGGTAGGAACGGT +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGRGPRP*TCGRNG
Trigger: ACCGTTCCTACCGCAGGTCCAGGGCCTGGGCCCGCG...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGCTGTGCCTGTCAGGATaGCACCACGTGGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALLCLSG*HHVGAA
Trigger: GGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAG...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGGCGATGGCACTGCTGTaGGGGACAGAAGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALAMALL*GTEGWC
Trigger: GCACCAGCCTTCTGTCCCTCACAGCAGTGCCATCGC...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCGCGGGCCCAGGCCCTaGACCTGCGGTAGGAACGGT +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRRGPRP*TCGRNG
Trigger: ACCGTTCCTACCGCAGGTCCAGGGCCTGGGCCCGCG...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTGGGCAGCCACCGGGCTaGCGGGGACCTCTCCGAACG +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFGQPPG*RGPLRT
Trigger: CGTTCGGAGAGGTCCCCGCCAGCCCGGTGGCTGCCC...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGAACCCGACGGGTGGGTaGTCACTTGCTGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALNPTGG*SLAAAA
Trigger: GGCAGCTGCAGCAAGTGACCACCCACCCGTCGGGTT...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CGGTCAGGAGGACTGCATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCATGCACCGGGCTCTGTaGCTGGGACTCTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RSGGLHQAREALARQRLSMHRAL*LGLFSH
Trigger: GTGACTGAAGAGTCCCAGGCACAGAGCCCGGTGCAT...GGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR CCA 90 bp GAGGACTGCATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCCCACTGCCCTGGCACAGGCCTGTaGACATCCCAAAAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: EDCIRPVRRLPASDFPHCPGTGL*TSQKAR
Trigger: ACGAGCCTTTTGGGATGTCCACAGGCCTGTGCCAGG...GCAGTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCGCGGGCCCAGGCCCTaGACCTGCGGTAGGAACGGT +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFRGPRP*TCGRNG
Trigger: ACCGTTCCTACCGCAGGTCCAGGGCCTGGGCCCGCG...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTGGGAGGAGAGCCCTGTaGCCTGGCCTGGTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPGRRAL*PGLVPS
Trigger: CGAAGGGACCAGGCCAGGCCACAGGGCTCTCCTCCC...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAGGACTGCATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCCCACTGCTGGAGAACTCTCCTCTaGGTCAGCAACCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: EDCIRPVRRLPASDFPHCWRTLL*VSNPHC
Trigger: GCAGTGGGGGTTGCTGACCCAGAGGAGAGTTCTCCA...GCAGTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554474.5
3UTR CAA 72 bp AACGGTCAGGAGGACTGCATCAGGCCCGTGAGGCGCTaGCCCGCCAGCGACTTTCCCCACTGCTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: NGQEDCIRPVRR*PASDFPHCWKE
Trigger: TTCCTTCCAGCAGTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR TCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCAGAGACGTGAGGGATaGCAGGCGGCGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLQRREG*QAAVGM
Trigger: CATCCCCACCGCCGCCTGTCATCCCTCACGTCTCTG...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGGTGGCCACAGAGACGTaGGGGATGACAGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLVATET*GMTGGG
Trigger: ACCGCCGCCTGTCATCCCTCACGTCTCTGTGGCCAC...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTGTGGCCACAGAGACGTaGGGGATGACAGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPVATET*GMTGGG
Trigger: ACCGCCGCCTGTCATCCCTCACGTCTCTGTGGCCAC...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACGTGGCCACAGAGACGTaGGGGATGACAGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHVATET*GMTGGG
Trigger: ACCGCCGCCTGTCATCCCTCACGTCTCTGTGGCCAC...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAGGGTGGAAAGACCTTaGGGCGGGGCAATCCGTGAG +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGRVERP*GGAIRE
Trigger: CTCACGGATTGCCCCGCCTCAAGGTCTTTCCACCCT...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCACATGTGACGGGACCTaGGGGCAGCCACCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSTCDGT*GQPPGW
Trigger: CCAGCCCGGTGGCTGCCCTCAGGTCCCGTCACATGT...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTCCCAGGCCCTGGACCTaGGGTAGGAACGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPPRPWT*GRNGQE
Trigger: CTCCTGACCGTTCCTACCGCAGGTCCAGGGCCTGGG...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCCACCACGTGGGGGCTaGCAGCCCTGCAATCCAGCC +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFPPRGG*QPCNPA
Trigger: GGCTGGATTGCAGGGCTGGCAGCCCCCACGTGGTGG...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCGCGGGCCCAGGCCCTaGACCTGCGGTAGGAACGGT +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLRGPRP*TCGRNG
Trigger: ACCGTTCCTACCGCAGGTCCAGGGCCTGGGCCCGCG...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCGGGCAGCCACCGGGCTaGCGGGGACCTCTCCGAACG +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPGQPPG*RGPLRT
Trigger: CGTTCGGAGAGGTCCCCGCCAGCCCGGTGGCTGCCC...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAGAAGGCTGGTGCCCTaGGGACAGGGCTGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGRRLVP*GQGCVE
Trigger: TTCCACACAGCCCTGTCCCCAGGGCACCAGCCTTCT...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTGGGCCACAGTCCACCTaGCTCTGGTCAGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: PFALCLGVSTARGSLGKAGPQST*LWSDPL
Trigger: CAGAGGATCTGACCAGAGCCAGGTGGACTGTGGCCC...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGGCTGCCCTGATGCTGTaGTTGTGGGGCTGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALAALML*LWGCQD
Trigger: ATCTTGGCAGCCCCACAACCACAGCATCAGGGCAGC...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACTCCGAGTTTCCGTGGTaGCGAGCGCAGGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHSEFPW*RAQGLS
Trigger: GCTGAGCCCCTGCGCTCGCCACCACGGAAACTCGGA...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS-3UTR TCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCAGAGACGTGAGGGATaGCAGGCGGCGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFQRREG*QAAVGM
Trigger: CATCCCCACCGCCGCCTGTCATCCCTCACGTCTCTG...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTACATGTGACGGGACCTaGGGGCAGCCACCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPTCDGT*GQPPGW
Trigger: CCAGCCCGGTGGCTGCCCTCAGGTCCCGTCACATGT...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGCACACAAAGGAGACCTaGCCCAGCAAGGGTCTCACT +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALHTKET*PSKGLT
Trigger: AGTGAGACCCTTGCTGGGTCAGGTCTCCTTTGTGTG...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCGCGATGGCACTGCTGTaGGGGACAGAAGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRAMALL*GTEGWC
Trigger: GCACCAGCCTTCTGTCCCTCACAGCAGTGCCATCGC...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCTGCTGGCCCGGTACCTaGCCACTTAGCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRCWPGT*PLSGGE
Trigger: CTCACCACCGCTAAGTGGTCAGGTACCGGGCCAGCA...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCGACAGCAGCTGGCTCTaGGCCCTCATCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRDSSWL*ALIGAG
Trigger: CCCAGCCCCGATGAGGGCTCAGAGCCAGCTGCTGTC...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGATTCCGATGAGTCCGTaGTCATGCGGTGAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALIPMSP*SCGEWA
Trigger: AGCCCACTCACCGCATGATCACGGACTCATCGGAAT...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTAACGGTCAGGAGGACTaGATCAGGCCCGTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPNGQED*IRPVRR
Trigger: GCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTT...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCCCCAGGCCCTGGACCTaGGGTAGGAACGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSPRPWT*GRNGQE
Trigger: CTCCTGACCGTTCCTACCGCAGGTCCAGGGCCTGGG...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTCTGTGCCTGTCAGGATaGCACCACGTGGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLLCLSG*HHVGAA
Trigger: GGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAG...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCACACCCTTTGCCCTATaGCTAGGGGTCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSTPFAL*LGVSTA
Trigger: GGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGT...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTGATGACAGGCGGCGGTaGGGATGTAGTGGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: PFALCLGVSTARGSLGKADDRRR*GCSGCN
Trigger: GTTACAGCCACTACATCCCCACCGCCGCCTGTCATC...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTGCAGTGACACCCGGGTaGCCACAGAGACGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPAVTPG*PQRREG
Trigger: TCCCTCACGTCTCTGTGGCCACCCGGGTGTCACTGC...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTGGGCAGCCACCGGGCTaGCGGGGACCTCTCCGAACG +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCGQPPG*RGPLRT
Trigger: CGTTCGGAGAGGTCCCCGCCAGCCCGGTGGCTGCCC...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGGGAAAGATGGGTCACTaGGGAGCACCCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLGKMGH*GAPRRP
Trigger: CGGCCTCCTGGGTGCTCCCCAGTGACCCATCTTTCC...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGGAGTTTCCCAGCTCCTaGACCTTGCAGCAACACCTC +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALEFPSS*TLQQHL
Trigger: GAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTC...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAAGCCCTCATCGGGGCTaGGGAGAGGGCCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGSPHRG*GEGQVL
Trigger: CAGGACTTGGCCCTCTCCCCAGCCCCGATGAGGGCT...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 72 bp ATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATaGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: MRVSASSKGAPP*ASSSRGIDRRP
Trigger: TGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR TCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGCCTGGTGCTGGCAGTaGCACCCGGGTGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHAWCWQ*HPGGHR
Trigger: TCTGTGGCCACCCGGGTGTCACTGCCAGCACCAGGC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCAGGGTGGAAAGACCTTaGGGCGGGGCAATCCGTGAG +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRRVERP*GGAIRE
Trigger: CTCACGGATTGCCCCGCCTCAAGGTCTTTCCACCCT...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCACATGTGACGGGACCTaGGGGCAGCCACCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPTCDGT*GQPPGW
Trigger: CCAGCCCGGTGGCTGCCCTCAGGTCCCGTCACATGT...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATACATGTGACGGGACCTaGGGGCAGCCACCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHTCDGT*GQPPGW
Trigger: CCAGCCCGGTGGCTGCCCTCAGGTCCCGTCACATGT...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGAGACAGCAGCTGGCTCTaGGCCCTCATCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRDSSWL*ALIGAG
Trigger: CCCAGCCCCGATGAGGGCTCAGAGCCAGCTGCTGTC...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCGACAGCAGCTGGCTCTaGGCCCTCATCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPDSSWL*ALIGAG
Trigger: CCCAGCCCCGATGAGGGCTCAGAGCCAGCTGCTGTC...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCAACGGTCAGGAGGACTaGATCAGGCCCGTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSNGQED*IRPVRR
Trigger: GCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTT...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTAACGGTCAGGAGGACTaGATCAGGCCCGTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFNGQED*IRPVRR
Trigger: GCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTT...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGCGGTAGGAACGGTCAGGAGGACTGCATCAGGCCCGTGAGGCGCTTGCCCGCCACCATCGCCCTTCATTaGCCTCACTCTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CGRNGQEDCIRPVRRLPATIALH*PHSFSF
Trigger: GAAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGT...GGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTTCCTACCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR GCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGACCACCACGTGGGGGCTaGCAGCCCTGCAATCCAGCC +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGPPRGG*QPCNPA
Trigger: GGCTGGATTGCAGGGCTGGCAGCCCCCACGTGGTGG...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTTGCCCGCGATGGCACTaGTGTGAGGGACAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPCPRWH*CEGQKA
Trigger: AGCCTTCTGTCCCTCACAGCAGTGCCATCGCGGGCA...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACGGGTGGGTGGTCACTTaGTGCAGCTGCCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHGWVVT*CSCPDA
Trigger: AGCATCAGGGCAGCTGCAGCAAGTGACCACCCACCC...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCGATGCCAGTGCCTGGTaGCTTGTGTGTCTAACCCGA +
Preference number: 4 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSDASAW*LVCLTR
Trigger: TCGGGTTAGACACACAAGGCACCAGGCACTGGCATC...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTACCGGGCTCTGTGCCTaGGACTCTTCAGTCACGCCA +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPTGLCA*DSSVTP
Trigger: TGGCGTGACTGAAGAGTCCCAGGCACAGAGCCCGGT...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTGACAGGACTTGGAGGTaGTGGGGTGGAAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: PFALCLGVSTARGSLGKADRTWR*WGGKMG
Trigger: ACCCATCTTTCCACCCCACCACCTCCAAGTCCTGTC...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCAGGCCCCTTGCCCTaGATAACTGAGGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLPGPLP*ITEGTE
Trigger: CTCAGTGCCCTCAGTTATCCAGGGCAAGGGGCCTGG...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGTCAGATGCCAGTGCCTaGTGCCTTGTGTGTCTAACC +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALSDASA*CLVCLT
Trigger: GGTTAGACACACAAGGCACCAGGCACTGGCATCTGA...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTCAGGGAAGAAGCCCCTaGAGCATGTCCCCATGTGTT +
Preference number: 4 (lower is better)
Translates to: PFALCLGVSTARGSLGKAQGRSP*SMSPCV
Trigger: AACACATGGGGACATGCTCCAGGGGCTTCTTCCCTG...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTAGGGGGCCAGTTGGGTaGCAGGCTCCTGGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPRGPVG*QAPGSA
Trigger: CGCTGAACCAGGAGCCTGCCACCCAACTGGCCCCCT...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCAGGGACCCCTGGTATaGAGCAGGGCCTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRQGPLV*SRAFPP
Trigger: GGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTG...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACACTGCCCTGTGAGAATCCAGGTTaGTTGCACTTGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PLASSSRGIDRRPGSTLPCENPG*LHLEPL
Trigger: CAGGGGCTCCAAGTGCAATCAACCTGGATTCTCACA...GGGCAGTGTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR TCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAGTGGCCACAGAGACGTaGGGGATGACAGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGVATET*GMTGGG
Trigger: ACCGCCGCCTGTCATCCCTCACGTCTCTGTGGCCAC...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACACATGTGACGGGACCTaGGGGCAGCCACCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYTCDGT*GQPPGW
Trigger: CCAGCCCGGTGGCTGCCCTCAGGTCCCGTCACATGT...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTCTCCGTTGTGCTTACTaGCCCTCCCCTCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPLRCAY*PSPLDV
Trigger: GACATCCAGAGGGGAGGGTCAGTAAGCACAACGGAG...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCAGCTGTGGGGTGGTGTaGGAGTATTATTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSSCGVV*EYYCSG
Trigger: CCCAGAGCAATAATACTCTCACACCACCCCACAGCT...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTTGCTGGCCCGGTACCTaGCCACTTAGCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALCWPGT*PLSGGE
Trigger: CTCACCACCGCTAAGTGGTCAGGTACCGGGCCAGCA...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTTGGGCAGCTCCTTTTTaGGGCTGGTGGTGCATTATC +
Preference number: 4 (lower is better)
Translates to: PFALCLGVSTARGSLGKAWAAPF*GWWCII
Trigger: GATAATGCACCACCAGCCTCAAAAAGGAGCTGCCCA...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGAGGAGGCCATTCCGATaGGTCCGTGATCATGCGGTG +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLRRPFR*VRDHAV
Trigger: CACCGCATGATCACGGACTCATCGGAATGGCCTCCT...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGCAACGTCATCGCTaGTCCAAGGGTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGKQRHR*SKGWMA
Trigger: AGCCATCCAACCCTTGGATCAGCGATGACGTTGCTT...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGCGGTAGGAACGGTCAGGAGGACTGCATCAGGCCCGTGAGGCGCTTGCCCGCCAGCACACACTGCGAGTaGACTTTTCTAGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: CGRNGQEDCIRPVRRLPASTHCE*TFLGKF
Trigger: GAACTTCCCTAGAAAAGTTCACTCGCAGTGTGTGCT...GGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTTCCTACCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR GCA 90 bp TGGGCATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCAGGTTGGCTGAGTACATaGACCGGGCTCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: WALEPCMRVSASSKGAPPGWLST*TGLCAW
Trigger: CCAGGCACAGAGCCCGGTGCATGTACTCAGCCAACC...TGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAATGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR GCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGGTTGGCTGAGTACATaGACCGGGCTCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSGWLST*TGLCAW
Trigger: CCAGGCACAGAGCCCGGTGCATGTACTCAGCCAACC...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAGGTTGGCTGAGTACATaGACCGGGCTCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGGWLST*TGLCAW
Trigger: CCAGGCACAGAGCCCGGTGCATGTACTCAGCCAACC...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGACCATCGCCCTTCATTaGCCTCACTCTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALTIALH*PHSFSF
Trigger: GAAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGT...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACCACCACGTGGGGGCTaGCAGCCCTGCAATCCAGCC +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQPPRGG*QPCNPA
Trigger: GGCTGGATTGCAGGGCTGGCAGCCCCCACGTGGTGG...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTGTCAGCAACCCCCACTaGTCTTTGATCCCCGGATCC +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPVSNPH*SLIPGS
Trigger: GGATCCGGGGATCAAAGAGCAGTGGGGGTTGCTGAC...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
CDS-3UTR GCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTTCGTCCCCGTCGGTGTaGGCTTCACACCCAGAAACC +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFSSPSV*ASHPET
Trigger: GGTTTCTGGGTGTGAAGCGCACACCGACGGGGACGA...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000553530.5
ENST00000554474.5
CDS-3UTR CCA 90 bp TGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTCCAGCCCTGGCACAGGCCTGTaGACATCCCAAAAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: CMRVSASSKGAPPLASSSPGTGL*TSQKAR
Trigger: ACGAGCCTTTTGGGATGTCCACAGGCCTGTGCCAGG...GCTGGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTCCTGGCACAGGCCTGTaGACATCCCAAAAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPPGTGL*TSQKAR
Trigger: ACGAGCCTTTTGGGATGTCCACAGGCCTGTGCCAGG...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATGGGCATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCACCGGGCTCTGTGCCTaGGACTCTTCAGTCACGCCA +
Preference number: 4 (lower is better)
Translates to: MGIRAMYEGVGLLQRSPSTGLCA*DSSVTP
Trigger: TGGCGTGACTGAAGAGTCCCAGGCACAGAGCCCGGT...GGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAATGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCAGGAATCGTAGAAACTaGTCCCGCCCCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRRNRRN*SRPTWS
Trigger: GGACCAGGTGGGGCGGGACCAGTTTCTACGATTCCT...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTGATGACAGGCGGCGGTaGGGATGTAGTGGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPDDRRR*GCSGCN
Trigger: GTTACAGCCACTACATCCCCACCGCCGCCTGTCATC...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGGGCAGCCACCGGGCTaGCGGGGACCTCTCCGAACG +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSGQPPG*RGPLRT
Trigger: CGTTCGGAGAGGTCCCCGCCAGCCCGGTGGCTGCCC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCCAGGATGCCACCACGTaGGGGCTGCCAGCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPQDATT*GLPALQ
Trigger: TTGCAGGGCTGGCAGCCCCCACGTGGTGGCATCCTG...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCCCTGTGGCCTGGCCTaGTCCCTTCGTAGCATACTC +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFPCGLA*SLRSIL
Trigger: GAGTATGCTACGAAGGGACCAGGCCAGGCCACAGGG...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTAGGAACCATTGCCAGTaGGGGAAACTTGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: PFALCLGVSTARGSLGKARNHCQ*GKLGHG
Trigger: ACCATGCCCAAGTTTCCCCCACTGGCAATGGTTCCT...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAGGGCCACAGTCCACCTaGCTCTGGTCAGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGGPQST*LWSDPL
Trigger: CAGAGGATCTGACCAGAGCCAGGTGGACTGTGGCCC...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCTCAGATGCCAGTGCCTaGTGCCTTGTGTGTCTAACC +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGSDASA*CLVCLT
Trigger: GGTTAGACACACAAGGCACCAGGCACTGGCATCTGA...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTTGGGTGGCAGGCTCCTaGTTCAGCGTCCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFWVAGS*FSVLLV
Trigger: CACCAACAGGACGCTGAACCAGGAGCCTGCCACCCA...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGAAGCCCTCATCGGGGCTaGGGAGAGGGCCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRSPHRG*GEGQVL
Trigger: CAGGACTTGGCCCTCTCCCCAGCCCCGATGAGGGCT...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGACAGGGACCCCTGGTATaGAGCAGGGCCTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGQGPLV*SRAFPP
Trigger: GGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTG...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCACAGGGACCCCTGGTATaGAGCAGGGCCTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSQGPLV*SRAFPP
Trigger: GGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTG...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAGGACTGCATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCCCACTGCTTACTCGCTGTTGGCTaGGCTCTTTGCTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: EDCIRPVRRLPASDFPHCLLAVG*ALCSSL
Trigger: TAGAGATGAGCAAAGAGCCCAGCCAACAGCGAGTAA...GCAGTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR CCA 90 bp AGCCCCTCCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACGCCACACCTTCTTCTTaGCCAGCAGCAAATCCTGGT +
Preference number: 4 (lower is better)
Translates to: SPSIGILQQGNRQEARLHATPSS*PAANPG
Trigger: ACCAGGATTTGCTGCTGGCCAAGAAGAAGGTGTGGC...GTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp CCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTCCAAGGAGCCCCTCCATTaGCATCCTCCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PCMRVSASSKGAPPLASSKEPLH*HPPAGE
Trigger: TTCCCCTGCTGGAGGATGCCAATGGAGGGGCTCCTT...GGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355512.10
3UTR CAA 72 bp GTCATCTACAACAGTGCTTCCTCGAACGCTGGACCCTaGAGACATGTGACGGGACCTGAGGGCAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: VIYNSASSNAGP*RHVTGPEGSHR
Trigger: CCGGTGGCTGCCCTCAGGTCCCGTCACATGTCTCAAGGGTCCAGCGTTCGAGGAAGCACTGTTGTAGATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 72 bp GGGACAGGGCTGTGTGGAAGCAGACATAGACAGGACTaGGAGGTGGTGGGGTGGAAAGATGGGTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: GTGLCGSRHRQD*EVVGWKDGSLG
Trigger: CCCCAGTGACCCATCTTTCCACCCCACCACCTCCAAGTCCTGTCTATGTCTGCTTCCACACAGCCCTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGCCCCTCCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACCAATGTCAGTACCTGTaGCGACACTGGGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: SPSIGILQQGNRQEARLHQCQYL*RHWGFW
Trigger: CCAAAATCCCCAGTGTCGTCACAGGTACTGACATTG...GTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR TCA 90 bp ATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCCCACTGCTGGAAGGAACTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGG +
Preference number: 4 (lower is better)
Translates to: IRPVRRLPASDFPHCWKELSPSQ*PSLLVR
Trigger: CCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAG...TTCCTTCCAGCAGTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR TCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTGTGTTCTCCCCTGAATaGGCTGGGATCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFVFSPE*AGIRAS
Trigger: AGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACAC...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTGTGTTCTCCCCTGAATaGGCTGGGATCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLVFSPE*AGIRAS
Trigger: AGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACAC...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGTGTTCTCCCCTGAATaGGCTGGGATCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSVFSPE*AGIRAS
Trigger: AGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACAC...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACATTTGCCAGAAGGTGTaGCCGTCTCCAGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHICQKV*PSPDSE
Trigger: CTCGCTGTCTGGAGACGGTCACACCTTCTGGCAAAT...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGATTTGCCAGAAGGTGTaGCCGTCTCCAGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLICQKV*PSPDSE
Trigger: CTCGCTGTCTGGAGACGGTCACACCTTCTGGCAAAT...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTTACCAGCCTCTGTGCTaGGCATGTGCAGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFYQPLC*ACAGVQ
Trigger: CTGGACACCTGCACATGCTCAGCACAGAGGCTGGTA...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCTCCGTTGTGCTTACTaGCCCTCCCCTCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFLRCAY*PSPLDV
Trigger: GACATCCAGAGGGGAGGGTCAGTAAGCACAACGGAG...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGTTATTGCTCTGGGTTTaGGTCCATCTGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALLLLWV*VHLKSP
Trigger: GGGAGACTTCAGATGGACTCAAACCCAGAGCAATAA...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCATGCTGGCCCGGTACCTaGCCACTTAGCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSCWPGT*PLSGGE
Trigger: CTCACCACCGCTAAGTGGTCAGGTACCGGGCCAGCA...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGCAGAGGGTCCCATGGTaGGTTATTAGTGATTCGTCT +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALQRVPW*VISDSS
Trigger: AGACGAATCACTAATAACTCACCATGGGACCCTCTG...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCTCCGTGATCATGCGGTaGGTGGGCTTAGAGTATAGA +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGSVIMR*VGLEYR
Trigger: TCTATACTCTAAGCCCACTCACCGCATGATCACGGA...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTATTCCGATGAGTCCGTaGTCATGCGGTGAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPIPMSP*SCGEWA
Trigger: AGCCCACTCACCGCATGATCACGGACTCATCGGAAT...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCATGCACCGGGCTCTGTaGCTGGGACTCTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RAMYEGVGLLQRSPSIGIMHRAL*LGLFSH
Trigger: GTGACTGAAGAGTCCCAGGCACAGAGCCCGGTGCAT...GATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR GCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTATGCACCGGGCTCTGTaGCTGGGACTCTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLMHRAL*LGLFSH
Trigger: GTGACTGAAGAGTCCCAGGCACAGAGCCCGGTGCAT...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTGGTTGGCTGAGTACATaGACCGGGCTCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPGWLST*TGLCAW
Trigger: CCAGGCACAGAGCCCGGTGCATGTACTCAGCCAACC...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGGGTTGGCTGAGTACATaGACCGGGCTCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLGWLST*TGLCAW
Trigger: CCAGGCACAGAGCCCGGTGCATGTACTCAGCCAACC...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAAACGGTCAGGAGGACTaGATCAGGCCCGTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGNGQED*IRPVRR
Trigger: GCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTT...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACCCAGGCCCTGGACCTaGGGTAGGAACGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQPRPWT*GRNGQE
Trigger: CTCCTGACCGTTCCTACCGCAGGTCCAGGGCCTGGG...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCCCCAGGCCCTGGACCTaGGGTAGGAACGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVPRPWT*GRNGQE
Trigger: CTCCTGACCGTTCCTACCGCAGGTCCAGGGCCTGGG...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGTGTAACTATGGGAGGTaGCAGGGAGGTGATGCAAAT +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALCNYGR*QGGDAN
Trigger: ATTTGCATCACCTCCCTGGCACCTCCCATAGTTACA...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCTGTCATCTACAACAGTaGTTCCTCGAACGCTGGACC +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGCHLQQ*FLERWT
Trigger: GGTCCAGCGTTCGAGGAAGCACTGTTGTAGATGACA...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGCTGTGCCTGTCAGGATaGCACCACGTGGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQLCLSG*HHVGAA
Trigger: GGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAG...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACACCGGTTTAGAGGGGTaGTTTGGCTGGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHTGLEG*FGWAFR
Trigger: TCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGT...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCTGCCCGCGATGGCACTaGTGTGAGGGACAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRCPRWH*CEGQKA
Trigger: AGCCTTCTGTCCCTCACAGCAGTGCCATCGCGGGCA...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGTGCCCGCGATGGCACTaGTGTGAGGGACAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLCPRWH*CEGQKA
Trigger: AGCCTTCTGTCCCTCACAGCAGTGCCATCGCGGGCA...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCTCCCTAGCTCCGTTGTaGTTACTGACCCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRSLAPL*LLTLPS
Trigger: AGAGGGGAGGGTCAGTAAGCACAACGGAGCTAGGGA...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGGGGTGGGTGGTCACTTaGTGCAGCTGCCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLGWVVT*CSCPDA
Trigger: AGCATCAGGGCAGCTGCAGCAAGTGACCACCCACCC...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCTTAGTCAGATGCCAGTaGCTGGTGCCTTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGLVRCQ*LVPCVS
Trigger: AGACACACAAGGCACCAGGCACTGGCATCTGACTAA...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTGTCAGCAACCCCCACTaGTCTTTGATCCCCGGATCC +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLVSNPH*SLIPGS
Trigger: GGATCCGGGGATCAAAGAGCAGTGGGGGTTGCTGAC...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
CDS-3UTR CCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTCCTGGCACAGGCCTGTaGACATCCCAAAAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLPGTGL*TSQKAR
Trigger: ACGAGCCTTTTGGGATGTCCACAGGCCTGTGCCAGG...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCCTGGCACAGGCCTGTaGACATCCCAAAAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFPGTGL*TSQKAR
Trigger: ACGAGCCTTTTGGGATGTCCACAGGCCTGTGCCAGG...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTGTGTTCACACAGCCTaGCACAGGCCTGTGGACATC +
Preference number: 4 (lower is better)
Translates to: EPCMRVSASSKGAPPLASCVHTA*HRPVDI
Trigger: GATGTCCACAGGCCTGTGCCAGGCTGTGTGAACACA...GGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCTGTGTTCACACAGCCTaGCACAGGCCTGTGGACATC +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRCVHTA*HRPVDI
Trigger: GATGTCCACAGGCCTGTGCCAGGCTGTGTGAACACA...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCTGGTCCCGCCCCACCTaGTCCTTCAATATCTCATCG +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRWSRPT*SFNISS
Trigger: CGATGAGATATTGAAGGACCAGGTGGGGCGGGACCA...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGCATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCAAGGAATCGTAGAAACTaGTCCCGCCCCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: WALEPCMRVSASSKGAPPRNRRN*SRPTWS
Trigger: GGACCAGGTGGGGCGGGACCAGTTTCTACGATTCCT...TGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAATGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTAGGAATCGTAGAAACTaGTCCCGCCCCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFRNRRN*SRPTWS
Trigger: GGACCAGGTGGGGCGGGACCAGTTTCTACGATTCCT...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACACGCGGGCCCAGGCCCTaGACCTGCGGTAGGAACGGT +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTRGPRP*TCGRNG
Trigger: ACCGTTCCTACCGCAGGTCCAGGGCCTGGGCCCGCG...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGCAGTGACACCCGGGTaGCCACAGAGACGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSAVTPG*PQRREG
Trigger: TCCCTCACGTCTCTGTGGCCACCCGGGTGTCACTGC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCCAGGATGCCACCACGTaGGGGCTGCCAGCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVQDATT*GLPALQ
Trigger: TTGCAGGGCTGGCAGCCCCCACGTGGTGGCATCCTG...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCCCTGTGGCCTGGCCTaGTCCCTTCGTAGCATACTC +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALPCGLA*SLRSIL
Trigger: GAGTATGCTACGAAGGGACCAGGCCAGGCCACAGGG...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTCCCTGTGGCCTGGCCTaGTCCCTTCGTAGCATACTC +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPPCGLA*SLRSIL
Trigger: GAGTATGCTACGAAGGGACCAGGCCAGGCCACAGGG...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACCCTTCAGATAAAGACTaGGAGGAGAGCCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHPSDKD*EESPVA
Trigger: GGCCACAGGGCTCTCCTCCCAGTCTTTATCTGAAGG...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGTTTAGAGGGGTGCTTTaGCTGGGCCTTCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALFRGVL*LGLQIK
Trigger: CTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAA...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGAAAGATGGGTCACTaGGGAGCACCCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSGKMGH*GAPRRP
Trigger: CGGCCTCCTGGGTGCTCCCCAGTGACCCATCTTTCC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGAGGAAAGATGGGTCACTaGGGAGCACCCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRGKMGH*GAPRRP
Trigger: CGGCCTCCTGGGTGCTCCCCAGTGACCCATCTTTCC...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACGACAGGACTTGGAGGTaGTGGGGTGGAAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHDRTWR*WGGKMG
Trigger: ACCCATCTTTCCACCCCACCACCTCCAAGTCCTGTC...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTAGAAGGCTGGTGCCCTaGGGACAGGGCTGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPRRLVP*GQGCVE
Trigger: TTCCACACAGCCCTGTCCCCAGGGCACCAGCCTTCT...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGACAGCCCGGGGATCCTTaGGCAAGGCTGGGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRQPGDP*ARLGAN
Trigger: ATTTGCCCCCAGCCTTGCCCAAGGATCCCCGGGCTG...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCCAGGCCCCTTGCCCTaGATAACTGAGGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRPGPLP*ITEGTE
Trigger: CTCAGTGCCCTCAGTTATCCAGGGCAAGGGGCCTGG...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAGCCCTGTCTGCAGCCTaGCTTAGAAAGCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGALSAA*LRKPLH
Trigger: ATGCAGGGGCTTTCTAAGCCAGGCTGCAGACAGGGC...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAAACCCGACGGGTGGGTaGTCACTTGCTGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGNPTGG*SLAAAA
Trigger: GGCAGCTGCAGCAAGTGACCACCCACCCGTCGGGTT...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCCATCTGGCTGCGGCTaGACGTTTATATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRPSGCG*TFICAS
Trigger: GCTGGCACATATAAACGTCCAGCCGCAGCCAGATGG...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCTTAGTTCAGGCCATCTaGCTGCGGCTGGACGTTTAT +
Preference number: 4 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSLVQAI*LRLDVY
Trigger: ATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTCAGGGAAGAAGCCCCTaGAGCATGTCCCCATGTGTT +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPQGRSP*SMSPCV
Trigger: AACACATGGGGACATGCTCCAGGGGCTTCTTCCCTG...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCTGGGTGGCAGGCTCCTaGTTCAGCGTCCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRWVAGS*FSVLLV
Trigger: CACCAACAGGACGCTGAACCAGGAGCCTGCCACCCA...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAAAGGGGGCCAGTTGGGTaGCAGGCTCCTGGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQRGPVG*QAPGSA
Trigger: CGCTGAACCAGGAGCCTGCCACCCAACTGGCCCCCT...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCAGGGGGCCAGTTGGGTaGCAGGCTCCTGGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCRGPVG*QAPGSA
Trigger: CGCTGAACCAGGAGCCTGCCACCCAACTGGCCCCCT...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGCAGGGACCCCTGGTATaGAGCAGGGCCTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMQGPLV*SRAFPP
Trigger: GGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTG...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCTGGAGAACTCTCCTCTaGGTCAGCAACCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: RAMYEGVGLLQRSPSIGIWRTLL*VSNPHC
Trigger: GCAGTGGGGGTTGCTGACCCAGAGGAGAGTTCTCCA...GATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCTGGAGAACTCTCCTCTaGGTCAGCAACCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSWRTLL*VSNPHC
Trigger: GCAGTGGGGGTTGCTGACCCAGAGGAGAGTTCTCCA...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
CDS-3UTR TCA 90 bp GCCCCTCCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACAGAACCTGAGGTTTTCTaGACTGAATTCGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: APPLASSSRGIDRRPGSTEPEVF*TEFGLQ
Trigger: CTGGAGTCCGAATTCAGTTCAGAAAACCTCAGGTTC...TGTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR TCA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCGAACCTGAGGTTTTCTaGACTGAATTCGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSEPEVF*TEFGLQ
Trigger: CTGGAGTCCGAATTCAGTTCAGAAAACCTCAGGTTC...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCATTTGCCAGAAGGTGTaGCCGTCTCCAGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSICQKV*PSPDSE
Trigger: CTCGCTGTCTGGAGACGGTCACACCTTCTGGCAAAT...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCTTTGGACATTTTACGTaGAAGCAGTGCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGFGHFT*KQCLVL
Trigger: CAGCACCAGGCACTGCTTTCACGTAAAATGTCCAAA...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACGACCTCTCCGAACGCTaGTCTCAAAGAGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHDLSER*SQRGWK
Trigger: TTTCCACCCTCTTTGAGATCAGCGTTCGGAGAGGTC...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAATCCCAATGGCCCCTaGGTTCATGGCCATGTTTAT +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGNPNGP*VHGHVY
Trigger: ATAAACATGGCCATGAACTCAGGGGCCATTGGGATT...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGGGCAAATGGTCATTTTaGCACACACACACAGGGAAT +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALGKWSF*HTHTGN
Trigger: ATTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCC...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGGCGATGGCACTGCTGTaGGGGACAGAAGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQAMALL*GTEGWC
Trigger: GCACCAGCCTTCTGTCCCTCACAGCAGTGCCATCGC...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCGGGTTTGAGTCCATCTaGAGTCTCCCTAGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRGFESI*SLPSSV
Trigger: AACGGAGCTAGGGAGACTTCAGATGGACTCAAACCC...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCTGGGCAGCTCCTTTTTaGGGCTGGTGGTGCATTATC +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRWAAPF*GWWCII
Trigger: GATAATGCACCACCAGCCTCAAAAAGGAGCTGCCCA...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAGACAGCAGCTGGCTCTaGGCCCTCATCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTDSSWL*ALIGAG
Trigger: CCCAGCCCCGATGAGGGCTCAGAGCCAGCTGCTGTC...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTCCAGCAAGCAACGTCATCGCTaGTCCAAGGGTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: CMRVSASSKGAPPLASSSKQRHR*SKGWMA
Trigger: AGCCATCCAACCCTTGGATCAGCGATGACGTTGCTT...GCTGGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR GCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCATGCACCGGGCTCTGTaGCTGGGACTCTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRMHRAL*LGLFSH
Trigger: GTGACTGAAGAGTCCCAGGCACAGAGCCCGGTGCAT...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTGGAGCCAGAAACTCTTaGCAGATTTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: PFALCLGVSTARGSLGKAGARNS*QISSTL
Trigger: GAGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCC...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCCCAGGCCCTGGACCTaGGGTAGGAACGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVEPRPWT*GRNGQE
Trigger: CTCCTGACCGTTCCTACCGCAGGTCCAGGGCCTGGG...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACCCACCACGTGGGGGCTaGCAGCCCTGCAATCCAGCC +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYPPRGG*QPCNPA
Trigger: GGCTGGATTGCAGGGCTGGCAGCCCCCACGTGGTGG...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCCTTCGTAGCATACTCTaGCCCAGCTTCACACACAAA +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGLRSIL*PSFTHK
Trigger: TTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAG...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCATGCCCGCGATGGCACTaGTGTGAGGGACAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSCPRWH*CEGQKA
Trigger: AGCCTTCTGTCCCTCACAGCAGTGCCATCGCGGGCA...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCACCAAGAAGCCAACCCTaGCCTGTCTGCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSPRSQP*PVCSLA
Trigger: AGCCAGGCTGCAGACAGGGCAGGGTTGGCTTCTTGG...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCTCCCTAGCTCCGTTGTaGTTACTGACCCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSSLAPL*LLTLPS
Trigger: AGAGGGGAGGGTCAGTAAGCACAACGGAGCTAGGGA...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAACTGGGGAACATGAGTaGCTTAGCTGTGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGTGEHE*LSCGVV
Trigger: CACCACCCCACAGCTAAGGCACTCATGTTCCCCAGT...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGAGGGTGGGTGGTCACTTaGTGCAGCTGCCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRGWVVT*CSCPDA
Trigger: AGCATCAGGGCAGCTGCAGCAAGTGACCACCCACCC...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCCAGAGAGTTCCTGCTaGTTAGTTCAGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRPESSC*LVQAIW
Trigger: CCAGATGGCCTGAACTAAGCAGCAGGAACTCTCTGG...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCGTCAGCAACCCCCACTaGTCTTTGATCCCCGGATCC +
Preference number: 4 (lower is better)
Translates to: IRAMYEGVGLLQRSPSIGVSNPH*SLIPGS
Trigger: GGATCCGGGGATCAAAGAGCAGTGGGGGTTGCTGAC...GCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR GCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTGTCAGCAACCCCCACTaGTCTTTGATCCCCGGATCC +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPVSNPH*SLIPGS
Trigger: GGATCCGGGGATCAAAGAGCAGTGGGGGTTGCTGAC...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
CDS-3UTR GCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGCCGAGCGCGAGGAGCTaGCCCAACTCGCGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGPSARS*PNSRSR
Trigger: ACGGCTTCGCGAGTTGGGGCAGCTCCTCGCGCTCGG...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS-3UTR GCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCACGGCGGGTCGCATGGTaGCGGGACTCGGGGCGCACA +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISRRVAW*RDSGRT
Trigger: TGTGCGCCCCGAGTCCCGGCACCATGCGACCCGCCG...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS-3UTR CCA 90 bp AGCCCCTCCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACCTCGCAAAGGCCCTCTaGAGTCTTGCTAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SPSIGILQQGNRQEARLHLAKAL*SLAKFS
Trigger: AGAAAACTTAGCAAGACTCCAGAGGGCCTTTGCGAG...GTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAACCGGGCTCTGTGCCTaGGACTCTTCAGTCACGCCA +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGTGLCA*DSSVTP
Trigger: TGGCGTGACTGAAGAGTCCCAGGCACAGAGCCCGGT...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGCATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATGGTCCCGCCCCACCTaGTCCTTCAATATCTCATCG +
Preference number: 4 (lower is better)
Translates to: WALEPCMRVSASSKGAPPWSRPT*SFNISS
Trigger: CGATGAGATATTGAAGGACCAGGTGGGGCGGGACCA...TGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAATGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTTGGTCCCGCCCCACCTaGTCCTTCAATATCTCATCG +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFWSRPT*SFNISS
Trigger: CGATGAGATATTGAAGGACCAGGTGGGGCGGGACCA...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTAGGAATCGTAGAAACTaGTCCCGCCCCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPRNRRN*SRPTWS
Trigger: GGACCAGGTGGGGCGGGACCAGTTTCTACGATTCCT...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTAGGAATCGTAGAAACTaGTCCCGCCCCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALRNRRN*SRPTWS
Trigger: GGACCAGGTGGGGCGGGACCAGTTTCTACGATTCCT...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCTTTCTTCTACCCTCTTaGCCACATCCTGTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGFLLPS*PHPVGV
Trigger: AACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAA...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTCCCAGGTTGATTGCACTTaGAGCCCCTGGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: PCMRVSASSKGAPPLASSQVDCT*SPWSQK
Trigger: TTTCTGGCTCCAGGGGCTCCAAGTGCAATCAACCTG...GGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCAGGTTGATTGCACTTaGAGCCCCTGGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRQVDCT*SPWSQK
Trigger: TTTCTGGCTCCAGGGGCTCCAAGTGCAATCAACCTG...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCGCAGTGACACCCGGGTaGCCACAGAGACGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSAVTPG*PQRREG
Trigger: TCCCTCACGTCTCTGTGGCCACCCGGGTGTCACTGC...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTGGGCAGCCACCGGGCTaGCGGGGACCTCTCCGAACG +
Preference number: 4 (lower is better)
Translates to: KNSQGYNITKTPNARDGTGQPPG*RGPLRT
Trigger: CGTTCGGAGAGGTCCCCGCCAGCCCGGTGGCTGCCC...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCAGGATGCCACCACGTaGGGGCTGCCAGCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVEQDATT*GLPALQ
Trigger: TTGCAGGGCTGGCAGCCCCCACGTGGTGGCATCCTG...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGGGAGGAGAGCCCTGTaGCCTGGCCTGGTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRGRRAL*PGLVPS
Trigger: CGAAGGGACCAGGCCAGGCCACAGGGCTCTCCTCCC...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGGGAGGAGAGCCCTGTaGCCTGGCCTGGTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSGRRAL*PGLVPS
Trigger: CGAAGGGACCAGGCCAGGCCACAGGGCTCTCCTCCC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGACCTTCAGATAAAGACTaGGAGGAGAGCCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGPSDKD*EESPVA
Trigger: GGCCACAGGGCTCTCCTCCCAGTCTTTATCTGAAGG...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGACCTCACAGCCAGGTTaGCAAATGGTCATTTTGACA +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALTSQPG*QMVILT
Trigger: TGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGT...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTCCTTTGGTCACCAGCTaGCGAATTTGGCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPPLVTS*RIWLHE
Trigger: CTCATGCAGCCAAATTCGCCAGCTGGTGACCAAAGG...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACGGAAAGATGGGTCACTaGGGAGCACCCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYGKMGH*GAPRRP
Trigger: CGGCCTCCTGGGTGCTCCCCAGTGACCCATCTTTCC...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGGAAAGATGGGTCACTaGGGAGCACCCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSGKMGH*GAPRRP
Trigger: CGGCCTCCTGGGTGCTCCCCAGTGACCCATCTTTCC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGTGGGGTGGAAAGATaGGTCACTGGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSGGVER*VTGEHP
Trigger: TGGGTGCTCCCCAGTGACCCATCTTTCCACCCCACC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTGACAGGACTTGGAGGTaGTGGGGTGGAAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFDRTWR*WGGKMG
Trigger: ACCCATCTTTCCACCCCACCACCTCCAAGTCCTGTC...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTGACAGGACTTGGAGGTaGTGGGGTGGAAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLDRTWR*WGGKMG
Trigger: ACCCATCTTTCCACCCCACCACCTCCAAGTCCTGTC...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCCAGCCCGGGGATCCTTaGGCAAGGCTGGGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSQPGDP*ARLGAN
Trigger: ATTTGCCCCCAGCCTTGCCCAAGGATCCCCGGGCTG...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATCCAGGCCCCTTGCCCTaGATAACTGAGGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHPGPLP*ITEGTE
Trigger: CTCAGTGCCCTCAGTTATCCAGGGCAAGGGGCCTGG...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCACAGTCCACCTaGCTCTGGTCAGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSGPQST*LWSDPL
Trigger: CAGAGGATCTGACCAGAGCCAGGTGGACTGTGGCCC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCGGGCCACAGTCCACCTaGCTCTGGTCAGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPGPQST*LWSDPL
Trigger: CAGAGGATCTGACCAGAGCCAGGTGGACTGTGGCCC...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGACTGATGCTGTGGTTGTaGGGCTGCCAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGLMLWL*GCQDVA
Trigger: AGCCACATCTTGGCAGCCCCACAACCACAGCATCAG...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTCTGATGCTGTGGTTGTaGGGCTGCCAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLLMLWL*GCQDVA
Trigger: AGCCACATCTTGGCAGCCCCACAACCACAGCATCAG...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCAACCCGACGGGTGGGTaGTCACTTGCTGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSNPTGG*SLAAAA
Trigger: GGCAGCTGCAGCAAGTGACCACCCACCCGTCGGGTT...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAAAACCCGACGGGTGGGTaGTCACTTGCTGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQNPTGG*SLAAAA
Trigger: GGCAGCTGCAGCAAGTGACCACCCACCCGTCGGGTT...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTCCATCTGGCTGCGGCTaGACGTTTATATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLPSGCG*TFICAS
Trigger: GCTGGCACATATAAACGTCCAGCCGCAGCCAGATGG...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCCAGGGAAGAAGCCCCTaGAGCATGTCCCCATGTGTT +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSQGRSP*SMSPCV
Trigger: AACACATGGGGACATGCTCCAGGGGCTTCTTCCCTG...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCTGGGTGGCAGGCTCCTaGTTCAGCGTCCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPWVAGS*FSVLLV
Trigger: CACCAACAGGACGCTGAACCAGGAGCCTGCCACCCA...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGAGGGGGCCAGTTGGGTaGCAGGCTCCTGGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNERGPVG*QAPGSA
Trigger: CGCTGAACCAGGAGCCTGCCACCCAACTGGCCCCCT...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCACCAAGGGGGCCAGTTaGGTGGCAGGCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSTKGAS*VAGSWF
Trigger: GAACCAGGAGCCTGCCACCCAACTGGCCCCCTTGGT...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAAACCAAGGGGGCCAGTTaGGTGGCAGGCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQTKGAS*VAGSWF
Trigger: GAACCAGGAGCCTGCCACCCAACTGGCCCCCTTGGT...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCACCAAGGGGGCCAGTTaGGTGGCAGGCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCTKGAS*VAGSWF
Trigger: GAACCAGGAGCCTGCCACCCAACTGGCCCCCTTGGT...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTGGAAGGCTTTCCTGGTaGTGGTTTTTGAAGCACATG +
Preference number: 4 (lower is better)
Translates to: PFALCLGVSTARGSLGKAGRLSW*WFLKHM
Trigger: CATGTGCTTCAAAAACCACCACCAGGAAAGCCTTCC...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTGAGAGGGCCAAGTCCTaGTCATTTGGACCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALERAKS*SFGPCP
Trigger: GGGACAGGGTCCAAATGACCAGGACTTGGCCCTCTC...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGAGCCCTCATCGGGGCTaGGGAGAGGGCCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNESPHRG*GEGQVL
Trigger: CAGGACTTGGCCCTCTCCCCAGCCCCGATGAGGGCT...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCTGTACCAGCATGTTTaGTTCTGGGGTCCAATCCCC +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLLYQHV*FWGPIP
Trigger: GGGGATTGGACCCCAGAACCAAACATGCTGGTACAG...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGGTTGGATGGCTCAGCTaGTGTTATCAAAGGGTCATA +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALVGWLS*CYQRVI
Trigger: TATGACCCTTTGATAACACCAGCTGAGCCATCCAAC...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTTGTGAGAATCCAGGTTaGTTGCACTTGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFCENPG*LHLEPL
Trigger: CAGGGGCTCCAAGTGCAATCAACCTGGATTCTCACA...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTATCCTGGTAAGCATTTaGCCGGAGGAAGCGGGCATA +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFILVSI*PEEAGI
Trigger: TATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGAT...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTATCCTGGTAAGCATTTaGCCGGAGGAAGCGGGCATA +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLILVSI*PEEAGI
Trigger: TATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGAT...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACCTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGG +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHLSPSQ*PSLLVR
Trigger: CCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAG...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGTGTTCTCCCCTGAATaGGCTGGGATCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSVFSPE*AGIRAS
Trigger: AGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACAC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGCAGAGACGTGAGGGATaGCAGGCGGCGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGQRREG*QAAVGM
Trigger: CATCCCCACCGCCGCCTGTCATCCCTCACGTCTCTG...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGTGGCCACAGAGACGTaGGGGATGACAGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSVATET*GMTGGG
Trigger: ACCGCCGCCTGTCATCCCTCACGTCTCTGTGGCCAC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTGCCTGGTGCTGGCAGTaGCACCCGGGTGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSAWCWQ*HPGGHR
Trigger: TCTGTGGCCACCCGGGTGTCACTGCCAGCACCAGGC...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGGCCTGGTGCTGGCAGTaGCACCCGGGTGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQAWCWQ*HPGGHR
Trigger: TCTGTGGCCACCCGGGTGTCACTGCCAGCACCAGGC...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTAGGCGGGGCAATCCGTaGGGTTGCTTTCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPRRGNP*GCFLAE
Trigger: TTCAGCAAGAAAGCAACCTCACGGATTGCCCCGCCT...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTAGGGTGGAAAGACCTTaGGGCGGGGCAATCCGTGAG +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCRVERP*GGAIRE
Trigger: CTCACGGATTGCCCCGCCTCAAGGTCTTTCCACCCT...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCACACAAAGGAGACCTaGCCCAGCAAGGGTCTCACT +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLHTKET*PSKGLT
Trigger: AGTGAGACCCTTGCTGGGTCAGGTCTCCTTTGTGTG...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCGGCAAATGGTCATTTTaGCACACACACACAGGGAAT +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGGKWSF*HTHTGN
Trigger: ATTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCC...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACTGCGTATCAGGCACCTaGCTCGGTGCTTTACATACA +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHCVSGT*LGALHT
Trigger: TGTATGTAAAGCACCGAGTCAGGTGCCTGATACGCA...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTCTGAGACACTaGGGACTCAACATCTGTCAT +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRLPLRH*GLNICH
Trigger: ATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAG...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCTGCCTCTGAGACACTaGGGACTCAACATCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLLPLRH*GLNICH
Trigger: ATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAG...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGATACCAGCCTCTGTGCTaGGCATGTGCAGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRYQPLC*ACAGVQ
Trigger: CTGGACACCTGCACATGCTCAGCACAGAGGCTGGTA...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCTCAGCGTCCTGTTGGTaGGGTAGTTTGAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRSASCW*GSLKSQ
Trigger: CTGGGATTTCAAACTACCTCACCAACAGGACGCTGA...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGGACAGCAGCTGGCTCTaGGCCCTCATCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQDSSWL*ALIGAG
Trigger: CCCAGCCCCGATGAGGGCTCAGAGCCAGCTGCTGTC...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTATCCTTGAGCCATCCTaGGTGTCTTCACTCACACTG +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPILEPS*VSSLTL
Trigger: CAGTGTGAGTGAAGACACTCAGGATGGCTCAAGGAT...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
CDS-3UTR GCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGTGCCAGTTCCAGCCTTaGTTTATTTTGCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALCQFQP*FILHCP
Trigger: AGGACAATGCAAAATAAAGCAAGGCTGGAACTGGCA...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATATGCACCGGGCTCTGTaGCTGGGACTCTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHMHRAL*LGLFSH
Trigger: GTGACTGAAGAGTCCCAGGCACAGAGCCCGGTGCAT...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCGAAGTTCTACGACCTTaGTCACTTTCTGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGEVLRP*SLSGFF
Trigger: GAAGAAGCCAGAAAGTGAGCAAGGTCGTAGAACTTC...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000622468.4
CDS-3UTR GCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGATGCAAATGCTGGATGTaGTCTCGGTCCACTCATGCC +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGCKCWM*SRSTHA
Trigger: GGCATGAGTGGACCGAGAGCACATCCAGCATTTGCA...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTCCACCACGTGGGGGCTaGCAGCCCTGCAATCCAGCC +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFPPRGG*QPCNPA
Trigger: GGCTGGATTGCAGGGCTGGCAGCCCCCACGTGGTGG...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGCTGTGCCTGTCAGGATaGCACCACGTGGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRLCLSG*HHVGAA
Trigger: GGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAG...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTACCGGTTTAGAGGGGTaGTTTGGCTGGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALTGLEG*FGWAFR
Trigger: TCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGT...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGGCTGGCGAATTTGGCTaGATGAGAAAAGAAATACCA +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALAGEFG*MRKEIP
Trigger: TGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGC...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGTGCCCGCGATGGCACTaGTGTGAGGGACAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQCPRWH*CEGQKA
Trigger: AGCCTTCTGTCCCTCACAGCAGTGCCATCGCGGGCA...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCCAAGAGAGGAACCATTaGCAGTGGGGGAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSQERNH*QWGKLG
Trigger: CCCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTG...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCAAGAGAGGAACCATTaGCAGTGGGGGAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFQERNH*QWGKLG
Trigger: CCCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTG...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAACACCCTTTGCCCTATaGCTAGGGGTCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGTPFAL*LGVSTA
Trigger: GGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGT...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTTGGGAACACCCTTTaGCCTATGCCTAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLLGNTL*PMPRGQ
Trigger: CTGACCCCTAGGCATAGGGCAAAGGGTGTTCCCAAG...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCCTGAGGGCACTGAGGTaGCTGCTGCTTGGGAACACC +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSLRALR*LLLGNT
Trigger: GGTGTTCCCAAGCAGCAGGCACCTCAGTGCCCTCAG...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGAGGCTTAGAAAGCCCCTaGATCATGGGGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRGLESP*IMGRSR
Trigger: CCTGCTCCTCCCCATGATGCAGGGGCTTTCTAAGCC...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGCTTAGAAAGCCCCTaGATCATGGGGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSGLESP*IMGRSR
Trigger: CCTGCTCCTCCCCATGATGCAGGGGCTTTCTAAGCC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCCCAAGAAGCCAACCCTaGCCTGTCTGCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVPRSQP*PVCSLA
Trigger: AGCCAGGCTGCAGACAGGGCAGGGTTGGCTTCTTGG...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTCCAAGAAGCCAACCCTaGCCTGTCTGCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCPRSQP*PVCSLA
Trigger: AGCCAGGCTGCAGACAGGGCAGGGTTGGCTTCTTGG...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGACTGGGGAACATGAGTaGCTTAGCTGTGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLTGEHE*LSCGVV
Trigger: CACCACCCCACAGCTAAGGCACTCATGTTCCCCAGT...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACTGCATGACCAAGTTCTaGGTGGTAGATGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHCMTKF*VVDGPW
Trigger: CCAAGGTCCATCTACCACGCAGAACTTGGTCATGCA...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTGATGCCAGTGCCTGGTaGCTTGTGTGTCTAACCCGA +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALDASAW*LVCLTR
Trigger: TCGGGTTAGACACACAAGGCACCAGGCACTGGCATC...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTCCAGAGAGTTCCTGCTaGTTAGTTCAGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLPESSC*LVQAIW
Trigger: CCAGATGGCCTGAACTAAGCAGCAGGAACTCTCTGG...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAAGCCCAGAGAGTTCCTaGTGCTTAGTTCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGSPESS*CLVQAI
Trigger: GATGGCCTGAACTAAGCAGCAGGAACTCTCTGGGCT...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCTCAGCTAGTCCAAGCTaGAACTCAGAGTCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRSASPS*NSESQE
Trigger: CTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGA...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCCCTCCAATACATTCTaGAGGGCCCAAAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRPSNTF*RAQRKR
Trigger: TCTCTTCCTTTGGGCCCTGCAGAATGTATTGGAGGG...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCACCAGCTCCTGGACCTTaGAGCAACACCTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSPAPGP*SNTSLQ
Trigger: TTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGG...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTCTAAAGAGAACCACATaGACTAAGAGGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: PFALCLGVSTARGSLGKALKRTT*TKRRPF
Trigger: GAATGGCCTCCTCTTAGTGCATGTGGTTCTCTTTAG...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCCTAAAGAGAACCACATaGACTAAGAGGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGLKRTT*TKRRPF
Trigger: GAATGGCCTCCTCTTAGTGCATGTGGTTCTCTTTAG...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTGTTGGCTGGGCTCTTTaGTCATCTCTATGTCCCACA +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPVGWAL*SSLCPT
Trigger: TGTGGGACATAGAGATGAGCAAAGAGCCCAGCCAAC...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGCCCGGTCGGCAAGGGTaGGCGGAGGTCTGTCCGTTC +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKPGRQG*AEVCPF
Trigger: GAACGGACAGACCTCCGCGCACCCTTGCCGACCGGG...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS-3UTR GCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCATTTATATGCAGACCTaGACCCATCCCACACAAGTC +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGIYMQT*THPTQV
Trigger: GACTTGTGTGGGATGGGTGCAGGTCTGCATATAAAT...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553530.5
CDS-3UTR CCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGGTGTATTGCTTCAACTaGGTCCTCAATGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALVYCFN*VLNGKV
Trigger: AACCTTTCCATTGAGGACCCAGTTGAAGCAATACAC...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTTGTGTTCACACAGCCTaGCACAGGCCTGTGGACATC +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALCVHTA*HRPVDI
Trigger: GATGTCCACAGGCCTGTGCCAGGCTGTGTGAACACA...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTGTGTTCACACAGCCTaGCACAGGCCTGTGGACATC +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPCVHTA*HRPVDI
Trigger: GATGTCCACAGGCCTGTGCCAGGCTGTGTGAACACA...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGACCGGGCTCTGTGCCTaGGACTCTTCAGTCACGCCA +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMTGLCA*DSSVTP
Trigger: TGGCGTGACTGAAGAGTCCCAGGCACAGAGCCCGGT...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTACCGGGCTCTGTGCCTaGGACTCTTCAGTCACGCCA +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCTGLCA*DSSVTP
Trigger: TGGCGTGACTGAAGAGTCCCAGGCACAGAGCCCGGT...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCACCGGGCTCTGTGCCTaGGACTCTTCAGTCACGCCA +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVTGLCA*DSSVTP
Trigger: TGGCGTGACTGAAGAGTCCCAGGCACAGAGCCCGGT...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAAACCGGGCTCTGTGCCTaGGACTCTTCAGTCACGCCA +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQTGLCA*DSSVTP
Trigger: TGGCGTGACTGAAGAGTCCCAGGCACAGAGCCCGGT...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCTGGTCCCGCCCCACCTaGTCCTTCAATATCTCATCG +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRWSRPT*SFNISS
Trigger: CGATGAGATATTGAAGGACCAGGTGGGGCGGGACCA...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCACGCGGGCCCAGGCCCTaGACCTGCGGTAGGAACGGT +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISRGPRP*TCGRNG
Trigger: ACCGTTCCTACCGCAGGTCCAGGGCCTGGGCCCGCG...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTTGGACTCTTTCTTTCTaGTCTCCCCATTCACCCACC +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPWTLSF*SPHSPT
Trigger: GGTGGGTGAATGGGGAGACCAGAAAGAAAGAGTCCA...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGCAGGATGCCACCACGTaGGGGCTGCCAGCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRQDATT*GLPALQ
Trigger: TTGCAGGGCTGGCAGCCCCCACGTGGTGGCATCCTG...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGGGGAGGAGAGCCCTGTaGCCTGGCCTGGTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKGRRAL*PGLVPS
Trigger: CGAAGGGACCAGGCCAGGCCACAGGGCTCTCCTCCC...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTCCTTCAGATAAAGACTaGGAGGAGAGCCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPPSDKD*EESPVA
Trigger: GGCCACAGGGCTCTCCTCCCAGTCTTTATCTGAAGG...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCCTTCAGATAAAGACTaGGAGGAGAGCCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRPSDKD*EESPVA
Trigger: GGCCACAGGGCTCTCCTCCCAGTCTTTATCTGAAGG...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCACCTCACAGCCAGGTTaGCAAATGGTCATTTTGACA +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGTSQPG*QMVILT
Trigger: TGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGT...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCGGTGGGGTGGAAAGATaGGTCACTGGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVGGVER*VTGEHP
Trigger: TGGGTGCTCCCCAGTGACCCATCTTTCCACCCCACC...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTGGTGGGGTGGAAAGATaGGTCACTGGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCGGVER*VTGEHP
Trigger: TGGGTGCTCCCCAGTGACCCATCTTTCCACCCCACC...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGGAGGTGCCTGCTGCTTaGGAACACCCTTTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLEVPAA*EHPLPY
Trigger: ATAGGGCAAAGGGTGTTCCCAAGCAGCAGGCACCTC...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGCCAGGCCCCTTGCCCTaGATAACTGAGGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMPGPLP*ITEGTE
Trigger: CTCAGTGCCCTCAGTTATCCAGGGCAAGGGGCCTGG...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATCAGTCCACCTGGCTCTaGTCAGATCCTCTGGGGATC +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHQSTWL*SDPLGI
Trigger: GATCCCCAGAGGATCTGACCAGAGCCAGGTGGACTG...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGGGGCCACAGTCCACCTaGCTCTGGTCAGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQGPQST*LWSDPL
Trigger: CAGAGGATCTGACCAGAGCCAGGTGGACTGTGGCCC...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTGTTCTGCGTGGTAGATaGACCTTGGATAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFVLRGR*TLDRQP
Trigger: AGGCTGCCTATCCAAGGTCCATCTACCACGCAGAAC...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGAACCCGACGGGTGGGTaGTCACTTGCTGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVENPTGG*SLAAAA
Trigger: GGCAGCTGCAGCAAGTGACCACCCACCCGTCGGGTT...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACTTAGTTCAGGCCATCTaGCTGCGGCTGGACGTTTAT +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHLVQAI*LRLDVY
Trigger: ATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGTTAGTTCAGGCCATCTaGCTGCGGCTGGACGTTTAT +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLLVQAI*LRLDVY
Trigger: ATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTGCCCTGCTTTGTTCCTaGGGTATAGCAACACCTTCC +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFALLCS*GIATPS
Trigger: GGAAGGTGTTGCTATACCCCAGGAACAAAGCAGGGC...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCAGGGGGCCAGTTGGGTaGCAGGCTCCTGGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSRGPVG*QAPGSA
Trigger: CGCTGAACCAGGAGCCTGCCACCCAACTGGCCCCCT...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGACCAAGGGGGCCAGTTaGGTGGCAGGCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNETKGAS*VAGSWF
Trigger: GAACCAGGAGCCTGCCACCCAACTGGCCCCCTTGGT...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 72 bp CTGGATGTGCTCTCGGTCCACTCATGCCTCTTGAATTaGCCAGAAGGTGTGACCGTCTCCAGACAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: LDVLSVHSCLLN*PEGVTVSRQRG
Trigger: CCCTCGCTGTCTGGAGACGGTCACACCTTCTGGCAAATTCAAGAGGCATGAGTGGACCGAGAGCACATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACGAACCTGAGGTTTTCTaGACTGAATTCGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHEPEVF*TEFGLQ
Trigger: CTGGAGTCCGAATTCAGTTCAGAAAACCTCAGGTTC...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTGAACCTGAGGTTTTCTaGACTGAATTCGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPEPEVF*TEFGLQ
Trigger: CTGGAGTCCGAATTCAGTTCAGAAAACCTCAGGTTC...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCTGTGAGAATCCAGGTTaGTTGCACTTGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRCENPG*LHLEPL
Trigger: CAGGGGCTCCAAGTGCAATCAACCTGGATTCTCACA...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTGGTAAGCATTTaGCCGGAGGAAGCGGGCATA +
Preference number: 4 (lower is better)
Translates to: IRAMYEGVGLLQRSPSIGILVSI*PEEAGI
Trigger: TATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGAT...GCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR TCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTTTCCCACACTGCGAGTaGACTTTTCTAGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPFPHCE*TFLGKF
Trigger: GAACTTCCCTAGAAAAGTTCACTCGCAGTGTGGGAA...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGACTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGG +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGLSPSQ*PSLLVR
Trigger: CCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAG...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCTGCGTATCAGGCACCTaGCTCGGTGCTTTACATACA +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSCVSGT*LGALHT
Trigger: TGTATGTAAAGCACCGAGTCAGGTGCCTGATACGCA...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTTGCGTATCAGGCACCTaGCTCGGTGCTTTACATACA +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFCVSGT*LGALHT
Trigger: TGTATGTAAAGCACCGAGTCAGGTGCCTGATACGCA...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCGATGGCACTGCTGTaGGGGACAGAAGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSAMALL*GTEGWC
Trigger: GCACCAGCCTTCTGTCCCTCACAGCAGTGCCATCGC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGGCGATGGCACTGCTGTaGGGGACAGAAGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGAMALL*GTEGWC
Trigger: GCACCAGCCTTCTGTCCCTCACAGCAGTGCCATCGC...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCTGCCTCTGAGACACTaGGGACTCAACATCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFLPLRH*GLNICH
Trigger: ATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAG...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCTACCAGCCTCTGTGCTaGGCATGTGCAGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSYQPLC*ACAGVQ
Trigger: CTGGACACCTGCACATGCTCAGCACAGAGGCTGGTA...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAATACCAGCCTCTGTGCTaGGCATGTGCAGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQYQPLC*ACAGVQ
Trigger: CTGGACACCTGCACATGCTCAGCACAGAGGCTGGTA...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTCCGTTGTGCTTACTaGCCCTCCCCTCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQLRCAY*PSPLDV
Trigger: GACATCCAGAGGGGAGGGTCAGTAAGCACAACGGAG...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCCTCCGTTGTGCTTACTaGCCCTCCCCTCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSLRCAY*PSPLDV
Trigger: GACATCCAGAGGGGAGGGTCAGTAAGCACAACGGAG...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGGGGTTTGAGTCCATCTaGAGTCTCCCTAGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLGFESI*SLPSSV
Trigger: AACGGAGCTAGGGAGACTTCAGATGGACTCAAACCC...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAGCAAAGCTTCTGGCTTaGTCTACTGGGGAACATGAG +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGAKLLA*STGEHE
Trigger: CTCATGTTCCCCAGTAGATCAAGCCAGAAGCTTTGC...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGTGCTGGCCCGGTACCTaGCCACTTAGCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRCWPGT*PLSGGE
Trigger: CTCACCACCGCTAAGTGGTCAGGTACCGGGCCAGCA...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTTCAGCGTCCTGTTGGTaGGGTAGTTTGAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFSASCW*GSLKSQ
Trigger: CTGGGATTTCAAACTACCTCACCAACAGGACGCTGA...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTTGGGCAGCTCCTTTTTaGGGCTGGTGGTGCATTATC +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALWAAPF*GWWCII
Trigger: GATAATGCACCACCAGCCTCAAAAAGGAGCTGCCCA...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATTCCGATGAGTCCGTaGTCATGCGGTGAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGIPMSP*SCGEWA
Trigger: AGCCCACTCACCGCATGATCACGGACTCATCGGAAT...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCAGGAGGCCATTCCGATaGGTCCGTGATCATGCGGTG +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSRRPFR*VRDHAV
Trigger: CACCGCATGATCACGGACTCATCGGAATGGCCTCCT...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTAGGAGGCCATTCCGATaGGTCCGTGATCATGCGGTG +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCRRPFR*VRDHAV
Trigger: CACCGCATGATCACGGACTCATCGGAATGGCCTCCT...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTAAGCAACGTCATCGCTaGTCCAAGGGTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPKQRHR*SKGWMA
Trigger: AGCCATCCAACCCTTGGATCAGCGATGACGTTGCTT...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGATCCTTGAGCCATCCTaGGTGTCTTCACTCACACTT +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLILEPS*VSSLTL
Trigger: AAGTGTGAGTGAAGACACTCAGGATGGCTCAAGGAT...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS-3UTR GCA 90 bp CCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTCCGCTCCCCAAGTGTATTaGTTCAACTGGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: PCMRVSASSKGAPPLASSAPQVY*FNWVLN
Trigger: ATTGAGGACCCAGTTGAAGCAATACACTTGGGGAGC...GGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR GCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGGGAGCCAGAAACTCTTaGCAGATTTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLGARNS*QISSTL
Trigger: GAGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCC...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTCCAGCGGAGCCAGAAACTCTTaGCAGATTTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: CMRVSASSKGAPPLASSSGARNS*QISSTL
Trigger: GAGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCC...GCTGGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR GCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGAACGGTCAGGAGGACTaGATCAGGCCCGTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVNGQED*IRPVRR
Trigger: GCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTT...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCAACGGTCAGGAGGACTaGATCAGGCCCGTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSNGQED*IRPVRR
Trigger: GCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTT...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGCCCAGGCCCTGGACCTaGGGTAGGAACGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKPRPWT*GRNGQE
Trigger: CTCCTGACCGTTCCTACCGCAGGTCCAGGGCCTGGG...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTCCCAGGCCCTGGACCTaGGGTAGGAACGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFPRPWT*GRNGQE
Trigger: CTCCTGACCGTTCCTACCGCAGGTCCAGGGCCTGGG...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACTGTAACTATGGGAGGTaGCAGGGAGGTGATGCAAAT +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHCNYGR*QGGDAN
Trigger: ATTTGCATCACCTCCCTGGCACCTCCCATAGTTACA...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACTCTGTGCTGAGCATGTaGAGGTGTCCAGCAAGAATT +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHSVLSM*RCPARI
Trigger: AATTCTTGCTGGACACCTGCACATGCTCAGCACAGA...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCACTTGGGAACACCCTTTaGCCTATGCCTAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSLGNTL*PMPRGQ
Trigger: CTGACCCCTAGGCATAGGGCAAAGGGTGTTCCCAAG...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGGGCTTAGAAAGCCCCTaGATCATGGGGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQGLESP*IMGRSR
Trigger: CCTGCTCCTCCCCATGATGCAGGGGCTTTCTAAGCC...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGGCTTAGAAAGCCCCTaGATCATGGGGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSGLESP*IMGRSR
Trigger: CCTGCTCCTCCCCATGATGCAGGGGCTTTCTAAGCC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCCAAGAAGCCAACCCTaGCCTGTCTGCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNEPRSQP*PVCSLA
Trigger: AGCCAGGCTGCAGACAGGGCAGGGTTGGCTTCTTGG...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAACTGGGGAACATGAGTaGCTTAGCTGTGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGTGEHE*LSCGVV
Trigger: CACCACCCCACAGCTAAGGCACTCATGTTCCCCAGT...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGTCACTTGCTGCAGCTaGCCTGATGCTGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHVTCCS*PDAVVV
Trigger: CACAACCACAGCATCAGGGCAGCTGCAGCAAGTGAC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCGATGCCAGTGCCTGGTaGCTTGTGTGTCTAACCCGA +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPDASAW*LVCLTR
Trigger: TCGGGTTAGACACACAAGGCACCAGGCACTGGCATC...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTTAGTCAGATGCCAGTaGCTGGTGCCTTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLLVRCQ*LVPCVS
Trigger: AGACACACAAGGCACCAGGCACTGGCATCTGACTAA...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCCAGAGAGTTCCTGCTaGTTAGTTCAGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALPESSC*LVQAIW
Trigger: CCAGATGGCCTGAACTAAGCAGCAGGAACTCTCTGG...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTAGCCCAGAGAGTTCCTaGTGCTTAGTTCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALSPESS*CLVQAI
Trigger: GATGGCCTGAACTAAGCAGCAGGAACTCTCTGGGCT...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCCCTCCAATACATTCTaGAGGGCCCAAAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFPSNTF*RAQRKR
Trigger: TCTCTTCCTTTGGGCCCTGCAGAATGTATTGGAGGG...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCCAGCTCCTGGACCTTaGAGCAACACCTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCPAPGP*SNTSLQ
Trigger: TTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCCCAGCTCCTGGACCTTaGAGCAACACCTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCPAPGP*SNTSLQ
Trigger: TTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGG...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGCTGGCATCTGCTGTTaGTATGGTTACACGAGCACA +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSAGICC*YGYTST
Trigger: TGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGC...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTGTTGGCTGGGCTCTTTaGTCATCTCTATGTCCCACA +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLVGWAL*SSLCPT
Trigger: TGTGGGACATAGAGATGAGCAAAGAGCCCAGCCAAC...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGTGTATCTGGCCCCCTCTGCTaGGGTGCTGCTGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: YKVGLSVVLDAPSPFPSVSGPLC*GAAAPR
Trigger: CCGGGGAGCAGCAGCACCGCAGCAGAGGGGGCCAGA...TACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp GCCCCTCCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACAGTGTATTGCTTCAACTaGGTCCTCAATGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: APPLASSSRGIDRRPGSTVYCFN*VLNGKV
Trigger: AACCTTTCCATTGAGGACCCAGTTGAAGCAATACAC...TGTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTCTCGCAAAGGCCCTCTaGAGTCTTGCTAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPLAKAL*SLAKFS
Trigger: AGAAAACTTAGCAAGACTCCAGAGGGCCTTTGCGAG...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGCATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCAGTTTTCCTGATTGGTTaGCTGAGTACATGCACCGGG +
Preference number: 4 (lower is better)
Translates to: WALEPCMRVSASSKGAPPVFLIG*LSTCTG
Trigger: CCCGGTGCATGTACTCAGCCAACCAATCAGGAAAAC...TGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAATGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAGTTTTCCTGATTGGTTaGCTGAGTACATGCACCGGG +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGVFLIG*LSTCTG
Trigger: CCCGGTGCATGTACTCAGCCAACCAATCAGGAAAAC...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGATGGTCCCGCCCCACCTaGTCCTTCAATATCTCATCG +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGWSRPT*SFNISS
Trigger: CGATGAGATATTGAAGGACCAGGTGGGGCGGGACCA...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCTGGTCCCGCCCCACCTaGTCCTTCAATATCTCATCG +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPWSRPT*SFNISS
Trigger: CGATGAGATATTGAAGGACCAGGTGGGGCGGGACCA...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGTTTCTTCTACCCTCTTaGCCACATCCTGTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLFLLPS*PHPVGV
Trigger: AACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAA...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGATGACAGGCGGCGGTaGGGATGTAGTGGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSDDRRR*GCSGCN
Trigger: GTTACAGCCACTACATCCCCACCGCCGCCTGTCATC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACGCAGTGACACCCGGGTaGCCACAGAGACGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYAVTPG*PQRREG
Trigger: TCCCTCACGTCTCTGTGGCCACCCGGGTGTCACTGC...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTGCTTCCTCGAACGCTaGACCCTTGAGACATGTGAC +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPCFLER*TLETCD
Trigger: GTCACATGTCTCAAGGGTCCAGCGTTCGAGGAAGCA...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGGGGAGGAGAGCCCTGTaGCCTGGCCTGGTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLGRRAL*PGLVPS
Trigger: CGAAGGGACCAGGCCAGGCCACAGGGCTCTCCTCCC...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGACCTTCAGATAAAGACTaGGAGGAGAGCCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRPSDKD*EESPVA
Trigger: GGCCACAGGGCTCTCCTCCCAGTCTTTATCTGAAGG...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGGGTAGTCATAGCAAGTaGGGGAGTGAATGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLGSHSK*GSECLD
Trigger: ATCCAGACATTCACTCCCCCACTTGCTATGACTACC...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCCTTTGGTCACCAGCTaGCGAATTTGGCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLPLVTS*RIWLHE
Trigger: CTCATGCAGCCAAATTCGCCAGCTGGTGACCAAAGG...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTAAGCATCTGAGCCTTTaGTCACCAGCTGGCGAATTT +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPKHLSL*SPAGEF
Trigger: AAATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTT...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGGATTTACTCATCAAGTaGTTAGTGCCTCCAAAGTAC +
Preference number: 4 (lower is better)
Translates to: QGSHCACQDATTWGLPALDLLIK*LVPPKY
Trigger: GTACTTTGGAGGCACTAACCACTTGATGAGTAAATC...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGCAGCCCGGGGATCCTTaGGCAAGGCTGGGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVQPGDP*ARLGAN
Trigger: ATTTGCCCCCAGCCTTGCCCAAGGATCCCCGGGCTG...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACACAGCCCGGGGATCCTTaGGCAAGGCTGGGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTQPGDP*ARLGAN
Trigger: ATTTGCCCCCAGCCTTGCCCAAGGATCCCCGGGCTG...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGAGGTGCCTGCTGCTTaGGAACACCCTTTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHEVPAA*EHPLPY
Trigger: ATAGGGCAAAGGGTGTTCCCAAGCAGCAGGCACCTC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGGCCCTGTCTGCAGCCTaGCTTAGAAAGCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQALSAA*LRKPLH
Trigger: ATGCAGGGGCTTTCTAAGCCAGGCTGCAGACAGGGC...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTGCCCTGTCTGCAGCCTaGCTTAGAAAGCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCALSAA*LRKPLH
Trigger: ATGCAGGGGCTTTCTAAGCCAGGCTGCAGACAGGGC...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGCCCTGTCTGCAGCCTaGCTTAGAAAGCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSALSAA*LRKPLH
Trigger: ATGCAGGGGCTTTCTAAGCCAGGCTGCAGACAGGGC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGCAGTCCACCTGGCTCTaGTCAGATCCTCTGGGGATC +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMQSTWL*SDPLGI
Trigger: GATCCCCAGAGGATCTGACCAGAGCCAGGTGGACTG...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGTGTAGACCAGGCCAATaGGGGACGGGCCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNECRPGQ*GTGQDQ
Trigger: CTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACA...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCTGCCAAGATGTGGCTaGAGAGCACTTTTCCTCATA +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLLPRCG*RALFLI
Trigger: TATGAGGAAAAGTGCTCTCCAGCCACATCTTGGCAG...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCGGGGCTGCCAAGATGTaGCTGGAGAGCACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPGAAKM*LESTFP
Trigger: AGGAAAAGTGCTCTCCAGCCACATCTTGGCAGCCCC...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGACTGATGCTGTGGTTGTaGGGCTGCCAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRLMLWL*GCQDVA
Trigger: AGCCACATCTTGGCAGCCCCACAACCACAGCATCAG...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATCTGATGCTGTGGTTGTaGGGCTGCCAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHLMLWL*GCQDVA
Trigger: AGCCACATCTTGGCAGCCCCACAACCACAGCATCAG...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGGCTGCCCTGATGCTGTaGTTGTGGGGCTGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMAALML*LWGCQD
Trigger: ATCTTGGCAGCCCCACAACCACAGCATCAGGGCAGC...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGACCATCTGGCTGCGGCTaGACGTTTATATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGPSGCG*TFICAS
Trigger: GCTGGCACATATAAACGTCCAGCCGCAGCCAGATGG...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTGACTGCACTGGCAGTTaGGCCCTGCTTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCDCTGS*ALLCSW
Trigger: CCAGGAACAAAGCAGGGCCCAACTGCCAGTGCAGTC...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCGACTGCACTGGCAGTTaGGCCCTGCTTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCDCTGS*ALLCSW
Trigger: CCAGGAACAAAGCAGGGCCCAACTGCCAGTGCAGTC...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAAGACTGCACTGGCAGTTaGGCCCTGCTTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQDCTGS*ALLCSW
Trigger: CCAGGAACAAAGCAGGGCCCAACTGCCAGTGCAGTC...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTAGGCTTTCCTGGTGGTaGTTTTTGAAGCACATGTAT +
Preference number: 4 (lower is better)
Translates to: PFALCLGVSTARGSLGKARLSWW*FLKHMY
Trigger: ATACATGTGCTTCAAAAACCACCACCAGGAAAGCCT...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCATCTGCTGTTGCTATaGTTACACGAGCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFHLLLL*LHEHRP
Trigger: AGGCCTGTGCTCGTGTAACCATAGCAACAGCAGATG...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCAAGTCCTGGTCATTTaGACCCTGTCCCCGTATAGA +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFQVLVI*TLSPYR
Trigger: TCTATACGGGGACAGGGTCCAAATGACCAGGACTTG...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCGAGAGGGCCAAGTCCTaGTCATTTGGACCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSERAKS*SFGPCP
Trigger: GGGACAGGGTCCAAATGACCAGGACTTGGCCCTCTC...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGGAGAGGGCCAAGTCCTaGTCATTTGGACCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQERAKS*SFGPCP
Trigger: GGGACAGGGTCCAAATGACCAGGACTTGGCCCTCTC...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGAGCCCTCATCGGGGCTaGGGAGAGGGCCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQSPHRG*GEGQVL
Trigger: CAGGACTTGGCCCTCTCCCCAGCCCCGATGAGGGCT...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCTGGAGAACTCTCCTCTaGGTCAGCAACCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVWRTLL*VSNPHC
Trigger: GCAGTGGGGGTTGCTGACCCAGAGGAGAGTTCTCCA...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000553530.5
CDS-3UTR CCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACGATCCAAGGGTTGGATaGCTCAGCTGGTGTTATCAA +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHDPRVG*LSWCYQ
Trigger: TTGATAACACCAGCTGAGCCATCCAACCCTTGGATC...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCTTTTTACTCGCTGTTaGCTGGGCTCTTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLLFTRC*LGSLLI
Trigger: GATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAG...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACACTTTCCGAGTTTCCGTaGTGGCGAGCGCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTLSEFP*WRAQGL
Trigger: GAGCCCCTGCGCTCGCCACCACGGAAACTCGGAAAG...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS-3UTR TCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATTGTGAGAATCCAGGTTaGTTGCACTTGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHCENPG*LHLEPL
Trigger: CAGGGGCTCCAAGTGCAATCAACCTGGATTCTCACA...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCATCCTGGTAAGCATTTaGCCGGAGGAAGCGGGCATA +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPILVSI*PEEAGI
Trigger: TATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGAT...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGATTTGCCAGAAGGTGTaGCCGTCTCCAGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMICQKV*PSPDSE
Trigger: CTCGCTGTCTGGAGACGGTCACACCTTCTGGCAAAT...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGAGGCGGGGCAATCCGTaGGGTTGCTTTCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQRRGNP*GCFLAE
Trigger: TTCAGCAAGAAAGCAACCTCACGGATTGCCCCGCCT...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCGACCTCTCCGAACGCTaGTCTCAAAGAGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPDLSER*SQRGWK
Trigger: TTTCCACCCTCTTTGAGATCAGCGTTCGGAGAGGTC...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGTACCAGCCTCTGTGCTaGGCATGTGCAGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNEYQPLC*ACAGVQ
Trigger: CTGGACACCTGCACATGCTCAGCACAGAGGCTGGTA...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGATTATTGCTCTGGGTTTaGGTCCATCTGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGLLLWV*VHLKSP
Trigger: GGGAGACTTCAGATGGACTCAAACCCAGAGCAATAA...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGAAGCTGTGGGGTGGTGTaGGAGTATTATTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRSCGVV*EYYCSG
Trigger: CCCAGAGCAATAATACTCTCACACCACCCCACAGCT...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGATGCTGGCCCGGTACCTaGCCACTTAGCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRCWPGT*PLSGGE
Trigger: CTCACCACCGCTAAGTGGTCAGGTACCGGGCCAGCA...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGACCTGGTGGTGGTTTTTaGAGCACATGTATATGGAGC +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGPGGGF*STCIWS
Trigger: GCTCCATATACATGTGCTTCAAAAACCACCACCAGG...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGATTCCGATGAGTCCGTaGTCATGCGGTGAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMIPMSP*SCGEWA
Trigger: AGCCCACTCACCGCATGATCACGGACTCATCGGAAT...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGAAAGCAACGTCATCGCTaGTCCAAGGGTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRKQRHR*SKGWMA
Trigger: AGCCATCCAACCCTTGGATCAGCGATGACGTTGCTT...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGGTTGGCTGAGTACATaGACCGGGCTCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVGWLST*TGLCAW
Trigger: CCAGGCACAGAGCCCGGTGCATGTACTCAGCCAACC...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGGTTGGCTGAGTACATaGACCGGGCTCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSGWLST*TGLCAW
Trigger: CCAGGCACAGAGCCCGGTGCATGTACTCAGCCAACC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGGAAGTTCTACGACCTTaGTCACTTTCTGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLEVLRP*SLSGFF
Trigger: GAAGAAGCCAGAAAGTGAGCAAGGTCGTAGAACTTC...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTGAAGTTCTACGACCTTaGTCACTTTCTGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPEVLRP*SLSGFF
Trigger: GAAGAAGCCAGAAAGTGAGCAAGGTCGTAGAACTTC...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTAACGGTCAGGAGGACTaGATCAGGCCCGTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSNGQED*IRPVRR
Trigger: GCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTT...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTACCATCGCCCTTCATTaGCCTCACTCTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALTIALH*PHSFSF
Trigger: GAAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGT...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATTGCAAATGCTGGATGTaGTCTCGGTCCACTCATGCC +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHCKCWM*SRSTHA
Trigger: GGCATGAGTGGACCGAGAGCACATCCAGCATTTGCA...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTCTTGGGAACACCCTTTaGCCTATGCCTAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCLGNTL*PMPRGQ
Trigger: CTGACCCCTAGGCATAGGGCAAAGGGTGTTCCCAAG...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCCTTGGGAACACCCTTTaGCCTATGCCTAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSLGNTL*PMPRGQ
Trigger: CTGACCCCTAGGCATAGGGCAAAGGGTGTTCCCAAG...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGCTGAGGGCACTGAGGTaGCTGCTGCTTGGGAACACC +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVLRALR*LLLGNT
Trigger: GGTGTTCCCAAGCAGCAGGCACCTCAGTGCCCTCAG...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCCTGAGGGCACTGAGGTaGCTGCTGCTTGGGAACACC +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSLRALR*LLLGNT
Trigger: GGTGTTCCCAAGCAGCAGGCACCTCAGTGCCCTCAG...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACACCAAGAAGCCAACCCTaGCCTGTCTGCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTPRSQP*PVCSLA
Trigger: AGCCAGGCTGCAGACAGGGCAGGGTTGGCTTCTTGG...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAAACTGGGGAACATGAGTaGCTTAGCTGTGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQTGEHE*LSCGVV
Trigger: CACCACCCCACAGCTAAGGCACTCATGTTCCCCAGT...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGACTGGGGAACATGAGTaGCTTAGCTGTGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQTGEHE*LSCGVV
Trigger: CACCACCCCACAGCTAAGGCACTCATGTTCCCCAGT...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACGTCACTTGCTGCAGCTaGCCTGATGCTGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYVTCCS*PDAVVV
Trigger: CACAACCACAGCATCAGGGCAGCTGCAGCAAGTGAC...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGGTTATTTTAGTCAGATaGCAGTGCCTGGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLVILVR*QCLVPC
Trigger: ACAAGGCACCAGGCACTGGCATCTGACTAAAATAAC...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCTCAGCTAGTCCAAGCTaGAACTCAGAGTCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRSASPS*NSESQE
Trigger: CTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGA...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGGTCAGCAACCCCCACTaGTCTTTGATCCCCGGATCC +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNEVSNPH*SLIPGS
Trigger: GGATCCGGGGATCAAAGAGCAGTGGGGGTTGCTGAC...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
CDS-3UTR GCA 90 bp ATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCGTTGGCTGGGCTCTTTaGTCATCTCTATGTCCCACA +
Preference number: 4 (lower is better)
Translates to: IRAMYEGVGLLQRSPSIGVGWAL*SSLCPT
Trigger: TGTGGGACATAGAGATGAGCAAAGAGCCCAGCCAAC...GCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR GCA 90 bp GGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGTGTAATGTGCCTCTGCTGCGGTGCTaGTGCTCCCCGGACAGGACT +
Preference number: 4 (lower is better)
Translates to: GWVKCCLGCSISISQCNVPLLRC*CSPDRT
Trigger: AGTCCTGTCCGGGGAGCAGCAGCACCGCAGCAGAGG...CACATTACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGGTCCACACGCCAGCTTaGCTAACCACTTATGTAAGC +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLVHTPA*LTTYVS
Trigger: GCTTACATAAGTGGTTAGGCAAGCTGGCGTGTGGAC...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553530.5
CDS-3UTR GCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTATTTATATGCAGACCTaGACCCATCCCACACAAGTC +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPIYMQT*THPTQV
Trigger: GACTTGTGTGGGATGGGTGCAGGTCTGCATATAAAT...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553530.5
ENST00000554474.5
CDS-3UTR GCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACTCGTCCCCGTCGGTGTaGGCTTCACACCCAGAAACC +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYSSPSV*ASHPET
Trigger: GGTTTCTGGGTGTGAAGCGCACACCGACGGGGACGA...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553530.5
ENST00000554474.5
CDS-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACTGTGTTCACACAGCCTaGCACAGGCCTGTGGACATC +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYCVHTA*HRPVDI
Trigger: GATGTCCACAGGCCTGTGCCAGGCTGTGTGAACACA...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAATGTGTTCACACAGCCTaGCACAGGCCTGTGGACATC +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQCVHTA*HRPVDI
Trigger: GATGTCCACAGGCCTGTGCCAGGCTGTGTGAACACA...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCACCGGGCTCTGTGCCTaGGACTCTTCAGTCACGCCA +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSTGLCA*DSSVTP
Trigger: TGGCGTGACTGAAGAGTCCCAGGCACAGAGCCCGGT...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTGTTTTCCTGATTGGTTaGCTGAGTACATGCACCGGG +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPVFLIG*LSTCTG
Trigger: CCCGGTGCATGTACTCAGCCAACCAATCAGGAAAAC...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCTGTTTCTTAAGATCTTaGACAGCCAGCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRCFLRS*TASQNL
Trigger: CAGGTTCTGGCTGGCTGTCCAAGATCTTAAGAAACA...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGACCAGCCCAGGCTCTGTaGACTCTTTCTTTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRPAQAL*TLSFWS
Trigger: AGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGG...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGGGGCCTCTTAGCGAGTaGAGTGTTGGAATACAACTG +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLGPLSE*SVGIQL
Trigger: CAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCC...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTGCAGTGACACCCGGGTaGCCACAGAGACGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSAVTPG*PQRREG
Trigger: TCCCTCACGTCTCTGTGGCCACCCGGGTGTCACTGC...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGATGCTTCCTCGAACGCTaGACCCTTGAGACATGTGAC +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGCFLER*TLETCD
Trigger: GTCACATGTCTCAAGGGTCCAGCGTTCGAGGAAGCA...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGCCCTGTGGCCTGGCCTaGTCCCTTCGTAGCATACTC +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRPCGLA*SLRSIL
Trigger: GAGTATGCTACGAAGGGACCAGGCCAGGCCACAGGG...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGCCCTGTGGCCTGGCCTaGTCCCTTCGTAGCATACTC +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGPCGLA*SLRSIL
Trigger: GAGTATGCTACGAAGGGACCAGGCCAGGCCACAGGG...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCACCTTTGGTCACCAGCTaGCGAATTTGGCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSPLVTS*RIWLHE
Trigger: CTCATGCAGCCAAATTCGCCAGCTGGTGACCAAAGG...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGGTGGGGTGGAAAGATaGGTCACTGGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAGGVER*VTGEHP
Trigger: TGGGTGCTCCCCAGTGACCCATCTTTCCACCCCACC...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCGACAGGACTTGGAGGTaGTGGGGTGGAAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSDRTWR*WGGKMG
Trigger: ACCCATCTTTCCACCCCACCACCTCCAAGTCCTGTC...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGAGAAGGCTGGTGCCCTaGGGACAGGGCTGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRRRLVP*GQGCVE
Trigger: TTCCACACAGCCCTGTCCCCAGGGCACCAGCCTTCT...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGAGAAGGCTGGTGCCCTaGGGACAGGGCTGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGRRLVP*GQGCVE
Trigger: TTCCACACAGCCCTGTCCCCAGGGCACCAGCCTTCT...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGAAGGAACCATTGCCAGTaGGGGAAACTTGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRRNHCQ*GKLGHG
Trigger: ACCATGCCCAAGTTTCCCCCACTGGCAATGGTTCCT...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGGAGGTGCCTGCTGCTTaGGAACACCCTTTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMEVPAA*EHPLPY
Trigger: ATAGGGCAAAGGGTGTTCCCAAGCAGCAGGCACCTC...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGGAGGTGCCTGCTGCTTaGGAACACCCTTTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQEVPAA*EHPLPY
Trigger: ATAGGGCAAAGGGTGTTCCCAAGCAGCAGGCACCTC...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAAGAGGTGCCTGCTGCTTaGGAACACCCTTTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQEVPAA*EHPLPY
Trigger: ATAGGGCAAAGGGTGTTCCCAAGCAGCAGGCACCTC...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCCCAGGCCCCTTGCCCTaGATAACTGAGGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSPGPLP*ITEGTE
Trigger: CTCAGTGCCCTCAGTTATCCAGGGCAAGGGGCCTGG...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCAGTCCACCTGGCTCTaGTCAGATCCTCTGGGGATC +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNEQSTWL*SDPLGI
Trigger: GATCCCCAGAGGATCTGACCAGAGCCAGGTGGACTG...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGTGGTAGATGGACCTTaGATAGGCAGCCTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSVVDGP*IGSLVP
Trigger: TGGAACGAGGCTGCCTATCCAAGGTCCATCTACCAC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGTGTAGACCAGGCCAATaGGGGACGGGCCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRCRPGQ*GTGQDQ
Trigger: CTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACA...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTGGGGCTGCCAAGATGTaGCTGGAGAGCACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCGAAKM*LESTFP
Trigger: AGGAAAAGTGCTCTCCAGCCACATCTTGGCAGCCCC...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGGGGCTGCCAAGATGTaGCTGGAGAGCACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSGAAKM*LESTFP
Trigger: AGGAAAAGTGCTCTCCAGCCACATCTTGGCAGCCCC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGCCCTGCTTTGTTCCTaGGGTATAGCAACACCTTCC +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSALLCS*GIATPS
Trigger: GGAAGGTGTTGCTATACCCCAGGAACAAAGCAGGGC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGTGGGTGGCAGGCTCCTaGTTCAGCGTCCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRWVAGS*FSVLLV
Trigger: CACCAACAGGACGCTGAACCAGGAGCCTGCCACCCA...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGTACTTTGCTACTTTATaGCCCCTGGGTCTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLYFATL*PLGLAQ
Trigger: CTGGGCTAGACCCAGGGGCCATAAAGTAGCAAAGTA...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCAAGTCCTGGTCATTTaGACCCTGTCCCCGTATAGA +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRQVLVI*TLSPYR
Trigger: TCTATACGGGGACAGGGTCCAAATGACCAGGACTTG...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCAAGCCCTCATCGGGGCTaGGGAGAGGGCCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISSPHRG*GEGQVL
Trigger: CAGGACTTGGCCCTCTCCCCAGCCCCGATGAGGGCT...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGACTGTACCAGCATGTTTaGTTCTGGGGTCCAATCCCC +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGLYQHV*FWGPIP
Trigger: GGGGATTGGACCCCAGAACCAAACATGCTGGTACAG...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCGTAAACGATCATGTTTaGAGAACTCTCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: EPCMRVSASSKGAPPLASVNDHV*RTLLWV
Trigger: GACCCAGAGGAGAGTTCTCCAAACATGATCGTTTAC...GGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp GAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCGTTGGATGGCTCAGCTaGTGTTATCAAAGGGTCATA +
Preference number: 4 (lower is better)
Translates to: EPCMRVSASSKGAPPLASVGWLS*CYQRVI
Trigger: TATGACCCTTTGATAACACCAGCTGAGCCATCCAAC...GGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCTTACTCGCTGTTGGCTaGGCTCTTTGCTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSLLAVG*ALCSSL
Trigger: TAGAGATGAGCAAAGAGCCCAGCCAACAGCGAGTAA...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCACAATGTCAGTACCTGTaGCGACACTGGGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSQCQYL*RHWGFW
Trigger: CCAAAATCCCCAGTGTCGTCACAGGTACTGACATTG...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCGAACCTGAGGTTTTCTaGACTGAATTCGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERREPEVF*TEFGLQ
Trigger: CTGGAGTCCGAATTCAGTTCAGAAAACCTCAGGTTC...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCTGTGAGAATCCAGGTTaGTTGCACTTGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCCENPG*LHLEPL
Trigger: CAGGGGCTCCAAGTGCAATCAACCTGGATTCTCACA...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCATCCTGGTAAGCATTTaGCCGGAGGAAGCGGGCATA +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVILVSI*PEEAGI
Trigger: TATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGAT...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTATCCTGGTAAGCATTTaGCCGGAGGAAGCGGGCATA +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCILVSI*PEEAGI
Trigger: TATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGAT...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGTGTTCTCCCCTGAATaGGCTGGGATCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSVFSPE*AGIRAS
Trigger: AGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACAC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTTTGGACATTTTACGTaGAAGCAGTGCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPFGHFT*KQCLVL
Trigger: CAGCACCAGGCACTGCTTTCACGTAAAATGTCCAAA...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGCGAATTTGGCTGCATaGGAAAAGAAATACCAGCGA +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSANLAA*EKKYQR
Trigger: TCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGC...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTGGGGCTTTATGCCATTaGTTTACTCATCAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPGALCH*FTHQVV
Trigger: AACCACTTGATGAGTAAATCAATGGCATAAAGCCCC...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCGGGTTTGAGTCCATCTaGAGTCTCCCTAGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVGFESI*SLPSSV
Trigger: AACGGAGCTAGGGAGACTTCAGATGGACTCAAACCC...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCACATCTAATCTAGTCTaGATTTTTGGCTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGTSNLV*IFGCVD
Trigger: GTCTACACAGCCAAAAATTCAGACTAGATTAGATGT...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGATCAGCGTCCTGTTGGTaGGGTAGTTTGAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGSASCW*GSLKSQ
Trigger: CTGGGATTTCAAACTACCTCACCAACAGGACGCTGA...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGATCCGTGATCATGCGGTaGGTGGGCTTAGAGTATAGA +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGSVIMR*VGLEYR
Trigger: TCTATACTCTAAGCCCACTCACCGCATGATCACGGA...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAGGAGGCCATTCCGATaGGTCCGTGATCATGCGGTG +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYRRPFR*VRDHAV
Trigger: CACCGCATGATCACGGACTCATCGGAATGGCCTCCT...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCAGGAGGCCATTCCGATaGGTCCGTGATCATGCGGTG +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSRRPFR*VRDHAV
Trigger: CACCGCATGATCACGGACTCATCGGAATGGCCTCCT...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCAAGCAACGTCATCGCTaGTCCAAGGGTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSKQRHR*SKGWMA
Trigger: AGCCATCCAACCCTTGGATCAGCGATGACGTTGCTT...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GCCCCTCCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACACCTGTCTTGTCATCTTaGATCTTTGTAATGATGTCT +
Preference number: 4 (lower is better)
Translates to: APPLASSSRGIDRRPGSTPVLSS*IFVMMS
Trigger: AGACATCATTACAAAGATGCAAGATGACAAGACAGG...TGTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR GCA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCCCTGTCTTGTCATCTTaGATCTTTGTAATGATGTCT +
Preference number: 4 (lower is better)
Translates to: GTPFALCLGVSTARGSLGPVLSS*IFVMMS
Trigger: AGACATCATTACAAAGATGCAAGATGACAAGACAGG...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACTTCTTCATAAGCCACTaGACAATGTCAGTACCTGTG +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHFFISH*TMSVPV
Trigger: CACAGGTACTGACATTGTGCAGTGGCTTATGAAGAA...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTCCAGCTTCTTCATAAGCCACTaGACAATGTCAGTACCTGTG +
Preference number: 4 (lower is better)
Translates to: CMRVSASSKGAPPLASSSFFISH*TMSVPV
Trigger: CACAGGTACTGACATTGTGCAGTGGCTTATGAAGAA...GCTGGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR GCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTTTCTTCATAAGCCACTaGACAATGTCAGTACCTGTG +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPFFISH*TMSVPV
Trigger: CACAGGTACTGACATTGTGCAGTGGCTTATGAAGAA...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTCCAGCTGCCAGTTCCAGCCTTaGTTTATTTTGCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: CMRVSASSKGAPPLASSSCQFQP*FILHCP
Trigger: AGGACAATGCAAAATAAAGCAAGGCTGGAACTGGCA...GCTGGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR GCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGTGCCAGTTCCAGCCTTaGTTTATTTTGCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLCQFQP*FILHCP
Trigger: AGGACAATGCAAAATAAAGCAAGGCTGGAACTGGCA...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCTGCCAGTTCCAGCCTTaGTTTATTTTGCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRCQFQP*FILHCP
Trigger: AGGACAATGCAAAATAAAGCAAGGCTGGAACTGGCA...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGTTCTGCTTCATAATCTaGCAGTTCCAGCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLFCFII*QFQPCF
Trigger: AAAGCAAGGCTGGAACTGGCAGATTATGAAGCAGAA...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCTTCTGCTTCATAATCTaGCAGTTCCAGCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRFCFII*QFQPCF
Trigger: AAAGCAAGGCTGGAACTGGCAGATTATGAAGCAGAA...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGATGCACCGGGCTCTGTaGCTGGGACTCTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGMHRAL*LGLFSH
Trigger: GTGACTGAAGAGTCCCAGGCACAGAGCCCGGTGCAT...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTGGAGCCAGAAACTCTTaGCAGATTTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALGARNS*QISSTL
Trigger: GAGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCC...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTCTCTCGGTCCACTCATaGCTCTTGAATTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPLSVHS*LLNLPE
Trigger: TTCTGGCAAATTCAAGAGGCATGAGTGGACCGAGAG...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTAGGCACCTGACTCGGTaGTTTACATACATTACCTCA +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFRHLTR*FTYITS
Trigger: TGAGGTAATGTATGTAAAGCACCGAGTCAGGTGCCT...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCCAAGAGAGGAACCATTaGCAGTGGGGGAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSQERNH*QWGKLG
Trigger: CCCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTG...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTCTGAGGGCACTGAGGTaGCTGCTGCTTGGGAACACC +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSLRALR*LLLGNT
Trigger: GGTGTTCCCAAGCAGCAGGCACCTCAGTGCCCTCAG...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAGGCTTAGAAAGCCCCTaGATCATGGGGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTGLESP*IMGRSR
Trigger: CCTGCTCCTCCCCATGATGCAGGGGCTTTCTAAGCC...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCATGCATGACCAAGTTCTaGGTGGTAGATGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSCMTKF*VVDGPW
Trigger: CCAAGGTCCATCTACCACGCAGAACTTGGTCATGCA...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCTTCAGGCCATCTGGCTaGGGCTGGACGTTTATATGT +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPFRPSG*GWTFIC
Trigger: ACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAA...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCCCAGAGAGTTCCTGCTaGTTAGTTCAGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCPESSC*LVQAIW
Trigger: CCAGATGGCCTGAACTAAGCAGCAGGAACTCTCTGG...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCAGCCCAGAGAGTTCCTaGTGCTTAGTTCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSSPESS*CLVQAI
Trigger: GATGGCCTGAACTAAGCAGCAGGAACTCTCTGGGCT...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACAGCCCAGAGAGTTCCTaGTGCTTAGTTCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYSPESS*CLVQAI
Trigger: GATGGCCTGAACTAAGCAGCAGGAACTCTCTGGGCT...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCTCAGCTAGTCCAAGCTaGAACTCAGAGTCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPSASPS*NSESQE
Trigger: CTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGA...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGACCCTCCAATACATTCTaGAGGGCCCAAAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGPSNTF*RAQRKR
Trigger: TCTCTTCCTTTGGGCCCTGCAGAATGTATTGGAGGG...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTTAGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGCACGTCCCCCTCTGCTGCGGTaGTGCTGCTCCCCGGACAGG +
Preference number: 4 (lower is better)
Translates to: FRIMDASEPSSINQDRARPPLLR*CCSPDR
Trigger: CCTGTCCGGGGAGCAGCAGCACCGCAGCAGAGGGGG...ACGTGCTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp ACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTATTCTCTGGCCCCCTCTaGTGCGGTGCTGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TYQNSPTTFAAEDYKVGLFSGPL*CGAAAP
Trigger: GGGAGCAGCAGCACCGCAGCAGAGGGGGCCAGAGAA...TAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp CCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACACTGCCCTCTTACAGAGATAGATaGCATAGTCAGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: PLASSSRGIDRRPGSTLPSYRDR*HSQCFQ
Trigger: CTGAAAACACTGACTATGCCATCTATCTCTGTAAGA...GGGCAGTGTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTCGCAAAGGCCCTCTaGAGTCTTGCTAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLLAKAL*SLAKFS
Trigger: AGAAAACTTAGCAAGACTCCAGAGGGCCTTTGCGAG...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGTTTTCCTGATTGGTTaGCTGAGTACATGCACCGGG +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSVFLIG*LSTCTG
Trigger: CCCGGTGCATGTACTCAGCCAACCAATCAGGAAAAC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGTGTTGTTTTCCTGATTaGTTGGCTGAGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLCCFPD*LAEYMH
Trigger: GTGCATGTACTCAGCCAACCAATCAGGAAAACAACA...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGAGGAATCGTAGAAACTaGTCCCGCCCCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGRNRRN*SRPTWS
Trigger: GGACCAGGTGGGGCGGGACCAGTTTCTACGATTCCT...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGAGGAATCGTAGAAACTaGTCCCGCCCCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVRNRRN*SRPTWS
Trigger: GGACCAGGTGGGGCGGGACCAGTTTCTACGATTCCT...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTTTTCTTCTACCCTCTTaGCCACATCCTGTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GIRAMYEGVGLLQRSPSIFLLPS*PHPVGV
Trigger: AACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAA...AATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGTTTCTGGCTTCTTCTTaGCCAGCAGCAAATCCTGGT +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLFLASS*PAANPG
Trigger: ACCAGGATTTGCTGCTGGCCAAGAAGAAGCCAGAAA...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000622468.4
CDS-3UTR CCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTTTTCTGGCTTCTTCTTaGCCAGCAGCAAATCCTGGT +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALFLASS*PAANPG
Trigger: ACCAGGATTTGCTGCTGGCCAAGAAGAAGCCAGAAA...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTCCAGCCCAGGCTCTGTaGACTCTTTCTTTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCPAQAL*TLSFWS
Trigger: AGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGG...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTaGAGTGTTGGAATACAACTG +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSGPLSE*SVGIQL
Trigger: CAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGACAGGCGGCGGTaGGGATGTAGTGGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSADDRRR*GCSGCN
Trigger: GTTACAGCCACTACATCCCCACCGCCGCCTGTCATC...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCTGCTTCCTCGAACGCTaGACCCTTGAGACATGTGAC +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSCFLER*TLETCD
Trigger: GTCACATGTCTCAAGGGTCCAGCGTTCGAGGAAGCA...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGAGGGGAGAATCCCAATaGCCCCTGAGTTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVERGESQ*PLSSWP
Trigger: TGGCCATGAACTCAGGGGCCATTGGGATTCTCCCCT...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTCACAGGGAATACAGGTaGATCTTTTGCAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPHREYR*IFCRFL
Trigger: CAAAAACCTGCAAAAGATCCACCTGTATTCCCTGTG...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAACCTCACAGCCAGGTTaGCAAATGGTCATTTTGACA +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGTSQPG*QMVILT
Trigger: TGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGT...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGGGGGGAGTGAATGTCTaGATTCAAAACAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLGGVNV*IQNRLL
Trigger: AAGTAACCTGTTTTGAATCCAGACATTCACTCCCCC...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACAAAGACCCCATAACTTaGAATGGGGCTTTATGCCAT +
Preference number: 4 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHKDPIT*NGALCH
Trigger: ATGGCATAAAGCCCCATTCCAAGTTATGGGGTCTTT...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCGTGGTAGATGGACCTTaGATAGGCAGCCTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSVVDGP*IGSLVP
Trigger: TGGAACGAGGCTGCCTATCCAAGGTCCATCTACCAC...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCGTTCTGCGTGGTAGATaGACCTTGGATAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVVLRGR*TLDRQP
Trigger: AGGCTGCCTATCCAAGGTCCATCTACCACGCAGAAC...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACGTTCTGCGTGGTAGATaGACCTTGGATAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYVLRGR*TLDRQP
Trigger: AGGCTGCCTATCCAAGGTCCATCTACCACGCAGAAC...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTTGTAGACCAGGCCAATaGGGGACGGGCCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSCRPGQ*GTGQDQ
Trigger: CTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACA...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGTGTAGACCAGGCCAATaGGGGACGGGCCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQCRPGQ*GTGQDQ
Trigger: CTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACA...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCTGCCAAGATGTGGCTaGAGAGCACTTTTCCTCATA +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRLPRCG*RALFLI
Trigger: TATGAGGAAAAGTGCTCTCCAGCCACATCTTGGCAG...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCTGCCCTGATGCTGTaGTTGTGGGGCTGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRAALML*LWGCQD
Trigger: ATCTTGGCAGCCCCACAACCACAGCATCAGGGCAGC...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAGCTGCCCTGATGCTGTaGTTGTGGGGCTGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTAALML*LWGCQD
Trigger: ATCTTGGCAGCCCCACAACCACAGCATCAGGGCAGC...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTCAGATGCCAGTGCCTaGTGCCTTGTGTGTCTAACC +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSSDASA*CLVCLT
Trigger: GGTTAGACACACAAGGCACCAGGCACTGGCATCTGA...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGCCCTGCTTTGTTCCTaGGGTATAGCAACACCTTCC +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSALLCS*GIATPS
Trigger: GGAAGGTGTTGCTATACCCCAGGAACAAAGCAGGGC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGACTGCACTGGCAGTTaGGCCCTGCTTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVDCTGS*ALLCSW
Trigger: CCAGGAACAAAGCAGGGCCCAACTGCCAGTGCAGTC...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGATGGGTGGCAGGCTCCTaGTTCAGCGTCCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRWVAGS*FSVLLV
Trigger: CACCAACAGGACGCTGAACCAGGAGCCTGCCACCCA...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTAGGCTTTCCTGGTGGTaGTTTTTGAAGCACATGTAT +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPRLSWW*FLKHMY
Trigger: ATACATGTGCTTCAAAAACCACCACCAGGAAAGCCT...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCCTGGGAAGGCTTTCCTaGTGGTGGTTTTTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPLGRLS*WWFLKH
Trigger: GTGCTTCAAAAACCACCACCAGGAAAGCCTTCCCAG...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCACATCTGCTGTTGCTATaGTTACACGAGCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSHLLLL*LHEHRP
Trigger: AGGCCTGTGCTCGTGTAACCATAGCAACAGCAGATG...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGGGGATGCCTTATCACTaGGTGGTACTAATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLGMPYH*VVLMSR
Trigger: CCTACTCATTAGTACCACCCAGTGATAAGGCATCCC...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTGGGATGCCTTATCACTaGGTGGTACTAATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPGMPYH*VVLMSR
Trigger: CCTACTCATTAGTACCACCCAGTGATAAGGCATCCC...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCTACTTTGCTACTTTATaGCCCCTGGGTCTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPYFATL*PLGLAQ
Trigger: CTGGGCTAGACCCAGGGGCCATAAAGTAGCAAAGTA...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTGGAGAACTCTCCTCTaGGTCAGCAACCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVWRTLL*VSNPHC
Trigger: GCAGTGGGGGTTGCTGACCCAGAGGAGAGTTCTCCA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTGTTGGATGGCTCAGCTaGTGTTATCAAAGGGTCATA +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFVGWLS*CYQRVI
Trigger: TATGACCCTTTGATAACACCAGCTGAGCCATCCAAC...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCGATCCAAGGGTTGGATaGCTCAGCTGGTGTTATCAA +
Preference number: 4 (lower is better)
Translates to: IRAMYEGVGLLQRSPSIGDPRVG*LSWCYQ
Trigger: TTGATAACACCAGCTGAGCCATCCAACCCTTGGATC...GCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp ATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCTTACTCGCTGTTGGCTaGGCTCTTTGCTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: IRAMYEGVGLLQRSPSIGLLAVG*ALCSSL
Trigger: TAGAGATGAGCAAAGAGCCCAGCCAACAGCGAGTAA...GCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp ATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCCTTTTTACTCGCTGTTaGCTGGGCTCTTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: IRAMYEGVGLLQRSPSIGLFTRC*LGSLLI
Trigger: GATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAG...GCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355512.10
3UTR CAA 72 bp CAAATGCTGGATGTGCTCTCGGTCCACTCATGCCTCTaGAATTTGCCAGAAGGTGTGACCGTCTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: QMLDVLSVHSCL*NLPEGVTVSRQ
Trigger: CTGTCTGGAGACGGTCACACCTTCTGGCAAATTCAAGAGGCATGAGTGGACCGAGAGCACATCCAGCATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 72 bp GAGGCCGGGTCTGCAAATAAGCAAGCATCTGAGCCTTaGGTCACCAGCTGGCGAATTTGGCTGCATGAGAAA +
Preference number: 4 (lower is better)
Translates to: EAGSANKQASEP*VTSWRIWLHEK
Trigger: TTTCTCATGCAGCCAAATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTTGCTTATTTGCAGACCCGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 72 bp GCTGTGGGGTGGTGTGAGAGTATTATTGCTCTGGGTTaGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: AVGWCESIIALG*SPSEVSLAPLC
Trigger: GCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACCCAGAGCAATAATACTCTCACACCACCCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 72 bp TGGACCTTGGATAGGCAGCCTCGTTCCACTCCCTTCTaGCAAAGCTTCTGGCTTGATCTACTGGGGAACATG +
Preference number: 4 (lower is better)
Translates to: WTLDRQPRSTPF*QSFWLDLLGNM
Trigger: CATGTTCCCCAGTAGATCAAGCCAGAAGCTTTGCAAGAAGGGAGTGGAACGAGGCTGCCTATCCAAGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCCAATGTCAGTACCTGTaGCGACACTGGGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSQCQYL*RHWGFW
Trigger: CCAAAATCCCCAGTGTCGTCACAGGTACTGACATTG...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGTGTGAGAATCCAGGTTaGTTGCACTTGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVECENPG*LHLEPL
Trigger: CAGGGGCTCCAAGTGCAATCAACCTGGATTCTCACA...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGCTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGG +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMLSPSQ*PSLLVR
Trigger: CCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAG...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGATTTGCCAGAAGGTGTaGCCGTCTCCAGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRICQKV*PSPDSE
Trigger: CTCGCTGTCTGGAGACGGTCACACCTTCTGGCAAAT...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACACAGAGACGTGAGGGATaGCAGGCGGCGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: YIHYLTARLANGHFDTHTQRREG*QAAVGM
Trigger: CATCCCCACCGCCGCCTGTCATCCCTCACGTCTCTG...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCATTTGGACATTTTACGTaGAAGCAGTGCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSFGHFT*KQCLVL
Trigger: CAGCACCAGGCACTGCTTTCACGTAAAATGTCCAAA...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAAATCCCAATGGCCCCTaGGTTCATGGCCATGTTTAT +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSNPNGP*VHGHVY
Trigger: ATAAACATGGCCATGAACTCAGGGGCCATTGGGATT...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCGGCAAATGGTCATTTTaGCACACACACACAGGGAAT +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRGKWSF*HTHTGN
Trigger: ATTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCC...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTCTCCGTTGTGCTTACTaGCCCTCCCCTCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSLRCAY*PSPLDV
Trigger: GACATCCAGAGGGGAGGGTCAGTAAGCACAACGGAG...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGAGCTGTGGGGTGGTGTaGGAGTATTATTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVESCGVV*EYYCSG
Trigger: CCCAGAGCAATAATACTCTCACACCACCCCACAGCT...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACGCAAAGCTTCTGGCTTaGTCTACTGGGGAACATGAG +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYAKLLA*STGEHE
Trigger: CTCATGTTCCCCAGTAGATCAAGCCAGAAGCTTTGC...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGGCAAAGCTTCTGGCTTaGTCTACTGGGGAACATGAG +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMAKLLA*STGEHE
Trigger: CTCATGTTCCCCAGTAGATCAAGCCAGAAGCTTTGC...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCGTTGGTGAGGTAGTTTaGAATCCCAGGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVVGEVV*NPRNPA
Trigger: GGCAGGATTCCTGGGATTTCAAACTACCTCACCAAC...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGGTTGGTGAGGTAGTTTaGAATCCCAGGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMVGEVV*NPRNPA
Trigger: GGCAGGATTCCTGGGATTTCAAACTACCTCACCAAC...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCATTCCGATGAGTCCGTaGTCATGCGGTGAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSIPMSP*SCGEWA
Trigger: AGCCCACTCACCGCATGATCACGGACTCATCGGAAT...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTTCTTCATAAGCCACTaGACAATGTCAGTACCTGTG +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLFFISH*TMSVPV
Trigger: CACAGGTACTGACATTGTGCAGTGGCTTATGAAGAA...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGCTCCCCAAGTGTATTaGTTCAACTGGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHAPQVY*FNWVLN
Trigger: ATTGAGGACCCAGTTGAAGCAATACACTTGGGGAGC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTTCTGCTTCATAATCTaGCAGTTCCAGCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLFCFII*QFQPCF
Trigger: AAAGCAAGGCTGGAACTGGCAGATTATGAAGCAGAA...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAATGCACCGGGCTCTGTaGCTGGGACTCTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRMHRAL*LGLFSH
Trigger: GTGACTGAAGAGTCCCAGGCACAGAGCCCGGTGCAT...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGTGTCATCTACAACAGTaGTTCCTCGAACGCTGGACC +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQCHLQQ*FLERWT
Trigger: GGTCCAGCGTTCGAGGAAGCACTGTTGTAGATGACA...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTTGTCATCTACAACAGTaGTTCCTCGAACGCTGGACC +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCCHLQQ*FLERWT
Trigger: GGTCCAGCGTTCGAGGAAGCACTGTTGTAGATGACA...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATCTTCGTAGCATACTCTaGCCCAGCTTCACACACAAA +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHLRSIL*PSFTHK
Trigger: TTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAG...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGACCGGTTTAGAGGGGTaGTTTGGCTGGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVTGLEG*FGWAFR
Trigger: TCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGT...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGAGGCACCTGACTCGGTaGTTTACATACATTACCTCA +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLRHLTR*FTYITS
Trigger: TGAGGTAATGTATGTAAAGCACCGAGTCAGGTGCCT...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGATCTGTGCTGAGCATGTaGAGGTGTCCAGCAAGAATT +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRSVLSM*RCPARI
Trigger: AATTCTTGCTGGACACCTGCACATGCTCAGCACAGA...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGATCTGTGCTGAGCATGTaGAGGTGTCCAGCAAGAATT +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGSVLSM*RCPARI
Trigger: AATTCTTGCTGGACACCTGCACATGCTCAGCACAGA...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGACACCCTTTGCCCTATaGCTAGGGGTCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKTPFAL*LGVSTA
Trigger: GGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGT...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAGTCACTTGCTGCAGCTaGCCTGATGCTGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTVTCCS*PDAVVV
Trigger: CACAACCACAGCATCAGGGCAGCTGCAGCAAGTGAC...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACTTAGTCAGATGCCAGTaGCTGGTGCCTTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYLVRCQ*LVPCVS
Trigger: AGACACACAAGGCACCAGGCACTGGCATCTGACTAA...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTGTTATTTTAGTCAGATaGCAGTGCCTGGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPVILVR*QCLVPC
Trigger: ACAAGGCACCAGGCACTGGCATCTGACTAAAATAAC...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCGCAGAACAGGAGGGATaGATTTTAGGAAAAACATCA +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRAEQEG*ILGKTS
Trigger: TGATGTTTTTCCTAAAATGCATCCCTCCTGTTCTGC...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTGCAGAACAGGAGGGATaGATTTTAGGAAAAACATCA +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPAEQEG*ILGKTS
Trigger: TGATGTTTTTCCTAAAATGCATCCCTCCTGTTCTGC...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCCCTCCAATACATTCTaGAGGGCCCAAAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCPSNTF*RAQRKR
Trigger: TCTCTTCCTTTGGGCCCTGCAGAATGTATTGGAGGG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTTTATCCCATGGTCTTTaGTACATATTCAACTTGGGC +
Preference number: 4 (lower is better)
Translates to: KSPRKETLSADVERRRLPLSHGL*YIFNLG
Trigger: GCCCAAGTTGAATATGTAGCAAAGACCATGGGATAA...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCGCTGGCATCTGCTGTTaGTATGGTTACACGAGCACA +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSAGICC*YGYTST
Trigger: TGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGC...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGGCTGGCATCTGCTGTTaGTATGGTTACACGAGCACA +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMAGICC*YGYTST
Trigger: TGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGC...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTCCTGGCACAGGCCTGTaGACATCCCAAAAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFPGTGL*TSQKAR
Trigger: ACGAGCCTTTTGGGATGTCCACAGGCCTGTGCCAGG...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGTGTGTTCACACAGCCTaGCACAGGCCTGTGGACATC +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRCVHTA*HRPVDI
Trigger: GATGTCCACAGGCCTGTGCCAGGCTGTGTGAACACA...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTGTGTTCACACAGCCTaGCACAGGCCTGTGGACATC +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVCVHTA*HRPVDI
Trigger: GATGTCCACAGGCCTGTGCCAGGCTGTGTGAACACA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTTGTTGTTTTCCTGATTaGTTGGCTGAGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFCCFPD*LAEYMH
Trigger: GTGCATGTACTCAGCCAACCAATCAGGAAAACAACA...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTGGTCCCGCCCCACCTaGTCCTTCAATATCTCATCG +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVWSRPT*SFNISS
Trigger: CGATGAGATATTGAAGGACCAGGTGGGGCGGGACCA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCTGTTTCTTAAGATCTTaGACAGCCAGCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: IRAMYEGVGLLQRSPSIGCFLRS*TASQNL
Trigger: CAGGTTCTGGCTGGCTGTCCAAGATCTTAAGAAACA...GCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTTGTTTCTTAAGATCTTaGACAGCCAGCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALCFLRS*TASQNL
Trigger: CAGGTTCTGGCTGGCTGTCCAAGATCTTAAGAAACA...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAATGGACTCTTTCTTTCTaGTCTCCCCATTCACCCACC +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQWTLSF*SPHSPT
Trigger: GGTGGGTGAATGGGGAGACCAGAAAGAAAGAGTCCA...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACTGGACTCTTTCTTTCTaGTCTCCCCATTCACCCACC +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYWTLSF*SPHSPT
Trigger: GGTGGGTGAATGGGGAGACCAGAAAGAAAGAGTCCA...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCCAGCCCAGGCTCTGTaGACTCTTTCTTTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNEPAQAL*TLSFWS
Trigger: AGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGG...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCGGGCCTCTTAGCGAGTaGAGTGTTGGAATACAACTG +
Preference number: 4 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCGPLSE*SVGIQL
Trigger: CAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCC...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACGGGCCTCTTAGCGAGTaGAGTGTTGGAATACAACTG +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYGPLSE*SVGIQL
Trigger: CAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCC...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCATTTAGAGGGGTGCTTTaGCTGGGCCTTCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSFRGVL*LGLQIK
Trigger: CTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAA...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCCACAGGGAATACAGGTaGATCTTTTGCAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSHREYR*IFCRFL
Trigger: CAAAAACCTGCAAAAGATCCACCTGTATTCCCTGTG...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGACCTCACAGCCAGGTTaGCAAATGGTCATTTTGACA +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLTSQPG*QMVILT
Trigger: TGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGT...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCCTTTGGTCACCAGCTaGCGAATTTGGCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNEPLVTS*RIWLHE
Trigger: CTCATGCAGCCAAATTCGCCAGCTGGTGACCAAAGG...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATAAGCATCTGAGCCTTTaGTCACCAGCTGGCGAATTT +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHKHLSL*SPAGEF
Trigger: AAATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTT...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACATCCTTGGGCAAGGCTaGGGGCAAATGAACTTAGAC +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYILGQG*GQMNLD
Trigger: GTCTAAGTTCATTTGCCCCCAGCCTTGCCCAAGGAT...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCTTCTTGCAAAGCTTCTaGCTTGATCTACTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRFLQSF*LDLLGN
Trigger: GTTCCCCAGTAGATCAAGCCAGAAGCTTTGCAAGAA...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTTCTAGTCTGAATTTTTaGCTGTGTAGACCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFSSLNF*LCRPGQ
Trigger: TTGGCCTGGTCTACACAGCCAAAAATTCAGACTAGA...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACCCATCTGGCTGCGGCTaGACGTTTATATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYPSGCG*TFICAS
Trigger: GCTGGCACATATAAACGTCCAGCCGCAGCCAGATGG...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGACTGCACTGGCAGTTaGGCCCTGCTTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRDCTGS*ALLCSW
Trigger: CCAGGAACAAAGCAGGGCCCAACTGCCAGTGCAGTC...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAAACCAAGGGGGCCAGTTaGGTGGCAGGCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQTKGAS*VAGSWF
Trigger: GAACCAGGAGCCTGCCACCCAACTGGCCCCCTTGGT...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACCTGGGAAGGCTTTCCTaGTGGTGGTTTTTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYLGRLS*WWFLKH
Trigger: GTGCTTCAAAAACCACCACCAGGAAAGCCTTCCCAG...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCCTGGGAAGGCTTTCCTaGTGGTGGTTTTTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSLGRLS*WWFLKH
Trigger: GTGCTTCAAAAACCACCACCAGGAAAGCCTTCCCAG...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCATCTGCTGTTGCTATaGTTACACGAGCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCHLLLL*LHEHRP
Trigger: AGGCCTGTGCTCGTGTAACCATAGCAACAGCAGATG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGATGCCTTATCACTaGGTGGTACTAATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSGMPYH*VVLMSR
Trigger: CCTACTCATTAGTACCACCCAGTGATAAGGCATCCC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGCAAGTCCTGGTCATTTaGACCCTGTCCCCGTATAGA +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMQVLVI*TLSPYR
Trigger: TCTATACGGGGACAGGGTCCAAATGACCAGGACTTG...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCAAGTCCTGGTCATTTaGACCCTGTCCCCGTATAGA +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCQVLVI*TLSPYR
Trigger: TCTATACGGGGACAGGGTCCAAATGACCAGGACTTG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCCAAGTCCTGGTCATTTaGACCCTGTCCCCGTATAGA +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVQVLVI*TLSPYR
Trigger: TCTATACGGGGACAGGGTCCAAATGACCAGGACTTG...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGCAGGGACCCCTGGTATaGAGCAGGGCCTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLQGPLV*SRAFPP
Trigger: GGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTG...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTTCATCCATGAGATCTaGGCTGGAGTTATCAAAAGT +
Preference number: 4 (lower is better)
Translates to: EPCMRVSASSKGAPPLASFIHEI*AGVIKS
Trigger: ACTTTTGATAACTCCAGCCCAGATCTCATGGATGAA...GGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp GTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGTGTAATGTGCGACTCTGACAGCCCGTaGCAGCTTCTTGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: VGLSVVLDAPSPFPSVMCDSDSP*QLLGVR
Trigger: CCGCACACCAAGAAGCTGCCACGGGCTGTCAGAGTC...GCACATTACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR TCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGAACCTGAGGTTTTCTaGACTGAATTCGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSEPEVF*TEFGLQ
Trigger: CTGGAGTCCGAATTCAGTTCAGAAAACCTCAGGTTC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTGTGAGAATCCAGGTTaGTTGCACTTGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVCENPG*LHLEPL
Trigger: CAGGGGCTCCAAGTGCAATCAACCTGGATTCTCACA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACATCCTGGTAAGCATTTaGCCGGAGGAAGCGGGCATA +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYILVSI*PEEAGI
Trigger: TATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGAT...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAATCCTGGTAAGCATTTaGCCGGAGGAAGCGGGCATA +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAILVSI*PEEAGI
Trigger: TATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGAT...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGG +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVELSPSQ*PSLLVR
Trigger: CCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAG...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCTTTGGACATTTTACGTaGAAGCAGTGCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSFGHFT*KQCLVL
Trigger: CAGCACCAGGCACTGCTTTCACGTAAAATGTCCAAA...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTAGGCGGGGCAATCCGTaGGGTTGCTTTCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFRRGNP*GCFLAE
Trigger: TTCAGCAAGAAAGCAACCTCACGGATTGCCCCGCCT...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGGCGGGGCAATCCGTaGGGTTGCTTTCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKRRGNP*GCFLAE
Trigger: TTCAGCAAGAAAGCAACCTCACGGATTGCCCCGCCT...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGACCTCTCCGAACGCTaGTCTCAAAGAGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVDLSER*SQRGWK
Trigger: TTTCCACCCTCTTTGAGATCAGCGTTCGGAGAGGTC...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAGACCTCTCCGAACGCTaGTCTCAAAGAGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTDLSER*SQRGWK
Trigger: TTTCCACCCTCTTTGAGATCAGCGTTCGGAGAGGTC...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACGAATCCCCGCAGCTGTaGAACAAAAAGCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYESPQL*NKKLCH
Trigger: ATGACAGAGCTTTTTGTTTCACAGCTGCGGGGATTC...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCGAATCCCCGCAGCTGTaGAACAAAAAGCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCESPQL*NKKLCH
Trigger: ATGACAGAGCTTTTTGTTTCACAGCTGCGGGGATTC...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTCACACAAAGGAGACCTaGCCCAGCAAGGGTCTCACT +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSHTKET*PSKGLT
Trigger: AGTGAGACCCTTGCTGGGTCAGGTCTCCTTTGTGTG...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAGGCAAATGGTCATTTTaGCACACACACACAGGGAAT +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGGKWSF*HTHTGN
Trigger: ATTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCC...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGCGAATTTGGCTGCATaGGAAAAGAAATACCAGCGA +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHANLAA*EKKYQR
Trigger: TCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGGGTTTGAGTCCATCTaGAGTCTCCCTAGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAGFESI*SLPSSV
Trigger: AACGGAGCTAGGGAGACTTCAGATGGACTCAAACCC...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGGGTTTGAGTCCATCTaGAGTCTCCCTAGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRGFESI*SLPSSV
Trigger: AACGGAGCTAGGGAGACTTCAGATGGACTCAAACCC...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTTATTGCTCTGGGTTTaGGTCCATCTGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMLLLWV*VHLKSP
Trigger: GGGAGACTTCAGATGGACTCAAACCCAGAGCAATAA...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCACATCTAATCTAGTCTaGATTTTTGGCTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRTSNLV*IFGCVD
Trigger: GTCTACACAGCCAAAAATTCAGACTAGATTAGATGT...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGGTTGGTGAGGTAGTTTaGAATCCCAGGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVEVGEVV*NPRNPA
Trigger: GGCAGGATTCCTGGGATTTCAAACTACCTCACCAAC...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGGTTGGTGAGGTAGTTTaGAATCCCAGGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNEVGEVV*NPRNPA
Trigger: GGCAGGATTCCTGGGATTTCAAACTACCTCACCAAC...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACCTGGTGGTGGTTTTTaGAGCACATGTATATGGAGC +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQPGGGF*STCIWS
Trigger: GCTCCATATACATGTGCTTCAAAAACCACCACCAGG...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGCAGAGGGTCCCATGGTaGGTTATTAGTGATTCGTCT +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMQRVPW*VISDSS
Trigger: AGACGAATCACTAATAACTCACCATGGGACCCTCTG...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGTCCGTGATCATGCGGTaGGTGGGCTTAGAGTATAGA +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVESVIMR*VGLEYR
Trigger: TCTATACTCTAAGCCCACTCACCGCATGATCACGGA...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAAAGCAACGTCATCGCTaGTCCAAGGGTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAKQRHR*SKGWMA
Trigger: AGCCATCCAACCCTTGGATCAGCGATGACGTTGCTT...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGATCCTTGAGCCATCCTaGGTGTCTTCACTCACACTG +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVEILEPS*VSSLTL
Trigger: CAGTGTGAGTGAAGACACTCAGGATGGCTCAAGGAT...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
CDS-3UTR GCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTTCTTCATAAGCCACTaGACAATGTCAGTACCTGTG +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPFFISH*TMSVPV
Trigger: CACAGGTACTGACATTGTGCAGTGGCTTATGAAGAA...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGCTCCCCAAGTGTATTaGTTCAACTGGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSAPQVY*FNWVLN
Trigger: ATTGAGGACCCAGTTGAAGCAATACACTTGGGGAGC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGGCTCCCCAAGTGTATTaGTTCAACTGGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMAPQVY*FNWVLN
Trigger: ATTGAGGACCCAGTTGAAGCAATACACTTGGGGAGC...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGCATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTTTCTGCTTCATAATCTaGCAGTTCCAGCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GIRAMYEGVGLLQRSPSIFCFII*QFQPCF
Trigger: AAAGCAAGGCTGGAACTGGCAGATTATGAAGCAGAA...AATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR GCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTATGCACCGGGCTCTGTaGCTGGGACTCTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: KNSQGYNITKTPNARDGTMHRAL*LGLFSH
Trigger: GTGACTGAAGAGTCCCAGGCACAGAGCCCGGTGCAT...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCATGTCTGTCGATCTGTaGGTTCAAAAATGTTATCTG +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRMSVDL*VQKCYL
Trigger: CAGATAACATTTTTGAACGCACAGATCGACAGACAT...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCCTCTCGGTCCACTCATaGCTCTTGAATTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSLSVHS*LLNLPE
Trigger: TTCTGGCAAATTCAAGAGGCATGAGTGGACCGAGAG...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTCTCTCGGTCCACTCATaGCTCTTGAATTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCLSVHS*LLNLPE
Trigger: TTCTGGCAAATTCAAGAGGCATGAGTGGACCGAGAG...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACATGCAAATGCTGGATGTaGTCTCGGTCCACTCATGCC +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTCKCWM*SRSTHA
Trigger: GGCATGAGTGGACCGAGAGCACATCCAGCATTTGCA...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAATGTAACTATGGGAGGTaGCAGGGAGGTGATGCAAAT +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQCNYGR*QGGDAN
Trigger: ATTTGCATCACCTCCCTGGCACCTCCCATAGTTACA...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCCTTCGTAGCATACTCTaGCCCAGCTTCACACACAAA +
Preference number: 4 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCLRSIL*PSFTHK
Trigger: TTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAG...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCTTCGTAGCATACTCTaGCCCAGCTTCACACACAAA +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCLRSIL*PSFTHK
Trigger: TTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTACCGGTTTAGAGGGGTaGTTTGGCTGGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSTGLEG*FGWAFR
Trigger: TCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGT...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTTACAGGTGGATCTTTTaGAGGTTTTTGCATTTCCCC +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALYRWIF*RFLHFP
Trigger: GGGGAAATGCAAAAACCTGCAAAAGATCCACCTGTA...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCGCTGGCGAATTTGGCTaGATGAGAAAAGAAATACCA +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRAGEFG*MRKEIP
Trigger: TGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGC...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTTCTGTGCTGAGCATGTaGAGGTGTCCAGCAAGAATT +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCSVLSM*RCPARI
Trigger: AATTCTTGCTGGACACCTGCACATGCTCAGCACAGA...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTACACCCTTTGCCCTATaGCTAGGGGTCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: KNSQGYNITKTPNARDGTTPFAL*LGVSTA
Trigger: GGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGT...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGTCCCTAGCTCCGTTGTaGTTACTGACCCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQSLAPL*LLTLPS
Trigger: AGAGGGGAGGGTCAGTAAGCACAACGGAGCTAGGGA...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGTGCATGACCAAGTTCTaGGTGGTAGATGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVECMTKF*VVDGPW
Trigger: CCAAGGTCCATCTACCACGCAGAACTTGGTCATGCA...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGATTTTCCAAATGTACTTaGATGACCAAGTTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGFSKCT*MTKFCV
Trigger: CACGCAGAACTTGGTCATGCAAGTACATTTGGAAAA...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTGTCACTTGCTGCAGCTaGCCTGATGCTGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSVTCCS*PDAVVV
Trigger: CACAACCACAGCATCAGGGCAGCTGCAGCAAGTGAC...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAGTTATTTTAGTCAGATaGCAGTGCCTGGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGVILVR*QCLVPC
Trigger: ACAAGGCACCAGGCACTGGCATCTGACTAAAATAAC...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCACCAGCTCCTGGACCTTaGAGCAACACCTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISPAPGP*SNTSLQ
Trigger: TTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGG...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAACCCGGGCCCTTTATTaGTACATTTGCTACTTTGCT +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSTRALY*YICYFA
Trigger: AGCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGT...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAACCCGGGCCCTTTATTaGTACATTTGCTACTTTGCT +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGTRALY*YICYFA
Trigger: AGCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGT...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGTCTTACAGAGATAGATaGCATAGTCAGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLSYRDR*HSQCFQ
Trigger: CTGAAAACACTGACTATGCCATCTATCTCTGTAAGA...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGCTCGCAAAGGCCCTCTaGAGTCTTGCTAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMLAKAL*SLAKFS
Trigger: AGAAAACTTAGCAAGACTCCAGAGGGCCTTTGCGAG...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCTCGCAAAGGCCCTCTaGAGTCTTGCTAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCLAKAL*SLAKFS
Trigger: AGAAAACTTAGCAAGACTCCAGAGGGCCTTTGCGAG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTCTCGCAAAGGCCCTCTaGAGTCTTGCTAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCLAKAL*SLAKFS
Trigger: AGAAAACTTAGCAAGACTCCAGAGGGCCTTTGCGAG...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTTGTTGTTTTCCTGATTaGTTGGCTGAGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: GIRAMYEGVGLLQRSPSICCFPD*LAEYMH
Trigger: GTGCATGTACTCAGCCAACCAATCAGGAAAACAACA...AATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCAAGGAATCGTAGAAACTaGTCCCGCCCCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISRNRRN*SRPTWS
Trigger: GGACCAGGTGGGGCGGGACCAGTTTCTACGATTCCT...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCTGTTTCTTAAGATCTTaGACAGCCAGCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPCFLRS*TASQNL
Trigger: CAGGTTCTGGCTGGCTGTCCAAGATCTTAAGAAACA...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGTTTCTTCTACCCTCTTaGCCACATCCTGTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQFLLPS*PHPVGV
Trigger: AACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAA...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTTTTCTGGCTTCTTCTTaGCCAGCAGCAAATCCTGGT +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCFLASS*PAANPG
Trigger: ACCAGGATTTGCTGCTGGCCAAGAAGAAGCCAGAAA...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000622468.4
CDS-3UTR CCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACACCAGCCCAGGCTCTGTaGACTCTTTCTTTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTPAQAL*TLSFWS
Trigger: AGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGG...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACATGCTTCCTCGAACGCTaGACCCTTGAGACATGTGAC +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTCFLER*TLETCD
Trigger: GTCACATGTCTCAAGGGTCCAGCGTTCGAGGAAGCA...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCTTTAGAGGGGTGCTTTaGCTGGGCCTTCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCFRGVL*LGLQIK
Trigger: CTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAA...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCACAGGGAATACAGGTaGATCTTTTGCAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLHREYR*IFCRFL
Trigger: CAAAAACCTGCAAAAGATCCACCTGTATTCCCTGTG...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGAACCTCACAGCCAGGTTaGCAAATGGTCATTTTGACA +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRTSQPG*QMVILT
Trigger: TGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGT...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGGGGGGAGTGAATGTCTaGATTCAAAACAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLGGVNV*IQNRLL
Trigger: AAGTAACCTGTTTTGAATCCAGACATTCACTCCCCC...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGAGGAACCATTGCCAGTaGGGGAAACTTGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRRNHCQ*GKLGHG
Trigger: ACCATGCCCAAGTTTCCCCCACTGGCAATGGTTCCT...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAGGAACCATTGCCAGTaGGGGAAACTTGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTRNHCQ*GKLGHG
Trigger: ACCATGCCCAAGTTTCCCCCACTGGCAATGGTTCCT...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTAAAGACCCCATAACTTaGAATGGGGCTTTATGCCAT +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALKDPIT*NGALCH
Trigger: ATGGCATAAAGCCCCATTCCAAGTTATGGGGTCTTT...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGATCCTTGGGCAAGGCTaGGGGCAAATGAACTTAGAC +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVEILGQG*GQMNLD
Trigger: GTCTAAGTTCATTTGCCCCCAGCCTTGCCCAAGGAT...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACACAGCCCGGGGATCCTTaGGCAAGGCTGGGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: YIHYLTARLANGHFDTHTQPGDP*ARLGAN
Trigger: ATTTGCCCCCAGCCTTGCCCAAGGATCCCCGGGCTG...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGCAGTCCACCTGGCTCTaGTCAGATCCTCTGGGGATC +
Preference number: 4 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLQSTWL*SDPLGI
Trigger: GATCCCCAGAGGATCTGACCAGAGCCAGGTGGACTG...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGTGGTAGATGGACCTTaGATAGGCAGCCTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRVVDGP*IGSLVP
Trigger: TGGAACGAGGCTGCCTATCCAAGGTCCATCTACCAC...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGGTTCTGCGTGGTAGATaGACCTTGGATAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGVLRGR*TLDRQP
Trigger: AGGCTGCCTATCCAAGGTCCATCTACCACGCAGAAC...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGTTCTGCGTGGTAGATaGACCTTGGATAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSVLRGR*TLDRQP
Trigger: AGGCTGCCTATCCAAGGTCCATCTACCACGCAGAAC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCTGCCAAGATGTGGCTaGAGAGCACTTTTCCTCATA +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCLPRCG*RALFLI
Trigger: TATGAGGAAAAGTGCTCTCCAGCCACATCTTGGCAG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGGGGCTGCCAAGATGTaGCTGGAGAGCACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRGAAKM*LESTFP
Trigger: AGGAAAAGTGCTCTCCAGCCACATCTTGGCAGCCCC...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGGCTGCCCTGATGCTGTaGTTGTGGGGCTGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLAALML*LWGCQD
Trigger: ATCTTGGCAGCCCCACAACCACAGCATCAGGGCAGC...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACATCAGATGCCAGTGCCTaGTGCCTTGTGTGTCTAACC +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTSDASA*CLVCLT
Trigger: GGTTAGACACACAAGGCACCAGGCACTGGCATCTGA...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAGCCCTGCTTTGTTCCTaGGGTATAGCAACACCTTCC +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTALLCS*GIATPS
Trigger: GGAAGGTGTTGCTATACCCCAGGAACAAAGCAGGGC...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGGGAAGGCTTTCCTGGTaGTGGTTTTTGAAGCACATG +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQGRLSW*WFLKHM
Trigger: CATGTGCTTCAAAAACCACCACCAGGAAAGCCTTCC...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAAGGAAGGCTTTCCTGGTaGTGGTTTTTGAAGCACATG +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQGRLSW*WFLKHM
Trigger: CATGTGCTTCAAAAACCACCACCAGGAAAGCCTTCC...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACGGAAGGCTTTCCTGGTaGTGGTTTTTGAAGCACATG +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYGRLSW*WFLKHM
Trigger: CATGTGCTTCAAAAACCACCACCAGGAAAGCCTTCC...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCAGAGAGGGCCAAGTCCTaGTCATTTGGACCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISERAKS*SFGPCP
Trigger: GGGACAGGGTCCAAATGACCAGGACTTGGCCCTCTC...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACCTGTACCAGCATGTTTaGTTCTGGGGTCCAATCCCC +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYLYQHV*FWGPIP
Trigger: GGGGATTGGACCCCAGAACCAAACATGCTGGTACAG...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGTAAACGATCATGTTTaGAGAACTCTCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHVNDHV*RTLLWV
Trigger: GACCCAGAGGAGAGTTCTCCAAACATGATCGTTTAC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000553530.5
CDS-3UTR CCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGGATCCAAGGGTTGGATaGCTCAGCTGGTGTTATCAA +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQDPRVG*LSWCYQ
Trigger: TTGATAACACCAGCTGAGCCATCCAACCCTTGGATC...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGTTACTCGCTGTTGGCTaGGCTCTTTGCTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQLLAVG*ALCSSL
Trigger: TAGAGATGAGCAAAGAGCCCAGCCAACAGCGAGTAA...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCTTACTCGCTGTTGGCTaGGCTCTTTGCTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSLLAVG*ALCSSL
Trigger: TAGAGATGAGCAAAGAGCCCAGCCAACAGCGAGTAA...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTACTCGCTGTTGGCTaGGCTCTTTGCTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSLLAVG*ALCSSL
Trigger: TAGAGATGAGCAAAGAGCCCAGCCAACAGCGAGTAA...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGCTTTTTACTCGCTGTTaGCTGGGCTCTTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQLFTRC*LGSLLI
Trigger: GATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAG...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCCTTTTTACTCGCTGTTaGCTGGGCTCTTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSLFTRC*LGSLLI
Trigger: GATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAG...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCTTTTTACTCGCTGTTaGCTGGGCTCTTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCLFTRC*LGSLLI
Trigger: GATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCCTTTTTACTCGCTGTTaGCTGGGCTCTTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCLFTRC*LGSLLI
Trigger: GATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAG...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GCACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTCCAGACTCCTGCCATTaGATGCTCTTTCTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ARIRIPPPLLLQKITRLGPDSCH*MLFLWP
Trigger: GGGCCAGAGAAAGAGCATCCAATGGCAGGAGTCTGG...ACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
3UTR CAA 72 bp TACTTGCATGACCAAGTTCTGCGTGGTAGATGGACCTaGGATAGGCAGCCTCGTTCCACTCCCTTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: YLHDQVLRGRWT*DRQPRSTPFLQ
Trigger: TTGCAAGAAGGGAGTGGAACGAGGCTGCCTATCCAAGGTCCATCTACCACGCAGAACTTGGTCATGCAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 72 bp TGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTaGCTACTTTGCTACTTTATGGCCCCTGGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: CPRIDPGPLLLH*LLCYFMAPGSS
Trigger: GCTAGACCCAGGGGCCATAAAGTAGCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCACAATGTCAGTACCTGTaGCGACACTGGGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAQCQYL*RHWGFW
Trigger: CCAAAATCCCCAGTGTCGTCACAGGTACTGACATTG...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGGAACCTGAGGTTTTCTaGACTGAATTCGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVEEPEVF*TEFGLQ
Trigger: CTGGAGTCCGAATTCAGTTCAGAAAACCTCAGGTTC...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GCACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTATCCTGGTAAGCATTTaGCCGGAGGAAGCGGGCATA +
Preference number: 4 (lower is better)
Translates to: ARIRIPPPLLLQKITRLGILVSI*PEEAGI
Trigger: TATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGAT...ACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR TCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCCTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGG +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSLSPSQ*PSLLVR
Trigger: CCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAG...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACAAGGGTGGAAAGACCTTaGGGCGGGGCAATCCGTGAG +
Preference number: 4 (lower is better)
Translates to: YIHYLTARLANGHFDTHTRVERP*GGAIRE
Trigger: CTCACGGATTGCCCCGCCTCAAGGTCTTTCCACCCT...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGGCAAATGGTCATTTTaGCACACACACACAGGGAAT +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSGKWSF*HTHTGN
Trigger: ATTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGTGCGTATCAGGCACCTaGCTCGGTGCTTTACATACA +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRCVSGT*LGALHT
Trigger: TGTATGTAAAGCACCGAGTCAGGTGCCTGATACGCA...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACACTGCCTCTGAGACACTaGGGACTCAACATCTGTCAT +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTLPLRH*GLNICH
Trigger: ATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAG...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGAAGAATTGCTGCCTCTaGGACACTGAGGACTCAACA +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVEKNCCL*DTEDST
Trigger: TGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTT...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAGCAAAGCTTCTGGCTTaGTCTACTGGGGAACATGAG +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTAKLLA*STGEHE
Trigger: CTCATGTTCCCCAGTAGATCAAGCCAGAAGCTTTGC...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGTTGGTGAGGTAGTTTaGAATCCCAGGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVVGEVV*NPRNPA
Trigger: GGCAGGATTCCTGGGATTTCAAACTACCTCACCAAC...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACTCCGTGATCATGCGGTaGGTGGGCTTAGAGTATAGA +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYSVIMR*VGLEYR
Trigger: TCTATACTCTAAGCCCACTCACCGCATGATCACGGA...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGAAGCAACGTCATCGCTaGTCCAAGGGTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQKQRHR*SKGWMA
Trigger: AGCCATCCAACCCTTGGATCAGCGATGACGTTGCTT...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGACCAAAGAATTGCCTTaGCTCTCCCTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQTKELP*LSLWLQ
Trigger: CTGGAGCCAGAGGGAGAGTCAAGGCAATTCTTTGGT...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS-3UTR GCA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCGTCAATCTTTACTTGTaGTTCTGCTTGCATAAAGAT +
Preference number: 4 (lower is better)
Translates to: VTKSPRKETLSADVERRRVNLYL*FCLHKD
Trigger: ATCTTTATGCAAGCAGAAGCACAAGTAAAGATTGAC...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGGTCAATCTTTACTTGTaGTTCTGCTTGCATAAAGAT +
Preference number: 4 (lower is better)
Translates to: TKSPRKETLSADVERRRLVNLYL*FCLHKD
Trigger: ATCTTTATGCAAGCAGAAGCACAAGTAAAGATTGAC...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCATGCACCGGGCTCTGTaGCTGGGACTCTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: NSPTTFAAEDYKVGLSVVMHRAL*LGLFSH
Trigger: GTGACTGAAGAGTCCCAGGCACAGAGCCCGGTGCAT...GACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp TGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTGGTTGGCTGAGTACATaGACCGGGCTCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CRRLQGWVKCCLGCSISIGWLST*TGLCAW
Trigger: CCAGGCACAGAGCCCGGTGCATGTACTCAGCCAACC...AATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp AGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCATGTCTGTCGATCTGTaGGTTCAAAAATGTTATCTG +
Preference number: 4 (lower is better)
Translates to: RAMYEGVGLLQRSPSIGIMSVDL*VQKCYL
Trigger: CAGATAACATTTTTGAACGCACAGATCGACAGACAT...GATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR GCA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTATGTCTGTCGATCTGTaGGTTCAAAAATGTTATCTG +
Preference number: 4 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLMSVDL*VQKCYL
Trigger: CAGATAACATTTTTGAACGCACAGATCGACAGACAT...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGGGAGCCAGAAACTCTTaGCAGATTTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNEGARNS*QISSTL
Trigger: GAGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCC...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGGGAGCCAGAAACTCTTaGCAGATTTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVEGARNS*QISSTL
Trigger: GAGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCC...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCACCATCGCCCTTCATTaGCCTCACTCTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSTIALH*PHSFSF
Trigger: GAAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGT...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGACCATCGCCCTTCATTaGCCTCACTCTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRTIALH*PHSFSF
Trigger: GAAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGT...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTTGCAAATGCTGGATGTaGTCTCGGTCCACTCATGCC +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSCKCWM*SRSTHA
Trigger: GGCATGAGTGGACCGAGAGCACATCCAGCATTTGCA...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGTGCAAATGCTGGATGTaGTCTCGGTCCACTCATGCC +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKCKCWM*SRSTHA
Trigger: GGCATGAGTGGACCGAGAGCACATCCAGCATTTGCA...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGTGTAACTATGGGAGGTaGCAGGGAGGTGATGCAAAT +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVECNYGR*QGGDAN
Trigger: ATTTGCATCACCTCCCTGGCACCTCCCATAGTTACA...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACATGTCATCTACAACAGTaGTTCCTCGAACGCTGGACC +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTCHLQQ*FLERWT
Trigger: GGTCCAGCGTTCGAGGAAGCACTGTTGTAGATGACA...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCAGGCACCTGACTCGGTaGTTTACATACATTACCTCA +
Preference number: 4 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCRHLTR*FTYITS
Trigger: TGAGGTAATGTATGTAAAGCACCGAGTCAGGTGCCT...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGAGCTGGCGAATTTGGCTaGATGAGAAAAGAAATACCA +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRAGEFG*MRKEIP
Trigger: TGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGC...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGCAAGAGAGGAACCATTaGCAGTGGGGGAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKQERNH*QWGKLG
Trigger: CCCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTG...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGCTGAGGGCACTGAGGTaGCTGCTGCTTGGGAACACC +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLLRALR*LLLGNT
Trigger: GGTGTTCCCAAGCAGCAGGCACCTCAGTGCCCTCAG...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTTCCCTAGCTCCGTTGTaGTTACTGACCCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KNSQGYNITKTPNARDGTSLAPL*LLTLPS
Trigger: AGAGGGGAGGGTCAGTAAGCACAACGGAGCTAGGGA...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCATGCATGACCAAGTTCTaGGTGGTAGATGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSACMTKF*VVDGPW
Trigger: CCAAGGTCCATCTACCACGCAGAACTTGGTCATGCA...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGGTTATTTTAGTCAGATaGCAGTGCCTGGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQVILVR*QCLVPC
Trigger: ACAAGGCACCAGGCACTGGCATCTGACTAAAATAAC...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTTCAGGCCATCTGGCTaGGGCTGGACGTTTATATGT +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVFRPSG*GWTFIC
Trigger: ACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGTTCAGGCCATCTGGCTaGGGCTGGACGTTTATATGT +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRFRPSG*GWTFIC
Trigger: ACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAA...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTCAGCTAGTCCAAGCTaGAACTCAGAGTCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVSASPS*NSESQE
Trigger: CTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACATCAGCTAGTCCAAGCTaGAACTCAGAGTCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTSASPS*NSESQE
Trigger: CTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGA...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTGCAGAACAGGAGGGATaGATTTTAGGAAAAACATCA +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALAEQEG*ILGKTS
Trigger: TGATGTTTTTCCTAAAATGCATCCCTCCTGTTCTGC...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTGCAGAACAGGAGGGATaGATTTTAGGAAAAACATCA +
Preference number: 4 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPAEQEG*ILGKTS
Trigger: TGATGTTTTTCCTAAAATGCATCCCTCCTGTTCTGC...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCTTATCCCATGGTCTTTaGTACATATTCAACTTGGGC +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRLSHGL*YIFNLG
Trigger: GCCCAAGTTGAATATGTAGCAAAGACCATGGGATAA...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGTTATCCCATGGTCTTTaGTACATATTCAACTTGGGC +
Preference number: 4 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLLSHGL*YIFNLG
Trigger: GCCCAAGTTGAATATGTAGCAAAGACCATGGGATAA...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGCTGGCATCTGCTGTTaGTATGGTTACACGAGCACA +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAAGICC*YGYTST
Trigger: TGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGC...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGGCTGGCATCTGCTGTTaGTATGGTTACACGAGCACA +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGAGICC*YGYTST
Trigger: TGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGC...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCACCCGGGCCCTTTATTaGTACATTTGCTACTTTGCT +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVTRALY*YICYFA
Trigger: AGCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGT...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAGTTGGCTGGGCTCTTTaGTCATCTCTATGTCCCACA +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTVGWAL*SSLCPT
Trigger: TGTGGGACATAGAGATGAGCAAAGAGCCCAGCCAAC...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCGTGTATTGCTTCAACTaGGTCCTCAATGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPVYCFN*VLNGKV
Trigger: AACCTTTCCATTGAGGACCCAGTTGAAGCAATACAC...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGATCTTACAGAGATAGATaGCATAGTCAGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGSYRDR*HSQCFQ
Trigger: CTGAAAACACTGACTATGCCATCTATCTCTGTAAGA...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGCCTGGCACAGGCCTGTaGACATCCCAAAAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: VSEFPHHFCCRRLQGWVKPGTGL*TSQKAR
Trigger: ACGAGCCTTTTGGGATGTCCACAGGCCTGTGCCAGG...CTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp AGGACAGAGCACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAATGTGTTCACACAGCCTaGCACAGGCCTGTGGACATC +
Preference number: 4 (lower is better)
Translates to: RTEHVSEFPHHFCCRRLQCVHTA*HRPVDI
Trigger: GATGTCCACAGGCCTGTGCCAGGCTGTGTGAACACA...TTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGCTCTGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp TGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTACCGGGCTCTGTGCCTaGGACTCTTCAGTCACGCCA +
Preference number: 4 (lower is better)
Translates to: CRRLQGWVKCCLGCSISITGLCA*DSSVTP
Trigger: TGGCGTGACTGAAGAGTCCCAGGCACAGAGCCCGGT...AATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGTTTTCCTGATTGGTTaGCTGAGTACATGCACCGGG +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVVFLIG*LSTCTG
Trigger: CCCGGTGCATGTACTCAGCCAACCAATCAGGAAAAC...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGATGTTGTTTTCCTGATTaGTTGGCTGAGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRCCFPD*LAEYMH
Trigger: GTGCATGTACTCAGCCAACCAATCAGGAAAACAACA...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGTGTTTCTTAAGATCTTaGACAGCCAGCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQCFLRS*TASQNL
Trigger: CAGGTTCTGGCTGGCTGTCCAAGATCTTAAGAAACA...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGACAGGTTGATTGCACTTaGAGCCCCTGGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRQVDCT*SPWSQK
Trigger: TTTCTGGCTCCAGGGGCTCCAAGTGCAATCAACCTG...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTCAGGTTGATTGCACTTaGAGCCCCTGGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFQVDCT*SPWSQK
Trigger: TTTCTGGCTCCAGGGGCTCCAAGTGCAATCAACCTG...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTCAGGTTGATTGCACTTaGAGCCCCTGGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSQVDCT*SPWSQK
Trigger: TTTCTGGCTCCAGGGGCTCCAAGTGCAATCAACCTG...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGTGGACTCTTTCTTTCTaGTCTCCCCATTCACCCACC +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGWTLSF*SPHSPT
Trigger: GGTGGGTGAATGGGGAGACCAGAAAGAAAGAGTCCA...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCTGGACTCTTTCTTTCTaGTCTCCCCATTCACCCACC +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSWTLSF*SPHSPT
Trigger: GGTGGGTGAATGGGGAGACCAGAAAGAAAGAGTCCA...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGACCAGCCCAGGCTCTGTaGACTCTTTCTTTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRPAQAL*TLSFWS
Trigger: AGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGG...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGAGGGGAGAATCCCAATaGCCCCTGAGTTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLRGESQ*PLSSWP
Trigger: TGGCCATGAACTCAGGGGCCATTGGGATTCTCCCCT...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCCACAGGGAATACAGGTaGATCTTTTGCAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPHREYR*IFCRFL
Trigger: CAAAAACCTGCAAAAGATCCACCTGTATTCCCTGTG...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAGGGGGAGTGAATGTCTaGATTCAAAACAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGGGVNV*IQNRLL
Trigger: AAGTAACCTGTTTTGAATCCAGACATTCACTCCCCC...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGAAGCATCTGAGCCTTTaGTCACCAGCTGGCGAATTT +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVEKHLSL*SPAGEF
Trigger: AAATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTT...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGGTGGGGTGGAAAGATaGGTCACTGGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLGGVER*VTGEHP
Trigger: TGGGTGCTCCCCAGTGACCCATCTTTCCACCCCACC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTAGGAACCATTGCCAGTaGGGGAAACTTGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFRNHCQ*GKLGHG
Trigger: ACCATGCCCAAGTTTCCCCCACTGGCAATGGTTCCT...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACATCCTTGGGCAAGGCTaGGGGCAAATGAACTTAGAC +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYILGQG*GQMNLD
Trigger: GTCTAAGTTCATTTGCCCCCAGCCTTGCCCAAGGAT...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAACAGTCCACCTGGCTCTaGTCAGATCCTCTGGGGATC +
Preference number: 4 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQQSTWL*SDPLGI
Trigger: GATCCCCAGAGGATCTGACCAGAGCCAGGTGGACTG...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTTTCTTGCAAAGCTTCTaGCTTGATCTACTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCFLQSF*LDLLGN
Trigger: GTTCCCCAGTAGATCAAGCCAGAAGCTTTGCAAGAA...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTGTGGTAGATGGACCTTaGATAGGCAGCCTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFVVDGP*IGSLVP
Trigger: TGGAACGAGGCTGCCTATCCAAGGTCCATCTACCAC...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACATGTAGACCAGGCCAATaGGGGACGGGCCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: YIHYLTARLANGHFDTHTCRPGQ*GTGQDQ
Trigger: CTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACA...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCACAGGGAAGAAGCCCCTaGAGCATGTCCCCATGTGTT +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISQGRSP*SMSPCV
Trigger: AACACATGGGGACATGCTCCAGGGGCTTCTTCCCTG...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGCTGGGAAGGCTTTCCTaGTGGTGGTTTTTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVLGRLS*WWFLKH
Trigger: GTGCTTCAAAAACCACCACCAGGAAAGCCTTCCCAG...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACTACTTTGCTACTTTATaGCCCCTGGGTCTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYYFATL*PLGLAQ
Trigger: CTGGGCTAGACCCAGGGGCCATAAAGTAGCAAAGTA...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAAGAGAGGGCCAAGTCCTaGTCATTTGGACCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQERAKS*SFGPCP
Trigger: GGGACAGGGTCCAAATGACCAGGACTTGGCCCTCTC...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTCTGTACCAGCATGTTTaGTTCTGGGGTCCAATCCCC +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFLYQHV*FWGPIP
Trigger: GGGGATTGGACCCCAGAACCAAACATGCTGGTACAG...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTGTTGGATGGCTCAGCTaGTGTTATCAAAGGGTCATA +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCVGWLS*CYQRVI
Trigger: TATGACCCTTTGATAACACCAGCTGAGCCATCCAAC...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGTTACTCGCTGTTGGCTaGGCTCTTTGCTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVELLAVG*ALCSSL
Trigger: TAGAGATGAGCAAAGAGCCCAGCCAACAGCGAGTAA...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
3UTR CAA 72 bp GGGATGCCTTATCACTGGGTGGTACTAATGAGTAGGTaGCTGGCATCTGCTGTTGCTATGGTTACACGAGCA +
Preference number: 4 (lower is better)
Translates to: GMPYHWVVLMSR*LASAVAMVTRA
Trigger: TGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCAGTGATAAGGCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 72 bp TTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATaGCTACATTTGCTACTTTGCTACTTTATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: FGPCPRIDPGPL*LHLLLCYFMAP
Trigger: AGGGGCCATAAAGTAGCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGCAATGTCAGTACCTGTaGCGACACTGGGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQQCQYL*RHWGFW
Trigger: CCAAAATCCCCAGTGTCGTCACAGGTACTGACATTG...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGAACCTGAGGTTTTCTaGACTGAATTCGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAEPEVF*TEFGLQ
Trigger: CTGGAGTCCGAATTCAGTTCAGAAAACCTCAGGTTC...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGTGTGAGAATCCAGGTTaGTTGCACTTGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SPTTFAAEDYKVGLSVVLCENPG*LHLEPL
Trigger: CAGGGGCTCCAAGTGCAATCAACCTGGATTCTCACA...CAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR TCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTTCCCACACTGCGAGTaGACTTTTCTAGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVFPHCE*TFLGKF
Trigger: GAACTTCCCTAGAAAAGTTCACTCGCAGTGTGGGAA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGACTTTCTCCTTCACAGTaGCCAAGTCTCCTCGTAAGG +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRLSPSQ*PSLLVR
Trigger: CCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAG...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGTTTGGACATTTTACGTaGAAGCAGTGCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRFGHFT*KQCLVL
Trigger: CAGCACCAGGCACTGCTTTCACGTAAAATGTCCAAA...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGGAATCCCCGCAGCTGTaGAACAAAAAGCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGESPQL*NKKLCH
Trigger: ATGACAGAGCTTTTTGTTTCACAGCTGCGGGGATTC...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAGAATCCCCGCAGCTGTaGAACAAAAAGCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTESPQL*NKKLCH
Trigger: ATGACAGAGCTTTTTGTTTCACAGCTGCGGGGATTC...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCAATCCCAATGGCCCCTaGGTTCATGGCCATGTTTAT +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSNPNGP*VHGHVY
Trigger: ATAAACATGGCCATGAACTCAGGGGCCATTGGGATT...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAACACACAAAGGAGACCTaGCCCAGCAAGGGTCTCACT +
Preference number: 4 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQHTKET*PSKGLT
Trigger: AGTGAGACCCTTGCTGGGTCAGGTCTCCTTTGTGTG...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGAAGAATTGCTGCCTCTaGGACACTGAGGACTCAACA +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRKNCCL*DTEDST
Trigger: TGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTT...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGGGGGCTTTATGCCATTaGTTTACTCATCAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMGALCH*FTHQVV
Trigger: AACCACTTGATGAGTAAATCAATGGCATAAAGCCCC...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGTTATTGCTCTGGGTTTaGGTCCATCTGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRLLLWV*VHLKSP
Trigger: GGGAGACTTCAGATGGACTCAAACCCAGAGCAATAA...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGTTATTGCTCTGGGTTTaGGTCCATCTGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGLLLWV*VHLKSP
Trigger: GGGAGACTTCAGATGGACTCAAACCCAGAGCAATAA...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGGCAAAGCTTCTGGCTTaGTCTACTGGGGAACATGAG +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKAKLLA*STGEHE
Trigger: CTCATGTTCCCCAGTAGATCAAGCCAGAAGCTTTGC...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTACATCTAATCTAGTCTaGATTTTTGGCTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALTSNLV*IFGCVD
Trigger: GTCTACACAGCCAAAAATTCAGACTAGATTAGATGT...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTTGGGCAGCTCCTTTTTaGGGCTGGTGGTGCATTATC +
Preference number: 4 (lower is better)
Translates to: KNSQGYNITKTPNARDGTWAAPF*GWWCII
Trigger: GATAATGCACCACCAGCCTCAAAAAGGAGCTGCCCA...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACCAGAGGGTCCCATGGTaGGTTATTAGTGATTCGTCT +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYQRVPW*VISDSS
Trigger: AGACGAATCACTAATAACTCACCATGGGACCCTCTG...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCACAGAGGGTCCCATGGTaGGTTATTAGTGATTCGTCT +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAQRVPW*VISDSS
Trigger: AGACGAATCACTAATAACTCACCATGGGACCCTCTG...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTTCCGTGATCATGCGGTaGGTGGGCTTAGAGTATAGA +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFSVIMR*VGLEYR
Trigger: TCTATACTCTAAGCCCACTCACCGCATGATCACGGA...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGATCCTTGAGCCATCCTaGGTGTCTTCACTCACACTG +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQILEPS*VSSLTL
Trigger: CAGTGTGAGTGAAGACACTCAGGATGGCTCAAGGAT...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553530.5
CDS-3UTR TCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGAGAAACCCAGGAACATaGTTTATATGCAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQRNPGT*FICRPA
Trigger: TGCAGGTCTGCATATAAATCATGTTCCTGGGTTTCT...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553530.5
ENST00000554474.5
CDS-3UTR GCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCTTCTTCATAAGCCACTaGACAATGTCAGTACCTGTG +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVFFISH*TMSVPV
Trigger: CACAGGTACTGACATTGTGCAGTGGCTTATGAAGAA...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAGCTCCCCAAGTGTATTaGTTCAACTGGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTAPQVY*FNWVLN
Trigger: ATTGAGGACCCAGTTGAAGCAATACACTTGGGGAGC...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGCTCCCCAAGTGTATTaGTTCAACTGGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVAPQVY*FNWVLN
Trigger: ATTGAGGACCCAGTTGAAGCAATACACTTGGGGAGC...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACGCTCCCCAAGTGTATTaGTTCAACTGGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYAPQVY*FNWVLN
Trigger: ATTGAGGACCCAGTTGAAGCAATACACTTGGGGAGC...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTTGCCAGTTCCAGCCTTaGTTTATTTTGCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCCQFQP*FILHCP
Trigger: AGGACAATGCAAAATAAAGCAAGGCTGGAACTGGCA...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACTTCTGCTTCATAATCTaGCAGTTCCAGCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYFCFII*QFQPCF
Trigger: AAAGCAAGGCTGGAACTGGCAGATTATGAAGCAGAA...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCATGTCTGTCGATCTGTaGGTTCAAAAATGTTATCTG +
Preference number: 4 (lower is better)
Translates to: TVTKSPRKETLSADVERRMSVDL*VQKCYL
Trigger: CAGATAACATTTTTGAACGCACAGATCGACAGACAT...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTGTTGGCTGGGCTCTTTaGTTTCAGCCACTTTGGACA +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFVGWAL*FQPLWT
Trigger: TGTCCAAAGTGGCTGAAAGCAAAGAGCCCAGCCAAC...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343854.10
CDS-3UTR GCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGGAGCCAGAAACTCTTaGCAGATTTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVGARNS*QISSTL
Trigger: GAGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCC...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCCTCTCGGTCCACTCATaGCTCTTGAATTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSLSVHS*LLNLPE
Trigger: TTCTGGCAAATTCAAGAGGCATGAGTGGACCGAGAG...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTGTAACTATGGGAGGTaGCAGGGAGGTGATGCAAAT +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVCNYGR*QGGDAN
Trigger: ATTTGCATCACCTCCCTGGCACCTCCCATAGTTACA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGATGTCATCTACAACAGTaGTTCCTCGAACGCTGGACC +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRCHLQQ*FLERWT
Trigger: GGTCCAGCGTTCGAGGAAGCACTGTTGTAGATGACA...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAAACCGGTTTAGAGGGGTaGTTTGGCTGGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQTGLEG*FGWAFR
Trigger: TCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGT...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGCAAGAGAGGAACCATTaGCAGTGGGGGAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLQERNH*QWGKLG
Trigger: CCCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTG...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGACACCCTTTGCCCTATaGCTAGGGGTCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLTPFAL*LGVSTA
Trigger: GGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGT...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTTGCATGACCAAGTTCTaGGTGGTAGATGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFCMTKF*VVDGPW
Trigger: CCAAGGTCCATCTACCACGCAGAACTTGGTCATGCA...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGTTAGTCAGATGCCAGTaGCTGGTGCCTTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQLVRCQ*LVPCVS
Trigger: AGACACACAAGGCACCAGGCACTGGCATCTGACTAA...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTAGCCCAGAGAGTTCCTaGTGCTTAGTTCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: KNSQGYNITKTPNARDGTSPESS*CLVQAI
Trigger: GATGGCCTGAACTAAGCAGCAGGAACTCTCTGGGCT...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGCCCTCCAATACATTCTaGAGGGCCCAAAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQPSNTF*RAQRKR
Trigger: TCTCTTCCTTTGGGCCCTGCAGAATGTATTGGAGGG...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGCCAGCTCCTGGACCTTaGAGCAACACCTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLPAPGP*SNTSLQ
Trigger: TTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGG...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTGTTGGCTGGGCTCTTTaGTCATCTCTATGTCCCACA +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFVGWAL*SSLCPT
Trigger: TGTGGGACATAGAGATGAGCAAAGAGCCCAGCCAAC...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CAGAGCACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGCAGGCCTTGTGTTCTaGACATTCACACTGCGAGTG +
Preference number: 4 (lower is better)
Translates to: QSTYQNSPTTFAAEDYKVAGLVF*TFTLRV
Trigger: CACTCGCAGTGTGAATGTGCAGAACACAAGGCCTGC...AACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp TTATTTAGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGCACTGCTGCGGTGCTGCTaGTCCCCGGACAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: LFRIMDASEPSSINQDRALLRCC*SPDRTE
Trigger: CTCAGTCCTGTCCGGGGAGCAGCAGCACCGCAGCAG...TGCTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCTAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp ACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTGCAGTGCTGTCGCCTTaGCAGACTCCTGCCATTGGA +
Preference number: 4 (lower is better)
Translates to: TTFAAEDYKVGLSVVLDAAVLSP*QTPAIG
Trigger: TCCAATGGCAGGAGTCTGGCAAGGCGACAGCACTGC...AGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGTGTATTGCTTCAACTaGGTCCTCAATGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSVYCFN*VLNGKV
Trigger: AACCTTTCCATTGAGGACCCAGTTGAAGCAATACAC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTGTTTTCCTGATTGGTTaGCTGAGTACATGCACCGGG +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSVFLIG*LSTCTG
Trigger: CCCGGTGCATGTACTCAGCCAACCAATCAGGAAAAC...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTGTTTTCCTGATTGGTTaGCTGAGTACATGCACCGGG +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFVFLIG*LSTCTG
Trigger: CCCGGTGCATGTACTCAGCCAACCAATCAGGAAAAC...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACTGTTGTTTTCCTGATTaGTTGGCTGAGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYCCFPD*LAEYMH
Trigger: GTGCATGTACTCAGCCAACCAATCAGGAAAACAACA...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGTGTTGTTTTCCTGATTaGTTGGCTGAGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQCCFPD*LAEYMH
Trigger: GTGCATGTACTCAGCCAACCAATCAGGAAAACAACA...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCAGGAATCGTAGAAACTaGTCCCGCCCCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RRLQGWVKCCLGCSISISRNRRN*SRPTWS
Trigger: GGACCAGGTGGGGCGGGACCAGTTTCTACGATTCCT...GGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACTTTCTTCTACCCTCTTaGCCACATCCTGTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYFLLPS*PHPVGV
Trigger: AACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAA...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGTGTAATGTGCCAGGTTGATTGCACTTaGAGCCCCTGGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VGLSVVLDAPSPFPSVMCQVDCT*SPWSQK
Trigger: TTTCTGGCTCCAGGGGCTCCAAGTGCAATCAACCTG...GCACATTACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCATTTCTGGCTTCTTCTTaGCCAGCAGCAAATCCTGGT +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAFLASS*PAANPG
Trigger: ACCAGGATTTGCTGCTGGCCAAGAAGAAGCCAGAAA...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGTGGACTCTTTCTTTCTaGTCTCCCCATTCACCCACC +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKWTLSF*SPHSPT
Trigger: GGTGGGTGAATGGGGAGACCAGAAAGAAAGAGTCCA...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGGGCCTCTTAGCGAGTaGAGTGTTGGAATACAACTG +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRGPLSE*SVGIQL
Trigger: CAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCC...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGATGACAGGCGGCGGTaGGGATGTAGTGGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLDDRRR*GCSGCN
Trigger: GTTACAGCCACTACATCCCCACCGCCGCCTGTCATC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCATTTAGAGGGGTGCTTTaGCTGGGCCTTCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAFRGVL*LGLQIK
Trigger: CTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAA...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCGGGGGAGTGAATGTCTaGATTCAAAACAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVGGVNV*IQNRLL
Trigger: AAGTAACCTGTTTTGAATCCAGACATTCACTCCCCC...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGAAGCATCTGAGCCTTTaGTCACCAGCTGGCGAATTT +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVKHLSL*SPAGEF
Trigger: AAATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTT...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCCCCCATAACTTGGAATaGGGCTTTATGCCATTGATT +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSPHNLE*GFMPLI
Trigger: AATCAATGGCATAAAGCCCCATTCCAAGTTATGGGG...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCCCCATAACTTGGAATaGGGCTTTATGCCATTGATT +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCPHNLE*GFMPLI
Trigger: AATCAATGGCATAAAGCCCCATTCCAAGTTATGGGG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCCCCCATAACTTGGAATaGGGCTTTATGCCATTGATT +
Preference number: 4 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSPHNLE*GFMPLI
Trigger: AATCAATGGCATAAAGCCCCATTCCAAGTTATGGGG...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTCCCCATAACTTGGAATaGGGCTTTATGCCATTGATT +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCPHNLE*GFMPLI
Trigger: AATCAATGGCATAAAGCCCCATTCCAAGTTATGGGG...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCCCCCATAACTTGGAATaGGGCTTTATGCCATTGATT +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVPHNLE*GFMPLI
Trigger: AATCAATGGCATAAAGCCCCATTCCAAGTTATGGGG...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGGTGGTAGATGGACCTTaGATAGGCAGCCTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLVVDGP*IGSLVP
Trigger: TGGAACGAGGCTGCCTATCCAAGGTCCATCTACCAC...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGCTGCCAAGATGTGGCTaGAGAGCACTTTTCCTCATA +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRLPRCG*RALFLI
Trigger: TATGAGGAAAAGTGCTCTCCAGCCACATCTTGGCAG...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACCTGCCAAGATGTGGCTaGAGAGCACTTTTCCTCATA +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYLPRCG*RALFLI
Trigger: TATGAGGAAAAGTGCTCTCCAGCCACATCTTGGCAG...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGTTAGTTCAGGCCATCTaGCTGCGGCTGGACGTTTAT +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQLVQAI*LRLDVY
Trigger: ATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGTTAGTTCAGGCCATCTaGCTGCGGCTGGACGTTTAT +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKLVQAI*LRLDVY
Trigger: ATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCAGGCTTTCCTGGTGGTaGTTTTTGAAGCACATGTAT +
Preference number: 4 (lower is better)
Translates to: HVPMCSASPSCNSESQEVRLSWW*FLKHMY
Trigger: ATACATGTGCTTCAAAAACCACCACCAGGAAAGCCT...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTAGGCTTTCCTGGTGGTaGTTTTTGAAGCACATGTAT +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCRLSWW*FLKHMY
Trigger: ATACATGTGCTTCAAAAACCACCACCAGGAAAGCCT...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACGGAAGGCTTTCCTGGTaGTGGTTTTTGAAGCACATG +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYGRLSW*WFLKHM
Trigger: CATGTGCTTCAAAAACCACCACCAGGAAAGCCTTCC...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGCTGGGAAGGCTTTCCTaGTGGTGGTTTTTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQLGRLS*WWFLKH
Trigger: GTGCTTCAAAAACCACCACCAGGAAAGCCTTCCCAG...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAAGAGTTTCCCAGCTCCTaGACCTTGCAGCAACACCTC +
Preference number: 4 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQEFPSS*TLQQHL
Trigger: GAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTC...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGCATCTGCTGTTGCTATaGTTACACGAGCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKHLLLL*LHEHRP
Trigger: AGGCCTGTGCTCGTGTAACCATAGCAACAGCAGATG...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTTACTTTGCTACTTTATaGCCCCTGGGTCTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFYFATL*PLGLAQ
Trigger: CTGGGCTAGACCCAGGGGCCATAAAGTAGCAAAGTA...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGATACTTTGCTACTTTATaGCCCCTGGGTCTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRYFATL*PLGLAQ
Trigger: CTGGGCTAGACCCAGGGGCCATAAAGTAGCAAAGTA...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTCTGTACCAGCATGTTTaGTTCTGGGGTCCAATCCCC +
Preference number: 4 (lower is better)
Translates to: KNSQGYNITKTPNARDGTLYQHV*FWGPIP
Trigger: GGGGATTGGACCCCAGAACCAAACATGCTGGTACAG...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGGTTGGATGGCTCAGCTaGTGTTATCAAAGGGTCATA +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVEVGWLS*CYQRVI
Trigger: TATGACCCTTTGATAACACCAGCTGAGCCATCCAAC...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGATCCAAGGGTTGGATaGCTCAGCTGGTGTTATCAA +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRDPRVG*LSWCYQ
Trigger: TTGATAACACCAGCTGAGCCATCCAACCCTTGGATC...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGATCCAAGGGTTGGATaGCTCAGCTGGTGTTATCAA +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSDPRVG*LSWCYQ
Trigger: TTGATAACACCAGCTGAGCCATCCAACCCTTGGATC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCCTTTTTACTCGCTGTTaGCTGGGCTCTTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSLFTRC*LGSLLI
Trigger: GATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAG...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTTTCCCACACTGCGAGTaGACTTTTCTAGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSFPHCE*TFLGKF
Trigger: GAACTTCCCTAGAAAAGTTCACTCGCAGTGTGGGAA...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000622468.4
CDS-3UTR TCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAGCGAATTTGGCTGCATaGGAAAAGAAATACCAGCGA +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTANLAA*EKKYQR
Trigger: TCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGC...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCACTGCCTCTGAGACACTaGGGACTCAACATCTGTCAT +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISLPLRH*GLNICH
Trigger: ATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAG...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGTCAGCGTCCTGTTGGTaGGGTAGTTTGAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLSASCW*GSLKSQ
Trigger: CTGGGATTTCAAACTACCTCACCAACAGGACGCTGA...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCATCAGCGTCCTGTTGGTaGGGTAGTTTGAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISSASCW*GSLKSQ
Trigger: CTGGGATTTCAAACTACCTCACCAACAGGACGCTGA...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGACCTGGTGGTGGTTTTTaGAGCACATGTATATGGAGC +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRPGGGF*STCIWS
Trigger: GCTCCATATACATGTGCTTCAAAAACCACCACCAGG...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGACAGAGGGTCCCATGGTaGGTTATTAGTGATTCGTCT +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRQRVPW*VISDSS
Trigger: AGACGAATCACTAATAACTCACCATGGGACCCTCTG...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTCAGGCCATCATGGAGTaGAGGAAGTCCCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: CRRLQGWVKCCLGCSISIQAIME*RKSQKP
Trigger: AGGCTTCTGGGACTTCCTTCACTCCATGATGGCCTG...AATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGTTCTTCATAAGCCACTaGACAATGTCAGTACCTGTG +
Preference number: 4 (lower is better)
Translates to: SFTVTKSPRKETLSADVEFFISH*TMSVPV
Trigger: CACAGGTACTGACATTGTGCAGTGGCTTATGAAGAA...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGCATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGTCAATCTTTACTTGTaGTTCTGCTTGCATAAAGAT +
Preference number: 4 (lower is better)
Translates to: GIRAMYEGVGLLQRSPSIVNLYL*FCLHKD
Trigger: ATCTTTATGCAAGCAGAAGCACAAGTAAAGATTGAC...AATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR GCA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATATGTCTGTCGATCTGTaGGTTCAAAAATGTTATCTG +
Preference number: 4 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHMSVDL*VQKCYL
Trigger: CAGATAACATTTTTGAACGCACAGATCGACAGACAT...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GCACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTGGAGCCAGAAACTCTTaGCAGATTTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: ARIRIPPPLLLQKITRLGGARNS*QISSTL
Trigger: GAGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCC...ACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTGGAGCCAGAAACTCTTaGCAGATTTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSGARNS*QISSTL
Trigger: GAGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCC...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGCTTCGTAGCATACTCTaGCCCAGCTTCACACACAAA +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKLRSIL*PSFTHK
Trigger: TTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAG...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTTCTGTGCTGAGCATGTaGAGGTGTCCAGCAAGAATT +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFSVLSM*RCPARI
Trigger: AATTCTTGCTGGACACCTGCACATGCTCAGCACAGA...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCTTTTCCAAATGTACTTaGATGACCAAGTTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCFSKCT*MTKFCV
Trigger: CACGCAGAACTTGGTCATGCAAGTACATTTGGAAAA...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTTTCAGGCCATCTGGCTaGGGCTGGACGTTTATATGT +
Preference number: 4 (lower is better)
Translates to: KNSQGYNITKTPNARDGTFRPSG*GWTFIC
Trigger: ACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAA...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGCAGAACAGGAGGGATaGATTTTAGGAAAAACATCA +
Preference number: 4 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSAEQEG*ILGKTS
Trigger: TGATGTTTTTCCTAAAATGCATCCCTCCTGTTCTGC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGACCCGGGCCCTTTATTaGTACATTTGCTACTTTGCT +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVTRALY*YICYFA
Trigger: AGCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGT...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACCTAAAGAGAACCACATaGACTAAGAGGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYLKRTT*TKRRPF
Trigger: GAATGGCCTCCTCTTAGTGCATGTGGTTCTCTTTAG...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGGACAGAGCACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGTTGGCTGGGCTCTTTaGTCATCTCTATGTCCCACA +
Preference number: 4 (lower is better)
Translates to: RTEHVSEFPHHFCCRRLQVGWAL*SSLCPT
Trigger: TGTGGGACATAGAGATGAGCAAAGAGCCCAGCCAAC...TTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGCTCTGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCAGTTGGCTGGGCTCTTTaGTCATCTCTATGTCCCACA +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISVGWAL*SSLCPT
Trigger: TGTGGGACATAGAGATGAGCAAAGAGCCCAGCCAAC...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTACTCCTGCCATTGGATaGTCTTTCTCTGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: CRRLQGWVKCCLGCSISITPAIG*SFSGPL
Trigger: GAGGGGGCCAGAGAAAGAGCATCCAATGGCAGGAGT...AATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGGTTTTCCTGATTGGTTaGCTGAGTACATGCACCGGG +
Preference number: 4 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLVFLIG*LSTCTG
Trigger: CCCGGTGCATGTACTCAGCCAACCAATCAGGAAAAC...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCACTTTTTACTCGCTGTTaGCTGGGCTCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSALFTRC*LGSLLS
Trigger: TGAAAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAG...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343854.10
CDS-3UTR CCA 90 bp AGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCTGGTCCCGCCCCACCTaGTCCTTCAATATCTCATCG +
Preference number: 4 (lower is better)
Translates to: RRLQGWVKCCLGCSISISWSRPT*SFNISS
Trigger: CGATGAGATATTGAAGGACCAGGTGGGGCGGGACCA...GGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACATGGTCCCGCCCCACCTaGTCCTTCAATATCTCATCG +
Preference number: 4 (lower is better)
Translates to: YIHYLTARLANGHFDTHTWSRPT*SFNISS
Trigger: CGATGAGATATTGAAGGACCAGGTGGGGCGGGACCA...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACTGTTTCTTAAGATCTTaGACAGCCAGCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYCFLRS*TASQNL
Trigger: CAGGTTCTGGCTGGCTGTCCAAGATCTTAAGAAACA...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGTTTCTTCTACCCTCTTaGCCACATCCTGTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKFLLPS*PHPVGV
Trigger: AACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAA...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAACAGGTTGATTGCACTTaGAGCCCCTGGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQQVDCT*SPWSQK
Trigger: TTTCTGGCTCCAGGGGCTCCAAGTGCAATCAACCTG...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGCTGAAGATGTGATTTaGACATTTTACGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSAEDVI*TFYVKA
Trigger: TGCTTTCACGTAAAATGTCCAAATCACATCTTCAGC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACAAGGGGAGAATCCCAATaGCCCCTGAGTTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: YIHYLTARLANGHFDTHTRGESQ*PLSSWP
Trigger: TGGCCATGAACTCAGGGGCCATTGGGATTCTCCCCT...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGGTAGTCATAGCAAGTaGGGGAGTGAATGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRGSHSK*GSECLD
Trigger: ATCCAGACATTCACTCCCCCACTTGCTATGACTACC...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTGATTTACTCATCAAGTaGTTAGTGCCTCCAAAGTAC +
Preference number: 4 (lower is better)
Translates to: GCGWTFICASLQAFLFPCDLLIK*LVPPKY
Trigger: GTACTTTGGAGGCACTAACCACTTGATGAGTAAATC...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACGATTTACTCATCAAGTaGTTAGTGCCTCCAAAGTAC +
Preference number: 4 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYDLLIK*LVPPKY
Trigger: GTACTTTGGAGGCACTAACCACTTGATGAGTAAATC...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGTTCTTGCAAAGCTTCTaGCTTGATCTACTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGFLQSF*LDLLGN
Trigger: GTTCCCCAGTAGATCAAGCCAGAAGCTTTGCAAGAA...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACAGGGGCTGCCAAGATGTaGCTGGAGAGCACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: YIHYLTARLANGHFDTHTGAAKM*LESTFP
Trigger: AGGAAAAGTGCTCTCCAGCCACATCTTGGCAGCCCC...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGAGTTTCCCAGCTCCTaGACCTTGCAGCAACACCTC +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLEFPSS*TLQQHL
Trigger: GAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTGGGATGCCTTATCACTaGGTGGTACTAATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFGMPYH*VVLMSR
Trigger: CCTACTCATTAGTACCACCCAGTGATAAGGCATCCC...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTGGGATGCCTTATCACTaGGTGGTACTAATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSGMPYH*VVLMSR
Trigger: CCTACTCATTAGTACCACCCAGTGATAAGGCATCCC...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACGTAAACGATCATGTTTaGAGAACTCTCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYVNDHV*RTLLWV
Trigger: GACCCAGAGGAGAGTTCTCCAAACATGATCGTTTAC...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
CDS-3UTR CCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGTAAACGATCATGTTTaGAGAACTCTCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAVNDHV*RTLLWV
Trigger: GACCCAGAGGAGAGTTCTCCAAACATGATCGTTTAC...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
CDS-3UTR CCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGGATCCAAGGGTTGGATaGCTCAGCTGGTGTTATCAA +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKDPRVG*LSWCYQ
Trigger: TTGATAACACCAGCTGAGCCATCCAACCCTTGGATC...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGTGTAATGTGCTCTCTCAGGCCATCATaGAGTGAAGGAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VGLSVVLDAPSPFPSVMCSLRPS*SEGSPR
Trigger: TCTGGGACTTCCTTCACTCCATGATGGCCTGAGAGA...GCACATTACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR TCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACAGACCTCTCCGAACGCTaGTCTCAAAGAGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: YIHYLTARLANGHFDTHTDLSER*SQRGWK
Trigger: TTTCCACCCTCTTTGAGATCAGCGTTCGGAGAGGTC...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCAGAATCCCCGCAGCTGTaGAACAAAAAGCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISESPQL*NKKLCH
Trigger: ATGACAGAGCTTTTTGTTTCACAGCTGCGGGGATTC...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAATGCGTATCAGGCACCTaGCTCGGTGCTTTACATACA +
Preference number: 4 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQCVSGT*LGALHT
Trigger: TGTATGTAAAGCACCGAGTCAGGTGCCTGATACGCA...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGGCGAATTTGGCTGCATaGGAAAAGAAATACCAGCGA +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKANLAA*EKKYQR
Trigger: TCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGC...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGGGGCTTTATGCCATTaGTTTACTCATCAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVGALCH*FTHQVV
Trigger: AACCACTTGATGAGTAAATCAATGGCATAAAGCCCC...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGAGCTGTGGGGTGGTGTaGGAGTATTATTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLSCGVV*EYYCSG
Trigger: CCCAGAGCAATAATACTCTCACACCACCCCACAGCT...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAAACATCTAATCTAGTCTaGATTTTTGGCTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQTSNLV*IFGCVD
Trigger: GTCTACACAGCCAAAAATTCAGACTAGATTAGATGT...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACATGGGCAGCTCCTTTTTaGGGCTGGTGGTGCATTATC +
Preference number: 4 (lower is better)
Translates to: YIHYLTARLANGHFDTHTWAAPF*GWWCII
Trigger: GATAATGCACCACCAGCCTCAAAAAGGAGCTGCCCA...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAGAAACCCAGGAACATaGTTTATATGCAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTRNPGT*FICRPA
Trigger: TGCAGGTCTGCATATAAATCATGTTCCTGGGTTTCT...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553530.5
ENST00000554474.5
CDS-3UTR GCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGTGCCAGTTCCAGCCTTaGTTTATTTTGCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRCQFQP*FILHCP
Trigger: AGGACAATGCAAAATAAAGCAAGGCTGGAACTGGCA...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTTCTGCTTCATAATCTaGCAGTTCCAGCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVFCFII*QFQPCF
Trigger: AAAGCAAGGCTGGAACTGGCAGATTATGAAGCAGAA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTATGTCTGTCGATCTGTaGGTTCAAAAATGTTATCTG +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCMSVDL*VQKCYL
Trigger: CAGATAACATTTTTGAACGCACAGATCGACAGACAT...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGTACAGGTGGATCTTTTaGAGGTTTTTGCATTTCCCC +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGYRWIF*RFLHFP
Trigger: GGGGAAATGCAAAAACCTGCAAAAGATCCACCTGTA...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTAGGCACCTGACTCGGTaGTTTACATACATTACCTCA +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFRHLTR*FTYITS
Trigger: TGAGGTAATGTATGTAAAGCACCGAGTCAGGTGCCT...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGTTTTCCAAATGTACTTaGATGACCAAGTTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNEFSKCT*MTKFCV
Trigger: CACGCAGAACTTGGTCATGCAAGTACATTTGGAAAA...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGTTATTTTAGTCAGATaGCAGTGCCTGGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRVILVR*QCLVPC
Trigger: ACAAGGCACCAGGCACTGGCATCTGACTAAAATAAC...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGCTAAAGAGAACCACATaGACTAAGAGGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQLKRTT*TKRRPF
Trigger: GAATGGCCTCCTCTTAGTGCATGTGGTTCTCTTTAG...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGAAGTTCTACGACCTTaGTCACTTTCTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSEVLRP*SLSSSW
Trigger: CCAAGAAGAAGAAAGTGAGCAAGGTCGTAGAACTTC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR CCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTCTCGCAAAGGCCCTCTaGAGTCTTGCTAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KNSQGYNITKTPNARDGTLAKAL*SLAKFS
Trigger: AGAAAACTTAGCAAGACTCCAGAGGGCCTTTGCGAG...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCACTCGCAAAGGCCCTCTaGAGTCTTGCTAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISLAKAL*SLAKFS
Trigger: AGAAAACTTAGCAAGACTCCAGAGGGCCTTTGCGAG...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTGTTGTTTTCCTGATTaGTTGGCTGAGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVCCFPD*LAEYMH
Trigger: GTGCATGTACTCAGCCAACCAATCAGGAAAACAACA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGTGTAATGTGTTTCTGGCTTCTTCTTaGCCAGCAGCAAATCCTGGT +
Preference number: 4 (lower is better)
Translates to: GWVKCCLGCSISISQCNVFLASS*PAANPG
Trigger: ACCAGGATTTGCTGCTGGCCAAGAAGAAGCCAGAAA...CACATTACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTGCTGAAGATGTGATTTaGACATTTTACGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCAEDVI*TFYVKA
Trigger: TGCTTTCACGTAAAATGTCCAAATCACATCTTCAGC...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACACACAGGGAATACAGGTaGATCTTTTGCAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTHREYR*IFCRFL
Trigger: CAAAAACCTGCAAAAGATCCACCTGTATTCCCTGTG...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTGGTAGTCATAGCAAGTaGGGGAGTGAATGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: KNSQGYNITKTPNARDGTGSHSK*GSECLD
Trigger: ATCCAGACATTCACTCCCCCACTTGCTATGACTACC...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGAAAGACCCCATAACTTaGAATGGGGCTTTATGCCAT +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGKDPIT*NGALCH
Trigger: ATGGCATAAAGCCCCATTCCAAGTTATGGGGTCTTT...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAAATCCTTGGGCAAGGCTaGGGGCAAATGAACTTAGAC +
Preference number: 4 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQILGQG*GQMNLD
Trigger: GTCTAAGTTCATTTGCCCCCAGCCTTGCCCAAGGAT...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGTTCTTGCAAAGCTTCTaGCTTGATCTACTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQFLQSF*LDLLGN
Trigger: GTTCCCCAGTAGATCAAGCCAGAAGCTTTGCAAGAA...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGTCTAGTCTGAATTTTTaGCTGTGTAGACCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRSSLNF*LCRPGQ
Trigger: TTGGCCTGGTCTACACAGCCAAAAATTCAGACTAGA...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGTCTAGTCTGAATTTTTaGCTGTGTAGACCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGSSLNF*LCRPGQ
Trigger: TTGGCCTGGTCTACACAGCCAAAAATTCAGACTAGA...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGGTAAACGATCATGTTTaGAGAACTCTCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQVNDHV*RTLLWV
Trigger: GACCCAGAGGAGAGTTCTCCAAACATGATCGTTTAC...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000553530.5
CDS-3UTR CCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGGTTGGATGGCTCAGCTaGTGTTATCAAAGGGTCATA +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKVGWLS*CYQRVI
Trigger: TATGACCCTTTGATAACACCAGCTGAGCCATCCAAC...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATCCAAGGGTTGGATaGCTCAGCTGGTGTTATCAA +
Preference number: 4 (lower is better)
Translates to: SPTTFAAEDYKVGLSVVLDPRVG*LSWCYQ
Trigger: TTGATAACACCAGCTGAGCCATCCAACCCTTGGATC...CAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp ACAGAGCACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTTACTCGCTGTTGGCTaGGCTCTTTGCTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: TEHVSEFPHHFCCRRLQGLLAVG*ALCSSL
Trigger: TAGAGATGAGCAAAGAGCCCAGCCAACAGCGAGTAA...ACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR TCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAAAAGAATTGCTGCCTCTaGGACACTGAGGACTCAACA +
Preference number: 4 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQKNCCL*DTEDST
Trigger: TGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTT...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp TTTAGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGCACGTAAGCAACGTCATCGCTaGTCCAAGGGTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: FRIMDASEPSSINQDRARKQRHR*SKGWMA
Trigger: AGCCATCCAACCCTTGGATCAGCGATGACGTTGCTT...ACGTGCTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR TCA 90 bp GTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGTGTAATGTGCCATTCACACTGCGAGTaGACTTTTCTAGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VGLSVVLDAPSPFPSVMCHSHCE*TFLGKF
Trigger: GAACTTCCCTAGAAAAGTTCACTCGCAGTGTGAATG...GCACATTACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGTGCCAGTTCCAGCCTTaGTTTATTTTGCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKCQFQP*FILHCP
Trigger: AGGACAATGCAAAATAAAGCAAGGCTGGAACTGGCA...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGTTCTGCTTCATAATCTaGCAGTTCCAGCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQFCFII*QFQPCF
Trigger: AAAGCAAGGCTGGAACTGGCAGATTATGAAGCAGAA...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTTTCTGCTTCATAATCTaGCAGTTCCAGCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFFCFII*QFQPCF
Trigger: AAAGCAAGGCTGGAACTGGCAGATTATGAAGCAGAA...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGGTCAATCTTTACTTGTaGTTCTGCTTGCATAAAGAT +
Preference number: 4 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQVNLYL*FCLHKD
Trigger: ATCTTTATGCAAGCAGAAGCACAAGTAAAGATTGAC...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCTGGCGAATTTGGCTaGATGAGAAAAGAAATACCA +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRAGEFG*MRKEIP
Trigger: TGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGC...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGTTAGTCAGATGCCAGTaGCTGGTGCCTTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLLVRCQ*LVPCVS
Trigger: AGACACACAAGGCACCAGGCACTGGCATCTGACTAA...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGTTCAGGCCATCTGGCTaGGGCTGGACGTTTATATGT +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLFRPSG*GWTFIC
Trigger: ACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAA...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTTATCCCATGGTCTTTaGTACATATTCAACTTGGGC +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVLSHGL*YIFNLG
Trigger: GCCCAAGTTGAATATGTAGCAAAGACCATGGGATAA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGTTGGCTGGGCTCTTTaGTCATCTCTATGTCCCACA +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLVGWAL*SSLCPT
Trigger: TGTGGGACATAGAGATGAGCAAAGAGCCCAGCCAAC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCCAGGCTTTCGGTCCTTaGTTGACAGTCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: NSPTTFAAEDYKVGLSVVQAFGP*LTVCLF
Trigger: GAAAAGACAGACTGTCAAGCAAGGACCGAAAGCCTG...GACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp TCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGAAGTGTTGTCTTGGATaGTCCATCTCCATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SPTTFAAEDYKVGLSVVLKCCLG*SISISQ
Trigger: CTGGGAAATGGAGATGGAGCATCCAAGACAACACTT...CAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp TTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGTGTCCCCACCACTTTTGCTaGAGAAGATTACAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LQGWVKCCLGCSISISQCPHHFC*RRLQGW
Trigger: CCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGG...ACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGTCTTACAGAGATAGATaGCATAGTCAGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNESYRDR*HSQCFQ
Trigger: CTGAAAACACTGACTATGCCATCTATCTCTGTAAGA...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTCGCAAAGGCCCTCTaGAGTCTTGCTAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: EFPHHFCCRRLQGWVKCCLAKAL*SLAKFS
Trigger: AGAAAACTTAGCAAGACTCCAGAGGGCCTTTGCGAG...ACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp ACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTGTTTTCCTGATTGGTTaGCTGAGTACATGCACCGGG +
Preference number: 4 (lower is better)
Translates to: TTFAAEDYKVGLSVVLDAVFLIG*LSTCTG
Trigger: CCCGGTGCATGTACTCAGCCAACCAATCAGGAAAAC...AGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTTGTTGTTTTCCTGATTaGTTGGCTGAGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSCCFPD*LAEYMH
Trigger: GTGCATGTACTCAGCCAACCAATCAGGAAAACAACA...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGTTACTCGCTGTTGGCTaGGCTCTTTGCTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLLLAVG*ALCFQP
Trigger: TGGCTGAAAGCAAAGAGCCCAGCCAACAGCGAGTAA...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343854.10
CDS-3UTR CCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCATGTTTCTTAAGATCTTaGACAGCCAGCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISCFLRS*TASQNL
Trigger: CAGGTTCTGGCTGGCTGTCCAAGATCTTAAGAAACA...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAATTTCTTCTACCCTCTTaGCCACATCCTGTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQFLLPS*PHPVGV
Trigger: AACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAA...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGGGCCTCTTAGCGAGTaGAGTGTTGGAATACAACTG +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLGPLSE*SVGIQL
Trigger: CAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACGATTTACTCATCAAGTaGTTAGTGCCTCCAAAGTAC +
Preference number: 4 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYDLLIK*LVPPKY
Trigger: GTACTTTGGAGGCACTAACCACTTGATGAGTAAATC...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAAAAGACCCCATAACTTaGAATGGGGCTTTATGCCAT +
Preference number: 4 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRKDPIT*NGALCH
Trigger: ATGGCATAAAGCCCCATTCCAAGTTATGGGGTCTTT...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAAAGACCCCATAACTTaGAATGGGGCTTTATGCCAT +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKKDPIT*NGALCH
Trigger: ATGGCATAAAGCCCCATTCCAAGTTATGGGGTCTTT...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCATTCTTGCAAAGCTTCTaGCTTGATCTACTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISFLQSF*LDLLGN
Trigger: GTTCCCCAGTAGATCAAGCCAGAAGCTTTGCAAGAA...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGAGGCTTTCCTGGTGGTaGTTTTTGAAGCACATGTAT +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQRLSWW*FLKHMY
Trigger: ATACATGTGCTTCAAAAACCACCACCAGGAAAGCCT...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
3UTR CAA 72 bp GCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTaGGATGCTCCATCTCCATTTCCCAGTGTAATGTGC +
Preference number: 4 (lower is better)
Translates to: AAEDYKVGLSVV*DAPSPFPSVMC
Trigger: GCACATTACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR TCA 90 bp AGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGCACGTATCGAACCTGAGGTTTTCTaGACTGAATTCGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: RIMDASEPSSINQDRARIEPEVF*TEFGLQ
Trigger: CTGGAGTCCGAATTCAGTTCAGAAAACCTCAGGTTC...GATACGTGCTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR TCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACATTCCCACACTGCGAGTaGACTTTTCTAGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: YIHYLTARLANGHFDTHTFPHCE*TFLGKF
Trigger: GAACTTCCCTAGAAAAGTTCACTCGCAGTGTGGGAA...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000622468.4
CDS-3UTR TCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCAGGGGCTTTATGCCATTaGTTTACTCATCAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISGALCH*FTHQVV
Trigger: AACCACTTGATGAGTAAATCAATGGCATAAAGCCCC...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGCCTGGTGGTGGTTTTTaGAGCACATGTATATGGAGC +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLPGGGF*STCIWS
Trigger: GCTCCATATACATGTGCTTCAAAAACCACCACCAGG...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp AGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGCTTTCGGTCCTTGCTTaGCAGTCTGTCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RLQGWVKCCLGCSISISQLSVLA*QSVFSS
Trigger: AGAAGAAAAGACAGACTGTCAAGCAAGGACCGAAAG...CTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGCCTGTCTTGTCATCTTaGATCTTTGTAATGATGTCT +
Preference number: 4 (lower is better)
Translates to: FSFTVTKSPRKETLSADVPVLSS*IFVMMS
Trigger: AGACATCATTACAAAGATGCAAGATGACAAGACAGG...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGCCTGTCTTGTCATCTTaGATCTTTGTAATGATGTCT +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRPVLSS*IFVMMS
Trigger: AGACATCATTACAAAGATGCAAGATGACAAGACAGG...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTGCTCCCCAAGTGTATTaGTTCAACTGGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: TTFAAEDYKVGLSVVLDAAPQVY*FNWVLN
Trigger: ATTGAGGACCCAGTTGAAGCAATACACTTGGGGAGC...AGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGCTCCCCAAGTGTATTaGTTCAACTGGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLAPQVY*FNWVLN
Trigger: ATTGAGGACCCAGTTGAAGCAATACACTTGGGGAGC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGAGCACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGTGCCAGTTCCAGCCTTaGTTTATTTTGCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: RARIRIPPPLLLQKITRLCQFQP*FILHCP
Trigger: AGGACAATGCAAAATAAAGCAAGGCTGGAACTGGCA...CAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGATGTCTGTCGATCTGTaGGTTCAAAAATGTTATCTG +
Preference number: 4 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGMSVDL*VQKCYL
Trigger: CAGATAACATTTTTGAACGCACAGATCGACAGACAT...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGTGTAGAAGTTCTACGACCTTaGTCACTTTCTGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YKVGLSVVLDAPSPFPSVEVLRP*SLSGFF
Trigger: GAAGAAGCCAGAAAGTGAGCAAGGTCGTAGAACTTC...TACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCATACAGGTGGATCTTTTaGAGGTTTTTGCATTTCCCC +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISYRWIF*RFLHFP
Trigger: GGGGAAATGCAAAAACCTGCAAAAGATCCACCTGTA...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTTTTTCCAAATGTACTTaGATGACCAAGTTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSFSKCT*MTKFCV
Trigger: CACGCAGAACTTGGTCATGCAAGTACATTTGGAAAA...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTTTATCCCATGGTCTTTaGTACATATTCAACTTGGGC +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSLSHGL*YIFNLG
Trigger: GCCCAAGTTGAATATGTAGCAAAGACCATGGGATAA...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAAACCCGGGCCCTTTATTaGTACATTTGCTACTTTGCT +
Preference number: 4 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQTRALY*YICYFA
Trigger: AGCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGT...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATTTCCCCCACCACTTTTaGTGCAGAAGATTACAAGGT +
Preference number: 4 (lower is better)
Translates to: PTTFAAEDYKVGLSVVLDFPHHF*CRRLQG
Trigger: ACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAA...ATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCATCTTACAGAGATAGATaGCATAGTCAGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: HSFSFTVTKSPRKETLSASYRDR*HSQCFQ
Trigger: CTGAAAACACTGACTATGCCATCTATCTCTGTAAGA...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CAGAGCACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTTGTTGTTTTCCTGATTaGTTGGCTGAGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: QSTYQNSPTTFAAEDYKVCCFPD*LAEYMH
Trigger: GTGCATGTACTCAGCCAACCAATCAGGAAAACAACA...AACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp AGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGCACGTATCTTTCTTCTACCCTCTTaGCCACATCCTGTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: RIMDASEPSSINQDRARIFLLPS*PHPVGV
Trigger: AACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAA...GATACGTGCTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCTGAAGATGTGATTTaGACATTTTACGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSAEDVI*TFYVKA
Trigger: TGCTTTCACGTAAAATGTCCAAATCACATCTTCAGC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGGGGGGAGTGAATGTCTaGATTCAAAACAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLGGVNV*IQNRLL
Trigger: AAGTAACCTGTTTTGAATCCAGACATTCACTCCCCC...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACAGATCCAAGGGTTGGATaGCTCAGCTGGTGTTATCAA +
Preference number: 4 (lower is better)
Translates to: YIHYLTARLANGHFDTHTDPRVG*LSWCYQ
Trigger: TTGATAACACCAGCTGAGCCATCCAACCCTTGGATC...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGCGAATTTGGCTGCATaGGAAAAGAAATACCAGCGA +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLANLAA*EKKYQR
Trigger: TCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTCCTGTCTTGTCATCTTaGATCTTTGTAATGATGTCT +
Preference number: 4 (lower is better)
Translates to: CPARIAASETLRTQHLSSPVLSS*IFVMMS
Trigger: AGACATCATTACAAAGATGCAAGATGACAAGACAGG...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGTCAATCTTTACTTGTaGTTCTGCTTGCATAAAGAT +
Preference number: 4 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRVNLYL*FCLHKD
Trigger: ATCTTTATGCAAGCAGAAGCACAAGTAAAGATTGAC...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR GCA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGTCAATCTTTACTTGTaGTTCTGCTTGCATAAAGAT +
Preference number: 4 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSVNLYL*FCLHKD
Trigger: ATCTTTATGCAAGCAGAAGCACAAGTAAAGATTGAC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACAGAAGTTCTACGACCTTaGTCACTTTCTGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YIHYLTARLANGHFDTHTEVLRP*SLSGFF
Trigger: GAAGAAGCCAGAAAGTGAGCAAGGTCGTAGAACTTC...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000622468.4
CDS-3UTR GCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGAGGCACCTGACTCGGTaGTTTACATACATTACCTCA +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLRHLTR*FTYITS
Trigger: TGAGGTAATGTATGTAAAGCACCGAGTCAGGTGCCT...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCATTTTCCAAATGTACTTaGATGACCAAGTTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISFSKCT*MTKFCV
Trigger: CACGCAGAACTTGGTCATGCAAGTACATTTGGAAAA...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACACTAAAGAGAACCACATaGACTAAGAGGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: YIHYLTARLANGHFDTHTLKRTT*TKRRPF
Trigger: GAATGGCCTCCTCTTAGTGCATGTGGTTCTCTTTAG...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGTCTTACAGAGATAGATaGCATAGTCAGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQSYRDR*HSQCFQ
Trigger: CTGAAAACACTGACTATGCCATCTATCTCTGTAAGA...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGTCTTACAGAGATAGATaGCATAGTCAGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKSYRDR*HSQCFQ
Trigger: CTGAAAACACTGACTATGCCATCTATCTCTGTAAGA...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCTGTTTCTTAAGATCTTaGACAGCCAGCCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: RRLQGWVKCCLGCSISISCFLRS*TASQNL
Trigger: CAGGTTCTGGCTGGCTGTCCAAGATCTTAAGAAACA...GGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp AGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGCACGTATCGTTGGATGGCTCAGCTaGTGTTATCAAAGGGTCATA +
Preference number: 4 (lower is better)
Translates to: RIMDASEPSSINQDRARIVGWLS*CYQRVI
Trigger: TATGACCCTTTGATAACACCAGCTGAGCCATCCAAC...GATACGTGCTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
3UTR CAA 72 bp ATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTaGCTACATATTCAACTTGGGCAGCTCCTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: IRLATIQLIPWS*LHIQLGQLLFE
Trigger: CTCAAAAAGGAGCTGCCCAAGTTGAATATGTAGCAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR TCA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGACATCTAATCTAGTCTaGATTTTTGGCTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLTSNLV*IFGCVD
Trigger: GTCTACACAGCCAAAAATTCAGACTAGATTAGATGT...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTTTCTGCTTCATAATCTaGCAGTTCCAGCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: YQNSPTTFAAEDYKVGLSFCFII*QFQPCF
Trigger: AAAGCAAGGCTGGAACTGGCAGATTATGAAGCAGAA...ACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGCTGGCGAATTTGGCTaGATGAGAAAAGAAATACCA +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLAGEFG*MRKEIP
Trigger: TGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp TGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTTCTTCATAAGCCACTaGACAATGTCAGTACCTGCA +
Preference number: 4 (lower is better)
Translates to: CRRLQGWVKCCLGCSISIFFISH*TMSVPA
Trigger: TGCAGGTACTGACATTGTGCAGTGGCTTATGAAGAA...AATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp AGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCGTGTATTGCTTCAACTaGGTCCTCAATGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: RRLQGWVKCCLGCSISISVYCFN*VLNGKV
Trigger: AACCTTTCCATTGAGGACCCAGTTGAAGCAATACAC...GGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGGCTGAAGATGTGATTTaGACATTTTACGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLAEDVI*TFYVKA
Trigger: TGCTTTCACGTAAAATGTCCAAATCACATCTTCAGC...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGTCTAGTCTGAATTTTTaGCTGTGTAGACCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLSSLNF*LCRPGQ
Trigger: TTGGCCTGGTCTACACAGCCAAAAATTCAGACTAGA...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AATTATTTAGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGGAGCCACACGGCCATTaGCAAAGCAGCCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: NYLELWMPQNLLVLTRTEEPHGH*QSSHED
Trigger: ATCTTCATGGCTGCTTTGCCAATGGCCGTGTGGCTC...CTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCTAAATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp AGAGCACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGAGAAGATTACAAGGTTaGGTTAAGTGTTGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: RARIRIPPPLLLQKITRLRRLQG*VKCCLG
Trigger: TCCAAGACAACACTTAACCCAACCTTGTAATCTTCT...CAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTGTCAATCTTTACTTGTaGTTCTGCTTGCATAAAGAT +
Preference number: 4 (lower is better)
Translates to: KNSQGYNITKTPNARDGTVNLYL*FCLHKD
Trigger: ATCTTTATGCAAGCAGAAGCACAAGTAAAGATTGAC...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR GCA 90 bp AGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGATGTCTGTCGATCTGTaGGTTCAAAAATGTTATCTG +
Preference number: 4 (lower is better)
Translates to: RLQGWVKCCLGCSISISQMSVDL*VQKCYL
Trigger: CAGATAACATTTTTGAACGCACAGATCGACAGACAT...CTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp TTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGTGTTCTTACAGAGATAGATaGCATAGTCAGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: LQGWVKCCLGCSISISQCSYRDR*HSQCFQ
Trigger: CTGAAAACACTGACTATGCCATCTATCTCTGTAAGA...ACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAATCTTACAGAGATAGATaGCATAGTCAGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQSYRDR*HSQCFQ
Trigger: CTGAAAACACTGACTATGCCATCTATCTCTGTAAGA...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGATTTACTCATCAAGTaGTTAGTGCCTCCAAAGTAC +
Preference number: 4 (lower is better)
Translates to: GELLVIRLATIQLIPWSLDLLIK*LVPPKY
Trigger: GTACTTTGGAGGCACTAACCACTTGATGAGTAAATC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CCA 90 bp AATTATTTAGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGTTGAACTTTCCAGTCTaGACCACAGGCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: NYLELWMPQNLLVLTRTELNFPV*TTGRVG
Trigger: CCCAACTCTGCCTGTGGTCCAGACTGGAAAGTTCAA...CTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCTAAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CCA 90 bp AATTATTTAGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGCTTTTTACTCGCTGTTaGCTGGGCTCTTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: NYLELWMPQNLLVLTRTELFTRC*LGSLLI
Trigger: GATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAG...CTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCTAAATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR GCA 90 bp TTATTTAGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGCAGTCAATCTTTACTTGTaGTTCTGCTTGCATAAAGAT +
Preference number: 4 (lower is better)
Translates to: LFRIMDASEPSSINQDRAVNLYL*FCLHKD
Trigger: ATCTTTATGCAAGCAGAAGCACAAGTAAAGATTGAC...TGCTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCTAAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS GCA 90 bp GCTCCGGGCTGGCCTGGCTCTCCGCGCTCCCAGGCGTTCGCCGCTTaGCCGCCTCTGCCCGCCCCGGTCGGCAAGGGTGCGCGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: APGWPGSPRSQAFAA*PPLPAPVGKGARRS
Trigger: AGACCTCCGCGCACCCTTGCCGACCGGGGCGGGCAGAGGCGGGCAAGCGGCGAACGCCTGGGAGCGCGGAGAGCCAGGCCAGCCCGGAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS GCA 90 bp GGCCTGGCTCTCCGCGCTCCCAGGCGTTCGCCGCTTGCCCGCCTCTaGCCGCCCCGGTCGGCAAGGGTGCGCGGAGGTCTGTCCGTTCCC +
Preference number: 5 (lower is better)
Translates to: GLALRAPRRSPLARL*PPRSARVRGGLSVP
Trigger: GGGAACGGACAGACCTCCGCGCACCCTTGCCGACCGGGGCGGGCAGAGGCGGGCAAGCGGCGAACGCCTGGGAGCGCGGAGAGCCAGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS GCA 90 bp CGCGGGCCCAGGCCCTGGACCTGCGGTAGGAACGGTCAGGAGGACTaGATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCCACA +
Preference number: 5 (lower is better)
Translates to: RGPRPWTCGRNGQED*IRPVRRLPASDFPT
Trigger: TGTGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTTCCTACCGCAGGTCCAGGGCCTGGGCCCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000554300.1
ENST00000556437.5
ENST00000622468.4
CDS GCA 90 bp CGCGGGCCCAGGCCCTGGACCTGCGGTAGGAACGGTCAGGAGGACTaGATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: RGPRPWTCGRNGQED*IRPVRRLPASDFPF
Trigger: GAAGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTTCCTACCGCAGGTCCAGGGCCTGGGCCCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402788.6
ENST00000553530.5
CDS-3UTR CAA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTAGGCCCGTGAGGCGCTaGCCCGCCAGCGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: KSPRKETLSADVERRRLPRPVRR*PASDFP
Trigger: GGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCT...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS TCA 90 bp CCTGGACCTGCGGTAGGAACGGTCAGGAGGACTGCATCAGGCCCGTaGGGCGCTTGCCCGCCAGCGACTTTCCCTTCTTCTTGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: PGPAVGTVRRTASGP*GACPPATFPSSWPA
Trigger: TGCTGGCCAAGAAGAAGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTTCCTACCGCAGGTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402788.6
ENST00000553530.5
CDS-3UTR CAA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAAGGCCCGTGAGGCGCTaGCCCGCCAGCGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGRPVRR*PASDFP
Trigger: GGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCT...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS GCA 90 bp GTGACATTGGCAGTGCTGTCGCCTTGCCAGACTCCTGCCATTGGATaGTCTTTCTCTGGCCCCCTCTGCTGCGGTGCTGCTGCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: VTLAVLSPCQTPAIG*SFSGPLCCGAAAPR
Trigger: CCGGGGAGCAGCAGCACCGCAGCAGAGGGGGCCAGAGAAAGAGCATCCAATGGCAGGAGTCTGGCAAGGCGACAGCACTGCCAATGTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS CCA 90 bp AGTGCTGTCGCCTTGCCAGACTCCTGCCATTGGATGCTCTTTCTCTaGCCCCCTCTGCTGCGGTGCTGCTGCTCCCCGGACAGGACTGAG +
Preference number: 5 (lower is better)
Translates to: SAVALPDSCHWMLFL*PPLLRCCCSPDRTE
Trigger: CTCAGTCCTGTCCGGGGAGCAGCAGCACCGCAGCAGAGGGGGCCAGAGAAAGAGCATCCAATGGCAGGAGTCTGGCAAGGCGACAGCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp GAGGACTGCATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCCCACTGCTCGCTGATCCAAGGGTaGGATGGCTCAGCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: EDCIRPVRRLPASDFPHCSLIQG*DGSAGV
Trigger: AACACCAGCTGAGCCATCCAACCCTTGGATCAGCGA...GCAGTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS CCA 90 bp GACCGTGACATTGGCAGTGCTGTCGCCTTGCCAGACTCCTGCCATTaGATGCTCTTTCTCTGGCCCCCTCTGCTGCGGTGCTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: DRDIGSAVALPDSCH*MLFLWPPLLRCCCS
Trigger: GGAGCAGCAGCACCGCAGCAGAGGGGGCCAGAGAAAGAGCATCCAATGGCAGGAGTCTGGCAAGGCGACAGCACTGCCAATGTCACGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTCGTGGTAGATGGACCTaGGATAGGCAGCCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: PFALCLGVSTARGSLGKARGRWT*DRQPRS
Trigger: GGAACGAGGCTGCCTATCCAAGGTCCATCTACCACG...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCCAGCTCCTGGACCTaGCAGCAACACCTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: TKSPRKETLSADVERRRLPSSWT*QQHLPP
Trigger: TGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGG...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACACTGCCCAACCCCCACTGCTCTTaGATCCCCGGATCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: PLASSSRGIDRRPGSTLPNPHCS*IPGSLS
Trigger: GCTCAAGGATCCGGGGATCAAAGAGCAGTGGGGGTT...GGGCAGTGTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGTCGCTGATCCAAGGGTaGGATGGCTCAGCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: QGSHCACQDATTWGLPALSLIQG*DGSAGV
Trigger: AACACCAGCTGAGCCATCCAACCCTTGGATCAGCGA...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS GCA 90 bp CTCCTTGACCGTGACATTGGCAGTGCTGTCGCCTTGCCAGACTCCTaGCATTGGATGCTCTTTCTCTGGCCCCCTCTGCTGCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: LLDRDIGSAVALPDS*HWMLFLWPPLLRCC
Trigger: GCAGCACCGCAGCAGAGGGGGCCAGAGAAAGAGCATCCAATGGCAGGAGTCTGGCAAGGCGACAGCACTGCCAATGTCACGGTCAAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp GAGGACTGCATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCCCACTGCATTTCTTCTACCCTCTaGGCCACATCCTGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: EDCIRPVRRLPASDFPHCISSTL*ATSCRG
Trigger: ACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAAT...GCAGTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR CAA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCAGGCCCGTGAGGCGCTaGCCCGCCAGCGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: HVPMCSASPSCNSESQEVRPVRR*PASDFP
Trigger: GGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCT...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACAGGCCCGTGAGGCGCTaGCCCGCCAGCGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYRPVRR*PASDFP
Trigger: GGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCT...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CAAGGGTCTCACTGTGCCTGTCAGGATGCCACCACGTGGGGGCTGCCAGCCCTGCAAGCATCTGAGCCTTaGGTCACCAGCTGGCGAATT +
Preference number: 5 (lower is better)
Translates to: QGSHCACQDATTWGLPALQASEP*VTSWRI
Trigger: AATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTTG...CAGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GAGGACTGCATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCCCACTGCTTGGAGAGAAAGCTCTaGACTGTTCTGATGGGCACA +
Preference number: 5 (lower is better)
Translates to: EDCIRPVRRLPASDFPHCLERKL*TVLMGT
Trigger: TGTGCCCATCAGAACAGTCAAGAGCTTTCTCTCCAA...GCAGTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR CAA 90 bp TGCGGTAGGAACGGTCAGGAGGACTGCATCAGGCCCGTGAGGCGCTTGCCCGCCCTGCCAGTTCCAGCCTaGCTTTATTTTGCATTGTCC +
Preference number: 5 (lower is better)
Translates to: CGRNGQEDCIRPVRRLPALPVPA*LYFALS
Trigger: GGACAATGCAAAATAAAGCAAGGCTGGAACTGGCAG...GGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTTCCTACCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR CAA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGAGGCCCGTGAGGCGCTaGCCCGCCAGCGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: SFTVTKSPRKETLSADVERPVRR*PASDFP
Trigger: GGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCT...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTTCGAACGCTGGACCCTaGAGACATGTGACGGGACCT +
Preference number: 5 (lower is better)
Translates to: KSPRKETLSADVERRRLPSNAGP*RHVTGP
Trigger: AGGTCCCGTCACATGTCTCAAGGGTCCAGCGTTCGA...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGTCGAACGCTGGACCCTaGAGACATGTGACGGGACCT +
Preference number: 5 (lower is better)
Translates to: TKSPRKETLSADVERRRLSNAGP*RHVTGP
Trigger: AGGTCCCGTCACATGTCTCAAGGGTCCAGCGTTCGA...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCCCAGCTCCTGGACCTaGCAGCAACACCTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: TVTKSPRKETLSADVERRPSSWT*QQHLPP
Trigger: TGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGG...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGAACCCCCACTGCTCTTaGATCCCCGGATCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: TKSPRKETLSADVERRRLNPHCS*IPGSLS
Trigger: GCTCAAGGATCCGGGGATCAAAGAGCAGTGGGGGTT...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
CDS-3UTR CAA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCTGTTGGCTGGGCTCTTaGCTCATCTCTATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: GTPFALCLGVSTARGSLGCWLGS*LISMSH
Trigger: GTGGGACATAGAGATGAGCAAAGAGCCCAGCCAACA...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCTTGATCCCCGGATCCTaGAGCCATCCTGAGTGTCTT +
Preference number: 5 (lower is better)
Translates to: GTPFALCLGVSTARGSLGLIPGS*SHPECL
Trigger: AAGACACTCAGGATGGCTCAAGGATCCGGGGATCAA...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000553530.5
CDS GCA 90 bp TTGGGTCTCCTCTCCTTGACCGTGACATTGGCAGTGCTGTCGCCTTaGCAGACTCCTGCCATTGGATGCTCTTTCTCTGGCCCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: LGLLSLTVTLAVLSP*QTPAIGCSFSGPLC
Trigger: GCAGAGGGGGCCAGAGAAAGAGCATCCAATGGCAGGAGTCTGGCAAGGCGACAGCACTGCCAATGTCACGGTCAAGGAGAGGAGACCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp GCCCCTCCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACAGAACATGGTCTGAGATaGGAAAGATGTAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: APPLASSSRGIDRRPGSTEHGLR*ERCSPG
Trigger: CCCAGGGCTACATCTTTCCAATCTCAGACCATGTTC...TGTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp ATCAGGCCCGTGAGGCGCTTGCCCGCCAGCGACTTTCCCCACTGCTGGAAGGAAGAACATGGTCTGAGATaGGAAAGATGTAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: IRPVRRLPASDFPHCWKEEHGLR*ERCSPG
Trigger: CCCAGGGCTACATCTTTCCAATCTCAGACCATGTTC...TTCCTTCCAGCAGTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR CAA 90 bp AGCCCCTCCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACATTTCTTCTACCCTCTaGGCCACATCCTGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: SPSIGILQQGNRQEARLHISSTL*ATSCRG
Trigger: ACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAAT...GTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGAGGCCCGTGAGGCGCTaGCCCGCCAGCGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRRPVRR*PASDFP
Trigger: GGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCT...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCGTCCACTCATGCCTCTaGAATTTGCCAGAAGGTGTG +
Preference number: 5 (lower is better)
Translates to: GTPFALCLGVSTARGSLGVHSCL*NLPEGV
Trigger: CACACCTTCTGGCAAATTCAAGAGGCATGAGTGGAC...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCTCGAACGCTGGACCCTaGAGACATGTGACGGGACCT +
Preference number: 5 (lower is better)
Translates to: RNPTTCSPLNELGSGPLSSNAGP*RHVTGP
Trigger: AGGTCCCGTCACATGTCTCAAGGGTCCAGCGTTCGA...GCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACGCCAGTGGGGGAAACTaGGGCATGGTAGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHASGGN*GMVVKN
Trigger: GTTCTTGACTACCATGCCCAAGTTTCCCCCACTGGC...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTGTCTCCCTAGCTCCGTaGTGCTTACTGACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPVSLAP*CLLTLP
Trigger: GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGAC...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCCGTTCCACTCCCTTCTaGCAAAGCTTCTGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSRSTPF*QSFWLD
Trigger: ATCAAGCCAGAAGCTTTGCAAGAAGGGAGTGGAACG...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGACCCAGCTCCTGGACCTaGCAGCAACACCTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGPSSWT*QQHLPP
Trigger: TGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGG...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGCGGTAGGAACGGTCAGGAGGACTGCATCAGGCCCGTGAGGCGCTTGCCCGCCAGTAAACGATCATGTTaGGAGAACTCTCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: CGRNGQEDCIRPVRRLPASKRSC*ENSPLG
Trigger: ACCCAGAGGAGAGTTCTCCAAACATGATCGTTTACT...GGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTTCCTACCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS-3UTR CAA 90 bp TGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTCCAGCAGCCACACCTTCTTCTaGGCCAGCAGCAAATCCTGG +
Preference number: 5 (lower is better)
Translates to: CMRVSASSKGAPPLASSSSHTFF*ASSKSW
Trigger: CCAGGATTTGCTGCTGGCCAAGAAGAAGGTGTGGCT...GCTGGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp ATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCAAAGGAGCCCCTCCATaGGCATCCTCCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: IRAMYEGVGLLQRSPSIGKGAPP*ASSSRG
Trigger: TCCCCTGCTGGAGGATGCCAATGGAGGGGCTCCTTT...GCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS CCA 90 bp TCATGGAGTGAAGGAAGTCCCAGAAGCCTTGACTCTGACAGCCCGTaGCAGCTTCTTGGTGTGCGGAGCCACACGGCCATTGGCAAAGCA +
Preference number: 5 (lower is better)
Translates to: SWSEGSPRSLDSDSP*QLLGVRSHTAIGKA
Trigger: TGCTTTGCCAATGGCCGTGTGGCTCCGCACACCAAGAAGCTGCCACGGGCTGTCAGAGTCAAGGCTTCTGGGACTTCCTTCACTCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp GCCCCTCCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACAAGGCCCTCTGGAGTCTaGCTAAGTTTTCTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: APPLASSSRGIDRRPGSTRPSGV*LSFLLH
Trigger: ATGAAGCAGAAAACTTAGCAAGACTCCAGAGGGCCT...TGTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTAGGCCCTCTGGAGTCTaGCTAAGTTTTCTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: PFALCLGVSTARGSLGKARPSGV*LSFLLH
Trigger: ATGAAGCAGAAAACTTAGCAAGACTCCAGAGGGCCT...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACACTGCCCGGATATCCATTTCTGTaGTGTTCACACAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: PLASSSRGIDRRPGSTLPGYPFL*CSHSLA
Trigger: TGCCAGGCTGTGTGAACACAACAGAAATGGATATCC...GGGCAGTGTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTAGGCCCGTGAGGCGCTaGCCCGCCAGCGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: CPARIAASETLRTQHLSSRPVRR*PASDFP
Trigger: GGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCT...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCACCATCGCCCTTCATaGCCCTCACTCTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: TKSPRKETLSADVERRRLHHRPS*PSLFLL
Trigger: AAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGTG...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCAAGCATCTGAGCCTTaGGTCACCAGCTGGCGAATT +
Preference number: 5 (lower is better)
Translates to: TKSPRKETLSADVERRRLQASEP*VTSWRI
Trigger: AATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTTG...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCAGACATAGACAGGACTaGGAGGTGGTGGGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: VTKSPRKETLSADVERRRRHRQD*EVVGWK
Trigger: TTTCCACCCCACCACCTCCAAGTCCTGTCTATGTCT...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCGTACTAATGAGTAGGTaGCTGGCATCTGCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSVLMSR*LASAVA
Trigger: AGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTACTGTACCAGCATGTTaGGTTCTGGGGTCCAATCCC +
Preference number: 5 (lower is better)
Translates to: KSPRKETLSADVERRRLPTVPAC*VLGSNP
Trigger: GGGATTGGACCCCAGAACCAAACATGCTGGTACAGT...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCTGTTGGCTGGGCTCTTaGCTCATCTCTATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: VTKSPRKETLSADVERRRCWLGS*LISMSH
Trigger: GTGGGACATAGAGATGAGCAAAGAGCCCAGCCAACA...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACTTGATCCCCGGATCCTaGAGCCATCCTGAGTGTCTT +
Preference number: 5 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHLIPGS*SHPECL
Trigger: AAGACACTCAGGATGGCTCAAGGATCCGGGGATCAA...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
CDS-3UTR CAA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTTTGATCCCCGGATCCTaGAGCCATCCTGAGTGTCTT +
Preference number: 5 (lower is better)
Translates to: KSPRKETLSADVERRRLPLIPGS*SHPECL
Trigger: AAGACACTCAGGATGGCTCAAGGATCCGGGGATCAA...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
CDS TCA 90 bp CTCGTCCCCGTCGGTGTGCGCTTCACACCCAGAAACCCAGGAACATaGTTTATATGCAGACCTGCACCCATCCCACACAAGTCCACACGC +
Preference number: 5 (lower is better)
Translates to: LVPVGVRFTPRNPGT*FICRPAPIPHKSTR
Trigger: GCGTGTGGACTTGTGTGGGATGGGTGCAGGTCTGCATATAAATCATGTTCCTGGGTTTCTGGGTGTGAAGCGCACACCGACGGGGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553530.5
ENST00000554474.5
CDS-3UTR CAA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACGGCACACCCCCTGTCTaGTCATCTTGCATCTTTGTA +
Preference number: 5 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHGTPPV*SSCIFV
Trigger: TACAAAGATGCAAGATGACAAGACAGGGGGTGTGCC...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTCCAGCGGCACACCCCCTGTCTaGTCATCTTGCATCTTTGTA +
Preference number: 5 (lower is better)
Translates to: CMRVSASSKGAPPLASSSGTPPV*SSCIFV
Trigger: TACAAAGATGCAAGATGACAAGACAGGGGGTGTGCC...GCTGGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTGTTGGCTGGGCTCTTaGCTTTCAGCCACTTTGGAC +
Preference number: 5 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLCWLGS*LSATLD
Trigger: GTCCAAAGTGGCTGAAAGCAAAGAGCCCAGCCAACA...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343854.10
CDS-3UTR CAA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCACCATCGCCCTTCATaGCCCTCACTCTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFHHRPS*PSLFLL
Trigger: AAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGTG...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACGTCCACTCATGCCTCTaGAATTTGCCAGAAGGTGTG +
Preference number: 5 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHVHSCL*NLPEGV
Trigger: CACACCTTCTGGCAAATTCAAGAGGCATGAGTGGAC...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCTGGCAAATGGTCATTTaGACACACACACACAGGGAA +
Preference number: 5 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSWQMVI*THTHRE
Trigger: TTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCCA...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCGTCTCCCTAGCTCCGTaGTGCTTACTGACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCVSLAP*CLLTLP
Trigger: GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGAC...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCCGTGGTAGATGGACCTaGGATAGGCAGCCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPRGRWT*DRQPRS
Trigger: GGAACGAGGCTGCCTATCCAAGGTCCATCTACCACG...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCTCCTGGTGGTGGTTTTaGAAGCACATGTATATGGAG +
Preference number: 5 (lower is better)
Translates to: GTPFALCLGVSTARGSLGSWWWF*KHMYME
Trigger: CTCCATATACATGTGCTTCAAAAACCACCACCAGGA...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCTGCTACATATTCAACTaGGGCAGCTCCTTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSCYIFN*GSSFLR
Trigger: CCTCAAAAAGGAGCTGCCCAAGTTGAATATGTAGCA...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCAAGGCTTGCTACATATTCAACTaGGGCAGCTCCTTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: PFALCLGVSTARGSLGKACYIFN*GSSFLR
Trigger: CCTCAAAAAGGAGCTGCCCAAGTTGAATATGTAGCA...AGCCTTGCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCGACCCGGGCCCTTTATaGCTACATTTGCTACTTTGC +
Preference number: 5 (lower is better)
Translates to: VTKSPRKETLSADVERRRDPGPL*LHLLLC
Trigger: GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTC...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGGACCCGGGCCCTTTATaGCTACATTTGCTACTTTGC +
Preference number: 5 (lower is better)
Translates to: TKSPRKETLSADVERRRLDPGPL*LHLLLC
Trigger: GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTC...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATAACCCCCACTGCTCTTaGATCCCCGGATCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHNPHCS*IPGSLS
Trigger: GCTCAAGGATCCGGGGATCAAAGAGCAGTGGGGGTT...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000553530.5
CDS-3UTR CAA 90 bp GCATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGTCGCTGATCCAAGGGTaGGATGGCTCAGCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: ALEPCMRVSASSKGAPPLSLIQG*DGSAGV
Trigger: AACACCAGCTGAGCCATCCAACCCTTGGATCAGCGA...CAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTTCGCTGATCCAAGGGTaGGATGGCTCAGCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALSLIQG*DGSAGV
Trigger: AACACCAGCTGAGCCATCCAACCCTTGGATCAGCGA...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCTGTTGGCTGGGCTCTTaGCTCATCTCTATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: RAMYEGVGLLQRSPSIGICWLGS*LISMSH
Trigger: GTGGGACATAGAGATGAGCAAAGAGCCCAGCCAACA...GATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp CTCCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACACTGCTCTTTTTACTCGCTGTaGGCTGGGCTCTTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: LHWHPPAGESTGGQAPHCSFYSL*AGLFAH
Trigger: ATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAGA...GCAGTGTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp GAACAGGGACCCCTGGTATGGAGCAGGGCCTTCCCTCCCCAGACAGCTGACAGCTTCCTAAAGCCAACCTaGCGCCAGGTTCATGATAAA +
Preference number: 5 (lower is better)
Translates to: EQGPLVWSRAFPPQTADSFLKPT*RQVHDK
Trigger: TTTATCATGAACCTGGCGCAAGGTTGGCTTTAGGAA...GCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS CCA 90 bp ATACAGCTAGTCGGCATCTACGTGTCCTCTCAGGACCTTATGGAGTaGGAGAGTCCCACGGCCACCTCTTTCCTCATTTGGTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: IQLVGIYVSSQDLME*ESPTATSFLIWSSS
Trigger: GCTGGAGGACCAAATGAGGAAAGAGGTGGCCGTGGGACTCTCCCACTCCATAAGGTCCTGAGAGGACACGTAGATGCCGACTAGCTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS-3UTR CAA 90 bp GGAACACCCTTTGCCCTATGCCTAGGGGTCAGCACAGCCCGGGGATCCTTGGGCCAGCCTTGCTTTATTTaGCATTGTCCTCTTACAGAG +
Preference number: 5 (lower is better)
Translates to: GTPFALCLGVSTARGSLGQPCFI*HCPLTE
Trigger: CTCTGTAAGAGGACAATGCAAAATAAAGCAAGGCTG...GCCCAAGGATCCCCGGGCTGTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTCTGCCAGTTCCAGCCTaGCTTTATTTTGCATTGTCC +
Preference number: 5 (lower is better)
Translates to: KSPRKETLSADVERRRLPLPVPA*LYFALS
Trigger: GGACAATGCAAAATAAAGCAAGGCTGGAACTGGCAG...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACCTGCCAGTTCCAGCCTaGCTTTATTTTGCATTGTCC +
Preference number: 5 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHLPVPA*LYFALS
Trigger: GGACAATGCAAAATAAAGCAAGGCTGGAACTGGCAG...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCTGCCAGTTCCAGCCTaGCTTTATTTTGCATTGTCC +
Preference number: 5 (lower is better)
Translates to: TKSPRKETLSADVERRRLLPVPA*LYFALS
Trigger: GGACAATGCAAAATAAAGCAAGGCTGGAACTGGCAG...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCAGTTCCAGCCTaGCTTTATTTTGCATTGTCC +
Preference number: 5 (lower is better)
Translates to: VTKSPRKETLSADVERRRLPVPA*LYFALS
Trigger: GGACAATGCAAAATAAAGCAAGGCTGGAACTGGCAG...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GCCCCTCCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACACCGGTCAATCTTTACTaGTGCTTCTGCTTGCATAAA +
Preference number: 5 (lower is better)
Translates to: APPLASSSRGIDRRPGSTPVNLY*CFCLHK
Trigger: TTTATGCAAGCAGAAGCACAAGTAAAGATTGACCGG...TGTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCGGATATCCATTTCTGTaGTGTTCACACAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: VTKSPRKETLSADVERRRGYPFL*CSHSLA
Trigger: TGCCAGGCTGTGTGAACACAACAGAAATGGATATCC...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTATTTCTTCTACCCTCTaGGCCACATCCTGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFISSTL*ATSCRG
Trigger: ACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAAT...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCTGGAGCCAGAAACTCTaGCCAGATTTCTTCTACCCT +
Preference number: 5 (lower is better)
Translates to: VTKSPRKETLSADVERRRWSQKL*PDFFYP
Trigger: AGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCCA...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGCCAGTGGGGGAAACTaGGGCATGGTAGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSASGGN*GMVVKN
Trigger: GTTCTTGACTACCATGCCCAAGTTTCCCCCACTGGC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGACCAAGAGAGGAACCATaGCCAGTGGGGGAAACTTGG +
Preference number: 5 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGPREEP*PVGETW
Trigger: CCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTGG...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTCGTTCCACTCCCTTCTaGCAAAGCTTCTGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLRSTPF*QSFWLD
Trigger: ATCAAGCCAGAAGCTTTGCAAGAAGGGAGTGGAACG...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGACGTTCCACTCCCTTCTaGCAAAGCTTCTGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGRSTPF*QSFWLD
Trigger: ATCAAGCCAGAAGCTTTGCAAGAAGGGAGTGGAACG...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCCGTGGTAGATGGACCTaGGATAGGCAGCCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCRGRWT*DRQPRS
Trigger: GGAACGAGGCTGCCTATCCAAGGTCCATCTACCACG...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACGCTACATTTGCTACTTaGCTACTTTATGGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHATFAT*LLYGPW
Trigger: CCAGGGGCCATAAAGTAGCAAAGTAGCAAATGTAGC...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAAAACCCCCACTGCTCTTaGATCCCCGGATCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQNPHCS*IPGSLS
Trigger: GCTCAAGGATCCGGGGATCAAAGAGCAGTGGGGGTT...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
CDS-3UTR CAA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTTGTTGGCTGGGCTCTTaGCTCATCTCTATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALCWLGS*LISMSH
Trigger: GTGGGACATAGAGATGAGCAAAGAGCCCAGCCAACA...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTTCTTTTTACTCGCTGTaGGCTGGGCTCTTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: KSPRKETLSADVERRRLPSFYSL*AGLFAH
Trigger: ATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAGA...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTAACCAAAGAATTGCCTaGACTCTCCCTCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLNQRIA*TLPLAP
Trigger: TGGAGCCAGAGGGAGAGTCAAGGCAATTCTTTGGTT...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS CCA 90 bp CCACTGCACAATGTCAGTACCTCAGTGATGAATACTTTCTCCCCTTaGTGCTCCACTGATGCTGGGACTAGAGCCGAGCCGTGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: PLHNVSTSVMNTFSP*CSTDAGTRAEPWGF
Trigger: GAAACCCCACGGCTCGGCTCTAGTCCCAGCATCAGTGGAGCACCAAGGGGAGAAAGTATTCATCACTGAGGTACTGACATTGTGCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553690.5
CDS-3UTR CAA 90 bp AGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTGCCAGTTCCAGCCTaGCTTTATTTTGCATTGTCC +
Preference number: 5 (lower is better)
Translates to: RAMYEGVGLLQRSPSIGILPVPA*LYFALS
Trigger: GGACAATGCAAAATAAAGCAAGGCTGGAACTGGCAG...GATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCTGCCAGTTCCAGCCTaGCTTTATTTTGCATTGTCC +
Preference number: 5 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFLPVPA*LYFALS
Trigger: GGACAATGCAAAATAAAGCAAGGCTGGAACTGGCAG...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGAAGGCCCTCTGGAGTCTaGCTAAGTTTTCTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGRPSGV*LSFLLH
Trigger: ATGAAGCAGAAAACTTAGCAAGACTCCAGAGGGCCT...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGCCCCTCCATTGGCATCCTCCAGCAGGGGAATCGACAGGAGGCCAGGCTCCACGGACTTTTTAACCTTTaGTGGATTCTTCAAACGTCG +
Preference number: 5 (lower is better)
Translates to: SPSIGILQQGNRQEARLHGLFNL*WILQTS
Trigger: CGACGTTTGAAGAATCCACAAAAGGTTAAAAAGTCC...GTGGAGCCTGGCCTCCTGTCGATTCCCCTGCTGGAGGATGCCAATGGAGGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp TGGGCATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATGGAGCCAGAAACTCTaGCCAGATTTCTTCTACCCT +
Preference number: 5 (lower is better)
Translates to: WALEPCMRVSASSKGAPPWSQKL*PDFFYP
Trigger: AGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCCA...TGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAATGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGACACCATCGCCCTTCATaGCCCTCACTCTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRHHRPS*PSLFLL
Trigger: AAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGTG...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCACACCATCGCCCTTCATaGCCCTCACTCTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSHHRPS*PSLFLL
Trigger: AAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGTG...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCTCATGCCTCTTGAATTaGCCAGAAGGTGTGACCGTC +
Preference number: 5 (lower is better)
Translates to: TVTKSPRKETLSADVERRSCLLN*PEGVTV
Trigger: GACGGTCACACCTTCTGGCAAATTCAAGAGGCATGA...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGTCGAACGCTGGACCCTaGAGACATGTGACGGGACCT +
Preference number: 5 (lower is better)
Translates to: SFTVTKSPRKETLSADVESNAGP*RHVTGP
Trigger: AGGTCCCGTCACATGTCTCAAGGGTCCAGCGTTCGA...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GACCGGTTTAGAGGGGTGCTTTGGCTGGGCCTTCAGATAAAGACTGGGAGGAGAAGACATAGACAGGACTaGGAGGTGGTGGGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: DRFRGVLWLGLQIKTGRRRHRQD*EVVGWK
Trigger: TTTCCACCCCACCACCTCCAAGTCCTGTCTATGTCT...TCTCCTCCCAGTCTTTATCTGAAGGCCCAGCCAAAGCACCCCTCTAAACCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGGCCAGTGGGGGAAACTaGGGCATGGTAGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQASGGN*GMVVKN
Trigger: GTTCTTGACTACCATGCCCAAGTTTCCCCCACTGGC...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTCCCAGCTCCTGGACCTaGCAGCAACACCTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: CPARIAASETLRTQHLSSPSSWT*QQHLPP
Trigger: TGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGG...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGACCCAGCTCCTGGACCTaGCAGCAACACCTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRPSSWT*QQHLPP
Trigger: TGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGG...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTCCAGCAGTAAACGATCATGTTaGGAGAACTCTCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: CMRVSASSKGAPPLASSSSKRSC*ENSPLG
Trigger: ACCCAGAGGAGAGTTCTCCAAACATGATCGTTTACT...GCTGGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCATGTTGGCTGGGCTCTTaGCTCATCTCTATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSCWLGS*LISMSH
Trigger: GTGGGACATAGAGATGAGCAAAGAGCCCAGCCAACA...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCTTTTTACTCGCTGTaGGCTGGGCTCTTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLSFYSL*AGLFAH
Trigger: ATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAGA...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS GCA 90 bp AACGATCATGTTTGGAGAACTCTCCTCTGGGTCAGCAACCCCCACTaGTCTTTGATCCCCGGATCCTTGAGCCATCCTGAGTGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: NDHVWRTLLWVSNPH*SLIPGSLSHPECLH
Trigger: GTGAAGACACTCAGGATGGCTCAAGGATCCGGGGATCAAAGAGCAGTGGGGGTTGCTGACCCAGAGGAGAGTTCTCCAAACATGATCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000555571.5
ENST00000556437.5
CDS GCA 90 bp GCGCTTCACACCCAGAAACCCAGGAACATGATTTATATGCAGACCTaGACCCATCCCACACAAGTCCACACGCCAGCTTGCCTAACCACT +
Preference number: 5 (lower is better)
Translates to: ALHTQKPRNMIYMQT*THPTQVHTPACLTT
Trigger: AGTGGTTAGGCAAGCTGGCGTGTGGACTTGTGTGGGATGGGTGCAGGTCTGCATATAAATCATGTTCCTGGGTTTCTGGGTGTGAAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553530.5
CDS GCA 90 bp AGCTCTGCAGGCTCCCTGCGGTTCCTGAGGGCTCAGGGTCCTTTTTaGAGGATGATTTGGGTGCCACATGAAAATGTACATCACTCAGCT +
Preference number: 5 (lower is better)
Translates to: SSAGSLRFLRAQGPF*RMIWVPHENVHHSA
Trigger: AGCTGAGTGATGTACATTTTCATGTGGCACCCAAATCATCCTGCAAAAAGGACCCTGAGCCCTCAGGAACCGCAGGGAGCCTGCAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS-3UTR CAA 90 bp CCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTCCCCCTGTCTTGTCATCTaGCATCTTTGTAATGATGTC +
Preference number: 5 (lower is better)
Translates to: PCMRVSASSKGAPPLASSPCLVI*HLCNDV
Trigger: GACATCATTACAAAGATGCAAGATGACAAGACAGGG...GGAGGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCAGGCACACCCCCTGTCTaGTCATCTTGCATCTTTGTA +
Preference number: 5 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSGTPPV*SSCIFV
Trigger: TACAAAGATGCAAGATGACAAGACAGGGGGTGTGCC...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATTAGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCTTGGAGAGAAAGCTCTaGACTGTTCTGATGGGCACA +
Preference number: 5 (lower is better)
Translates to: IRAMYEGVGLLQRSPSIGLERKL*TVLMGT
Trigger: TGTGCCCATCAGAACAGTCAAGAGCTTTCTCTCCAA...GCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp GTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCAGCCTTGCTTTATTTaGCATTGTCCTCTTACAGAG +
Preference number: 5 (lower is better)
Translates to: VTKSPRKETLSADVERRRQPCFI*HCPLTE
Trigger: CTCTGTAAGAGGACAATGCAAAATAAAGCAAGGCTG...GCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCAGGCCCTCTGGAGTCTaGCTAAGTTTTCTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: TVTKSPRKETLSADVERRRPSGV*LSFLLH
Trigger: ATGAAGCAGAAAACTTAGCAAGACTCCAGAGGGCCT...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTGGATATCCATTTCTGTaGTGTTCACACAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPGYPFL*CSHSLA
Trigger: TGCCAGGCTGTGTGAACACAACAGAAATGGATATCC...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGTCTTTTTACTCGCTGTaGGCTGGGCTCTTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLSFYSL*AGLFAF
Trigger: GAAAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAGA...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343854.10
CDS-3UTR CAA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTGGAGCCAGAAACTCTaGCCAGATTTCTTCTACCCT +
Preference number: 5 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPWSQKL*PDFFYP
Trigger: AGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCCA...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGTTAGCGAGTGGAGTGTaGGAATACAACTGTACAAAG +
Preference number: 5 (lower is better)
Translates to: TKSPRKETLSADVERRRLLASGV*EYNCTK
Trigger: CTTTGTACAGTTGTATTCCAACACTCCACTCGCTAA...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTTACCTCACAGCCAGGTaGGCAAATGGTCATTTTGAC +
Preference number: 5 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALYLTAR*ANGHFD
Trigger: GTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTA...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGGTCTCCCTAGCTCCGTaGTGCTTACTGACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKVSLAP*CLLTLP
Trigger: GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGAC...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTGTCTCCCTAGCTCCGTaGTGCTTACTGACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: CPARIAASETLRTQHLSSVSLAP*CLLTLP
Trigger: GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGAC...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTCCTGGTGGTGGTTTTaGAAGCACATGTATATGGAG +
Preference number: 5 (lower is better)
Translates to: SPFTHRVSPPSPFIALTLSWWWF*KHMYME
Trigger: CTCCATATACATGTGCTTCAAAAACCACCACCAGGA...AAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCTGCTGGCATCTGCTGTaGCTATGGTTACACGAGCAC +
Preference number: 5 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSCWHLL*LWLHEH
Trigger: GTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCA...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTTGCTGGCATCTGCTGTaGCTATGGTTACACGAGCAC +
Preference number: 5 (lower is better)
Translates to: GCGWTFICASLQAFLFPCCWHLL*LWLHEH
Trigger: GTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCA...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCACTGTACCAGCATGTTaGGTTCTGGGGTCCAATCCC +
Preference number: 5 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCTVPAC*VLGSNP
Trigger: GGGATTGGACCCCAGAACCAAACATGCTGGTACAGT...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGAACCCCCACTGCTCTTaGATCCCCGGATCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: FSFTVTKSPRKETLSADVNPHCS*IPGSLS
Trigger: GCTCAAGGATCCGGGGATCAAAGAGCAGTGGGGGTT...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
CDS-3UTR CAA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTAGTAAACGATCATGTTaGGAGAACTCTCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFSKRSC*ENSPLG
Trigger: ACCCAGAGGAGAGTTCTCCAAACATGATCGTTTACT...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
CDS-3UTR CAA 90 bp AGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGCACGTATCGCCCGTGGCAGCTTCTaGGTGTGCGGAGCCACACGG +
Preference number: 5 (lower is better)
Translates to: RIMDASEPSSINQDRARIARGSF*VCGATR
Trigger: CCGTGTGGCTCCGCACACCAAGAAGCTGCCACGGGC...GATACGTGCTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS CCA 90 bp GACCTTATGGAGTGGGAGAGTCCCACGGCCACCTCTTTCCTCATTTaGTCCTCCAGCTTGGAATATTCTCTCTCCTGCTTCTTCGTCTAC +
Preference number: 5 (lower is better)
Translates to: DLMEWESPTATSFLI*SSSLEYSLSCFFVY
Trigger: GTAGACGAAGAAGCAGGAGAGAGAATATTCCAAGCTGGAGGACCAAATGAGGAAAGAGGTGGCCGTGGGACTCTCCCACTCCATAAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS-3UTR CAA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAAGGCACACCCCCTGTCTaGTCATCTTGCATCTTTGTA +
Preference number: 5 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQGTPPV*SSCIFV
Trigger: TACAAAGATGCAAGATGACAAGACAGGGGGTGTGCC...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCGGCACACCCCCTGTCTaGTCATCTTGCATCTTTGTA +
Preference number: 5 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSGTPPV*SSCIFV
Trigger: TACAAAGATGCAAGATGACAAGACAGGGGGTGTGCC...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTGAACATGGTCTGAGATaGGAAAGATGTAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: GCGWTFICASLQAFLFPCEHGLR*ERCSPG
Trigger: CCCAGGGCTACATCTTTCCAATCTCAGACCATGTTC...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCGAACATGGTCTGAGATaGGAAAGATGTAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: HVPMCSASPSCNSESQEVEHGLR*ERCSPG
Trigger: CCCAGGGCTACATCTTTCCAATCTCAGACCATGTTC...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCAGCCTTGCTTTATTTaGCATTGTCCTCTTACAGAG +
Preference number: 5 (lower is better)
Translates to: RAMYEGVGLLQRSPSIGIQPCFI*HCPLTE
Trigger: CTCTGTAAGAGGACAATGCAAAATAAAGCAAGGCTG...GATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp ACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGGGACTTTTTAACCTTTaGTGGATTCTTCAAACGTCG +
Preference number: 5 (lower is better)
Translates to: TKSPRKETLSADVERRRLGLFNL*WILQTS
Trigger: CGACGTTTGAAGAATCCACAAAAGGTTAAAAAGTCC...CAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGATTTCTTCTACCCTCTaGGCCACATCCTGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQISSTL*ATSCRG
Trigger: ACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAAT...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAAATTTCTTCTACCCTCTaGGCCACATCCTGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQISSTL*ATSCRG
Trigger: ACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAAT...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGCCTGGCCTGGTCCCTTCGTAGCATACTCTGCCCCAGCTTCACACACAAAGGATTAGCGAGTGGAGTGTaGGAATACAACTGTACAAAG +
Preference number: 5 (lower is better)
Translates to: GLAWSLRSILCPSFTHKGLASGV*EYNCTK
Trigger: CTTTGTACAGTTGTATTCCAACACTCCACTCGCTAA...TCCTTTGTGTGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCTCATGCCTCTTGAATTaGCCAGAAGGTGTGACCGTC +
Preference number: 5 (lower is better)
Translates to: HVPMCSASPSCNSESQEVSCLLN*PEGVTV
Trigger: GACGGTCACACCTTCTGGCAAATTCAAGAGGCATGA...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCTACCTCACAGCCAGGTaGGCAAATGGTCATTTTGAC +
Preference number: 5 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPYLTAR*ANGHFD
Trigger: GTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTA...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACGCCAGTGGGGGAAACTaGGGCATGGTAGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYASGGN*GMVVKN
Trigger: GTTCTTGACTACCATGCCCAAGTTTCCCCCACTGGC...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACACCAAGAGAGGAACCATaGCCAGTGGGGGAAACTTGG +
Preference number: 5 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTPREEP*PVGETW
Trigger: CCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTGG...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTATTATTGCTCTGGGTTaGAGTCCATCTGAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: LFLSGLPIHPPSLPTIALIIALG*SPSEVS
Trigger: GGAGACTTCAGATGGACTCAAACCCAGAGCAATAAT...AAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCCGTTCCACTCCCTTCTaGCAAAGCTTCTGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSRSTPF*QSFWLD
Trigger: ATCAAGCCAGAAGCTTTGCAAGAAGGGAGTGGAACG...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTCGTTCCACTCCCTTCTaGCAAAGCTTCTGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: GCGWTFICASLQAFLFPCRSTPF*QSFWLD
Trigger: ATCAAGCCAGAAGCTTTGCAAGAAGGGAGTGGAACG...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGCGTGGTAGATGGACCTaGGATAGGCAGCCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKRGRWT*DRQPRS
Trigger: GGAACGAGGCTGCCTATCCAAGGTCCATCTACCACG...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CACCGGGCCCAGCCCAGGCTCTGTGGACTCTTTCTTTCTGGTCTCCCCATTCACATTTTCCAAATGTACTaGCATGACCAAGTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: HRAQPRLCGLFLSGLPIHIFQMY*HDQVLR
Trigger: ACGCAGAACTTGGTCATGCAAGTACATTTGGAAAAT...GTGAATGGGGAGACCAGAAAGAAAGAGTCCACAGAGCCTGGGCTGGGCCCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCGTAGGGGAATTTGCTTaGCTACAGAATTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: TVTKSPRKETLSADVERRVGEFA*LQNCLQ
Trigger: TTGCAGGCAATTCTGTAGCAAAGCAAATTCCCCTAC...GCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGGTAGGGGAATTTGCTTaGCTACAGAATTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLVGEFA*LQNCLQ
Trigger: TTGCAGGCAATTCTGTAGCAAAGCAAATTCCCCTAC...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGTGCTGGCATCTGCTGTaGCTATGGTTACACGAGCAC +
Preference number: 5 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNECWHLL*LWLHEH
Trigger: GTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCA...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGTGCTGGCATCTGCTGTaGCTATGGTTACACGAGCAC +
Preference number: 5 (lower is better)
Translates to: SFTVTKSPRKETLSADVECWHLL*LWLHEH
Trigger: GTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCA...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATGTACTAATGAGTAGGTaGCTGGCATCTGCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHVLMSR*LASAVA
Trigger: AGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACTCGCTGATCCAAGGGTaGGATGGCTCAGCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: NELGSGPLSEWSVGIQLYSLIQG*DGSAGV
Trigger: AACACCAGCTGAGCCATCCAACCCTTGGATCAGCGA...GTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTCGCTGATCCAAGGGTaGGATGGCTCAGCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: FSFTVTKSPRKETLSADVSLIQG*DGSAGV
Trigger: AACACCAGCTGAGCCATCCAACCCTTGGATCAGCGA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGTTCTCCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGATCTTTTTACTCGCTGTaGGCTGGGCTCTTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: CSPLNELGSGPLSEWSVGSFYSL*AGLFAH
Trigger: ATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAGA...TCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGGAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GCACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTCCTTGACCGTGACATaGGCAGTGCTGTCGCCTTGC +
Preference number: 5 (lower is better)
Translates to: ARIRIPPPLLLQKITRLGSLTVT*AVLSPC
Trigger: GCAAGGCGACAGCACTGCCAATGTCACGGTCAAGGA...ACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS TCA 90 bp TTGGCAGAAACAGTCTGTTGGCTGAAAGCAGAAGTGATTTGGGCATaGACCGGTGTCCTTGCTCGAGGCCGGCATTCCTTTCTGCCTTAT +
Preference number: 5 (lower is better)
Translates to: LAETVCWLKAEVIWA*TGVLARGRHSFLPY
Trigger: ATAAGGCAGAAAGGAATGCCGGCCTCGAGCAAGGACACCGGTTCATGCCCAAATCACTTCTGCTTTCAGCCAACAGACTGTTTCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553690.5
CDS CCA 90 bp GAGTCTTTGCCACCTGCTGGTATCTCCAGGAGCAAAACCAAAGGCTaGATTTCTCAGGACTCCTCTTCCAGTGGGGAGTGCTTCATAATC +
Preference number: 5 (lower is better)
Translates to: ESLPPAGISRSKTKG*ISQDSSSSGECFII
Trigger: GATTATGAAGCACTCCCCACTGGAAGAGGAGTCCTGAGAAATCCAGCCTTTGGTTTTGCTCCTGGAGATACCAGCAGGTGGCAAAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555368.5
CDS-3UTR CAA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCCCTGTCTTGTCATCTaGCATCTTTGTAATGATGTC +
Preference number: 5 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLPCLVI*HLCNDV
Trigger: GACATCATTACAAAGATGCAAGATGACAAGACAGGG...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGGGCACACCCCCTGTCTaGTCATCTTGCATCTTTGTA +
Preference number: 5 (lower is better)
Translates to: SFTVTKSPRKETLSADVEGTPPV*SSCIFV
Trigger: TACAAAGATGCAAGATGACAAGACAGGGGGTGTGCC...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGGAACATGGTCTGAGATaGGAAAGATGTAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNEEHGLR*ERCSPG
Trigger: CCCAGGGCTACATCTTTCCAATCTCAGACCATGTTC...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GCCAAGTCCTGGTCATTTGGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCAGCCTTGCTTTATTTaGCATTGTCCTCTTACAGAG +
Preference number: 5 (lower is better)
Translates to: AKSWSFGPCPRIDPGPLLQPCFI*HCPLTE
Trigger: CTCTGTAAGAGGACAATGCAAAATAAAGCAAGGCTG...CAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCAGGCCCTCTGGAGTCTaGCTAAGTTTTCTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSRPSGV*LSFLLH
Trigger: ATGAAGCAGAAAACTTAGCAAGACTCCAGAGGGCCT...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCGGATATCCATTTCTGTaGTGTTCACACAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: HVPMCSASPSCNSESQEVGYPFL*CSHSLA
Trigger: TGCCAGGCTGTGTGAACACAACAGAAATGGATATCC...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGGGATATCCATTTCTGTaGTGTTCACACAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQGYPFL*CSHSLA
Trigger: TGCCAGGCTGTGTGAACACAACAGAAATGGATATCC...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGGATATCCATTTCTGTaGTGTTCACACAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSGYPFL*CSHSLA
Trigger: TGCCAGGCTGTGTGAACACAACAGAAATGGATATCC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGATTTCTTCTACCCTCTaGGCCACATCCTGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: SFTVTKSPRKETLSADVEISSTL*ATSCRG
Trigger: ACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAAT...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCTGGAGCCAGAAACTCTaGCCAGATTTCTTCTACCCT +
Preference number: 5 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSWSQKL*PDFFYP
Trigger: AGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCCA...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GAGCCATGTATGAGGGTGTCGGCCTCCTCCAAAGGAGCCCCTCCATTGGCATCCTCCATCTTTGACATTTaGACTGGTTATCTCATAGCT +
Preference number: 5 (lower is better)
Translates to: EPCMRVSASSKGAPPLASSIFDI*TGYLIA
Trigger: AGCTATGAGATAACCAGTCAAAATGTCAAAGATGGA...GGATGCCAATGGAGGGGCTCCTTTGGAGGAGGCCGACACCCTCATACATGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS-3UTR CAA 90 bp AAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGCGCCGCCGCCTGCCTTCCATCTTTGACATTTaGACTGGTTATCTCATAGCT +
Preference number: 5 (lower is better)
Translates to: KSPRKETLSADVERRRLPSIFDI*TGYLIA
Trigger: AGCTATGAGATAACCAGTCAAAATGTCAAAGATGGA...AGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGCACCATCGCCCTTCATaGCCCTCACTCTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRHHRPS*PSLFLL
Trigger: AAGGAGAAAGAGTGAGGGCAATGAAGGGCGATGGTG...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACTCTTTCTTTCTGGTCTCCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTTAGCGAGTGGAGTGTaGGAATACAACTGTACAAAG +
Preference number: 5 (lower is better)
Translates to: TLSFWSPHSPTESPHHRPLASGV*EYNCTK
Trigger: CTTTGTACAGTTGTATTCCAACACTCCACTCGCTAA...AGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGGAGACCAGAAAGAAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTTACCTCACAGCCAGGTaGGCAAATGGTCATTTTGAC +
Preference number: 5 (lower is better)
Translates to: GCGWTFICASLQAFLFPCYLTAR*ANGHFD
Trigger: GTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTA...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTACCTCACAGCCAGGTaGGCAAATGGTCATTTTGAC +
Preference number: 5 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSYLTAR*ANGHFD
Trigger: GTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTA...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGCAAGCATCTGAGCCTTaGGTCACCAGCTGGCGAATT +
Preference number: 5 (lower is better)
Translates to: FSFTVTKSPRKETLSADVQASEP*VTSWRI
Trigger: AATTCGCCAGCTGGTGACCAAAGGCTCAGATGCTTG...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAGACATAGACAGGACTaGGAGGTGGTGGGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTRHRQD*EVVGWK
Trigger: TTTCCACCCCACCACCTCCAAGTCCTGTCTATGTCT...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGGCCAGTGGGGGAAACTaGGGCATGGTAGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKASGGN*GMVVKN
Trigger: GTTCTTGACTACCATGCCCAAGTTTCCCCCACTGGC...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGCCAAGAGAGGAACCATaGCCAGTGGGGGAAACTTGG +
Preference number: 5 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQPREEP*PVGETW
Trigger: CCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTGG...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGCCAAGAGAGGAACCATaGCCAGTGGGGGAAACTTGG +
Preference number: 5 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKPREEP*PVGETW
Trigger: CCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTGG...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATTGCTACATATTCAACTaGGGCAGCTCCTTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHCYIFN*GSSFLR
Trigger: CCTCAAAAAGGAGCTGCCCAAGTTGAATATGTAGCA...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTGCTGGCATCTGCTGTaGCTATGGTTACACGAGCAC +
Preference number: 5 (lower is better)
Translates to: FSFTVTKSPRKETLSADVCWHLL*LWLHEH
Trigger: GTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CATGTCCCCATGTGTTCAGCTAGTCCAAGCTGCAACTCAGAGTCGCAAGAGGTCGTACTAATGAGTAGGTaGCTGGCATCTGCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: HVPMCSASPSCNSESQEVVLMSR*LASAVA
Trigger: AGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC...GACCTCTTGCGACTCTGAGTTGCAGCTTGGACTAGCTGAACACATGGGGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGACTGTACCAGCATGTTaGGTTCTGGGGTCCAATCCC +
Preference number: 5 (lower is better)
Translates to: FSFTVTKSPRKETLSADVTVPAC*VLGSNP
Trigger: GGGATTGGACCCCAGAACCAAACATGCTGGTACAGT...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTGTTGGCTGGGCTCTTaGCTCATCTCTATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: FSFTVTKSPRKETLSADVCWLGS*LISMSH
Trigger: GTGGGACATAGAGATGAGCAAAGAGCCCAGCCAACA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS TCA 90 bp ACTTTCTGGCTTCTTCTTGGCCAGCAGCAAATCCTGGTAAGCATTTaGCCGGAGGAAGCGGGCATAGCTGTCACTCTTCATCAGCTTGTA +
Preference number: 5 (lower is better)
Translates to: TFWLLLGQQQILVSI*PEEAGIAVTLHQLV
Trigger: TACAAGCTGATGAAGAGTGACAGCTATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGATTTGCTGCTGGCCAAGAAGAAGCCAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343854.10
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000554782.1
ENST00000556437.5
ENST00000622468.4
CDS TCA 90 bp TGGGCTCTTTGCTCATCTCTATGTCCCACAAAGCAACGTCATCGCTaGTCCAAGGGTTGGATGGCTCAGCTGGTGTTATCAAAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: WALCSSLCPTKQRHR*SKGWMAQLVLSKGH
Trigger: ATGACCCTTTGATAACACCAGCTGAGCCATCCAACCCTTGGATCAGCGATGACGTTGCTTTGTGGGACATAGAGATGAGCAAAGAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554782.1
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS TCA 90 bp GCTCACTTTCTTCTTCTTGGCCAGCAGCAAATCCTGGTAAGCATTTaGCCGGAGGAAGCGGGCATAGCTGTCACTCTTCATCAGCTTGTA +
Preference number: 5 (lower is better)
Translates to: AHFLLLGQQQILVSI*PEEAGIAVTLHQLV
Trigger: TACAAGCTGATGAAGAGTGACAGCTATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGATTTGCTGCTGGCCAAGAAGAAGAAAGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS GCA 90 bp TGTTGTTTTCCTGATTGGTTGGCTGAGTACATGCACCGGGCTCTGTaGCTGGGACTCTTCAGTCACGCCATACACGGACTTTTTAACCTT +
Preference number: 5 (lower is better)
Translates to: CCFPDWLAEYMHRAL*LGLFSHAIHGLFNL
Trigger: AAGGTTAAAAAGTCCGTGTATGGCGTGACTGAAGAGTCCCAGGCACAGAGCCCGGTGCATGTACTCAGCCAACCAATCAGGAAAACAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000343854.10
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554734.1
ENST00000554782.1
ENST00000555368.5
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS CCA 90 bp TCCTCAGACTTGAAGCTCTCTGACTTCTCTTTGAACTTTCCAGTCTaGACCACAGGCAGAGTTGGGTCTCCTCTCCTTGACCGTGACATT +
Preference number: 5 (lower is better)
Translates to: SSDLKLSDFSLNFPV*TTGRVGSPLLDRDI
Trigger: AATGTCACGGTCAAGGAGAGGAGACCCAACTCTGCCTGTGGTCCAGACTGGAAAGTTCAAAGAGAAGTCAGAGAGCTTCAAGTCTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS CCA 90 bp GGGAGAGTCCCACGGCCACCTCTTTCCTCATTTGGTCCTCCAGCTTaGAATATTCTCTCTCCTGCTTCTTCGTCTACTATTATCCTGTGT +
Preference number: 5 (lower is better)
Translates to: GRVPRPPLSSFGPPA*NILSPASSSTIILC
Trigger: ACACAGGATAATAGTAGACGAAGAAGCAGGAGAGAGAATATTCCAAGCTGGAGGACCAAATGAGGAAAGAGGTGGCCGTGGGACTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS-3UTR CAA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGTTGGAGAGAAAGCTCTaGACTGTTCTGATGGGCACA +
Preference number: 5 (lower is better)
Translates to: SFTVTKSPRKETLSADVELERKL*TVLMGT
Trigger: TGTGCCCATCAGAACAGTCAAGAGCTTTCTCTCCAA...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGTTGGAGAGAAAGCTCTaGACTGTTCTGATGGGCACA +
Preference number: 5 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNELERKL*TVLMGT
Trigger: TGTGCCCATCAGAACAGTCAAGAGCTTTCTCTCCAA...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGAACATGGTCTGAGATaGGAAAGATGTAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAEHGLR*ERCSPG
Trigger: CCCAGGGCTACATCTTTCCAATCTCAGACCATGTTC...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGAACATGGTCTGAGATaGGAAAGATGTAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSEHGLR*ERCSPG
Trigger: CCCAGGGCTACATCTTTCCAATCTCAGACCATGTTC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGAGGCCCTCTGGAGTCTaGCTAAGTTTTCTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNERPSGV*LSFLLH
Trigger: ATGAAGCAGAAAACTTAGCAAGACTCCAGAGGGCCT...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCTGGGATCACCGGTCAATCTTTACTaGTGCTTCTGCTTGCATAAA +
Preference number: 5 (lower is better)
Translates to: DSRDRNPTTCSPLNELGSPVNLY*CFCLHK
Trigger: TTTATGCAAGCAGAAGCACAAGTAAAGATTGACCGG...TGATCCCAGCTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATCCGGTCAATCTTTACTaGTGCTTCTGCTTGCATAAA +
Preference number: 5 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHPVNLY*CFCLHK
Trigger: TTTATGCAAGCAGAAGCACAAGTAAAGATTGACCGG...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGATTTCTTCTACCCTCTaGGCCACATCCTGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRISSTL*ATSCRG
Trigger: ACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAAT...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCCCATTCACCCACCGAGTCTCCCCACCATCGCCCTTCATTGCCCTCACTCTTTTCCATCTTTGACATTTaGACTGGTTATCTCATAGCT +
Preference number: 5 (lower is better)
Translates to: PHSPTESPHHRPSLPSLFSIFDI*TGYLIA
Trigger: AGCTATGAGATAACCAGTCAAAATGTCAAAGATGGA...AAAGAGTGAGGGCAATGAAGGGCGATGGTGGGGAGACTCGGTGGGTGAATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGTCCACTCATGCCTCTaGAATTTGCCAGAAGGTGTG +
Preference number: 5 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSVHSCL*NLPEGV
Trigger: CACACCTTCTGGCAAATTCAAGAGGCATGAGTGGAC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGTCCACTCATGCCTCTaGAATTTGCCAGAAGGTGTG +
Preference number: 5 (lower is better)
Translates to: FSFTVTKSPRKETLSADVVHSCL*NLPEGV
Trigger: CACACCTTCTGGCAAATTCAAGAGGCATGAGTGGAC...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGAGACATAGACAGGACTaGGAGGTGGTGGGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQRHRQD*EVVGWK
Trigger: TTTCCACCCCACCACCTCCAAGTCCTGTCTATGTCT...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTTTCCTCTTCCCATGTATTATTGCTCTGGGTTaGAGTCCATCTGAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: GCGWTFICASLQAFLFPCIIALG*SPSEVS
Trigger: GGAGACTTCAGATGGACTCAAACCCAGAGCAATAAT...ACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCATTATTGCTCTGGGTTaGAGTCCATCTGAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSIIALG*SPSEVS
Trigger: GGAGACTTCAGATGGACTCAAACCCAGAGCAATAAT...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGGTAGGGGAATTTGCTTaGCTACAGAATTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMVGEFA*LQNCLQ
Trigger: TTGCAGGCAATTCTGTAGCAAAGCAAATTCCCCTAC...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTCCTGGTGGTGGTTTTaGAAGCACATGTATATGGAG +
Preference number: 5 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMSWWWF*KHMYME
Trigger: CTCCATATACATGTGCTTCAAAAACCACCACCAGGA...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGCCCAGAGTTTCCCAGCTCCTGGACCTTGCAGCAACACCTCCCTCCAATACATCTTATCCCATGGTCTTaGCTACATATTCAACTTGGG +
Preference number: 5 (lower is better)
Translates to: SPEFPSSWTLQQHLPPIHLIPWS*LHIQLG
Trigger: CCCAAGTTGAATATGTAGCAAAGACCATGGGATAAG...ATGTATTGGAGGGAGGTGTTGCTGCAAGGTCCAGGAGCTGGGAAACTCTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGAGGCTACATTTGCTACTTaGCTACTTTATGGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: SFTVTKSPRKETLSADVEATFAT*LLYGPW
Trigger: CCAGGGGCCATAAAGTAGCAAAGTAGCAAATGTAGC...CTCCACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGACCCGGGCCCTTTATaGCTACATTTGCTACTTTGC +
Preference number: 5 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRDPGPL*LHLLLC
Trigger: GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTC...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGGCACCCGCAGGCCTaGTGTTCTGCACATTCACAC +
Preference number: 5 (lower is better)
Translates to: TYQNSPTTFAAEDYKVGLRHPQA*CSAHSH
Trigger: GTGTGAATGTGCAGAACACAAGGCCTGCGGGTGCCT...TAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp TATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGAAGTCCCAGAAGCCTaGACTCTGACAGCCCGTGGC +
Preference number: 5 (lower is better)
Translates to: YQNSPTTFAAEDYKVGLSEVPEA*TLTARG
Trigger: GCCACGGGCTGTCAGAGTCAAGGCTTCTGGGACTTC...ACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS CCA 90 bp CTGAGGTTTTCTGAACTGAATTCGGACTCCAGGAATCGTAGAAACTaGTCCCGCCCCACCTGGTCCTTCAATATCTCATCGAAAGAGAAG +
Preference number: 5 (lower is better)
Translates to: LRFSELNSDSRNRRN*SRPTWSFNISSKEK
Trigger: CTTCTCTTTCGATGAGATATTGAAGGACCAGGTGGGGCGGGACCAGTTTCTACGATTCCTGGAGTCCGAATTCAGTTCAGAAAACCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000343854.10
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554782.1
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS CCA 90 bp TCCCTGCGGTTCCTGAGGGCTCAGGGTCCTTTTTGCAGGATGATTTaGGTGCCACATGAAAATGTACATCACTCAGCTGGATATAGAGAT +
Preference number: 5 (lower is better)
Translates to: SLRFLRAQGPFCRMI*VPHENVHHSAGYRD
Trigger: ATCTCTATATCCAGCTGAGTGATGTACATTTTCATGTGGCACCCAAATCATCCTGCAAAAAGGACCCTGAGCCCTCAGGAACCGCAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS-3UTR CAA 90 bp AGCTTCTGGCTTGATCTACTGGGGAACATGAGTGCCTTAGCTGTGGGGTGGTGTCCCTGTCTTGTCATCTaGCATCTTTGTAATGATGTC +
Preference number: 5 (lower is better)
Translates to: SFWLDLLGNMSALAVGWCPCLVI*HLCNDV
Trigger: GACATCATTACAAAGATGCAAGATGACAAGACAGGG...ACACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGCCCTGTCTTGTCATCTaGCATCTTTGTAATGATGTC +
Preference number: 5 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQPCLVI*HLCNDV
Trigger: GACATCATTACAAAGATGCAAGATGACAAGACAGGG...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCATTGGAGAGAAAGCTCTaGACTGTTCTGATGGGCACA +
Preference number: 5 (lower is better)
Translates to: HSFSFTVTKSPRKETLSALERKL*TVLMGT
Trigger: TGTGCCCATCAGAACAGTCAAGAGCTTTCTCTCCAA...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCTTGGAGAGAAAGCTCTaGACTGTTCTGATGGGCACA +
Preference number: 5 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSLERKL*TVLMGT
Trigger: TGTGCCCATCAGAACAGTCAAGAGCTTTCTCTCCAA...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCCAGCCTTGCTTTATTTaGCATTGTCCTCTTACAGAG +
Preference number: 5 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCQPCFI*HCPLTE
Trigger: CTCTGTAAGAGGACAATGCAAAATAAAGCAAGGCTG...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGCTGCCAGTTCCAGCCTaGCTTTATTTTGCATTGTCC +
Preference number: 5 (lower is better)
Translates to: FSFTVTKSPRKETLSADVLPVPA*LYFALS
Trigger: GGACAATGCAAAATAAAGCAAGGCTGGAACTGGCAG...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGAGGCCCTCTGGAGTCTaGCTAAGTTTTCTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGRPSGV*LSFLLH
Trigger: ATGAAGCAGAAAACTTAGCAAGACTCCAGAGGGCCT...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCCCGGTCAATCTTTACTaGTGCTTCTGCTTGCATAAA +
Preference number: 5 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCPVNLY*CFCLHK
Trigger: TTTATGCAAGCAGAAGCACAAGTAAAGATTGACCGG...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGGATATCCATTTCTGTaGTGTTCACACAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRGYPFL*CSHSLA
Trigger: TGCCAGGCTGTGTGAACACAACAGAAATGGATATCC...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAATTTCTTCTACCCTCTaGGCCACATCCTGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRISSTL*ATSCRG
Trigger: ACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAAT...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACATGGAGCCAGAAACTCTaGCCAGATTTCTTCTACCCT +
Preference number: 5 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTWSQKL*PDFFYP
Trigger: AGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCCA...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCTTAGCGAGTGGAGTGTaGGAATACAACTGTACAAAG +
Preference number: 5 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSLASGV*EYNCTK
Trigger: CTTTGTACAGTTGTATTCCAACACTCCACTCGCTAA...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACATCGAACGCTGGACCCTaGAGACATGTGACGGGACCT +
Preference number: 5 (lower is better)
Translates to: YIHYLTARLANGHFDTHTSNAGP*RHVTGP
Trigger: AGGTCCCGTCACATGTCTCAAGGGTCCAGCGTTCGA...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCATACCTCACAGCCAGGTaGGCAAATGGTCATTTTGAC +
Preference number: 5 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAYLTAR*ANGHFD
Trigger: GTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTA...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTAGACATAGACAGGACTaGGAGGTGGTGGGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: KNSQGYNITKTPNARDGTRHRQD*EVVGWK
Trigger: TTTCCACCCCACCACCTCCAAGTCCTGTCTATGTCT...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGTTTGAGTCCATCTGAAGTCTCCCTAGCTCCGTTGTGCTTACTGACCCTCCCCATTTTCCAAATGTACTaGCATGACCAAGTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: GLSPSEVSLAPLCLLTLPIFQMY*HDQVLR
Trigger: ACGCAGAACTTGGTCATGCAAGTACATTTGGAAAAT...GGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGGTAGGGGAATTTGCTTaGCTACAGAATTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNEVGEFA*LQNCLQ
Trigger: TTGCAGGCAATTCTGTAGCAAAGCAAATTCCCCTAC...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCCTTATCCCATGGTCTTaGCTACATATTCAACTTGGG +
Preference number: 5 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSLIPWS*LHIQLG
Trigger: CCCAAGTTGAATATGTAGCAAAGACCATGGGATAAG...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGGGCCCAAAGGAAGAGAGCCCTTAATCCTTTCCCTCTTCTGGGAAGGCTTTCCCTTATCCCATGGTCTTaGCTACATATTCAACTTGGG +
Preference number: 5 (lower is better)
Translates to: RAQRKRALNPFPLLGRLSLIPWS*LHIQLG
Trigger: CCCAAGTTGAATATGTAGCAAAGACCATGGGATAAG...GGAAAGCCTTCCCAGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGTACTAATGAGTAGGTaGCTGGCATCTGCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRVLMSR*LASAVA
Trigger: AGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGGCTACATTTGCTACTTaGCTACTTTATGGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: FSFTVTKSPRKETLSADVATFAT*LLYGPW
Trigger: CCAGGGGCCATAAAGTAGCAAAGTAGCAAATGTAGC...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTTGTTGGCTGGGCTCTTaGCTCATCTCTATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: KNSQGYNITKTPNARDGTCWLGS*LISMSH
Trigger: GTGGGACATAGAGATGAGCAAAGAGCCCAGCCAACA...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGTCTTTTTACTCGCTGTaGGCTGGGCTCTTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGSFYSL*AGLFAH
Trigger: ATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAGA...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACATCTTTTTACTCGCTGTaGGCTGGGCTCTTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTSFYSL*AGLFAH
Trigger: ATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAGA...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCTCTTTTTACTCGCTGTaGGCTGGGCTCTTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSSFYSL*AGLFAH
Trigger: ATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAGA...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGTTGATCCCCGGATCCTaGAGCCATCCTGAGTGTCTT +
Preference number: 5 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLLIPGS*SHPECL
Trigger: AAGACACTCAGGATGGCTCAAGGATCCGGGGATCAA...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000553530.5
CDS-3UTR CAA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAAGTCCACACGCCAGCTaGCCTAACCACTTATGTAAG +
Preference number: 5 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRSPHAS*PNHLCK
Trigger: CTTACATAAGTGGTTAGGCAAGCTGGCGTGTGGACT...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553530.5
CDS-3UTR CAA 90 bp ATCTCAAGTGATAGTCGTGACAGGAACCCCACGACGTGTTCTCCCCTGAATGAGCCCTGTCTTGTCATCTaGCATCTTTGTAATGATGTC +
Preference number: 5 (lower is better)
Translates to: ISSDSRDRNPTTCSPLNEPCLVI*HLCNDV
Trigger: GACATCATTACAAAGATGCAAGATGACAAGACAGGG...CTCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGTTGGAGAGAAAGCTCTaGACTGTTCTGATGGGCACA +
Preference number: 5 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQLERKL*TVLMGT
Trigger: TGTGCCCATCAGAACAGTCAAGAGCTTTCTCTCCAA...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGGCCCAGGGACTTTTTAACCTTTaGTGGATTCTTCAAACGTCG +
Preference number: 5 (lower is better)
Translates to: IQLYKEERAVNRSLHRAQGLFNL*WILQTS
Trigger: CGACGTTTGAAGAATCCACAAAAGGTTAAAAAGTCC...CTGGGCCCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCGGACTTTTTAACCTTTaGTGGATTCTTCAAACGTCG +
Preference number: 5 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSGLFNL*WILQTS
Trigger: CGACGTTTGAAGAATCCACAAAAGGTTAAAAAGTCC...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CTGTGTAGACCAGGCCAATGGGGGACGGGCCAAGACCAGATTTTCCAAATGTACGGACTTTTTAACCTTTaGTGGATTCTTCAAACGTCG +
Preference number: 5 (lower is better)
Translates to: LCRPGQWGTGQDQIFQMYGLFNL*WILQTS
Trigger: CGACGTTTGAAGAATCCACAAAAGGTTAAAAAGTCC...GTACATTTGGAAAATCTGGTCTTGGCCCGTCCCCCATTGGCCTGGTCTACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGACCCTGTCCCCGTATAGACCCGGGCCCTTTATTGCTACATTTGCTACTTTGCGGACTTTTTAACCTTTaGTGGATTCTTCAAACGTCG +
Preference number: 5 (lower is better)
Translates to: GPCPRIDPGPLLLHLLLCGLFNL*WILQTS
Trigger: CGACGTTTGAAGAATCCACAAAAGGTTAAAAAGTCC...GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTCTATACGGGGACAGGGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ACAGAGCACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTATTTCTTCTACCCTCTaGGCCACATCCTGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: TEHVSEFPHHFCCRRLQGISSTL*ATSCRG
Trigger: ACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAAT...ACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGTGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTTGGAGCCAGAAACTCTaGCCAGATTTCTTCTACCCT +
Preference number: 5 (lower is better)
Translates to: CPARIAASETLRTQHLSSWSQKL*PDFFYP
Trigger: AGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCCA...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGTCATGCCTCTTGAATTaGCCAGAAGGTGTGACCGTC +
Preference number: 5 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLSCLLN*PEGVTV
Trigger: GACGGTCACACCTTCTGGCAAATTCAAGAGGCATGA...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTGGCAAATGGTCATTTaGACACACACACACAGGGAA +
Preference number: 5 (lower is better)
Translates to: FSFTVTKSPRKETLSADVWQMVI*THTHRE
Trigger: TTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCCA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACACCAAGAGAGGAACCATaGCCAGTGGGGGAAACTTGG +
Preference number: 5 (lower is better)
Translates to: YIHYLTARLANGHFDTHTPREEP*PVGETW
Trigger: CCAAGTTTCCCCCACTGGCAATGGTTCCTCTCTTGG...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGATTATTGCTCTGGGTTaGAGTCCATCTGAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: FSFTVTKSPRKETLSADVIIALG*SPSEVS
Trigger: GGAGACTTCAGATGGACTCAAACCCAGAGCAATAAT...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GAGAGTTCCTGCTGCTTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGATTTTCCAAATGTACTaGCATGACCAAGTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: ESSCCLVQAIWLRLDVYMIFQMY*HDQVLR
Trigger: ACGCAGAACTTGGTCATGCAAGTACATTTGGAAAAT...CATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAAGCAGCAGGAACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGTCCTGGTGGTGGTTTTaGAAGCACATGTATATGGAG +
Preference number: 5 (lower is better)
Translates to: FSFTVTKSPRKETLSADVSWWWF*KHMYME
Trigger: CTCCATATACATGTGCTTCAAAAACCACCACCAGGA...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACATGCTACATATTCAACTaGGGCAGCTCCTTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: MSWDQGLLASGVLEYNCTCYIFN*GSSFLR
Trigger: CCTCAAAAAGGAGCTGCCCAAGTTGAATATGTAGCA...TGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGGTACTAATGAGTAGGTaGCTGGCATCTGCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQVLMSR*LASAVA
Trigger: AGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGGACCCGGGCCCTTTATaGCTACATTTGCTACTTTGC +
Preference number: 5 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLDPGPL*LHLLLC
Trigger: GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTC...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCAGTAAACGATCATGTTaGGAGAACTCTCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSSKRSC*ENSPLG
Trigger: ACCCAGAGGAGAGTTCTCCAAACATGATCGTTTACT...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
CDS-3UTR CAA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACATCGCTGATCCAAGGGTaGGATGGCTCAGCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: YIHYLTARLANGHFDTHTSLIQG*DGSAGV
Trigger: AACACCAGCTGAGCCATCCAACCCTTGGATCAGCGA...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCTTGGGTCTCCTCTCCTaGACCGTGACATTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: RRLQGWVKCCLGCSISISLGLLS*TVTLAV
Trigger: CACTGCCAATGTCACGGTCAAGGAGAGGAGACCCAA...GGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGGAAGTTCTACGACCTaGCTCACTTTCTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAGSSTT*LTFFFL
Trigger: CAAGAAGAAGAAAGTGAGCAAGGTCGTAGAACTTCC...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS CCA 90 bp CTCTATGTCCCACAAAGCAACGTCATCGCTGATCCAAGGGTTGGATaGCTCAGCTGGTGTTATCAAAGGGTCATATTCCACATATTGTTC +
Preference number: 5 (lower is better)
Translates to: LYVPQSNVIADPRVG*LSWCYQRVIFHILF
Trigger: GAACAATATGTGGAATATGACCCTTTGATAACACCAGCTGAGCCATCCAACCCTTGGATCAGCGATGACGTTGCTTTGTGGGACATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554782.1
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS CCA 90 bp TGGCTTGTTCACACACAGCACTTAAAAGGTTCAATCACCCACAGCTaGGTTCCACTGTGGTTTCCAGGAACTCAAAGCTTGCTCAATCTT +
Preference number: 5 (lower is better)
Translates to: WLVHTQHLKGSITHS*VPLWFPGTQSLLNL
Trigger: AAGATTGAGCAAGCTTTGAGTTCCTGGAAACCACAGTGGAACCCAGCTGTGGGTGATTGAACCTTTTAAGTGCTGTGTGTGAACAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554734.1
CDS-3UTR CAA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTTTGGAGAGAAAGCTCTaGACTGTTCTGATGGGCACA +
Preference number: 5 (lower is better)
Translates to: KNSQGYNITKTPNARDGTLERKL*TVLMGT
Trigger: TGTGCCCATCAGAACAGTCAAGAGCTTTCTCTCCAA...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AAGAACTCACAAGGATACAACATAACGAAGACTCCTAATGCCCGCGATGGCACTAGGCCCTCTGGAGTCTaGCTAAGTTTTCTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: KNSQGYNITKTPNARDGTRPSGV*LSFLLH
Trigger: ATGAAGCAGAAAACTTAGCAAGACTCCAGAGGGCCT...AGTGCCATCGCGGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAGATGTGCCGGTCAATCTTTACTaGTGCTTCTGCTTGCATAAA +
Preference number: 5 (lower is better)
Translates to: FSFTVTKSPRKETLSADVPVNLY*CFCLHK
Trigger: TTTATGCAAGCAGAAGCACAAGTAAAGATTGACCGG...CACATCTGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCAGGATATCCATTTCTGTaGTGTTCACACAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISGYPFL*CSHSLA
Trigger: TGCCAGGCTGTGTGAACACAACAGAAATGGATATCC...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGTGGAGCCAGAAACTCTaGCCAGATTTCTTCTACCCT +
Preference number: 5 (lower is better)
Translates to: SPTTFAAEDYKVGLSVVLWSQKL*PDFFYP
Trigger: AGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCCA...CAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp TTAGTTCAGGCCATCTGGCTGCGGCTGGACGTTTATATGTGCCAGCCTACAAGCTCCATCTTTGACATTTaGACTGGTTATCTCATAGCT +
Preference number: 5 (lower is better)
Translates to: LVQAIWLRLDVYMCQPTSSIFDI*TGYLIA
Trigger: AGCTATGAGATAACCAGTCAAAATGTCAAAGATGGA...GCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCCCTGAATGAGCTGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAATCCATCTTTGACATTTaGACTGGTTATCTCATAGCT +
Preference number: 5 (lower is better)
Translates to: PLNELGSGPLSEWSVGIQSIFDI*TGYLIA
Trigger: AGCTATGAGATAACCAGTCAAAATGTCAAAGATGGA...TTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGCTCATTCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCTTAGCGAGTGGAGTGTaGGAATACAACTGTACAAAG +
Preference number: 5 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSLASGV*EYNCTK
Trigger: CTTTGTACAGTTGTATTCCAACACTCCACTCGCTAA...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGATGGCAAATGGTCATTTaGACACACACACACAGGGAA +
Preference number: 5 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRWQMVI*THTHRE
Trigger: TTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCCA...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTTGGCAAATGGTCATTTaGACACACACACACAGGGAA +
Preference number: 5 (lower is better)
Translates to: CPARIAASETLRTQHLSSWQMVI*THTHRE
Trigger: TTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCCA...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGTCCAGCAAGAATTGCTGCCTCTGAGACACTGAGGACTCAACATCTGTCATCTTCCTGGTGGTGGTTTTaGAAGCACATGTATATGGAG +
Preference number: 5 (lower is better)
Translates to: CPARIAASETLRTQHLSSSWWWF*KHMYME
Trigger: CTCCATATACATGTGCTTCAAAAACCACCACCAGGA...AGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAGCAATTCTTGCTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAAGACCCGGGCCCTTTATaGCTACATTTGCTACTTTGC +
Preference number: 5 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQDPGPL*LHLLLC
Trigger: GCAAAGTAGCAAATGTAGCAATAAAGGGCCCGGGTC...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACAACTGTACCAGCATGTTaGGTTCTGGGGTCCAATCCC +
Preference number: 5 (lower is better)
Translates to: YIHYLTARLANGHFDTHTTVPAC*VLGSNP
Trigger: GGGATTGGACCCCAGAACCAAACATGCTGGTACAGT...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTGTTGGCTGGGCTCTTaGCTCATCTCTATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: CRRLQGWVKCCLGCSISICWLGS*LISMSH
Trigger: GTGGGACATAGAGATGAGCAAAGAGCCCAGCCAACA...AATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp ACGTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTACCAGGCTTTCGGTCCTaGCTTGACAGTCTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: TYQNSPTTFAAEDYKVGLPGFRS*LDSLSF
Trigger: AAAAGACAGACTGTCAAGCAAGGACCGAAAGCCTGG...TAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp TATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGAACATGGTCTGAGATaGGAAAGATGTAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: YQNSPTTFAAEDYKVGLSEHGLR*ERCSPG
Trigger: CCCAGGGCTACATCTTTCCAATCTCAGACCATGTTC...ACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGGAACATGGTCTGAGATaGGAAAGATGTAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: GELLVIRLATIQLIPWSLEHGLR*ERCSPG
Trigger: CCCAGGGCTACATCTTTCCAATCTCAGACCATGTTC...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGTGTAGGCCCTCTGGAGTCTaGCTAAGTTTTCTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LQGWVKCCLGCSISISQCRPSGV*LSFLLH
Trigger: ATGAAGCAGAAAACTTAGCAAGACTCCAGAGGGCCT...ACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp TGGGTGGTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGACCGGTCAATCTTTACTaGTGCTTCTGCTTGCATAAA +
Preference number: 5 (lower is better)
Translates to: WVVLMSRLLASAVAMVTRPVNLY*CFCLHK
Trigger: TTTATGCAAGCAGAAGCACAAGTAAAGATTGACCGG...TCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TGGGATCAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGCCGGTCAATCTTTACTaGTGCTTCTGCTTGCATAAA +
Preference number: 5 (lower is better)
Translates to: WDQGLLASGVLEYNCTKKPVNLY*CFCLHK
Trigger: TTTATGCAAGCAGAAGCACAAGTAAAGATTGACCGG...CTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTCCGGTCAATCTTTACTaGTGCTTCTGCTTGCATAAA +
Preference number: 5 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFPVNLY*CFCLHK
Trigger: TTTATGCAAGCAGAAGCACAAGTAAAGATTGACCGG...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCTCACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGGACTTTTTAACCTTTaGTGGATTCTTCAAACGTCG +
Preference number: 5 (lower is better)
Translates to: PHSFSFTVTKSPRKETLSGLFNL*WILQTS
Trigger: CGACGTTTGAAGAATCCACAAAAGGTTAAAAAGTCC...GGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAATGGAGCCAGAAACTCTaGCCAGATTTCTTCTACCCT +
Preference number: 5 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQWSQKL*PDFFYP
Trigger: AGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCCA...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCATGGCAAATGGTCATTTaGACACACACACACAGGGAA +
Preference number: 5 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISWQMVI*THTHRE
Trigger: TTCCCTGTGTGTGTGTGTCAAAATGACCATTTGCCA...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCAATTTTCCAAATGTACTaGCATGACCAAGTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: HSFSFTVTKSPRKETLSAIFQMY*HDQVLR
Trigger: ACGCAGAACTTGGTCATGCAAGTACATTTGGAAAAT...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GTTGGAATACAACTGTACAAAGAAGAGAGGGCTGTAAACAGGAGCCTCCACCGGATTTTCCAAATGTACTaGCATGACCAAGTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: VGIQLYKEERAVNRSLHRIFQMY*HDQVLR
Trigger: ACGCAGAACTTGGTCATGCAAGTACATTTGGAAAAT...CCGGTGGAGGCTCCTGTTTACAGCCCTCTCTTCTTTGTACAGTTGTATTCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCAGTAGGGGAATTTGCTTaGCTACAGAATTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISVGEFA*LQNCLQ
Trigger: TTGCAGGCAATTCTGTAGCAAAGCAAATTCCCCTAC...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTATTGAGTAAACGATCATGTTaGGAGAACTCTCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: PAGEFGCMRKEIPAIALLSKRSC*ENSPLG
Trigger: ACCCAGAGGAGAGTTCTCCAAACATGATCGTTTACT...CAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000553530.5
CDS-3UTR CAA 90 bp CCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATCTCTCTGACTTCTCTTaGAACTTTCCAGTCTGGACC +
Preference number: 5 (lower is better)
Translates to: PTTFAAEDYKVGLSVVLDLSDFS*NFPVWT
Trigger: GGTCCAGACTGGAAAGTTCAAAGAGAAGTCAGAGAG...ATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp TCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGTTGAAGTCCTCAGACTaGAAGCTCTCTGACTTCTCT +
Preference number: 5 (lower is better)
Translates to: SPTTFAAEDYKVGLSVVLLKSSD*KLSDFS
Trigger: AGAGAAGTCAGAGAGCTTCAAGTCTGAGGACTTCAA...CAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS CCA 90 bp TTGTTTCAAAGGTTGCTGAAAATCGGGAAAATTGTCTGTGGTTATTaGGGAATTAACGAGTCTTTGCCACCTGCTGGTATCTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: LFQRLLKIGKIVCGY*GINESLPPAGISRS
Trigger: GCTCCTGGAGATACCAGCAGGTGGCAAAGACTCGTTAATTCCCCAATAACCACAGACAATTTTCCCGATTTTCAGCAACCTTTGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555368.5
CDS-3UTR CAA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCACAGCCTTGCTTTATTTaGCATTGTCCTCTTACAGAG +
Preference number: 5 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISQPCFI*HCPLTE
Trigger: CTCTGTAAGAGGACAATGCAAAATAAAGCAAGGCTG...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGCACGTATCGGATATCCATTTCTGTaGTGTTCACACAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: RIMDASEPSSINQDRARIGYPFL*CSHSLA
Trigger: TGCCAGGCTGTGTGAACACAACAGAAATGGATATCC...GATACGTGCTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp GTCACCAGCTGGCGAATTTGGCTGCATGAGAAAAGAAATACCAGCGATCGCTTTGGACTTTTTAACCTTTaGTGGATTCTTCAAACGTCG +
Preference number: 5 (lower is better)
Translates to: VTSWRIWLHEKRNTSDRFGLFNL*WILQTS
Trigger: CGACGTTTGAAGAATCCACAAAAGGTTAAAAAGTCC...AAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GGTGAGTTATTAGTGATTCGTCTGGCCACTATTCAACTTATCCCATGGTCTTTGTGGAGCCAGAAACTCTaGCCAGATTTCTTCTACCCT +
Preference number: 5 (lower is better)
Translates to: GELLVIRLATIQLIPWSLWSQKL*PDFFYP
Trigger: AGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCTCCA...CAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CACTCTTTCTCCTTCACAGTGACCAAGTCTCCTCGTAAGGAAACTCTGTCCGCATCCATCTTTGACATTTaGACTGGTTATCTCATAGCT +
Preference number: 5 (lower is better)
Translates to: HSFSFTVTKSPRKETLSASIFDI*TGYLIA
Trigger: AGCTATGAGATAACCAGTCAAAATGTCAAAGATGGA...TGCGGACAGAGTTTCCTTACGAGGAGACTTGGTCACTGTGAAGGAGAAAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
ENST00000622468.4
CDS-3UTR CAA 90 bp CAGGGCCTCTTAGCGAGTGGAGTGTTGGAATACAACTGTACAAAGAAGAGAGGGTCCATCTTTGACATTTaGACTGGTTATCTCATAGCT +
Preference number: 5 (lower is better)
Translates to: QGLLASGVLEYNCTKKRGSIFDI*TGYLIA
Trigger: AGCTATGAGATAACCAGTCAAAATGTCAAAGATGGA...CCCTCTCTTCTTTGTACAGTTGTATTCCAACACTCCACTCGCTAAGAGGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp GAAGGTGTGACCGTCTCCAGACAGCGAGGGAGTGAGGATAATAATATAATCTCATTAGCGAGTGGAGTGTaGGAATACAACTGTACAAAG +
Preference number: 5 (lower is better)
Translates to: EGVTVSRQRGSEDNNIISLASGV*EYNCTK
Trigger: CTTTGTACAGTTGTATTCCAACACTCCACTCGCTAA...TGAGATTATATTATTATCCTCACTCCCTCGCTGTCTGGAGACGGTCACACCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000622468.4
CDS-3UTR CAA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAATGCTACATATTCAACTaGGGCAGCTCCTTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQCYIFN*GSSFLR
Trigger: CCTCAAAAAGGAGCTGCCCAAGTTGAATATGTAGCA...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACAGCTACATTTGCTACTTaGCTACTTTATGGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: YIHYLTARLANGHFDTHTATFAT*LLYGPW
Trigger: CCAGGGGCCATAAAGTAGCAAAGTAGCAAATGTAGC...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTTCTTTTTACTCGCTGTaGGCTGGGCTCTTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: YQNSPTTFAAEDYKVGLSSFYSL*AGLFAH
Trigger: ATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAGA...ACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp AGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCGCTTTCGGTCCTTGCTaGACAGTCTGTCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RRLQGWVKCCLGCSISISAFGPC*TVCLFF
Trigger: GAAGAAAAGACAGACTGTCAAGCAAGGACCGAAAGC...GGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp ATAGATCAAAGGAGGGTAGTCATAGCAAGTGGGGGAGTGAATGTCTGGATTCAACAGCCTTGCTTTATTTaGCATTGTCCTCTTACAGAG +
Preference number: 5 (lower is better)
Translates to: IDQRRVVIASGGVNVWIQQPCFI*HCPLTE
Trigger: CTCTGTAAGAGGACAATGCAAAATAAAGCAAGGCTG...TTGAATCCAGACATTCACTCCCCCACTTGCTATGACTACCCTCCTTTGATCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTCAGCCTTGCTTTATTTaGCATTGTCCTCTTACAGAG +
Preference number: 5 (lower is better)
Translates to: SEFPHHFCCRRLQGWVKCQPCFI*HCPLTE
Trigger: CTCTGTAAGAGGACAATGCAAAATAAAGCAAGGCTG...ACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp GTACTAATGAGTAGGTTGCTGGCATCTGCTGTTGCTATGGTTACACGAGCACAGTCCATCTTTGACATTTaGACTGGTTATCTCATAGCT +
Preference number: 5 (lower is better)
Translates to: VLMSRLLASAVAMVTRAQSIFDI*TGYLIA
Trigger: AGCTATGAGATAACCAGTCAAAATGTCAAAGATGGA...CTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACAATTATTGCTCTGGGTTaGAGTCCATCTGAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: YIHYLTARLANGHFDTHTIIALG*SPSEVS
Trigger: GGAGACTTCAGATGGACTCAAACCCAGAGCAATAAT...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp AATTATTTAGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGTCGCTGATCCAAGGGTaGGATGGCTCAGCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: NYLELWMPQNLLVLTRTESLIQG*DGSAGV
Trigger: AACACCAGCTGAGCCATCCAACCCTTGGATCAGCGA...CTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCTAAATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp AGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGCACGTATCGGGTTAAGTGTTGTCTaGGATGCTCCATCTCCATTT +
Preference number: 5 (lower is better)
Translates to: RIMDASEPSSINQDRARIGLSVV*DAPSPF
Trigger: AAATGGAGATGGAGCATCCAAGACAACACTTAACCC...GATACGTGCTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp AGAAGATTACAAGGTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCCGGTCAATCTTTACTaGTGCTTCTGCTTGCATAAA +
Preference number: 5 (lower is better)
Translates to: RRLQGWVKCCLGCSISISPVNLY*CFCLHK
Trigger: TTTATGCAAGCAGAAGCACAAGTAAAGATTGACCGG...GGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp GTATCAGAATTCCCCCACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGGGACTTTTTAACCTTTaGTGGATTCTTCAAACGTCG +
Preference number: 5 (lower is better)
Translates to: VSEFPHHFCCRRLQGWVKGLFNL*WILQTS
Trigger: CGACGTTTGAAGAATCCACAAAAGGTTAAAAAGTCC...CTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGTGGGGGAATTCTGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp GTTGGGTTAAGTGTTGTCTTGGATGCTCCATCTCCATTTCCCAGTGTAATGTGCTCCATCTTTGACATTTaGACTGGTTATCTCATAGCT +
Preference number: 5 (lower is better)
Translates to: VGLSVVLDAPSPFPSVMCSIFDI*TGYLIA
Trigger: AGCTATGAGATAACCAGTCAAAATGTCAAAGATGGA...GCACATTACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS-3UTR CAA 90 bp TACATACATTACCTCACAGCCAGGTTGGCAAATGGTCATTTTGACACACACACACTTATCCCATGGTCTTaGCTACATATTCAACTTGGG +
Preference number: 5 (lower is better)
Translates to: YIHYLTARLANGHFDTHTLIPWS*LHIQLG
Trigger: CCCAAGTTGAATATGTAGCAAAGACCATGGGATAAG...TGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000553525.6
ENST00000553530.5
ENST00000622468.4
CDS-3UTR CAA 90 bp TTATTTAGAATTATGGATGCCTCAGAACCTTCTAGTATTAACCAGGACAGAGCACTGCCAGTTCCAGCCTaGCTTTATTTTGCATTGTCC +
Preference number: 5 (lower is better)
Translates to: LFRIMDASEPSSINQDRALPVPA*LYFALS
Trigger: GGACAATGCAAAATAAAGCAAGGCTGGAACTGGCAG...TGCTCTGTCCTGGTTAATACTAGAAGGTTCTGAGGCATCCATAATTCTAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS CAA 90 bp CGCTCCGGGCTGGCCTGGCTCTCCGCGCTCCCAGGCGTTCGCCGCTaGCCCGCCTCTGCCCGCCCCGGTCGGCAAGGGTGCGCGGAGGTC +
Preference number: 6 (lower is better)
Translates to: RSGLAWLSALPGVRR*PASARPGRQGCAEV
Trigger: GACCTCCGCGCACCCTTGCCGACCGGGGCGGGCAGAGGCGGGCAAGCGGCGAACGCCTGGGAGCGCGGAGAGCCAGGCCAGCCCGGAGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS GCA 72 bp CGCTTGCCCGCCTCTGCCCGCCCCGGTCGGCAAGGGTaGGCGGAGGTCTGTCCGTTCCCTCGGCGCCTGGCG +
Preference number: 6 (lower is better)
Translates to: RLPASARPGRQG*AEVCPFPRRLA
Trigger: CGCCAGGCGCCGAGGGAACGGACAGACCTCCGCGCACCCTTGCCGACCGGGGCGGGCAGAGGCGGGCAAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS GCA 72 bp CTCCGCGCTCCCAGGCGTTCGCCGCTTGCCCGCCTCTaGCCGCCCCGGTCGGCAAGGGTGCGCGGAGGTCTG +
Preference number: 6 (lower is better)
Translates to: LRAPRRSPLARL*PPRSARVRGGL
Trigger: CAGACCTCCGCGCACCCTTGCCGACCGGGGCGGGCAGAGGCGGGCAAGCGGCGAACGCCTGGGAGCGCGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553525.6
CDS CCA 72 bp CTCCCCACAGCCTCGCCTCCTCTTTCCGAGTTTCCGTaGTGGCGAGCGCAGGGGCTCAGCGAGCGAAGAGCG +
Preference number: 6 (lower is better)
Translates to: LPTASPPLSEFP*WRAQGLSERRA
Trigger: CGCTCTTCGCTCGCTGAGCCCCTGCGCTCGCCACCACGGAAACTCGGAAAGAGGAGGCGAGGCTGTGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000555571.5
CDS CCA 72 bp CCCACAGCCTCGCCTCCTCTTTCCGAGTTTCCGTGGTaGCGAGCGCAGGGGCTCAGCGAGCGAAGAGCGAAG +
Preference number: 6 (lower is better)
Translates to: PTASPPLSEFPW*RAQGLSERRAK
Trigger: CTTCGCTCTTCGCTCGCTGAGCCCCTGCGCTCGCCACCACGGAAACTCGGAAAGAGGAGGCGAGGCTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000555571.5
CDS GCA 72 bp TGGATGCTCTTTCTCTGGCCCCCTCTGCTGCGGTGCTaGTGCTCCCCGGACAGGACTGAGGCAGGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: WMLFLWPPLLRC*CSPDRTEAGSV
Trigger: GACAGAGCCTGCCTCAGTCCTGTCCGGGGAGCAGCAGCACCGCAGCAGAGGGGGCCAGAGAAAGAGCATCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS GCA 72 bp CATTGGATGCTCTTTCTCTGGCCCCCTCTGCTGCGGTaGTGCTGCTCCCCGGACAGGACTGAGGCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: HWMLFLWPPLLR*CCSPDRTEAGS
Trigger: AGAGCCTGCCTCAGTCCTGTCCGGGGAGCAGCAGCACCGCAGCAGAGGGGGCCAGAGAAAGAGCATCCAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS GCA 72 bp ACTCCTGCCATTGGATGCTCTTTCTCTGGCCCCCTCTaGTGCGGTGCTGCTGCTCCCCGGACAGGACTGAGG +
Preference number: 6 (lower is better)
Translates to: TPAIGCSFSGPL*CGAAAPRTGLR
Trigger: CCTCAGTCCTGTCCGGGGAGCAGCAGCACCGCAGCAGAGGGGGCCAGAGAAAGAGCATCCAATGGCAGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS CAA 72 bp AACGGTCAGGAGGACTGCATCAGGCCCGTGAGGCGCTaGCCCGCCAGCGACTTTCCCACACTGCGAGTGAAC +
Preference number: 6 (lower is better)
Translates to: NGQEDCIRPVRR*PASDFPTLRVN
Trigger: GTTCACTCGCAGTGTGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343854.10
ENST00000553525.6
ENST00000554300.1
ENST00000556437.5
ENST00000622468.4
CDS CAA 72 bp AACGGTCAGGAGGACTGCATCAGGCCCGTGAGGCGCTaGCCCGCCAGCGACTTTCCCTTCTTCTTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: NGQEDCIRPVRR*PASDFPFFLAS
Trigger: GCTGGCCAAGAAGAAGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402788.6
ENST00000553530.5
CDS GCA 72 bp GCAGTGCTGTCGCCTTGCCAGACTCCTGCCATTGGATaGTCTTTCTCTGGCCCCCTCTGCTGCGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: AVLSPCQTPAIG*SFSGPLCCGAA
Trigger: AGCAGCACCGCAGCAGAGGGGGCCAGAGAAAGAGCATCCAATGGCAGGAGTCTGGCAAGGCGACAGCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS CCA 72 bp GTGGCAGCTTCTTGGTGTGCGGAGCCACACGGCCATTaGCAAAGCAGCCATGAAGATAGACCAGGCACCCGC +
Preference number: 6 (lower is better)
Translates to: VAASWCAEPHGH*QSSHEDRPGTR
Trigger: GCGGGTGCCTGGTCTATCTTCATGGCTGCTTTGCCAATGGCCGTGTGGCTCCGCACACCAAGAAGCTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS CAA 72 bp CCAGAAGCCTTGACTCTGACAGCCCGTGGCAGCTTCTaGGTGTGCGGAGCCACACGGCCATTGGCAAAGCAG +
Preference number: 6 (lower is better)
Translates to: PEALTLTARGSF*VCGATRPLAKQ
Trigger: CTGCTTTGCCAATGGCCGTGTGGCTCCGCACACCAAGAAGCTGCCACGGGCTGTCAGAGTCAAGGCTTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS CCA 72 bp GAAGGAAGTCCCAGAAGCCTTGACTCTGACAGCCCGTaGCAGCTTCTTGGTGTGCGGAGCCACACGGCCATT +
Preference number: 6 (lower is better)
Translates to: EGSPRSLDSDSP*QLLGVRSHTAI
Trigger: AATGGCCGTGTGGCTCCGCACACCAAGAAGCTGCCACGGGCTGTCAGAGTCAAGGCTTCTGGGACTTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS CAA 72 bp CAGTCTGGACCACAGGCAGAGTTGGGTCTCCTCTCCTaGACCGTGACATTGGCAGTGCTGTCGCCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: QSGPQAELGLLS*TVTLAVLSPCQ
Trigger: CTGGCAAGGCGACAGCACTGCCAATGTCACGGTCAAGGAGAGGAGACCCAACTCTGCCTGTGGTCCAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS CAA 90 bp GTCCTTCTCTCAGGCCATCATGGAGTGAAGGAAGTCCCAGAAGCCTaGACTCTGACAGCCCGTGGCAGCTTCTTGGTGTGCGGAGCCACA +
Preference number: 6 (lower is better)
Translates to: VLLSGHHGVKEVPEA*TLTARGSFLVCGAT
Trigger: TGTGGCTCCGCACACCAAGAAGCTGCCACGGGCTGTCAGAGTCAAGGCTTCTGGGACTTCCTTCACTCCATGATGGCCTGAGAGAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS CAA 90 bp TCTGGACCACAGGCAGAGTTGGGTCTCCTCTCCTTGACCGTGACATaGGCAGTGCTGTCGCCTTGCCAGACTCCTGCCATTGGATGCTCT +
Preference number: 6 (lower is better)
Translates to: SGPQAELGLLSLTVT*AVLSPCQTPAIGCS
Trigger: AGAGCATCCAATGGCAGGAGTCTGGCAAGGCGACAGCACTGCCAATGTCACGGTCAAGGAGAGGAGACCCAACTCTGCCTGTGGTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS GCA 72 bp CTCTCCTTGACCGTGACATTGGCAGTGCTGTCGCCTTaGCAGACTCCTGCCATTGGATGCTCTTTCTCTGGC +
Preference number: 6 (lower is better)
Translates to: LSLTVTLAVLSP*QTPAIGCSFSG
Trigger: GCCAGAGAAAGAGCATCCAATGGCAGGAGTCTGGCAAGGCGACAGCACTGCCAATGTCACGGTCAAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS GCA 72 bp GTTTGGAGAACTCTCCTCTGGGTCAGCAACCCCCACTaGTCTTTGATCCCCGGATCCTTGAGCCATCCTGAG +
Preference number: 6 (lower is better)
Translates to: VWRTLLWVSNPH*SLIPGSLSHPE
Trigger: CTCAGGATGGCTCAAGGATCCGGGGATCAAAGAGCAGTGGGGGTTGCTGACCCAGAGGAGAGTTCTCCAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000555571.5
ENST00000556437.5
CDS CCA 72 bp GTCGGCATCTACGTGTCCTCTCAGGACCTTATGGAGTaGGAGAGTCCCACGGCCACCTCTTTCCTCATTTGG +
Preference number: 6 (lower is better)
Translates to: VGIYVSSQDLME*ESPTATSFLIW
Trigger: CCAAATGAGGAAAGAGGTGGCCGTGGGACTCTCCCACTCCATAAGGTCCTGAGAGGACACGTAGATGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS CAA 90 bp CTCCTCTGGGTCAGCAACCCCCACTGCTCTTTGATCCCCGGATCCTaGAGCCATCCTGAGTGTCTTCACTCACACTGCGATCACAACATC +
Preference number: 6 (lower is better)
Translates to: LLWVSNPHCSLIPGS*SHPECLHSHCDHNI
Trigger: GATGTTGTGATCGCAGTGTGAGTGAAGACACTCAGGATGGCTCAAGGATCCGGGGATCAAAGAGCAGTGGGGGTTGCTGACCCAGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
CDS GCA 72 bp GTCAGTACCTCAGTGATGAATACTTTCTCCCCTTGGTaGTCCACTGATGCTGGGACTAGAGCCGAGCCGTGG +
Preference number: 6 (lower is better)
Translates to: VSTSVMNTFSPW*STDAGTRAEPW
Trigger: CCACGGCTCGGCTCTAGTCCCAGCATCAGTGGAGCACCAAGGGGAGAAAGTATTCATCACTGAGGTACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553690.5
CDS CAA 72 bp GTCAGCAACCCCCACTGCTCTTTGATCCCCGGATCCTaGAGCCATCCTGAGTGTCTTCACTCACACTGCGAT +
Preference number: 6 (lower is better)
Translates to: VSNPHCSLIPGS*SHPECLHSHCD
Trigger: ATCGCAGTGTGAGTGAAGACACTCAGGATGGCTCAAGGATCCGGGGATCAAAGAGCAGTGGGGGTTGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
CDS CAA 72 bp GGCAGAAACAGTCTGTTGGCTGAAAGCAGAAGTGATTaGGGCATGAACCGGTGTCCTTGCTCGAGGCCGGCA +
Preference number: 6 (lower is better)
Translates to: GRNSLLAESRSD*GMNRCPCSRPA
Trigger: TGCCGGCCTCGAGCAAGGACACCGGTTCATGCCCAAATCACTTCTGCTTTCAGCCAACAGACTGTTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553690.5
CDS CAA 72 bp GACCTGCACCCATCCCACACAAGTCCACACGCCAGCTaGCCTAACCACTTATGTAAGCTCGTGCTTCCACAG +
Preference number: 6 (lower is better)
Translates to: DLHPSHTSPHAS*PNHLCKLVLPQ
Trigger: CTGTGGAAGCACGAGCTTACATAAGTGGTTAGGCAAGCTGGCGTGTGGACTTGTGTGGGATGGGTGCAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553530.5
CDS CAA 72 bp ATCCTGCTGGGCCTAGTGAACCTTCTGAGGTCTTCCTaGGACTCAGGGCAACTGCCAGAGACAAGAGCTCTC +
Preference number: 6 (lower is better)
Translates to: ILLGLVNLLRSS*DSGQLPETRAL
Trigger: GAGAGCTCTTGTCTCTGGCAGTTGCCCTGAGTCCAAGGAAGACCTCAGAAGGTTCACTAGGCCCAGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS CAA 90 bp AAGTGGTGGATCCTGCTGGGCCTAGTGAACCTTCTGAGGTCTTCCTaGGACTCAGGGCAACTGCCAGAGACAAGAGCTCTCGAGATGAAC +
Preference number: 6 (lower is better)
Translates to: KWWILLGLVNLLRSS*DSGQLPETRALEMN
Trigger: GTTCATCTCGAGAGCTCTTGTCTCTGGCAGTTGCCCTGAGTCCAAGGAAGACCTCAGAAGGTTCACTAGGCCCAGCAGGATCCACCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS TCA 72 bp CCACTGCTCTTTGATCCCCGGATCCTTGAGCCATCCTaGGTGTCTTCACTCACACTGCGATCACAACATCGG +
Preference number: 6 (lower is better)
Translates to: PLLFDPRILEPS*VSSLTLRSQHR
Trigger: CCGATGTTGTGATCGCAGTGTGAGTGAAGACACTCAGGATGGCTCAAGGATCCGGGGATCAAAGAGCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
CDS GCA 72 bp ACCTGCACCCATCCCACACAAGTCCACACGCCAGCTTaGCTAACCACTTATGTAAGCTCGTGCTTCCACAGT +
Preference number: 6 (lower is better)
Translates to: TCTHPTQVHTPA*LTTYVSSCFHS
Trigger: ACTGTGGAAGCACGAGCTTACATAAGTGGTTAGGCAAGCTGGCGTGTGGACTTGTGTGGGATGGGTGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553530.5
CDS CCA 72 bp GAGTGGGAGAGTCCCACGGCCACCTCTTTCCTCATTTaGTCCTCCAGCTTGGAATATTCTCTCTCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: EWESPTATSFLI*SSSLEYSLSCF
Trigger: GAAGCAGGAGAGAGAATATTCCAAGCTGGAGGACCAAATGAGGAAAGAGGTGGCCGTGGGACTCTCCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS CAA 72 bp GTCAGCAACCCCCACTGCTCTTTGATCCCCGGATCCTaGAGCCATCCTGAGTGTCTTCACTCACACTTAGCA +
Preference number: 6 (lower is better)
Translates to: VSNPHCSLIPGS*SHPECLHSHLA
Trigger: TGCTAAGTGTGAGTGAAGACACTCAGGATGGCTCAAGGATCCGGGGATCAAAGAGCAGTGGGGGTTGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000555571.5
CDS CAA 72 bp GGAGTGGGAGAGTCCCACGGCCACCTCTTTCCTCATTaGGTCCTCCAGCTTGGAATATTCTCTCTCCTGCTT +
Preference number: 6 (lower is better)
Translates to: GVGESHGHLFPH*VLQLGIFSLLL
Trigger: AAGCAGGAGAGAGAATATTCCAAGCTGGAGGACCAAATGAGGAAAGAGGTGGCCGTGGGACTCTCCCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS CAA 90 bp CTCCTCTGGGTCAGCAACCCCCACTGCTCTTTGATCCCCGGATCCTaGAGCCATCCTGAGTGTCTTCACTCACACTTAGCAACCAAAGAA +
Preference number: 6 (lower is better)
Translates to: LLWVSNPHCSLIPGS*SHPECLHSHLATKE
Trigger: TTCTTTGGTTGCTAAGTGTGAGTGAAGACACTCAGGATGGCTCAAGGATCCGGGGATCAAAGAGCAGTGGGGGTTGCTGACCCAGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000555571.5
CDS TCA 72 bp ACAGTCTGTTGGCTGAAAGCAGAAGTGATTTGGGCATaGACCGGTGTCCTTGCTCGAGGCCGGCATTCCTTT +
Preference number: 6 (lower is better)
Translates to: TVCWLKAEVIWA*TGVLARGRHSF
Trigger: AAAGGAATGCCGGCCTCGAGCAAGGACACCGGTTCATGCCCAAATCACTTCTGCTTTCAGCCAACAGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553690.5
CDS TCA 72 bp GTCGGTGTGCGCTTCACACCCAGAAACCCAGGAACATaGTTTATATGCAGACCTGCACCCATCCCACACAAG +
Preference number: 6 (lower is better)
Translates to: VGVRFTPRNPGT*FICRPAPIPHK
Trigger: CTTGTGTGGGATGGGTGCAGGTCTGCATATAAATCATGTTCCTGGGTTTCTGGGTGTGAAGCGCACACCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553530.5
ENST00000554474.5
CDS GCA 72 bp ACCCAGAAACCCAGGAACATGATTTATATGCAGACCTaGACCCATCCCACACAAGTCCACACGCCAGCTTGC +
Preference number: 6 (lower is better)
Translates to: TQKPRNMIYMQT*THPTQVHTPAC
Trigger: GCAAGCTGGCGTGTGGACTTGTGTGGGATGGGTGCAGGTCTGCATATAAATCATGTTCCTGGGTTTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553530.5
ENST00000554474.5
CDS CCA 72 bp ATTGGTTGGCTGAGTACATGCACCGGGCTCTGTGCCTaGGACTCTTCAGTCACGCCATACACGGACTTTTTA +
Preference number: 6 (lower is better)
Translates to: IGWLSTCTGLCA*DSSVTPYTDFL
Trigger: TAAAAAGTCCGTGTATGGCGTGACTGAAGAGTCCCAGGCACAGAGCCCGGTGCATGTACTCAGCCAACCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000343854.10
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554734.1
ENST00000554782.1
ENST00000555368.5
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS CCA 72 bp GACTCCAGGAATCGTAGAAACTGGTCCCGCCCCACCTaGTCCTTCAATATCTCATCGAAAGAGAAGCCCCAT +
Preference number: 6 (lower is better)
Translates to: DSRNRRNWSRPT*SFNISSKEKPH
Trigger: ATGGGGCTTCTCTTTCGATGAGATATTGAAGGACCAGGTGGGGCGGGACCAGTTTCTACGATTCCTGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000343854.10
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554782.1
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS CCA 72 bp AATGTCAGTACCTCAGTGATGAATACTTTCTCCCCTTaGTGCTCCACTGATGCTGGGACTAGAGCCGAGCCG +
Preference number: 6 (lower is better)
Translates to: NVSTSVMNTFSP*CSTDAGTRAEP
Trigger: CGGCTCGGCTCTAGTCCCAGCATCAGTGGAGCACCAAGGGGAGAAAGTATTCATCACTGAGGTACTGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553690.5
CDS CAA 72 bp GCTTCTTCTTGGCCAGCAGCAAATCCTGGTAAGCATTaGACCGGAGGAAGCGGGCATAGCTGTCACTCTTCA +
Preference number: 6 (lower is better)
Translates to: ASSWPAANPGKH*TGGSGHSCHSS
Trigger: TGAAGAGTGACAGCTATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGATTTGCTGCTGGCCAAGAAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343854.10
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000554782.1
ENST00000556437.5
ENST00000622468.4
CDS CAA 72 bp CCTTCTTCTTGGCCAGCAGCAAATCCTGGTAAGCATTaGACCGGAGGAAGCGGGCATAGCTGTCACTCTTCA +
Preference number: 6 (lower is better)
Translates to: PSSWPAANPGKH*TGGSGHSCHSS
Trigger: TGAAGAGTGACAGCTATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGATTTGCTGCTGGCCAAGAAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355512.10
ENST00000402788.6
ENST00000553530.5
ENST00000555571.5
CDS CAA 90 bp GTAGCCACACCTTCTTCTTGGCCAGCAGCAAATCCTGGTAAGCATTaGACCGGAGGAAGCGGGCATAGCTGTCACTCTTCATCAGCTTGT +
Preference number: 6 (lower is better)
Translates to: VATPSSWPAANPGKH*TGGSGHSCHSSSAC
Trigger: ACAAGCTGATGAAGAGTGACAGCTATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGATTTGCTGCTGGCCAAGAAGAAGGTGTGGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355512.10
CDS CAA 90 bp GGACCTTATGGAGTGGGAGAGTCCCACGGCCACCTCTTTCCTCATTaGGTCCTCCAGCTTGGAATATTCTCTCTCCTGCTTCTTCGTCTA +
Preference number: 6 (lower is better)
Translates to: GPYGVGESHGHLFPH*VLQLGIFSLLLLRL
Trigger: TAGACGAAGAAGCAGGAGAGAGAATATTCCAAGCTGGAGGACCAAATGAGGAAAGAGGTGGCCGTGGGACTCTCCCACTCCATAAGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS CAA 90 bp CACTTTCTGGCTTCTTCTTGGCCAGCAGCAAATCCTGGTAAGCATTaGACCGGAGGAAGCGGGCATAGCTGTCACTCTTCATCAGCTTGT +
Preference number: 6 (lower is better)
Translates to: HFLASSWPAANPGKH*TGGSGHSCHSSSAC
Trigger: ACAAGCTGATGAAGAGTGACAGCTATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGATTTGCTGCTGGCCAAGAAGAAGCCAGAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343854.10
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000554782.1
ENST00000556437.5
ENST00000622468.4
CDS CAA 90 bp CCATCTTTTGGCAGAAACAGTCTGTTGGCTGAAAGCAGAAGTGATTaGGGCATGAACCGGTGTCCTTGCTCGAGGCCGGCATTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: PSFGRNSLLAESRSD*GMNRCPCSRPAFLS
Trigger: AGAAAGGAATGCCGGCCTCGAGCAAGGACACCGGTTCATGCCCAAATCACTTCTGCTTTCAGCCAACAGACTGTTTCTGCCAAAAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553690.5
CDS TCA 72 bp ACTCAGGGCAACTGCCAGAGACAAGAGCTCTCGAGATaGACCTGGTGCCCCACTGTGTTCTCTTTTAATTGC +
Preference number: 6 (lower is better)
Translates to: TQGNCQRQELSR*TWCPTVFSFNC
Trigger: GCAATTAAAAGAGAACACAGTGGGGCACCAGGTTCATCTCGAGAGCTCTTGTCTCTGGCAGTTGCCCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS GCA 72 bp TCTTTTGTTGTTTTCCTGATTGGTTGGCTGAGTACATaGACCGGGCTCTGTGCCTGGGACTCTTCAGTCACG +
Preference number: 6 (lower is better)
Translates to: SFVVFLIGWLST*TGLCAWDSSVT
Trigger: CGTGACTGAAGAGTCCCAGGCACAGAGCCCGGTGCATGTACTCAGCCAACCAATCAGGAAAACAACAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000343854.10
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554734.1
ENST00000554782.1
ENST00000555368.5
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS CCA 72 bp TCTGAACTGAATTCGGACTCCAGGAATCGTAGAAACTaGTCCCGCCCCACCTGGTCCTTCAATATCTCATCG +
Preference number: 6 (lower is better)
Translates to: SELNSDSRNRRN*SRPTWSFNISS
Trigger: CGATGAGATATTGAAGGACCAGGTGGGGCGGGACCAGTTTCTACGATTCCTGGAGTCCGAATTCAGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000343854.10
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554782.1
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS CCA 72 bp GTCTTCACTCACACTGCGATCACAACATCGGAAGACTaGAAGTATCTAAAAGCGCCATCCTCTGCGCTCTCG +
Preference number: 6 (lower is better)
Translates to: VFTHTAITTSED*KYLKAPSSALS
Trigger: CGAGAGCGCAGAGGATGGCGCTTTTAGATACTTCCAGTCTTCCGATGTTGTGATCGCAGTGTGAGTGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553530.5
ENST00000554474.5
ENST00000556437.5
CDS CAA 72 bp CTCCCTCTGGCTCCAGAATTTTTCCTAAAGCCAACCTaGCGCCAGGTTCATGATAAAGCTGGAGAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: LPLAPEFFLKPT*RQVHDKAGEAQ
Trigger: CTGGGCTTCTCCAGCTTTATCATGAACCTGGCGCAAGGTTGGCTTTAGGAAAAATTCTGGAGCCAGAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000555571.5
CDS CAA 72 bp TCTTCTTCTTGGCCAGCAGCAAATCCTGGTAAGCATTaGACCGGAGGAAGCGGGCATAGCTGTCACTCTTCA +
Preference number: 6 (lower is better)
Translates to: SSSWPAANPGKH*TGGSGHSCHSS
Trigger: TGAAGAGTGACAGCTATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGATTTGCTGCTGGCCAAGAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS CAA 90 bp TGGGAGAGTCCCACGGCCACCTCTTTCCTCATTTGGTCCTCCAGCTaGGAATATTCTCTCTCCTGCTTCTTCGTCTACTATTATCCTGTG +
Preference number: 6 (lower is better)
Translates to: WESPTATSFLIWSSS*EYSLSCFFVYYYPV
Trigger: CACAGGATAATAGTAGACGAAGAAGCAGGAGAGAGAATATTCCAAGCTGGAGGACCAAATGAGGAAAGAGGTGGCCGTGGGACTCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS CAA 90 bp TGCTCACTTTCTTCTTCTTGGCCAGCAGCAAATCCTGGTAAGCATTaGACCGGAGGAAGCGGGCATAGCTGTCACTCTTCATCAGCTTGT +
Preference number: 6 (lower is better)
Translates to: CSLSSSWPAANPGKH*TGGSGHSCHSSSAC
Trigger: ACAAGCTGATGAAGAGTGACAGCTATGCCCGCTTCCTCCGGTCAAATGCTTACCAGGATTTGCTGCTGGCCAAGAAGAAGAAAGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554474.5
CDS TCA 72 bp TGCTCATCTCTATGTCCCACAAAGCAACGTCATCGCTaGTCCAAGGGTTGGATGGCTCAGCTGGTGTTATCA +
Preference number: 6 (lower is better)
Translates to: CSSLCPTKQRHR*SKGWMAQLVLS
Trigger: TGATAACACCAGCTGAGCCATCCAACCCTTGGATCAGCGATGACGTTGCTTTGTGGGACATAGAGATGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554782.1
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS GCA 72 bp TTGCTGTTTAAAATGGCCCCAAGGACAGTGCTGAAGTaGTGTTCACCATTCTCTGATGTGCCACAGGCCTGT +
Preference number: 6 (lower is better)
Translates to: LLFKMAPRTVLK*CSPFSDVPQAC
Trigger: ACAGGCCTGTGGCACATCAGAGAATGGTGAACAGCACTTCAGCACTGTCCTTGGGGCCATTTTAAACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553690.5
CDS CCA 72 bp CCACAAAGCAACGTCATCGCTGATCCAAGGGTTGGATaGCTCAGCTGGTGTTATCAAAGGGTCATATTCCAC +
Preference number: 6 (lower is better)
Translates to: PQSNVIADPRVG*LSWCYQRVIFH
Trigger: GTGGAATATGACCCTTTGATAACACCAGCTGAGCCATCCAACCCTTGGATCAGCGATGACGTTGCTTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554782.1
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS TCA 72 bp CCACTGCTCTTTGATCCCCGGATCCTTGAGCCATCCTaGGTGTCTTCACTCACACTTAGCAACCAAAGAATT +
Preference number: 6 (lower is better)
Translates to: PLLFDPRILEPS*VSSLTLSNQRI
Trigger: AATTCTTTGGTTGCTAAGTGTGAGTGAAGACACTCAGGATGGCTCAAGGATCCGGGGATCAAAGAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000555571.5
CDS GCA 72 bp CAGGACTCCTCTTCCAGTGGGGAGTGCTTCATAATCTaGCAGTTCCAGCCTTGCTTTATTTTGCATTGTCCT +
Preference number: 6 (lower is better)
Translates to: QDSSSSGECFII*QFQPCFILHCP
Trigger: AGGACAATGCAAAATAAAGCAAGGCTGGAACTGGCAGATTATGAAGCACTCCCCACTGGAAGAGGAGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555368.5
CDS CCA 72 bp CACACACAGCACTTAAAAGGTTCAATCACCCACAGCTaGGTTCCACTGTGGTTTCCAGGAACTCAAAGCTTG +
Preference number: 6 (lower is better)
Translates to: HTQHLKGSITHS*VPLWFPGTQSL
Trigger: CAAGCTTTGAGTTCCTGGAAACCACAGTGGAACCCAGCTGTGGGTGATTGAACCTTTTAAGTGCTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554734.1
CDS CAA 72 bp TGCACAATGTCAGTACCTGTGACGACACTGGGGATTTaGGAGAGAAAGCTCTTGACTGTTCTGATGGGCACA +
Preference number: 6 (lower is better)
Translates to: CTMSVPVTTLGI*ERKLLTVLMGT
Trigger: TGTGCCCATCAGAACAGTCAAGAGCTTTCTCTCCAAAATCCCCAGTGTCGTCACAGGTACTGACATTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000343854.10
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS CAA 72 bp ATGTCCCACAAAGCAACGTCATCGCTGATCCAAGGGTaGGATGGCTCAGCTGGTGTTATCAAAGGGTCATAT +
Preference number: 6 (lower is better)
Translates to: MSHKATSSLIQG*DGSAGVIKGSY
Trigger: ATATGACCCTTTGATAACACCAGCTGAGCCATCCAACCCTTGGATCAGCGATGACGTTGCTTTGTGGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554782.1
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS CAA 90 bp CTCATCTCTATGTCCCACAAAGCAACGTCATCGCTGATCCAAGGGTaGGATGGCTCAGCTGGTGTTATCAAAGGGTCATATTCCACATAT +
Preference number: 6 (lower is better)
Translates to: LISMSHKATSSLIQG*DGSAGVIKGSYSTY
Trigger: ATATGTGGAATATGACCCTTTGATAACACCAGCTGAGCCATCCAACCCTTGGATCAGCGATGACGTTGCTTTGTGGGACATAGAGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554782.1
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS CCA 72 bp TCATCGAAAGAGAAGCCCCATCTTTTTACTCGCTGTTaGCTGGGCTCTTTGCTTTCAGCCACTTTGGACATT +
Preference number: 6 (lower is better)
Translates to: SSKEKPHLFTRC*LGSLLSATLDI
Trigger: AATGTCCAAAGTGGCTGAAAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAGATGGGGCTTCTCTTTCGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343854.10
CDS CCA 72 bp AATGATGTCTTCAATTTTGCAGTAAACGATCATGTTTaGAGAACTCTCCTCTGGGTCAGCAACCCCCACTGC +
Preference number: 6 (lower is better)
Translates to: NDVFNFAVNDHV*RTLLWVSNPHC
Trigger: GCAGTGGGGGTTGCTGACCCAGAGGAGAGTTCTCCAAACATGATCGTTTACTGCAAAATTGAAGACATCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000355512.10
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000555571.5
ENST00000556437.5
CDS CCA 72 bp AACGTCATCGCTGATCCAAGGGTTGGATGGCTCAGCTaGTGTTATCAAAGGGTCATATTCCACATATTGTTC +
Preference number: 6 (lower is better)
Translates to: NVIADPRVGWLS*CYQRVIFHILF
Trigger: GAACAATATGTGGAATATGACCCTTTGATAACACCAGCTGAGCCATCCAACCCTTGGATCAGCGATGACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554782.1
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS CAA 90 bp GGTTTCCAGGAACTCAAAGCTTGCTCAATCTTCAGAGTTGAACATTaGAAAGGGTTTTTAAACTGGCCACGTCTCCTCCTGAGAGTGCAA +
Preference number: 6 (lower is better)
Translates to: GFQELKACSIFRVEH*KGFLNWPRLLLRVQ
Trigger: TTGCACTCTCAGGAGGAGACGTGGCCAGTTTAAAAACCCTTTCAAATGTTCAACTCTGAAGATTGAGCAAGCTTTGAGTTCCTGGAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554734.1
CDS CAA 72 bp AAGCTCTTGACTGTTCTGATGGGCACACCCCCTGTCTaGTCATCTTGCATCTTTGTAATGATGTCTTCAATC +
Preference number: 6 (lower is better)
Translates to: KLLTVLMGTPPV*SSCIFVMMSSI
Trigger: GATTGAAGACATCATTACAAAGATGCAAGATGACAAGACAGGGGGTGTGCCCATCAGAACAGTCAAGAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343854.10
ENST00000402788.6
ENST00000622468.4
CDS CAA 72 bp GTGTCTTCACTCACACTTAGCAACCAAAGAATTGCCTaGACTCTCCCTCTGGCTCCAGAATTTTTCCTAAAG +
Preference number: 6 (lower is better)
Translates to: VSSLTLSNQRIA*TLPLAPEFFLK
Trigger: CTTTAGGAAAAATTCTGGAGCCAGAGGGAGAGTCAAGGCAATTCTTTGGTTGCTAAGTGTGAGTGAAGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553525.6
ENST00000555571.5
CDS CAA 72 bp CGGATATCCATTTCTGTTGTGTTCACACAGCCTGGCTaGAGTAGCCTGATATGTGTGTTTCCCACTGAAATT +
Preference number: 6 (lower is better)
Translates to: RISISVVFTQPG*SSLICVFPTEI
Trigger: AATTTCAGTGGGAAACACACATATCAGGCTACTCAAGCCAGGCTGTGTGAACACAACAGAAATGGATATCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554734.1
CDS CAA 72 bp GACTGTTCTGATGGGCACACCCCCTGTCTTGTCATCTaGCATCTTTGTAATGATGTCTTCAATTTTGCAGTA +
Preference number: 6 (lower is better)
Translates to: DCSDGHTPCLVI*HLCNDVFNFAV
Trigger: TACTGCAAAATTGAAGACATCATTACAAAGATGCAAGATGACAAGACAGGGGGTGTGCCCATCAGAACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000355512.10
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000555571.5
ENST00000556437.5
CDS CAA 72 bp AAGCTCTTGACTGTTCTGATGGGCACACCCCCTGTCTaGTCATCTTGCATCTTTGTAATGATGTCTTCAATT +
Preference number: 6 (lower is better)
Translates to: KLLTVLMGTPPV*SSCIFVMMSSI
Trigger: AATTGAAGACATCATTACAAAGATGCAAGATGACAAGACAGGGGGTGTGCCCATCAGAACAGTCAAGAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000355512.10
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000555571.5
ENST00000556437.5
CDS CAA 90 bp ACCACTTTTGCTGCAGAAGATTACAAGGTTGGGTTAAGTGTTGTCTaGGATGCTCCATCTCCATTTCCCAGTGTAATGTGCTATGATGTT +
Preference number: 6 (lower is better)
Translates to: TTFAAEDYKVGLSVV*DAPSPFPSVMCYDV
Trigger: AACATCATAGCACATTACACTGGGAAATGGAGATGGAGCATCCAAGACAACACTTAACCCAACCTTGTAATCTTCTGCAGCAAAAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434263.6
CDS TCA 72 bp GAATGCAACTCACACAGCACTTGTTTCAAAGGTTGCTaGAAATCGGGAAAATTGTCTGTGGTTATTGGGGAA +
Preference number: 6 (lower is better)
Translates to: ECNSHSTCFKGC*KSGKLSVVIGE
Trigger: TTCCCCAATAACCACAGACAATTTTCCCGATTTTCAGCAACCTTTGAAACAAGTGCTGTGTGAGTTGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555368.5
CDS GCA 72 bp CTCATTTGGTCCTCCAGCTTGGAATATTCTCTCTCCTaGTTCTTCGTCTACTATTATCCTGTGTATTCTTCA +
Preference number: 6 (lower is better)
Translates to: LIWSSSLEYSLS*FFVYYYPVYSS
Trigger: TGAAGAATACACAGGATAATAGTAGACGAAGAAGCAGGAGAGAGAATATTCCAAGCTGGAGGACCAAATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553519.1
CDS CAA 72 bp CATAATCTGCCAGTTCCAGCCTTGCTTTATTTTGCATaGTCCTCTTACAGAGATAGATGGCATAGTCAGTGT +
Preference number: 6 (lower is better)
Translates to: HNLPVPALLYFA*SSYRDRWHSQC
Trigger: ACACTGACTATGCCATCTATCTCTGTAAGAGGACAATGCAAAATAAAGCAAGGCTGGAACTGGCAGATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000343854.10
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000555368.5
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS CAA 72 bp CATAATCTGCCAGTTCCAGCCTTGCTTTATTTTGCATaGTCCTCTTACAGAGATAGATGGCTTTCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: HNLPVPALLYFA*SSYRDRWLSFF
Trigger: GAAGAAGGAAAGCCATCTATCTCTGTAAGAGGACAATGCAAAATAAAGCAAGGCTGGAACTGGCAGATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553690.5
ENST00000554782.1
CDS CAA 90 bp AAAGCTCTTGACTGTTCTGATGGGCACACCCCCTGTCTTGTCATCTaGCATCTTTGTAATGATGTCTTCAATTTTGCAGTAAACGATCAT +
Preference number: 6 (lower is better)
Translates to: KALDCSDGHTPCLVI*HLCNDVFNFAVNDH
Trigger: ATGATCGTTTACTGCAAAATTGAAGACATCATTACAAAGATGCAAGATGACAAGACAGGGGGTGTGCCCATCAGAACAGTCAAGAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000355512.10
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000555571.5
ENST00000556437.5
CDS GCA 72 bp CACTTTGGACATTTTCAAACAATGTCTGTCGATCTGTaGGTTCAAAAATGTTATCTGTTTCCGGATGTCCTC +
Preference number: 6 (lower is better)
Translates to: HFGHFQTMSVDL*VQKCYLFPDVL
Trigger: GAGGACATCCGGAAACAGATAACATTTTTGAACGCACAGATCGACAGACATTGTTTGAAAATGTCCAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000343854.10
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554782.1
ENST00000555368.5
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4
CDS CAA 72 bp ACAAGAATGCAACTCACACAGCACTTGTTTCAAAGGTaGCTGAAAATCGGGAAAATTGTCTGTGGTTATTGG +
Preference number: 6 (lower is better)
Translates to: TRMQLTQHLFQR*LKIGKIVCGYW
Trigger: CCAATAACCACAGACAATTTTCCCGATTTTCAGCAACCTTTGAAACAAGTGCTGTGTGAGTTGCATTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555368.5
CDS CAA 72 bp GTCTTCAAATGTATATCTCCCTCCATCTTTGACATTTaGACTGGTTATCTCATAGCTGTGAGAATCCAGGTT +
Preference number: 6 (lower is better)
Translates to: VFKCISPSIFDI*TGYLIAVRIQV
Trigger: AACCTGGATTCTCACAGCTATGAGATAACCAGTCAAAATGTCAAAGATGGAGGGAGATATACATTTGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000343854.10
ENST00000355512.10
ENST00000402788.6
ENST00000404301.6
ENST00000406236.8
ENST00000407322.8
ENST00000434263.6
ENST00000553525.6
ENST00000553530.5
ENST00000554474.5
ENST00000554782.1
ENST00000555571.5
ENST00000556437.5
ENST00000622468.4