RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RGS4 (Homo sapiens)

Ensembl gene IDs: ENSG00000117152

Ensembl transcript IDs: ENST00000367906.7, ENST00000367908.8, ENST00000367909.11, ENST00000421743.6, ENST00000491263.1, ENST00000527393.5, ENST00000527809.5, ENST00000528938.1, ENST00000531057.5, ENST00000533019.1

Found 452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGAACGTGCTGGCCAACAGAATACATGTGCATGTGGATGTCATGTaGCATGCACTAACCAACCATCCCGAGGTAAAACTGTTGGGAGGA +
Preference number: 1 (lower is better)
Translates to: ENVLANRIHVHVDVM*HALTNHPEVKLLGG
Trigger: TCCTCCCAACAGTTTTACCTCGGGATGGTTGGTTAGTGCATGTCACATGACATCCACATGCACATGTATTCTGTTGGCCAGCACGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR GCA 90 bp CGTGCTGGCCAACAGAATACATGTGCATGTGGATGTCATGTGACATaGACTAACCAACCATCCCGAGGTAAAACTGTTGGGAGGAGGAAA +
Preference number: 1 (lower is better)
Translates to: RAGQQNTCACGCHVT*TNQPSRGKTVGRRK
Trigger: TTTCCTCCTCCCAACAGTTTTACCTCGGGATGGTTGGTTAGTGCATGTCACATGACATCCACATGCACATGTATTCTGTTGGCCAGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR CCA 90 bp GCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATaGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATATCT +
Preference number: 1 (lower is better)
Translates to: APMEPSKKLRKIGLE*GPTLMNTQTPKAIS
Trigger: AGATATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR GCA 90 bp AGGTGGAGGCTGTCAGTGGTCAAATCAAGCATGAAGTTCCTTGGATaGTTCTCCAGCAAGATCCATGGAATTTTACAAAACCAACTTTCC +
Preference number: 1 (lower is better)
Translates to: RWRLSVVKSSMKFLG*FSSKIHGILQNQLS
Trigger: GGAAAGTTGGTTTTGTAAAATTCCATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCATGCTTGATTTGACCACTGACAGCCTCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR CCA 90 bp CTCAAGGTGGAGGCTGTCAGTGGTCAAATCAAGCATGAAGTTCCTTaGATGCTTCTCCAGCAAGATCCATGGAATTTTACAAAACCAACT +
Preference number: 1 (lower is better)
Translates to: LKVEAVSGQIKHEVP*MLLQQDPWNFTKPT
Trigger: AGTTGGTTTTGTAAAATTCCATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCATGCTTGATTTGACCACTGACAGCCTCCACCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR CCA 90 bp GCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTaGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCT +
Preference number: 1 (lower is better)
Translates to: ATMWIKHWSLIQINI*PQVFQSIESWHFIP
Trigger: AGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
3UTR GCA 90 bp ATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCGTGTGTGTaGACTTTGAAAGGCAGTAGTTTTAGAAGAATGAGAAGAAAATTA +
Preference number: 1 (lower is better)
Translates to: IYTGATNAVYVDACV*TLKGSSFRRMRRKL
Trigger: TAATTTTCTTCTCATTCTTCTAAAACTACTGCCTTTCAAAGTGCACACACACGCGTCCACATACACTGCATTCGTTGCTCCAGTATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR CCA 90 bp CAAATCAAGCATGAAGTTCCTTGGATGCTTCTCCAGCAAGATCCATaGAATTTTACAAAACCAACTTTCCACAGGTTAGCATTTCTTTCT +
Preference number: 1 (lower is better)
Translates to: QIKHEVPWMLLQQDP*NFTKPTFHRLAFLS
Trigger: AGAAAGAAATGCTAACCTGTGGAAAGTTGGTTTTGTAAAATTCCATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCATGCTTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR TCA 90 bp CAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCTGTATTTCTTCACCCTCTGCCTTCAGGTaGGAATTAGGCACACTGAGG +
Preference number: 2 (lower is better)
Translates to: QPVTYGRCCWQGLSCISSPSAFR*ELGTLR
Trigger: CCTCAGTGTGCCTAATTCTCACCTGAAGGCAGAGGG...TGAAGAAATACAGCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367908.8
3UTR-3UTR TCA 90 bp GTCTGCCAACTCCATACCAACCCAGCTGCTAATAAGCATGCCCTGAGCACCCAGACTGCCAACAATCTTTaGAAATCCAGACCTACCAGG +
Preference number: 2 (lower is better)
Translates to: VCQLHTNPAANKHALSTQTANNL*KSRPTR
Trigger: CCTGGTAGGTCTGGATTTTCAAAGATTGTTGGCAGT...CTGGGTGCTCAGGGCATGCTTATTAGCAGCTGGGTTGGTATGGAGTTGGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR TCA 90 bp CAACTCCATACCAACCCAGCTGCTAATAAGCATGCCCTGAGCACCCAGGAAAAGCCTTCTCCATCAGGTTaGAAATCTTCTTCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: QLHTNPAANKHALSTQEKPSPSG*KSSSGP
Trigger: AGGCCCAGAAGAAGATTTTCAACCTGATGGAGAAGG...CTTTTCCTGGGTGCTCAGGGCATGCTTATTAGCAGCTGGGTTGGTATGGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367908.8
3UTR-3UTR GCA 90 bp CTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCATCCTTTCTGCTTTTCTaGCCCACAGCTGGACGGGTT +
Preference number: 2 (lower is better)
Translates to: LPWNPQRNLGKLDWNGVPSFLLF*PTAGRV
Trigger: AACCCGTCCAGCTGTGGGGCAGAAAAGCAGAAAGGA...TGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367908.8
3UTR-3UTR GCA 90 bp TATGCCCTCACTCAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCCTTTCCCATCACTCTTaGAAAAGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: YALTQPVTYGRCCWQGLSLSHHS*KSVCVC
Trigger: ACACACACACACACTTTTGCAAGAGTGATGGGAAAG...GCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTGAGTGAGGGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp GGTGCTCATGCATGTAATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCCTCTTGGCTCCTTTCTaGTTTTCTGCCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: GAHACNLYWSNECSVCGRLLAPF*FSAPQL
Trigger: CAGCTGTGGGGCAGAAAAGCAGAAAGGAGCCAAGAG...GCGTCCACATACACTGCATTCGTTGCTCCAGTATAAATTACATGCATGAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367908.8
3UTR-3UTR CCA 90 bp CCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCCAGAGCATAGAGTCTTaGCATTTCATCCCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: PWNPQRNLGKLDWNGVPPQSIES*HFIPLP
Trigger: AGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTG...GGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR TCA 90 bp AAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAGGAAGCACAGTCTGCTaGACTCTTGGCTCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: KKLRKIGLEWGPTLMNTQGSTVC*TLGSFL
Trigger: CAGAAAGGAGCCAAGAGTTCAGCAGACTGTGCTTCC...TTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367908.8
3UTR-3UTR CCA 90 bp TGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATATCCAGAGCATAGAGTCTTaGCATTTCATCCCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: WTGMGSHPDEHSNTKSYIQSIES*HFIPLP
Trigger: AGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTG...GATATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CCA 90 bp TATGCCCTCACTCAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCAGATATTTGCTCCCATaGAACCCTCAAAGAAACTTA +
Preference number: 2 (lower is better)
Translates to: YALTQPVTYGRCCWQGLSRYLLP*NPQRNL
Trigger: TAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCT...GCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTGAGTGAGGGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CCA 90 bp GTGCTCATGCATGTAATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCGGTCTGGAGAACGTGCTaGCCAACAGAATACATGTGC +
Preference number: 2 (lower is better)
Translates to: VLMHVIYTGATNAVYVDAVWRTC*PTEYMC
Trigger: GCACATGTATTCTGTTGGCCAGCACGTTCTCCAGAC...CGCGTCCACATACACTGCATTCGTTGCTCCAGTATAAATTACATGCATGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR CAA 90 bp TCAAAAGTGCCATCAGAGAAAACCAGCTCAAGGGAGCTAAGGTATTaGCTCCTTAGAATAGTGCTCAAGGTGGAGGCTGTCAGTGGTCAA +
Preference number: 2 (lower is better)
Translates to: SKVPSEKTSSRELRY*LLRIVLKVEAVSGQ
Trigger: TTGACCACTGACAGCCTCCACCTTGAGCACTATTCTAAGGAGCAAATACCTTAGCTCCCTTGAGCTGGTTTTCTCTGATGGCACTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp GGAACTCCAGGGATATTAAGGGCAAGATTGCCAGAGAGACAAGAAGGGTACAATGGATGTCATGTGACATaGACTAACCAACCATCCCGA +
Preference number: 2 (lower is better)
Translates to: GTPGILRARLPERQEGYNGCHVT*TNQPSR
Trigger: TCGGGATGGTTGGTTAGTGCATGTCACATGACATCC...ATTGTACCCTTCTTGTCTCTCTGGCAATCTTGCCCTTAATATCCCTGGAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp AGTGGTCAAATCAAGCATGAAGTTCCTTGGATGCTTCTCCAGCAAGATCCATGGAGAGTCTGGAGAACGTaGTGGCCAACAGAATACATG +
Preference number: 2 (lower is better)
Translates to: SGQIKHEVPWMLLQQDPWRVWRT*WPTEYM
Trigger: CATGTATTCTGTTGGCCAGCACGTTCTCCAGACTCT...CCATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCATGCTTGATTTGACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp CAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCTGTATTTCTTCACTTTCCCATCACTCTTaGAAAAGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: QPVTYGRCCWQGLSCISSLSHHS*KSVCVC
Trigger: ACACACACACACACTTTTGCAAGAGTGATGGGAAAG...TGAAGAAATACAGCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp GGAACTCCAGGGATATTAAGGGCAAGATTGCCAGAGAGACAAGAAGGGTACAATGAGCCTAAAAAGAAATaGCTCCAGTCTCTGTTAGCC +
Preference number: 2 (lower is better)
Translates to: GTPGILRARLPERQEGYNEPKKK*LQSLLA
Trigger: GGCTAACAGAGACTGGAGGCATTTCTTTTTAGGCTC...ATTGTACCCTTCTTGTCTCTCTGGCAATCTTGCCCTTAATATCCCTGGAGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CCA 90 bp GTAAGTACATACACATACTCTAGTTATGAGCACCTAGGGTCTTTCCCATCACTCGTCTGGAGAACGTGCTaGCCAACAGAATACATGTGC +
Preference number: 2 (lower is better)
Translates to: VSTYTYSSYEHLGSFPSLVWRTC*PTEYMC
Trigger: GCACATGTATTCTGTTGGCCAGCACGTTCTCCAGAC...GAGTGATGGGAAAGACCCTAGGTGCTCATAACTAGAGTATGTGTATGTACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CCA 90 bp GTGCTCATGCATGTAATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCGAAAAGAAGGGAAGGCTaGCAGCTTAGGAGCTCAAAA +
Preference number: 2 (lower is better)
Translates to: VLMHVIYTGATNAVYVDAKRREG*QLRSSK
Trigger: TTTTGAGCTCCTAAGCTGCCAGCCTTCCCTTCTTTT...CGCGTCCACATACACTGCATTCGTTGCTCCAGTATAAATTACATGCATGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp CCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCGCTATATCTAGTTTATaGGTAGAAGTGACTCACACA +
Preference number: 2 (lower is better)
Translates to: PWNPQRNLGKLDWNGVPPAISSL*VEVTHT
Trigger: TGTGTGAGTCACTTCTACGCATAAACTAGATATAGC...GGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp GGTGCTCATGCATGTAATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCATGAAGTTCCTTGGATaGTTCTCCAGCAAGATCCAT +
Preference number: 2 (lower is better)
Translates to: GAHACNLYWSNECSVCGRMKFLG*FSSKIH
Trigger: ATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCAT...GCGTCCACATACACTGCATTCGTTGCTCCAGTATAAATTACATGCATGAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR CAA 90 bp GGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTaGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCC +
Preference number: 2 (lower is better)
Translates to: GYNVDKALELNTDQY*ASGFPEHRVLAFHP
Trigger: GGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
3UTR-3UTR TCA 90 bp GTAAGTACATACACATACTCTAGTTATGAGCACCTAGGGTCTTTCCCATCACTCACTGCCAACAATCTTTaGAAATCCAGACCTACCAGG +
Preference number: 2 (lower is better)
Translates to: VSTYTYSSYEHLGSFPSLTANNL*KSRPTR
Trigger: CCTGGTAGGTCTGGATTTTCAAAGATTGTTGGCAGT...GAGTGATGGGAAAGACCCTAGGTGCTCATAACTAGAGTATGTGTATGTACTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR CAA 90 bp TACACATACTCTAGTTATGAGCACCTAGGGTCTTTCCCATCACTCTaGCAAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATACA +
Preference number: 2 (lower is better)
Translates to: YTYSSYEHLGSFPSL*QKCVCVCVCVCIHT
Trigger: TGTATGTATACACACACACACACACACACACACACACTTTTGCAAGAGTGATGGGAAAGACCCTAGGTGCTCATAACTAGAGTATGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR TCA 90 bp AAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTGGAATGAAATTAACAAGCATGTGGATGTCATGTaGCATGCACTAACCAACCAT +
Preference number: 2 (lower is better)
Translates to: KEMPPVSVSPDVWNEINKHVDVM*HALTNH
Trigger: ATGGTTGGTTAGTGCATGTCACATGACATCCACATG...CTTGTTAATTTCATTCCAAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp TATGCATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCGGATGTCATGTGACATaGACTAACCAACCATCCCGA +
Preference number: 2 (lower is better)
Translates to: YAYTLVSSFCSPLYWLKSGCHVT*TNQPSR
Trigger: TCGGGATGGTTGGTTAGTGCATGTCACATGACATCC...GCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp GTAAGTACATACACATACTCTAGTTATGAGCACCTAGGGTCTTTCCCATCACTCCCAACAGAATACATGTaGATGTGGATGTCATGTGAC +
Preference number: 2 (lower is better)
Translates to: VSTYTYSSYEHLGSFPSLPTEYM*MWMSCD
Trigger: GTCACATGACATCCACATGCACATGTATTCTGTTGG...GAGTGATGGGAAAGACCCTAGGTGCTCATAACTAGAGTATGTGTATGTACTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp TTCACTGGAAGCATTAGCTTTGAGGCCTATCAAGCACATGATAGAAACAGGCATATGAAGTTCCTTGGATaGTTCTCCAGCAAGATCCAT +
Preference number: 2 (lower is better)
Translates to: FTGSISFEAYQAHDRNRHMKFLG*FSSKIH
Trigger: ATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCAT...ATGCCTGTTTCTATCATGTGCTTGATAGGCCTCAAAGCTAATGCTTCCAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CCA 90 bp AAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACAATACAGATCAATATTTaGCCTCAGGTTTTCCAGAGC +
Preference number: 2 (lower is better)
Translates to: KLRKIGLEWGPTLMNTQTIQINI*PQVFQS
Trigger: GCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT...TGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CCA 90 bp CTGGAAGCATTAGCTTTGAGGCCTATCAAGCACATGATAGAAACAGGCATGCAAATACAGATCAATATTTaGCCTCAGGTTTTCCAGAGC +
Preference number: 2 (lower is better)
Translates to: LEALALRPIKHMIETGMQIQINI*PQVFQS
Trigger: GCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT...TTGCATGCCTGTTTCTATCATGTGCTTGATAGGCCTCAAAGCTAATGCTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CCA 90 bp GAACGTGCTGGCCAACAGAATACATGTGCATGTGGATGTCATGTGACATGCACTATGTGGATAAAGCACTaGAGCTTAATACAGATCAAT +
Preference number: 2 (lower is better)
Translates to: ERAGQQNTCACGCHVTCTMWIKH*SLIQIN
Trigger: ATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT...AGTGCATGTCACATGACATCCACATGCACATGTATTCTGTTGGCCAGCACGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CCA 90 bp AAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTGGAATGAAATTAACAAGAAAAGAAGGGAAGGCTaGCAGCTTAGGAGCTCAAAA +
Preference number: 2 (lower is better)
Translates to: KEMPPVSVSPDVWNEINKKRREG*QLRSSK
Trigger: TTTTGAGCTCCTAAGCTGCCAGCCTTCCCTTCTTTT...CTTGTTAATTTCATTCCAAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp TTAGTCTCAGAGCCTAAAAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTGCTATATCTAGTTTATaGGTAGAAGTGACTCACACA +
Preference number: 2 (lower is better)
Translates to: LVSEPKKKCLQSLLAPMFAISSL*VEVTHT
Trigger: TGTGTGAGTCACTTCTACGCATAAACTAGATATAGC...AAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTTTTAGGCTCTGAGACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp AAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTGGAATGAAATTAACAAGCTTTCCCATCACTCTTaGAAAAGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: KEMPPVSVSPDVWNEINKLSHHS*KSVCVC
Trigger: ACACACACACACACTTTTGCAAGAGTGATGGGAAAG...CTTGTTAATTTCATTCCAAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp CATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCCAGATTAGGAGCTCAAAAGTaGCATCAGAGAAAACCAGCT +
Preference number: 2 (lower is better)
Translates to: HTLWCLHFAAHYIGLKARLGAQK*HQRKPA
Trigger: AGCTGGTTTTCTCTGATGGCACTTTTGAGCTCCTAA...TCTGGCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CCA 90 bp TTTTACAAAACCAACTTTCCACAGGTTAGCATTTCTTTCTTAGCCTACATGGCACAGAGCATAGAGTCTTaGCATTTCATCCCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: FYKTNFPQVSISFLAYMAQSIES*HFIPLP
Trigger: AGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTG...TGCCATGTAGGCTAAGAAAGAAATGCTAACCTGTGGAAAGTTGGTTTTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CCA 90 bp CCAGACCTACCAGGCCATTATTTAGATATTTGCTCCCATGGAACCCTCAAAGAAAGATATTTGCTCCCATaGAACCCTCAAAGAAACTTA +
Preference number: 2 (lower is better)
Translates to: PDLPGHYLDICSHGTLKERYLLP*NPQRNL
Trigger: TAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCT...TTCTTTGAGGGTTCCATGGGAGCAAATATCTAAATAATGGCCTGGTAGGTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CCA 90 bp TATTTGCTCCTTAGAATAGTGCTCAAGGTGGAGGCTGTCAGTGGTCAAATCAAGCTCCAGCAAGATCCATaGAATTTTACAAAACCAACT +
Preference number: 2 (lower is better)
Translates to: YLLLRIVLKVEAVSGQIKLQQDP*NFTKPT
Trigger: AGTTGGTTTTGTAAAATTCCATGGATCTTGCTGGAG...CTTGATTTGACCACTGACAGCCTCCACCTTGAGCACTATTCTAAGGAGCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CCA 90 bp GGAACTCCAGGGATATTAAGGGCAAGATTGCCAGAGAGACAAGAAGGGTACAATGTTAGCCCCGATGTTTaGAATGAAATTAACAAGATT +
Preference number: 2 (lower is better)
Translates to: GTPGILRARLPERQEGYNVSPDV*NEINKI
Trigger: AATCTTGTTAATTTCATTCCAAACATCGGGGCTAAC...ATTGTACCCTTCTTGTCTCTCTGGCAATCTTGCCCTTAATATCCCTGGAGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp TGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCCAGAAAGGTGCTCGCTATATCTAGTTTATaGGTAGAAGTGACTCACACA +
Preference number: 2 (lower is better)
Translates to: WCLHFAAHYIGLKARKVLAISSL*VEVTHT
Trigger: TGTGTGAGTCACTTCTACGCATAAACTAGATATAGC...GAGCACCTTTCTGGCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp TTAGTCTCAGAGCCTAAAAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTCATTATTTAGATATTTaGTCCCATGGAACCCTCAAA +
Preference number: 2 (lower is better)
Translates to: LVSEPKKKCLQSLLAPMFHYLDI*SHGTLK
Trigger: TTTGAGGGTTCCATGGGAGCAAATATCTAAATAATG...AAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTTTTAGGCTCTGAGACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp ACCTGCATCTTTAATACAGTGAGATTTGTATGCATACACTCTGGTGTCTTCATTGAGCCTAAAAAGAAATaGCTCCAGTCTCTGTTAGCC +
Preference number: 2 (lower is better)
Translates to: TCIFNTVRFVCIHSGVFIEPKKK*LQSLLA
Trigger: GGCTAACAGAGACTGGAGGCATTTCTTTTTAGGCTC...AATGAAGACACCAGAGTGTATGCATACAAATCTCACTGTATTAAAGATGCAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp TTTTACAAAACCAACTTTCCACAGGTTAGCATTTCTTTCTTAGCCTACATGGCACCAACAGAATACATGTaGATGTGGATGTCATGTGAC +
Preference number: 2 (lower is better)
Translates to: FYKTNFPQVSISFLAYMAPTEYM*MWMSCD
Trigger: GTCACATGACATCCACATGCACATGTATTCTGTTGG...TGCCATGTAGGCTAAGAAAGAAATGCTAACCTGTGGAAAGTTGGTTTTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR GCA 90 bp TTTTACAAAACCAACTTTCCACAGGTTAGCATTTCTTTCTTAGCCTACATGGCATTGGGAGGAGGAAACTaGCAACAATCTTTGAAAATC +
Preference number: 2 (lower is better)
Translates to: FYKTNFPQVSISFLAYMALGGGN*QQSLKI
Trigger: GATTTTCAAAGATTGTTGGCAGTTTCCTCCTCCCAA...TGCCATGTAGGCTAAGAAAGAAATGCTAACCTGTGGAAAGTTGGTTTTGTAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CAA 90 bp TTTCTGCTTTTCTGCCCCACAGCTGGACGGGTTGACCAAATCAAGATAGAATCGCCAGAGCATAGAGTCTaGGCATTTCATCCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: FLLFCPTAGRVDQIKIESPEHRV*AFHPSA
Trigger: GGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGG...CGATTCTATCTTGATTTGGTCAACCCGTCCAGCTGTGGGGCAGAAAAGCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367908.8
3UTR-3UTR CAA 90 bp TATGCCCTCACTCAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCAACTGCCAACAATCTTaGAAAATCCAGACCTACCAG +
Preference number: 3 (lower is better)
Translates to: YALTQPVTYGRCCWQGLSNCQQS*KIQTYQ
Trigger: CTGGTAGGTCTGGATTTTCAAAGATTGTTGGCAGTT...GCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTGAGTGAGGGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR TCA 72 bp GCTCAAGGTGGAGGCTGTCAGTGGTCAAATCAAGCATaGAGTTCCTTGGATGCTTCTCCAGCAAGATCCATG +
Preference number: 3 (lower is better)
Translates to: AQGGGCQWSNQA*SSLDASPARSM
Trigger: CATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCATGCTTGATTTGACCACTGACAGCCTCCACCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGACCAGAGCATAGAGTCTaGGCATTTCATCCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGPEHRV*AFHPSA
Trigger: GGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGG...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
3UTR GCA 72 bp AACCATCCCGAGGTAAAACTGTTGGGAGGAGGAAACTaGCAACAATCTTTGAAAATCCAGACCTACCAGGCC +
Preference number: 3 (lower is better)
Translates to: NHPEVKLLGGGN*QQSLKIQTYQA
Trigger: GGCCTGGTAGGTCTGGATTTTCAAAGATTGTTGGCAGTTTCCTCCTCCCAACAGTTTTACCTCGGGATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR TCA 72 bp CTGGCCAACAGAATACATGTGCATGTGGATGTCATGTaGCATGCACTAACCAACCATCCCGAGGTAAAACTG +
Preference number: 3 (lower is better)
Translates to: LANRIHVHVDVM*HALTNHPEVKL
Trigger: CAGTTTTACCTCGGGATGGTTGGTTAGTGCATGTCACATGACATCCACATGCACATGTATTCTGTTGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR TCA 72 bp GCATGCAAAAGGAAGGAGTATTCTGTCCAGGGAGCATaGGCAGGCAAGCTCACCATTGGAAATAGTGATGAA +
Preference number: 3 (lower is better)
Translates to: ACKRKEYSVQGA*AGKLTIGNSDE
Trigger: TTCATCACTATTTCCAATGGTGAGCTTGCCTGCTCATGCTCCCTGGACAGAATACTCCTTCCTTTTGCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
3UTR GCA 72 bp TATGCCCTCACTCAGCCAGTAACTTACGGCAGGTGTTaGTGGCAAGGCCTTAGCTGTATTTCTTCATTAAGT +
Preference number: 3 (lower is better)
Translates to: YALTQPVTYGRC*WQGLSCISSLS
Trigger: ACTTAATGAAGAAATACAGCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTGAGTGAGGGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CAA 90 bp TGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTCCAGAGCATAGAGTCTaGGCATTTCATCCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: WSLIQINIWPQVFQSIESPEHRV*AFHPSA
Trigger: GGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGG...AGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
3UTR-3UTR CAA 90 bp GCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGCCAGAGCATAGAGTCTaGGCATTTCATCCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: ATMWIKHWSLIQINIWPQPEHRV*AFHPSA
Trigger: GGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGG...CTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
3UTR GCA 72 bp CAACAGAATACATGTGCATGTGGATGTCATGTGACATaGACTAACCAACCATCCCGAGGTAAAACTGTTGGG +
Preference number: 3 (lower is better)
Translates to: QQNTCACGCHVT*TNQPSRGKTVG
Trigger: CCCAACAGTTTTACCTCGGGATGGTTGGTTAGTGCATGTCACATGACATCCACATGCACATGTATTCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR CCA 72 bp GAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATaGGGTCCCACCCTGATGAACACTCAAACACCAAAA +
Preference number: 3 (lower is better)
Translates to: EPSKKLRKIGLE*GPTLMNTQTPK
Trigger: TTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR CCA 72 bp GAGGCTGTCAGTGGTCAAATCAAGCATGAAGTTCCTTaGATGCTTCTCCAGCAAGATCCATGGAATTTTACA +
Preference number: 3 (lower is better)
Translates to: EAVSGQIKHEVP*MLLQQDPWNFT
Trigger: TGTAAAATTCCATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCATGCTTGATTTGACCACTGACAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CAA 90 bp TGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGTCCTTCTCCATCAGGTaGAAAATCTTCTTCTGGGCC +
Preference number: 3 (lower is better)
Translates to: WIKHWSLIQINIWPQVFQSFSIR*KIFFWA
Trigger: GGCCCAGAAGAAGATTTTCAACCTGATGGAGAAGGA...CTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367908.8
3UTR-3UTR CAA 90 bp GGTGCTCATGCATGTAATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCCCATTATTTAGATATTaGCTCCCATGGAACCCTCAA +
Preference number: 3 (lower is better)
Translates to: GAHACNLYWSNECSVCGRPLFRY*LPWNPQ
Trigger: TTGAGGGTTCCATGGGAGCAAATATCTAAATAATGG...GCGTCCACATACACTGCATTCGTTGCTCCAGTATAAATTACATGCATGAGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CAA 90 bp CATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCCAGATCTTTCCCATCACTCTaGCAAAAGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: HTLWCLHFAAHYIGLKARSFPSL*QKCVCV
Trigger: CACACACACACACTTTTGCAAGAGTGATGGGAAAGA...TCTGGCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CAA 90 bp ACACTGATGAGGAACTCCAGGGATATTAAGGGCAAGATTGCCAGAGAGACAAGATATTTCTTCATTAAGTaGAACATCCTGTCTGCCAAC +
Preference number: 3 (lower is better)
Translates to: TLMRNSRDIKGKIARETRYFFIK*NILSAN
Trigger: GTTGGCAGACAGGATGTTCAACTTAATGAAGAAATA...TCTTGTCTCTCTGGCAATCTTGCCCTTAATATCCCTGGAGTTCCTCATCAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR GCA 72 bp CTGTCAGTGGTCAAATCAAGCATGAAGTTCCTTGGATaGTTCTCCAGCAAGATCCATGGAATTTTACAAAAC +
Preference number: 3 (lower is better)
Translates to: LSVVKSSMKFLG*FSSKIHGILQN
Trigger: GTTTTGTAAAATTCCATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCATGCTTGATTTGACCACTGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR CCA 72 bp TGGATAAAGCACTGGAGCTTAATACAGATCAATATTTaGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCAT +
Preference number: 3 (lower is better)
Translates to: WIKHWSLIQINI*PQVFQSIESWH
Trigger: ATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
3UTR CCA 72 bp AGACCTACCAGGCCATTATTTAGATATTTGCTCCCATaGAACCCTCAAAGAAACTTAGGAAAATTGGACTGG +
Preference number: 3 (lower is better)
Translates to: RPTRPLFRYLLP*NPQRNLGKLDW
Trigger: CCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCTAAATAATGGCCTGGTAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR CCA 72 bp CATGAAGTTCCTTGGATGCTTCTCCAGCAAGATCCATaGAATTTTACAAAACCAACTTTCCACAGGTTAGCA +
Preference number: 3 (lower is better)
Translates to: HEVPWMLLQQDP*NFTKPTFHRLA
Trigger: TGCTAACCTGTGGAAAGTTGGTTTTGTAAAATTCCATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CAA 90 bp GTAAGTACATACACATACTCTAGTTATGAGCACCTAGGGTCTTTCCCATCACTCAATACAGATCAATATTaGGCCTCAGGTTTTCCAGAG +
Preference number: 3 (lower is better)
Translates to: VSTYTYSSYEHLGSFPSLNTDQY*ASGFPE
Trigger: CTCTGGAAAACCTGAGGCCAAATATTGATCTGTATT...GAGTGATGGGAAAGACCCTAGGTGCTCATAACTAGAGTATGTGTATGTACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR-3UTR CAA 90 bp TTCACTGGAAGCATTAGCTTTGAGGCCTATCAAGCACATGATAGAAACAGGCATCCATTATTTAGATATTaGCTCCCATGGAACCCTCAA +
Preference number: 3 (lower is better)
Translates to: FTGSISFEAYQAHDRNRHPLFRY*LPWNPQ
Trigger: TTGAGGGTTCCATGGGAGCAAATATCTAAATAATGG...ATGCCTGTTTCTATCATGTGCTTGATAGGCCTCAAAGCTAATGCTTCCAGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
3UTR TCA 72 bp AAGGGTACAATTAGAAAACCTGCATCTTTAATACAGTaGGATTTGTATGCATACACTCTGGTGTCTTCATTT +
Preference number: 3 (lower is better)
Translates to: KGTIRKPASLIQ*DLYAYTLVSSF
Trigger: AAATGAAGACACCAGAGTGTATGCATACAAATCTCACTGTATTAAAGATGCAGGTTTTCTAATTGTACCCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp GTCTGCCAACTCCATACCAACCCAGCTGCTAATAAGCATGCCCTGAGCACCCAGATCGTCTCCACGCAGTaGTTTGCGGAAGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VCQLHTNPAANKHALSTQIVSTQ*FAEVAL
Trigger: CAAGGCAACTTCCGCAAATCACTGCGTGGAGACGAT...CTGGGTGCTCAGGGCATGCTTATTAGCAGCTGGGTTGGTATGGAGTTGGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR GCA 90 bp GTCTGCCAACTCCATACCAACCCAGCTGCTAATAAGCATGCCCTGAGCACCCAGCTCTTGGCTCCTTTCTaGTTTTCTGCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: VCQLHTNPAANKHALSTQLLAPF*FSAPQL
Trigger: CAGCTGTGGGGCAGAAAAGCAGAAAGGAGCCAAGAG...CTGGGTGCTCAGGGCATGCTTATTAGCAGCTGGGTTGGTATGGAGTTGGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp CTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTCTGCCTTCAGGTaGGAATTAGGCACACTGAGG +
Preference number: 4 (lower is better)
Translates to: LPWNPQRNLGKLDWNGVPPSAFR*ELGTLR
Trigger: CCTCAGTGTGCCTAATTCTCACCTGAAGGCAGAGGG...TGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCTGTATTTCTTCAAGAAGCCGGCAGACCTaGAAGCCCTTTGCACATCTT +
Preference number: 4 (lower is better)
Translates to: QPVTYGRCCWQGLSCISSRSRQT*KPFAHL
Trigger: AAGATGTGCAAAGGGCTTGCAGGTCTGCCGGCTTCT...TGAAGAAATACAGCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp GTCTGCCAACTCCATACCAACCCAGCTGCTAATAAGCATGCCCTGAGCACCCAGGTGATTTGCGGAAGTTaGCTTGGTTGTTATGCAAAC +
Preference number: 4 (lower is better)
Translates to: VCQLHTNPAANKHALSTQVICGS*LGCYAN
Trigger: GTTTGCATAACAACCAAGGCAACTTCCGCAAATCAC...CTGGGTGCTCAGGGCATGCTTATTAGCAGCTGGGTTGGTATGGAGTTGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR CCA 90 bp CAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCTGTATTTCTTCAGTCTGGAGAACGTGCTaGCCAACAGAATACATGTGC +
Preference number: 4 (lower is better)
Translates to: QPVTYGRCCWQGLSCISSVWRTC*PTEYMC
Trigger: GCACATGTATTCTGTTGGCCAGCACGTTCTCCAGAC...TGAAGAAATACAGCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGACTGTGGCTTCGGCTTTaGGCGTACTTTGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGLWLRL*AYFASS
Trigger: AGAAGAGGCAAAGTACGCTCAAAGCCGAAGCCACAG...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000531057.5
CDS-3UTR TCA 90 bp CTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCAGATAGAATCGAGACTTaGGGAAGCGGCGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: LPWNPQRNLGKLDWNGVPDRIET*GSGGRN
Trigger: ATTCCTACCGCCGCTTCCTCAAGTCTCGATTCTATC...TGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp TGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATATCGATAGAATCGAGACTTaGGGAAGCGGCGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: WTGMGSHPDEHSNTKSYIDRIET*GSGGRN
Trigger: ATTCCTACCGCCGCTTCCTCAAGTCTCGATTCTATC...GATATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp GAACGTGCTGGCCAACAGAATACATGTGCATGTGGATGTCATGTGACATGCACTGATAGAATCGAGACTTaGGGAAGCGGCGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: ERAGQQNTCACGCHVTCTDRIET*GSGGRN
Trigger: ATTCCTACCGCCGCTTCCTCAAGTCTCGATTCTATC...AGTGCATGTCACATGACATCCACATGCACATGTATTCTGTTGGCCAGCACGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp CCAGACCTACCAGGCCATTATTTAGATATTTGCTCCCATGGAACCCTCAAAGAATCTGTCCAGGGAGCATaGGCAGGCAAGCTCACCATT +
Preference number: 4 (lower is better)
Translates to: PDLPGHYLDICSHGTLKESVQGA*AGKLTI
Trigger: AATGGTGAGCTTGCCTGCTCATGCTCCCTGGACAGA...TTCTTTGAGGGTTCCATGGGAGCAAATATCTAAATAATGGCCTGGTAGGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAAGAAGCCGGCAGACCTaGAAGCCCTTTGCACATCTT +
Preference number: 4 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGRSRQT*KPFAHL
Trigger: AAGATGTGCAAAGGGCTTGCAGGTCTGCCGGCTTCT...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000531057.5
CDS-3UTR GCA 90 bp CCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCGGCATTTCATCCCTCTaGCTTCAGGTGAGAATTAGG +
Preference number: 4 (lower is better)
Translates to: PWNPQRNLGKLDWNGVPPGISSL*LQVRIR
Trigger: CCTAATTCTCACCTGAAGGCAGAGGGATGAAATGCC...GGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAGTGGACGCGTGTGTGTaGACTTTGAAAGGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: LRKIGLEWGPTLMNTQTPVDACV*TLKGSS
Trigger: ACTACTGCCTTTCAAAGTGCACACACACGCGTCCAC...TGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AGCTCAAGGGAGCTAAGGTATTTGCTCCTTAGAATAGTGCTCAAGGTGGAGGCTTACTGGAGCAACGAATaGAGTGTATGTGGACGCGTG +
Preference number: 4 (lower is better)
Translates to: SSRELRYLLLRIVLKVEAYWSNE*SVCGRV
Trigger: CACGCGTCCACATACACTGCATTCGTTGCTCCAGTA...AGCCTCCACCTTGAGCACTATTCTAAGGAGCAAATACCTTAGCTCCCTTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp CTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAGGCTTGTCTCTTCCCTaGTGCAAGAATCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LRKIGLEWGPTLMNTQTPGLSLP*CKNPGS
Trigger: TGAACCTGGATTCTTGCACCAGGGAAGAGACAAGCC...TGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp TATGCCCTCACTCAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCATACAGATCAATATTTaGCCTCAGGTTTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: YALTQPVTYGRCCWQGLSIQINI*PQVFQS
Trigger: GCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT...GCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTGAGTGAGGGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
3UTR CAA 72 bp CCATCAGAGAAAACCAGCTCAAGGGAGCTAAGGTATTaGCTCCTTAGAATAGTGCTCAAGGTGGAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PSEKTSSRELRY*LLRIVLKVEAV
Trigger: GACAGCCTCCACCTTGAGCACTATTCTAAGGAGCAAATACCTTAGCTCCCTTGAGCTGGTTTTCTCTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp AAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAACTGTGGCTTCGGCTTTaGGCGTACTTTGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KKLRKIGLEWGPTLMNTQLWLRL*AYFASS
Trigger: AGAAGAGGCAAAGTACGCTCAAAGCCGAAGCCACAG...TTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp CTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCACCTTCTCCATCAGGTTaGAAATCTTCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LRKIGLEWGPTLMNTQTPPSPSG*KSSSGP
Trigger: AGGCCCAGAAGAAGATTTTCAACCTGATGGAGAAGG...TGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAGATAGAATCGAGACTTaGGGAAGCGGCGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGDRIET*GSGGRN
Trigger: ATTCCTACCGCCGCTTCCTCAAGTCTCGATTCTATC...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp TTCACTGGAAGCATTAGCTTTGAGGCCTATCAAGCACATGATAGAAACAGGCATCCCTCTGCCTTCAGGTaGGAATTAGGCACACTGAGG +
Preference number: 4 (lower is better)
Translates to: FTGSISFEAYQAHDRNRHPSAFR*ELGTLR
Trigger: CCTCAGTGTGCCTAATTCTCACCTGAAGGCAGAGGG...ATGCCTGTTTCTATCATGTGCTTGATAGGCCTCAAAGCTAATGCTTCCAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp GCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGCCAGCCCTTAGGAGCTaGCTCCCAATGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ATMWIKHWSLIQINIWPQPALRS*LPMPFL
Trigger: GAGGAAAGGCATTGGGAGTCAGCTCCTAAGGGCTGG...CTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR GCA 90 bp AAAACAGTAACCTTTAACTTCTATGCCCTCACTCAGCCAGTAACTTACGGCAGGAGAAGCCGGCAGACCTaGAAGCCCTTTGCACATCTT +
Preference number: 4 (lower is better)
Translates to: KTVTFNFYALTQPVTYGRRSRQT*KPFAHL
Trigger: AAGATGTGCAAAGGGCTTGCAGGTCTGCCGGCTTCT...CCTGCCGTAAGTTACTGGCTGAGTGAGGGCATAGAAGTTAAAGGTTACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCGAAAGCTTTGAAAGCTaGCAGCCCACATTCATGACT +
Preference number: 4 (lower is better)
Translates to: PWNPQRNLGKLDWNGVPPESFES*QPTFMT
Trigger: AGTCATGAATGTGGGCTGGCAGCTTTCAAAGCTTTC...GGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAATCCTTTCTGCTTTTCTaGCCCACAGCTGGACGGGTT +
Preference number: 4 (lower is better)
Translates to: KKLRKIGLEWGPTLMNTQSFLLF*PTAGRV
Trigger: AACCCGTCCAGCTGTGGGGCAGAAAAGCAGAAAGGA...TTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CTGGAAGCATTAGCTTTGAGGCCTATCAAGCACATGATAGAAACAGGCATGCAATCCTTTCTGCTTTTCTaGCCCACAGCTGGACGGGTT +
Preference number: 4 (lower is better)
Translates to: LEALALRPIKHMIETGMQSFLLF*PTAGRV
Trigger: AACCCGTCCAGCTGTGGGGCAGAAAAGCAGAAAGGA...TTGCATGCCTGTTTCTATCATGTGCTTGATAGGCCTCAAAGCTAATGCTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACATCCTTTCTGCTTTTCTaGCCCACAGCTGGACGGGTT +
Preference number: 4 (lower is better)
Translates to: KLRKIGLEWGPTLMNTQTSFLLF*PTAGRV
Trigger: AACCCGTCCAGCTGTGGGGCAGAAAAGCAGAAAGGA...TGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAACTCTTGGCTCCTTTCTaGTTTTCTGCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: KKLRKIGLEWGPTLMNTQLLAPF*FSAPQL
Trigger: CAGCTGTGGGGCAGAAAAGCAGAAAGGAGCCAAGAG...TTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCAGGCATTTCATCCCTCTaGCTTCAGGTGAGAATTAGG +
Preference number: 4 (lower is better)
Translates to: LPWNPQRNLGKLDWNGVPGISSL*LQVRIR
Trigger: CCTAATTCTCACCTGAAGGCAGAGGGATGAAATGCC...TGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ACACTGATGAGGAACTCCAGGGATATTAAGGGCAAGATTGCCAGAGAGACAAGAGTGGACGCGTGTGTGTaGACTTTGAAAGGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: TLMRNSRDIKGKIARETRVDACV*TLKGSS
Trigger: ACTACTGCCTTTCAAAGTGCACACACACGCGTCCAC...TCTTGTCTCTCTGGCAATCTTGCCCTTAATATCCCTGGAGTTCCTCATCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AGTGGTCAAATCAAGCATGAAGTTCCTTGGATGCTTCTCCAGCAAGATCCATGGCTCCACGCAGTGATTTaGGGAAGTTGCCTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SGQIKHEVPWMLLQQDPWLHAVI*GSCLGC
Trigger: ACAACCAAGGCAACTTCCGCAAATCACTGCGTGGAG...CCATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCATGCTTGATTTGACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR GCA 90 bp TGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCTGCCTTCAGGAGCTGACTCCCAATaGCTTTCCTCTTTTGGATTA +
Preference number: 4 (lower is better)
Translates to: WPQVFQSIESWHFIPLPSGADSQ*LSSFGL
Trigger: TAATCCAAAAGAGGAAAGGCATTGGGAGTCAGCTCC...TGAAGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR CCA 90 bp AGTGGTCAAATCAAGCATGAAGTTCCTTGGATGCTTCTCCAGCAAGATCCATGGGGCTTGTCTCTTCCCTaGTGCAAGAATCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SGQIKHEVPWMLLQQDPWGLSLP*CKNPGS
Trigger: TGAACCTGGATTCTTGCACCAGGGAAGAGACAAGCC...CCATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCATGCTTGATTTGACCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp GTCTGCCAACTCCATACCAACCCAGCTGCTAATAAGCATGCCCTGAGCACCCAGCTCCAGCAAGATCCATaGAATTTTACAAAACCAACT +
Preference number: 4 (lower is better)
Translates to: VCQLHTNPAANKHALSTQLQQDP*NFTKPT
Trigger: AGTTGGTTTTGTAAAATTCCATGGATCTTGCTGGAG...CTGGGTGCTCAGGGCATGCTTATTAGCAGCTGGGTTGGTATGGAGTTGGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp GTCTGCCAACTCCATACCAACCCAGCTGCTAATAAGCATGCCCTGAGCACCCAGTCTTTCCCCTGCTGCTaGTTTATAAATATAGGCATA +
Preference number: 4 (lower is better)
Translates to: VCQLHTNPAANKHALSTQSFPCC*FINIGI
Trigger: TATGCCTATATTTATAAACCAGCAGCAGGGGAAAGA...CTGGGTGCTCAGGGCATGCTTATTAGCAGCTGGGTTGGTATGGAGTTGGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp TGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCTGCCTTCAAATCAGGTTTTCCAGTaGTTCAGCCCATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: WPQVFQSIESWHFIPLPSNQVFQ*FSPFLD
Trigger: GTCAAGAAATGGGCTGAATCACTGGAAAACCTGATT...TGAAGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGACCTTCTCCATCAGGTTaGAAATCTTCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGPSPSG*KSSSGP
Trigger: AGGCCCAGAAGAAGATTTTCAACCTGATGGAGAAGG...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp GTGCTCATGCATGTAATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCGCACAGCTGGACGGGTTaGCCAAATCAAGATAGAATC +
Preference number: 4 (lower is better)
Translates to: VLMHVIYTGATNAVYVDAHSWTG*PNQDRI
Trigger: GATTCTATCTTGATTTGGTCAACCCGTCCAGCTGTG...CGCGTCCACATACACTGCATTCGTTGCTCCAGTATAAATTACATGCATGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp CAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCGGAAGCACAGTCTGCTaGACTCTTGGCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QINIWPQVFQSIESWHFIGSTVC*TLGSFL
Trigger: CAGAAAGGAGCCAAGAGTTCAGCAGACTGTGCTTCC...GATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp GTAAGTACATACACATACTCTAGTTATGAGCACCTAGGGTCTTTCCCATCACTCGGAAGCACAGTCTGCTaGACTCTTGGCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VSTYTYSSYEHLGSFPSLGSTVC*TLGSFL
Trigger: CAGAAAGGAGCCAAGAGTTCAGCAGACTGTGCTTCC...GAGTGATGGGAAAGACCCTAGGTGCTCATAACTAGAGTATGTGTATGTACTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp AAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTGGAATGAAATTAACAAGCCCTCTGCCTTCAGGTaGGAATTAGGCACACTGAGG +
Preference number: 4 (lower is better)
Translates to: KEMPPVSVSPDVWNEINKPSAFR*ELGTLR
Trigger: CCTCAGTGTGCCTAATTCTCACCTGAAGGCAGAGGG...CTTGTTAATTTCATTCCAAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp TGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGCCCTCTGCCTTCAGGTaGGAATTAGGCACACTGAGG +
Preference number: 4 (lower is better)
Translates to: WIKHWSLIQINIWPQVFQPSAFR*ELGTLR
Trigger: CCTCAGTGTGCCTAATTCTCACCTGAAGGCAGAGGG...CTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp GGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCACCCTCTGCCTTCAGGTaGGAATTAGGCACACTGAGG +
Preference number: 4 (lower is better)
Translates to: GYNVDKALELNTDQYLASPSAFR*ELGTLR
Trigger: CCTCAGTGTGCCTAATTCTCACCTGAAGGCAGAGGG...TGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp ACTAACCAACCATCCCGAGGTAAAACTGTTGGGAGGAGGAAACTGCCAACAATCCATGTGGATGTCATGTaGCATGCACTAACCAACCAT +
Preference number: 4 (lower is better)
Translates to: TNQPSRGKTVGRRKLPTIHVDVM*HALTNH
Trigger: ATGGTTGGTTAGTGCATGTCACATGACATCCACATG...GATTGTTGGCAGTTTCCTCCTCCCAACAGTTTTACCTCGGGATGGTTGGTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp TTAGTCTCAGAGCCTAAAAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTCTAAGGAGCCTCATCTaGTGGCTAAGGTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LVSEPKKKCLQSLLAPMFLRSLI*WLRFSG
Trigger: TCCTGAGAACCTTAGCCATCAGATGAGGCTCCTTAG...AAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTTTTAGGCTCTGAGACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCTCTGTCCAGGGAGCATaGGCAGGCAAGCTCACCATT +
Preference number: 4 (lower is better)
Translates to: IQINIWPQVFQSIESWHFSVQGA*AGKLTI
Trigger: AATGGTGAGCTTGCCTGCTCATGCTCCCTGGACAGA...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp GTTGACCAAATCAAGATAGAATCGAGACTTGAGGAAGCGGCGGTAGGAATCCTTGGATGTCATGTGACATaGACTAACCAACCATCCCGA +
Preference number: 4 (lower is better)
Translates to: VDQIKIESRLEEAAVGILGCHVT*TNQPSR
Trigger: TCGGGATGGTTGGTTAGTGCATGTCACATGACATCC...AAGGATTCCTACCGCCGCTTCCTCAAGTCTCGATTCTATCTTGATTTGGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367908.8
CDS-3UTR GCA 90 bp GGTGCTCATGCATGTAATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCAGAGTCTGGAGAACGTaGTGGCCAACAGAATACATG +
Preference number: 4 (lower is better)
Translates to: GAHACNLYWSNECSVCGRRVWRT*WPTEYM
Trigger: CATGTATTCTGTTGGCCAGCACGTTCTCCAGACTCT...GCGTCCACATACACTGCATTCGTTGCTCCAGTATAAATTACATGCATGAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTTTCCCATCACTCTTaGAAAAGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PMEPSKKLRKIGLEWGPTLSHHS*KSVCVC
Trigger: ACACACACACACACTTTTGCAAGAGTGATGGGAAAG...GGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp TGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCCAGAAAGGTGCTCACTTACGGCAGGTGTTaGTGGCAAGGCCTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: WCLHFAAHYIGLKARKVLTYGRC*WQGLSC
Trigger: ACAGCTAAGGCCTTGCCAGCAACACCTGCCGTAAGT...GAGCACCTTTCTGGCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AGCTCAAGGGAGCTAAGGTATTTGCTCCTTAGAATAGTGCTCAAGGTGGAGGCTTTGTCTCTTCCCTGGTaGAAGAATCCAGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: SSRELRYLLLRIVLKVEALSLPW*KNPGSH
Trigger: ATGTGAACCTGGATTCTTGCACCAGGGAAGAGACAA...AGCCTCCACCTTGAGCACTATTCTAAGGAGCAAATACCTTAGCTCCCTTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367908.8
CDS-3UTR GCA 90 bp CAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCTGTATTTCTTCATTGCCTTGGTTGTTATaGAAACAAGAAGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QPVTYGRCCWQGLSCISSLPWLL*KQEGGE
Trigger: CTCTCCACCTTCTTGTTTGCATAACAACCAAGGCAA...TGAAGAAATACAGCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR CCA 90 bp CCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCTTCTTGACTTCCTCTTaGCTCACTCTCTGGCAAATA +
Preference number: 4 (lower is better)
Translates to: PMEPSKKLRKIGLEWGPTFLTSS*LTLWQI
Trigger: TATTTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAA...GGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp AATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCTGGGCTTGTCTCTTCCCTaGTGCAAGAATCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: NIWPQVFQSIESWHFIPLGLSLP*CKNPGS
Trigger: TGAACCTGGATTCTTGCACCAGGGAAGAGACAAGCC...CAGAGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CCA 90 bp AAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAGTCTGGAGAACGTGCTaGCCAACAGAATACATGTGC +
Preference number: 4 (lower is better)
Translates to: KKLRKIGLEWGPTLMNTQVWRTC*PTEYMC
Trigger: GCACATGTATTCTGTTGGCCAGCACGTTCTCCAGAC...TTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp AAAACAGTAACCTTTAACTTCTATGCCCTCACTCAGCCAGTAACTTACGGCAGGTACGGCAGGTGTTGCTaGCAAGGCCTTAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: KTVTFNFYALTQPVTYGRYGRCC*QGLSCI
Trigger: AATACAGCTAAGGCCTTGCCAGCAACACCTGCCGTA...CCTGCCGTAAGTTACTGGCTGAGTGAGGGCATAGAAGTTAAAGGTTACTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCCTGTGGCTTCGGCTTTaGGCGTACTTTGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IQINIWPQVFQSIESWHFLWLRL*AYFASS
Trigger: AGAAGAGGCAAAGTACGCTCAAAGCCGAAGCCACAG...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp AAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAATTCAGCCCATTTCTTaGCTTCCTCTTGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: KKLRKIGLEWGPTLMNTQIQPIS*LPLGSL
Trigger: GAGTGAGCCAAGAGGAAGTCAAGAAATGGGCTGAAT...TTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp ACTAACCAACCATCCCGAGGTAAAACTGTTGGGAGGAGGAAACTGCCAACAATCAATCAGGTTTTCCAGTaGTTCAGCCCATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: TNQPSRGKTVGRRKLPTINQVFQ*FSPFLD
Trigger: GTCAAGAAATGGGCTGAATCACTGGAAAACCTGATT...GATTGTTGGCAGTTTCCTCCTCCCAACAGTTTTACCTCGGGATGGTTGGTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp GAACGTGCTGGCCAACAGAATACATGTGCATGTGGATGTCATGTGACATGCACTAATCAGGTTTTCCAGTaGTTCAGCCCATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: ERAGQQNTCACGCHVTCTNQVFQ*FSPFLD
Trigger: GTCAAGAAATGGGCTGAATCACTGGAAAACCTGATT...AGTGCATGTCACATGACATCCACATGCACATGTATTCTGTTGGCCAGCACGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp TGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGGGAAGCACAGTCTGCTaGACTCTTGGCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: WIKHWSLIQINIWPQVFQGSTVC*TLGSFL
Trigger: CAGAAAGGAGCCAAGAGTTCAGCAGACTGTGCTTCC...CTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp ACACTGATGAGGAACTCCAGGGATATTAAGGGCAAGATTGCCAGAGAGACAAGAACTGCCAACAATCTTTaGAAATCCAGACCTACCAGG +
Preference number: 4 (lower is better)
Translates to: TLMRNSRDIKGKIARETRTANNL*KSRPTR
Trigger: CCTGGTAGGTCTGGATTTTCAAAGATTGTTGGCAGT...TCTTGTCTCTCTGGCAATCTTGCCCTTAATATCCCTGGAGTTCCTCATCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp TGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATATCTGGTCAAATCAAGCATaGAGTTCCTTGGATGCTTCT +
Preference number: 4 (lower is better)
Translates to: WTGMGSHPDEHSNTKSYIWSNQA*SSLDAS
Trigger: AGAAGCATCCAAGGAACTTCATGCTTGATTTGACCA...GATATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp TTCACTGGAAGCATTAGCTTTGAGGCCTATCAAGCACATGATAGAAACAGGCATCTAAGGAGCCTCATCTaGTGGCTAAGGTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: FTGSISFEAYQAHDRNRHLRSLI*WLRFSG
Trigger: TCCTGAGAACCTTAGCCATCAGATGAGGCTCCTTAG...ATGCCTGTTTCTATCATGTGCTTGATAGGCCTCAAAGCTAATGCTTCCAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAGCTTTGAGCGTACTTTaGCTCTTCTCCGGTAAAGAT +
Preference number: 4 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGALSVL*LFSGKD
Trigger: ATCTTTACCGGAGAAGAGGCAAAGTACGCTCAAAGC...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000531057.5
CDS-3UTR GCA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGACAGGAATCAGATTTTTaGAGCAGGAAACCTAGCCGA +
Preference number: 4 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGQESDF*SRKPSR
Trigger: TCGGCTAGGTTTCCTGCTGCAAAAATCTGATTCCTG...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR GCA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAGAAAGCTTTGAAAGCTaGCAGCCCACATTCATGACT +
Preference number: 4 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGESFES*QPTFMT
Trigger: AGTCATGAATGTGGGCTGGCAGCTTTCAAAGCTTTC...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR GCA 90 bp GGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCACTCTTGGCTCCTTTCTaGTTTTCTGCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: GYNVDKALELNTDQYLASLLAPF*FSAPQL
Trigger: CAGCTGTGGGGCAGAAAAGCAGAAAGGAGCCAAGAG...TGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR GCA 90 bp AGCTCAAGGGAGCTAAGGTATTTGCTCCTTAGAATAGTGCTCAAGGTGGAGGCTCCAACAGAATACATGTaGATGTGGATGTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: SSRELRYLLLRIVLKVEAPTEYM*MWMSCD
Trigger: GTCACATGACATCCACATGCACATGTATTCTGTTGG...AGCCTCCACCTTGAGCACTATTCTAAGGAGCAAATACCTTAGCTCCCTTGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CCAGACCTACCAGGCCATTATTTAGATATTTGCTCCCATGGAACCCTCAAAGAAAGAGTCTGGAGAACGTaGTGGCCAACAGAATACATG +
Preference number: 4 (lower is better)
Translates to: PDLPGHYLDICSHGTLKERVWRT*WPTEYM
Trigger: CATGTATTCTGTTGGCCAGCACGTTCTCCAGACTCT...TTCTTTGAGGGTTCCATGGGAGCAAATATCTAAATAATGGCCTGGTAGGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp TGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATATCATGAAGTTCCTTGGATaGTTCTCCAGCAAGATCCAT +
Preference number: 4 (lower is better)
Translates to: WTGMGSHPDEHSNTKSYIMKFLG*FSSKIH
Trigger: ATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCAT...GATATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGACTTACGGCAGGTGTTaGTGGCAAGGCCTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: IFAPMEPSKKLRKIGLEWTYGRC*WQGLSC
Trigger: ACAGCTAAGGCCTTGCCAGCAACACCTGCCGTAAGT...CCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATACTTACGGCAGGTGTTaGTGGCAAGGCCTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: TDQYLASGFPEHRVLAFHTYGRC*WQGLSC
Trigger: ACAGCTAAGGCCTTGCCAGCAACACCTGCCGTAAGT...ATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCTGTATTTCTTCAACAGTGAGATTTGTATaGATACACTCTGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QPVTYGRCCWQGLSCISSTVRFV*IHSGVF
Trigger: GAAGACACCAGAGTGTATGCATACAAATCTCACTGT...TGAAGAAATACAGCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp CTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCATTCTTGACTTCCTCTTaGCTCACTCTCTGGCAAATA +
Preference number: 4 (lower is better)
Translates to: LPWNPQRNLGKLDWNGVPFLTSS*LTLWQI
Trigger: TATTTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAA...TGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp TGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCTGCCTTCAATACAGATCAATATTTaGCCTCAGGTTTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: WPQVFQSIESWHFIPLPSIQINI*PQVFQS
Trigger: GCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT...TGAAGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
3UTR CAA 72 bp TCTAGTTATGAGCACCTAGGGTCTTTCCCATCACTCTaGCAAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SSYEHLGSFPSL*QKCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACTTTTGCAAGAGTGATGGGAAAGACCCTAGGTGCTCATAACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp TTAGGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCCTGTGGCTTCGGCTTTaGGCGTACTTTGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LGYNVDKALELNTDQYLALWLRL*AYFASS
Trigger: AGAAGAGGCAAAGTACGCTCAAAGCCGAAGCCACAG...GGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAAATCAGGTTTTCCAGTaGTTCAGCCCATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGNQVFQ*FSPFLD
Trigger: GTCAAGAAATGGGCTGAATCACTGGAAAACCTGATT...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR TCA 90 bp CAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTTCTCCATCAGGTTaGAAATCTTCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QINIWPQVFQSIESWHFIPSPSG*KSSSGP
Trigger: AGGCCCAGAAGAAGATTTTCAACCTGATGGAGAAGG...GATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp ATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCCTTCTCCATCAGGTTaGAAATCTTCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: INIWPQVFQSIESWHFIPPSPSG*KSSSGP
Trigger: AGGCCCAGAAGAAGATTTTCAACCTGATGGAGAAGG...AGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp CATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCCAGACTAAGGAGCCTCATCTaGTGGCTAAGGTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: HTLWCLHFAAHYIGLKARLRSLI*WLRFSG
Trigger: TCCTGAGAACCTTAGCCATCAGATGAGGCTCCTTAG...TCTGGCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CCAACAATCTTTGAAAATCCAGACCTACCAGGCCATTATTTAGATATTTGCTCCAGAAGCCGGCAGACCTaGAAGCCCTTTGCACATCTT +
Preference number: 4 (lower is better)
Translates to: PTIFENPDLPGHYLDICSRSRQT*KPFAHL
Trigger: AAGATGTGCAAAGGGCTTGCAGGTCTGCCGGCTTCT...GGAGCAAATATCTAAATAATGGCCTGGTAGGTCTGGATTTTCAAAGATTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp TTAGGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCCTTTCTGCTTTTCTaGCCCACAGCTGGACGGGTT +
Preference number: 4 (lower is better)
Translates to: LGYNVDKALELNTDQYLASFLLF*PTAGRV
Trigger: AACCCGTCCAGCTGTGGGGCAGAAAAGCAGAAAGGA...GGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR GCA 90 bp AGATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATCTCTTGGCTCCTTTCTaGTTTTCTGCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: RYLLPWNPQRNLGKLDWNLLAPF*FSAPQL
Trigger: CAGCTGTGGGGCAGAAAAGCAGAAAGGAGCCAAGAG...ATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCTCTTGGCTCCTTTCTaGTTTTCTGCCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: MWIKHWSLIQINIWPQVFLLAPF*FSAPQL
Trigger: CAGCTGTGGGGCAGAAAAGCAGAAAGGAGCCAAGAG...GAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR GCA 90 bp TGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCTGCCTTCAGCTATATCTAGTTTATaGGTAGAAGTGACTCACACA +
Preference number: 4 (lower is better)
Translates to: WPQVFQSIESWHFIPLPSAISSL*VEVTHT
Trigger: TGTGTGAGTCACTTCTACGCATAAACTAGATATAGC...TGAAGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR GCA 90 bp ACTAACCAACCATCCCGAGGTAAAACTGTTGGGAGGAGGAAACTGCCAACAATCTTGGGAGGAGGAAACTaGCAACAATCTTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: TNQPSRGKTVGRRKLPTILGGGN*QQSLKI
Trigger: GATTTTCAAAGATTGTTGGCAGTTTCCTCCTCCCAA...GATTGTTGGCAGTTTCCTCCTCCCAACAGTTTTACCTCGGGATGGTTGGTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp GGTGCTCATGCATGTAATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCCCAACAGAATACATGTaGATGTGGATGTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: GAHACNLYWSNECSVCGRPTEYM*MWMSCD
Trigger: GTCACATGACATCCACATGCACATGTATTCTGTTGG...GCGTCCACATACACTGCATTCGTTGCTCCAGTATAAATTACATGCATGAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ACACTGATGAGGAACTCCAGGGATATTAAGGGCAAGATTGCCAGAGAGACAAGAATGAAGTTCCTTGGATaGTTCTCCAGCAAGATCCAT +
Preference number: 4 (lower is better)
Translates to: TLMRNSRDIKGKIARETRMKFLG*FSSKIH
Trigger: ATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCAT...TCTTGTCTCTCTGGCAATCTTGCCCTTAATATCCCTGGAGTTCCTCATCAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCCAGATACTGGAGCAACGAATaGAGTGTATGTGGACGCGTG +
Preference number: 4 (lower is better)
Translates to: HTLWCLHFAAHYIGLKARYWSNE*SVCGRV
Trigger: CACGCGTCCACATACACTGCATTCGTTGCTCCAGTA...TCTGGCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATTACTGGAGCAACGAATaGAGTGTATGTGGACGCGTG +
Preference number: 4 (lower is better)
Translates to: TDQYLASGFPEHRVLAFHYWSNE*SVCGRV
Trigger: CACGCGTCCACATACACTGCATTCGTTGCTCCAGTA...ATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp TTTTACAAAACCAACTTTCCACAGGTTAGCATTTCTTTCTTAGCCTACATGGCAATCAGACGACCGCTCTaGAGTACCAGCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: FYKTNFPQVSISFLAYMAIRRPL*STSSSV
Trigger: GACAGAGGAGCTGGTACTGCAGAGCGGTCGTCTGAT...TGCCATGTAGGCTAAGAAAGAAATGCTAACCTGTGGAAAGTTGGTTTTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR CCA 90 bp TGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCTGCCTTCATCTTATTTAACAGCTTaGAATTCGCAAGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: WPQVFQSIESWHFIPLPSSYLTA*NSQAGK
Trigger: CTTTCCTGCTTGCGAATTCCAAGCTGTTAAATAAGA...TGAAGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp CCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTCTTATTTAACAGCTTaGAATTCGCAAGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PWNPQRNLGKLDWNGVPPSYLTA*NSQAGK
Trigger: CTTTCCTGCTTGCGAATTCCAAGCTGTTAAATAAGA...GGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGATTCTTGACTTCCTCTTaGCTCACTCTCTGGCAAATA +
Preference number: 4 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGFLTSS*LTLWQI
Trigger: TATTTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAA...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR CCA 90 bp AAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTGGAATGAAATTAACAAGGGCTTGTCTCTTCCCTaGTGCAAGAATCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: KEMPPVSVSPDVWNEINKGLSLP*CKNPGS
Trigger: TGAACCTGGATTCTTGCACCAGGGAAGAGACAAGCC...CTTGTTAATTTCATTCCAAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp TGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCCAGAAAGGTGCTCCAGAGCATAGAGTCTTaGCATTTCATCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: WCLHFAAHYIGLKARKVLQSIES*HFIPLP
Trigger: AGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTG...GAGCACCTTTCTGGCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp GAACGTGCTGGCCAACAGAATACATGTGCATGTGGATGTCATGTGACATGCACTATACAGATCAATATTTaGCCTCAGGTTTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: ERAGQQNTCACGCHVTCTIQINI*PQVFQS
Trigger: GCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT...AGTGCATGTCACATGACATCCACATGCACATGTATTCTGTTGGCCAGCACGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp TGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCTGCCTTCAAGATATTTGCTCCCATaGAACCCTCAAAGAAACTTA +
Preference number: 4 (lower is better)
Translates to: WPQVFQSIESWHFIPLPSRYLLP*NPQRNL
Trigger: TAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCT...TGAAGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp TGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGGTCTGGAGAACGTGCTaGCCAACAGAATACATGTGC +
Preference number: 4 (lower is better)
Translates to: WIKHWSLIQINIWPQVFQVWRTC*PTEYMC
Trigger: GCACATGTATTCTGTTGGCCAGCACGTTCTCCAGAC...CTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp TTAGTCTCAGAGCCTAAAAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTAAAAGAAGGGAAGGCTaGCAGCTTAGGAGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LVSEPKKKCLQSLLAPMFKRREG*QLRSSK
Trigger: TTTTGAGCTCCTAAGCTGCCAGCCTTCCCTTCTTTT...AAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTTTTAGGCTCTGAGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp GGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCATACGGCAGGTGTTGCTaGCAAGGCCTTAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: GYNVDKALELNTDQYLASYGRCC*QGLSCI
Trigger: AATACAGCTAAGGCCTTGCCAGCAACACCTGCCGTA...TGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp CAACTCCATACCAACCCAGCTGCTAATAAGCATGCCCTGAGCACCCAGGAAAAGGTTAGCCCCGATGTTTaGAATGAAATTAACAAGATT +
Preference number: 4 (lower is better)
Translates to: QLHTNPAANKHALSTQEKVSPDV*NEINKI
Trigger: AATCTTGTTAATTTCATTCCAAACATCGGGGCTAAC...CTTTTCCTGGGTGCTCAGGGCATGCTTATTAGCAGCTGGGTTGGTATGGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp CCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCGCATGTAATTTATACTaGAGCAACGAATGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: PWNPQRNLGKLDWNGVPPACNLY*SNECSV
Trigger: TACACTGCATTCGTTGCTCCAGTATAAATTACATGC...GGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp GAACGTGCTGGCCAACAGAATACATGTGCATGTGGATGTCATGTGACATGCACTTGCAGCCCATTATATTaGCTTAAAAGCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: ERAGQQNTCACGCHVTCTCSPLY*LKSQKG
Trigger: ACCTTTCTGGCTTTTAAGCCAATATAATGGGCTGCA...AGTGCATGTCACATGACATCCACATGCACATGTATTCTGTTGGCCAGCACGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp CTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCAACCGAATATCTTTaGTATCTTCAACAGAACCTG +
Preference number: 4 (lower is better)
Translates to: LPWNPQRNLGKLDWNGVPPTEYL*YLQQNL
Trigger: CAGGTTCTGTTGAAGATACCAAAGATATTCGGTTGG...TGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367906.7
CDS-3UTR TCA 90 bp AATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCTGAATCAGGTTTTCCAGTaGTTCAGCCCATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: NIWPQVFQSIESWHFIPLNQVFQ*FSPFLD
Trigger: GTCAAGAAATGGGCTGAATCACTGGAAAACCTGATT...CAGAGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGATGTACTCTTCACAGCTaGTCCAGAAGTCAATATTCT +
Preference number: 4 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGCTLHS*SRSQYS
Trigger: AGAATATTGACTTCTGGATCAGCTGTGAAGAGTACA...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR TCA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCCCTTCTCCATCAGGTTaGAAATCTTCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: IQINIWPQVFQSIESWHFPSPSG*KSSSGP
Trigger: AGGCCCAGAAGAAGATTTTCAACCTGATGGAGAAGG...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp AGATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGATAGAATCGAGACTTaGGGAAGCGGCGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: RYLLPWNPQRNLGKLDWNDRIET*GSGGRN
Trigger: ATTCCTACCGCCGCTTCCTCAAGTCTCGATTCTATC...ATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp GCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGCACAGCTGGACGGGTTaGCCAAATCAAGATAGAATC +
Preference number: 4 (lower is better)
Translates to: ATMWIKHWSLIQINIWPQHSWTG*PNQDRI
Trigger: GATTCTATCTTGATTTGGTCAACCCGTCCAGCTGTG...CTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp ATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGCACAGCTGGACGGGTTaGCCAAATCAAGATAGAATC +
Preference number: 4 (lower is better)
Translates to: IFAPMEPSKKLRKIGLEWHSWTG*PNQDRI
Trigger: GATTCTATCTTGATTTGGTCAACCCGTCCAGCTGTG...CCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp TGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTCACAGCTGGACGGGTTaGCCAAATCAAGATAGAATC +
Preference number: 4 (lower is better)
Translates to: WSLIQINIWPQVFQSIESHSWTG*PNQDRI
Trigger: GATTCTATCTTGATTTGGTCAACCCGTCCAGCTGTG...AGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp AAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATCACAGCTGGACGGGTTaGCCAAATCAAGATAGAATC +
Preference number: 4 (lower is better)
Translates to: KALELNTDQYLASGFPEHHSWTG*PNQDRI
Trigger: GATTCTATCTTGATTTGGTCAACCCGTCCAGCTGTG...ATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp AATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTGGAAGCACAGTCTGCTaGACTCTTGGCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: NVDKALELNTDQYLASGFGSTVC*TLGSFL
Trigger: CAGAAAGGAGCCAAGAGTTCAGCAGACTGTGCTTCC...AAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp TTCACTGGAAGCATTAGCTTTGAGGCCTATCAAGCACATGATAGAAACAGGCATACTGCCAACAATCTTTaGAAATCCAGACCTACCAGG +
Preference number: 4 (lower is better)
Translates to: FTGSISFEAYQAHDRNRHTANNL*KSRPTR
Trigger: CCTGGTAGGTCTGGATTTTCAAAGATTGTTGGCAGT...ATGCCTGTTTCTATCATGTGCTTGATAGGCCTCAAAGCTAATGCTTCCAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp CTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAATTTCTTCATTAAGTTaGACATCCTGTCTGCCAACT +
Preference number: 4 (lower is better)
Translates to: LRKIGLEWGPTLMNTQTPISSLS*TSCLPT
Trigger: AGTTGGCAGACAGGATGTTCAACTTAATGAAGAAAT...TGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCAGGAATCAGATTTTTaGAGCAGGAAACCTAGCCGA +
Preference number: 4 (lower is better)
Translates to: INIWPQVFQSIESWHFIPQESDF*SRKPSR
Trigger: TCGGCTAGGTTTCCTGCTGCAAAAATCTGATTCCTG...AGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR GCA 90 bp ATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGTTGTCTCTTCCCTGGTaGAAGAATCCAGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: IFAPMEPSKKLRKIGLEWLSLPW*KNPGSP
Trigger: AGGTGAACCTGGATTCTTGCACCAGGGAAGAGACAA...CCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp TGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTTGTCTCTTCCCTGGTaGAAGAATCCAGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: WSLIQINIWPQVFQSIESLSLPW*KNPGSP
Trigger: AGGTGAACCTGGATTCTTGCACCAGGGAAGAGACAA...AGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR GCA 90 bp ACCTGCATCTTTAATACAGTGAGATTTGTATGCATACACTCTGGTGTCTTCATTTCCTTTCTGCTTTTCTaGCCCACAGCTGGACGGGTT +
Preference number: 4 (lower is better)
Translates to: TCIFNTVRFVCIHSGVFISFLLF*PTAGRV
Trigger: AACCCGTCCAGCTGTGGGGCAGAAAAGCAGAAAGGA...AATGAAGACACCAGAGTGTATGCATACAAATCTCACTGTATTAAAGATGCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp GGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGCATTTCATCCCTCTaGCTTCAGGTGAGAATTAGG +
Preference number: 4 (lower is better)
Translates to: GYNVDKALELNTDQYLASGISSL*LQVRIR
Trigger: CCTAATTCTCACCTGAAGGCAGAGGGATGAAATGCC...TGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR GCA 90 bp ATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGCATTTCATCCCTCTaGCTTCAGGTGAGAATTAGG +
Preference number: 4 (lower is better)
Translates to: IFAPMEPSKKLRKIGLEWGISSL*LQVRIR
Trigger: CCTAATTCTCACCTGAAGGCAGAGGGATGAAATGCC...CCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCGGCATTTCATCCCTCTaGCTTCAGGTGAGAATTAGG +
Preference number: 4 (lower is better)
Translates to: IQINIWPQVFQSIESWHFGISSL*LQVRIR
Trigger: CCTAATTCTCACCTGAAGGCAGAGGGATGAAATGCC...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR GCA 90 bp GAACGTGCTGGCCAACAGAATACATGTGCATGTGGATGTCATGTGACATGCACTGCTATATCTAGTTTATaGGTAGAAGTGACTCACACA +
Preference number: 4 (lower is better)
Translates to: ERAGQQNTCACGCHVTCTAISSL*VEVTHT
Trigger: TGTGTGAGTCACTTCTACGCATAAACTAGATATAGC...AGTGCATGTCACATGACATCCACATGCACATGTATTCTGTTGGCCAGCACGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp GCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGGATGTCATGTGACATaGACTAACCAACCATCCCGA +
Preference number: 4 (lower is better)
Translates to: ATMWIKHWSLIQINIWPQGCHVT*TNQPSR
Trigger: TCGGGATGGTTGGTTAGTGCATGTCACATGACATCC...CTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AAAACAGTAACCTTTAACTTCTATGCCCTCACTCAGCCAGTAACTTACGGCAGGCCAACAGAATACATGTaGATGTGGATGTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: KTVTFNFYALTQPVTYGRPTEYM*MWMSCD
Trigger: GTCACATGACATCCACATGCACATGTATTCTGTTGG...CCTGCCGTAAGTTACTGGCTGAGTGAGGGCATAGAAGTTAAAGGTTACTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAATTAGGAGCTCAAAAGTaGCATCAGAGAAAACCAGCT +
Preference number: 4 (lower is better)
Translates to: KKLRKIGLEWGPTLMNTQLGAQK*HQRKPA
Trigger: AGCTGGTTTTCTCTGATGGCACTTTTGAGCTCCTAA...TTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp TTAGGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCGTGGACGCGTGTGTGTaGACTTTGAAAGGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: LGYNVDKALELNTDQYLAVDACV*TLKGSS
Trigger: ACTACTGCCTTTCAAAGTGCACACACACGCGTCCAC...GGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp GGAACTCCAGGGATATTAAGGGCAAGATTGCCAGAGAGACAAGAAGGGTACAATCCCTTATTATTAAGATaGGTGTGTTTCACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GTPGILRARLPERQEGYNPLLLR*VCFTGS
Trigger: GCTTCCAGTGAAACACACGCATCTTAATAATAAGGG...ATTGTACCCTTCTTGTCTCTCTGGCAATCTTGCCCTTAATATCCCTGGAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp ATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCGGCTTGTCTCTTCCCTaGTGCAAGAATCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: MWIKHWSLIQINIWPQVFGLSLP*CKNPGS
Trigger: TGAACCTGGATTCTTGCACCAGGGAAGAGACAAGCC...GAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CCA 90 bp ATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGCAGAGCATAGAGTCTTaGCATTTCATCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: IFAPMEPSKKLRKIGLEWQSIES*HFIPLP
Trigger: AGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTG...CCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp GGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCACAGAGCATAGAGTCTTaGCATTTCATCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GYNVDKALELNTDQYLASQSIES*HFIPLP
Trigger: AGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTG...TGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CCA 90 bp AAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAAAATTGGACTGGAATaGGGTCCCACCCTGATGAAC +
Preference number: 4 (lower is better)
Translates to: KALELNTDQYLASGFPEHKIGLE*GPTLMN
Trigger: GTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTT...ATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp TGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAAAATTGGACTGGAATaGGGTCCCACCCTGATGAAC +
Preference number: 4 (lower is better)
Translates to: WIKHWSLIQINIWPQVFQKIGLE*GPTLMN
Trigger: GTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTT...CTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp GGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAAAAATTGGACTGGAATaGGGTCCCACCCTGATGAAC +
Preference number: 4 (lower is better)
Translates to: GYNVDKALELNTDQYLASKIGLE*GPTLMN
Trigger: GTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTT...TGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp AATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATTGCAGCCCATTATATTaGCTTAAAAGCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: NWTGMGSHPDEHSNTKSYCSPLY*LKSQKG
Trigger: ACCTTTCTGGCTTTTAAGCCAATATAATGGGCTGCA...ATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp TTAGTCTCAGAGCCTAAAAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTTGTATGCATACACTCTaGTGTCTTCATTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LVSEPKKKCLQSLLAPMFCMHTL*CLHFAA
Trigger: GGCTGCAAAATGAAGACACCAGAGTGTATGCATACA...AAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTTTTAGGCTCTGAGACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp AGATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATTTTCCAAAAGGGAGCTaGCAGGATCATCGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RYLLPWNPQRNLGKLDWNFPKGS*QDHRLH
Trigger: GTGGAGACGATGATCCTGCCAGCTCCCTTTTGGAAA...ATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421743.6
3UTR CAA 72 bp GTGGATAAAGCACTGGAGCTTAATACAGATCAATATTaGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VDKALELNTDQY*ASGFPEHRVLA
Trigger: TGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp GCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGCATGTGGATGTCATGTaGCATGCACTAACCAACCAT +
Preference number: 4 (lower is better)
Translates to: ATMWIKHWSLIQINIWPQHVDVM*HALTNH
Trigger: ATGGTTGGTTAGTGCATGTCACATGACATCCACATG...CTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp CATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCCAGACATGTGGATGTCATGTaGCATGCACTAACCAACCAT +
Preference number: 4 (lower is better)
Translates to: HTLWCLHFAAHYIGLKARHVDVM*HALTNH
Trigger: ATGGTTGGTTAGTGCATGTCACATGACATCCACATG...TCTGGCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp GGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGCTTTGAGCGTACTTTaGCTCTTCTCCGGTAAAGAT +
Preference number: 4 (lower is better)
Translates to: GYNVDKALELNTDQYLASALSVL*LFSGKD
Trigger: ATCTTTACCGGAGAAGAGGCAAAGTACGCTCAAAGC...TGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp TTCACTGGAAGCATTAGCTTTGAGGCCTATCAAGCACATGATAGAAACAGGCATGACCTGCAAGCCCTTTaGACATCTTATTTAACAGCT +
Preference number: 4 (lower is better)
Translates to: FTGSISFEAYQAHDRNRHDLQAL*TSYLTA
Trigger: AGCTGTTAAATAAGATGTGCAAAGGGCTTGCAGGTC...ATGCCTGTTTCTATCATGTGCTTGATAGGCCTCAAAGCTAATGCTTCCAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAATGTTTCATATCTTTTaGACTCCTCAAGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGMFHIF*TPQARS
Trigger: GCTTCTTGCTTGAGGAGTGCAAAAGATATGAAACAT...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000531057.5
CDS-3UTR GCA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCCAGGAATCAGATTTTTaGAGCAGGAAACCTAGCCGA +
Preference number: 4 (lower is better)
Translates to: IQINIWPQVFQSIESWHFQESDF*SRKPSR
Trigger: TCGGCTAGGTTTCCTGCTGCAAAAATCTGATTCCTG...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR GCA 90 bp CATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCCAGACAGGAATCAGATTTTTaGAGCAGGAAACCTAGCCGA +
Preference number: 4 (lower is better)
Translates to: HTLWCLHFAAHYIGLKARQESDF*SRKPSR
Trigger: TCGGCTAGGTTTCCTGCTGCAAAAATCTGATTCCTG...TCTGGCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp GGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCACAGGAATCAGATTTTTaGAGCAGGAAACCTAGCCGA +
Preference number: 4 (lower is better)
Translates to: GYNVDKALELNTDQYLASQESDF*SRKPSR
Trigger: TCGGCTAGGTTTCCTGCTGCAAAAATCTGATTCCTG...TGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR GCA 90 bp AAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATGAAAGCTTTGAAAGCTaGCAGCCCACATTCATGACT +
Preference number: 4 (lower is better)
Translates to: KALELNTDQYLASGFPEHESFES*QPTFMT
Trigger: AGTCATGAATGTGGGCTGGCAGCTTTCAAAGCTTTC...ATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR GCA 90 bp CTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACATTATTTAGATATTTaGTCCCATGGAACCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LPWNPQRNLGKLDWNGVPHYLDI*SHGTLK
Trigger: TTTGAGGGTTCCATGGGAGCAAATATCTAAATAATG...TGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp TTAGGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCGGATGTCATGTGACATaGACTAACCAACCATCCCGA +
Preference number: 4 (lower is better)
Translates to: LGYNVDKALELNTDQYLAGCHVT*TNQPSR
Trigger: TCGGGATGGTTGGTTAGTGCATGTCACATGACATCC...GGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp TTAGGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCAGAGTCTGGAGAACGTaGTGGCCAACAGAATACATG +
Preference number: 4 (lower is better)
Translates to: LGYNVDKALELNTDQYLARVWRT*WPTEYM
Trigger: CATGTATTCTGTTGGCCAGCACGTTCTCCAGACTCT...GGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTGGAATGAAATTAACAAGGAGCCTAAAAAGAAATaGCTCCAGTCTCTGTTAGCC +
Preference number: 4 (lower is better)
Translates to: KEMPPVSVSPDVWNEINKEPKKK*LQSLLA
Trigger: GGCTAACAGAGACTGGAGGCATTTCTTTTTAGGCTC...CTTGTTAATTTCATTCCAAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACAACAGTGAGATTTGTATaGATACACTCTGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KLRKIGLEWGPTLMNTQTTVRFV*IHSGVF
Trigger: GAAGACACCAGAGTGTATGCATACAAATCTCACTGT...TGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGATCTTATTTAACAGCTTaGAATTCGCAAGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGSYLTA*NSQAGK
Trigger: CTTTCCTGCTTGCGAATTCCAAGCTGTTAAATAAGA...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000531057.5
CDS-3UTR CCA 90 bp ATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTTTCTTGACTTCCTCTTaGCTCACTCTCTGGCAAATA +
Preference number: 4 (lower is better)
Translates to: INIWPQVFQSIESWHFIPFLTSS*LTLWQI
Trigger: TATTTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAA...AGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CCA 90 bp TATGCATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCCAGAGCATAGAGTCTTaGCATTTCATCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: YAYTLVSSFCSPLYWLKSQSIES*HFIPLP
Trigger: AGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTG...GCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp ATACACACAAGCACATATCATAGCTCAACCTCATCTAAACATCTAGAGTCTGGAAAAATTGGACTGGAATaGGGTCCCACCCTGATGAAC +
Preference number: 4 (lower is better)
Translates to: IHTSTYHSSTSSKHLESGKIGLE*GPTLMN
Trigger: GTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTT...TCCAGACTCTAGATGTTTAGATGAGGTTGAGCTATGATATGTGCTTGTGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp CAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCAAGCATGAAGTTCCTTaGATGCTTCTCCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: QINIWPQVFQSIESWHFIKHEVP*MLLQQD
Trigger: ATCTTGCTGGAGAAGCATCCAAGGAACTTCATGCTT...GATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp AATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATTCTTTCCCCTGCTGCTaGTTTATAAATATAGGCATA +
Preference number: 4 (lower is better)
Translates to: NWTGMGSHPDEHSNTKSYSFPCC*FINIGI
Trigger: TATGCCTATATTTATAAACCAGCAGCAGGGGAAAGA...ATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp TTCACTGGAAGCATTAGCTTTGAGGCCTATCAAGCACATGATAGAAACAGGCATTGTATGCATACACTCTaGTGTCTTCATTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FTGSISFEAYQAHDRNRHCMHTL*CLHFAA
Trigger: GGCTGCAAAATGAAGACACCAGAGTGTATGCATACA...ATGCCTGTTTCTATCATGTGCTTGATAGGCCTCAAAGCTAATGCTTCCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp ACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATAATCAGGTTTTCCAGTaGTTCAGCCCATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: TDQYLASGFPEHRVLAFHNQVFQ*FSPFLD
Trigger: GTCAAGAAATGGGCTGAATCACTGGAAAACCTGATT...ATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp ATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTTGTACTCTTCACAGCTaGTCCAGAAGTCAATATTCT +
Preference number: 4 (lower is better)
Translates to: INIWPQVFQSIESWHFIPCTLHS*SRSQYS
Trigger: AGAATATTGACTTCTGGATCAGCTGTGAAGAGTACA...AGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp TGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCCAGAAAGGTGCTCTGTACTCTTCACAGCTaGTCCAGAAGTCAATATTCT +
Preference number: 4 (lower is better)
Translates to: WCLHFAAHYIGLKARKVLCTLHS*SRSQYS
Trigger: AGAATATTGACTTCTGGATCAGCTGTGAAGAGTACA...GAGCACCTTTCTGGCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp TATGCATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCACTTCTCATTCAGCGTaGCCTTCCAGACCTATTAGT +
Preference number: 4 (lower is better)
Translates to: YAYTLVSSFCSPLYWLKSTSHSA*PSRPIS
Trigger: ACTAATAGGTCTGGAAGGTCACGCTGAATGAGAAGT...GCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp ACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTAGAGAAATAGCTGGATaGCAGACAGTTATAAGCCCG +
Preference number: 4 (lower is better)
Translates to: TMWIKHWSLIQINIWPQVREIAG*QTVISP
Trigger: CGGGCTTATAACTGTCTGTCATCCAGCTATTTCTCT...AACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR TCA 90 bp GGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAACATGGTCCAAGATCTaGTCCTCACGATTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: GYNVDKALELNTDQYLASTWSKI*SSRFPK
Trigger: TTTTGGAAATCGTGAGGATCAGATCTTGGACCATGT...TGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR GCA 90 bp TATTTGCTCCTTAGAATAGTGCTCAAGGTGGAGGCTGTCAGTGGTCAAATCAAGATGTTTCATATCTTTTaGACTCCTCAAGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: YLLLRIVLKVEAVSGQIKMFHIF*TPQARS
Trigger: GCTTCTTGCTTGAGGAGTGCAAAAGATATGAAACAT...CTTGATTTGACCACTGACAGCCTCCACCTTGAGCACTATTCTAAGGAGCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTTTGTCTCTTCCCTGGTaGAAGAATCCAGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: NVDKALELNTDQYLASGFLSLPW*KNPGSP
Trigger: AGGTGAACCTGGATTCTTGCACCAGGGAAGAGACAA...AAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR GCA 90 bp ACCTGCATCTTTAATACAGTGAGATTTGTATGCATACACTCTGGTGTCTTCATTTTGTCTCTTCCCTGGTaGAAGAATCCAGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: TCIFNTVRFVCIHSGVFILSLPW*KNPGSP
Trigger: AGGTGAACCTGGATTCTTGCACCAGGGAAGAGACAA...AATGAAGACACCAGAGTGTATGCATACAAATCTCACTGTATTAAAGATGCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CTGGAAGCATTAGCTTTGAGGCCTATCAAGCACATGATAGAAACAGGCATGCAAGCTATATCTAGTTTATaGGTAGAAGTGACTCACACA +
Preference number: 4 (lower is better)
Translates to: LEALALRPIKHMIETGMQAISSL*VEVTHT
Trigger: TGTGTGAGTCACTTCTACGCATAAACTAGATATAGC...TTGCATGCCTGTTTCTATCATGTGCTTGATAGGCCTCAAAGCTAATGCTTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTGGAATGAAATTAACAAGATGAAGTTCCTTGGATaGTTCTCCAGCAAGATCCAT +
Preference number: 4 (lower is better)
Translates to: KEMPPVSVSPDVWNEINKMKFLG*FSSKIH
Trigger: ATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCAT...CTTGTTAATTTCATTCCAAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ATACACACAAGCACATATCATAGCTCAACCTCATCTAAACATCTAGAGTCTGGAGAGCCTAAAAAGAAATaGCTCCAGTCTCTGTTAGCC +
Preference number: 4 (lower is better)
Translates to: IHTSTYHSSTSSKHLESGEPKKK*LQSLLA
Trigger: GGCTAACAGAGACTGGAGGCATTTCTTTTTAGGCTC...TCCAGACTCTAGATGTTTAGATGAGGTTGAGCTATGATATGTGCTTGTGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp TATGCATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCGAGCCTAAAAAGAAATaGCTCCAGTCTCTGTTAGCC +
Preference number: 4 (lower is better)
Translates to: YAYTLVSSFCSPLYWLKSEPKKK*LQSLLA
Trigger: GGCTAACAGAGACTGGAGGCATTTCTTTTTAGGCTC...GCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp TTAGGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCTTGGCTCACTCTCTaGCAAATAACCACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LGYNVDKALELNTDQYLASWLTL*QITTLS
Trigger: GGACAAAGTGGTTATTTGCCAGAGAGTGAGCCAAGA...GGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CCA 90 bp AAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATTTCTTGACTTCCTCTTaGCTCACTCTCTGGCAAATA +
Preference number: 4 (lower is better)
Translates to: KALELNTDQYLASGFPEHFLTSS*LTLWQI
Trigger: TATTTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAA...ATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CCA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAATGTGGATAAAGCACTaGAGCTTAATACAGATCAAT +
Preference number: 4 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGMWIKH*SLIQIN
Trigger: ATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR CCA 90 bp AAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACTCCAGCAAGATCCATaGAATTTTACAAAACCAACT +
Preference number: 4 (lower is better)
Translates to: KLRKIGLEWGPTLMNTQTLQQDP*NFTKPT
Trigger: AGTTGGTTTTGTAAAATTCCATGGATCTTGCTGGAG...TGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp AAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAAGCATGAAGTTCCTTaGATGCTTCTCCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: KALELNTDQYLASGFPEHKHEVP*MLLQQD
Trigger: ATCTTGCTGGAGAAGCATCCAAGGAACTTCATGCTT...ATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp CCAACAATCTTTGAAAATCCAGACCTACCAGGCCATTATTTAGATATTTGCTCCAAAAGAAGGGAAGGCTaGCAGCTTAGGAGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: PTIFENPDLPGHYLDICSKRREG*QLRSSK
Trigger: TTTTGAGCTCCTAAGCTGCCAGCCTTCCCTTCTTTT...GGAGCAAATATCTAAATAATGGCCTGGTAGGTCTGGATTTTCAAAGATTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp GTGCTCATGCATGTAATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCGGTTAGCCCCGATGTTTaGAATGAAATTAACAAGATT +
Preference number: 4 (lower is better)
Translates to: VLMHVIYTGATNAVYVDAVSPDV*NEINKI
Trigger: AATCTTGTTAATTTCATTCCAAACATCGGGGCTAAC...CGCGTCCACATACACTGCATTCGTTGCTCCAGTATAAATTACATGCATGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp ATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTGTGGAGAGAAATAGCTaGATGACAGACAGTTATAAG +
Preference number: 4 (lower is better)
Translates to: INIWPQVFQSIESWHFIPVERNS*MTDSYK
Trigger: CTTATAACTGTCTGTCATCCAGCTATTTCTCTCCAC...AGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR TCA 90 bp GCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGTGTACTCTTCACAGCTaGTCCAGAAGTCAATATTCT +
Preference number: 4 (lower is better)
Translates to: ATMWIKHWSLIQINIWPQCTLHS*SRSQYS
Trigger: AGAATATTGACTTCTGGATCAGCTGTGAAGAGTACA...CTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp ATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCTGGTCAAATCAAGCATaGAGTTCCTTGGATGCTTCT +
Preference number: 4 (lower is better)
Translates to: MWIKHWSLIQINIWPQVFWSNQA*SSLDAS
Trigger: AGAAGCATCCAAGGAACTTCATGCTTGATTTGACCA...GAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp CAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCATTTCTTCATTAAGTTaGACATCCTGTCTGCCAACT +
Preference number: 4 (lower is better)
Translates to: QINIWPQVFQSIESWHFIISSLS*TSCLPT
Trigger: AGTTGGCAGACAGGATGTTCAACTTAATGAAGAAAT...GATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp ACCTGCATCTTTAATACAGTGAGATTTGTATGCATACACTCTGGTGTCTTCATTACTTCTCATTCAGCGTaGCCTTCCAGACCTATTAGT +
Preference number: 4 (lower is better)
Translates to: TCIFNTVRFVCIHSGVFITSHSA*PSRPIS
Trigger: ACTAATAGGTCTGGAAGGTCACGCTGAATGAGAAGT...AATGAAGACACCAGAGTGTATGCATACAAATCTCACTGTATTAAAGATGCAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp ATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCATATGCCCGTCATTTTaGCCAACCGAATATCTTTGG +
Preference number: 4 (lower is better)
Translates to: MWIKHWSLIQINIWPQVFICPSF*PTEYLW
Trigger: CCAAAGATATTCGGTTGGTCAAAATGACGGGCATAT...GAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367906.7
CDS-3UTR GCA 90 bp TTTTACAAAACCAACTTTCCACAGGTTAGCATTTCTTTCTTAGCCTACATGGCAGCTTTGAGCGTACTTTaGCTCTTCTCCGGTAAAGAT +
Preference number: 4 (lower is better)
Translates to: FYKTNFPQVSISFLAYMAALSVL*LFSGKD
Trigger: ATCTTTACCGGAGAAGAGGCAAAGTACGCTCAAAGC...TGCCATGTAGGCTAAGAAAGAAATGCTAACCTGTGGAAAGTTGGTTTTGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTGACCTGCAAGCCCTTTaGACATCTTATTTAACAGCT +
Preference number: 4 (lower is better)
Translates to: TMWIKHWSLIQINIWPQVDLQAL*TSYLTA
Trigger: AGCTGTTAAATAAGATGTGCAAAGGGCTTGCAGGTC...AACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ACCTGCATCTTTAATACAGTGAGATTTGTATGCATACACTCTGGTGTCTTCATTGAAAGCTTTGAAAGCTaGCAGCCCACATTCATGACT +
Preference number: 4 (lower is better)
Translates to: TCIFNTVRFVCIHSGVFIESFES*QPTFMT
Trigger: AGTCATGAATGTGGGCTGGCAGCTTTCAAAGCTTTC...AATGAAGACACCAGAGTGTATGCATACAAATCTCACTGTATTAAAGATGCAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp TTTTACAAAACCAACTTTCCACAGGTTAGCATTTCTTTCTTAGCCTACATGGCAGAAAGCTTTGAAAGCTaGCAGCCCACATTCATGACT +
Preference number: 4 (lower is better)
Translates to: FYKTNFPQVSISFLAYMAESFES*QPTFMT
Trigger: AGTCATGAATGTGGGCTGGCAGCTTTCAAAGCTTTC...TGCCATGTAGGCTAAGAAAGAAATGCTAACCTGTGGAAAGTTGGTTTTGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp TATTTGCTCCTTAGAATAGTGCTCAAGGTGGAGGCTGTCAGTGGTCAAATCAAGCATTATTTAGATATTTaGTCCCATGGAACCCTCAAA +
Preference number: 4 (lower is better)
Translates to: YLLLRIVLKVEAVSGQIKHYLDI*SHGTLK
Trigger: TTTGAGGGTTCCATGGGAGCAAATATCTAAATAATG...CTTGATTTGACCACTGACAGCCTCCACCTTGAGCACTATTCTAAGGAGCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCTTGGGAGGAGGAAACTaGCAACAATCTTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: IQINIWPQVFQSIESWHFLGGGN*QQSLKI
Trigger: GATTTTCAAAGATTGTTGGCAGTTTCCTCCTCCCAA...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATTTGGGAGGAGGAAACTaGCAACAATCTTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: KALELNTDQYLASGFPEHLGGGN*QQSLKI
Trigger: GATTTTCAAAGATTGTTGGCAGTTTCCTCCTCCCAA...ATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ATACACACAAGCACATATCATAGCTCAACCTCATCTAAACATCTAGAGTCTGGACTTTCCCATCACTCTTaGAAAAGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: IHTSTYHSSTSSKHLESGLSHHS*KSVCVC
Trigger: ACACACACACACACTTTTGCAAGAGTGATGGGAAAG...TCCAGACTCTAGATGTTTAGATGAGGTTGAGCTATGATATGTGCTTGTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCTTAGGAGCTCAAAAGTaGCATCAGAGAAAACCAGCT +
Preference number: 4 (lower is better)
Translates to: MWIKHWSLIQINIWPQVFLGAQK*HQRKPA
Trigger: AGCTGGTTTTCTCTGATGGCACTTTTGAGCTCCTAA...GAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp CCAACAATCTTTGAAAATCCAGACCTACCAGGCCATTATTTAGATATTTGCTCCTTAGGAGCTCAAAAGTaGCATCAGAGAAAACCAGCT +
Preference number: 4 (lower is better)
Translates to: PTIFENPDLPGHYLDICSLGAQK*HQRKPA
Trigger: AGCTGGTTTTCTCTGATGGCACTTTTGAGCTCCTAA...GGAGCAAATATCTAAATAATGGCCTGGTAGGTCTGGATTTTCAAAGATTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp GTAAGTACATACACATACTCTAGTTATGAGCACCTAGGGTCTTTCCCATCACTCTCTTATTTAACAGCTTaGAATTCGCAAGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VSTYTYSSYEHLGSFPSLSYLTA*NSQAGK
Trigger: CTTTCCTGCTTGCGAATTCCAAGCTGTTAAATAAGA...GAGTGATGGGAAAGACCCTAGGTGCTCATAACTAGAGTATGTGTATGTACTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp ATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCTTCTTGACTTCCTCTTaGCTCACTCTCTGGCAAATA +
Preference number: 4 (lower is better)
Translates to: MWIKHWSLIQINIWPQVFFLTSS*LTLWQI
Trigger: TATTTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAA...GAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CCA 90 bp GGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAATACAGATCAATATTTaGCCTCAGGTTTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GYNVDKALELNTDQYLASIQINI*PQVFQS
Trigger: GCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT...TGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CCA 90 bp TATGCATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCAAGCATGAAGTTCCTTaGATGCTTCTCCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: YAYTLVSSFCSPLYWLKSKHEVP*MLLQQD
Trigger: ATCTTGCTGGAGAAGCATCCAAGGAACTTCATGCTT...GCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp ACCTGCATCTTTAATACAGTGAGATTTGTATGCATACACTCTGGTGTCTTCATTAAAAGAAGGGAAGGCTaGCAGCTTAGGAGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: TCIFNTVRFVCIHSGVFIKRREG*QLRSSK
Trigger: TTTTGAGCTCCTAAGCTGCCAGCCTTCCCTTCTTTT...AATGAAGACACCAGAGTGTATGCATACAAATCTCACTGTATTAAAGATGCAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp ATACACACAAGCACATATCATAGCTCAACCTCATCTAAACATCTAGAGTCTGGATGTATGCATACACTCTaGTGTCTTCATTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: IHTSTYHSSTSSKHLESGCMHTL*CLHFAA
Trigger: GGCTGCAAAATGAAGACACCAGAGTGTATGCATACA...TCCAGACTCTAGATGTTTAGATGAGGTTGAGCTATGATATGTGCTTGTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCTTGCGGAAGTTGCCTTaGTTGTTATGCAAACAAGAA +
Preference number: 4 (lower is better)
Translates to: IQINIWPQVFQSIESWHFLRKLP*LLCKQE
Trigger: TTCTTGTTTGCATAACAACCAAGGCAACTTCCGCAA...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR TCA 90 bp TTAGGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTGTACTCTTCACAGCTaGTCCAGAAGTCAATATTCT +
Preference number: 4 (lower is better)
Translates to: LGYNVDKALELNTDQYLACTLHS*SRSQYS
Trigger: AGAATATTGACTTCTGGATCAGCTGTGAAGAGTACA...GGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp AAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTGGAATGAAATTAACAAGTTTGGTTGCCTGGACTaGGATGAATTCATTATAGAT +
Preference number: 4 (lower is better)
Translates to: KEMPPVSVSPDVWNEINKFGCLD*DEFIID
Trigger: ATCTATAATGAATTCATCTCAGTCCAGGCAACCAAA...CTTGTTAATTTCATTCCAAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCTTTGGTTGCCTGGACTaGGATGAATTCATTATAGAT +
Preference number: 4 (lower is better)
Translates to: IQINIWPQVFQSIESWHFFGCLD*DEFIID
Trigger: ATCTATAATGAATTCATCTCAGTCCAGGCAACCAAA...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp TGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTTTGGTTGCCTGGACTaGGATGAATTCATTATAGAT +
Preference number: 4 (lower is better)
Translates to: WSLIQINIWPQVFQSIESFGCLD*DEFIID
Trigger: ATCTATAATGAATTCATCTCAGTCCAGGCAACCAAA...AGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR TCA 90 bp TTTTACAAAACCAACTTTCCACAGGTTAGCATTTCTTTCTTAGCCTACATGGCATGGTCAAATCAAGCATaGAGTTCCTTGGATGCTTCT +
Preference number: 4 (lower is better)
Translates to: FYKTNFPQVSISFLAYMAWSNQA*SSLDAS
Trigger: AGAAGCATCCAAGGAACTTCATGCTTGATTTGACCA...TGCCATGTAGGCTAAGAAAGAAATGCTAACCTGTGGAAAGTTGGTTTTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATATGTTTCATATCTTTTaGACTCCTCAAGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: TDQYLASGFPEHRVLAFHMFHIF*TPQARS
Trigger: GCTTCTTGCTTGAGGAGTGCAAAAGATATGAAACAT...ATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp GCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGCTATATCTAGTTTATaGGTAGAAGTGACTCACACA +
Preference number: 4 (lower is better)
Translates to: ATMWIKHWSLIQINIWPQAISSL*VEVTHT
Trigger: TGTGTGAGTCACTTCTACGCATAAACTAGATATAGC...CTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR GCA 90 bp ACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTACAGTGAGATTTGTATaGATACACTCTGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: TMWIKHWSLIQINIWPQVTVRFV*IHSGVF
Trigger: GAAGACACCAGAGTGTATGCATACAAATCTCACTGT...AACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATATGTTTCATATCTTTTaGATTTGCCTCTTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: KALELNTDQYLASGFPEHMFHIF*ICLFSG
Trigger: ACCGGAGAAGAGGCAAATGCAAAAGATATGAAACAT...ATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527809.5
CDS-3UTR CCA 90 bp ATACACACAAGCACATATCATAGCTCAACCTCATCTAAACATCTAGAGTCTGGAATACAGATCAATATTTaGCCTCAGGTTTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: IHTSTYHSSTSSKHLESGIQINI*PQVFQS
Trigger: GCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT...TCCAGACTCTAGATGTTTAGATGAGGTTGAGCTATGATATGTGCTTGTGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp ATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTATGTGGATAAAGCACTaGAGCTTAATACAGATCAAT +
Preference number: 4 (lower is better)
Translates to: INIWPQVFQSIESWHFIPMWIKH*SLIQIN
Trigger: ATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT...AGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CCA 90 bp ACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATAGATATTTGCTCCCATaGAACCCTCAAAGAAACTTA +
Preference number: 4 (lower is better)
Translates to: TDQYLASGFPEHRVLAFHRYLLP*NPQRNL
Trigger: TAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCT...ATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp AAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTGGAATGAAATTAACAAGAGATATTTGCTCCCATaGAACCCTCAAAGAAACTTA +
Preference number: 4 (lower is better)
Translates to: KEMPPVSVSPDVWNEINKRYLLP*NPQRNL
Trigger: TAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCT...CTTGTTAATTTCATTCCAAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp CATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCCAGAGCATGTAATTTATACTaGAGCAACGAATGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: HTLWCLHFAAHYIGLKARACNLY*SNECSV
Trigger: TACACTGCATTCGTTGCTCCAGTATAAATTACATGC...TCTGGCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp AGATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATTTTGGTTGCCTGGACTaGGATGAATTCATTATAGAT +
Preference number: 4 (lower is better)
Translates to: RYLLPWNPQRNLGKLDWNFGCLD*DEFIID
Trigger: ATCTATAATGAATTCATCTCAGTCCAGGCAACCAAA...ATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp AGATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATATGTTTCATATCTTTTaGACTCCTCAAGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RYLLPWNPQRNLGKLDWNMFHIF*TPQARS
Trigger: GCTTCTTGCTTGAGGAGTGCAAAAGATATGAAACAT...ATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ATACACACAAGCACATATCATAGCTCAACCTCATCTAAACATCTAGAGTCTGGAGCTATATCTAGTTTATaGGTAGAAGTGACTCACACA +
Preference number: 4 (lower is better)
Translates to: IHTSTYHSSTSSKHLESGAISSL*VEVTHT
Trigger: TGTGTGAGTCACTTCTACGCATAAACTAGATATAGC...TCCAGACTCTAGATGTTTAGATGAGGTTGAGCTATGATATGTGCTTGTGTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp GCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGCATTATTTAGATATTTaGTCCCATGGAACCCTCAAA +
Preference number: 4 (lower is better)
Translates to: ATMWIKHWSLIQINIWPQHYLDI*SHGTLK
Trigger: TTTGAGGGTTCCATGGGAGCAAATATCTAAATAATG...CTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR GCA 90 bp ACCTGCATCTTTAATACAGTGAGATTTGTATGCATACACTCTGGTGTCTTCATTCCCTTATTATTAAGATaGGTGTGTTTCACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TCIFNTVRFVCIHSGVFIPLLLR*VCFTGS
Trigger: GCTTCCAGTGAAACACACGCATCTTAATAATAAGGG...AATGAAGACACCAGAGTGTATGCATACAAATCTCACTGTATTAAAGATGCAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp TGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTATGTGGATAAAGCACTaGAGCTTAATACAGATCAAT +
Preference number: 4 (lower is better)
Translates to: WSLIQINIWPQVFQSIESMWIKH*SLIQIN
Trigger: ATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT...AGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CCA 90 bp CCAACAATCTTTGAAAATCCAGACCTACCAGGCCATTATTTAGATATTTGCTCCCTCCAGCAAGATCCATaGAATTTTACAAAACCAACT +
Preference number: 4 (lower is better)
Translates to: PTIFENPDLPGHYLDICSLQQDP*NFTKPT
Trigger: AGTTGGTTTTGTAAAATTCCATGGATCTTGCTGGAG...GGAGCAAATATCTAAATAATGGCCTGGTAGGTCTGGATTTTCAAAGATTGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp AGATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATTCTTTCCCCTGCTGCTaGTTTATAAATATAGGCATA +
Preference number: 4 (lower is better)
Translates to: RYLLPWNPQRNLGKLDWNSFPCC*FINIGI
Trigger: TATGCCTATATTTATAAACCAGCAGCAGGGGAAAGA...ATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR TCA 90 bp ACCTGCATCTTTAATACAGTGAGATTTGTATGCATACACTCTGGTGTCTTCATTATTTCTTCATTAAGTTaGACATCCTGTCTGCCAACT +
Preference number: 4 (lower is better)
Translates to: TCIFNTVRFVCIHSGVFIISSLS*TSCLPT
Trigger: AGTTGGCAGACAGGATGTTCAACTTAATGAAGAAAT...AATGAAGACACCAGAGTGTATGCATACAAATCTCACTGTATTAAAGATGCAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp AGATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATATGTGGATAAAGCACTaGAGCTTAATACAGATCAAT +
Preference number: 4 (lower is better)
Translates to: RYLLPWNPQRNLGKLDWNMWIKH*SLIQIN
Trigger: ATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT...ATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp ACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTATGTGGATAAAGCACTaGAGCTTAATACAGATCAAT +
Preference number: 4 (lower is better)
Translates to: TMWIKHWSLIQINIWPQVMWIKH*SLIQIN
Trigger: ATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT...AACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CCA 90 bp TTAGGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCATGTGGATAAAGCACTaGAGCTTAATACAGATCAAT +
Preference number: 4 (lower is better)
Translates to: LGYNVDKALELNTDQYLAMWIKH*SLIQIN
Trigger: ATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT...GGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CCA 90 bp ATACACACAAGCACATATCATAGCTCAACCTCATCTAAACATCTAGAGTCTGGAGTTAGCCCCGATGTTTaGAATGAAATTAACAAGATT +
Preference number: 4 (lower is better)
Translates to: IHTSTYHSSTSSKHLESGVSPDV*NEINKI
Trigger: AATCTTGTTAATTTCATTCCAAACATCGGGGCTAAC...TCCAGACTCTAGATGTTTAGATGAGGTTGAGCTATGATATGTGCTTGTGTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CCA 90 bp ACCTGCATCTTTAATACAGTGAGATTTGTATGCATACACTCTGGTGTCTTCATTGCATGTAATTTATACTaGAGCAACGAATGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: TCIFNTVRFVCIHSGVFIACNLY*SNECSV
Trigger: TACACTGCATTCGTTGCTCCAGTATAAATTACATGC...AATGAAGACACCAGAGTGTATGCATACAAATCTCACTGTATTAAAGATGCAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp GTCTGCCAACTCCATACCAACCCAGCTGCTAATAAGCATGCCCTGAGCACCCAGCCCGAGGTAAAACTGTaGGGAGGAGGAAACTGCCAA +
Preference number: 5 (lower is better)
Translates to: VCQLHTNPAANKHALSTQPEVKL*GGGNCQ
Trigger: TTGGCAGTTTCCTCCTCCCAACAGTTTTACCTCGGG...CTGGGTGCTCAGGGCATGCTTATTAGCAGCTGGGTTGGTATGGAGTTGGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS CCA 90 bp AAGCCGGCAGACCTGCAAGCCCTTTGCACATCTTATTTAACAGCTTaGAATTCGCAAGCAGGAAAGAAATGCGGCAGGAGGAGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: KPADLQALCTSYLTA*NSQAGKKCGRRSCG
Trigger: GCCACAGCTCCTCCTGCCGCATTTCTTTCCTGCTTGCGAATTCCAAGCTGTTAAATAAGATGTGCAAAGGGCTTGCAGGTCTGCCGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000491263.1
ENST00000527393.5
ENST00000531057.5
CDS-3UTR CAA 90 bp CAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCTGTATTTCTTCAGCTGTGGCTTCGGCTTaGAGCGTACTTTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: QPVTYGRCCWQGLSCISSAVASA*SVLCLF
Trigger: GAAGAGGCAAAGTACGCTCAAAGCCGAAGCCACAGC...TGAAGAAATACAGCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TATGCCCTCACTCAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCGATTCAGCCCATTTCTaGACTTCCTCTTGGCTCACT +
Preference number: 5 (lower is better)
Translates to: YALTQPVTYGRCCWQGLSDSAHF*TSSWLT
Trigger: AGTGAGCCAAGAGGAAGTCAAGAAATGGGCTGAATC...GCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTGAGTGAGGGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TATGCCCTCACTCAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCGACTTCAAGAAAGCTTaGAAAGCTGCCAGCCCACAT +
Preference number: 5 (lower is better)
Translates to: YALTQPVTYGRCCWQGLSDFKKA*KAASPH
Trigger: ATGTGGGCTGGCAGCTTTCAAAGCTTTCTTGAAGTC...GCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTGAGTGAGGGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS TCA 90 bp GCAAGCAGGAAAGAAATGCGGCAGGAGGAGCTGTGGCTTCGGCTTTaGGCGTACTTTGCCTCTTCTCCGGTAAAGATATTGTCAGAATCC +
Preference number: 5 (lower is better)
Translates to: ASRKEMRQEELWLRL*AYFASSPVKILSES
Trigger: GGATTCTGACAATATCTTTACCGGAGAAGAGGCAAAGTACGCTCAAAGCCGAAGCCACAGCTCCTCCTGCCGCATTTCTTTCCTGCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000491263.1
ENST00000527393.5
ENST00000531057.5
CDS GCA 90 bp GGGAGCTGGCAGGATCATCGTCTCCACGCAGTGATTTGCGGAAGTTaGCTTGGTTGTTATGCAAACAAGAAGGTGGAGAGAAATAGCTGG +
Preference number: 5 (lower is better)
Translates to: GSWQDHRLHAVICGS*LGCYANKKVERNSW
Trigger: CCAGCTATTTCTCTCCACCTTCTTGTTTGCATAACAACCAAGGCAACTTCCGCAAATCACTGCGTGGAGACGATGATCCTGCCAGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS TCA 90 bp CACGATTTCCAAAAGGGAGCTGGCAGGATCATCGTCTCCACGCAGTaGTTTGCGGAAGTTGCCTTGGTTGTTATGCAAACAAGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: HDFQKGAGRIIVSTQ*FAEVALVVMQTRRW
Trigger: CCACCTTCTTGTTTGCATAACAACCAAGGCAACTTCCGCAAATCACTGCGTGGAGACGATGATCCTGCCAGCTCCCTTTTGGAAATCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAGCTGTGGCTTCGGCTTaGAGCGTACTTTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGAVASA*SVLCLF
Trigger: GAAGAGGCAAAGTACGCTCAAAGCCGAAGCCACAGC...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000531057.5
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGACTAGCATGTTCCGGCTaGTCTCTTCCCTGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGLACSG*SLPWCK
Trigger: CTTGCACCAGGGAAGAGACAAGCCGGAACATGCTAG...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp AATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATCTAGCATGTTCCGGCTaGTCTCTTCCCTGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: NWTGMGSHPDEHSNTKSYLACSG*SLPWCK
Trigger: CTTGCACCAGGGAAGAGACAAGCCGGAACATGCTAG...ATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp GTGCTCATGCATGTAATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCGCCCGAGGTAAAACTGTaGGGAGGAGGAAACTGCCAA +
Preference number: 5 (lower is better)
Translates to: VLMHVIYTGATNAVYVDAPEVKL*GGGNCQ
Trigger: TTGGCAGTTTCCTCCTCCCAACAGTTTTACCTCGGG...CGCGTCCACATACACTGCATTCGTTGCTCCAGTATAAATTACATGCATGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp GTAAGTACATACACATACTCTAGTTATGAGCACCTAGGGTCTTTCCCATCACTCGCTGTGGCTTCGGCTTaGAGCGTACTTTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VSTYTYSSYEHLGSFPSLAVASA*SVLCLF
Trigger: GAAGAGGCAAAGTACGCTCAAAGCCGAAGCCACAGC...GAGTGATGGGAAAGACCCTAGGTGCTCATAACTAGAGTATGTGTATGTACTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp CAGCCAGTAACTTACGGCAGGTGTTGCTGGCAAGGCCTTAGCTGTATTTCTTCAAGACCTGCAAGCCCTTaGCACATCTTATTTAACAGC +
Preference number: 5 (lower is better)
Translates to: QPVTYGRCCWQGLSCISSRPASP*HILFNS
Trigger: GCTGTTAAATAAGATGTGCAAAGGGCTTGCAGGTCT...TGAAGAAATACAGCTAAGGCCTTGCCAGCAACACCTGCCGTAAGTTACTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCTGCCTTCATTTCTTGACTTCCTCTaGGCTCACTCTCTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: WPQVFQSIESWHFIPLPSFLDFL*AHSLAN
Trigger: ATTTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAAA...TGAAGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp CAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCTAGCATGTTCCGGCTaGTCTCTTCCCTGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: QINIWPQVFQSIESWHFILACSG*SLPWCK
Trigger: CTTGCACCAGGGAAGAGACAAGCCGGAACATGCTAG...GATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp CTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCATCCTTCTCCATCAGGTaGAAAATCTTCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LRKIGLEWGPTLMNTQTPSFSIR*KIFFWA
Trigger: GGCCCAGAAGAAGATTTTCAACCTGATGGAGAAGGA...TGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp CCAGACCTACCAGGCCATTATTTAGATATTTGCTCCCATGGAACCCTCAAAGAACCCGAGGTAAAACTGTaGGGAGGAGGAAACTGCCAA +
Preference number: 5 (lower is better)
Translates to: PDLPGHYLDICSHGTLKEPEVKL*GGGNCQ
Trigger: TTGGCAGTTTCCTCCTCCCAACAGTTTTACCTCGGG...TTCTTTGAGGGTTCCATGGGAGCAAATATCTAAATAATGGCCTGGTAGGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp CCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCAGGGAGCTAAGGTATTaGCTCCTTAGAATAGTGCTC +
Preference number: 5 (lower is better)
Translates to: PWNPQRNLGKLDWNGVPPRELRY*LLRIVL
Trigger: GAGCACTATTCTAAGGAGCAAATACCTTAGCTCCCT...GGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATATCCTGGAAGCATTAGCTTaGAGGCCTATCAAGCACATG +
Preference number: 5 (lower is better)
Translates to: WTGMGSHPDEHSNTKSYILEALA*RPIKHM
Trigger: CATGTGCTTGATAGGCCTCAAAGCTAATGCTTCCAG...GATATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS TCA 90 bp TTTGAAAGCTGCCAGCCCACATTCATGACTAATCAGGTTTTCCAGTaGTTCAGCCCATTTCTTGACTTCCTCTTGGCTCACTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: FESCQPTFMTNQVFQ*FSPFLDFLLAHSLA
Trigger: TGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAAATGGGCTGAATCACTGGAAAACCTGATTAGTCATGAATGTGGGCTGGCAGCTTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527393.5
ENST00000527809.5
ENST00000528938.1
ENST00000531057.5
ENST00000533019.1
CDS-3UTR CAA 90 bp TTTCTGCTTTTCTGCCCCACAGCTGGACGGGTTGACCAAATCAAGATAGAATCGTCTCCGGTAAAGATATaGTCAGAATCCTCTGAGCGT +
Preference number: 5 (lower is better)
Translates to: FLLFCPTAGRVDQIKIESSPVKI*SESSER
Trigger: ACGCTCAGAGGATTCTGACAATATCTTTACCGGAGA...CGATTCTATCTTGATTTGGTCAACCCGTCCAGCTGTGGGGCAGAAAAGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367908.8
CDS-3UTR CAA 90 bp ACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATGCTGTGGCTTCGGCTTaGAGCGTACTTTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: TDQYLASGFPEHRVLAFHAVASA*SVLCLF
Trigger: GAAGAGGCAAAGTACGCTCAAAGCCGAAGCCACAGC...ATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCTGCCTTCATGGCAAATAACCACTTaGTCCTTCTTGTTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: WPQVFQSIESWHFIPLPSWQITT*SFLLWE
Trigger: TTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCA...TGAAGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAGATTCAGCCCATTTCTaGACTTCCTCTTGGCTCACT +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGDSAHF*TSSWLT
Trigger: AGTGAGCCAAGAGGAAGTCAAGAAATGGGCTGAATC...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAGACTTCAAGAAAGCTTaGAAAGCTGCCAGCCCACAT +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGDFKKA*KAASPH
Trigger: ATGTGGGCTGGCAGCTTTCAAAGCTTTCTTGAAGTC...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR CAA 90 bp TGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCCAGAAAGGTGCTCCCAGAGCATAGAGTCTaGGCATTTCATCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: WCLHFAAHYIGLKARKVLPEHRV*AFHPSA
Trigger: GGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGG...GAGCACCTTTCTGGCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS TCA 90 bp GTGCAAGAATCCAGGTTCACATTCATGACTAATCAGGTTTTCCAGTaGTTCAGCCCATTTCTTGACTTCCTCTTGGCTCACTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: VQESRFTFMTNQVFQ*FSPFLDFLLAHSLA
Trigger: TGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAAATGGGCTGAATCACTGGAAAACCTGATTAGTCATGAATGTGAACCTGGATTCTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367908.8
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGATCTCCGGTAAAGATATaGTCAGAATCCTCTGAGCGT +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGSPVKI*SESSER
Trigger: ACGCTCAGAGGATTCTGACAATATCTTTACCGGAGA...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAAGACCTGCAAGCCCTTaGCACATCTTATTTAACAGC +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGRPASP*HILFNS
Trigger: GCTGTTAAATAAGATGTGCAAAGGGCTTGCAGGTCT...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000531057.5
CDS-3UTR CAA 90 bp TGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCTGCCTTCATTGTTGTGGGAAGAATaGTGTTCACAGGAATCAGAT +
Preference number: 5 (lower is better)
Translates to: WPQVFQSIESWHFIPLPSLLWEE*CSQESD
Trigger: ATCTGATTCCTGTGAACACAATTCTTCCCACAACAA...TGAAGGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp CTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCATGGCAAATAACCACTTaGTCCTTCTTGTTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LRKIGLEWGPTLMNTQTPWQITT*SFLLWE
Trigger: TTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCA...TGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp ACACTGATGAGGAACTCCAGGGATATTAAGGGCAAGATTGCCAGAGAGACAAGATTTCTTGACTTCCTCTaGGCTCACTCTCTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: TLMRNSRDIKGKIARETRFLDFL*AHSLAN
Trigger: ATTTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAAA...TCTTGTCTCTCTGGCAATCTTGCCCTTAATATCCCTGGAGTTCCTCATCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGATTTCTTGACTTCCTCTaGGCTCACTCTCTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGFLDFL*AHSLAN
Trigger: ATTTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAAA...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR CAA 90 bp AAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAGATTCAGCCCATTTCTaGACTTCCTCTTGGCTCACT +
Preference number: 5 (lower is better)
Translates to: KKLRKIGLEWGPTLMNTQDSAHF*TSSWLT
Trigger: AGTGAGCCAAGAGGAAGTCAAGAAATGGGCTGAATC...TTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TATTTGCTCCTTAGAATAGTGCTCAAGGTGGAGGCTGTCAGTGGTCAAATCAAGGATTCAGCCCATTTCTaGACTTCCTCTTGGCTCACT +
Preference number: 5 (lower is better)
Translates to: YLLLRIVLKVEAVSGQIKDSAHF*TSSWLT
Trigger: AGTGAGCCAAGAGGAAGTCAAGAAATGGGCTGAATC...CTTGATTTGACCACTGACAGCCTCCACCTTGAGCACTATTCTAAGGAGCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp AAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAATCCTTCTCCATCAGGTaGAAAATCTTCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: KKLRKIGLEWGPTLMNTQSFSIR*KIFFWA
Trigger: GGCCCAGAAGAAGATTTTCAACCTGATGGAGAAGGA...TTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TTAGTCTCAGAGCCTAAAAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTTCCTTCTCCATCAGGTaGAAAATCTTCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LVSEPKKKCLQSLLAPMFSFSIR*KIFFWA
Trigger: GGCCCAGAAGAAGATTTTCAACCTGATGGAGAAGGA...AAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTTTTAGGCTCTGAGACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp CCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCCCATTATTTAGATATTaGCTCCCATGGAACCCTCAA +
Preference number: 5 (lower is better)
Translates to: PWNPQRNLGKLDWNGVPPPLFRY*LPWNPQ
Trigger: TTGAGGGTTCCATGGGAGCAAATATCTAAATAATGG...GGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp GGAACTCCAGGGATATTAAGGGCAAGATTGCCAGAGAGACAAGAAGGGTACAATTCTTTCCCATCACTCTaGCAAAAGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: GTPGILRARLPERQEGYNSFPSL*QKCVCV
Trigger: CACACACACACACTTTTGCAAGAGTGATGGGAAAGA...ATTGTACCCTTCTTGTCTCTCTGGCAATCTTGCCCTTAATATCCCTGGAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp GTGCTCATGCATGTAATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCGTCTTTCCCATCACTCTaGCAAAAGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VLMHVIYTGATNAVYVDASFPSL*QKCVCV
Trigger: CACACACACACACTTTTGCAAGAGTGATGGGAAAGA...CGCGTCCACATACACTGCATTCGTTGCTCCAGTATAAATTACATGCATGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp AATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATAGGGAGCTAAGGTATTaGCTCCTTAGAATAGTGCTC +
Preference number: 5 (lower is better)
Translates to: NWTGMGSHPDEHSNTKSYRELRY*LLRIVL
Trigger: GAGCACTATTCTAAGGAGCAAATACCTTAGCTCCCT...ATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp GTGCTCATGCATGTAATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCGAGGGAGCTAAGGTATTaGCTCCTTAGAATAGTGCTC +
Preference number: 5 (lower is better)
Translates to: VLMHVIYTGATNAVYVDARELRY*LLRIVL
Trigger: GAGCACTATTCTAAGGAGCAAATACCTTAGCTCCCT...CGCGTCCACATACACTGCATTCGTTGCTCCAGTATAAATTACATGCATGAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGACGGAAGTTGCCTTGGTaGTTATGCAAACAAGAAGGT +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGRKLPW*LCKQEG
Trigger: ACCTTCTTGTTTGCATAACAACCAAGGCAACTTCCG...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR CAA 90 bp TGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATATCTTTGCGGAAGTTGCCTaGGTTGTTATGCAAACAAGA +
Preference number: 5 (lower is better)
Translates to: WTGMGSHPDEHSNTKSYIFAEVA*VVMQTR
Trigger: TCTTGTTTGCATAACAACCAAGGCAACTTCCGCAAA...GATATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR CAA 90 bp ACTAACCAACCATCCCGAGGTAAAACTGTTGGGAGGAGGAAACTGCCAACAATCAGTGATTTGCGGAAGTaGCCTTGGTTGTTATGCAAA +
Preference number: 5 (lower is better)
Translates to: TNQPSRGKTVGRRKLPTISDLRK*PWLLCK
Trigger: TTTGCATAACAACCAAGGCAACTTCCGCAAATCACT...GATTGTTGGCAGTTTCCTCCTCCCAACAGTTTTACCTCGGGATGGTTGGTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR CAA 90 bp TGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTCTCCACGCAGTGATTaGCGGAAGTTGCCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: WSLIQINIWPQVFQSIESSPRSD*RKLPWL
Trigger: CAACCAAGGCAACTTCCGCAAATCACTGCGTGGAGA...AGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS-3UTR CAA 90 bp CCAGACCTACCAGGCCATTATTTAGATATTTGCTCCCATGGAACCCTCAAAGAAAGACCTGCAAGCCCTTaGCACATCTTATTTAACAGC +
Preference number: 5 (lower is better)
Translates to: PDLPGHYLDICSHGTLKERPASP*HILFNS
Trigger: GCTGTTAAATAAGATGTGCAAAGGGCTTGCAGGTCT...TTCTTTGAGGGTTCCATGGGAGCAAATATCTAAATAATGGCCTGGTAGGTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATATCGATGTTTCATATCTTTaGCACTCCTCAAGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: WTGMGSHPDEHSNTKSYIDVSYL*HSSSKK
Trigger: CTTCTTGCTTGAGGAGTGCAAAAGATATGAAACATC...GATATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATATCTTGTTGTGGGAAGAATaGTGTTCACAGGAATCAGAT +
Preference number: 5 (lower is better)
Translates to: WTGMGSHPDEHSNTKSYILLWEE*CSQESD
Trigger: ATCTGATTCCTGTGAACACAATTCTTCCCACAACAA...GATATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAACCACTTTGTCCTTCTaGTTGTGGGAAGAATTGTGT +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGTTLSF*LWEELC
Trigger: ACACAATTCTTCCCACAACAAGAAGGACAAAGTGGT...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR CAA 90 bp AGTGGTCAAATCAAGCATGAAGTTCCTTGGATGCTTCTCCAGCAAGATCCATGGTGGCAAATAACCACTTaGTCCTTCTTGTTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: SGQIKHEVPWMLLQQDPWWQITT*SFLLWE
Trigger: TTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCA...CCATGGATCTTGCTGGAGAAGCATCCAAGGAACTTCATGCTTGATTTGACCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGATGGCAAATAACCACTTaGTCCTTCTTGTTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGWQITT*SFLLWE
Trigger: TTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCA...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR CAA 90 bp TTTTACAAAACCAACTTTCCACAGGTTAGCATTTCTTTCTTAGCCTACATGGCACTAGCATGTTCCGGCTaGTCTCTTCCCTGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: FYKTNFPQVSISFLAYMALACSG*SLPWCK
Trigger: CTTGCACCAGGGAAGAGACAAGCCGGAACATGCTAG...TGCCATGTAGGCTAAGAAAGAAATGCTAACCTGTGGAAAGTTGGTTTTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp AATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCTAGCATGTTCCGGCTaGTCTCTTCCCTGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: NVDKALELNTDQYLASGFLACSG*SLPWCK
Trigger: CTTGCACCAGGGAAGAGACAAGCCGGAACATGCTAG...AAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp ACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTCCAGAGCATAGAGTCTaGGCATTTCATCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: TMWIKHWSLIQINIWPQVPEHRV*AFHPSA
Trigger: GGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGG...AACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp ATACACACAAGCACATATCATAGCTCAACCTCATCTAAACATCTAGAGTCTGGACCAGAGCATAGAGTCTaGGCATTTCATCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: IHTSTYHSSTSSKHLESGPEHRV*AFHPSA
Trigger: GGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGG...TCCAGACTCTAGATGTTTAGATGAGGTTGAGCTATGATATGTGCTTGTGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp AGATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATCCAGAGCATAGAGTCTaGGCATTTCATCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RYLLPWNPQRNLGKLDWNPEHRV*AFHPSA
Trigger: GGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGG...ATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp ATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCCAGAGCATAGAGTCTaGGCATTTCATCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: MWIKHWSLIQINIWPQVFPEHRV*AFHPSA
Trigger: GGCAGAGGGATGAAATGCCAAGACTCTATGCTCTGG...GAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp GAACGTGCTGGCCAACAGAATACATGTGCATGTGGATGTCATGTGACATGCACTAATACAGATCAATATTaGGCCTCAGGTTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: ERAGQQNTCACGCHVTCTNTDQY*ASGFPE
Trigger: CTCTGGAAAACCTGAGGCCAAATATTGATCTGTATT...AGTGCATGTCACATGACATCCACATGCACATGTATTCTGTTGGCCAGCACGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp ACTAACCAACCATCCCGAGGTAAAACTGTTGGGAGGAGGAAACTGCCAACAATCCCATTATTTAGATATTaGCTCCCATGGAACCCTCAA +
Preference number: 5 (lower is better)
Translates to: TNQPSRGKTVGRRKLPTIPLFRY*LPWNPQ
Trigger: TTGAGGGTTCCATGGGAGCAAATATCTAAATAATGG...GATTGTTGGCAGTTTCCTCCTCCCAACAGTTTTACCTCGGGATGGTTGGTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp AATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACACCAAAAGCTATAACTGCCAACAATCTTaGAAAATCCAGACCTACCAG +
Preference number: 5 (lower is better)
Translates to: NWTGMGSHPDEHSNTKSYNCQQS*KIQTYQ
Trigger: CTGGTAGGTCTGGATTTTCAAAGATTGTTGGCAGTT...ATAGCTTTTGGTGTTTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp CTGGAAGCATTAGCTTTGAGGCCTATCAAGCACATGATAGAAACAGGCATGCAAGCGTGTGTGTGCACTTaGAAAGGCAGTAGTTTTAGA +
Preference number: 5 (lower is better)
Translates to: LEALALRPIKHMIETGMQACVCT*KGSSFR
Trigger: TCTAAAACTACTGCCTTTCAAAGTGCACACACACGC...TTGCATGCCTGTTTCTATCATGTGCTTGATAGGCCTCAAAGCTAATGCTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp GGTGCTCATGCATGTAATTTATACTGGAGCAACGAATGCAGTGTATGTGGACGCTCTGGTGTCTTCATTTaGCAGCCCATTATATTGGCT +
Preference number: 5 (lower is better)
Translates to: GAHACNLYWSNECSVCGRSGVFI*QPIILA
Trigger: AGCCAATATAATGGGCTGCAAAATGAAGACACCAGA...GCGTCCACATACACTGCATTCGTTGCTCCAGTATAAATTACATGCATGAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS TCA 90 bp TCCTCTTTTGGATTAGAAGCATCATATTATACATGGTCCAAGATCTaGTCCTCACGATTTCCAAAAGGGAGCTGGCAGGATCATCGTCTC +
Preference number: 5 (lower is better)
Translates to: SSFGLEASYYTWSKI*SSRFPKGSWQDHRL
Trigger: GAGACGATGATCCTGCCAGCTCCCTTTTGGAAATCGTGAGGATCAGATCTTGGACCATGTATAATATGATGCTTCTAATCCAAAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS TCA 90 bp TTTGAAAGCTGCCAGCCCACATTCATGACTAATCAGGTTTTCCAGTaGTTCAGCCCATTTCTTGACTTCCTCTTGGCTCACTCTAGAAAA +
Preference number: 5 (lower is better)
Translates to: FESCQPTFMTNQVFQ*FSPFLDFLLAHSRK
Trigger: TTTTCTAGAGTGAGCCAAGAGGAAGTCAAGAAATGGGCTGAATCACTGGAAAACCTGATTAGTCATGAATGTGGGCTGGCAGCTTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491263.1
CDS GCA 90 bp AGCTCCACTATTCTAGGAACCTTCACTAAGATCCAGAGAGTTCTCTaGCATAAAAGCTTACCTTTTTGGTCAGGTTGGCTAATGGGTAGA +
Preference number: 5 (lower is better)
Translates to: SSTILGTFTKIQRVL*HKSLPFWSGWLMGR
Trigger: TCTACCCATTAGCCAACCTGACCAAAAAGGTAAGCTTTTATGGCAGAGAACTCTCTGGATCTTAGTGAAGGTTCCTAGAATAGTGGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491263.1
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAGATGTTTCATATCTTTaGCACTCCTCAAGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGDVSYL*HSSSKK
Trigger: CTTCTTGCTTGAGGAGTGCAAAAGATATGAAACATC...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000531057.5
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGATTGTTGTGGGAAGAATaGTGTTCACAGGAATCAGAT +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGLLWEE*CSQESD
Trigger: ATCTGATTCCTGTGAACACAATTCTTCCCACAACAA...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR CAA 90 bp AAGAAACTTAGGAAAATTGGACTGGAATGGGGTCCCACCCTGATGAACACTCAAACCACTTTGTCCTTCTaGTTGTGGGAAGAATTGTGT +
Preference number: 5 (lower is better)
Translates to: KKLRKIGLEWGPTLMNTQTTLSF*LWEELC
Trigger: ACACAATTCTTCCCACAACAAGAAGGACAAAGTGGT...TTGAGTGTTCATCAGGGTGGGACCCCATTCCAGTCCAATTTTCCTAAGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCGATTCAGCCCATTTCTaGACTTCCTCTTGGCTCACT +
Preference number: 5 (lower is better)
Translates to: IQINIWPQVFQSIESWHFDSAHF*TSSWLT
Trigger: AGTGAGCCAAGAGGAAGTCAAGAAATGGGCTGAATC...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp GCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGACTTCAAGAAAGCTTaGAAAGCTGCCAGCCCACAT +
Preference number: 5 (lower is better)
Translates to: ATMWIKHWSLIQINIWPQDFKKA*KAASPH
Trigger: ATGTGGGCTGGCAGCTTTCAAAGCTTTCTTGAAGTC...CTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCGACTTCAAGAAAGCTTaGAAAGCTGCCAGCCCACAT +
Preference number: 5 (lower is better)
Translates to: IQINIWPQVFQSIESWHFDFKKA*KAASPH
Trigger: ATGTGGGCTGGCAGCTTTCAAAGCTTTCTTGAAGTC...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAGGTGATTTGATTTTCTaGTACTCTTCACAGCTGATC +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGGDLIF*YSSQLI
Trigger: GATCAGCTGTGAAGAGTACAAGAAAATCAAATCACC...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
ENST00000531057.5
CDS-3UTR CAA 90 bp GGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCATCCTTCTCCATCAGGTaGAAAATCTTCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GYNVDKALELNTDQYLASSFSIR*KIFFWA
Trigger: GGCCCAGAAGAAGATTTTCAACCTGATGGAGAAGGA...TGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp GTTGACCAAATCAAGATAGAATCGAGACTTGAGGAAGCGGCGGTAGGAATCCTTCCATTATTTAGATATTaGCTCCCATGGAACCCTCAA +
Preference number: 5 (lower is better)
Translates to: VDQIKIESRLEEAAVGILPLFRY*LPWNPQ
Trigger: TTGAGGGTTCCATGGGAGCAAATATCTAAATAATGG...AAGGATTCCTACCGCCGCTTCCTCAAGTCTCGATTCTATCTTGATTTGGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367908.8
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAACCAACCGAATATCTTaGGTATCTTCAACAGAACCT +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGTNRIS*VSSTEP
Trigger: AGGTTCTGTTGAAGATACCAAAGATATTCGGTTGGT...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367906.7
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGATATATGCCCGTCATTTaGACCAACCGAATATCTTTG +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGYMPVI*TNRISL
Trigger: CAAAGATATTCGGTTGGTCAAAATGACGGGCATATA...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367906.7
CDS-3UTR CAA 90 bp AATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCTGGATGTTTCATATCTTTaGCATTTGCCTCTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: NIWPQVFQSIESWHFIPLDVSYL*HLPLLR
Trigger: CCGGAGAAGAGGCAAATGCAAAAGATATGAAACATC...CAGAGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527809.5
CDS-3UTR CAA 90 bp CGTAGAAGTGACTCACACATGGCAGGCAGCATGAATATTAGGCTACAATGTGGAGATCAATATTTGGCCTaGGGACTTAGTTTAGATGGT +
Preference number: 5 (lower is better)
Translates to: RRSDSHMAGSMNIRLQCGDQYLA*GLSLDG
Trigger: ACCATCTAAACTAAGTCCCAAGGCCAAATATTGATC...TCCACATTGTAGCCTAATATTCATGCTGCCTGCCATGTGTGAGTCACTTCTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531057.5
CDS-3UTR CAA 90 bp ACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATTCTCCGGTAAAGATATaGTCAGAATCCTCTGAGCGT +
Preference number: 5 (lower is better)
Translates to: TDQYLASGFPEHRVLAFHSPVKI*SESSER
Trigger: ACGCTCAGAGGATTCTGACAATATCTTTACCGGAGA...ATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp ACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATAGACCTGCAAGCCCTTaGCACATCTTATTTAACAGC +
Preference number: 5 (lower is better)
Translates to: TDQYLASGFPEHRVLAFHRPASP*HILFNS
Trigger: GCTGTTAAATAAGATGTGCAAAGGGCTTGCAGGTCT...ATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp CCAGACCTACCAGGCCATTATTTAGATATTTGCTCCCATGGAACCCTCAAAGAAGATGTTTCATATCTTTaGCACTCCTCAAGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: PDLPGHYLDICSHGTLKEDVSYL*HSSSKK
Trigger: CTTCTTGCTTGAGGAGTGCAAAAGATATGAAACATC...TTCTTTGAGGGTTCCATGGGAGCAAATATCTAAATAATGGCCTGGTAGGTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp CAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCACCACTTTGTCCTTCTaGTTGTGGGAAGAATTGTGT +
Preference number: 5 (lower is better)
Translates to: QINIWPQVFQSIESWHFITTLSF*LWEELC
Trigger: ACACAATTCTTCCCACAACAAGAAGGACAAAGTGGT...GATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp ATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTACCACTTTGTCCTTCTaGTTGTGGGAAGAATTGTGT +
Preference number: 5 (lower is better)
Translates to: INIWPQVFQSIESWHFIPTTLSF*LWEELC
Trigger: ACACAATTCTTCCCACAACAAGAAGGACAAAGTGGT...AGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp GTAAGTACATACACATACTCTAGTTATGAGCACCTAGGGTCTTTCCCATCACTCACCACTTTGTCCTTCTaGTTGTGGGAAGAATTGTGT +
Preference number: 5 (lower is better)
Translates to: VSTYTYSSYEHLGSFPSLTTLSF*LWEELC
Trigger: ACACAATTCTTCCCACAACAAGAAGGACAAAGTGGT...GAGTGATGGGAAAGACCCTAGGTGCTCATAACTAGAGTATGTGTATGTACTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp ACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATTTTCTTGACTTCCTCTaGGCTCACTCTCTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: TDQYLASGFPEHRVLAFHFLDFL*AHSLAN
Trigger: ATTTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAAA...ATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCTTTCTTGACTTCCTCTaGGCTCACTCTCTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: IQINIWPQVFQSIESWHFFLDFL*AHSLAN
Trigger: ATTTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAAA...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp ACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTCCTTCTCCATCAGGTaGAAAATCTTCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: TMWIKHWSLIQINIWPQVSFSIR*KIFFWA
Trigger: GGCCCAGAAGAAGATTTTCAACCTGATGGAGAAGGA...AACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp AATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTCTGAATACAGATCAATATTaGGCCTCAGGTTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: NIWPQVFQSIESWHFIPLNTDQY*ASGFPE
Trigger: CTCTGGAAAACCTGAGGCCAAATATTGATCTGTATT...CAGAGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp AAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTGGAATGAAATTAACAAGGCGTGTGTGTGCACTTaGAAAGGCAGTAGTTTTAGA +
Preference number: 5 (lower is better)
Translates to: KEMPPVSVSPDVWNEINKACVCT*KGSSFR
Trigger: TCTAAAACTACTGCCTTTCAAAGTGCACACACACGC...CTTGTTAATTTCATTCCAAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp ATACACACAAGCACATATCATAGCTCAACCTCATCTAAACATCTAGAGTCTGGACTGGAAGCATTAGCTTaGAGGCCTATCAAGCACATG +
Preference number: 5 (lower is better)
Translates to: IHTSTYHSSTSSKHLESGLEALA*RPIKHM
Trigger: CATGTGCTTGATAGGCCTCAAAGCTAATGCTTCCAG...TCCAGACTCTAGATGTTTAGATGAGGTTGAGCTATGATATGTGCTTGTGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TATGCATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCTCTCCGGTAAAGATATaGTCAGAATCCTCTGAGCGT +
Preference number: 5 (lower is better)
Translates to: YAYTLVSSFCSPLYWLKSSPVKI*SESSER
Trigger: ACGCTCAGAGGATTCTGACAATATCTTTACCGGAGA...GCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TTAGGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCTCCGGTAAAGATATaGTCAGAATCCTCTGAGCGT +
Preference number: 5 (lower is better)
Translates to: LGYNVDKALELNTDQYLASPVKI*SESSER
Trigger: ACGCTCAGAGGATTCTGACAATATCTTTACCGGAGA...GGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp GTAAGTACATACACATACTCTAGTTATGAGCACCTAGGGTCTTTCCCATCACTCGATGTTTCATATCTTTaGCACTCCTCAAGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: VSTYTYSSYEHLGSFPSLDVSYL*HSSSKK
Trigger: CTTCTTGCTTGAGGAGTGCAAAAGATATGAAACATC...GAGTGATGGGAAAGACCCTAGGTGCTCATAACTAGAGTATGTGTATGTACTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp ATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATCCCTTTGTTGTGGGAAGAATaGTGTTCACAGGAATCAGAT +
Preference number: 5 (lower is better)
Translates to: INIWPQVFQSIESWHFIPLLWEE*CSQESD
Trigger: ATCTGATTCCTGTGAACACAATTCTTCCCACAACAA...AGGGATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp GCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGACCACTTTGTCCTTCTaGTTGTGGGAAGAATTGTGT +
Preference number: 5 (lower is better)
Translates to: ATMWIKHWSLIQINIWPQTTLSF*LWEELC
Trigger: ACACAATTCTTCCCACAACAAGAAGGACAAAGTGGT...CTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp GCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGTGGCAAATAACCACTTaGTCCTTCTTGTTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: ATMWIKHWSLIQINIWPQWQITT*SFLLWE
Trigger: TTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCA...CTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp TATGCATACACTCTGGTGTCTTCATTTTGCAGCCCATTATATTGGCTTAAAAGCTTTCTTGACTTCCTCTaGGCTCACTCTCTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: YAYTLVSSFCSPLYWLKSFLDFL*AHSLAN
Trigger: ATTTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAAA...GCTTTTAAGCCAATATAATGGGCTGCAAAATGAAGACACCAGAGTGTATGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp AATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTGACTTCAAGAAAGCTTaGAAAGCTGCCAGCCCACAT +
Preference number: 5 (lower is better)
Translates to: NVDKALELNTDQYLASGFDFKKA*KAASPH
Trigger: ATGTGGGCTGGCAGCTTTCAAAGCTTTCTTGAAGTC...AAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp ACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCATAACTGCCAACAATCTTaGAAAATCCAGACCTACCAG +
Preference number: 5 (lower is better)
Translates to: TDQYLASGFPEHRVLAFHNCQQS*KIQTYQ
Trigger: CTGGTAGGTCTGGATTTTCAAAGATTGTTGGCAGTT...ATGAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTAACTGCCAACAATCTTaGAAAATCCAGACCTACCAG +
Preference number: 5 (lower is better)
Translates to: WSLIQINIWPQVFQSIESNCQQS*KIQTYQ
Trigger: CTGGTAGGTCTGGATTTTCAAAGATTGTTGGCAGTT...AGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TTAGGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCTTTCCCATCACTCTaGCAAAAGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: LGYNVDKALELNTDQYLASFPSL*QKCVCV
Trigger: CACACACACACACTTTTGCAAGAGTGATGGGAAAGA...GGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp TTAGGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCGCGTGTGTGTGCACTTaGAAAGGCAGTAGTTTTAGA +
Preference number: 5 (lower is better)
Translates to: LGYNVDKALELNTDQYLAACVCT*KGSSFR
Trigger: TCTAAAACTACTGCCTTTCAAAGTGCACACACACGC...GGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCTCTGGTGTCTTCATTTaGCAGCCCATTATATTGGCT +
Preference number: 5 (lower is better)
Translates to: IQINIWPQVFQSIESWHFSGVFI*QPIILA
Trigger: AGCCAATATAATGGGCTGCAAAATGAAGACACCAGA...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCTTGTTGTGGGAAGAATaGTGTTCACAGGAATCAGAT +
Preference number: 5 (lower is better)
Translates to: IQINIWPQVFQSIESWHFLLWEE*CSQESD
Trigger: ATCTGATTCCTGTGAACACAATTCTTCCCACAACAA...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp TTAGGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTGGCAAATAACCACTTaGTCCTTCTTGTTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LGYNVDKALELNTDQYLAWQITT*SFLLWE
Trigger: TTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCA...GGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp ATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTTGGCATTTCGGTGATTTGATTTTCTaGTACTCTTCACAGCTGATC +
Preference number: 5 (lower is better)
Translates to: IQINIWPQVFQSIESWHFGDLIF*YSSQLI
Trigger: GATCAGCTGTGAAGAGTACAAGAAAATCAAATCACC...GAAATGCCAAGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp GGCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTGATTTGATTTTCTaGTACTCTTCACAGCTGATC +
Preference number: 5 (lower is better)
Translates to: GYNVDKALELNTDQYLASGDLIF*YSSQLI
Trigger: GATCAGCTGTGAAGAGTACAAGAAAATCAAATCACC...TGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp AAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATGGTGATTTGATTTTCTaGTACTCTTCACAGCTGATC +
Preference number: 5 (lower is better)
Translates to: KALELNTDQYLASGFPEHGDLIF*YSSQLI
Trigger: GATCAGCTGTGAAGAGTACAAGAAAATCAAATCACC...ATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp GCTACAATGTGGATAAAGCACTGGAGCTTAATACAGATCAATATTTGGCCTCAGAATACAGATCAATATTaGGCCTCAGGTTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: ATMWIKHWSLIQINIWPQNTDQY*ASGFPE
Trigger: CTCTGGAAAACCTGAGGCCAAATATTGATCTGTATT...CTGAGGCCAAATATTGATCTGTATTAAGCTCCAGTGCTTTATCCACATTGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp TGGAGCTTAATACAGATCAATATTTGGCCTCAGGTTTTCCAGAGCATAGAGTCTAATACAGATCAATATTaGGCCTCAGGTTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: WSLIQINIWPQVFQSIESNTDQY*ASGFPE
Trigger: CTCTGGAAAACCTGAGGCCAAATATTGATCTGTATT...AGACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTGTATTAAGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527809.5
CDS-3UTR CAA 90 bp GTAAGTACATACACATACTCTAGTTATGAGCACCTAGGGTCTTTCCCATCACTCTATTTCTTCATTAAGTaGAACATCCTGTCTGCCAAC +
Preference number: 5 (lower is better)
Translates to: VSTYTYSSYEHLGSFPSLYFFIK*NILSAN
Trigger: GTTGGCAGACAGGATGTTCAACTTAATGAAGAAATA...GAGTGATGGGAAAGACCCTAGGTGCTCATAACTAGAGTATGTGTATGTACTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp ATACACACAAGCACATATCATAGCTCAACCTCATCTAAACATCTAGAGTCTGGATCTGGTGTCTTCATTTaGCAGCCCATTATATTGGCT +
Preference number: 5 (lower is better)
Translates to: IHTSTYHSSTSSKHLESGSGVFI*QPIILA
Trigger: AGCCAATATAATGGGCTGCAAAATGAAGACACCAGA...TCCAGACTCTAGATGTTTAGATGAGGTTGAGCTATGATATGTGCTTGTGTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp ATATTTGCTCCCATGGAACCCTCAAAGAAACTTAGGAAAATTGGACTGGAATGGTATTTCTTCATTAAGTaGAACATCCTGTCTGCCAAC +
Preference number: 5 (lower is better)
Translates to: IFAPMEPSKKLRKIGLEWYFFIK*NILSAN
Trigger: GTTGGCAGACAGGATGTTCAACTTAATGAAGAAATA...CCATTCCAGTCCAATTTTCCTAAGTTTCTTTGAGGGTTCCATGGGAGCAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS-3UTR CAA 90 bp AAAGAAATGCCTCCAGTCTCTGTTAGCCCCGATGTTTGGAATGAAATTAACAAGTATTTCTTCATTAAGTaGAACATCCTGTCTGCCAAC +
Preference number: 5 (lower is better)
Translates to: KEMPPVSVSPDVWNEINKYFFIK*NILSAN
Trigger: GTTGGCAGACAGGATGTTCAACTTAATGAAGAAATA...CTTGTTAATTTCATTCCAAACATCGGGGCTAACAGAGACTGGAGGCATTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
CDS GCA 72 bp GCAGGAGGAGCTGTGGCTTCGGCTTTGAGCGTACTTTaGCTCTTCTCCGGTAAAGATATTGTCAGAATCCTC +
Preference number: 6 (lower is better)
Translates to: AGGAVASALSVL*LFSGKDIVRIL
Trigger: GAGGATTCTGACAATATCTTTACCGGAGAAGAGGCAAAGTACGCTCAAAGCCGAAGCCACAGCTCCTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000491263.1
ENST00000527393.5
ENST00000531057.5
CDS TCA 72 bp AAAGAAATGCGGCAGGAGGAGCTGTGGCTTCGGCTTTaGGCGTACTTTGCCTCTTCTCCGGTAAAGATATTG +
Preference number: 6 (lower is better)
Translates to: KEMRQEELWLRL*AYFASSPVKIL
Trigger: CAATATCTTTACCGGAGAAGAGGCAAAGTACGCTCAAAGCCGAAGCCACAGCTCCTCCTGCCGCATTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000491263.1
ENST00000527393.5
ENST00000531057.5
CDS CAA 72 bp CTCCTCAAGCAAGAAGCCGGCAGACCTGCAAGCCCTTaGCACATCTTATTTAACAGCTTGGAATTCGCAAGC +
Preference number: 6 (lower is better)
Translates to: LLKQEAGRPASP*HILFNSLEFAS
Trigger: GCTTGCGAATTCCAAGCTGTTAAATAAGATGTGCAAAGGGCTTGCAGGTCTGCCGGCTTCTTGCTTGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000491263.1
ENST00000527393.5
ENST00000531057.5
CDS CAA 72 bp GCAGGATCATCGTCTCCACGCAGTGATTTGCGGAAGTaGCCTTGGTTGTTATGCAAACAAGAAGGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: AGSSSPRSDLRK*PWLLCKQEGGE
Trigger: CTCTCCACCTTCTTGTTTGCATAACAACCAAGGCAACTTCCGCAAATCACTGCGTGGAGACGATGATCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS CAA 90 bp ATTTCCAAAAGGGAGCTGGCAGGATCATCGTCTCCACGCAGTGATTaGCGGAAGTTGCCTTGGTTGTTATGCAAACAAGAAGGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: ISKRELAGSSSPRSD*RKLPWLLCKQEGGE
Trigger: CTCTCCACCTTCTTGTTTGCATAACAACCAAGGCAACTTCCGCAAATCACTGCGTGGAGACGATGATCCTGCCAGCTCCCTTTTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS GCA 72 bp TCCTCAAGCAAGAAGCCGGCAGACCTGCAAGCCCTTTaGACATCTTATTTAACAGCTTGGAATTCGCAAGCA +
Preference number: 6 (lower is better)
Translates to: SSSKKPADLQAL*TSYLTAWNSQA
Trigger: TGCTTGCGAATTCCAAGCTGTTAAATAAGATGTGCAAAGGGCTTGCAGGTCTGCCGGCTTCTTGCTTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000491263.1
ENST00000527393.5
ENST00000531057.5
CDS GCA 72 bp CAGGATCATCGTCTCCACGCAGTGATTTGCGGAAGTTaGCTTGGTTGTTATGCAAACAAGAAGGTGGAGAGA +
Preference number: 6 (lower is better)
Translates to: QDHRLHAVICGS*LGCYANKKVER
Trigger: TCTCTCCACCTTCTTGTTTGCATAACAACCAAGGCAACTTCCGCAAATCACTGCGTGGAGACGATGATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421743.6
CDS CCA 72 bp GACCTGCAAGCCCTTTGCACATCTTATTTAACAGCTTaGAATTCGCAAGCAGGAAAGAAATGCGGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: DLQALCTSYLTA*NSQAGKKCGRR
Trigger: CCTCCTGCCGCATTTCTTTCCTGCTTGCGAATTCCAAGCTGTTAAATAAGATGTGCAAAGGGCTTGCAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000491263.1
ENST00000527393.5
ENST00000531057.5
CDS CAA 72 bp GGCAAAGGCCAAGGCTTCATTAGACCTATATCCCTGTaGAGGATGCAAGCCTGTATGCTTTGTAGTGACTTG +
Preference number: 6 (lower is better)
Translates to: GKGQGFIRPISL*RMQACMLCSDL
Trigger: CAAGTCACTACAAAGCATACAGGCTTGCATCCTCAACAGGGATATAGGTCTAATGAAGCCTTGGCCTTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491263.1
CDS TCA 72 bp GACATTGGGGTCCTCCTTGGCACATGTGAGAGAGTATaGAAGGTTCAGAATGAACCTTTCTGCTTTAGAGAG +
Preference number: 6 (lower is better)
Translates to: DIGVLLGTCERV*KVQNEPFCFRE
Trigger: CTCTCTAAAGCAGAAAGGTTCATTCTGAACCTTTCATACTCTCTCACATGTGCCAAGGAGGACCCCAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491263.1
CDS CAA 90 bp TCCTCTTGGCTCACTCTCTGGCAAATAACCACTTTGTCCTTCTTGTaGTGGGAAGAATTGTGTTCACAGGAATCAGATTTTTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SSWLTLWQITTLSFL*WEELCSQESDFCSR
Trigger: CCTGCTGCAAAAATCTGATTCCTGTGAACACAATTCTTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCAGAGAGTGAGCCAAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527393.5
ENST00000527809.5
ENST00000528938.1
ENST00000531057.5
ENST00000533019.1
CDS CAA 90 bp ACTCTCTGGCAAATAACCACTTTGTCCTTCTTGTTGTGGGAAGAATaGTGTTCACAGGAATCAGATTTTTGCAGCAGGAAACCTAGCCGA +
Preference number: 6 (lower is better)
Translates to: TLWQITTLSFLLWEE*CSQESDFCSRKPSR
Trigger: TCGGCTAGGTTTCCTGCTGCAAAAATCTGATTCCTGTGAACACAATTCTTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCAGAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527393.5
ENST00000527809.5
ENST00000528938.1
ENST00000531057.5
ENST00000533019.1
CDS CAA 90 bp ACTTCCTCTTGGCTCACTCTCTGGCAAATAACCACTTTGTCCTTCTaGTTGTGGGAAGAATTGTGTTCACAGGAATCAGATTTTTGCAGC +
Preference number: 6 (lower is better)
Translates to: TSSWLTLWQITTLSF*LWEELCSQESDFCS
Trigger: GCTGCAAAAATCTGATTCCTGTGAACACAATTCTTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCAGAGAGTGAGCCAAGAGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527393.5
ENST00000527809.5
ENST00000528938.1
ENST00000531057.5
ENST00000533019.1
CDS CAA 90 bp TACCTCTGGCAAATAACCACTTTGTCCTTCTTGTTGTGGGAAGAATaGTGTTCACAGGAATCAGATTTTTGCAGCAGGAAACCTAGCCGA +
Preference number: 6 (lower is better)
Translates to: YLWQITTLSFLLWEE*CSQESDFCSRKPSR
Trigger: TCGGCTAGGTTTCCTGCTGCAAAAATCTGATTCCTGTGAACACAATTCTTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCAGAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491263.1
CDS CAA 90 bp GGCCTTTTCTCTTACCTCTGGCAAATAACCACTTTGTCCTTCTTGTaGTGGGAAGAATTGTGTTCACAGGAATCAGATTTTTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: GLFSYLWQITTLSFL*WEELCSQESDFCSR
Trigger: CCTGCTGCAAAAATCTGATTCCTGTGAACACAATTCTTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCAGAGGTAAGAGAAAAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491263.1
CDS CAA 72 bp TGGCTCACTCTCTGGCAAATAACCACTTTGTCCTTCTaGTTGTGGGAAGAATTGTGTTCACAGGAATCAGAT +
Preference number: 6 (lower is better)
Translates to: WLTLWQITTLSF*LWEELCSQESD
Trigger: ATCTGATTCCTGTGAACACAATTCTTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCAGAGAGTGAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000527393.5
ENST00000527809.5
ENST00000528938.1
ENST00000531057.5
ENST00000533019.1
CDS CAA 90 bp CAAGGCCTTTTCTCTTACCTCTGGCAAATAACCACTTTGTCCTTCTaGTTGTGGGAAGAATTGTGTTCACAGGAATCAGATTTTTGCAGC +
Preference number: 6 (lower is better)
Translates to: QGLFSYLWQITTLSF*LWEELCSQESDFCS
Trigger: GCTGCAAAAATCTGATTCCTGTGAACACAATTCTTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCAGAGGTAAGAGAAAAGGCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491263.1
CDS CAA 90 bp CATCTTCACCAAGGCCTTTTCTCTTACCTCTGGCAAATAACCACTTaGTCCTTCTTGTTGTGGGAAGAATTGTGTTCACAGGAATCAGAT +
Preference number: 6 (lower is better)
Translates to: HLHQGLFSYLWQITT*SFLLWEELCSQESD
Trigger: ATCTGATTCCTGTGAACACAATTCTTCCCACAACAAGAAGGACAAAGTGGTTATTTGCCAGAGGTAAGAGAAAAGGCCTTGGTGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491263.1
CDS GCA 72 bp ATTCTAGGAACCTTCACTAAGATCCAGAGAGTTCTCTaGCATAAAAGCTTACCTTTTTGGTCAGGTTGGCTA +
Preference number: 6 (lower is better)
Translates to: ILGTFTKIQRVL*HKSLPFWSGWL
Trigger: TAGCCAACCTGACCAAAAAGGTAAGCTTTTATGGCAGAGAACTCTCTGGATCTTAGTGAAGGTTCCTAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491263.1
CDS CAA 72 bp CTGAGGAAAACAAGATTCCTCTTGGTTCCCTATGACTaGCTACAAAACCTTGAGGCAGTCATAACACCATTT +
Preference number: 6 (lower is better)
Translates to: LRKTRFLLVPYD*LQNLEAVITPF
Trigger: AAATGGTGTTATGACTGCCTCAAGGTTTTGTAGCAAGTCATAGGGAACCAAGAGGAATCTTGTTTTCCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528938.1
CDS CAA 90 bp TCTTTTGCACTCAGAAACCTGAGAAGCCTTTATATGCCCGTCATTTaGACCAACCGAATATCTTTGGTATCTTCAACAGAACCTGAATCA +
Preference number: 6 (lower is better)
Translates to: SFALRNLRSLYMPVI*TNRISLVSSTEPES
Trigger: TGATTCAGGTTCTGTTGAAGATACCAAAGATATTCGGTTGGTCAAAATGACGGGCATATAAAGGCTTCTCAGGTTTCTGAGTGCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367906.7
CDS GCA 72 bp AGGAATTCTGGAGCTTACTTAGGAGCTGACTCCCAATaGCTTTCCTCTTTTGGATTAGAAGCATCATATTAT +
Preference number: 6 (lower is better)
Translates to: RNSGAYLGADSQ*LSSFGLEASYY
Trigger: ATAATATGATGCTTCTAATCCAAAAGAGGAAAGGCATTGGGAGTCAGCTCCTAAGTAAGCTCCAGAATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527393.5
CDS CAA 72 bp CAAATAACCACTTTGTCCTTCTTGTTGTGGGAAGAATaGTGTTCACAGGAATCAGATTTTTGCAGCAGGAAA +
Preference number: 6 (lower is better)
Translates to: QITTLSFLLWEE*CSQESDFCSRK
Trigger: TTTCCTGCTGCAAAAATCTGATTCCTGTGAACACAATTCTTCCCACAACAAGAAGGACAAAGTGGTTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000367906.7
ENST00000367908.8
ENST00000367909.11
ENST00000421743.6
ENST00000491263.1
ENST00000527393.5
ENST00000527809.5
ENST00000528938.1
ENST00000531057.5
ENST00000533019.1
CDS CAA 72 bp GCCTTGGGACTTAGTTTAGATGGTGATTTGATTTTCTaGTACTCTTCACAGCTGATCCAGAAGTCAATATTC +
Preference number: 6 (lower is better)
Translates to: ALGLSLDGDLIF*YSSQLIQKSIF
Trigger: GAATATTGACTTCTGGATCAGCTGTGAAGAGTACAAGAAAATCAAATCACCATCTAAACTAAGTCCCAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367906.7
ENST00000367909.11
ENST00000421743.6
ENST00000491263.1
ENST00000527809.5
ENST00000528938.1
ENST00000531057.5
ENST00000533019.1
CDS CAA 72 bp CTTTATATGCCCGTCATTTTGACCAACCGAATATCTTaGGTATCTTCAACAGAACCTGAATCACTGAACACA +
Preference number: 6 (lower is better)
Translates to: LYMPVILTNRIS*VSSTEPESLNT
Trigger: TGTGTTCAGTGATTCAGGTTCTGTTGAAGATACCAAAGATATTCGGTTGGTCAAAATGACGGGCATATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367906.7
CDS CAA 90 bp AATACAGATCAATATTTGGCCTTGGGACTTAGTTTAGATGGTGATTaGATTTTCTTGTACTCTTCACAGCTGATCCAGAAGTCAATATTC +
Preference number: 6 (lower is better)
Translates to: NTDQYLALGLSLDGD*IFLYSSQLIQKSIF
Trigger: GAATATTGACTTCTGGATCAGCTGTGAAGAGTACAAGAAAATCAAATCACCATCTAAACTAAGTCCCAAGGCCAAATATTGATCTGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531057.5
CDS CAA 72 bp ATCTTTTGCACAGAGCATAACTTTCTCCTGACACTCTaGTATTTTTGTACGGTTCATTTCATATGCAAGTTA +
Preference number: 6 (lower is better)
Translates to: IFCTEHNFLLTL*YFCTVHFICKL
Trigger: TAACTTGCATATGAAATGAACCGTACAAAAATACAAGAGTGTCAGGAGAAAGTTATGCTCTGTGCAAAAGAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533019.1