Pregenerated sensors for RGS21 (Homo sapiens)
Ensembl gene IDs: ENSG00000253148Ensembl transcript IDs: ENST00000417209.2
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGCTCTATAAACTTTCTTaGTACTCCCCCAGTAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: CDAIELSQVIYFEKLWSMLYKLS*YSPSRR Trigger: TCTCCTACTGGGGGAGTACAAAGAAAGTTTATAGAG...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR CCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGGCATCTAGACCAGCTTaGTTGGCTAAAAGCGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMASRPA*LAKSVS Trigger: GGACACGCTTTTAGCCAACCAAGCTGGTCTAGATGC...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR TCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGACTGTCTGTCACAGATaGTGCCGAGTTTCTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMTVCHR*CRVSLS Trigger: AGAAAGAGAAACTCGGCATCATCTGTGACAGACAGT...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR TCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGTGTTTCCGCAGTTGGTaGCCTGTAGAAACAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMCFRSW*PVETAF Trigger: AAATGCTGTTTCTACAGGTCACCAACTGCGGAAACA...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR TCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGAGTATTCCCCACCCTTaGGGCCTTTTCATACATAAC | + |
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Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMSIPHP*GLFIHN Trigger: GTTATGTATGAAAAGGCCTCAAGGGTGGGGAATACT...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR TCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGTCAGTGCTGAAGGAGTaGATAGATACTTCCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMSVLKE*IDTSPQ Trigger: TTGTGGGGAAGTATCTATTCACTCCTTCAGCACTGA...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR CCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGCTAGACCAGCTTGGTTaGCTAAAAGCGTGTCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMLDQLG*LKACPY Trigger: ATATGGACACGCTTTTAGCCAACCAAGCTGGTCTAG...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR TCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGCAATATTCTTTGAGATaGGGTCTCTGGTACCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMQYSLR*GLWYRS Trigger: ACTTCGGTACCAGAGACCTCATCTCAAAGAATATTG...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR TCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGTTCAGCAATATTCTTTaGGATGAGGTCTCTGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMFSNIL*DEVSGT Trigger: GGTACCAGAGACCTCATCTCAAAGAATATTGCTGAA...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR GCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGTCAAGACAAATGCAATaGAGGGGAAATCACTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMSRQMQ*RGNHCP Trigger: AGGACAGTGATTTCCCCTGCATTGCATTTGTCTTGA...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR TCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGCCGAGTTTCTCTTTCTaGCTGATCTTCAAGACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMPSFSF*LIFKTN Trigger: ATTTGTCTTGAAGATCAGTCAGAAAGAGAAACTCGG...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR TCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGCCTCATCAAAGCATTTaGGTGTTGGTTCAGCAATAT | + |
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Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMPHQSI*VLVQQY Trigger: ATATTGCTGAACCAACACTCAAATGCTTTGATGAGG...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR GCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGGATCTTCAAGACAAATaGAATGCAGGGGAAATCACT | + |
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Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMDLQDK*NAGEIT Trigger: AGTGATTTCCCCTGCATTGCATTTGTCTTGAAGATC...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR CCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGGAAACAGCATTTCACTaGCATTTTTCGTTCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMETAFH*HFSFHC Trigger: ACAGTGGAACGAAAAATGCCAGTGAAATGCTGTTTC...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR TCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGGTTTCTCTTTCTGACTaGTCTTCAAGACAAATGCAA | + |
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Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMVSLSD*SSRQMQ Trigger: TTGCATTTGTCTTGAAGATCAGTCAGAAAGAGAAAC...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR GCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGAACTTTGGTCCATGGTaGATTCAAGACATACATATA | + |
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Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMNFGPW*IQDIHI Trigger: TATATGTATGTCTTGAATGCACCATGGACCAAAGTT...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR CCA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGAAAAACTTTGGTCCATaGTGCATTCAAGACATACAT | + |
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Preference number: 4 (lower is better) Translates to: CDAIELSQVIYFEKLWSMKNFGP*CIQDIH Trigger: ATGTATGTCTTGAATGCACCATGGACCAAAGTTTTT...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR CAA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGTCATTGTTTCCGCAGTaGGTGACCTGTAGAAACAGC | + |
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Preference number: 5 (lower is better) Translates to: CDAIELSQVIYFEKLWSMSLFPQ*VTCRNS Trigger: GCTGTTTCTACAGGTCACCAACTGCGGAAACAATGA...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR CAA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGTTTCAGACCATGTCATaGTTTCCGCAGTTGGTGACC | + |
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Preference number: 5 (lower is better) Translates to: CDAIELSQVIYFEKLWSMFQTMS*FPQLVT Trigger: GGTCACCAACTGCGGAAACAATGACATGGTCTGAAA...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR CAA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGTCTAGACCAGCTTGGTaGGCTAAAAGCGTGTCCATA | + |
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Preference number: 5 (lower is better) Translates to: CDAIELSQVIYFEKLWSMSRPAW*AKSVSI Trigger: TATGGACACGCTTTTAGCCAACCAAGCTGGTCTAGA...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR CAA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGACTGTCCTTGCTCTCTaGATTCCTTCTTTGTTGACA | + |
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Preference number: 5 (lower is better) Translates to: CDAIELSQVIYFEKLWSMTVLAL*IPSLLT Trigger: TGTCAACAAAGAAGGAATCAAGAGAGCAAGGACAGT...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS-3UTR CAA 90 bp | TGTGATGCCATTGAATTGAGCCAAGTGATATATTTTGAAAAACTTTGGTCCATGGCCTCATCAAAGCATTaGAGTGTTGGTTCAGCAATA | + |
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Preference number: 5 (lower is better) Translates to: CDAIELSQVIYFEKLWSMASSKH*SVGSAI Trigger: TATTGCTGAACCAACACTCAAATGCTTTGATGAGGC...CATGGACCAAAGTTTTTCAAAATATATCACTTGGCTCAATTCAATGGCATCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS CAA 90 bp | CAGCTTGGTTGGCTAAAAGCGTGTCCATATTTTCAGACCATGTCATaGTTTCCGCAGTTGGTGACCTGTAGAAACAGCATTTCACTGGCA | + |
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Preference number: 6 (lower is better) Translates to: QLGWLKACPYFQTMS*FPQLVTCRNSISLA Trigger: TGCCAGTGAAATGCTGTTTCTACAGGTCACCAACTGCGGAAACAATGACATGGTCTGAAAATATGGACACGCTTTTAGCCAACCAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS CAA 72 bp | TGGCTAAAAGCGTGTCCATATTTTCAGACCATGTCATaGTTTCCGCAGTTGGTGACCTGTAGAAACAGCATT | + |
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Preference number: 6 (lower is better) Translates to: WLKACPYFQTMS*FPQLVTCRNSI Trigger: AATGCTGTTTCTACAGGTCACCAACTGCGGAAACAATGACATGGTCTGAAAATATGGACACGCTTTTAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS TCA 72 bp | CATATTTTCAGACCATGTCATTGTTTCCGCAGTTGGTaGCCTGTAGAAACAGCATTTCACTGGCATTTTTCG | + |
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Preference number: 6 (lower is better) Translates to: HIFRPCHCFRSW*PVETAFHWHFS Trigger: CGAAAAATGCCAGTGAAATGCTGTTTCTACAGGTCACCAACTGCGGAAACAATGACATGGTCTGAAAATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS TCA 72 bp | CTGACTTCAGAAATCGAGGGAAAGAATCCTTGGCCATaGGACAATAGATTAATTTCTGAGCCTCATCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LTSEIEGKNPWP*DNRLISEPHQS Trigger: GCTTTGATGAGGCTCAGAAATTAATCTATTGTCTCATGGCCAAGGATTCTTTCCCTCGATTTCTGAAGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS CAA 72 bp | TGTCCATATTTTCAGACCATGTCATTGTTTCCGCAGTaGGTGACCTGTAGAAACAGCATTTCACTGGCATTT | + |
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Preference number: 6 (lower is better) Translates to: CPYFQTMSLFPQ*VTCRNSISLAF Trigger: AAATGCCAGTGAAATGCTGTTTCTACAGGTCACCAACTGCGGAAACAATGACATGGTCTGAAAATATGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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| CDS TCA 72 bp | ATCAAAGCATTTGAGTGTTGGTTCAGCAATATTCTTTaGGATGAGGTCTCTGGTACCGAAGTCAATGTTAAT | + |
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Preference number: 6 (lower is better) Translates to: IKAFECWFSNIL*DEVSGTEVNVN Trigger: ATTAACATTGACTTCGGTACCAGAGACCTCATCTCAAAGAATATTGCTGAACCAACACTCAAATGCTTTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417209.2 |
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