RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RGS20 (Homo sapiens)

Ensembl gene IDs: ENSG00000147509

Ensembl transcript IDs: ENST00000276500.4, ENST00000297313.8, ENST00000344277.10, ENST00000517659.5, ENST00000518286.5, ENST00000522225.5, ENST00000523064.1, ENST00000523280.1, ENST00000523414.5

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCATGCAAAATAAAAGTGGTTCCCTTTGCTCTGGTGGATGTACCTaGTCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGAC +
Preference number: 1 (lower is better)
Translates to: LMQNKSGSLCSGGCT*SGQQGAFCVALATD
Trigger: GTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGAGCAGGTACATCCACCAGAGCAAAGGGAACCACTTTTATTTTGCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR TCA 90 bp TACCTGCTCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTaGCAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTC +
Preference number: 1 (lower is better)
Translates to: YLLRAAGSLLCSLGH*QHATVIVNANTLSF
Trigger: GAAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGAGCAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR TCA 90 bp AATGCATTCCTTCCTGCTGGAGTGACCATTAATTTGTCAAATGACTaGGCCCAGGCGTTGACTTCTTCCAGAGTAGGAGCAGGGCTTTCT +
Preference number: 1 (lower is better)
Translates to: NAFLPAGVTINLSND*AQALTSSRVGAGLS
Trigger: AGAAAGCCCTGCTCCTACTCTGGAAGAAGTCAACGCCTGGGCTCAGTCATTTGACAAATTAATGGTCACTCCAGCAGGAAGGAATGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517659.5
3UTR TCA 90 bp TCTTTTATGAACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTaGCGTATTCAAACCGAGCTTGCTGGACAGAAGATGTCGTTGAGA +
Preference number: 1 (lower is better)
Translates to: SFMNCEFGSCNGTGK*RIQTELAGQKMSLR
Trigger: TCTCAACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGTTCATAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR TCA 90 bp GTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGAAGATGTCGTTaGGAAACACCTGAATGTCTTTTCTTTGAGGGGAGAGTAATCAGT +
Preference number: 1 (lower is better)
Translates to: VSDVFKPSLLDRRCR*ETPECLFFEGRVIS
Trigger: ACTGATTACTCTCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CCA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGTCTGCTCTGAGTTCGTaGGAAGCTATTGTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: SGQQGAFCVALATDNMLLSALSS*EAIVGL
Trigger: GAGGCCCACAATAGCTTCCCACGAACTCAGAGCAGA...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517659.5
3UTR-3UTR GCA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGTCTGGTGGATGTACCTaGTCCGGGCAGCAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVSGGCT*SGQQGA
Trigger: GGCTCCCTGCTGCCCGGAGCAGGTACATCCACCAGA...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTCTGGTGGATGTACCTaGTCCGGGCAGCAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSSGGCT*SGQQGA
Trigger: GGCTCCCTGCTGCCCGGAGCAGGTACATCCACCAGA...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGTCTGGTGGATGTACCTaGTCCGGGCAGCAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQSGGCT*SGQQGA
Trigger: GGCTCCCTGCTGCCCGGAGCAGGTACATCCACCAGA...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CCA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTCCCTTTGCTCTGGTaGATGTACCTGCTCCGGGCA +
Preference number: 2 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSFPLLW*MYLLRA
Trigger: TGCCCGGAGCAGGTACATCCACCAGAGCAAAGGGAA...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR TCA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCCCACCATGTTTCTGTTaGTCACTTCTCTCACCCGGG +
Preference number: 2 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSPPCFC*SLLSPG
Trigger: CCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGG...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGATCACTAAAGGTGGCTaGAGTTTACATGGTGAATAT +
Preference number: 2 (lower is better)
Translates to: SGQQGAFCVALATDNMLLITKGG*SLHGEY
Trigger: ATATTCACCATGTAAACTGCAGCCACCTTTAGTGAT...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CCA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCTTCCCTTTGCTCTGGTaGATGTACCTGCTCCGGGCA +
Preference number: 2 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTFPLLW*MYLLRA
Trigger: TGCCCGGAGCAGGTACATCCACCAGAGCAAAGGGAA...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTTTCCCTTTGCTCTGGTaGATGTACCTGCTCCGGGCA +
Preference number: 2 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIFPLLW*MYLLRA
Trigger: TGCCCGGAGCAGGTACATCCACCAGAGCAAAGGGAA...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CCA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGATCAAACCGAGCTTGCTaGACAGAAGATGTCGTTGAG +
Preference number: 2 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRSNRAC*TEDVVE
Trigger: CTCAACGACATCTTCTGTCCAGCAAGCTCGGTTTGA...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTTCTGGTGGATGTACCTaGTCCGGGCAGCAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFSGGCT*SGQQGA
Trigger: GGCTCCCTGCTGCCCGGAGCAGGTACATCCACCAGA...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGGAGGAATTCACGGAATaGATTCCTTCCTGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVEEFTE*IPSCWS
Trigger: ACTCCAGCAGGAAGGAATGCATTCCGTGAATTCCTC...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
3UTR-3UTR CCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTATTCCCTTTGCTCTGGTaGATGTACCTGCTCCGGGCA +
Preference number: 2 (lower is better)
Translates to: QTLETDPLQSTVLSINHVFPLLW*MYLLRA
Trigger: TGCCCGGAGCAGGTACATCCACCAGAGCAAAGGGAA...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGTTCCCTTTGCTCTGGTaGATGTACCTGCTCCGGGCA +
Preference number: 2 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQFPLLW*MYLLRA
Trigger: TGCCCGGAGCAGGTACATCCACCAGAGCAAAGGGAA...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CCA 90 bp GGGTGTAAATCTGAAGTTGAGCATCATCGAATATGTGTTGGGATGGCTCCACCACGTGGGAAGCTATTGTaGGCCTCTGATCTTCCTGGT +
Preference number: 2 (lower is better)
Translates to: GCKSEVEHHRICVGMAPPRGKLL*ASDLPG
Trigger: ACCAGGAAGATCAGAGGCCCACAATAGCTTCCCACG...TGGTGGAGCCATCCCAACACATATTCGATGATGCTCAACTTCAGATTTACACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517659.5
3UTR-3UTR TCA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGTGTAGCCTTGGCCACTaGCAACATGCTACTGTTATT +
Preference number: 2 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVCSLGH*QHATVI
Trigger: AATAACAGTAGCATGTTGTCAGTGGCCAAGGCTACA...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR TCA 90 bp GATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGGAGTCTAAGCTCTCCTTCCTGCTGGAGTaGCCATTAATTTGTCAAATG +
Preference number: 2 (lower is better)
Translates to: DGSTMFLLITSLTRESKLSFLLE*PLICQM
Trigger: CATTTGACAAATTAATGGTCACTCCAGCAGGAAGGA...GAGCTTAGACTCCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517659.5
3UTR-3UTR GCA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGATATTCAAACCGAGCTTaGTGGACAGAAGATGTCGTT +
Preference number: 2 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRYSNRA*WTEDVV
Trigger: AACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATA...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGCCAGGTTGGAAGATCTaGTCTGAGTTCGTGGGAAGC +
Preference number: 2 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQPGWKI*SEFVGS
Trigger: GCTTCCCACGAACTCAGAGCAGATCTTCCAACCTGG...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517659.5
3UTR-3UTR CCA 90 bp TGTTGGGATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGGAGTCTTCATCGAATATGTGTTaGGATGGCTCCACCATGTTT +
Preference number: 2 (lower is better)
Translates to: CWDGSTMFLLITSLTRESSSNMC*DGSTMF
Trigger: AAACATGGTGGAGCCATCCCAACACATATTCGATGA...AGACTCCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATCCCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
3UTR-3UTR TCA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTGTAGCCTTGGCCACTaGCAACATGCTACTGTTATT +
Preference number: 2 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSCSLGH*QHATVI
Trigger: AATAACAGTAGCATGTTGTCAGTGGCCAAGGCTACA...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR TCA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACTGTAGCCTTGGCCACTaGCAACATGCTACTGTTATT +
Preference number: 2 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHCSLGH*QHATVI
Trigger: AATAACAGTAGCATGTTGTCAGTGGCCAAGGCTACA...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR TCA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCAGACAGCAGAGTTCATaGATCGAGGATATGAGTCTC +
Preference number: 2 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSRQQSS*IEDMSL
Trigger: GAGACTCATATCCTCGATTCATGAACTCTGCTGTCT...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
3UTR-3UTR CCA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCTCAAACCGAGCTTGCTaGACAGAAGATGTCGTTGAG +
Preference number: 2 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTSNRAC*TEDVVE
Trigger: CTCAACGACATCTTCTGTCCAGCAAGCTCGGTTTGA...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CCA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGGAATATGTGTTGGGATaGCTCCACCATGTTTCTGTT +
Preference number: 2 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVEYVLG*LHHVSV
Trigger: AACAGAAACATGGTGGAGCCATCCCAACACATATTC...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
3UTR-3UTR TCA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCTGTAGCCTTGGCCACTaGCAACATGCTACTGTTATT +
Preference number: 2 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTCSLGH*QHATVI
Trigger: AATAACAGTAGCATGTTGTCAGTGGCCAAGGCTACA...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR TCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAATGGCACTGGTAAGTaGCGTATTCAAACCGAGCTT +
Preference number: 2 (lower is better)
Translates to: CCYQTLETDPLQSTVLSINGTGK*RIQTEL
Trigger: AAGCTCGGTTTGAATACGTCACTTACCAGTGCCATT...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR TCA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCAATGGCACTGGTAAGTaGCGTATTCAAACCGAGCTT +
Preference number: 2 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTNGTGK*RIQTEL
Trigger: AAGCTCGGTTTGAATACGTCACTTACCAGTGCCATT...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR TCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTACATGAATCGAGGATATaGGTCTCTGTGCATCAGGGT +
Preference number: 2 (lower is better)
Translates to: QTLETDPLQSTVLSINHVHESRI*VSVHQG
Trigger: ACCCTGATGCACAGAGACTCATATCCTCGATTCATG...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
3UTR-3UTR TCA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCAGACAGCAGAGTTCATaGATCGAGGATATGAGTCTC +
Preference number: 2 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTRQQSS*IEDMSL
Trigger: GAGACTCATATCCTCGATTCATGAACTCTGCTGTCT...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGAATCACTAAAGGTGGCTaGAGTTTACATGGTGAATAT +
Preference number: 2 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRITKGG*SLHGEY
Trigger: ATATTCACCATGTAAACTGCAGCCACCTTTAGTGAT...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CCA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTCATCGAATATGTGTTaGGATGGCTCCACCATGTTT +
Preference number: 2 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSSSNMC*DGSTMF
Trigger: AAACATGGTGGAGCCATCCCAACACATATTCGATGA...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
3UTR-3UTR TCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAATGGCACTGGTAAGTaGCGTATTCAAACCGAGCTT +
Preference number: 2 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQNGTGK*RIQTEL
Trigger: AAGCTCGGTTTGAATACGTCACTTACCAGTGCCATT...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGATCACTAAAGGTGGCTaGAGTTTACATGGTGAATAT +
Preference number: 2 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVITKGG*SLHGEY
Trigger: ATATTCACCATGTAAACTGCAGCCACCTTTAGTGAT...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTGGCCACTGACAACATaGTACTGTTATTGTAAATGC +
Preference number: 2 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSWPLTT*YCYCKC
Trigger: GCATTTACAATAACAGTAGCATGTTGTCAGTGGCCA...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTTTTTCTAAGCACTGCTaGTGTTACCAGACACTTGAG +
Preference number: 2 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIFSKHC*CYQTLE
Trigger: CTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAA...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCTTTTCTAAGCACTGCTaGTGTTACCAGACACTTGAG +
Preference number: 2 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTFSKHC*CYQTLE
Trigger: CTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAA...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp AATCTGAAGTTGAGCATCATCGAATATGTGTTGGGATGGCTCCACCATGTTTCTGAGGAATTCACGGAATaGATTCCTTCCTGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: NLKLSIIEYVLGWLHHVSEEFTE*IPSCWS
Trigger: ACTCCAGCAGGAAGGAATGCATTCCGTGAATTCCTC...AGAAACATGGTGGAGCCATCCCAACACATATTCGATGATGCTCAACTTCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
3UTR-3UTR TCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACAGAAGATGTCGTTaGGAAACACCTGAATGTCTT +
Preference number: 2 (lower is better)
Translates to: QTLETDPLQSTVLSINHVDRRCR*ETPECL
Trigger: AAGACATTCAGGTGTTTCTCAACGACATCTTCTGTC...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR TCA 90 bp AATCTGAAGTTGAGCATCATCGAATATGTGTTGGGATGGCTCCACCATGTTTCTAATTTGTCAAATGACTaGGCCCAGGCGTTGACTTCT +
Preference number: 2 (lower is better)
Translates to: NLKLSIIEYVLGWLHHVSNLSND*AQALTS
Trigger: AGAAGTCAACGCCTGGGCTCAGTCATTTGACAAATT...AGAAACATGGTGGAGCCATCCCAACACATATTCGATGATGCTCAACTTCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517659.5
3UTR-3UTR GCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTATATTCAAACCGAGCTTaGTGGACAGAAGATGTCGTT +
Preference number: 2 (lower is better)
Translates to: QTLETDPLQSTVLSINHVYSNRA*WTEDVV
Trigger: AACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATA...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTATTTTCTAAGCACTGCTaGTGTTACCAGACACTTGAG +
Preference number: 2 (lower is better)
Translates to: QTLETDPLQSTVLSINHVFSKHC*CYQTLE
Trigger: CTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAA...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGAATTTTCTAAGCACTaGTGCTGTTACCAGACACTT +
Preference number: 2 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLREFSKH*CCYQTL
Trigger: AAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGGAATTTTCTAAGCACTaGTGCTGTTACCAGACACTT +
Preference number: 2 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQEFSKH*CCYQTL
Trigger: AAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR CAA 90 bp TTTCAACAAAAGAATTTTCTAAGCACTGCTGCTGTTACCAGACACTaGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATG +
Preference number: 2 (lower is better)
Translates to: FQQKNFLSTAAVTRH*RLIHFRAQCFPLTM
Trigger: CATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTCTTTTGTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGACAGTTACCAAACTCATaGAAAATAAAAGTGGTTCCC +
Preference number: 2 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGQLPNS*KIKVVP
Trigger: GGGAACCACTTTTATTTTGCATGAGTTTGGTAACTG...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTACAGTTACCAAACTCATaGAAAATAAAAGTGGTTCCC +
Preference number: 2 (lower is better)
Translates to: QTLETDPLQSTVLSINHVQLPNS*KIKVVP
Trigger: GGGAACCACTTTTATTTTGCATGAGTTTGGTAACTG...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTGAATATGTGTTGGGATaGCTCCACCATGTTTCTGTT +
Preference number: 2 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFEYVLG*LHHVSV
Trigger: AACAGAAACATGGTGGAGCCATCCCAACACATATTC...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTATCACTAAAGGTGGCTaGAGTTTACATGGTGAATAT +
Preference number: 2 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFITKGG*SLHGEY
Trigger: ATATTCACCATGTAAACTGCAGCCACCTTTAGTGAT...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR GCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTCAGTTACCAAACTCATaGAAAATAAAAGTGGTTCCC +
Preference number: 2 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFQLPNS*KIKVVP
Trigger: GGGAACCACTTTTATTTTGCATGAGTTTGGTAACTG...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR GCA 72 bp AATAAAAGTGGTTCCCTTTGCTCTGGTGGATGTACCTaGTCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTG +
Preference number: 3 (lower is better)
Translates to: NKSGSLCSGGCT*SGQQGAFCVAL
Trigger: CAAGGCTACACAGAAGGCTCCCTGCTGCCCGGAGCAGGTACATCCACCAGAGCAAAGGGAACCACTTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR GCA 72 bp AGTAGGAGCAGGGCTTTCTTCCCAGGTTGGAAGATCTaGTCTGAGTTCGTGGGAAGCTATTGTGGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: SRSRAFFPGWKI*SEFVGSYCGPL
Trigger: CAGAGGCCCACAATAGCTTCCCACGAACTCAGAGCAGATCTTCCAACCTGGGAAGAAAGCCCTGCTCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517659.5
3UTR-3UTR CAA 90 bp TGTTGGGATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGGAGTCTGTTCGTGGGAAGCTATaGTGGGCCTCTGATCTTCCT +
Preference number: 3 (lower is better)
Translates to: CWDGSTMFLLITSLTRESVRGKL*WASDLP
Trigger: AGGAAGATCAGAGGCCCACAATAGCTTCCCACGAAC...AGACTCCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATCCCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517659.5
3UTR-3UTR CAA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCGCCTTCTGTGTAGCCTaGGCCACTGACAACATGCTA +
Preference number: 3 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSAFCVA*ATDNML
Trigger: TAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGC...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CAA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACGCCTTCTGTGTAGCCTaGGCCACTGACAACATGCTA +
Preference number: 3 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHAFCVA*ATDNML
Trigger: TAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGC...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CAA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGAGTATTCAAACCGAGCTaGCTGGACAGAAGATGTCGT +
Preference number: 3 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRVFKPS*LDRRCR
Trigger: ACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATAC...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CAA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGAGCTGTTACCAGACACTaGAGACTGATCCACTTCAGA +
Preference number: 3 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRAVTRH*RLIHFR
Trigger: TCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGC...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR TCA 72 bp CGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTaGCAACATGCTACTGTTATTGTAAATGCAAATACG +
Preference number: 3 (lower is better)
Translates to: RAAGSLLCSLGH*QHATVIVNANT
Trigger: CGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR TCA 72 bp CGAATATGTGTTGGGATGGCTCCACCATGTTTCTGTTaGTCACTTCTCTCACCCGGGAGTCTAAGCTCACCT +
Preference number: 3 (lower is better)
Translates to: RICVGMAPPCFC*SLLSPGSLSSP
Trigger: AGGTGAGCTTAGACTCCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATCCCAACACATATTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
3UTR-3UTR CAA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTGCCTTCTGTGTAGCCTaGGCCACTGACAACATGCTA +
Preference number: 3 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIAFCVA*ATDNML
Trigger: TAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGC...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CAA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGGTATTCAAACCGAGCTaGCTGGACAGAAGATGTCGT +
Preference number: 3 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVVFKPS*LDRRCR
Trigger: ACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATAC...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CAA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGGCTGTTACCAGACACTaGAGACTGATCCACTTCAGA +
Preference number: 3 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVAVTRH*RLIHFR
Trigger: TCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGC...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR TCA 72 bp CTTCCTGCTGGAGTGACCATTAATTTGTCAAATGACTaGGCCCAGGCGTTGACTTCTTCCAGAGTAGGAGCA +
Preference number: 3 (lower is better)
Translates to: LPAGVTINLSND*AQALTSSRVGA
Trigger: TGCTCCTACTCTGGAAGAAGTCAACGCCTGGGCTCAGTCATTTGACAAATTAATGGTCACTCCAGCAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517659.5
3UTR-3UTR CAA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGAGCCTTCTGTGTAGCCTaGGCCACTGACAACATGCTA +
Preference number: 3 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGAFCVA*ATDNML
Trigger: TAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGC...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CAA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGCCTTCTGTGTAGCCTaGGCCACTGACAACATGCTA +
Preference number: 3 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRAFCVA*ATDNML
Trigger: TAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGC...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CAA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCGTATTCAAACCGAGCTaGCTGGACAGAAGATGTCGT +
Preference number: 3 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTVFKPS*LDRRCR
Trigger: ACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATAC...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CAA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCGCTGTTACCAGACACTaGAGACTGATCCACTTCAGA +
Preference number: 3 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTAVTRH*RLIHFR
Trigger: TCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGC...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR TCA 72 bp AACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTaGCGTATTCAAACCGAGCTTGCTGGACAGAAGATG +
Preference number: 3 (lower is better)
Translates to: NCEFGSCNGTGK*RIQTELAGQKM
Trigger: CATCTTCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CAA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGTATTCAAACCGAGCTaGCTGGACAGAAGATGTCGT +
Preference number: 3 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRVFKPS*LDRRCR
Trigger: ACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATAC...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
3UTR-3UTR CAA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATCATCGAATATGTGTaGGGATGGCTCCACCATGTT +
Preference number: 3 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTIIEYV*GWLHHV
Trigger: AACATGGTGGAGCCATCCCAACACATATTCGATGAT...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
3UTR-3UTR CAA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAATCATCGAATATGTGTaGGGATGGCTCCACCATGTT +
Preference number: 3 (lower is better)
Translates to: QTLETDPLQSTVLSINHVIIEYV*GWLHHV
Trigger: AACATGGTGGAGCCATCCCAACACATATTCGATGAT...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
3UTR TCA 72 bp GTCCTTATAGACAGCAGAGTTCATGAATCGAGGATATaGGTCTCTGTGCATCAGGGTGTAAATCTGAAGTTG +
Preference number: 3 (lower is better)
Translates to: VLIDSRVHESRI*VSVHQGVNLKL
Trigger: CAACTTCAGATTTACACCCTGATGCACAGAGACTCATATCCTCGATTCATGAACTCTGCTGTCTATAAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR GCA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGGGCATAGGCGAGCTCTaGCCAGCGGTGGCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SGQQGAFCVALATDNMLLGIGEL*PAVASS
Trigger: AGAAGACGCCACCGCTGGGCAGAGCTCGCCTATGCC...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS-3UTR CCA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGAGCGCCTGGTGTGTCCTaGGCGGCGGGCATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRAPGVS*AAGICR
Trigger: GCGGCAGATGCCCGCCGCCCAGGACACACCAGGCGC...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
CDS-3UTR CCA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGAGAAGCAGCATGCGTTaGACCCGCGACTCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SGQQGAFCVALATDNMLLRSSMR*TRDSPL
Trigger: GAGCGGGGAGTCGCGGGTCCAACGCATGCTGCTTCT...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
CDS-3UTR GCA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGCCGGCTCTCGGTCTTTaGTCTAGCCCTCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SGQQGAFCVALATDNMLLPALGL*SSPLLP
Trigger: CGGGAGAAGAGGGCTAGAGCAAAGACCGAGAGCCGG...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522225.5
CDS-3UTR GCA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGCATGCGTCCCGCGGGTaGCTTCTCAATATTGCAGCG +
Preference number: 4 (lower is better)
Translates to: SGQQGAFCVALATDNMLLHASRG*LLNIAA
Trigger: CGCTGCAATATTGAGAAGGCACCCGCGGGACGCATG...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276500.4
ENST00000522225.5
CDS-3UTR GCA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACCGTCCGCCGTGCGCATaGGTCCCGCGGGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHRPPCA*VPRVPS
Trigger: AGAAGGCACCCGCGGGACGCATGCGCACGGCGGACG...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276500.4
ENST00000522225.5
CDS-3UTR GCA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGACCAGCAGAAGCAGCATaGGTTGGACCCGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRPAEAA*VGPATP
Trigger: GGGAGTCGCGGGTCCAACGCATGCTGCTTCTGCTGG...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
CDS-3UTR CCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGCGCCTGGTGTGTCCTaGGCGGCGGGCATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QTLETDPLQSTVLSINHVAPGVS*AAGICR
Trigger: GCGGCAGATGCCCGCCGCCCAGGACACACCAGGCGC...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
CDS-3UTR CCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGAGCGCCTGGTGTGTCCTaGGCGGCGGGCATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGAPGVS*AAGICR
Trigger: GCGGCAGATGCCCGCCGCCCAGGACACACCAGGCGC...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
CDS-3UTR TCA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGTATATCTCTGAGCCCTaGACAGGGGCAGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: SGQQGAFCVALATDNMLLYISEP*TGAETV
Trigger: CACAGTTTCTGCCCCTGTTCAGGGCTCAGAGATATA...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR GCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTACGTCCGCCGTGCGCATaGGTCCCGCGGGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QTLETDPLQSTVLSINHVRPPCA*VPRVPS
Trigger: AGAAGGCACCCGCGGGACGCATGCGCACGGCGGACG...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276500.4
ENST00000522225.5
CDS-3UTR GCA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCCAGCAGAAGCAGCATaGGTTGGACCCGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVPAEAA*VGPATP
Trigger: GGGAGTCGCGGGTCCAACGCATGCTGCTTCTGCTGG...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
CDS-3UTR TCA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGTCTGTATTATATCTCTaGGCCCTGAACAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SGQQGAFCVALATDNMLLSVLYL*ALNRGR
Trigger: TCTGCCCCTGTTCAGGGCTCAGAGATATAATACAGA...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGAGTGCCTTCTCAATATTaGAGCGCGGAGGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRVPSQY*SAEGCP
Trigger: AGGGCAGCCCTCCGCGCTGCAATATTGAGAAGGCAC...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276500.4
ENST00000522225.5
CDS-3UTR GCA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCTGGGCGGCGGGCATCTaGCGCTTCCGCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTWAAGI*RFRISI
Trigger: GATGGAGATGCGGAAGCGGCAGATGCCCGCCGCCCA...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
CDS-3UTR CCA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGTCAAACCGAGCTTGCTaGACAGAAGATGTCGTTGAG +
Preference number: 4 (lower is better)
Translates to: SGQQGAFCVALATDNMLLSNRAC*TEDVVE
Trigger: CTCAACGACATCTTCTGTCCAGCAAGCTCGGTTTGA...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCATCTCCATCCGCTCTaGTCCCATCTGCGGCATAGG +
Preference number: 4 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVHLHPL*SHLRHR
Trigger: CCTATGCCGCAGATGGGATCAGAGCGGATGGAGATG...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS-3UTR GCA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCCTCTACGTCGGCGATTaGTCACCGCGCCTTTCGCCT +
Preference number: 4 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSLYVGD*SPRLSP
Trigger: AGGCGAAAGGCGCGGTGAGCAATCGCCGACGTAGAG...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276500.4
ENST00000522225.5
CDS-3UTR GCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGTGCAGCGCGGAGGGCTaGCCTCTCTACGTCGGCGAT +
Preference number: 4 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQCSAEG*PLYVGD
Trigger: ATCGCCGACGTAGAGAGGGCAGCCCTCCGCGCTGCA...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276500.4
ENST00000522225.5
CDS-3UTR GCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGTGCAGCGCGGAGGGCTaGCCTCTCTACGTCGGCGAT +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRCSAEG*PLYVGD
Trigger: ATCGCCGACGTAGAGAGGGCAGCCCTCCGCGCTGCA...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276500.4
ENST00000522225.5
CDS-3UTR CCA 90 bp GATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGGAGTCTAAGCTCTTCCCTTTGCTCTGGTaGATGTACCTGCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: DGSTMFLLITSLTRESKLFPLLW*MYLLRA
Trigger: TGCCCGGAGCAGGTACATCCACCAGAGCAAAGGGAA...GAGCTTAGACTCCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGTCCTTCCTGCTGGAGTaGCCATTAATTTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: SGQQGAFCVALATDNMLLSFLLE*PLICQM
Trigger: CATTTGACAAATTAATGGTCACTCCAGCAGGAAGGA...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGACCACCATGTTTCTGTTaGTCACTTCTCTCACCCGGG +
Preference number: 4 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRPPCFC*SLLSPG
Trigger: CCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGG...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGCCAGCAGAAGCAGCATaGGTTGGACCCGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRPAEAA*VGPATP
Trigger: GGGAGTCGCGGGTCCAACGCATGCTGCTTCTGCTGG...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
CDS-3UTR GCA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGACCAGGTTGGAAGATCTaGTCTGAGTTCGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRPGWKI*SEFVGS
Trigger: GCTTCCCACGAACTCAGAGCAGATCTTCCAACCTGG...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR GCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGATCTGGTGGATGTACCTaGTCCGGGCAGCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGSGGCT*SGQQGA
Trigger: GGCTCCCTGCTGCCCGGAGCAGGTACATCCACCAGA...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTATCTGGTGGATGTACCTaGTCCGGGCAGCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QTLETDPLQSTVLSINHVSGGCT*SGQQGA
Trigger: GGCTCCCTGCTGCCCGGAGCAGGTACATCCACCAGA...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACCGAGTCTGGGAGCTGTaGAGGCGGGAAGGACTTGAT +
Preference number: 4 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHRVWEL*RREGLD
Trigger: ATCAAGTCCTTCCCGCCTGCACAGCTCCCAGACTCG...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS-3UTR CCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGACGCTCTGATCCCATCTaGAGCCCACCGTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGRSDPI*SPPSTL
Trigger: CAGGGTGGACGGTGGGCTCCAGATGGGATCAGAGCG...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276500.4
CDS-3UTR CCA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGTCATCGAATATGTGTTaGGATGGCTCCACCATGTTT +
Preference number: 4 (lower is better)
Translates to: SGQQGAFCVALATDNMLLSSNMC*DGSTMF
Trigger: AAACATGGTGGAGCCATCCCAACACATATTCGATGA...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTGGCGGCGGGCGAGTCTaGGAGCTGTGCAGGCGGGAA +
Preference number: 4 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFGGGRV*ELCRRE
Trigger: TTCCCGCCTGCACAGCTCCCAGACTCGCCCGCCGCC...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS-3UTR TCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGCATCTCCATCCGCTCTaGTCCCATCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRHLHPL*SHLEPT
Trigger: GGTGGGCTCCAGATGGGATCAGAGCGGATGGAGATG...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276500.4
CDS-3UTR TCA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGATATATCTCTGAGCCCTaGACAGGGGCAGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRYISEP*TGAETV
Trigger: CACAGTTTCTGCCCCTGTTCAGGGCTCAGAGATATA...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGCTCTACGTCGGCGATTaGTCACCGCGCCTTTCGCCT +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRLYVGD*SPRLSP
Trigger: AGGCGAAAGGCGCGGTGAGCAATCGCCGACGTAGAG...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276500.4
ENST00000522225.5
CDS-3UTR GCA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGGAATTTTCTAAGCACTaGTGCTGTTACCAGACACTT +
Preference number: 4 (lower is better)
Translates to: SGQQGAFCVALATDNMLLEFSKH*CCYQTL
Trigger: AAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGCCAAATGAGTCCTGTTaGCTGGTTTTCCCAATATTA +
Preference number: 4 (lower is better)
Translates to: SGQQGAFCVALATDNMLLPNESC*LVFPIL
Trigger: TAATATTGGGAAAACCAGGCAACAGGACTCATTTGG...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS-3UTR CCA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACTTCCCTTTGCTCTGGTaGATGTACCTGCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHFPLLW*MYLLRA
Trigger: TGCCCGGAGCAGGTACATCCACCAGAGCAAAGGGAA...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGTGGCGTCTTCTTCCCTaGGCTTGGCTACCGGATGGG +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRWRLLP*AWLPDG
Trigger: CCCATCCGGTAGCCAAGCCCAGGGAAGAAGACGCCA...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS-3UTR CCA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACCGTGGGAAGCTATTGTaGGCCTCTGATCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHRGKLL*ASDLPG
Trigger: ACCAGGAAGATCAGAGGCCCACAATAGCTTCCCACG...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR CCA 90 bp AATATGTGTTGGGATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGCGTGGGAAGCTATTGTaGGCCTCTGATCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: NMCWDGSTMFLLITSLTRRGKLL*ASDLPG
Trigger: ACCAGGAAGATCAGAGGCCCACAATAGCTTCCCACG...CCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATCCCAACACATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517659.5
CDS-3UTR CCA 90 bp AATATGTGTTGGGATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGTCTGCTCTGAGTTCGTaGGAAGCTATTGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: NMCWDGSTMFLLITSLTRSALSS*EAIVGL
Trigger: GAGGCCCACAATAGCTTCCCACGAACTCAGAGCAGA...CCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATCCCAACACATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517659.5
CDS-3UTR CCA 90 bp TGTTGGGATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGGAGTCTTCAAACCGAGCTTGCTaGACAGAAGATGTCGTTGAG +
Preference number: 4 (lower is better)
Translates to: CWDGSTMFLLITSLTRESSNRAC*TEDVVE
Trigger: CTCAACGACATCTTCTGTCCAGCAAGCTCGGTTTGA...AGACTCCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATCCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR CCA 90 bp GATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGGAGTCTAAGCTCTCAAACCGAGCTTGCTaGACAGAAGATGTCGTTGAG +
Preference number: 4 (lower is better)
Translates to: DGSTMFLLITSLTRESKLSNRAC*TEDVVE
Trigger: CTCAACGACATCTTCTGTCCAGCAAGCTCGGTTTGA...GAGCTTAGACTCCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCATGAATCGAGGATATaGGTCTCTGTGCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVHESRI*VSVHQG
Trigger: ACCCTGATGCACAGAGACTCATATCCTCGATTCATG...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp GATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGGAGTCTAAGCTCTGTAGCCTTGGCCACTaGCAACATGCTACTGTTATT +
Preference number: 4 (lower is better)
Translates to: DGSTMFLLITSLTRESKLCSLGH*QHATVI
Trigger: AATAACAGTAGCATGTTGTCAGTGGCCAAGGCTACA...GAGCTTAGACTCCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TGTTGGGATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGGAGTCTAATGGCACTGGTAAGTaGCGTATTCAAACCGAGCTT +
Preference number: 4 (lower is better)
Translates to: CWDGSTMFLLITSLTRESNGTGK*RIQTEL
Trigger: AAGCTCGGTTTGAATACGTCACTTACCAGTGCCATT...AGACTCCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATCCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR GCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTCCAGGTTGGAAGATCTaGTCTGAGTTCGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIPGWKI*SEFVGS
Trigger: GCTTCCCACGAACTCAGAGCAGATCTTCCAACCTGG...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR CCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTCGTGGGAAGCTATTGTaGGCCTCTGATCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIRGKLL*ASDLPG
Trigger: ACCAGGAAGATCAGAGGCCCACAATAGCTTCCCACG...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR CCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGATTCCCTTTGCTCTGGTaGATGTACCTGCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGFPLLW*MYLLRA
Trigger: TGCCCGGAGCAGGTACATCCACCAGAGCAAAGGGAA...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGATCCTTCCTGCTGGAGTaGCCATTAATTTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRSFLLE*PLICQM
Trigger: CATTTGACAAATTAATGGTCACTCCAGCAGGAAGGA...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGCCACCATGTTTCTGTTaGTCACTTCTCTCACCCGGG +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRPPCFC*SLLSPG
Trigger: CCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGG...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGCCACCATGTTTCTGTTaGTCACTTCTCTCACCCGGG +
Preference number: 4 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQPPCFC*SLLSPG
Trigger: CCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGG...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGACCACCATGTTTCTGTTaGTCACTTCTCTCACCCGGG +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGPPCFC*SLLSPG
Trigger: CCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGG...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACCATGAATCGAGGATATaGGTCTCTGTGCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHHESRI*VSVHQG
Trigger: ACCCTGATGCACAGAGACTCATATCCTCGATTCATG...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp AATATGTGTTGGGATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGCATGAATCGAGGATATaGGTCTCTGTGCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: NMCWDGSTMFLLITSLTRHESRI*VSVHQG
Trigger: ACCCTGATGCACAGAGACTCATATCCTCGATTCATG...CCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATCCCAACACATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TGTTGGGATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGGAGTCTGACAGAAGATGTCGTTaGGAAACACCTGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: CWDGSTMFLLITSLTRESDRRCR*ETPECL
Trigger: AAGACATTCAGGTGTTTCTCAACGACATCTTCTGTC...AGACTCCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATCCCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR GCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTACCAGGTTGGAAGATCTaGTCTGAGTTCGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: QTLETDPLQSTVLSINHVPGWKI*SEFVGS
Trigger: GCTTCCCACGAACTCAGAGCAGATCTTCCAACCTGG...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR GCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGACCAGGTTGGAAGATCTaGTCTGAGTTCGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGPGWKI*SEFVGS
Trigger: GCTTCCCACGAACTCAGAGCAGATCTTCCAACCTGG...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR GCA 90 bp AATATGTGTTGGGATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGGAGGAATTCACGGAATaGATTCCTTCCTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: NMCWDGSTMFLLITSLTREEFTE*IPSCWS
Trigger: ACTCCAGCAGGAAGGAATGCATTCCGTGAATTCCTC...CCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATCCCAACACATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACGAGGAATTCACGGAATaGATTCCTTCCTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHEEFTE*IPSCWS
Trigger: ACTCCAGCAGGAAGGAATGCATTCCGTGAATTCCTC...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGATTTTCTAAGCACTGCTaGTGTTACCAGACACTTGAG +
Preference number: 4 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRFSKHC*CYQTLE
Trigger: CTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAA...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGGAGTCTAAGCTCTTTTCTAAGCACTGCTaGTGTTACCAGACACTTGAG +
Preference number: 4 (lower is better)
Translates to: DGSTMFLLITSLTRESKLFSKHC*CYQTLE
Trigger: CTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAA...GAGCTTAGACTCCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR CCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGCGTGGGAAGCTATTGTaGGCCTCTGATCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQRGKLL*ASDLPG
Trigger: ACCAGGAAGATCAGAGGCCCACAATAGCTTCCCACG...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR CCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGCGTGGGAAGCTATTGTaGGCCTCTGATCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRRGKLL*ASDLPG
Trigger: ACCAGGAAGATCAGAGGCCCACAATAGCTTCCCACG...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR CCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGTCTGCTCTGAGTTCGTaGGAAGCTATTGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQSALSS*EAIVGL
Trigger: GAGGCCCACAATAGCTTCCCACGAACTCAGAGCAGA...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR CCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTATCTGCTCTGAGTTCGTaGGAAGCTATTGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QTLETDPLQSTVLSINHVSALSS*EAIVGL
Trigger: GAGGCCCACAATAGCTTCCCACGAACTCAGAGCAGA...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR CCA 90 bp GGGCTTTCTTCCCAGGTTGGAAGATCTGCTCTGAGTTCGTGGGAAGCTATTGTGTCATCGAATATGTGTTaGGATGGCTCCACCATGTTT +
Preference number: 4 (lower is better)
Translates to: GLSSQVGRSALSSWEAIVSSNMC*DGSTMF
Trigger: AAACATGGTGGAGCCATCCCAACACATATTCGATGA...CACAATAGCTTCCCACGAACTCAGAGCAGATCTTCCAACCTGGGAAGAAAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517659.5
CDS-3UTR CCA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTCAAACCGAGCTTGCTaGACAGAAGATGTCGTTGAG +
Preference number: 4 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSSNRAC*TEDVVE
Trigger: CTCAACGACATCTTCTGTCCAGCAAGCTCGGTTTGA...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCACTCTTGGTTATCTTaGGAAAGCTGGGGCATGTTT +
Preference number: 4 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVHSWLS*ESWGMF
Trigger: AAACATGCCCCAGCTTTCCCAAGATAACCAAGAGTG...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS-3UTR CCA 90 bp AATATGTGTTGGGATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGTTCTGGAGGCACTCTTaGTTATCTTGGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: NMCWDGSTMFLLITSLTRFWRHS*LSWESW
Trigger: CCAGCTTTCCCAAGATAACCAAGAGTGCCTCCAGAA...CCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATCCCAACACATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTCATGAATCGAGGATATaGGTCTCTGTGCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIHESRI*VSVHQG
Trigger: ACCCTGATGCACAGAGACTCATATCCTCGATTCATG...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACAGACAGCAGAGTTCATaGATCGAGGATATGAGTCTC +
Preference number: 4 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHRQQSS*IEDMSL
Trigger: GAGACTCATATCCTCGATTCATGAACTCTGCTGTCT...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGGACAGAAGATGTCGTTaGGAAACACCTGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVDRRCR*ETPECL
Trigger: AAGACATTCAGGTGTTTCTCAACGACATCTTCTGTC...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACAATGGCACTGGTAAGTaGCGTATTCAAACCGAGCTT +
Preference number: 4 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHNGTGK*RIQTEL
Trigger: AAGCTCGGTTTGAATACGTCACTTACCAGTGCCATT...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCAATGGCACTGGTAAGTaGCGTATTCAAACCGAGCTT +
Preference number: 4 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSNGTGK*RIQTEL
Trigger: AAGCTCGGTTTGAATACGTCACTTACCAGTGCCATT...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGTATATCTCTGAGCCCTaGACAGGGGCAGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRYISEP*TGAETV
Trigger: CACAGTTTCTGCCCCTGTTCAGGGCTCAGAGATATA...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTATATATCTCTGAGCCCTaGACAGGGGCAGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: QTLETDPLQSTVLSINHVYISEP*TGAETV
Trigger: CACAGTTTCTGCCCCTGTTCAGGGCTCAGAGATATA...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTTCTGTATTATATCTCTaGGCCCTGAACAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CCYQTLETDPLQSTVLSISVLYL*ALNRGR
Trigger: TCTGCCCCTGTTCAGGGCTCAGAGATATAATACAGA...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCTCTGTATTATATCTCTaGGCCCTGAACAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTSVLYL*ALNRGR
Trigger: TCTGCCCCTGTTCAGGGCTCAGAGATATAATACAGA...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGCATCTCCATCCGCTCTaGTCCCATCTGCTTGATATC +
Preference number: 4 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQHLHPL*SHLLDI
Trigger: GATATCAAGCAGATGGGATCAGAGCGGATGGAGATG...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344277.10
CDS-3UTR GCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTCATGCGTCCCGCGGGTaGCTTCTCAATATTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFHASRG*LLNIAA
Trigger: CGCTGCAATATTGAGAAGGCACCCGCGGGACGCATG...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276500.4
ENST00000522225.5
CDS-3UTR GCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTGAGGAATTCACGGAATaGATTCCTTCCTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIEEFTE*IPSCWS
Trigger: ACTCCAGCAGGAAGGAATGCATTCCGTGAATTCCTC...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGATGGCCACTGACAACATaGTACTGTTATTGTAAATGC +
Preference number: 4 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRWPLTT*YCYCKC
Trigger: GCATTTACAATAACAGTAGCATGTTGTCAGTGGCCA...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGTCATCGAATATGTGTTaGGATGGCTCCACCATGTTT +
Preference number: 4 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVSSNMC*DGSTMF
Trigger: AAACATGGTGGAGCCATCCCAACACATATTCGATGA...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCTTCTGGAGGCACTCTTaGTTATCTTGGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTFWRHS*LSWESW
Trigger: CCAGCTTTCCCAAGATAACCAAGAGTGCCTCCAGAA...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAATTTGTCAAATGACTaGGCCCAGGCGTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: CCYQTLETDPLQSTVLSINLSND*AQALTS
Trigger: AGAAGTCAACGCCTGGGCTCAGTCATTTGACAAATT...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAGACAGCAGAGTTCATaGATCGAGGATATGAGTCTC +
Preference number: 4 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIRQQSS*IEDMSL
Trigger: GAGACTCATATCCTCGATTCATGAACTCTGCTGTCT...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCGACAGAAGATGTCGTTaGGAAACACCTGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSDRRCR*ETPECL
Trigger: AAGACATTCAGGTGTTTCTCAACGACATCTTCTGTC...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGATATCAGGAACAGCCCTaGGGTCTCCTTCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGYQEQP*GLLHFL
Trigger: CAGAAAATGAAGGAGACCTCAGGGCTGTTCCTGATA...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTATATCAGGAACAGCCCTaGGGTCTCCTTCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: QTLETDPLQSTVLSINHVYQEQP*GLLHFL
Trigger: CAGAAAATGAAGGAGACCTCAGGGCTGTTCCTGATA...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGGAGGAATTCACGGAATaGATTCCTTCCTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQEEFTE*IPSCWS
Trigger: ACTCCAGCAGGAAGGAATGCATTCCGTGAATTCCTC...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGACAGTTACCAAACTCATaGAAAATAAAAGTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRQLPNS*KIKVVP
Trigger: GGGAACCACTTTTATTTTGCATGAGTTTGGTAACTG...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACTATTCAAACCGAGCTTaGTGGACAGAAGATGTCGTT +
Preference number: 4 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHYSNRA*WTEDVV
Trigger: AACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATA...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACTTTTCTAAGCACTGCTaGTGTTACCAGACACTTGAG +
Preference number: 4 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHFSKHC*CYQTLE
Trigger: CTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAA...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGTCAAACCGAGCTTGCTaGACAGAAGATGTCGTTGAG +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRSNRAC*TEDVVE
Trigger: CTCAACGACATCTTCTGTCCAGCAAGCTCGGTTTGA...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGCTGCTTCTCTTTGTTTaGTTAATGCTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRLLLFV*LMLGWL
Trigger: GAGCCAGCCCAGCATTAACCAAACAAAGAGAAGCAG...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS-3UTR CCA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCCTGGAGAAATGTTTCTaGAGGCACTCTTGGTTATCT +
Preference number: 4 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSLEKCF*RHSWLS
Trigger: AGATAACCAAGAGTGCCTCCAGAAACATTTCTCCAG...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAATTTGTCAAATGACTaGGCCCAGGCGTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQNLSND*AQALTS
Trigger: AGAAGTCAACGCCTGGGCTCAGTCATTTGACAAATT...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGAATTTGTCAAATGACTaGGCCCAGGCGTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRNLSND*AQALTS
Trigger: AGAAGTCAACGCCTGGGCTCAGTCATTTGACAAATT...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTTCCTTCCTGCTGGAGTaGCCATTAATTTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: CCYQTLETDPLQSTVLSISFLLE*PLICQM
Trigger: CATTTGACAAATTAATGGTCACTCCAGCAGGAAGGA...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAAGACAGCAGAGTTCATaGATCGAGGATATGAGTCTC +
Preference number: 4 (lower is better)
Translates to: QTLETDPLQSTVLSINHVRQQSS*IEDMSL
Trigger: GAGACTCATATCCTCGATTCATGAACTCTGCTGTCT...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGATGTAGCCTTGGCCACTaGCAACATGCTACTGTTATT +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGCSLGH*QHATVI
Trigger: AATAACAGTAGCATGTTGTCAGTGGCCAAGGCTACA...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTGACAGAAGATGTCGTTaGGAAACACCTGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIDRRCR*ETPECL
Trigger: AAGACATTCAGGTGTTTCTCAACGACATCTTCTGTC...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGAAATGGCACTGGTAAGTaGCGTATTCAAACCGAGCTT +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGNGTGK*RIQTEL
Trigger: AAGCTCGGTTTGAATACGTCACTTACCAGTGCCATT...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAAATAAAGGCCCCAAATaGGTCCTGTTGCCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: QTLETDPLQSTVLSINHVNKGPK*VLLPGF
Trigger: AAAACCAGGCAACAGGACTCATTTGGGGCCTTTATT...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS-3UTR TCA 90 bp AATCTGAAGTTGAGCATCATCGAATATGTGTTGGGATGGCTCCACCATGTTTCTTCTGTATTATATCTCTaGGCCCTGAACAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: NLKLSIIEYVLGWLHHVSSVLYL*ALNRGR
Trigger: TCTGCCCCTGTTCAGGGCTCAGAGATATAATACAGA...AGAAACATGGTGGAGCCATCCCAACACATATTCGATGATGCTCAACTTCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp AATCTGAAGTTGAGCATCATCGAATATGTGTTGGGATGGCTCCACCATGTTTCTTATCAGGAACAGCCCTaGGGTCTCCTTCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: NLKLSIIEYVLGWLHHVSYQEQP*GLLHFL
Trigger: CAGAAAATGAAGGAGACCTCAGGGCTGTTCCTGATA...AGAAACATGGTGGAGCCATCCCAACACATATTCGATGATGCTCAACTTCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR GCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTCCAGGTTGGAAGATCTaGTCTGAGTTCGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFPGWKI*SEFVGS
Trigger: GCTTCCCACGAACTCAGAGCAGATCTTCCAACCTGG...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR GCA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACTGGCCACTGACAACATaGTACTGTTATTGTAAATGC +
Preference number: 4 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHWPLTT*YCYCKC
Trigger: GCATTTACAATAACAGTAGCATGTTGTCAGTGGCCA...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCAGTTACCAAACTCATaGAAAATAAAAGTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVQLPNS*KIKVVP
Trigger: GGGAACCACTTTTATTTTGCATGAGTTTGGTAACTG...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GGGTGTAAATCTGAAGTTGAGCATCATCGAATATGTGTTGGGATGGCTCCACCATATTCAAACCGAGCTTaGTGGACAGAAGATGTCGTT +
Preference number: 4 (lower is better)
Translates to: GCKSEVEHHRICVGMAPPYSNRA*WTEDVV
Trigger: AACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATA...TGGTGGAGCCATCCCAACACATATTCGATGATGCTCAACTTCAGATTTACACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACGAATTTTCTAAGCACTaGTGCTGTTACCAGACACTT +
Preference number: 4 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHEFSKH*CCYQTL
Trigger: AAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTTCTGCTCTGAGTTCGTaGGAAGCTATTGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFSALSS*EAIVGL
Trigger: GAGGCCCACAATAGCTTCCCACGAACTCAGAGCAGA...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR CCA 90 bp GGGTGTAAATCTGAAGTTGAGCATCATCGAATATGTGTTGGGATGGCTCCACCAGAATATGTGTTGGGATaGCTCCACCATGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GCKSEVEHHRICVGMAPPEYVLG*LHHVSV
Trigger: AACAGAAACATGGTGGAGCCATCCCAACACATATTC...TGGTGGAGCCATCCCAACACATATTCGATGATGCTCAACTTCAGATTTACACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR CCA 90 bp GGGTGTAAATCTGAAGTTGAGCATCATCGAATATGTGTTGGGATGGCTCCACCATCATCGAATATGTGTTaGGATGGCTCCACCATGTTT +
Preference number: 4 (lower is better)
Translates to: GCKSEVEHHRICVGMAPPSSNMC*DGSTMF
Trigger: AAACATGGTGGAGCCATCCCAACACATATTCGATGA...TGGTGGAGCCATCCCAACACATATTCGATGATGCTCAACTTCAGATTTACACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp AATCTGAAGTTGAGCATCATCGAATATGTGTTGGGATGGCTCCACCATGTTTCTAGACAGCAGAGTTCATaGATCGAGGATATGAGTCTC +
Preference number: 4 (lower is better)
Translates to: NLKLSIIEYVLGWLHHVSRQQSS*IEDMSL
Trigger: GAGACTCATATCCTCGATTCATGAACTCTGCTGTCT...AGAAACATGGTGGAGCCATCCCAACACATATTCGATGATGCTCAACTTCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp AATCTGAAGTTGAGCATCATCGAATATGTGTTGGGATGGCTCCACCATGTTTCTTGTAGCCTTGGCCACTaGCAACATGCTACTGTTATT +
Preference number: 4 (lower is better)
Translates to: NLKLSIIEYVLGWLHHVSCSLGH*QHATVI
Trigger: AATAACAGTAGCATGTTGTCAGTGGCCAAGGCTACA...AGAAACATGGTGGAGCCATCCCAACACATATTCGATGATGCTCAACTTCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGAGACAGAAGATGTCGTTaGGAAACACCTGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGDRRCR*ETPECL
Trigger: AAGACATTCAGGTGTTTCTCAACGACATCTTCTGTC...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCATCACTAAAGGTGGCTaGAGTTTACATGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSITKGG*SLHGEY
Trigger: ATATTCACCATGTAAACTGCAGCCACCTTTAGTGAT...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGTATTCAAACCGAGCTTaGTGGACAGAAGATGTCGTT +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRYSNRA*WTEDVV
Trigger: AACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATA...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGATATTCAAACCGAGCTTaGTGGACAGAAGATGTCGTT +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGYSNRA*WTEDVV
Trigger: AACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATA...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGATTTTCTAAGCACTGCTaGTGTTACCAGACACTTGAG +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGFSKHC*CYQTLE
Trigger: CTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAA...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGTTTTCTAAGCACTGCTaGTGTTACCAGACACTTGAG +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRFSKHC*CYQTLE
Trigger: CTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAA...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCGAATTTTCTAAGCACTaGTGCTGTTACCAGACACTT +
Preference number: 4 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTEFSKH*CCYQTL
Trigger: AAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTGAATTTTCTAAGCACTaGTGCTGTTACCAGACACTT +
Preference number: 4 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIEFSKH*CCYQTL
Trigger: AAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGGAATATGTGTTGGGATaGCTCCACCATGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQEYVLG*LHHVSV
Trigger: AACAGAAACATGGTGGAGCCATCCCAACACATATTC...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGAGAATATGTGTTGGGATaGCTCCACCATGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGEYVLG*LHHVSV
Trigger: AACAGAAACATGGTGGAGCCATCCCAACACATATTC...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGAATATGTGTTGGGATaGCTCCACCATGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: QTLETDPLQSTVLSINHVEYVLG*LHHVSV
Trigger: AACAGAAACATGGTGGAGCCATCCCAACACATATTC...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTACTGGAGAAATGTTTCTaGAGGCACTCTTGGTTATCT +
Preference number: 4 (lower is better)
Translates to: QTLETDPLQSTVLSINHVLEKCF*RHSWLS
Trigger: AGATAACCAAGAGTGCCTCCAGAAACATTTCTCCAG...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR CCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGACTGGAGAAATGTTTCTaGAGGCACTCTTGGTTATCT +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGLEKCF*RHSWLS
Trigger: AGATAACCAAGAGTGCCTCCAGAAACATTTCTCCAG...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR GCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTGAGGAATTCACGGAATaGATTCCTTCCTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFEEFTE*IPSCWS
Trigger: ACTCCAGCAGGAAGGAATGCATTCCGTGAATTCCTC...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTATCACTAAAGGTGGCTaGAGTTTACATGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIITKGG*SLHGEY
Trigger: ATATTCACCATGTAAACTGCAGCCACCTTTAGTGAT...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATCACTAAAGGTGGCTaGAGTTTACATGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTITKGG*SLHGEY
Trigger: ATATTCACCATGTAAACTGCAGCCACCTTTAGTGAT...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGATGGCCACTGACAACATaGTACTGTTATTGTAAATGC +
Preference number: 4 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGWPLTT*YCYCKC
Trigger: GCATTTACAATAACAGTAGCATGTTGTCAGTGGCCA...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGAATTTTCTAAGCACTaGTGCTGTTACCAGACACTT +
Preference number: 4 (lower is better)
Translates to: QTLETDPLQSTVLSINHVEFSKH*CCYQTL
Trigger: AAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTTCAAACCGAGCTTGCTaGACAGAAGATGTCGTTGAG +
Preference number: 4 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFSNRAC*TEDVVE
Trigger: CTCAACGACATCTTCTGTCCAGCAAGCTCGGTTTGA...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTTTCTGGAGGCACTCTTaGTTATCTTGGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFFWRHS*LSWESW
Trigger: CCAGCTTTCCCAAGATAACCAAGAGTGCCTCCAGAA...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR TCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTAATTTGTCAAATGACTaGGCCCAGGCGTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFNLSND*AQALTS
Trigger: AGAAGTCAACGCCTGGGCTCAGTCATTTGACAAATT...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTTGTAGCCTTGGCCACTaGCAACATGCTACTGTTATT +
Preference number: 4 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFCSLGH*QHATVI
Trigger: AATAACAGTAGCATGTTGTCAGTGGCCAAGGCTACA...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR TCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTAATGGCACTGGTAAGTaGCGTATTCAAACCGAGCTT +
Preference number: 4 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFNGTGK*RIQTEL
Trigger: AAGCTCGGTTTGAATACGTCACTTACCAGTGCCATT...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGATCACTAAAGGTGGCTaGAGTTTACATGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQITKGG*SLHGEY
Trigger: ATATTCACCATGTAAACTGCAGCCACCTTTAGTGAT...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp AATCTGAAGTTGAGCATCATCGAATATGTGTTGGGATGGCTCCACCATGTTTCTTGGCCACTGACAACATaGTACTGTTATTGTAAATGC +
Preference number: 4 (lower is better)
Translates to: NLKLSIIEYVLGWLHHVSWPLTT*YCYCKC
Trigger: GCATTTACAATAACAGTAGCATGTTGTCAGTGGCCA...AGAAACATGGTGGAGCCATCCCAACACATATTCGATGATGCTCAACTTCAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GCTTGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGCAGTTACCAAACTCATaGAAAATAAAAGTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: ACWTEDVVEKHLNVFSLRQLPNS*KIKVVP
Trigger: GGGAACCACTTTTATTTTGCATGAGTTTGGTAACTG...CCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGCAGTTACCAAACTCATaGAAAATAAAAGTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQQLPNS*KIKVVP
Trigger: GGGAACCACTTTTATTTTGCATGAGTTTGGTAACTG...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTTCATCGAATATGTGTTaGGATGGCTCCACCATGTTT +
Preference number: 4 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFSSNMC*DGSTMF
Trigger: AAACATGGTGGAGCCATCCCAACACATATTCGATGA...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR GCA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTTGGCCACTGACAACATaGTACTGTTATTGTAAATGC +
Preference number: 4 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFWPLTT*YCYCKC
Trigger: GCATTTACAATAACAGTAGCATGTTGTCAGTGGCCA...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS GCA 90 bp CCGGGGAGGAAGCCCCGGCCGGCTCGCCTCCGTCCGCCGTGCGCATaGGTCCCGCGGGTGCCTTCTCAATATTGCAGCGCGGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: PGRKPRPARLRPPCA*VPRVPSQYCSAEGC
Trigger: GCAGCCCTCCGCGCTGCAATATTGAGAAGGCACCCGCGGGACGCATGCGCACGGCGGACGGAGGCGAGCCGGCCGGGGCTTCCTCCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS GCA 90 bp TGCCGGCCGGGGAGGAAGCCCCGGCCGGCTCGCCTCCGTCCGCCGTaGGCATGCGTCCCGCGGGTGCCTTCTCAATATTGCAGCGCGGAG +
Preference number: 5 (lower is better)
Translates to: CRPGRKPRPARLRPP*ACVPRVPSQYCSAE
Trigger: CTCCGCGCTGCAATATTGAGAAGGCACCCGCGGGACGCATGCGCACGGCGGACGGAGGCGAGCCGGCCGGGGCTTCCTCCCCGGCCGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS CCA 90 bp GTTGGACCCGCGACTCCCCGCTCCGGGCTGGCCTGGGGCGGCGCCTaGTGTGTCCTGGGCGGCGGGCATCTGCCGCTTCCGCATCTCCAT +
Preference number: 5 (lower is better)
Translates to: VGPATPRSGLAWGGA*CVLGGGHLPLPHLH
Trigger: ATGGAGATGCGGAAGCGGCAGATGCCCGCCGCCCAGGACACACCAGGCGCCGCCCCAGGCCAGCCCGGAGCGGGGAGTCGCGGGTCCAAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000518286.5
ENST00000523414.5
CDS GCA 90 bp CCCGGCCGGCTCGCCTCCGTCCGCCGTGCGCATGCGTCCCGCGGGTaGCTTCTCAATATTGCAGCGCGGAGGGCTGCCCTCTCTACGTCG +
Preference number: 5 (lower is better)
Translates to: PGRLASVRRAHASRG*LLNIAARRAALSTS
Trigger: CGACGTAGAGAGGGCAGCCCTCCGCGCTGCAATATTGAGAAGGCACCCGCGGGACGCATGCGCACGGCGGACGGAGGCGAGCCGGCCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS GCA 90 bp GGCTGGCCTGGGGCGGCGCCTGGTGTGTCCTGGGCGGCGGGCATCTaGCGCTTCCGCATCTCCATCCGCTCTGATCCCATCTGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: GWPGAAPGVSWAAGI*RFRISIRSDPIWSP
Trigger: TGGGCTCCAGATGGGATCAGAGCGGATGGAGATGCGGAAGCGGCAGATGCCCGCCGCCCAGGACACACCAGGCGCCGCCCCAGGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276500.4
CDS GCA 90 bp GGCTGGCCTGGGGCGGCGCCTGGTGTGTCCTGGGCGGCGGGCATCTaGCGCTTCCGCATCTCCATCCGCTCTGATCCCATCTGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: GWPGAAPGVSWAAGI*RFRISIRSDPICPD
Trigger: GTCAGGGCAGATGGGATCAGAGCGGATGGAGATGCGGAAGCGGCAGATGCCCGCCGCCCAGGACACACCAGGCGCCGCCCCAGGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523414.5
CDS GCA 90 bp GGCTGGCCTGGGGCGGCGCCTGGTGTGTCCTGGGCGGCGGGCATCTaGCGCTTCCGCATCTCCATCCGCTCTGATCCCATCTGCGGCATA +
Preference number: 5 (lower is better)
Translates to: GWPGAAPGVSWAAGI*RFRISIRSDPICGI
Trigger: TATGCCGCAGATGGGATCAGAGCGGATGGAGATGCGGAAGCGGCAGATGCCCGCCGCCCAGGACACACCAGGCGCCGCCCCAGGCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS GCA 90 bp CTCCGTCCGCCGTGCGCATGCGTCCCGCGGGTGCCTTCTCAATATTaGAGCGCGGAGGGCTGCCCTCTCTACGTCGGCGATTGCTCACCG +
Preference number: 5 (lower is better)
Translates to: LRPPCACVPRVPSQY*SAEGCPLYVGDCSP
Trigger: CGGTGAGCAATCGCCGACGTAGAGAGGGCAGCCCTCCGCGCTGCAATATTGAGAAGGCACCCGCGGGACGCATGCGCACGGCGGACGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS GCA 90 bp GGCTGGCCTGGGGCGGCGCCTGGTGTGTCCTGGGCGGCGGGCATCTaGCGCTTCCGCATCTCCATCCGCTCTGATCCCATCTGCTTGATA +
Preference number: 5 (lower is better)
Translates to: GWPGAAPGVSWAAGI*RFRISIRSDPICLI
Trigger: TATCAAGCAGATGGGATCAGAGCGGATGGAGATGCGGAAGCGGCAGATGCCCGCCGCCCAGGACACACCAGGCGCCGCCCCAGGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344277.10
CDS CCA 90 bp AACATCACGTCATTTCCTCCCTTGCCTGCCGAGAGGGCAGGGGAGTaGGAGAGCGAGCGCTGGGAGCAGGCGGAGGCGCGTTTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: NITSFPPLPAERAGE*ESERWEQAEARLGE
Trigger: CTCCCCCAAACGCGCCTCCGCCTGCTCCCAGCGCTCGCTCTCCCACTCCCCTGCCCTCTCGGCAGGCAAGGGAGGAAATGACGTGATGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518286.5
CDS GCA 90 bp GCATGCGTCCCGCGGGTGCCTTCTCAATATTGCAGCGCGGAGGGCTaGCCTCTCTACGTCGGCGATTGCTCACCGCGCCTTTCGCCTTTC +
Preference number: 5 (lower is better)
Translates to: ACVPRVPSQYCSAEG*PLYVGDCSPRLSPF
Trigger: GAAAGGCGAAAGGCGCGGTGAGCAATCGCCGACGTAGAGAGGGCAGCCCTCCGCGCTGCAATATTGAGAAGGCACCCGCGGGACGCATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS GCA 90 bp GGGAGCCTCGGGAGGGGGTCGCCGGAGAAGGTGAGAGAAGAACCTTaGGAGGCTGGAAAGCGGGCTAGAAAGGAGGCCGAACAGCTTCGG +
Preference number: 5 (lower is better)
Translates to: GSLGRGSPEKVREEP*EAGKRARKEAEQLR
Trigger: CCGAAGCTGTTCGGCCTCCTTTCTAGCCCGCTTTCCAGCCTCGCAAGGTTCTTCTCTCACCTTCTCCGGCGACCCCCTCCCGAGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS CCA 90 bp CGGGCTAGAAAGGAGGCCGAACAGCTTCGGGGCGGCGGGCGAGTCTaGGAGCTGTGCAGGCGGGAAGGACTTGATATCAGGAACAGCCCT +
Preference number: 5 (lower is better)
Translates to: RARKEAEQLRGGGRV*ELCRREGLDIRNSP
Trigger: AGGGCTGTTCCTGATATCAAGTCCTTCCCGCCTGCACAGCTCCCAGACTCGCCCGCCGCCCCGAAGCTGTTCGGCCTCCTTTCTAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS GCA 90 bp TCTCAATATTGCAGCGCGGAGGGCTGCCCTCTCTACGTCGGCGATTaGTCACCGCGCCTTTCGCCTTTCTCCGGCTCTCGGTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: SQYCSAEGCPLYVGD*SPRLSPFSGSRSLL
Trigger: GAGCAAAGACCGAGAGCCGGAGAAAGGCGAAAGGCGCGGTGAGCAATCGCCGACGTAGAGAGGGCAGCCCTCCGCGCTGCAATATTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS-3UTR CAA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGGGTGCCTTCTCAATATaGCAGCGCGGAGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SGQQGAFCVALATDNMLLGAFSI*QRGGLP
Trigger: GGGCAGCCCTCCGCGCTGCAATATTGAGAAGGCACC...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276500.4
ENST00000522225.5
CDS GCA 90 bp CATCCAGTTTGGCCTCATCTTCACTTGATTAGCCAGATGTGGTGGTaGATGCAAAGACCGAGCCCACCGTCCACCCTGCCGGCCGGGGAG +
Preference number: 5 (lower is better)
Translates to: HPVWPHLHLISQMWW*MQRPSPPSTLPAGE
Trigger: CTCCCCGGCCGGCAGGGTGGACGGTGGGCTCGGTCTTTGCATGCACCACCACATCTGGCTAATCAAGTGAAGATGAGGCCAAACTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS CCA 90 bp CGCCTTCATCCAGTTTGGCCTCATCTTCACTTGATTAGCCAGATGTaGTGGTGCATGCAAAGACCGAGCCCACCGTCCACCCTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: RLHPVWPHLHLISQM*WCMQRPSPPSTLPA
Trigger: GGCCGGCAGGGTGGACGGTGGGCTCGGTCTTTGCATGCACCACCACATCTGGCTAATCAAGTGAAGATGAGGCCAAACTGGATGAAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS-3UTR CAA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGGTTCGTGGGAAGCTATaGTGGGCCTCTGATCTTCCT +
Preference number: 5 (lower is better)
Translates to: SGQQGAFCVALATDNMLLVRGKL*WASDLP
Trigger: AGGAAGATCAGAGGCCCACAATAGCTTCCCACGAAC...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR CAA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGGGTGCCTTCTCAATATaGCAGCGCGGAGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVGAFSI*QRGGLP
Trigger: GGGCAGCCCTCCGCGCTGCAATATTGAGAAGGCACC...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276500.4
ENST00000522225.5
CDS-3UTR CAA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCCAGAAGCAGCATGCGTaGGACCCGCGACTCCCCGCT +
Preference number: 5 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSQKQHA*DPRLPA
Trigger: AGCGGGGAGTCGCGGGTCCAACGCATGCTGCTTCTG...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
CDS-3UTR CAA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTCTCTACGTCGGCGATaGCTCACCGCGCCTTTCGCC +
Preference number: 5 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSSLRRR*LTAPFA
Trigger: GGCGAAAGGCGCGGTGAGCAATCGCCGACGTAGAGA...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276500.4
ENST00000522225.5
CDS-3UTR CAA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACTCTCTACGTCGGCGATaGCTCACCGCGCCTTTCGCC +
Preference number: 5 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHSLRRR*LTAPFA
Trigger: GGCGAAAGGCGCGGTGAGCAATCGCCGACGTAGAGA...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276500.4
ENST00000522225.5
CDS TCA 90 bp TTGGATTTCAGGCCCGCCTTCATCCAGTTTGGCCTCATCTTCACTTaGTTAGCCAGATGTGGTGGTGCATGCAAAGACCGAGCCCACCGT +
Preference number: 5 (lower is better)
Translates to: LDFRPAFIQFGLIFT*LARCGGACKDRAHR
Trigger: ACGGTGGGCTCGGTCTTTGCATGCACCACCACATCTGGCTAATCAAGTGAAGATGAGGCCAAACTGGATGAAGGCGGGCCTGAAATCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS-3UTR CAA 90 bp TTCCCAGGTTGGAAGATCTGCTCTGAGTTCGTGGGAAGCTATTGTGGGCCTCTGGTTCGTGGGAAGCTATaGTGGGCCTCTGATCTTCCT +
Preference number: 5 (lower is better)
Translates to: FPGWKICSEFVGSYCGPLVRGKL*WASDLP
Trigger: AGGAAGATCAGAGGCCCACAATAGCTTCCCACGAAC...CAGAGGCCCACAATAGCTTCCCACGAACTCAGAGCAGATCTTCCAACCTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517659.5
CDS-3UTR CAA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGATCATCGAATATGTGTaGGGATGGCTCCACCATGTT +
Preference number: 5 (lower is better)
Translates to: SGQQGAFCVALATDNMLLIIEYV*GWLHHV
Trigger: AACATGGTGGAGCCATCCCAACACATATTCGATGAT...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGAGTTCGTGGGAAGCTATaGTGGGCCTCTGATCTTCCT +
Preference number: 5 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRVRGKL*WASDLP
Trigger: AGGAAGATCAGAGGCCCACAATAGCTTCCCACGAAC...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR CAA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTGGTGAGAGAAGAACCTaGCGAGGCTGGAAAGCGGGC +
Preference number: 5 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIGERRT*RGWKAG
Trigger: GCCCGCTTTCCAGCCTCGCAAGGTTCTTCTCTCACC...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS CCA 90 bp TCTCTGTCTTCTTTGCCACTTGCCCTTCTTCCCTCTATGACTGCCTaGGTCTTTGAAGCTCTCCCTCCTTATAAGGTCACCAGTCGTTGG +
Preference number: 5 (lower is better)
Translates to: SLSSLPLALLPSMTA*VFEALPPYKVTSRW
Trigger: CCAACGACTGGTGACCTTATAAGGAGGGAGAGCTTCAAAGACCCAGGCAGTCATAGAGGGAAGAAGGGCAAGTGGCAAAGAAGACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS-3UTR CAA 90 bp TCCGGGCAGCAGGGAGCCTTCTGTGTAGCCTTGGCCACTGACAACATGCTACTGGGTGTAAATCTGAAGTaGAGCATCATCGAATATGTG +
Preference number: 5 (lower is better)
Translates to: SGQQGAFCVALATDNMLLGVNLK*SIIEYV
Trigger: CACATATTCGATGATGCTCAACTTCAGATTTACACC...CAGTAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGCTCCCTGCTGCCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp AAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGGCCTTCTGTGTAGCCTaGGCCACTGACAACATGCTA +
Preference number: 5 (lower is better)
Translates to: KHCCCYQTLETDPLQSTVAFCVA*ATDNML
Trigger: TAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGC...CACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTGCAGGCGGGAAGGACTaGATATCAGGAACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIAGGKD*ISGTAL
Trigger: CAGGGCTGTTCCTGATATCAAGTCCTTCCCGCCTGC...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS CCA 90 bp ATAAGGTCACCAGTCGTTGGATTTCAGGCCCGCCTTCATCCAGTTTaGCCTCATCTTCACTTGATTAGCCAGATGTGGTGGTGCATGCAA +
Preference number: 5 (lower is better)
Translates to: IRSPVVGFQARLHPV*PHLHLISQMWWCMQ
Trigger: TTGCATGCACCACCACATCTGGCTAATCAAGTGAAGATGAGGCCAAACTGGATGAAGGCGGGCCTGAAATCCAACGACTGGTGACCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS-3UTR CAA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACGTTCGTGGGAAGCTATaGTGGGCCTCTGATCTTCCT +
Preference number: 5 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHVRGKL*WASDLP
Trigger: AGGAAGATCAGAGGCCCACAATAGCTTCCCACGAAC...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR CAA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGATTTCTGGAGGCACTCTaGGTTATCTTGGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRFLEAL*VILGKL
Trigger: CAGCTTTCCCAAGATAACCAAGAGTGCCTCCAGAAA...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS TCA 90 bp AAACCCAATCTCTGTCTTCTTTGCCACTTGCCCTTCTTCCCTCTATaGCTGCCTGGGTCTTTGAAGCTCTCCCTCCTTATAAGGTCACCA +
Preference number: 5 (lower is better)
Translates to: KPNLCLLCHLPFFPL*LPGSLKLSLLIRSP
Trigger: TGGTGACCTTATAAGGAGGGAGAGCTTCAAAGACCCAGGCAGTCATAGAGGGAAGAAGGGCAAGTGGCAAAGAAGACAGAGATTGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS-3UTR CAA 90 bp GGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCTTGCTGGACAGAATCATCGAATATGTGTaGGGATGGCTCCACCATGTT +
Preference number: 5 (lower is better)
Translates to: GPAMALVSDVFKPSLLDRIIEYV*GWLHHV
Trigger: AACATGGTGGAGCCATCCCAACACATATTCGATGAT...TCTGTCCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp GATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGGAGTCTAAGCTCATCATCGAATATGTGTaGGGATGGCTCCACCATGTT +
Preference number: 5 (lower is better)
Translates to: DGSTMFLLITSLTRESKLIIEYV*GWLHHV
Trigger: AACATGGTGGAGCCATCCCAACACATATTCGATGAT...GAGCTTAGACTCCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS TCA 90 bp AATGCATTCCTTCCTGCTGGAGTGACCATTAATTTGTCAAATGACTaGGCCCAGGCGTTGACTTCTTCCAGAGTAGGAGCAGGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: NAFLPAGVTINLSND*AQALTSSRVGAGLD
Trigger: ATCAAGCCCTGCTCCTACTCTGGAAGAAGTCAACGCCTGGGCTCAGTCATTTGACAAATTAATGGTCACTCCAGCAGGAAGGAATGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523280.1
CDS-3UTR CAA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGCCTTCTGTGTAGCCTaGGCCACTGACAACATGCTA +
Preference number: 5 (lower is better)
Translates to: QTLETDPLQSTVLSINHVAFCVA*ATDNML
Trigger: TAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGC...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCGTATTCAAACCGAGCTaGCTGGACAGAAGATGTCGT +
Preference number: 5 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSVFKPS*LDRRCR
Trigger: ACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATAC...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp TGCTGTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTGCACTCTTGGTTATCTaGGGAAAGCTGGGGCATGTT +
Preference number: 5 (lower is better)
Translates to: CCYQTLETDPLQSTVLSIALLVI*GKLGHV
Trigger: AACATGCCCCAGCTTTCCCAAGATAACCAAGAGTGC...AATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS-3UTR CAA 90 bp AATATGTGTTGGGATGGCTCCACCATGTTTCTGTTGATCACTTCTCTCACCCGGTTTCTGGAGGCACTCTaGGTTATCTTGGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: NMCWDGSTMFLLITSLTRFLEAL*VILGKL
Trigger: CAGCTTTCCCAAGATAACCAAGAGTGCCTCCAGAAA...CCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATCCCAACACATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517659.5
ENST00000523280.1
CDS-3UTR CAA 90 bp ACTGTGAATTTGGGTCCTGCAATGGCACTGGTAAGTGACGTATTCAAACCGAGCATCATCGAATATGTGTaGGGATGGCTCCACCATGTT +
Preference number: 5 (lower is better)
Translates to: TVNLGPAMALVSDVFKPSIIEYV*GWLHHV
Trigger: AACATGGTGGAGCCATCCCAACACATATTCGATGAT...GCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCCAAATTCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCTTTCTGGAGGCACTCTaGGTTATCTTGGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTFLEAL*VILGKL
Trigger: CAGCTTTCCCAAGATAACCAAGAGTGCCTCCAGAAA...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS-3UTR CAA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGTCTGATCCCATCTGCTaGATATCAGGAACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQSDPIC*ISGTAL
Trigger: CAGGGCTGTTCCTGATATCAAGCAGATGGGATCAGA...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344277.10
CDS-3UTR CAA 90 bp GAATTTTCTAAGCACTGCTGCTGTTACCAGACACTTGAGACTGATCCACTTCAGGTATTCAAACCGAGCTaGCTGGACAGAAGATGTCGT +
Preference number: 5 (lower is better)
Translates to: EFSKHCCCYQTLETDPLQVFKPS*LDRRCR
Trigger: ACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATAC...CTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGCAGCAGTGCTTAGAAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGCTGTTACCAGACACTaGAGACTGATCCACTTCAGA +
Preference number: 5 (lower is better)
Translates to: QTLETDPLQSTVLSINHVAVTRH*RLIHFR
Trigger: TCTGAAGTGGATCAGTCTCAAGTGTCTGGTAACAGC...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTGTTCGTGGGAAGCTATaGTGGGCCTCTGATCTTCCT +
Preference number: 5 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFVRGKL*WASDLP
Trigger: AGGAAGATCAGAGGCCCACAATAGCTTCCCACGAAC...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
CDS-3UTR CAA 90 bp TGCTGGACAGAAGATGTCGTTGAGAAACACCTGAATGTCTTTTCTTTGAGGGGAATCATCGAATATGTGTaGGGATGGCTCCACCATGTT +
Preference number: 5 (lower is better)
Translates to: CWTEDVVEKHLNVFSLRGIIEYV*GWLHHV
Trigger: AACATGGTGGAGCCATCCCAACACATATTCGATGAT...TCCCCTCAAAGAAAAGACATTCAGGTGTTTCTCAACGACATCTTCTGTCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp GATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGACATCCACACGCACGGTGTAAATCTGAAGTaGAGCATCATCGAATATGTG +
Preference number: 5 (lower is better)
Translates to: DPLQSTVLSINHVDIHTHGVNLK*SIIEYV
Trigger: CACATATTCGATGATGCTCAACTTCAGATTTACACC...GTGCGTGTGGATGTCTACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTGCCTTCTGTGTAGCCTaGGCCACTGACAACATGCTA +
Preference number: 5 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFAFCVA*ATDNML
Trigger: TAGCATGTTGTCAGTGGCCAAGGCTACACAGAAGGC...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp GTTACCAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCGGTGTAAATCTGAAGTaGAGCATCATCGAATATGTG +
Preference number: 5 (lower is better)
Translates to: VTRHLRLIHFRAQCFPLTGVNLK*SIIEYV
Trigger: CACATATTCGATGATGCTCAACTTCAGATTTACACC...GGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTGGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp CAGACACTTGAGACTGATCCACTTCAGAGCACAGTGCTTTCCATTAACCATGTAGGTGTAAATCTGAAGTaGAGCATCATCGAATATGTG +
Preference number: 5 (lower is better)
Translates to: QTLETDPLQSTVLSINHVGVNLK*SIIEYV
Trigger: CACATATTCGATGATGCTCAACTTCAGATTTACACC...TACATGGTTAATGGAAAGCACTGTGCTCTGAAGTGGATCAGTCTCAAGTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS-3UTR CAA 90 bp CCTTGGCCACTGACAACATGCTACTGTTATTGTAAATGCAAATACGCTATCTTTGTATTCAAACCGAGCTaGCTGGACAGAAGATGTCGT +
Preference number: 5 (lower is better)
Translates to: PWPLTTCYCYCKCKYAIFVFKPS*LDRRCR
Trigger: ACGACATCTTCTGTCCAGCAAGCTCGGTTTGAATAC...AAAGATAGCGTATTTGCATTTACAATAACAGTAGCATGTTGTCAGTGGCCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000522225.5
ENST00000523280.1
CDS CCA 72 bp GCGACTCCCCGCTCCGGGCTGGCCTGGGGCGGCGCCTaGTGTGTCCTGGGCGGCGGGCATCTGCCGCTTCCG +
Preference number: 6 (lower is better)
Translates to: ATPRSGLAWGGA*CVLGGGHLPLP
Trigger: CGGAAGCGGCAGATGCCCGCCGCCCAGGACACACCAGGCGCCGCCCCAGGCCAGCCCGGAGCGGGGAGTCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000518286.5
ENST00000523414.5
CDS CCA 72 bp GCTCCGGGCTGGCCTGGGGCGGCGCCTGGTGTGTCCTaGGCGGCGGGCATCTGCCGCTTCCGCATCTCCATC +
Preference number: 6 (lower is better)
Translates to: APGWPGAAPGVS*AAGICRFRISI
Trigger: GATGGAGATGCGGAAGCGGCAGATGCCCGCCGCCCAGGACACACCAGGCGCCGCCCCAGGCCAGCCCGGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000518286.5
ENST00000523414.5
CDS GCA 72 bp AAGCCCCGGCCGGCTCGCCTCCGTCCGCCGTGCGCATaGGTCCCGCGGGTGCCTTCTCAATATTGCAGCGCG +
Preference number: 6 (lower is better)
Translates to: KPRPARLRPPCA*VPRVPSQYCSA
Trigger: CGCGCTGCAATATTGAGAAGGCACCCGCGGGACGCATGCGCACGGCGGACGGAGGCGAGCCGGCCGGGGCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS GCA 72 bp GGGAGGAAGCCCCGGCCGGCTCGCCTCCGTCCGCCGTaGGCATGCGTCCCGCGGGTGCCTTCTCAATATTGC +
Preference number: 6 (lower is better)
Translates to: GRKPRPARLRPP*ACVPRVPSQYC
Trigger: GCAATATTGAGAAGGCACCCGCGGGACGCATGCGCACGGCGGACGGAGGCGAGCCGGCCGGGGCTTCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS GCA 72 bp CTCGCCTCCGTCCGCCGTGCGCATGCGTCCCGCGGGTaGCTTCTCAATATTGCAGCGCGGAGGGCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: LASVRRAHASRG*LLNIAARRAAL
Trigger: GAGGGCAGCCCTCCGCGCTGCAATATTGAGAAGGCACCCGCGGGACGCATGCGCACGGCGGACGGAGGCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS GCA 72 bp GGGGCGGCGCCTGGTGTGTCCTGGGCGGCGGGCATCTaGCGCTTCCGCATCTCCATCCGCTCTGATCCCATC +
Preference number: 6 (lower is better)
Translates to: GAAPGVSWAAGI*RFRISIRSDPI
Trigger: GATGGGATCAGAGCGGATGGAGATGCGGAAGCGGCAGATGCCCGCCGCCCAGGACACACCAGGCGCCGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276500.4
ENST00000297313.8
ENST00000344277.10
ENST00000518286.5
ENST00000523414.5
CDS TCA 72 bp GGCGGGCATCTGCCGCTTCCGCATCTCCATCCGCTCTaGTCCCATCTGGAGCCCACCGTCCACCCTGCCGGC +
Preference number: 6 (lower is better)
Translates to: GGHLPLPHLHPL*SHLEPTVHPAG
Trigger: GCCGGCAGGGTGGACGGTGGGCTCCAGATGGGATCAGAGCGGATGGAGATGCGGAAGCGGCAGATGCCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276500.4
CDS CAA 90 bp CCTCCGTCCGCCGTGCGCATGCGTCCCGCGGGTGCCTTCTCAATATaGCAGCGCGGAGGGCTGCCCTCTCTACGTCGGCGATTGCTCACC +
Preference number: 6 (lower is better)
Translates to: PPSAVRMRPAGAFSI*QRGGLPSLRRRLLT
Trigger: GGTGAGCAATCGCCGACGTAGAGAGGGCAGCCCTCCGCGCTGCAATATTGAGAAGGCACCCGCGGGACGCATGCGCACGGCGGACGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS GCA 72 bp TGCAGCGCGGAGGGCTGCCCTCTCTACGTCGGCGATTaGTCACCGCGCCTTTCGCCTTTCTCCGGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: CSAEGCPLYVGD*SPRLSPFSGSR
Trigger: CCGAGAGCCGGAGAAAGGCGAAAGGCGCGGTGAGCAATCGCCGACGTAGAGAGGGCAGCCCTCCGCGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS CAA 72 bp GCCGTGCGCATGCGTCCCGCGGGTGCCTTCTCAATATaGCAGCGCGGAGGGCTGCCCTCTCTACGTCGGCGA +
Preference number: 6 (lower is better)
Translates to: AVRMRPAGAFSI*QRGGLPSLRRR
Trigger: TCGCCGACGTAGAGAGGGCAGCCCTCCGCGCTGCAATATTGAGAAGGCACCCGCGGGACGCATGCGCACGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS TCA 72 bp CTCCGGGGAGCCTCGGGAGGGGGTCGCCGGAGAAGGTaGGAGAAGAACCTTGCGAGGCTGGAAAGCGGGCTA +
Preference number: 6 (lower is better)
Translates to: LRGASGGGRRRR*EKNLARLESGL
Trigger: TAGCCCGCTTTCCAGCCTCGCAAGGTTCTTCTCTCACCTTCTCCGGCGACCCCCTCCCGAGGCTCCCCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS GCA 72 bp CCGTGCGCATGCGTCCCGCGGGTGCCTTCTCAATATTaGAGCGCGGAGGGCTGCCCTCTCTACGTCGGCGAT +
Preference number: 6 (lower is better)
Translates to: PCACVPRVPSQY*SAEGCPLYVGD
Trigger: ATCGCCGACGTAGAGAGGGCAGCCCTCCGCGCTGCAATATTGAGAAGGCACCCGCGGGACGCATGCGCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS CAA 72 bp TTGCAGCGCGGAGGGCTGCCCTCTCTACGTCGGCGATaGCTCACCGCGCCTTTCGCCTTTCTCCGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: LQRGGLPSLRRR*LTAPFAFLRLS
Trigger: CGAGAGCCGGAGAAAGGCGAAAGGCGCGGTGAGCAATCGCCGACGTAGAGAGGGCAGCCCTCCGCGCTGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS GCA 72 bp CCGCGGGTGCCTTCTCAATATTGCAGCGCGGAGGGCTaGCCTCTCTACGTCGGCGATTGCTCACCGCGCCTT +
Preference number: 6 (lower is better)
Translates to: PRVPSQYCSAEG*PLYVGDCSPRL
Trigger: AAGGCGCGGTGAGCAATCGCCGACGTAGAGAGGGCAGCCCTCCGCGCTGCAATATTGAGAAGGCACCCGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS CCA 72 bp AAGGAGGCCGAACAGCTTCGGGGCGGCGGGCGAGTCTaGGAGCTGTGCAGGCGGGAAGGACTTGATATCAGG +
Preference number: 6 (lower is better)
Translates to: KEAEQLRGGGRV*ELCRREGLDIR
Trigger: CCTGATATCAAGTCCTTCCCGCCTGCACAGCTCCCAGACTCGCCCGCCGCCCCGAAGCTGTTCGGCCTCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS GCA 72 bp ATCCGCTCTGATCCCATCTGCGGCATAGGCGAGCTCTaGCCAGCGGTGGCGTCTTCTTCCCTGGGCTTGGCT +
Preference number: 6 (lower is better)
Translates to: IRSDPICGIGEL*PAVASSSLGLA
Trigger: AGCCAAGCCCAGGGAAGAAGACGCCACCGCTGGGCAGAGCTCGCCTATGCCGCAGATGGGATCAGAGCGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS GCA 72 bp CACCGCGCCTTTCGCCTTTCTCCGGCTCTCGGTCTTTaGTCTAGCCCTCTTCTCCCGGCCTCTTCCTCCCCT +
Preference number: 6 (lower is better)
Translates to: HRAFRLSPALGL*SSPLLPASSSP
Trigger: AGGGGAGGAAGAGGCCGGGAGAAGAGGGCTAGAGCAAAGACCGAGAGCCGGAGAAAGGCGAAAGGCGCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522225.5
CDS CAA 90 bp TTCTCAATATTGCAGCGCGGAGGGCTGCCCTCTCTACGTCGGCGATaGCTCACCGCGCCTTTCGCCTTTCTCCGGCTCTCGGTCTTTGCT +
Preference number: 6 (lower is better)
Translates to: FSILQRGGLPSLRRR*LTAPFAFLRLSVFA
Trigger: AGCAAAGACCGAGAGCCGGAGAAAGGCGAAAGGCGCGGTGAGCAATCGCCGACGTAGAGAGGGCAGCCCTCCGCGCTGCAATATTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276500.4
ENST00000522225.5
ENST00000523064.1
CDS TCA 72 bp GGCGGGCATCTGCCGCTTCCGCATCTCCATCCGCTCTaGTCCCATCTGCTTGATATCAGGAACAGCCCTGAG +
Preference number: 6 (lower is better)
Translates to: GGHLPLPHLHPL*SHLLDIRNSPE
Trigger: CTCAGGGCTGTTCCTGATATCAAGCAGATGGGATCAGAGCGGATGGAGATGCGGAAGCGGCAGATGCCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344277.10
CDS GCA 72 bp TGGCCTCATCTTCACTTGATTAGCCAGATGTGGTGGTaGATGCAAAGACCGAGCCCACCGTCCACCCTGCCG +
Preference number: 6 (lower is better)
Translates to: WPHLHLISQMWW*MQRPSPPSTLP
Trigger: CGGCAGGGTGGACGGTGGGCTCGGTCTTTGCATGCACCACCACATCTGGCTAATCAAGTGAAGATGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS CCA 72 bp GTTTGGCCTCATCTTCACTTGATTAGCCAGATGTGGTaGTGCATGCAAAGACCGAGCCCACCGTCCACCCTG +
Preference number: 6 (lower is better)
Translates to: VWPHLHLISQMW*CMQRPSPPSTL
Trigger: CAGGGTGGACGGTGGGCTCGGTCTTTGCATGCACCACCACATCTGGCTAATCAAGTGAAGATGAGGCCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS CCA 72 bp CCAGTTTGGCCTCATCTTCACTTGATTAGCCAGATGTaGTGGTGCATGCAAAGACCGAGCCCACCGTCCACC +
Preference number: 6 (lower is better)
Translates to: PVWPHLHLISQM*WCMQRPSPPST
Trigger: GGTGGACGGTGGGCTCGGTCTTTGCATGCACCACCACATCTGGCTAATCAAGTGAAGATGAGGCCAAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS CAA 90 bp GTTGGATTTCAGGCCCGCCTTCATCCAGTTTGGCCTCATCTTCACTaGATTAGCCAGATGTGGTGGTGCATGCAAAGACCGAGCCCACCG +
Preference number: 6 (lower is better)
Translates to: VGFQARLHPVWPHLH*ISQMWWCMQRPSPP
Trigger: CGGTGGGCTCGGTCTTTGCATGCACCACCACATCTGGCTAATCAAGTGAAGATGAGGCCAAACTGGATGAAGGCGGGCCTGAAATCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS CCA 72 bp GGGAGGATTCTTCCTTGCCTCTTCTGGCAGCCTCGGTaGCAACAGAAACCCAATCTCTGTCTTCTTTGCCAC +
Preference number: 6 (lower is better)
Translates to: GRILPCLFWQPR*QQKPNLCLLCH
Trigger: GTGGCAAAGAAGACAGAGATTGGGTTTCTGTTGCCACCGAGGCTGCCAGAAGAGGCAAGGAAGAATCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS CAA 72 bp CAGGCCCGCCTTCATCCAGTTTGGCCTCATCTTCACTaGATTAGCCAGATGTGGTGGTGCATGCAAAGACCG +
Preference number: 6 (lower is better)
Translates to: QARLHPVWPHLH*ISQMWWCMQRP
Trigger: CGGTCTTTGCATGCACCACCACATCTGGCTAATCAAGTGAAGATGAGGCCAAACTGGATGAAGGCGGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS TCA 72 bp AGGCCCGCCTTCATCCAGTTTGGCCTCATCTTCACTTaGTTAGCCAGATGTGGTGGTGCATGCAAAGACCGA +
Preference number: 6 (lower is better)
Translates to: RPAFIQFGLIFT*LARCGGACKDR
Trigger: TCGGTCTTTGCATGCACCACCACATCTGGCTAATCAAGTGAAGATGAGGCCAAACTGGATGAAGGCGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS CCA 72 bp CCAGTCGTTGGATTTCAGGCCCGCCTTCATCCAGTTTaGCCTCATCTTCACTTGATTAGCCAGATGTGGTGG +
Preference number: 6 (lower is better)
Translates to: PVVGFQARLHPV*PHLHLISQMWW
Trigger: CCACCACATCTGGCTAATCAAGTGAAGATGAGGCCAAACTGGATGAAGGCGGGCCTGAAATCCAACGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523064.1
CDS CCA 72 bp AACTGTGTCCATATAGACGGCCTGGAGAAATGTTTCTaGAGGCACTCTTGGTTATCTTGGGAAAGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: NCVHIDGLEKCF*RHSWLSWESWG
Trigger: GCCCCAGCTTTCCCAAGATAACCAAGAGTGCCTCCAGAAACATTTCTCCAGGCCGTCTATATGGACACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1
CDS CAA 90 bp CTGTGTCCATATAGACGGCCTGGAGAAATGTTTCTGGAGGCACTCTaGGTTATCTTGGGAAAGCTGGGGCATGTTTTCACAATAAAGGCC +
Preference number: 6 (lower is better)
Translates to: LCPYRRPGEMFLEAL*VILGKLGHVFTIKA
Trigger: GGCCTTTATTGTGAAAACATGCCCCAGCTTTCCCAAGATAACCAAGAGTGCCTCCAGAAACATTTCTCCAGGCCGTCTATATGGACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS CCA 72 bp ATAGACGGCCTGGAGAAATGTTTCTGGAGGCACTCTTaGTTATCTTGGGAAAGCTGGGGCATGTTTTCACAA +
Preference number: 6 (lower is better)
Translates to: IDGLEKCFWRHS*LSWESWGMFSQ
Trigger: TTGTGAAAACATGCCCCAGCTTTCCCAAGATAACCAAGAGTGCCTCCAGAAACATTTCTCCAGGCCGTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS CAA 72 bp TATAGACGGCCTGGAGAAATGTTTCTGGAGGCACTCTaGGTTATCTTGGGAAAGCTGGGGCATGTTTTCACA +
Preference number: 6 (lower is better)
Translates to: YRRPGEMFLEAL*VILGKLGHVFT
Trigger: TGTGAAAACATGCCCCAGCTTTCCCAAGATAACCAAGAGTGCCTCCAGAAACATTTCTCCAGGCCGTCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297313.8
CDS CAA 90 bp CTTGATATCAGGAACAGCCCTGAGGTCTCCTTCATTTTCTGTGATTaGGTGAATGTCTGTATTATATCTCTGAGCCCTGAACAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: LDIRNSPEVSFIFCD*VNVCIISLSPEQGQ
Trigger: CTGCCCCTGTTCAGGGCTCAGAGATATAATACAGACATTCACCAAATCACAGAAAATGAAGGAGACCTCAGGGCTGTTCCTGATATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297313.8
ENST00000344277.10
ENST00000517659.5
ENST00000523280.1