Pregenerated sensors for RGS2 (Homo sapiens)
Ensembl gene IDs: ENSG00000116741Ensembl transcript IDs: ENST00000235382.7, ENST00000464302.1, ENST00000483295.1, ENST00000487236.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTTTTCAGAGTGAGACACCACGTTCAGACCACCTATTCCCTTCTTaGGTTCTGTACACAGTGAGGGAAGCTGTTCTGATACCAGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: AFQSETPRSDHLFPS*VLYTVREAVLIPAS Trigger: AGAAGCTGGTATCAGAACAGCTTCCCTCACTGTGTACAGAACGCAAGAAGGGAATAGGTGGTCTGAACGTGGTGTCTCACTCTGAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| 3UTR TCA 90 bp | GATTCACTACCCAACTTTGAATCAATAGTTCTGAGTGATGTTTCCTaGACACCCAGGCTGAATTCAAGGTCAGTCTTTATGGCAGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: DSLPNFESIVLSDVS*TPRLNSRSVFMAGH Trigger: GTGACCTGCCATAAAGACTGACCTTGAATTCAGCCTGGGTGTTCAGGAAACATCACTCAGAACTATTGATTCAAAGTTGGGTAGTGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| 3UTR-3UTR TCA 90 bp | ATTCCTGCTTTTCAGAGTGAGACACCACGTTCAGACCACCTATTCCCTTCTTGCATCAATAGTTCTGAGTaGTGTTTCCTGAACACCCAG | + |
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Preference number: 2 (lower is better) Translates to: IPAFQSETPRSDHLFPSCINSSE*CFLNTQ Trigger: CTGGGTGTTCAGGAAACATCACTCAGAACTATTGAT...GCAAGAAGGGAATAGGTGGTCTGAACGTGGTGTCTCACTCTGAAAAGCAGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTCCTGATTCACTACCCAACTTTGAATCAATAGTTCTGAGTGATGTTTCCCCTCAGGAAAAAGAATaGAATGTCCTCCATTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: WLPDSLPNFESIVLSDVSPQEKE*NVLHFW Trigger: CCAGAAATGGAGGACATTTCATTCTTTTTCCTGAGG...GGAAACATCACTCAGAACTATTGATTCAAAGTTGGGTAGTGAATCAGGAAGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| 3UTR TCA 72 bp | CCCAACTTTGAATCAATAGTTCTGAGTGATGTTTCCTaGACACCCAGGCTGAATTCAAGGTCAGTCTTTATG | + |
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Preference number: 3 (lower is better) Translates to: PNFESIVLSDVS*TPRLNSRSVFM Trigger: CATAAAGACTGACCTTGAATTCAGCCTGGGTGTTCAGGAAACATCACTCAGAACTATTGATTCAAAGTTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR GCA 90 bp | ATTCCTGCTTTTCAGAGTGAGACACCACGTTCAGACCACCTATTCCCTTCTTGCCTTGTGGCCACTGCCTaGGCTCTTGTCCATGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: IPAFQSETPRSDHLFPSCLVATA*ALVHGS Trigger: AGACCCATGGACAAGAGCGCAGGCAGTGGCCACAAG...GCAAGAAGGGAATAGGTGGTCTGAACGTGGTGTCTCACTCTGAAAAGCAGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR GCA 90 bp | TTCAAGGTCAGTCTTTATGGCAGGTCACAGTCCTTCCCCTCAGGAAAAAGAATGCGCTCTTGTGGCCACTaGCTGCGCTCTTGTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: FKVSLYGRSQSFPSGKRMRSCGH*LRSCPW Trigger: CCATGGACAAGAGCGCAGGCAGTGGCCACAAGAGCG...CATTCTTTTTCCTGAGGGGAAGGACTGTGACCTGCCATAAAGACTGACCTTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR TCA 90 bp | ACCACGTTCAGACCACCTATTCCCTTCTTGCGTTCTGTACACAGTGAGGGAAGCGGTCTGCAGTCGTGTTaGACAGCCAAGAACATAGCA | + |
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Preference number: 4 (lower is better) Translates to: TTFRPPIPFLRSVHSEGSGLQSC*TAKNIA Trigger: TGCTATGTTCTTGGCTGTTCAACACGACTGCAGACC...GCTTCCCTCACTGTGTACAGAACGCAAGAAGGGAATAGGTGGTCTGAACGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR GCA 90 bp | ACCACGTTCAGACCACCTATTCCCTTCTTGCGTTCTGTACACAGTGAGGGAAGCTCTTGTCCATGGGTCTaGAGTCGTGTTGAACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TTFRPPIPFLRSVHSEGSSCPWV*SRVEQP Trigger: TGGCTGTTCAACACGACTGCAGACCCATGGACAAGA...GCTTCCCTCACTGTGTACAGAACGCAAGAAGGGAATAGGTGGTCTGAACGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR CCA 90 bp | TTTCAGAGTGAGACACCACGTTCAGACCACCTATTCCCTTCTTGCGTTCTGTACCTGCGCTCTTGTCCATaGGTCTGCAGTCGTGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: FQSETPRSDHLFPSCVLYLRSCP*VCSRVE Trigger: TTCAACACGACTGCAGACCCATGGACAAGAGCGCAG...GTACAGAACGCAAGAAGGGAATAGGTGGTCTGAACGTGGTGTCTCACTCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR TCA 90 bp | ATTCCTGCTTTTCAGAGTGAGACACCACGTTCAGACCACCTATTCCCTTCTTGCTCCTGCTTTTCAGAGTaGGACACCACGTTCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: IPAFQSETPRSDHLFPSCSCFSE*DTTFRP Trigger: TGGTCTGAACGTGGTGTCTCACTCTGAAAAGCAGGA...GCAAGAAGGGAATAGGTGGTCTGAACGTGGTGTCTCACTCTGAAAAGCAGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR CCA 90 bp | ACCACGTTCAGACCACCTATTCCCTTCTTGCGTTCTGTACACAGTGAGGGAAGCCAAGACCATATTTGCTaGCTAGCAGCTCGTCAAATG | + |
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Preference number: 4 (lower is better) Translates to: TTFRPPIPFLRSVHSEGSQDHIC*LAARQM Trigger: CATTTGACGAGCTGCTAGCCAGCAAATATGGTCTTG...GCTTCCCTCACTGTGTACAGAACGCAAGAAGGGAATAGGTGGTCTGAACGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR TCA 90 bp | ACCACGTTCAGACCACCTATTCCCTTCTTGCGTTCTGTACACAGTGAGGGAAGCACATTTCATGTAGCATaGGGCTCTGTGGTGATTTGT | + |
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Preference number: 4 (lower is better) Translates to: TTFRPPIPFLRSVHSEGSTFHVA*GSVVIC Trigger: ACAAATCACCACAGAGCCTCATGCTACATGAAATGT...GCTTCCCTCACTGTGTACAGAACGCAAGAAGGGAATAGGTGGTCTGAACGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR TCA 90 bp | ATTCCTGCTTTTCAGAGTGAGACACCACGTTCAGACCACCTATTCCCTTCTTGCCTGAGTGATGTTTCCTaGACACCCAGGCTGAATTCA | + |
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Preference number: 4 (lower is better) Translates to: IPAFQSETPRSDHLFPSCLSDVS*TPRLNS Trigger: TGAATTCAGCCTGGGTGTTCAGGAAACATCACTCAG...GCAAGAAGGGAATAGGTGGTCTGAACGTGGTGTCTCACTCTGAAAAGCAGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR TCA 90 bp | GCTGAATTCAAGGTCAGTCTTTATGGCAGGTCACAGTCCTTCCCCTCAGGAAAAGTCCTGGTAGAATTCTaGCTCCAAGAAACGAGGATA | + |
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Preference number: 4 (lower is better) Translates to: AEFKVSLYGRSQSFPSGKVLVEF*LQETRI Trigger: TATCCTCGTTTCTTGGAGTCAGAATTCTACCAGGAC...TTTTCCTGAGGGGAAGGACTGTGACCTGCCATAAAGACTGACCTTGAATTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR CCA 90 bp | CTGAACACCCAGGCTGAATTCAAGGTCAGTCTTTATGGCAGGTCACAGTCCTTCCTCTGTGGTGATTTGTaGCTTTTTACACAAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LNTQAEFKVSLYGRSQSFLCGDL*LFTQVL Trigger: CAGGACTTGTGTAAAAAGCCACAAATCACCACAGAG...GAAGGACTGTGACCTGCCATAAAGACTGACCTTGAATTCAGCCTGGGTGTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR CCA 90 bp | TTATGGCAGGTCACAGTCCTTCCCCTCAGGAAAAAGAATGAAATGTCCTCCATTCAAGGTCAGTCTTTATaGCAGGTCACAGTCCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LWQVTVLPLRKKNEMSSIQGQSL*QVTVLP Trigger: GGGAAGGACTGTGACCTGCCATAAAGACTGACCTTG...AATGGAGGACATTTCATTCTTTTTCCTGAGGGGAAGGACTGTGACCTGCCATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR CCA 90 bp | ACATTCCTGCTTTTCAGAGTGAGACACCACGTTCAGACCACCTATTCCCTTCTTCTCCTAGTCAGTTACTaGCTTCCTGATTCACTACCC | + |
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Preference number: 4 (lower is better) Translates to: TFLLFRVRHHVQTTYSLLLLVSY*LPDSLP Trigger: GGGTAGTGAATCAGGAAGCCAGTAACTGACTAGGAG...AAGAAGGGAATAGGTGGTCTGAACGTGGTGTCTCACTCTGAAAAGCAGGAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR GCA 90 bp | TTATGGCAGGTCACAGTCCTTCCCCTCAGGAAAAAGAATGAAATGTCCTCCATTCAGCAAGACCATATTTaGTGGCTAGCAGCTCGTCAA | + |
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Preference number: 4 (lower is better) Translates to: LWQVTVLPLRKKNEMSSIQQDHI*WLAARQ Trigger: TTGACGAGCTGCTAGCCAGCAAATATGGTCTTGCTG...AATGGAGGACATTTCATTCTTTTTCCTGAGGGGAAGGACTGTGACCTGCCATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR CCA 90 bp | AGAGTGAGACACCACGTTCAGACCACCTATTCCCTTCTTGCGTTCTGTACACAGAATGTCCTCCATTTCTaGGCTCCCTTTTACATTTCA | + |
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Preference number: 4 (lower is better) Translates to: RVRHHVQTTYSLLAFCTQNVLHF*APFYIS Trigger: TGAAATGTAAAAGGGAGCCCAGAAATGGAGGACATT...CTGTGTACAGAACGCAAGAAGGGAATAGGTGGTCTGAACGTGGTGTCTCACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR TCA 90 bp | ACATTCCTGCTTTTCAGAGTGAGACACCACGTTCAGACCACCTATTCCCTTCTTCCTCAGGAAAAAGAATaGAATGTCCTCCATTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TFLLFRVRHHVQTTYSLLPQEKE*NVLHFW Trigger: CCAGAAATGGAGGACATTTCATTCTTTTTCCTGAGG...AAGAAGGGAATAGGTGGTCTGAACGTGGTGTCTCACTCTGAAAAGCAGGAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR CCA 90 bp | TTATGGCAGGTCACAGTCCTTCCCCTCAGGAAAAAGAATGAAATGTCCTCCATTCTGTATACCCTTTTCTaGGCAGTTGTAAAGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LWQVTVLPLRKKNEMSSILYTLF*AVVKQP Trigger: TGGCTGCTTTACAACTGCCCAGAAAAGGGTATACAG...AATGGAGGACATTTCATTCTTTTTCCTGAGGGGAAGGACTGTGACCTGCCATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR GCA 90 bp | TGGCTTCCTGATTCACTACCCAACTTTGAATCAATAGTTCTGAGTGATGTTTCCAAGAACATAGCACTTTaGATTATCGTTCTCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: WLPDSLPNFESIVLSDVSKNIAL*IIVLPL Trigger: CAGCGGGAGAACGATAATGCAAAGTGCTATGTTCTT...GGAAACATCACTCAGAACTATTGATTCAAAGTTGGGTAGTGAATCAGGAAGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR TCA 90 bp | ATTACATTGTCTCTTTCATCATCTTACATTCCTGCTTTTCAGAGTGAGACACCAATCAATAGTTCTGAGTaGTGTTTCCTGAACACCCAG | + |
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Preference number: 4 (lower is better) Translates to: ITLSLSSSYIPAFQSETPINSSE*CFLNTQ Trigger: CTGGGTGTTCAGGAAACATCACTCAGAACTATTGAT...TGGTGTCTCACTCTGAAAAGCAGGAATGTAAGATGATGAAAGAGACAATGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR CCA 90 bp | TGGCTTCCTGATTCACTACCCAACTTTGAATCAATAGTTCTGAGTGATGTTTCCGCTTCTTGTATATTCTaGGCAATCAGAGTTTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: WLPDSLPNFESIVLSDVSASCIF*AIRVLV Trigger: AACCAAAACTCTGATTGCCCAGAATATACAAGAAGC...GGAAACATCACTCAGAACTATTGATTCAAAGTTGGGTAGTGAATCAGGAAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS GCA 90 bp | GGGTCCGTTTCATCTTTTCTCGCTTCTCCTCGCTCTTGTGGCCACTaGCTGCGCTCTTGTCCATGGGTCTGCAGTCGTGTTGAACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: GSVSSFLASPRSCGH*LRSCPWVCSRVEQP Trigger: TGGCTGTTCAACACGACTGCAGACCCATGGACAAGAGCGCAGGCAGTGGCCACAAGAGCGAGGAGAAGCGAGAAAAGATGAAACGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000235382.7 ENST00000464302.1 ENST00000483295.1 |
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| CDS-3UTR CAA 90 bp | AGAGTGAGACACCACGTTCAGACCACCTATTCCCTTCTTGCGTTCTGTACACAGCCACTGCCTGCGCTCTaGTCCATGGGTCTGCAGTCG | + |
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Preference number: 5 (lower is better) Translates to: RVRHHVQTTYSLLAFCTQPLPAL*SMGLQS Trigger: CGACTGCAGACCCATGGACAAGAGCGCAGGCAGTGG...CTGTGTACAGAACGCAAGAAGGGAATAGGTGGTCTGAACGTGGTGTCTCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS TCA 90 bp | TTGTGGCCACTGCCTGCGCTCTTGTCCATGGGTCTGCAGTCGTGTTaGACAGCCAAGAACATAGCACTTTGCATTATCGTTCTCCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: LWPLPALLSMGLQSC*TAKNIALCIIVLPL Trigger: CAGCGGGAGAACGATAATGCAAAGTGCTATGTTCTTGGCTGTTCAACACGACTGCAGACCCATGGACAAGAGCGCAGGCAGTGGCCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000235382.7 ENST00000464302.1 ENST00000483295.1 |
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| CDS-3UTR CAA 90 bp | ATTCCTGCTTTTCAGAGTGAGACACCACGTTCAGACCACCTATTCCCTTCTTGCGGGTCTGCAGTCGTGTaGAACAGCCAAGAACATAGC | + |
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Preference number: 5 (lower is better) Translates to: IPAFQSETPRSDHLFPSCGSAVV*NSQEHS Trigger: GCTATGTTCTTGGCTGTTCAACACGACTGCAGACCC...GCAAGAAGGGAATAGGTGGTCTGAACGTGGTGTCTCACTCTGAAAAGCAGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR CAA 90 bp | ACCACGTTCAGACCACCTATTCCCTTCTTGCGTTCTGTACACAGTGAGGGAAGCTCCTCAGGAGAAGGCTaGATGAAAGCTTGCTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: TTFRPPIPFLRSVHSEGSSSGEG*MKACCL Trigger: CAAACAGCAAGCTTTCATCAAGCCTTCTCCTGAGGA...GCTTCCCTCACTGTGTACAGAACGCAAGAAGGGAATAGGTGGTCTGAACGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR CAA 90 bp | ACATTCCTGCTTTTCAGAGTGAGACACCACGTTCAGACCACCTATTCCCTTCTTGCAGCAAGACCATATTaGCTGGCTAGCAGCTCGTCA | + |
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Preference number: 5 (lower is better) Translates to: TFLLFRVRHHVQTTYSLLAARPY*LASSSS Trigger: TGACGAGCTGCTAGCCAGCAAATATGGTCTTGCTGC...AAGAAGGGAATAGGTGGTCTGAACGTGGTGTCTCACTCTGAAAAGCAGGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS CCA 90 bp | GCGATGTTAGCAATGGCTCAAGCTCAAGAGTTAACTTACATTTGCTaGCTAGCAGCTCGTCAAATGCTTCTGACCACAGCTGTGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: AMLAMAQAQELTYIC*LAARQMLLTTAVLP Trigger: AGGAAGCACAGCTGTGGTCAGAAGCATTTGACGAGCTGCTAGCCAGCAAATGTAAGTTAACTCTTGAGCTTGAGCCATTGCTAACATCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483295.1 |
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| CDS-3UTR CAA 90 bp | CGTTCAGACCACCTATTCCCTTCTTGCGTTCTGTACACAGTGAGGGAAGCTGTTGCCACTTGTAGCTTCTaGTATATTCTGGGCAATCAG | + |
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Preference number: 5 (lower is better) Translates to: RSDHLFPSCVLYTVREAVATCSF*YILGNQ Trigger: CTGATTGCCCAGAATATACAAGAAGCTACAAGTGGC...AACAGCTTCCCTCACTGTGTACAGAACGCAAGAAGGGAATAGGTGGTCTGAACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR CAA 90 bp | TTTCAGAGTGAGACACCACGTTCAGACCACCTATTCCCTTCTTGCGTTCTGTACAGGCTCTGTGGTGATTaGTGGCTTTTTACACAAGTC | + |
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Preference number: 5 (lower is better) Translates to: FQSETPRSDHLFPSCVLYRLCGD*WLFTQV Trigger: GACTTGTGTAAAAAGCCACAAATCACCACAGAGCCT...GTACAGAACGCAAGAAGGGAATAGGTGGTCTGAACGTGGTGTCTCACTCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS GCA 90 bp | TTTGCGATGTTAGCAATGGCTCAAGCTCAAGAGTTAACTTACATTTaGTGGCTAGCAGCTCGTCAAATGCTTCTGACCACAGCTGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: FAMLAMAQAQELTYI*WLAARQMLLTTAVL Trigger: AAGCACAGCTGTGGTCAGAAGCATTTGACGAGCTGCTAGCCAGCAAATGTAAGTTAACTCTTGAGCTTGAGCCATTGCTAACATCGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483295.1 |
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| CDS-3UTR CAA 90 bp | TGGCTTCCTGATTCACTACCCAACTTTGAATCAATAGTTCTGAGTGATGTTTCCCCACCTATTCCCTTCTaGCGTTCTGTACACAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: WLPDSLPNFESIVLSDVSPPIPF*RSVHSE Trigger: CTCACTGTGTACAGAACGCAAGAAGGGAATAGGTGG...GGAAACATCACTCAGAACTATTGATTCAAAGTTGGGTAGTGAATCAGGAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS TCA 90 bp | CTCTGTGGTGATTTGTGGCTTTTTACACAAGTCCTGGTAGAATTCTaGCTCCAAGAAACGAGGATAAGAGTTGTTCTCCATCAAGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: LCGDLWLFTQVLVEF*LQETRIRVVLHQAV Trigger: TACAGCTTGATGGAGAACAACTCTTATCCTCGTTTCTTGGAGTCAGAATTCTACCAGGACTTGTGTAAAAAGCCACAAATCACCACAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS-3UTR CAA 90 bp | TGGCTTCCTGATTCACTACCCAACTTTGAATCAATAGTTCTGAGTGATGTTTCCCAAGAACATAGCACTTaGCATTATCGTTCTCCCGCT | + |
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Preference number: 5 (lower is better) Translates to: WLPDSLPNFESIVLSDVSQEHST*HYRSPA Trigger: AGCGGGAGAACGATAATGCAAAGTGCTATGTTCTTG...GGAAACATCACTCAGAACTATTGATTCAAAGTTGGGTAGTGAATCAGGAAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS GCA 72 bp | CTTTTCTCGCTTCTCCTCGCTCTTGTGGCCACTGCCTaGGCTCTTGTCCATGGGTCTGCAGTCGTGTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LFSLLLALVATA*ALVHGSAVVLN Trigger: GTTCAACACGACTGCAGACCCATGGACAAGAGCGCAGGCAGTGGCCACAAGAGCGAGGAGAAGCGAGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000235382.7 ENST00000464302.1 ENST00000483295.1 |
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| CDS CAA 72 bp | GACTGCAGTCTAATCCCCCTCAGGCAAGCTGCTCTTTaGTTAGGTGGACGCAGCCTTTCCAGGCTTTTGCGA | + |
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Preference number: 6 (lower is better) Translates to: DCSLIPLRQAAL*LGGRSLSRLLR Trigger: TCGCAAAAGCCTGGAAAGGCTGCGTCCACCTAACAAAAGAGCAGCTTGCCTGAGGGGGATTAGACTGCAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483295.1 |
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| CDS CAA 90 bp | CTTGTGGCCACTGCCTGCGCTCTTGTCCATGGGTCTGCAGTCGTGTaGAACAGCCAAGAACATAGCACTTTGCATTATCGTTCTCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: LVATACALVHGSAVV*NSQEHSTLHYRSPA Trigger: AGCGGGAGAACGATAATGCAAAGTGCTATGTTCTTGGCTGTTCAACACGACTGCAGACCCATGGACAAGAGCGCAGGCAGTGGCCACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000235382.7 ENST00000464302.1 ENST00000483295.1 |
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| CDS GCA 72 bp | TGTAAGCTGATGAGAACTCATCATGCAACGTATGAATaGTGGGGACGCGCTTCAGCCGCAGGATTAGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CKLMRTHHATYE*WGRASAAGLGS Trigger: GGACCCTAATCCTGCGGCTGAAGCGCGTCCCCAGCATTCATACGTTGCATGATGAGTTCTCATCAGCTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487236.1 |
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| CDS CCA 72 bp | AAGCTGATGAGAACTCATCATGCAACGTATGAATGCTaGGGACGCGCTTCAGCCGCAGGATTAGGGTCCGTT | + |
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Preference number: 6 (lower is better) Translates to: KLMRTHHATYEC*GRASAAGLGSV Trigger: AACGGACCCTAATCCTGCGGCTGAAGCGCGTCCCCAGCATTCATACGTTGCATGATGAGTTCTCATCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487236.1 |
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| CDS TCA 72 bp | CTGCCTGCGCTCTTGTCCATGGGTCTGCAGTCGTGTTaGACAGCCAAGAACATAGCACTTTGCATTATCGTT | + |
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Preference number: 6 (lower is better) Translates to: LPALLSMGLQSC*TAKNIALCIIV Trigger: AACGATAATGCAAAGTGCTATGTTCTTGGCTGTTCAACACGACTGCAGACCCATGGACAAGAGCGCAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000235382.7 ENST00000464302.1 ENST00000483295.1 |
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| CDS CAA 72 bp | ACTGCCTGCGCTCTTGTCCATGGGTCTGCAGTCGTGTaGAACAGCCAAGAACATAGCACTTTGCATTATCGT | + |
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Preference number: 6 (lower is better) Translates to: TACALVHGSAVV*NSQEHSTLHYR Trigger: ACGATAATGCAAAGTGCTATGTTCTTGGCTGTTCAACACGACTGCAGACCCATGGACAAGAGCGCAGGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000235382.7 ENST00000464302.1 ENST00000483295.1 |
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| CDS CCA 72 bp | GCAATGGCTCAAGCTCAAGAGTTAACTTACATTTGCTaGCTAGCAGCTCGTCAAATGCTTCTGACCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: AMAQAQELTYIC*LAARQMLLTTA Trigger: AGCTGTGGTCAGAAGCATTTGACGAGCTGCTAGCCAGCAAATGTAAGTTAACTCTTGAGCTTGAGCCATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483295.1 |
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| CDS CAA 90 bp | TTTTGCGATGTTAGCAATGGCTCAAGCTCAAGAGTTAACTTACATTaGCTGGCTAGCAGCTCGTCAAATGCTTCTGACCACAGCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: FCDVSNGSSSRVNLH*LASSSSNASDHSCA Trigger: AGCACAGCTGTGGTCAGAAGCATTTGACGAGCTGCTAGCCAGCAAATGTAAGTTAACTCTTGAGCTTGAGCCATTGCTAACATCGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483295.1 |
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| CDS TCA 72 bp | TCCATTTCTGGGCTCCCTTTTACATTTCATGTAGCATaGGGCTCTGTGGTGATTTGTGGCTTTTTACACAAG | + |
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Preference number: 6 (lower is better) Translates to: SISGLPFTFHVA*GSVVICGFLHK Trigger: CTTGTGTAAAAAGCCACAAATCACCACAGAGCCTCATGCTACATGAAATGTAAAAGGGAGCCCAGAAATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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| CDS CAA 72 bp | TTTCTGGGCAGTTGTAAAGCAGCCACTTGTAGCTTCTaGTATATTCTGGGCAATCAGAGTTTTGGTTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: FLGSCKAATCSF*YILGNQSFGLK Trigger: TTTCAAACCAAAACTCTGATTGCCCAGAATATACAAGAAGCTACAAGTGGCTGCTTTACAACTGCCCAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000235382.7 |
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