Pregenerated sensors for RGS18 (Homo sapiens)
Ensembl gene IDs: ENSG00000150681Ensembl transcript IDs: ENST00000367460.4, ENST00000481707.5, ENST00000491030.1, ENST00000492967.5
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTAGTTCCCTACCTGGAGATATGCAAAATCTGGTCATGTTTCTGTaGCCAACAGAAGTACTTTGTATAACTGGGTACGTCCATGTTCAC | + |
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Preference number: 1 (lower is better) Translates to: LSSLPGDMQNLVMFL*PTEVLCITGYVHVH Trigger: GTGAACATGGACGTACCCAGTTATACAAAGTACTTCTGTTGGTCACAGAAACATGACCAGATTTTGCATATCTCCAGGTAGGGAACTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| 3UTR CCA 90 bp | AAATCTGGTCATGTTTCTGTGACCAACAGAAGTACTTTGTATAACTaGGTACGTCCATGTTCACTTAGGAATGAGTTCAAATGTGGATCT | + |
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Preference number: 1 (lower is better) Translates to: KSGHVSVTNRSTLYN*VRPCSLRNEFKCGS Trigger: AGATCCACATTTGAACTCATTCCTAAGTGAACATGGACGTACCCAGTTATACAAAGTACTTCTGTTGGTCACAGAAACATGACCAGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGCAGATGCCCAAATCGCTAGGGCCTTAGACTCCTTGCTTCTTCCCCTCATCCTAAAGGGCCAAACATaGGACGTCCTGGGAAAAACC | + |
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Preference number: 2 (lower is better) Translates to: VADAQIARALDSLLLPLILKGQT*DVLGKT Trigger: GGTTTTTCCCAGGACGTCTCATGTTTGGCCCTTTAG...GATGAGGGGAAGAAGCAAGGAGTCTAAGGCCCTAGCGATTTGGGCATCTGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| 3UTR-3UTR GCA 90 bp | AGGGCCAAACATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCCCCTACCTGGAGATATaGAAAATCTGGTCATGTTTC | + |
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Preference number: 2 (lower is better) Translates to: RAKHETSWEKPSLVFIQAPYLEI*KIWSCF Trigger: GAAACATGACCAGATTTTGCATATCTCCAGGTAGGG...GGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCATGTTTGGCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| 3UTR-3UTR GCA 90 bp | ATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCATTGATGGCCCACAAAAGTTCCTGTTaGTGGCTTATAACTAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: MRRPGKNLLWFLFKPLMAHKSSC*WLITRG Trigger: ACCTCTAGTTATAAGCCAGCAACAGGAACTTTTGTG...GGCCATCAATGGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| 3UTR-3UTR CCA 90 bp | ATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCATTGATGGCCGAGATATGCAAAATCTaGTCATGTTTCTGTGACCAA | + |
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Preference number: 2 (lower is better) Translates to: MRRPGKNLLWFLFKPLMAEICKI*SCFCDQ Trigger: TTGGTCACAGAAACATGACCAGATTTTGCATATCTC...GGCCATCAATGGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGTATAACTGGGTACGTCCATGTTCACTTAGGAATGAGTTCAAATGTGGAAAAAGTTCCTGTTGCTaGCTTATAACTAGAGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: TLYNWVRPCSLRNEFKCGKSSCC*LITRGD Trigger: ATCACCTCTAGTTATAAGCCAGCAACAGGAACTTTT...TCCACATTTGAACTCATTCCTAAGTGAACATGGACGTACCCAGTTATACAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| 3UTR-3UTR CAA 90 bp | GTGGCAGATGCCCAAATCGCTAGGGCCTTAGACTCCTTGCTTCTTCCCCTCATCACCAACAGAAGTACTTaGTATAACTGGGTACGTCCA | + |
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Preference number: 3 (lower is better) Translates to: VADAQIARALDSLLLPLITNRST*YNWVRP Trigger: TGGACGTACCCAGTTATACAAAGTACTTCTGTTGGT...GATGAGGGGAAGAAGCAAGGAGTCTAAGGCCCTAGCGATTTGGGCATCTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| 3UTR CCA 72 bp | CATGTTTCTGTGACCAACAGAAGTACTTTGTATAACTaGGTACGTCCATGTTCACTTAGGAATGAGTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: HVSVTNRSTLYN*VRPCSLRNEFK Trigger: TTTGAACTCATTCCTAAGTGAACATGGACGTACCCAGTTATACAAAGTACTTCTGTTGGTCACAGAAACATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CCA 90 bp | GTGGCAGATGCCCAAATCGCTAGGGCCTTAGACTCCTTGCTTCTTCCCCTCATCAGTGCCCAGATCTACTaGAGCGGGTGTCTTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: VADAQIARALDSLLLPLISAQIY*SGCLHE Trigger: TTCATGAAGACACCCGCTCCAGTAGATCTGGGCACT...GATGAGGGGAAGAAGCAAGGAGTCTAAGGCCCTAGCGATTTGGGCATCTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR TCA 90 bp | GTGGCAGATGCCCAAATCGCTAGGGCCTTAGACTCCTTGCTTCTTCCCCTCATCCCAAATGGCAACATCTaGTTGTACATCTTGGAATTC | + |
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Preference number: 4 (lower is better) Translates to: VADAQIARALDSLLLPLIPNGNI*LYILEF Trigger: GAATTCCAAGATGTACAATCAGATGTTGCCATTTGG...GATGAGGGGAAGAAGCAAGGAGTCTAAGGCCCTAGCGATTTGGGCATCTGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR TCA 90 bp | ATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCATTGATGGCCCTAAAGGGCCAAACATaGGACGTCCTGGGAAAAACC | + |
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Preference number: 4 (lower is better) Translates to: MRRPGKNLLWFLFKPLMALKGQT*DVLGKT Trigger: GGTTTTTCCCAGGACGTCTCATGTTTGGCCCTTTAG...GGCCATCAATGGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR TCA 90 bp | ATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCATTGATGGCCGTCCCTTGCTTTTCTTaGAATCTTCACAGGCTATCC | + |
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Preference number: 4 (lower is better) Translates to: MRRPGKNLLWFLFKPLMAVPCFS*NLHRLS Trigger: GGATAGCCTGTGAAGATTTCAAGAAAAGCAAGGGAC...GGCCATCAATGGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR TCA 90 bp | AGGGCCAAACATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCCTGGTCATGTTTCTGTaGCCAACAGAAGTACTTTGT | + |
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Preference number: 4 (lower is better) Translates to: RAKHETSWEKPSLVFIQALVMFL*PTEVLC Trigger: ACAAAGTACTTCTGTTGGTCACAGAAACATGACCAG...GGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCATGTTTGGCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CCA 90 bp | ATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCATTGATGGCCAGACTCTTGTTTCTTTaGCCAAGTGCCCAGATCTAC | + |
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Preference number: 4 (lower is better) Translates to: MRRPGKNLLWFLFKPLMARLLFL*PSAQIY Trigger: GTAGATCTGGGCACTTGGCCAAAGAAACAAGAGTCT...GGCCATCAATGGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR GCA 90 bp | ACTTTGTATAACTGGGTACGTCCATGTTCACTTAGGAATGAGTTCAAATGTGGATTCACCCCATTTCACTaGCTCTTCAGGGGAGACTCT | + |
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Preference number: 4 (lower is better) Translates to: TLYNWVRPCSLRNEFKCGFTPFH*LFRGDS Trigger: AGAGTCTCCCCTGAAGAGGCAGTGAAATGGGGTGAA...TCCACATTTGAACTCATTCCTAAGTGAACATGGACGTACCCAGTTATACAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR GCA 90 bp | AGGGCCAAACATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCCACAAAAGTTCCTGTTaGTGGCTTATAACTAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: RAKHETSWEKPSLVFIQAHKSSC*WLITRG Trigger: ACCTCTAGTTATAAGCCAGCAACAGGAACTTTTGTG...GGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCATGTTTGGCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR TCA 90 bp | ACTTTGTATAACTGGGTACGTCCATGTTCACTTAGGAATGAGTTCAAATGTGGACTGTGGAGGGTAGGTTaGGTGATGCTGTTTGTAATG | + |
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Preference number: 4 (lower is better) Translates to: TLYNWVRPCSLRNEFKCGLWRVG*VMLFVM Trigger: CATTACAAACAGCATCACTCAACCTACCCTCCACAG...TCCACATTTGAACTCATTCCTAAGTGAACATGGACGTACCCAGTTATACAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CCA 90 bp | AGGGCCAAACATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCTCTAGTCCATCTCTATaGGAAAGCAGTTTGTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: RAKHETSWEKPSLVFIQASSPSL*ESSLSN Trigger: ATTTGACAAACTGCTTTCCCATAGAGATGGACTAGA...GGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCATGTTTGGCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR TCA 90 bp | ACTTTGTATAACTGGGTACGTCCATGTTCACTTAGGAATGAGTTCAAATGTGGAAGATTTGTTGGTCTCTaGGGTCTTCCTTCCATCAAG | + |
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Preference number: 4 (lower is better) Translates to: TLYNWVRPCSLRNEFKCGRFVGL*GLPSIK Trigger: CTTGATGGAAGGAAGACCTCAGAGACCAACAAATCT...TCCACATTTGAACTCATTCCTAAGTGAACATGGACGTACCCAGTTATACAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CCA 90 bp | ATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCATTGATGGCCAGTACTTTGTATAACTaGGTACGTCCATGTTCACTT | + |
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Preference number: 4 (lower is better) Translates to: MRRPGKNLLWFLFKPLMASTLYN*VRPCSL Trigger: AAGTGAACATGGACGTACCCAGTTATACAAAGTACT...GGCCATCAATGGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CCA 90 bp | ATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCATTGATGGCCGGGAAAAACCTTCTCTaGTTTTTATTCAAGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: MRRPGKNLLWFLFKPLMAGKNLL*FLFKPL Trigger: CAATGGCTTGAATAAAAACCAGAGAAGGTTTTTCCC...GGCCATCAATGGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR GCA 90 bp | ACTTTGTATAACTGGGTACGTCCATGTTCACTTAGGAATGAGTTCAAATGTGGACCCTACCTGGAGATATaGAAAATCTGGTCATGTTTC | + |
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Preference number: 4 (lower is better) Translates to: TLYNWVRPCSLRNEFKCGPYLEI*KIWSCF Trigger: GAAACATGACCAGATTTTGCATATCTCCAGGTAGGG...TCCACATTTGAACTCATTCCTAAGTGAACATGGACGTACCCAGTTATACAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CCA 90 bp | ACTTTGTATAACTGGGTACGTCCATGTTCACTTAGGAATGAGTTCAAATGTGGAGAATATGAACCAATGTaGCAGATGCCCAAATCGCTA | + |
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Preference number: 4 (lower is better) Translates to: TLYNWVRPCSLRNEFKCGEYEPM*QMPKSL Trigger: TAGCGATTTGGGCATCTGCCACATTGGTTCATATTC...TCCACATTTGAACTCATTCCTAAGTGAACATGGACGTACCCAGTTATACAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| 3UTR CAA 72 bp | AAATCTGGTCATGTTTCTGTGACCAACAGAAGTACTTaGTATAACTGGGTACGTCCATGTTCACTTAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: KSGHVSVTNRST*YNWVRPCSLRN Trigger: ATTCCTAAGTGAACATGGACGTACCCAGTTATACAAAGTACTTCTGTTGGTCACAGAAACATGACCAGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR TCA 90 bp | AGGATGGGACCAAATCTTAACATAAACATGCGATATGTTAGAAGCAGATGTATAAAGCAGTTTGTCAAATaGTTCACCCCATTTCACTGC | + |
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Preference number: 4 (lower is better) Translates to: RMGPNLNINMRYVRSRCIKQFVK*FTPFHC Trigger: GCAGTGAAATGGGGTGAATCATTTGACAAACTGCTT...TATACATCTGCTTCTAACATATCGCATGTTTATGTTAAGATTTGGTCCCATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR TCA 90 bp | AGGATGGGACCAAATCTTAACATAAACATGCGATATGTTAGAAGCAGATGTATAAACTGTCTTGTTCCATaGGCTGATACACTCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RMGPNLNINMRYVRSRCINCLVP*ADTLCF Trigger: AAAGCAGAGTGTATCAGCTCATGGAACAAGACAGTT...TATACATCTGCTTCTAACATATCGCATGTTTATGTTAAGATTTGGTCCCATCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR GCA 90 bp | AGGATGGGACCAAATCTTAACATAAACATGCGATATGTTAGAAGCAGATGTATAATACACTCTGCTTTGTaGAGCATCAAAACTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RMGPNLNINMRYVRSRCIIHSAL*SIKTVE Trigger: CTCCACAGTTTTGATGCTGCACAAAGCAGAGTGTAT...TATACATCTGCTTCTAACATATCGCATGTTTATGTTAAGATTTGGTCCCATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CCA 90 bp | ACTTTGTATAACTGGGTACGTCCATGTTCACTTAGGAATGAGTTCAAATGTGGAAAGGTTAACCTCTTTTaGGGCATCAGTCTGTATAAA | + |
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Preference number: 4 (lower is better) Translates to: TLYNWVRPCSLRNEFKCGKVNLF*GISLYK Trigger: TTTATACAGACTGATGCCCCAAAAGAGGTTAACCTT...TCCACATTTGAACTCATTCCTAAGTGAACATGGACGTACCCAGTTATACAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CCA 90 bp | AGGATGGGACCAAATCTTAACATAAACATGCGATATGTTAGAAGCAGATGTATATCTCCTAAGATTTGTTaGTCTCTGAGGTCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: RMGPNLNINMRYVRSRCISPKIC*SLRSSF Trigger: GAAGGAAGACCTCAGAGACCAACAAATCTTAGGAGA...TATACATCTGCTTCTAACATATCGCATGTTTATGTTAAGATTTGGTCCCATCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CCA 90 bp | ACTTTGTATAACTGGGTACGTCCATGTTCACTTAGGAATGAGTTCAAATGTGGAGAGATATGCAAAATCTaGTCATGTTTCTGTGACCAA | + |
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Preference number: 4 (lower is better) Translates to: TLYNWVRPCSLRNEFKCGEICKI*SCFCDQ Trigger: TTGGTCACAGAAACATGACCAGATTTTGCATATCTC...TCCACATTTGAACTCATTCCTAAGTGAACATGGACGTACCCAGTTATACAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CCA 90 bp | AGGATGGGACCAAATCTTAACATAAACATGCGATATGTTAGAAGCAGATGTATAAAACATGAGACGTCCTaGGAAAAACCTTCTCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: RMGPNLNINMRYVRSRCIKHETS*EKPSLV Trigger: AACCAGAGAAGGTTTTTCCCAGGACGTCTCATGTTT...TATACATCTGCTTCTAACATATCGCATGTTTATGTTAAGATTTGGTCCCATCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CAA 90 bp | GTGGCAGATGCCCAAATCGCTAGGGCCTTAGACTCCTTGCTTCTTCCCCTCATCACTGTGGAGGGTAGGTaGAGTGATGCTGTTTGTAAT | + |
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Preference number: 5 (lower is better) Translates to: VADAQIARALDSLLLPLITVEGR*SDAVCN Trigger: ATTACAAACAGCATCACTCAACCTACCCTCCACAGT...GATGAGGGGAAGAAGCAAGGAGTCTAAGGCCCTAGCGATTTGGGCATCTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CAA 90 bp | GTGGCAGATGCCCAAATCGCTAGGGCCTTAGACTCCTTGCTTCTTCCCCTCATCCTGATACACTCTGCTTaGTGCAGCATCAAAACTGTG | + |
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Preference number: 5 (lower is better) Translates to: VADAQIARALDSLLLPLILIHSA*CSIKTV Trigger: CACAGTTTTGATGCTGCACAAAGCAGAGTGTATCAG...GATGAGGGGAAGAAGCAAGGAGTCTAAGGCCCTAGCGATTTGGGCATCTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CAA 90 bp | AGGGCCAAACATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCCTTCAGGGGAGACTCTaGTTTCTTTGGCCAAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: RAKHETSWEKPSLVFIQALQGRL*FLWPSA Trigger: GGCACTTGGCCAAAGAAACAAGAGTCTCCCCTGAAG...GGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCATGTTTGGCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CAA 90 bp | AGGGCCAAACATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCAGGGCCTTAGACTCCTaGCTTCTTCCCCTCATCTCA | + |
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Preference number: 5 (lower is better) Translates to: RAKHETSWEKPSLVFIQARALDS*LLPLIS Trigger: TGAGATGAGGGGAAGAAGCAAGGAGTCTAAGGCCCT...GGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCATGTTTGGCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CAA 90 bp | GTGGCAGATGCCCAAATCGCTAGGGCCTTAGACTCCTTGCTTCTTCCCCTCATCTTTAAGGTGAATTTGTaGAGGTCCCTTGCTTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: VADAQIARALDSLLLPLIFKVNL*RSLAFL Trigger: AAGAAAAGCAAGGGACCTCAACAAATTCACCTTAAA...GATGAGGGGAAGAAGCAAGGAGTCTAAGGCCCTAGCGATTTGGGCATCTGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CAA 90 bp | AGGGCCAAACATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCGAGACTCTTGTTTCTTaGGCCAAGTGCCCAGATCTA | + |
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Preference number: 5 (lower is better) Translates to: RAKHETSWEKPSLVFIQAETLVS*AKCPDL Trigger: TAGATCTGGGCACTTGGCCAAAGAAACAAGAGTCTC...GGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCATGTTTGGCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS TCA 90 bp | GCTCAGTTGAGTCTTTCTATCTCTATGGGAAAGCAGTTTGTCAAATaGTTCACCCCATTTCACTGCCTCTTCAGGGGAGACTCTTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: AQLSLSISMGKQFVK*FTPFHCLFRGDSCF Trigger: GAAACAAGAGTCTCCCCTGAAGAGGCAGTGAAATGGGGTGAATCATTTGACAAACTGCTTTCCCATAGAGATAGAAAGACTCAACTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481707.5 ENST00000492967.5 |
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| CDS TCA 90 bp | TTGGTGAAAGTACCACTAACCTCTATGGGAAAGCAGTTTGTCAAATaGTTCACCCCATTTCACTGCCTCTTCAGGGGAGACTCTTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: LVKVPLTSMGKQFVK*FTPFHCLFRGDSCF Trigger: GAAACAAGAGTCTCCCCTGAAGAGGCAGTGAAATGGGGTGAATCATTTGACAAACTGCTTTCCCATAGAGGTTAGTGGTACTTTCACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491030.1 |
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| CDS GCA 90 bp | ACGTGTATAACTGTCTTGTTCCATGAGCTGATACACTCTGCTTTGTaGAGCATCAAAACTGTGGAGGGTAGGTTGAGTGATGCTGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: TCITVLFHELIHSAL*SIKTVEGRLSDAVC Trigger: ACAAACAGCATCACTCAACCTACCCTCCACAGTTTTGATGCTGCACAAAGCAGAGTGTATCAGCTCATGGAACAAGACAGTTATACACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CAA 90 bp | ATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCATTGATGGCCTCCTTAGCTCTGATTTaGGCTTCTTTGCTTGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: MRRPGKNLLWFLFKPLMASLALI*ASLLVS Trigger: AGAAACAAGCAAAGAAGCCAAAATCAGAGCTAAGGA...GGCCATCAATGGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CAA 90 bp | ATGAGACGTCCTGGGAAAAACCTTCTCTGGTTTTTATTCAAGCCATTGATGGCCTGCTTTAAGGTGAATTaGTTGAGGTCCCTTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: MRRPGKNLLWFLFKPLMACFKVN*LRSLAF Trigger: AAAAGCAAGGGACCTCAACAAATTCACCTTAAAGCA...GGCCATCAATGGCTTGAATAAAAACCAGAGAAGGTTTTTCCCAGGACGTCTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS TCA 90 bp | AATAGATGTCAGATTTCAGAAAACGTGTATAACTGTCTTGTTCCATaGGCTGATACACTCTGCTTTGTGCAGCATCAAAACTGTGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: NRCQISENVYNCLVP*ADTLCFVQHQNCGG Trigger: CCCTCCACAGTTTTGATGCTGCACAAAGCAGAGTGTATCAGCTCATGGAACAAGACAGTTATACACGTTTTCTGAAATCTGACATCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS GCA 90 bp | TTAAGAAATCTGGTAAAAGCCTCTAGTCCATCTAGCTGCATCACCTaGTCAGTTGAGTCTTTCTATCTCTATGGGAAAGCAGTTTGTCAA | + |
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Preference number: 5 (lower is better) Translates to: LRNLVKASSPSSCIT*SVESFYLYGKAVCQ Trigger: TTGACAAACTGCTTTCCCATAGAGATAGAAAGACTCAACTGAGCAGGTGATGCAGCTAGATGGACTAGAGGCTTTTACCAGATTTCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492967.5 |
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| CDS GCA 90 bp | AATTCAGTTTTAAGAAATCTGGTAAAAGCCTCTAGTCCATCTAGCTaGATCACCTGCTCAGTTGAGTCTTTCTATCTCTATGGGAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: NSVLRNLVKASSPSS*ITCSVESFYLYGKA Trigger: TGCTTTCCCATAGAGATAGAAAGACTCAACTGAGCAGGTGATGCAGCTAGATGGACTAGAGGCTTTTACCAGATTTCTTAAAACTGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492967.5 |
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| CDS-3UTR CAA 90 bp | ACTTTGTATAACTGGGTACGTCCATGTTCACTTAGGAATGAGTTCAAATGTGGACTATGGGAAAGCAGTTaGTCAAATGATTCACCCCAT | + |
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Preference number: 5 (lower is better) Translates to: TLYNWVRPCSLRNEFKCGLWESS*SNDSPH Trigger: ATGGGGTGAATCATTTGACAAACTGCTTTCCCATAG...TCCACATTTGAACTCATTCCTAAGTGAACATGGACGTACCCAGTTATACAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CAA 90 bp | ACTTTGTATAACTGGGTACGTCCATGTTCACTTAGGAATGAGTTCAAATGTGGAACGTGTATAACTGTCTaGTTCCATGAGCTGATACAC | + |
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Preference number: 5 (lower is better) Translates to: TLYNWVRPCSLRNEFKCGTCITV*FHELIH Trigger: GTGTATCAGCTCATGGAACAAGACAGTTATACACGT...TCCACATTTGAACTCATTCCTAAGTGAACATGGACGTACCCAGTTATACAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CAA 90 bp | AGGATGGGACCAAATCTTAACATAAACATGCGATATGTTAGAAGCAGATGTATAACCAACAGAAGTACTTaGTATAACTGGGTACGTCCA | + |
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Preference number: 5 (lower is better) Translates to: RMGPNLNINMRYVRSRCITNRST*YNWVRP Trigger: TGGACGTACCCAGTTATACAAAGTACTTCTGTTGGT...TATACATCTGCTTCTAACATATCGCATGTTTATGTTAAGATTTGGTCCCATCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS-3UTR CAA 90 bp | AGGATGGGACCAAATCTTAACATAAACATGCGATATGTTAGAAGCAGATGTATAACATCTTGGAATTCATaGCAGGTAAATGAGCGTGAT | + |
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Preference number: 5 (lower is better) Translates to: RMGPNLNINMRYVRSRCITSWNS*QVNERD Trigger: ATCACGCTCATTTACCTGCAATGAATTCCAAGATGT...TATACATCTGCTTCTAACATATCGCATGTTTATGTTAAGATTTGGTCCCATCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS TCA 72 bp | GTACCACTAACCTCTATGGGAAAGCAGTTTGTCAAATaGTTCACCCCATTTCACTGCCTCTTCAGGGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: VPLTSMGKQFVK*FTPFHCLFRGD Trigger: GTCTCCCCTGAAGAGGCAGTGAAATGGGGTGAATCATTTGACAAACTGCTTTCCCATAGAGGTTAGTGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491030.1 |
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| CDS GCA 72 bp | CTGGTAAAAGCCTCTAGTCCATCTAGCTGCATCACCTaGTCAGTTGAGTCTTTCTATCTCTATGGGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LVKASSPSSCIT*SVESFYLYGKA Trigger: TGCTTTCCCATAGAGATAGAAAGACTCAACTGAGCAGGTGATGCAGCTAGATGGACTAGAGGCTTTTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492967.5 |
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| CDS CAA 72 bp | AAGCCTCTAGTCCATCTAGCTGCATCACCTGCTCAGTaGAGTCTTTCTATCTCTATGGGAAAGCAGTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: KPLVHLAASPAQ*SLSISMGKQFV Trigger: GACAAACTGCTTTCCCATAGAGATAGAAAGACTCAACTGAGCAGGTGATGCAGCTAGATGGACTAGAGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492967.5 |
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| CDS TCA 72 bp | AGTCTTTCTATCTCTATGGGAAAGCAGTTTGTCAAATaGTTCACCCCATTTCACTGCCTCTTCAGGGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: SLSISMGKQFVK*FTPFHCLFRGD Trigger: GTCTCCCCTGAAGAGGCAGTGAAATGGGGTGAATCATTTGACAAACTGCTTTCCCATAGAGATAGAAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481707.5 ENST00000492967.5 |
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| CDS CAA 72 bp | ATAACTGTCTTGTTCCATGAGCTGATACACTCTGCTTaGTGCAGCATCAAAACTGTGGAGGGTAGGTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: ITVLFHELIHSA*CSIKTVEGRLS Trigger: ACTCAACCTACCCTCCACAGTTTTGATGCTGCACAAAGCAGAGTGTATCAGCTCATGGAACAAGACAGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS CAA 72 bp | CCAGTTGTAACTAGACTAGCTGCATCACCTGCTCAGTaGAGTCTTTCTATCTCTATGGGAAAGCAGTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: PVVTRLAASPAQ*SLSISMGKQFV Trigger: GACAAACTGCTTTCCCATAGAGATAGAAAGACTCAACTGAGCAGGTGATGCAGCTAGTCTAGTTACAACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481707.5 |
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| CDS CAA 90 bp | AAAACGTGTATAACTGTCTTGTTCCATGAGCTGATACACTCTGCTTaGTGCAGCATCAAAACTGTGGAGGGTAGGTTGAGTGATGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: KTCITVLFHELIHSA*CSIKTVEGRLSDAV Trigger: AACAGCATCACTCAACCTACCCTCCACAGTTTTGATGCTGCACAAAGCAGAGTGTATCAGCTCATGGAACAAGACAGTTATACACGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS CAA 72 bp | GTAAAAGCCTCTAGTCCATCTCTATGGGAAAGCAGTTaGTCAAATGATTCACCCCATTTCACTGCCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: VKASSPSLWESS*SNDSPHFTASS Trigger: TGAAGAGGCAGTGAAATGGGGTGAATCATTTGACAAACTGCTTTCCCATAGAGATGGACTAGAGGCTTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS CAA 72 bp | TCTGCTTTGTGCAGCATCAAAACTGTGGAGGGTAGGTaGAGTGATGCTGTTTGTAATGACTTCTTTTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SALCSIKTVEGR*SDAVCNDFFCV Trigger: CACACAAAAGAAGTCATTACAAACAGCATCACTCAACCTACCCTCCACAGTTTTGATGCTGCACAAAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS TCA 72 bp | CAGATTTCAGAAAACGTGTATAACTGTCTTGTTCCATaGGCTGATACACTCTGCTTTGTGCAGCATCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: QISENVYNCLVP*ADTLCFVQHQN Trigger: GTTTTGATGCTGCACAAAGCAGAGTGTATCAGCTCATGGAACAAGACAGTTATACACGTTTTCTGAAATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS CAA 72 bp | ATAGATGTCAGATTTCAGAAAACGTGTATAACTGTCTaGTTCCATGAGCTGATACACTCTGCTTTGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: IDVRFQKTCITV*FHELIHSALCS Trigger: GCTGCACAAAGCAGAGTGTATCAGCTCATGGAACAAGACAGTTATACACGTTTTCTGAAATCTGACATCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS CAA 90 bp | CTTTATAACCAAATGGCAACATCTGATTGTACATCTTGGAATTCATaGCAGGTAAATGAGCGTGATCGTCTCCTAAGATTTGTTGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LYNQMATSDCTSWNS*QVNERDRLLRFVGL Trigger: GAGACCAACAAATCTTAGGAGACGATCACGCTCATTTACCTGCAATGAATTCCAAGATGTACAATCAGATGTTGCCATTTGGTTATAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS CAA 72 bp | CAAATGGCAACATCTGATTGTACATCTTGGAATTCATaGCAGGTAAATGAGCGTGATCGTCTCCTAAGATTT | + |
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Preference number: 6 (lower is better) Translates to: QMATSDCTSWNS*QVNERDRLLRF Trigger: AAATCTTAGGAGACGATCACGCTCATTTACCTGCAATGAATTCCAAGATGTACAATCAGATGTTGCCATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367460.4 |
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| CDS CAA 72 bp | TTTCTCATATATTGCTTTTGCTTTAAGGTGAATTTGTaGAGGTCCCTTGCTTTTCTTGAAATCTTCACAGGC | + |
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Preference number: 6 (lower is better) Translates to: FLIYCFCFKVNL*RSLAFLEIFTG Trigger: GCCTGTGAAGATTTCAAGAAAAGCAAGGGACCTCAACAAATTCACCTTAAAGCAAAAGCAATATATGAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367460.4 ENST00000492967.5 |
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