Pregenerated sensors for RGS13 (Homo sapiens)
Ensembl gene IDs: ENSG00000127074Ensembl transcript IDs: ENST00000391995.7, ENST00000462955.1, ENST00000482095.1, ENST00000543215.5
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGGGCGTGGGAGGAGGGAGAGCATCAGGAATAATAGCTATTGGATaGTGGGCTTACTACCTAGGTGATAGGATGATCTGTGCAGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: GGVGGGRASGIIAIG*WAYYLGDRMICAAN Trigger: GTTTGCTGCACAGATCATCCTATCACCTAGGTAGTAAGCCCAGCATCCAATAGCTATTATTCCTGATGCTCTCCCTCCTCCCACGCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CCA 90 bp | GGCGTGGGAGGAGGGAGAGCATCAGGAATAATAGCTATTGGATGCTaGGCTTACTACCTAGGTGATAGGATGATCTGTGCAGCAAACCAT | + |
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Preference number: 5 (lower is better) Translates to: GVGGGRASGIIAIGC*AYYLGDRMICAANH Trigger: ATGGTTTGCTGCACAGATCATCCTATCACCTAGGTAGTAAGCCCAGCATCCAATAGCTATTATTCCTGATGCTCTCCCTCCTCCCACGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CCA 90 bp | CTGCCTGTTCTCACTTATAAGTGGGAACTGAATGATGAGAACATATaGACACATTGGGGAGAACAACACACACTGGGGCCTGTTGTAGGG | + |
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Preference number: 5 (lower is better) Translates to: LPVLTYKWELNDENI*THWGEQHTLGPVVG Trigger: CCCTACAACAGGCCCCAGTGTGTGTTGTTCTCCCCAATGTGTCCATATGTTCTCATCATTCAGTTCCCACTTATAAGTGAGAACAGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CCA 90 bp | GGCCAGGGAAGTTTCCAAAACCATGGCTTACTCAGGAAGATGCAGTaGTTTCTTAGTAGCAGTCTACAAATCAGGAAGTTTGTAAGACAA | + |
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Preference number: 5 (lower is better) Translates to: GQGSFQNHGLLRKMQ*FLSSSLQIRKFVRQ Trigger: TTGTCTTACAAACTTCCTGATTTGTAGACTGCTACTAAGAAACCACTGCATCTTCCTGAGTAAGCCATGGTTTTGGAAACTTCCCTGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS TCA 90 bp | GAACAGAAAATCAAATACTGCCTGTTCTCACTTATAAGTGGGAACTaGATGATGAGAACATATGGACACATTGGGGAGAACAACACACAC | + |
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Preference number: 5 (lower is better) Translates to: EQKIKYCLFSLISGN*MMRTYGHIGENNTH Trigger: GTGTGTGTTGTTCTCCCCAATGTGTCCATATGTTCTCATCATTCAGTTCCCACTTATAAGTGAGAACAGGCAGTATTTGATTTTCTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CCA 90 bp | AATGCAGGAACAGAAAATCAAATACTGCCTGTTCTCACTTATAAGTaGGAACTGAATGATGAGAACATATGGACACATTGGGGAGAACAA | + |
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Preference number: 5 (lower is better) Translates to: NAGTENQILPVLTYK*ELNDENIWTHWGEQ Trigger: TTGTTCTCCCCAATGTGTCCATATGTTCTCATCATTCAGTTCCCACTTATAAGTGAGAACAGGCAGTATTTGATTTTCTGTTCCTGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS TCA 90 bp | AACCTTTTCAATCTGGTGAAATGGAAAGAGCTAGGCAAGGTTTATTaGATGCCTGTCCGTTCTAATCATTCCCATTATATAGGGAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: NLFNLVKWKELGKVY*MPVRSNHSHYIGKN Trigger: ATTCTTCCCTATATAATGGGAATGATTAGAACGGACAGGCATTCAATAAACCTTGCCTAGCTCTTTCCATTTCACCAGATTGAAAAGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS GCA 72 bp | GGAGGAGGGAGAGCATCAGGAATAATAGCTATTGGATaGTGGGCTTACTACCTAGGTGATAGGATGATCTGT | + |
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Preference number: 6 (lower is better) Translates to: GGGRASGIIAIG*WAYYLGDRMIC Trigger: ACAGATCATCCTATCACCTAGGTAGTAAGCCCAGCATCCAATAGCTATTATTCCTGATGCTCTCCCTCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CCA 72 bp | GGAGGGAGAGCATCAGGAATAATAGCTATTGGATGCTaGGCTTACTACCTAGGTGATAGGATGATCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: GGRASGIIAIGC*AYYLGDRMICA Trigger: TGCACAGATCATCCTATCACCTAGGTAGTAAGCCCAGCATCCAATAGCTATTATTCCTGATGCTCTCCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CCA 72 bp | AGCTGTCCCTTAATTAGCAGATTATACCTTTGTCCTTaGATGCACCTGTGCAGTGCAGTAGCATTCACTGTC | + |
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Preference number: 6 (lower is better) Translates to: SCPLISRLYLCP*MHLCSAVAFTV Trigger: GACAGTGAATGCTACTGCACTGCACAGGTGCATCCAAGGACAAAGGTATAATCTGCTAATTAAGGGACAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CCA 72 bp | CTCACTTATAAGTGGGAACTGAATGATGAGAACATATaGACACATTGGGGAGAACAACACACACTGGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LTYKWELNDENI*THWGEQHTLGP Trigger: AGGCCCCAGTGTGTGTTGTTCTCCCCAATGTGTCCATATGTTCTCATCATTCAGTTCCCACTTATAAGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS TCA 72 bp | GTGCAGTGCAGTAGCATTCACTGTCATTTAAAATGCTaGGCTTTGGGTCTTACTATCTCCTCTGACCACCAT | + |
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Preference number: 6 (lower is better) Translates to: VQCSSIHCHLKC*ALGLTISSDHH Trigger: ATGGTGGTCAGAGGAGATAGTAAGACCCAAAGCTCAGCATTTTAAATGACAGTGAATGCTACTGCACTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS TCA 72 bp | TCCTGCCAGTTTTGGATGGACTGCTTGCATCAGTACTaGGGCTTAACAGTGTACTGTGTTAAGATTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SCQFWMDCLHQY*GLTVYCVKIAF Trigger: GAAAGCAATCTTAACACAGTACACTGTTAAGCCTCAGTACTGATGCAAGCAGTCCATCCAAAACTGGCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CCA 72 bp | GTTATAGAAAAGTGTGGAGGAAGAGACTTGGGAGCTTaGTTAACATTTGATTCCTCCTCCAGTCTCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: VIEKCGGRDLGA*LTFDSSSSLTF Trigger: GAAGGTGAGACTGGAGGAGGAATCAAATGTTAACCAAGCTCCCAAGTCTCTTCCTCCACACTTTTCTATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CCA 72 bp | CTGTCATTGTCAGGTAGTTACCTCTCTAGGGGACTGTaGCTGGATGTAAATCTTATAAAGCTTCTTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: LSLSGSYLSRGL*LDVNLIKLLCP Trigger: AGGGCAAAGAAGCTTTATAAGATTTACATCCAGCCACAGTCCCCTAGAGAGGTAACTACCTGACAATGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS GCA 72 bp | ACTGCCAAATTGCTTTTAAAAGGGTTATGCACTGTTTaGCGCTGCCACCAGCCAAGTGTTTACCTATTTATC | + |
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Preference number: 6 (lower is better) Translates to: TAKLLLKGLCTV*RCHQPSVYLFI Trigger: GATAAATAGGTAAACACTTGGCTGGTGGCAGCGGCAAACAGTGCATAACCCTTTTAAAAGCAATTTGGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CAA 72 bp | GACTGCCAAATTGCTTTTAAAAGGGTTATGCACTGTTaGCCGCTGCCACCAGCCAAGTGTTTACCTATTTAT | + |
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Preference number: 6 (lower is better) Translates to: DCQIAFKRVMHC*PLPPAKCLPIY Trigger: ATAAATAGGTAAACACTTGGCTGGTGGCAGCGGCAAACAGTGCATAACCCTTTTAAAAGCAATTTGGCAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CCA 72 bp | TGTCGAACTGTCAATGTTAATCTCTCTAGGGGACTGTaGCTGGATGTAAATCTTATAAAGCTTCTTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: CRTVNVNLSRGL*LDVNLIKLLCP Trigger: AGGGCAAAGAAGCTTTATAAGATTTACATCCAGCCACAGTCCCCTAGAGAGATTAACATTGACAGTTCGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000391995.7 ENST00000462955.1 ENST00000543215.5 |
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| CDS CCA 72 bp | GCACTCATGGTTAATCTAACAGGGGTTCTCAACTTTTaGGAATTCTTTCAGGTGAGGAAATCCAATGCAATG | + |
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Preference number: 6 (lower is better) Translates to: ALMVNLTGVLNF*EFFQVRKSNAM Trigger: CATTGCATTGGATTTCCTCACCTGAAAGAATTCCCAAAAGTTGAGAACCCCTGTTAGATTAACCATGAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CAA 90 bp | TTTGGTACAGACTGCCAAATTGCTTTTAAAAGGGTTATGCACTGTTaGCCGCTGCCACCAGCCAAGTGTTTACCTATTTATCTATTAGAA | + |
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Preference number: 6 (lower is better) Translates to: FGTDCQIAFKRVMHC*PLPPAKCLPIYLLE Trigger: TTCTAATAGATAAATAGGTAAACACTTGGCTGGTGGCAGCGGCAAACAGTGCATAACCCTTTTAAAAGCAATTTGGCAGTCTGTACCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS TCA 72 bp | AATCTGGTGAAATGGAAAGAGCTAGGCAAGGTTTATTaGATGCCTGTCCGTTCTAATCATTCCCATTATATA | + |
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Preference number: 6 (lower is better) Translates to: NLVKWKELGKVY*MPVRSNHSHYI Trigger: TATATAATGGGAATGATTAGAACGGACAGGCATTCAATAAACCTTGCCTAGCTCTTTCCATTTCACCAGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS GCA 72 bp | CAACTTTTGGGAATTCTTTCAGGTGAGGAAATCCAATaGAATGGTCTGTTACTTTTCTCAGGCATTATTCTT | + |
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Preference number: 6 (lower is better) Translates to: QLLGILSGEEIQ*NGLLLFSGIIL Trigger: AAGAATAATGCCTGAGAAAAGTAACAGACCATTGCATTGGATTTCCTCACCTGAAAGAATTCCCAAAAGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CCA 72 bp | ACAGAAAATCAAATACTGCCTGTTCTCACTTATAAGTaGGAACTGAATGATGAGAACATATGGACACATTGG | + |
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Preference number: 6 (lower is better) Translates to: TENQILPVLTYK*ELNDENIWTHW Trigger: CCAATGTGTCCATATGTTCTCATCATTCAGTTCCCACTTATAAGTGAGAACAGGCAGTATTTGATTTTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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| CDS CCA 72 bp | AAAATCTACAACACGAGTGAAGAGTCATCAATGTGTTaGGTTAGCTTAAAATTAAGTGTCGATGATTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: KIYNTSEESSMC*VSLKLSVDDCW Trigger: CCAACAATCATCGACACTTAATTTTAAGCTAACCCAACACATTGATGACTCTTCACTCGTGTTGTAGATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482095.1 |
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