RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RGS12 (Homo sapiens)

Ensembl gene IDs: ENSG00000159788

Ensembl transcript IDs: ENST00000336727.7, ENST00000338806.4, ENST00000344733.9, ENST00000382788.7, ENST00000502947.1, ENST00000503041.5, ENST00000504194.5, ENST00000504559.1, ENST00000505570.5, ENST00000506631.5, ENST00000506998.5, ENST00000507041.5, ENST00000507246.5, ENST00000508158.5, ENST00000509746.5, ENST00000509772.1, ENST00000510803.1, ENST00000511709.5, ENST00000511805.5, ENST00000512266.5, ENST00000512990.5, ENST00000513784.7, ENST00000513991.5, ENST00000514268.5, ENST00000515521.5, ENST00000643191.1

Found 1211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCTaGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGG +
Preference number: 1 (lower is better)
Translates to: HRRGPAAGAQRTRPS*RPSSHAGAGSSARW
Trigger: CCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR GCA 90 bp GAGCACCCACACCACCTGCTACGGGGGCCGCCGGTGGGTCCGAGCTaGACTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTGGGAGCC +
Preference number: 1 (lower is better)
Translates to: EHPHHLLRGPPVGPS*TLKALPRTGLCLGA
Trigger: GGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTGGTGTGGGTGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 90 bp CCTCCACTCCCGAGCACCCACACCACCTGCTACGGGGGCCGCCGGTaGGTCCGAGCTGCACTCTCAAGGCTCTTCCGAGGACGGGCCTGT +
Preference number: 1 (lower is better)
Translates to: PPLPSTHTTCYGGRR*VRAALSRLFRGRAC
Trigger: ACAGGCCCGTCCTCGGAAGAGCCTTGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTGGTGTGGGTGCTCGGGAGTGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 90 bp AGAGCGCTGCTGACGTCACCTCCACTCCCGAGCACCCACACCACCTaGTACGGGGGCCGCCGGTGGGTCCGAGCTGCACTCTCAAGGCTC +
Preference number: 1 (lower is better)
Translates to: RALLTSPPLPSTHTT*YGGRRWVRAALSRL
Trigger: GAGCCTTGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTGGTGTGGGTGCTCGGGAGTGGAGGTGACGTCAGCAGCGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 90 bp GTGCTTGGAAGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTaGACGGCCCTCCACTTCCGCCAGGATGCATTCCTGGTACAGCGG +
Preference number: 1 (lower is better)
Translates to: VLGSRAAGDLLRVRE*TALHFRQDAFLVQR
Trigger: CCGCTGTACCAGGAATGCATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCTTCCAAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR CCA 90 bp CCTCTCTCCAGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTaGAAACACCTTTCCCTACCGGCTGCTGGGAGCCTCGCCTCAGTT +
Preference number: 1 (lower is better)
Translates to: PLSRGWPRRPRPSDP*KHLSLPAAGSLASV
Trigger: AACTGAGGCGAGGCTCCCAGCAGCCGGTAGGGAAAGGTGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 90 bp GGAGGGGGACTCAGGCCAGGGGTGGAGGCTGCAGAGTGGCACCGGTaGGCATGCCAGGCACCTCAGGCTTTCTCATCCAGGCGTGTCCTG +
Preference number: 1 (lower is better)
Translates to: GGGLRPGVEAAEWHR*ACQAPQAFSSRRVL
Trigger: CAGGACACGCCTGGATGAGAAAGCCTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCCCTGGCCTGAGTCCCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 90 bp CACAGGTGTCCACCAAGACGGATGGAGGGGGACTCAGGCCAGGGGTaGAGGCTGCAGAGTGGCACCGGTGGGCATGCCAGGCACCTCAGG +
Preference number: 1 (lower is better)
Translates to: HRCPPRRMEGDSGQG*RLQSGTGGHARHLR
Trigger: CCTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCCCTGGCCTGAGTCCCCCTCCATCCGTCTTGGTGGACACCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 90 bp CACTGGAGTGGTCTGAACCGAGGCTGTGCTTGGAAGCCGGGCTGCTaGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCG +
Preference number: 1 (lower is better)
Translates to: HWSGLNRGCAWKPGC*GPAASPGVHGPPLP
Trigger: CGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCTTCCAAGCACAGCCTCGGTTCAGACCACTCCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR GCA 90 bp GTCCACCAAGACGGATGGAGGGGGACTCAGGCCAGGGGTGGAGGCTaGAGAGTGGCACCGGTGGGCATGCCAGGCACCTCAGGCTTTCTC +
Preference number: 1 (lower is better)
Translates to: VHQDGWRGTQARGGG*RVAPVGMPGTSGFL
Trigger: GAGAAAGCCTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCCCTGGCCTGAGTCCCCCTCCATCCGTCTTGGTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR TCA 90 bp CATCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTaGGCACACTCCATGACGCGCACCCTGAGCGGCTCCTCTCTCCAG +
Preference number: 1 (lower is better)
Translates to: HRPQQQTTAEVSTHP*AHSMTRTLSGSSLQ
Trigger: CTGGAGAGAGGAGCCGCTCAGGGTGCGCGTCATGGAGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 90 bp ACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTaGACCAGGGCACAGGACGGAGAGGCGCTCCCATCGCCCCCAGCA +
Preference number: 1 (lower is better)
Translates to: TRPNLTAGLSLLSAS*TRAQDGEALPSPPA
Trigger: TGCTGGGGGCGATGGGAGCGCCTCTCCGTCCTGTGCCCTGGTCCAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR TCA 90 bp GAGACCACCAGCAAACAGTGGCAGCCGGGGGCCCACTGTCCTTTCTaGCTGGAAGCTGAGCAGACCACGCTTACGGGGCCAAGGTGGAGG +
Preference number: 1 (lower is better)
Translates to: ETTSKQWQPGAHCPF*LEAEQTTLTGPRWR
Trigger: CCTCCACCTTGGCCCCGTAAGCGTGGTCTGCTCAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCGGCTGCCACTGTTTGCTGGTGGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 90 bp CCCCCAGGCCTCACCCAGGGTGTTCCCAGACCTCGCTGCAGGCACTaGCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCAGGATGC +
Preference number: 1 (lower is better)
Translates to: PPGLTQGVPRPRCRH*HVSFLQEPLRTPGC
Trigger: GCATCCTGGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGGTCTGGGAACACCCTGGGTGAGGCCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR TCA 90 bp AGACGTGCACTCCCTGGTCCCCCGGCGAGGTCCAGGCTACAGGTCTaGCAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCAT +
Preference number: 1 (lower is better)
Translates to: RRALPGPPARSRLQV*QDQTSRQASHCCQH
Trigger: ATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGACCTCGCCGGGGGACCAGGGAGTGCACGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR TCA 90 bp CATGCCAGGCACCTCAGGCTTTCTCATCCAGGCGTGTCCTGGCTGTaGAAGGGACCAGGTAGCCCCTCCCATGCCACACGTGGCCTCCAA +
Preference number: 1 (lower is better)
Translates to: HARHLRLSHPGVSWL*KGPGSPSHATRGLQ
Trigger: TTGGAGGCCACGTGTGGCATGGGAGGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCCTGGATGAGAAAGCCTGAGGTGCCTGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 90 bp CAGGCCACGGCCCTCGGACCCCTGGAAACACCTTTCCCTACCGGCTaGTGGGAGCCTCGCCTCAGTTTCTGGTATTTGTGGCTCACGGAA +
Preference number: 1 (lower is better)
Translates to: QATALGPLETPFPTG*WEPRLSFWYLWLTE
Trigger: TTCCGTGAGCCACAAATACCAGAAACTGAGGCGAGGCTCCCAGCAGCCGGTAGGGAAAGGTGTTTCCAGGGGTCCGAGGGCCGTGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 90 bp CCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATaGATTCCTGGTACAGCGGGGACTTCAGAAAGCGAGTGTAGCTAT +
Preference number: 1 (lower is better)
Translates to: PAASPGVHGPPLPPG*IPGTAGTSESECSY
Trigger: ATAGCTACACTCGCTTTCTGAAGTCCCCGCTGTACCAGGAATGCATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR CCA 90 bp GTCCGAGCTGCACTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTaGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACTTCCTCA +
Preference number: 1 (lower is better)
Translates to: VRAALSRLFRGRACV*EPSPAMNTAGFTSS
Trigger: TGAGGAAGTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAGTGCAGCTCGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 90 bp TTTCGGAAACCCCCAGGCCTCACCCAGGGTGTTCCCAGACCTCGCTaGAGGCACTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACA +
Preference number: 1 (lower is better)
Translates to: FRKPPGLTQGVPRPR*RHCHVSFLQEPLRT
Trigger: TGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGGTCTGGGAACACCCTGGGTGAGGCCTGGGGGTTTCCGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 90 bp CACACGTGGCCTCCAAAGGCCCAGATATGTACAGATCTACAGACGTaGACTCCCTGGTCCCCCGGCGAGGTCCAGGCTACAGGTCTGACA +
Preference number: 1 (lower is better)
Translates to: HTWPPKAQICTDLQT*TPWSPGEVQATGLT
Trigger: TGTCAGACCTGTAGCCTGGACCTCGCCGGGGGACCAGGGAGTGCACGTCTGTAGATCTGTACATATCTGGGCCTTTGGAGGCCACGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR TCA 90 bp ACCTTCACACTCACTGAATCCCCTGCTTCCTTTGAGAAATGCCCGTaGCACCCGCGGTCAGAGAGCGCTGCTGACGTCACCTCCACTCCC +
Preference number: 1 (lower is better)
Translates to: TFTLTESPASFEKCP*HPRSESAADVTSTP
Trigger: GGGAGTGGAGGTGACGTCAGCAGCGCTCTCTGACCGCGGGTGTCACGGGCATTTCTCAAAGGAAGCAGGGGATTCAGTGAGTGTGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR TCA 90 bp ATGAGATTGAAGATCTGCAGCTGCTGCTCCTTGAACATGTCTGGGTaGGGTGCGCGGAGGACGTCGTCTGCTAGCTGGGCCTGGCTGTCG +
Preference number: 1 (lower is better)
Translates to: MRLKICSCCSLNMSG*GARRTSSASWAWLS
Trigger: CGACAGCCAGGCCCAGCTAGCAGACGACGTCCTCCGCGCACCTCACCCAGACATGTTCAAGGAGCAGCAGCTGCAGATCTTCAATCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR CCA 90 bp GAAACACCTTTCCCTACCGGCTGCTGGGAGCCTCGCCTCAGTTTCTaGTATTTGTGGCTCACGGAAACATCCCTGCTGCCAGGCCATCCT +
Preference number: 1 (lower is better)
Translates to: ETPFPTGCWEPRLSF*YLWLTETSLLPGHP
Trigger: AGGATGGCCTGGCAGCAGGGATGTTTCCGTGAGCCACAAATACCAGAAACTGAGGCGAGGCTCCCAGCAGCCGGTAGGGAAAGGTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 90 bp CCTCCAAAGGCCCAGATATGTACAGATCTACAGACGTGCACTCCCTaGTCCCCCGGCGAGGTCCAGGCTACAGGTCTGACAAGACCAAAC +
Preference number: 1 (lower is better)
Translates to: PPKAQICTDLQTCTP*SPGEVQATGLTRPN
Trigger: GTTTGGTCTTGTCAGACCTGTAGCCTGGACCTCGCCGGGGGACCAGGGAGTGCACGTCTGTAGATCTGTACATATCTGGGCCTTTGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 90 bp CTCGCCTCAGTTTCTGGTATTTGTGGCTCACGGAAACATCCCTGCTaGCAGGCCATCCTGTTCACCTTCACACTCACTGAATCCCCTGCT +
Preference number: 1 (lower is better)
Translates to: LASVSGICGSRKHPC*QAILFTFTLTESPA
Trigger: AGCAGGGGATTCAGTGAGTGTGAAGGTGAACAGGATGGCCTGGCAGCAGGGATGTTTCCGTGAGCCACAAATACCAGAAACTGAGGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR TCA 90 bp TGTCCAGAATTTATTACTCCTGGAAGAACAGACTCAAAACGCAGGTaGGAGCCACACAGGTGTCCACCAAGACGGATGGAGGGGGACTCA +
Preference number: 1 (lower is better)
Translates to: CPEFITPGRTDSKRR*EPHRCPPRRMEGDS
Trigger: TGAGTCCCCCTCCATCCGTCTTGGTGGACACCTGTGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATAAATTCTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR GCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCAGGCGCCGGCAGCTCTaGACGCTGGGGAGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: AGLLGTCCESGSARPSTSRRRQL*TLGRLA
Trigger: TGCCAGCCTCCCCAGCGTGCAGAGCTGCCGGCGCCT...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCCTGGCTGGGCTCCTaGGGGTGTGGTGGCCAGGGT +
Preference number: 2 (lower is better)
Translates to: REPHGQHGECPGPVPPARSWLGS*GCGGQG
Trigger: ACCCTGGCCACCACACCCTCAGGAGCCCAGCCAGGA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
3UTR-3UTR GCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCACACCGACGGGGTCCTaGAGCAGGCGCTCAAAGGAC +
Preference number: 2 (lower is better)
Translates to: AGLLGTCCESGSARPSTSTPTGS*SRRSKD
Trigger: GTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGT...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCCCTGCCCTCCTGGCTaGGCTCCTGAGGGTGTGGTG +
Preference number: 2 (lower is better)
Translates to: REPHGQHGECPGPVPPARPCPPG*APEGVV
Trigger: CACCACACCCTCAGGAGCCCAGCCAGGAGGGCAGGG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
3UTR-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCCCTGCCCTCCTGGCTaGGCTCCTGAGGGTGTGGTG +
Preference number: 2 (lower is better)
Translates to: QGAPWPAWRMSGASASSEPCPPG*APEGVV
Trigger: CACCACACCCTCAGGAGCCCAGCCAGGAGGGCAGGG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
3UTR-3UTR TCA 90 bp GGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACACCTTTCCCTACCGCCCCCAACCAGCAGGTaGGGAGGGGGTCACGGAGAC +
Preference number: 2 (lower is better)
Translates to: GWPRRPRPSDPWKHLSLPPPTSR*GGGHGD
Trigger: GTCTCCGTGACCCCCTCCTCACCTGCTGGTTGGGGG...CGGTAGGGAAAGGTGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCCCACAGAATCCACCTaGGCTGCCCCACCCCGACAT +
Preference number: 2 (lower is better)
Translates to: GQGAPWPAWRMSGASASSPTEST*AAPPRH
Trigger: ATGTCGGGGTGGGGCAGCCCAGGTGGATTCTGTGGG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
3UTR-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCCCACAGAATCCACCTaGGCTGCCCCACCCCGACAT +
Preference number: 2 (lower is better)
Translates to: AREPHGQHGECPGPVPPAPTEST*AAPPRH
Trigger: ATGTCGGGGTGGGGCAGCCCAGGTGGATTCTGTGGG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
3UTR-3UTR CCA 90 bp CCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGTCTGCTAGCTGGGCCTaGCTGTCGATGTTGACCGGG +
Preference number: 2 (lower is better)
Translates to: PGCWGPAASPGVHGPPLPSASWA*LSMLTG
Trigger: CCCGGTCAACATCGACAGCCAGGCCCAGCTAGCAGA...CGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCCCACAGAATCCACCTaGGCTGCCCCACCCCGACAT +
Preference number: 2 (lower is better)
Translates to: GSPMASMANVRGQCLQRGPTEST*AAPPRH
Trigger: ATGTCGGGGTGGGGCAGCCCAGGTGGATTCTGTGGG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
3UTR-3UTR CCA 90 bp GGGTGGAGGCTGCAGAGTGGCACCGGTGGGCATGCCAGGCACCTCAGGCTTTCTTACGGGGGCCGCCGGTaGGTCCGAGCTGCACTCTCA +
Preference number: 2 (lower is better)
Translates to: GWRLQSGTGGHARHLRLSYGGRR*VRAALS
Trigger: TGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTA...AGAAAGCCTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR CCA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCGGCAGCTCTGCACGCTaGGGAGGCTGGCATTGCTGC +
Preference number: 2 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSGSSAR*GGWHCC
Trigger: GCAGCAATGCCAGCCTCCCCAGCGTGCAGAGCTGCC...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR CCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCACGTCGTCTGCTAGCTaGGCCTGGCTGTCGATGTTG +
Preference number: 2 (lower is better)
Translates to: AGLLGTCCESGSARPSTSTSSAS*AWLSML
Trigger: CAACATCGACAGCCAGGCCCAGCTAGCAGACGACGT...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR CCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCCTCCTTGAACATGTCTaGGTGAGGTGCGCGGAGGAC +
Preference number: 2 (lower is better)
Translates to: AGLLGTCCESGSARPSTSLLEHV*VRCAED
Trigger: GTCCTCCGCGCACCTCACCCAGACATGTTCAAGGAG...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR TCA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGCAGCTGCTGCTCCTTaGACATGTCTGGGTGAGGTG +
Preference number: 2 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPAAAAP*TCLGEV
Trigger: CACCTCACCCAGACATGTTCAAGGAGCAGCAGCTGC...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR CCA 90 bp GCACACTCCATGACGCGCACCCTGAGCGGCTCCTCTCTCCAGGGGATGGCCACGCGGCCCTCGGACCCCTaGAAACACCTTTCCCTACCG +
Preference number: 2 (lower is better)
Translates to: AHSMTRTLSGSSLQGMATRPSDP*KHLSLP
Trigger: CGGTAGGGAAAGGTGTTTCCAGGGGTCCGAGGGCCG...CGTGGCCATCCCCTGGAGAGAGGAGCCGCTCAGGGTGCGCGTCATGGAGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR CCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGCATTCCTaGTACAGCGGGGACTTCAGA +
Preference number: 2 (lower is better)
Translates to: AGLLGTCCESGSARPSTSARMHS*YSGDFR
Trigger: TCTGAAGTCCCCGCTGTACCAGGAATGCATCCTGGC...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR TCA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTTCAGGCTGTTGTTGCTaGCGCAGTCCTTCAGGTCGG +
Preference number: 2 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAASGCCC*RSPSGR
Trigger: CCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGA...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR GCA 90 bp CCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGAAGATCTGCAGCTGCTaGTCCTTGAACATGTCTGGG +
Preference number: 2 (lower is better)
Translates to: PGCWGPAASPGVHGPPLPKICSC*SLNMSG
Trigger: CCCAGACATGTTCAAGGAGCAGCAGCTGCAGATCTT...CGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR CCA 90 bp TCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTCACCACCAGCAAACAGTaGCAGCCGGGGGCCCACTGT +
Preference number: 2 (lower is better)
Translates to: SPPAANHSRGVHAPLSTLTTSKQ*QPGAHC
Trigger: ACAGTGGGCCCCCGGCTGCCACTGTTTGCTGGTGGT...GAGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR TCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGTGCAGAGAAACTTACTaGAAATCTCCCGGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: LGTCCESGSARPSTSARMCRETY*KSPGPC
Trigger: ACAGGGCCCGGGAGATTTTCAGTAAGTTTCTCTGCA...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR GCA 90 bp TCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTCCTGGGAGCCCTCTCCTaGTATGAACACAGCGGGCTT +
Preference number: 2 (lower is better)
Translates to: SPPAANHSRGVHAPLSTLLGALS*YEHSGL
Trigger: AAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAG...GAGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR GCA 90 bp CCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGATGAGATTGAAGATCTaGAGCTGCTGCTCCTTGAAC +
Preference number: 2 (lower is better)
Translates to: PGCWGPAASPGVHGPPLPMRLKI*SCCSLN
Trigger: GTTCAAGGAGCAGCAGCTGCAGATCTTCAATCTCAT...CGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR TCA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCATCATGTGCAGGAACATaGTTAAAATATTCACAGGCC +
Preference number: 2 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPSCAGT*LKYSQA
Trigger: GGCCTGTGAATATTTTAATCATGTTCCTGCACATGA...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR GCA 90 bp TTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGGACCAGGTAGCCCCTCCCATGGTTCCCAGACCTCGCTaGAGGCACTGCCACGTATCA +
Preference number: 2 (lower is better)
Translates to: FLIQACPGCERDQVAPPMVPRPR*RHCHVS
Trigger: TGATACGTGGCAGTGCCTGCAGCGAGGTCTGGGAAC...CATGGGAGGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCCTGGATGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR TCA 90 bp GGTAGCCCCTCCCATGCCACACGTGGCCTCCAAAGGCCCAGATATGTACAGATCTCCAGGCTACAGGTCTaGCAAGACCAAACCTCACGG +
Preference number: 2 (lower is better)
Translates to: GSPSHATRGLQRPRYVQISRLQV*QDQTSR
Trigger: CCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGA...GATCTGTACATATCTGGGCCTTTGGAGGCCACGTGTGGCATGGGAGGGGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR GCA 90 bp GGTAGCCCCTCCCATGCCACACGTGGCCTCCAAAGGCCCAGATATGTACAGATCCCTCGCTGCAGGCACTaGCACGTATCATTCCTGCAA +
Preference number: 2 (lower is better)
Translates to: GSPSHATRGLQRPRYVQIPRCRH*HVSFLQ
Trigger: TTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGG...GATCTGTACATATCTGGGCCTTTGGAGGCCACGTGTGGCATGGGAGGGGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR GCA 90 bp GGGTGGAGGCTGCAGAGTGGCACCGGTGGGCATGCCAGGCACCTCAGGCTTTCTCTCACTCAAGACAAATaGTATTGTTTTCCAGTCTTG +
Preference number: 2 (lower is better)
Translates to: GWRLQSGTGGHARHLRLSLTQDK*YCFPVL
Trigger: CAAGACTGGAAAACAATAGCATTTGTCTTGAGTGAG...AGAAAGCCTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR GCA 90 bp TGTTCACCTTCACACTCACTGAATCCCCTGCTTCCTTTGAGAAATGCCCGTGACGCCACGTATCATTCCTaGAAGAGCCTCTCAGGACAC +
Preference number: 2 (lower is better)
Translates to: CSPSHSLNPLLPLRNARDATYHS*KSLSGH
Trigger: GTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGC...GTCACGGGCATTTCTCAAAGGAAGCAGGGGATTCAGTGAGTGTGAAGGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR CCA 90 bp AGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGATCGCTGTCCAGATTTaGAAAGGAATGCCTCCATTT +
Preference number: 2 (lower is better)
Translates to: RSDKTKPHGRPLTAVSILIAVQI*KGMPPF
Trigger: AAATGGAGGCATTCCTTTCCAAATCTGGACAGCGAT...CAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR TCA 90 bp AGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGATTTGGAAAGGAATGGCCCACTGTCCTTTCTaGCTGGAAGCTGAGCAGACC +
Preference number: 2 (lower is better)
Translates to: SLETETLKTIAVQIWKGMAHCPF*LEAEQT
Trigger: GGTCTGCTCAGCTTCCAGTCAGAAAGGACAGTGGGC...CATTCCTTTCCAAATCTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR GCA 90 bp CAGTCCAGTGATGATGTCCAGAATTTATTACTCCTGGAAGAACAGACTCAAAACCGGAAACATCCCTGCTaGCAGGCCATCCTGTTCACC +
Preference number: 2 (lower is better)
Translates to: QSSDDVQNLLLLEEQTQNRKHPC*QAILFT
Trigger: GGTGAACAGGATGGCCTGGCAGCAGGGATGTTTCCG...GTTTTGAGTCTGTTCTTCCAGGAGTAATAAATTCTGGACATCATCACTGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR TCA 90 bp ATGCTATTGTTTTCCAGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGTTTCTGACTGGAAGCTaGGCAGACCACGCTTACGGG +
Preference number: 2 (lower is better)
Translates to: MLLFSSLETETLKTIAVQFLTGS*ADHAYG
Trigger: CCCGTAAGCGTGGTCTGCTCAGCTTCCAGTCAGAAA...CTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACTGGAAAACAATAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR CCA 90 bp CAGTCCAGTGATGATGTCCAGAATTTATTACTCCTGGAAGAACAGACTCAAAACACTGTCCTTTCTGACTaGAAGCTGAGCAGACCACGC +
Preference number: 2 (lower is better)
Translates to: QSSDDVQNLLLLEEQTQNTVLSD*KLSRPR
Trigger: GCGTGGTCTGCTCAGCTTCCAGTCAGAAAGGACAGT...GTTTTGAGTCTGTTCTTCCAGGAGTAATAAATTCTGGACATCATCACTGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 72 bp ATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTaGCCTCCTGGCTGGGCTCCTGAGGGTGTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: MSGASASSEVTP*PPGWAPEGVVA
Trigger: GGCCACCACACCCTCAGGAGCCCAGCCAGGAGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
3UTR GCA 72 bp CTGACGTCACCTCCACTCCCGAGCACCCACACCACCTaGTACGGGGGCCGCCGGTGGGTCCGAGCTGCACTC +
Preference number: 3 (lower is better)
Translates to: LTSPPLPSTHTT*YGGRRWVRAAL
Trigger: GAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTGGTGTGGGTGCTCGGGAGTGGAGGTGACGTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 72 bp GGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCTaGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCT +
Preference number: 3 (lower is better)
Translates to: GPAAGAQRTRPS*RPSSHAGAGSS
Trigger: AGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR CAA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGCCTGGCTGTCGATGTaGACCGGGGTGGTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPAWLSM*TGVVAL
Trigger: CAAAGCCACCACCCCGGTCAACATCGACAGCCAGGC...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR GCA 72 bp CACCACCTGCTACGGGGGCCGCCGGTGGGTCCGAGCTaGACTCTCAAGGCTCTTCCGAGGACGGGCCTGTGT +
Preference number: 3 (lower is better)
Translates to: HHLLRGPPVGPS*TLKALPRTGLC
Trigger: ACACAGGCCCGTCCTCGGAAGAGCCTTGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 72 bp AGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTaGAAACACCTTTCCCTACCGGCTGCTGGGAGCCTC +
Preference number: 3 (lower is better)
Translates to: RGWPRRPRPSDP*KHLSLPAAGSL
Trigger: GAGGCTCCCAGCAGCCGGTAGGGAAAGGTGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 72 bp CCACCAAGACGGATGGAGGGGGACTCAGGCCAGGGGTaGAGGCTGCAGAGTGGCACCGGTGGGCATGCCAGG +
Preference number: 3 (lower is better)
Translates to: PPRRMEGDSGQG*RLQSGTGGHAR
Trigger: CCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCCCTGGCCTGAGTCCCCCTCCATCCGTCTTGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 72 bp GGTCTGAACCGAGGCTGTGCTTGGAAGCCGGGCTGCTaGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCT +
Preference number: 3 (lower is better)
Translates to: GLNRGCAWKPGC*GPAASPGVHGP
Trigger: AGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCTTCCAAGCACAGCCTCGGTTCAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR CAA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCCTGCTCAGGCTGTTGTaGCTGACGCAGTCCTTCAGG +
Preference number: 3 (lower is better)
Translates to: AGLLGTCCESGSARPSTSLLRLL*LTQSFR
Trigger: CCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAG...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR-3UTR CAA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCTTGCTGCTCAGGCTGTaGTTGCTGACGCAGTCCTTC +
Preference number: 3 (lower is better)
Translates to: AGLLGTCCESGSARPSTSLLLRL*LLTQSF
Trigger: GAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAA...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR TCA 72 bp GCAGCCGGGGGCCCACTGTCCTTTCTGACTGGAAGCTaGGCAGACCACGCTTACGGGGCCAAGGTGGAGGGA +
Preference number: 3 (lower is better)
Translates to: AAGGPLSFLTGS*ADHAYGAKVEG
Trigger: TCCCTCCACCTTGGCCCCGTAAGCGTGGTCTGCTCAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCGGCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR TCA 72 bp GAAATGCCCGTGACACCCGCGGTCAGAGAGCGCTGCTaGCGTCACCTCCACTCCCGAGCACCCACACCACCT +
Preference number: 3 (lower is better)
Translates to: EMPVTPAVRERC*RHLHSRAPTPP
Trigger: AGGTGGTGTGGGTGCTCGGGAGTGGAGGTGACGTCAGCAGCGCTCTCTGACCGCGGGTGTCACGGGCATTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR TCA 72 bp CAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTaGGCACACTCCATGACGCGCACCCTGAGCGGCTCC +
Preference number: 3 (lower is better)
Translates to: QQQTTAEVSTHP*AHSMTRTLSGS
Trigger: GGAGCCGCTCAGGGTGCGCGTCATGGAGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR TCA 72 bp CTCCCTGGTCCCCCGGCGAGGTCCAGGCTACAGGTCTaGCAAGACCAAACCTCACGGCAGGCCTCTCACTGC +
Preference number: 3 (lower is better)
Translates to: LPGPPARSRLQV*QDQTSRQASHC
Trigger: GCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGACCTCGCCGGGGGACCAGGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 72 bp AACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTaGACCAGGGCACAGGACGGAGAGGCGCTCCCATCG +
Preference number: 3 (lower is better)
Translates to: NLTAGLSLLSAS*TRAQDGEALPS
Trigger: CGATGGGAGCGCCTCTCCGTCCTGTGCCCTGGTCCAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 72 bp CCCCCAGGCCTCACCCAGGGTGTTCCCAGACCTCGCTaGAGGCACTGCCACGTATCATTCCTGCAAGAGCCT +
Preference number: 3 (lower is better)
Translates to: PPGLTQGVPRPR*RHCHVSFLQEP
Trigger: AGGCTCTTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGGTCTGGGAACACCCTGGGTGAGGCCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR-3UTR CAA 90 bp CCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGTCAAACTTCATGAGATaGAAGATCTGCAGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: PGCWGPAASPGVHGPPLPSNFMR*KICSCC
Trigger: GCAGCAGCTGCAGATCTTCAATCTCATGAAGTTTGA...CGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR TCA 72 bp AGCAAACAGTGGCAGCCGGGGGCCCACTGTCCTTTCTaGCTGGAAGCTGAGCAGACCACGCTTACGGGGCCA +
Preference number: 3 (lower is better)
Translates to: SKQWQPGAHCPF*LEAEQTTLTGP
Trigger: TGGCCCCGTAAGCGTGGTCTGCTCAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCGGCTGCCACTGTTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 72 bp AGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATaGATTCCTGGTACAGCGGGGACTTCAGAAAGCGAG +
Preference number: 3 (lower is better)
Translates to: SPGVHGPPLPPG*IPGTAGTSESE
Trigger: CTCGCTTTCTGAAGTCCCCGCTGTACCAGGAATGCATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR CCA 72 bp AACAGTGGCAGCCGGGGGCCCACTGTCCTTTCTGACTaGAAGCTGAGCAGACCACGCTTACGGGGCCAAGGT +
Preference number: 3 (lower is better)
Translates to: NSGSRGPTVLSD*KLSRPRLRGQG
Trigger: ACCTTGGCCCCGTAAGCGTGGTCTGCTCAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCGGCTGCCACTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 72 bp GCACTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTaGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTC +
Preference number: 3 (lower is better)
Translates to: ALSRLFRGRACV*EPSPAMNTAGF
Trigger: GAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR TCA 72 bp AAGATCTGCAGCTGCTGCTCCTTGAACATGTCTGGGTaGGGTGCGCGGAGGACGTCGTCTGCTAGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: KICSCCSLNMSG*GARRTSSASWA
Trigger: GGCCCAGCTAGCAGACGACGTCCTCCGCGCACCTCACCCAGACATGTTCAAGGAGCAGCAGCTGCAGATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
3UTR GCA 72 bp GCCCTCGGACCCCTGGAAACACCTTTCCCTACCGGCTaGTGGGAGCCTCGCCTCAGTTTCTGGTATTTGTGG +
Preference number: 3 (lower is better)
Translates to: ALGPLETPFPTG*WEPRLSFWYLW
Trigger: CCACAAATACCAGAAACTGAGGCGAGGCTCCCAGCAGCCGGTAGGGAAAGGTGTTTCCAGGGGTCCGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR TCA 72 bp CTCACTGAATCCCCTGCTTCCTTTGAGAAATGCCCGTaGCACCCGCGGTCAGAGAGCGCTGCTGACGTCACC +
Preference number: 3 (lower is better)
Translates to: LTESPASFEKCP*HPRSESAADVT
Trigger: GGTGACGTCAGCAGCGCTCTCTGACCGCGGGTGTCACGGGCATTTCTCAAAGGAAGCAGGGGATTCAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 72 bp CTCACCCAGGGTGTTCCCAGACCTCGCTGCAGGCACTaGCACGTATCATTCCTGCAAGAGCCTCTCAGGACA +
Preference number: 3 (lower is better)
Translates to: LTQGVPRPRCRH*HVSFLQEPLRT
Trigger: TGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGGTCTGGGAACACCCTGGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 72 bp CCTCCAAAGGCCCAGATATGTACAGATCTACAGACGTaGACTCCCTGGTCCCCCGGCGAGGTCCAGGCTACA +
Preference number: 3 (lower is better)
Translates to: PPKAQICTDLQT*TPWSPGEVQAT
Trigger: TGTAGCCTGGACCTCGCCGGGGGACCAGGGAGTGCACGTCTGTAGATCTGTACATATCTGGGCCTTTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 72 bp GCCCAGATATGTACAGATCTACAGACGTGCACTCCCTaGTCCCCCGGCGAGGTCCAGGCTACAGGTCTGACA +
Preference number: 3 (lower is better)
Translates to: AQICTDLQTCTP*SPGEVQATGLT
Trigger: TGTCAGACCTGTAGCCTGGACCTCGCCGGGGGACCAGGGAGTGCACGTCTGTAGATCTGTACATATCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 72 bp TTCCCTACCGGCTGCTGGGAGCCTCGCCTCAGTTTCTaGTATTTGTGGCTCACGGAAACATCCCTGCTGCCA +
Preference number: 3 (lower is better)
Translates to: FPTGCWEPRLSF*YLWLTETSLLP
Trigger: TGGCAGCAGGGATGTTTCCGTGAGCCACAAATACCAGAAACTGAGGCGAGGCTCCCAGCAGCCGGTAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR GCA 72 bp GTTTCTGGTATTTGTGGCTCACGGAAACATCCCTGCTaGCAGGCCATCCTGTTCACCTTCACACTCACTGAA +
Preference number: 3 (lower is better)
Translates to: VSGICGSRKHPC*QAILFTFTLTE
Trigger: TTCAGTGAGTGTGAAGGTGAACAGGATGGCCTGGCAGCAGGGATGTTTCCGTGAGCCACAAATACCAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR TCA 72 bp TTTATTACTCCTGGAAGAACAGACTCAAAACGCAGGTaGGAGCCACACAGGTGTCCACCAAGACGGATGGAG +
Preference number: 3 (lower is better)
Translates to: FITPGRTDSKRR*EPHRCPPRRME
Trigger: CTCCATCCGTCTTGGTGGACACCTGTGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CCA 72 bp GCCAGTCCAGTGATGATGTCCAGAATTTATTACTCCTaGAAGAACAGACTCAAAACGCAGGTGAGAGCCACA +
Preference number: 3 (lower is better)
Translates to: ASPVMMSRIYYS*KNRLKTQVRAT
Trigger: TGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATAAATTCTGGACATCATCACTGGACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCCGGGCACACGGCGCTaGAGGCCAGCTTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAPGTRR*RPASRP
Trigger: CGGCCGAGAAGCTGGCCTTCAGCGCCGTGTGCCCGG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCACCGTCCCACGCGCTaGCTCCGGGGCCGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSHRPTR*LRGRVC
Trigger: GCAGACACGGCCCCGGAGGCAGCGCGTGGGACGGTG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGAGGCGCCGGCAGCTCTaGACGCTGGGGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PGCWGPAASPGVHGPPLPRRRQL*TLGRLA
Trigger: TGCCAGCCTCCCCAGCGTGCAGAGCTGCCGGCGCCT...CGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTGGGCGGTGCCCTCCTaGGCGAGGGAGACGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSWAVPS*ARETGD
Trigger: GTCCCCCGTCTCCCTCGCGCAGGAGGGCACCGCCCA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCCTGTGCCCCCGCTATaGCACCATCCCGCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAPVPPL*HHPARA
Trigger: CGCCCGGGCGGGATGGTGGCATAGCGGGGGCACAGG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCACTGCTCGCCAGGCTaGGAGGCGCTCTCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSHCSPG*EALSRP
Trigger: CGGCCGGGAGAGCGCCTCCCAGCCTGGCGAGCAGTG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGGTCCTGGCACTTCCTaGGGGGTGGAGGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAGPGTS*GVEGGG
Trigger: GCCGCCGCCCTCCACCCCCCAGGAAGTGCCAGGACC...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCCGGGCACACGGCGCTaGAGGCCAGCTTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAAPGTRR*RPASRP
Trigger: CGGCCGAGAAGCTGGCCTTCAGCGCCGTGTGCCCGG...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCCGCGGCCGCCCCGTTaGTGCCATGCCGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAPRPPR*CHAAHR
Trigger: TCTGTGAGCGGCATGGCATCAACGGGGCGGCCGCGG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCCCGCAGGCGCCGCATaGAGCCGCGGATGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSPAGAA*SRGWLA
Trigger: TGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCCCGCAGGCGCCGCATaGAGCCGCGGATGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SRAAGDLLRVRECTALHFPAGAA*SRGWLA
Trigger: TGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGG...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCCTCCGGGGCCGTGTCTaGTCGAGCTCCCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: AGLLGTCCESGSARPSTSLRGRV*SSSHPG
Trigger: ACCTGGGTGGGAGCTCGAGCAGACACGGCCCCGGAG...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCGCCGGCAGCTCTaGACGCTGGGGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPARRRQL*TLGRLA
Trigger: TGCCAGCCTCCCCAGCGTGCAGAGCTGCCGGCGCCT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCCTGCGAGTCCGGGAGTaGACGGCCCTCCACTTCCGC +
Preference number: 4 (lower is better)
Translates to: AGLLGTCCESGSARPSTSLRVRE*TALHFR
Trigger: GCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAG...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCCTGTGCCCCCGCTATaGCACCATCCCGCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGPVPPL*HHPARA
Trigger: CGCCCGGGCGGGATGGTGGCATAGCGGGGGCACAGG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGGTCCTGGCACTTCCTaGGGGGTGGAGGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGGPGTS*GVEGGG
Trigger: GCCGCCGCCCTCCACCCCCCAGGAAGTGCCAGGACC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGGGAGCCAGCGCTGGTTaGAACCACAGCCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGGASAG*NHSQHP
Trigger: TGGGTGCTGGCTGTGGTTTCAACCAGCGCTGGCTCC...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGCCTGGCTGTCGATGTTaGCCGGGGTGGTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGPGCRC*PGWWLC
Trigger: GCAAAGCCACCACCCCGGTCAACATCGACAGCCAGG...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCCGCGGCCGCCCCGTTaGTGCCATGCCGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGPRPPR*CHAAHR
Trigger: TCTGTGAGCGGCATGGCATCAACGGGGCGGCCGCGG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCCGCGGCCGCCCCGTTaGTGCCATGCCGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPPRPPR*CHAAHR
Trigger: TCTGTGAGCGGCATGGCATCAACGGGGCGGCCGCGG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGCCGCAGCACCTCCGTaGCGGGCTTGGTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARAAAPP*RAWWAW
Trigger: CCAAGCCCACCAAGCCCGTCACGGAGGTGCTGCGGC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGCCGCAGCACCTCCGTaGCGGGCTTGGTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGAAAPP*RAWWAW
Trigger: CCAAGCCCACCAAGCCCGTCACGGAGGTGCTGCGGC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTCCTGGCTGGGCTCCTaGGGGTGTGGTGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPASWLGS*GCGGQG
Trigger: ACCCTGGCCACCACACCCTCAGGAGCCCAGCCAGGA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTCCTGGCTGGGCTCCTaGGGGTGTGGTGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSSWLGS*GCGGQG
Trigger: ACCCTGGCCACCACACCCTCAGGAGCCCAGCCAGGA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCCACCGTCCCACGCGCTaGCTCCGGGGCCGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSHRPTR*LRGRVC
Trigger: GCAGACACGGCCCCGGAGGCAGCGCGTGGGACGGTG...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCCTGGTGTGTCCGCACTaGCACTCCCGGAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: AGLLGTCCESGSARPSTSLVCPH*HSRSTW
Trigger: CCACGTGCTCCGGGAGTGGCAGTGCGGACACACCAG...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGGGGCTGCGCGAAGCTaGCCTCCACCCTGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAGAARS*PPPCSG
Trigger: ACCGCTACAGGGTGGAGGGCAGCTTCGCGCAGCCCC...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCGGGGCTGCGCGAAGCTaGCCTCCACCCTGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: SRAAGDLLRVRECTALHFGAARS*PPPCSG
Trigger: ACCGCTACAGGGTGGAGGGCAGCTTCGCGCAGCCCC...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGCATTCAGCGGGGGCTaGGCGAAGCTGCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPAFSGG*AKLPST
Trigger: GGTGGAGGGCAGCTTCGCGCAGCCCCCGCTGAATGC...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTAGGCGCCGGCAGCTCTaGACGCTGGGGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGRRRQL*TLGRLA
Trigger: TGCCAGCCTCCCCAGCGTGCAGAGCTGCCGGCGCCT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGACACCGACGGGGTCCTaGAGCAGGCGCTCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGTPTGS*SRRSKD
Trigger: GTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGT...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCTGCGAGTCCGGGAGTaGACGGCCCTCCACTTCCGC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSLRVRE*TALHFR
Trigger: GCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCTGCTGGGGACCTGCTaGGAGTCCGGGAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: SRAAGDLLRVRECTALHFLLGTC*ESGSAR
Trigger: CCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAG...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGGCTGCTGGGGACCTaGTGCGAGTCCGGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSGLLGT*CESGSA
Trigger: TGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCC...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCGGGCTGCTGGGGACCTaGTGCGAGTCCGGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SRAAGDLLRVRECTALHFGLLGT*CESGSA
Trigger: TGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCC...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTCTGGGACCTCCCGGTaGTCCTGGTCCGCGACCACG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPASGTSR*SWSATT
Trigger: CGTGGTCGCGGACCAGGAGCACCGGGAGGTCCCAGA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTGGACTGGCTCCCACTaGTCGCCAGGCTGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSWTGSH*SPGWEA
Trigger: CGCCTCCCAGCCTGGCGAGCAGTGGGAGCCAGTCCA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCCTGTGCCCCCGCTATaGCACCATCCCGCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPPVPPL*HHPARA
Trigger: CGCCCGGGCGGGATGGTGGCATAGCGGGGGCACAGG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CACCTGCTACGGGGGCCGCCGGTGGGTCCGAGCTGCACTCTCAAGGCTCTTCCGAGCACCCACACCACCTaGTACGGGGGCCGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: HLLRGPPVGPSCTLKALPSTHTT*YGGRRW
Trigger: CCACCGGCGGCCCCCGTAGCAGGTGGTGTGGGTGCT...CGGAAGAGCCTTGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCGACGGCCCAGGCAATaGGCGTTTGGAGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPARRPRQ*AFGGLP
Trigger: GGGGAGGCCTCCAAACGCCCATTGCCTGGGCCGTCG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCACTCCCGGAGCACGTaGACCGGGAGCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEHSRST*TGSQRW
Trigger: CCAGCGCTGGCTCCCGGTCCACGTGCTCCGGGAGTG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACTCCCGGAGCACGTaGACCGGGAGCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGHSRST*TGSQRW
Trigger: CCAGCGCTGGCTCCCGGTCCACGTGCTCCGGGAGTG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCACTCCCGGAGCACGTaGACCGGGAGCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAAHSRST*TGSQRW
Trigger: CCAGCGCTGGCTCCCGGTCCACGTGCTCCGGGAGTG...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTGGAAGCCGGGCTGCTaGGGACCTGCTGCGAGTCCG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSWKPGC*GPAASP
Trigger: CGGACTCGCAGCAGGTCCCCAGCAGCCCGGCTTCCA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGGTCCAGGCCGTATCTaGCCACCACGGGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAGPGRI*PPRAAA
Trigger: TGCTGCGGCCCGTGGTGGCCAGATACGGCCTGGACC...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCAGGGAGACGGGGGACTaGGGAGTGCAGAAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSRETGD*GVQKGP
Trigger: CGGGCCCTTCTGCACTCCCCAGTCCCCCGTCTCCCT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGAGACGGGGGACTaGGGAGTGCAGAAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPARETGD*GVQKGP
Trigger: CGGGCCCTTCTGCACTCCCCAGTCCCCCGTCTCCCT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGGTCCTGGCACTTCCTaGGGGGTGGAGGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPGPGTS*GVEGGG
Trigger: GCCGCCGCCCTCCACCCCCCAGGAAGTGCCAGGACC...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCCTGTCCCGAAAGCGTaGATCCGTAGCCGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SRAAGDLLRVRECTALHFPVPKA*IRSRPS
Trigger: GGAGGGCCGGCTACGGATTCACGCTTTCGGGACAGG...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp CCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGGCAGTGTGCCGCAGTTaGTGCTGGACCAGCCATCGG +
Preference number: 4 (lower is better)
Translates to: PGCWGPAASPGVHGPPLPAVCRS*CWTSHR
Trigger: CCGATGGCTGGTCCAGCATCAACTGCGGCACACTGC...CGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp GGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACACCTTTCCCTACCGGCCGCAGCACCTCCGTaGCGGGCTTGGTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GWPRRPRPSDPWKHLSLPAAAPP*RAWWAW
Trigger: CCAAGCCCACCAAGCCCGTCACGGAGGTGCTGCGGC...CGGTAGGGAAAGGTGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCCCGCAGGCGCCGCATaGAGCCGCGGATGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPPAGAA*SRGWLA
Trigger: TGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCTCCGGGGCCGTGTCTaGTCGAGCTCCCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPLRGRV*SSSHPG
Trigger: ACCTGGGTGGGAGCTCGAGCAGACACGGCCCCGGAG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGGGGCTGCGCGAAGCTaGCCTCCACCCTGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPGAARS*PPPCSG
Trigger: ACCGCTACAGGGTGGAGGGCAGCTTCGCGCAGCCCC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGCATTCAGCGGGGGCTaGGCGAAGCTGCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARAFSGG*AKLPST
Trigger: GGTGGAGGGCAGCTTCGCGCAGCCCCCGCTGAATGC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTAGGCGCCGGCAGCTCTaGACGCTGGGGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPRRRQL*TLGRLA
Trigger: TGCCAGCCTCCCCAGCGTGCAGAGCTGCCGGCGCCT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCCATGTCTGGGTGAGGTaGGCGGAGGACGTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: AGLLGTCCESGSARPSTSHVWVR*AEDVVC
Trigger: GCAGACGACGTCCTCCGCGCACCTCACCCAGACATG...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCTGCGAGTCCGGGAGTaGACGGCCCTCCACTTCCGC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGLRVRE*TALHFR
Trigger: GCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCTGCTGGGGACCTGCTaGGAGTCCGGGAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGLLGTC*ESGSAR
Trigger: CCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCTGCTGGGGACCTGCTaGGAGTCCGGGAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARLLGTC*ESGSAR
Trigger: CCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGGCTGCTGGGGACCTaGTGCGAGTCCGGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEGLLGT*CESGSA
Trigger: TGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCC...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCTTGGAAGCCGGGCTaGTGGGGACCTGCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSAWKPG*WGPAAS
Trigger: ACTCGCAGCAGGTCCCCAGCAGCCCGGCTTCCAAGC...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCGCTTGGAAGCCGGGCTaGTGGGGACCTGCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: SRAAGDLLRVRECTALHFAWKPG*WGPAAS
Trigger: ACTCGCAGCAGGTCCCCAGCAGCCCGGCTTCCAAGC...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTCTGGGACCTCCCGGTaGTCCTGGTCCGCGACCACG +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSESGTSR*SWSATT
Trigger: CGTGGTCGCGGACCAGGAGCACCGGGAGGTCCCAGA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCATGCAGGGCGTCGTCTaGGTGGTCCCCGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSMQGVV*VVPVLP
Trigger: AGGGAGCACGGGGACCACGCAGACGACGCCCTGCAT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCGCTCTCCCGGCCGTTaGCTGTGGCGCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPARSPGR*LWRFSC
Trigger: GCAAGAGAAGCGCCACAGGCAACGGCCGGGAGAGCG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTGGACTGGCTCCCACTaGTCGCCAGGCTGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEWTGSH*SPGWEA
Trigger: CGCCTCCCAGCCTGGCGAGCAGTGGGAGCCAGTCCA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTGGACTGGCTCCCACTaGTCGCCAGGCTGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPWTGSH*SPGWEA
Trigger: CGCCTCCCAGCCTGGCGAGCAGTGGGAGCCAGTCCA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTCCAGATCTGGGCGGTaGCCTCCTGCGCGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSSRSGR*PPARGR
Trigger: TCTCCCTCGCGCAGGAGGGCACCGCCCAGATCTGGA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCCCAGGGCCAGCCTGTaGCCCCGCTATGCCACCATC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARPRASL*PRYATI
Trigger: GATGGTGGCATAGCGGGGGCACAGGCTGGCCCTGGG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCCCAGGGCCAGCCTGTaGCCCCGCTATGCCACCATC +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEPRASL*PRYATI
Trigger: GATGGTGGCATAGCGGGGGCACAGGCTGGCCCTGGG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTAGCGAGGTCACCCCCTaGCCTCCTGGCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSEVTP*PPGWAP
Trigger: AGGAGCCCAGCCAGGAGGGCAGGGGGTGACCTCGCT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAATGTCCGGGGCCAGTaGCTCCAGCGAGGTCACCCC +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPANVRGQ*LQRGHP
Trigger: GGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACACTCCGCACCCTTaGGGGCGACGGCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGHTPHP*GRRPRQ
Trigger: TTGCCTGGGCCGTCGCCCCCAAGGGTGCGGAGTGTG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCACACTCCGCACCCTTaGGGGCGACGGCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAAHTPHP*GRRPRQ
Trigger: TTGCCTGGGCCGTCGCCCCCAAGGGTGCGGAGTGTG...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGCAGCTCTGCACGCTaGGGAGGCTGGCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSGSSAR*GGWHCC
Trigger: GCAGCAATGCCAGCCTCCCCAGCGTGCAGAGCTGCC...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCGGCAGCTCTGCACGCTaGGGAGGCTGGCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRAAGDLLRVRECTALHFGSSAR*GGWHCC
Trigger: GCAGCAATGCCAGCCTCCCCAGCGTGCAGAGCTGCC...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCAGGACACGGCCCAGCTaGCGACCCTCCTCTCACGCA +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSRTRPS*RPSSHA
Trigger: TGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGGAAGCCGGGCTGCTaGGGACCTGCTGCGAGTCCG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARWKPGC*GPAASP
Trigger: CGGACTCGCAGCAGGTCCCCAGCAGCCCGGCTTCCA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTGCAGAAGGGCCCGCTaGGAGACTTCTGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPCRRAR*ETSARG
Trigger: CCCCCGGGCAGAAGTCTCCCAGCGGGCCCTTCTGCA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGAGGGAGACGGGGGACTaGGGAGTGCAGAAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARRETGD*GVQKGP
Trigger: CGGGCCCTTCTGCACTCCCCAGTCCCCCGTCTCCCT...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GACACTGGCCTGGGGCCACACGAGCCCCTCCTTTCCAAGAGGGCCAAGGAAGCCGGTCCTGGCACTTCCTaGGGGGTGGAGGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: DTGLGPHEPLLSKRAKEAGPGTS*GVEGGG
Trigger: GCCGCCGCCCTCCACCCCCCAGGAAGTGCCAGGACC...GGCTTCCTTGGCCCTCTTGGAAAGGAGGGGCTCGTGTGGCCCCAGGCCAGTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCCCTGCCCTCCTGGCTaGGCTCCTGAGGGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGPCPPG*APEGVV
Trigger: CACCACACCCTCAGGAGCCCAGCCAGGAGGGCAGGG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGGCCAGGGAGCCCCATaGCCAGCATGGCGAATGTCC +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAGQGAP*PAWRMS
Trigger: GGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCTCCTCTCTCCAGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAGTGGAGGCTGCAGAGTaGCACCGGTGGGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: GSSLQGMATQATALGPLEVEAAE*HRWACQ
Trigger: CTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCAC...TTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGGTACAGGACAGAGATaGACTGCAGGACGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AGLLGTCCESGSARPSTSGTGQR*TAGRGG
Trigger: CCCTCCCCGTCCTGCAGTTCATCTCTGTCCTGTACC...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCAGTGTGCCGCAGTTaGTGCTGGACCAGCCATCGG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSAVCRS*CWTSHR
Trigger: CCGATGGCTGGTCCAGCATCAACTGCGGCACACTGC...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCCTGGCTGTCGATGTTaGCCGGGGTGGTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSPGCRC*PGWWLC
Trigger: GCAAAGCCACCACCCCGGTCAACATCGACAGCCAGG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCCTGGCTGTCGATGTTaGCCGGGGTGGTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAPGCRC*PGWWLC
Trigger: GCAAAGCCACCACCCCGGTCAACATCGACAGCCAGG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGCACACTGGAGTGGTCTaGACCGAGGCTGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGHTGVV*TEAVLG
Trigger: TCCAAGCACAGCCTCGGTTCAGACCACTCCAGTGTG...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCAGCCGCGGATGGCTTaGAAGCTGTCGGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSQPRMA*KLSDSR
Trigger: CCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCTGTCTGGGTCGGCCGTaGACTCAAACCCAAACCGCC +
Preference number: 4 (lower is better)
Translates to: AGLLGTCCESGSARPSTSCLGRP*TQTQTA
Trigger: GGCGGTTTGGGTTTGAGTGCACGGCCGACCCAGACA...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGAGGACAGAGATGAACTaGAGGACGGGGAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGRTEMN*RTGRED
Trigger: GTCCTCCCTCCCCGTCCTGCAGTTCATCTCTGTCCT...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp ACCCGCGGTCAGAGAGCGCTGCTGACGTCACCTCCACTCCCGAGCACCCACACCCTCCGGGGCCGTGTCTaGTCGAGCTCCCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: TRGQRALLTSPPLPSTHTLRGRV*SSSHPG
Trigger: ACCTGGGTGGGAGCTCGAGCAGACACGGCCCCGGAG...GGTGTGGGTGCTCGGGAGTGGAGGTGACGTCAGCAGCGCTCTCTGACCGCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCTGGTGTGTCCGCACTaGCACTCCCGGAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGLVCPH*HSRSTW
Trigger: CCACGTGCTCCGGGAGTGGCAGTGCGGACACACCAG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCTGGTGTGTCCGCACTaGCACTCCCGGAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSELVCPH*HSRSTW
Trigger: CCACGTGCTCCGGGAGTGGCAGTGCGGACACACCAG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp ACACCACCTGCTACGGGGGCCGCCGGTGGGTCCGAGCTGCACTCTCAAGGCTCTGGGGCTGCGCGAAGCTaGCCTCCACCCTGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: TPPATGAAGGSELHSQGSGAARS*PPPCSG
Trigger: ACCGCTACAGGGTGGAGGGCAGCTTCGCGCAGCCCC...AGAGCCTTGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTGGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GACACTGGCCTGGGGCCACACGAGCCCCTCCTTTCCAAGAGGGCCAAGGAAGCCAGGCGCCGGCAGCTCTaGACGCTGGGGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: DTGLGPHEPLLSKRAKEARRRQL*TLGRLA
Trigger: TGCCAGCCTCCCCAGCGTGCAGAGCTGCCGGCGCCT...GGCTTCCTTGGCCCTCTTGGAAAGGAGGGGCTCGTGTGGCCCCAGGCCAGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCACACCGACGGGGTCCTaGAGCAGGCGCTCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSTPTGS*SRRSKD
Trigger: GTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCTCCTCTCTCCAGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACACCGACGGGGTCCTaGAGCAGGCGCTCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: GSSLQGMATQATALGPLETPTGS*SRRSKD
Trigger: GTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGT...TTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCATGTCTGGGTGAGGTaGGCGGAGGACGTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSHVWVR*AEDVVC
Trigger: GCAGACGACGTCCTCCGCGCACCTCACCCAGACATG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCCCACTTCCGCCAGGATaGATTCCTGGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: AGLLGTCCESGSARPSTSPLPPG*IPGTAG
Trigger: CCCCGCTGTACCAGGAATGCATCCTGGCGGAAGTGG...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCTGCTGGGGACCTGCTaGGAGTCCGGGAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPLLGTC*ESGSAR
Trigger: CCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGCTTGGAAGCCGGGCTaGTGGGGACCTGCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARAWKPG*WGPAAS
Trigger: ACTCGCAGCAGGTCCCCAGCAGCCCGGCTTCCAAGC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGCTTGGAAGCCGGGCTaGTGGGGACCTGCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPAWKPG*WGPAAS
Trigger: ACTCGCAGCAGGTCCCCAGCAGCCCGGCTTCCAAGC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTCTGGGACCTCCCGGTaGTCCTGGTCCGCGACCACG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPSGTSR*SWSATT
Trigger: CGTGGTCGCGGACCAGGAGCACCGGGAGGTCCCAGA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGATGCAGGGCGTCGTCTaGGTGGTCCCCGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEMQGVV*VVPVLP
Trigger: AGGGAGCACGGGGACCACGCAGACGACGCCCTGCAT...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGATGCAGGGCGTCGTCTaGGTGGTCCCCGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARMQGVV*VVPVLP
Trigger: AGGGAGCACGGGGACCACGCAGACGACGCCCTGCAT...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCCTCCATTGGCATaGAGGGCGTCGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPARPPLA*RASSAW
Trigger: CCACGCAGACGACGCCCTGCATGCCAATGGAGGCCT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGACACAGAGCCCTaGGACTCTCGGCGACACAGG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSEDTEP*DSRRHR
Trigger: CCTGTGTCGCCGAGAGTCGCAGGGCTCTGTGTCCTC...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCGCTCTCCCGGCCGTTaGCTGTGGCGCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGRSPGR*LWRFSC
Trigger: GCAAGAGAAGCGCCACAGGCAACGGCCGGGAGAGCG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCGCTCTCCCGGCCGTTaGCTGTGGCGCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARRSPGR*LWRFSC
Trigger: GCAAGAGAAGCGCCACAGGCAACGGCCGGGAGAGCG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTGGACGGGCTGTCGCTaGTCTCCTGGACTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGWTGCR*SPGLAP
Trigger: GGGAGCCAGTCCAGGAGAGCAGCGACAGCCCGTCCA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTGGACGGGCTGTCGCTaGTCTCCTGGACTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPWTGCR*SPGLAP
Trigger: GGGAGCCAGTCCAGGAGAGCAGCGACAGCCCGTCCA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTCCAGATCTGGGCGGTaGCCTCCTGCGCGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSRSGR*PPARGR
Trigger: TCTCCCTCGCGCAGGAGGGCACCGCCCAGATCTGGA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTCCAGATCTGGGCGGTaGCCTCCTGCGCGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSESRSGR*PPARGR
Trigger: TCTCCCTCGCGCAGGAGGGCACCGCCCAGATCTGGA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCCTCCACCGTCTGGATaGCCCCGGCCTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEPPPSG*PRPPLP
Trigger: AGGAAGTGGAGGCCGGGGGCATCCAGACGGTGGAGG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCCTCCACCGTCTGGATaGCCCCGGCCTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPPPPSG*PRPPLP
Trigger: AGGAAGTGGAGGCCGGGGGCATCCAGACGGTGGAGG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGTCAGCTCGGCCACGTaGTCATCCTCCACCGTCTGG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAVSSAT*SSSTVW
Trigger: CCAGACGGTGGAGGATGAGCACGTGGCCGAGCTGAC...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCTGGGAGGTCTCGGCTaGCATGGGTCCCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSLGGLG*HGSHFL
Trigger: CAGGAAGTGGGACCCATGGCAGCCGAGACCTCCCAG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTAGCGAGGTCACCCCCTaGCCTCCTGGCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPSEVTP*PPGWAP
Trigger: AGGAGCCCAGCCAGGAGGGCAGGGGGTGACCTCGCT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTAATGTCCGGGGCCAGTaGCTCCAGCGAGGTCACCCC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGNVRGQ*LQRGHP
Trigger: GGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCACACTCCGCACCCTTaGGGGCGACGGCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPHTPHP*GRRPRQ
Trigger: TTGCCTGGGCCGTCGCCCCCAAGGGTGCGGAGTGTG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCACTGGTGCTGTTGTTCTaGTGGGCATCGGCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPLVLLF*WASASP
Trigger: CGGGGACGCCGATGCCCACCAGAACAACAGCACCAG...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGGCAGCTCTGCACGCTaGGGAGGCTGGCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARGSSAR*GGWHCC
Trigger: GCAGCAATGCCAGCCTCCCCAGCGTGCAGAGCTGCC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTAGGACACGGCCCAGCTaGCGACCCTCCTCTCACGCA +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPRTRPS*RPSSHA
Trigger: TGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGAGGACACGGCCCAGCTaGCGACCCTCCTCTCACGCA +
Preference number: 4 (lower is better)
Translates to: LGTCCESGSARPSTSARMRTRPS*RPSSHA
Trigger: TGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCT...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCTCTGCTAGCTGGGCCTaGCTGTCGATGTTGACCGGG +
Preference number: 4 (lower is better)
Translates to: AGLLGTCCESGSARPSTSSASWA*LSMLTG
Trigger: CCCGGTCAACATCGACAGCCAGGCCCAGCTAGCAGA...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGCTCCTTGAACATGTCTaGGTGAGGTGCGCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGLLEHV*VRCAED
Trigger: GTCCTCCGCGCACCTCACCCAGACATGTTCAAGGAG...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCAACCGAGGCTGTGCTTaGAAGCCGGGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSNRGCA*KPGCWG
Trigger: TCCCCAGCAGCCCGGCTTCCAAGCACAGCCTCGGTT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCAGGGCGTCGTCTGCGTaGTCCCCGTGCTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSRASSA*SPCSLF
Trigger: AAAGAGGGAGCACGGGGACCACGCAGACGACGCCCT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGGTCCAGGCCGTATCTaGCCACCACGGGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPGPGRI*PPRAAA
Trigger: TGCTGCGGCCCGTGGTGGCCAGATACGGCCTGGACC...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTGCAGAAGGGCCCGCTaGGAGACTTCTGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPCRRAR*ETSARG
Trigger: CCCCCGGGCAGAAGTCTCCCAGCGGGCCCTTCTGCA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp TCCTCTCTCCAGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACATGCAGAAGGGCCCGCTaGGAGACTTCTGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SSLQGMATQATALGPLETCRRAR*ETSARG
Trigger: CCCCCGGGCAGAAGTCTCCCAGCGGGCCCTTCTGCA...TGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGCCTCTTCCAGATCTaGGCGGTGCCCTCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARCLFQI*AVPSCA
Trigger: CGCGCAGGAGGGCACCGCCCAGATCTGGAAGAGGCA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGCCCCATGGCCAGCATaGCGAATGTCCGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARAPWPA*RMSGAS
Trigger: ACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGCCCCATGGCCAGCATaGCGAATGTCCGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGAPWPA*RMSGAS
Trigger: ACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGGCCAGGGAGCCCCATaGCCAGCATGGCGAATGTCC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARGQGAP*PAWRMS
Trigger: GGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCCTGTCCCGAAAGCGTaGATCCGTAGCCGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPPVPKA*IRSRPS
Trigger: GGAGGGCCGGCTACGGATTCACGCTTTCGGGACAGG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGTACAGGACAGAGATaGACTGCAGGACGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSGTGQR*TAGRGG
Trigger: CCCTCCCCGTCCTGCAGTTCATCTCTGTCCTGTACC...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGGAGCCAGCGCTGGTTaGAACCACAGCCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGGASAG*NHSQHP
Trigger: TGGGTGCTGGCTGTGGTTTCAACCAGCGCTGGCTCC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGCTTGGATCTCCCAAATaGTCTCCGAGCAGACGTGCG +
Preference number: 4 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGLGSPK*SPSRRA
Trigger: CGCACGTCTGCTCGGAGATCATTTGGGAGATCCAAG...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCCTGGCTGTCGATGTTaGCCGGGGTGGTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGPGCRC*PGWWLC
Trigger: GCAAAGCCACCACCCCGGTCAACATCGACAGCCAGG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GGCTCCTCTCTCCAGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAATTGAACATGTCTGGGTaGGGTGCGCGGAGGACGTCG +
Preference number: 4 (lower is better)
Translates to: GSSLQGMATQATALGPLELNMSG*GARRTS
Trigger: CGACGTCCTCCGCGCACCTCACCCAGACATGTTCAA...TTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCATTGAACATGTCTGGGTaGGGTGCGCGGAGGACGTCG +
Preference number: 4 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPLNMSG*GARRTS
Trigger: CGACGTCCTCCGCGCACCTCACCCAGACATGTTCAA...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTGGAGAAGCCCGCCTTaGCAGCCACCACGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPWRSPP*QPPRRM
Trigger: CATCCTGCGTGGTGGCTGTCAAGGCGGGCTTCTCCA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGGAGAAGCCCGCCTTaGCAGCCACCACGCAGGATG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARWRSPP*QPPRRM
Trigger: CATCCTGCGTGGTGGCTGTCAAGGCGGGCTTCTCCA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCAGCAGGCCACTaGGGTCCAGGCCGTATCTGG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARSPAGH*GPGRIW
Trigger: CCAGATACGGCCTGGACCTCAGTGGCCTGCTGGTGA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTCACCAGCAGGCCACTaGGGTCCAGGCCGTATCTGG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSPAGH*GPGRIW
Trigger: CCAGATACGGCCTGGACCTCAGTGGCCTGCTGGTGA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTCACCAGCAGGCCACTaGGGTCCAGGCCGTATCTGG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPSPAGH*GPGRIW
Trigger: CCAGATACGGCCTGGACCTCAGTGGCCTGCTGGTGA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGACGAAGGTGGCGTGGTaGGCGCTGGTCTTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPATKVAW*ALVLGL
Trigger: TAAGCCCAAGACCAGCGCTCACCACGCCACCTTCGT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCAGCCGCGGATGGCTTaGAAGCTGTCGGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARQPRMA*KLSDSR
Trigger: CCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCAGCCGCGGATGGCTTaGAAGCTGTCGGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAAQPRMA*KLSDSR
Trigger: CCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTG...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGTGGATTTTCTGCTCTaGCCGCAGGCGCCGCATGCA +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAVDFLL*PQAPHA
Trigger: TGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCAC...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTAGCGAGTGGATTTTCTaGTCTGCCCGCAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPSEWIF*SARRRR
Trigger: GCGGCGCCTGCGGGCAGAGCAGAAAATCCACTCGCT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGAGCGAGTGGATTTTCTaGTCTGCCCGCAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LGTCCESGSARPSTSARMSEWIF*SARRRR
Trigger: GCGGCGCCTGCGGGCAGAGCAGAAAATCCACTCGCT...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp CCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCACAAGGACCCGGTTaGTCTTCTCCTCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PGCWGPAASPGVHGPPLPPQGPG*SSPPGG
Trigger: TCCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGG...CGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp ATCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTCACCGTCCCACGCGCTaGCTCCGGGGCCGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: IAPSSKPQQRCPRTPEHTHRPTR*LRGRVC
Trigger: GCAGACACGGCCCCGGAGGCAGCGCGTGGGACGGTG...AGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGGAGGCTGGCCCTAGGTaGTTGTTTAGGTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGEAGPR*LFRSQN
Trigger: GTTCTGGGACCTAAACAAGCACCTAGGGCCAGCCTC...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTACACCGACGGGGTCCTaGAGCAGGCGCTCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPTPTGS*SRRSKD
Trigger: GTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGACACCGACGGGGTCCTaGAGCAGGCGCTCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARTPTGS*SRRSKD
Trigger: GTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGT...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCATGTCTGGGTGAGGTaGGCGGAGGACGTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPHVWVR*AEDVVC
Trigger: GCAGACGACGTCCTCCGCGCACCTCACCCAGACATG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTCTGAACCGAGGCTGTaGTTGGAAGCCGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSSEPRL*LEAGLL
Trigger: CAGCAGCCCGGCTTCCAAGCACAGCCTCGGTTCAGA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTCTGAACCGAGGCTGTaGTTGGAAGCCGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPASEPRL*LEAGLL
Trigger: CAGCAGCCCGGCTTCCAAGCACAGCCTCGGTTCAGA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GACACTGGCCTGGGGCCACACGAGCCCCTCCTTTCCAAGAGGGCCAAGGAAGCCTCTGGGACCTCCCGGTaGTCCTGGTCCGCGACCACG +
Preference number: 4 (lower is better)
Translates to: DTGLGPHEPLLSKRAKEASGTSR*SWSATT
Trigger: CGTGGTCGCGGACCAGGAGCACCGGGAGGTCCCAGA...GGCTTCCTTGGCCCTCTTGGAAAGGAGGGGCTCGTGTGGCCCCAGGCCAGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACACCTTTCCCTACCGATGCAGGGCGTCGTCTaGGTGGTCCCCGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GWPRRPRPSDPWKHLSLPMQGVV*VVPVLP
Trigger: AGGGAGCACGGGGACCACGCAGACGACGCCCTGCAT...CGGTAGGGAAAGGTGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTAGGCCTCCATTGGCATaGAGGGCGTCGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPRPPLA*RASSAW
Trigger: CCACGCAGACGACGCCCTGCATGCCAATGGAGGCCT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGAGGACACAGAGCCCTaGGACTCTCGGCGACACAGG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGEDTEP*DSRRHR
Trigger: CCTGTGTCGCCGAGAGTCGCAGGGCTCTGTGTCCTC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCGGGTGCCAAAGTCCTaGAGGCCTCCGACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSERVPKS*RPPTGP
Trigger: TGGACCTGTCGGAGGCCTGCAGGACTTTGGCACCCG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGCCCCGTTGATGCCATaGCGCTCACAGAGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPAPLMP*RSQSPD
Trigger: GTCCGGACTCTGTGAGCGGCATGGCATCAACGGGGC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCCCCGTTGATGCCATaGCGCTCACAGAGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEAPLMP*RSQSPD
Trigger: GTCCGGACTCTGTGAGCGGCATGGCATCAACGGGGC...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AATGCCCGTGACACCCGCGGTCAGAGAGCGCTGCTGACGTCACCTCCACTCCCGTGGACTGGCTCCCACTaGTCGCCAGGCTGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: NARDTRGQRALLTSPPLPWTGSH*SPGWEA
Trigger: CGCCTCCCAGCCTGGCGAGCAGTGGGAGCCAGTCCA...CGGGAGTGGAGGTGACGTCAGCAGCGCTCTCTGACCGCGGGTGTCACGGGCATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCCTCCACCGTCTGGATaGCCCCGGCCTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPPPPSG*PRPPLP
Trigger: AGGAAGTGGAGGCCGGGGGCATCCAGACGGTGGAGG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCAGCTCGGCCACGTaGTCATCCTCCACCGTCTGG +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEVSSAT*SSSTVW
Trigger: CCAGACGGTGGAGGATGAGCACGTGGCCGAGCTGAC...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCTGGGAGGTCTCGGCTaGCATGGGTCCCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARLGGLG*HGSHFL
Trigger: CAGGAAGTGGGACCCATGGCAGCCGAGACCTCCCAG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTAATGTCCGGGGCCAGTaGCTCCAGCGAGGTCACCCC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPNVRGQ*LQRGHP
Trigger: GGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GACACTGGCCTGGGGCCACACGAGCCCCTCCTTTCCAAGAGGGCCAAGGAAGCCCACACTCCGCACCCTTaGGGGCGACGGCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: DTGLGPHEPLLSKRAKEAHTPHP*GRRPRQ
Trigger: TTGCCTGGGCCGTCGCCCCCAAGGGTGCGGAGTGTG...GGCTTCCTTGGCCCTCTTGGAAAGGAGGGGCTCGTGTGGCCCCAGGCCAGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTCCACCATGAACACGTaGCAGGAAGTCCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPASTMNT*QEVRRA
Trigger: CGCCCTGCGGACTTCCTGCCACGTGTTCATGGTGGA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGCTGTTGTTCTGGTaGGCATCGGCGTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEVLLFW*ASASPS
Trigger: GGACGGGGACGCCGATGCCCACCAGAACAACAGCAC...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCTGGTGCTGTTGTTCTaGTGGGCATCGGCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGLVLLF*WASASP
Trigger: CGGGGACGCCGATGCCCACCAGAACAACAGCACCAG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGATGAGCGGCCTCAAATaGGGGGCTCCCTTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARMSGLK*GAPFGV
Trigger: GACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCAT...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTATGAGCGGCCTCAAATaGGGGGCTCCCTTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPMSGLK*GAPFGV
Trigger: GACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCAT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGCTCCTCAAGGAAGCTaGGGGCACCTCCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPAPQGS*GHLHRR
Trigger: TCTCCTGTGGAGGTGCCCCCAGCTTCCTTGAGGAGC...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCAAGAGTCCTGGTCGCTaGTGTGTCCGCACTGCCACT +
Preference number: 4 (lower is better)
Translates to: AGLLGTCCESGSARPSTSKSPGR*CVRTAT
Trigger: AGTGGCAGTGCGGACACACCAGCGACCAGGACTCTT...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTAACCGAGGCTGTGCTTaGAAGCCGGGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGNRGCA*KPGCWG
Trigger: TCCCCAGCAGCCCGGCTTCCAAGCACAGCCTCGGTT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGAACCGAGGCTGTGCTTaGAAGCCGGGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSENRGCA*KPGCWG
Trigger: TCCCCAGCAGCCCGGCTTCCAAGCACAGCCTCGGTT...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGAACCGAGGCTGTGCTTaGAAGCCGGGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LGTCCESGSARPSTSARMNRGCA*KPGCWG
Trigger: TCCCCAGCAGCCCGGCTTCCAAGCACAGCCTCGGTT...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCACCTCCCGGTGCTCCTaGTCCGCGACCACGAGAAAA +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSTSRCS*SATTRK
Trigger: TTTTCTCGTGGTCGCGGACCAGGAGCACCGGGAGGT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGAGGGCGTCGTCTGCGTaGTCCCCGTGCTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARRASSA*SPCSLF
Trigger: AAAGAGGGAGCACGGGGACCACGCAGACGACGCCCT...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGAGGGCGTCGTCTGCGTaGTCCCCGTGCTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSERASSA*SPCSLF
Trigger: AAAGAGGGAGCACGGGGACCACGCAGACGACGCCCT...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTGCCTCTTCCAGATCTaGGCGGTGCCCTCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPCLFQI*AVPSCA
Trigger: CGCGCAGGAGGGCACCGCCCAGATCTGGAAGAGGCA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCATCCTCCACCGTCTaGATGCCCCCGGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARSSSTV*MPPAST
Trigger: AGTGGAGGCCGGGGGCATCCAGACGGTGGAGGATGA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTCATCCTCCACCGTCTaGATGCCCCCGGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPSSSTV*MPPAST
Trigger: AGTGGAGGCCGGGGGCATCCAGACGGTGGAGGATGA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTCATCCTCCACCGTCTaGATGCCCCCGGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSESSSTV*MPPAST
Trigger: AGTGGAGGCCGGGGGCATCCAGACGGTGGAGGATGA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCAGGTCTCGGCTGCCATaGGTCCCACTTCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSRSRLP*VPLPGL
Trigger: CAGACCAGGAAGTGGGACCCATGGCAGCCGAGACCT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCAGCTCAGACGAAGGTaGCGTGGTGAGCGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSQLRRR*RGERWS
Trigger: AGACCAGCGCTCACCACGCCACCTTCGTCTGAGCTG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCCCACAGAATCCACCTaGGCTGCCCCACCCCGACAT +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEPTEST*AAPPRH
Trigger: ATGTCGGGGTGGGGCAGCCCAGGTGGATTCTGTGGG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCCCACAGAATCCACCTaGGCTGCCCCACCCCGACAT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPPTEST*AAPPRH
Trigger: ATGTCGGGGTGGGGCAGCCCAGGTGGATTCTGTGGG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCCCACAGAATCCACCTaGGCTGCCCCACCCCGACAT +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARPTEST*AAPPRH
Trigger: ATGTCGGGGTGGGGCAGCCCAGGTGGATTCTGTGGG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGGCACACAGTCGTGCATaGTCTTCATGGTCACCAGCG +
Preference number: 4 (lower is better)
Translates to: PGCWGPAASPGVHGPPLPAHSRA*SSWSPA
Trigger: CGCTGGTGACCATGAAGATCATGCACGACTGTGTGC...CGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGGTACAGGACAGAGATaGACTGCAGGACGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARGTGQR*TAGRGG
Trigger: CCCTCCCCGTCCTGCAGTTCATCTCTGTCCTGTACC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGGAGCCAGCGCTGGTTaGAACCACAGCCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPGASAG*NHSQHP
Trigger: TGGGTGCTGGCTGTGGTTTCAACCAGCGCTGGCTCC...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp TCCTCTCTCCAGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACAGGAGCCAGCGCTGGTTaGAACCACAGCCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: SSLQGMATQATALGPLETGASAG*NHSQHP
Trigger: TGGGTGCTGGCTGTGGTTTCAACCAGCGCTGGCTCC...TGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCAGTGTGCCGCAGTTaGTGCTGGACCAGCCATCGG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPAVCRS*CWTSHR
Trigger: CCGATGGCTGGTCCAGCATCAACTGCGGCACACTGC...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGTTGAGAAGGCTGAGTaGGTCCAGTTCCCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAVEKAE*VQFPAQ
Trigger: TTGGGCGGGGAACTGGACTCACTCAGCCTTCTCAAC...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTCAGGCTGTTGTTGCTaGCGCAGTCCTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPASGCCC*RSPSGR
Trigger: CCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTGAACATGTCTGGGTaGGGTGCGCGGAGGACGTCG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARLNMSG*GARRTS
Trigger: CGACGTCCTCCGCGCACCTCACCCAGACATGTTCAA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTTGAACATGTCTGGGTaGGGTGCGCGGAGGACGTCG +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSELNMSG*GARRTS
Trigger: CGACGTCCTCCGCGCACCTCACCCAGACATGTTCAA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTCCCATCCGGGAGATaGATGCAGCAGTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSVPSGR*MQQCLV
Trigger: CACCAAGCACTGCTGCATTCATCTCCCGGATGGGAC...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCAAGCCAGGGAGGTCTaGTGTAGGAGGCCCACCACT +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEQAREV*CRRPTT
Trigger: AGTGGTGGGCCTCCTACATCAGACCTCCCTGGCTTG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGACGAAGGTGGCGTGGTaGGCGCTGGTCTTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSETKVAW*ALVLGL
Trigger: TAAGCCCAAGACCAGCGCTCACCACGCCACCTTCGT...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTACGAAGGTGGCGTGGTaGGCGCTGGTCTTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGTKVAW*ALVLGL
Trigger: TAAGCCCAAGACCAGCGCTCACCACGCCACCTTCGT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGCAGGAGAATGGCATaGACTCGGGAGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSGRRMA*TREVEL
Trigger: AAGCTCCACCTCCCGAGTTCATGCCATTCTCCTGCC...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344733.9
CDS-3UTR TCA 90 bp GACACTGGCCTGGGGCCACACGAGCCCCTCCTTTCCAAGAGGGCCAAGGAAGCCGTGTCCACGCACCCCTaGGCACACTCCATGACGCGC +
Preference number: 4 (lower is better)
Translates to: DTGLGPHEPLLSKRAKEAVSTHP*AHSMTR
Trigger: GCGCGTCATGGAGTGTGCTCAGGGGTGCGTGGACAC...GGCTTCCTTGGCCCTCTTGGAAAGGAGGGGCTCGTGTGGCCCCAGGCCAGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGTGGATTTTCTGCTCTaGCCGCAGGCGCCGCATGCA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGVDFLL*PQAPHA
Trigger: TGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCAC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTGTGGATTTTCTGCTCTaGCCGCAGGCGCCGCATGCA +
Preference number: 4 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAAVDFLL*PQAPHA
Trigger: TGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCAC...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTGTCTGGGTCGGCCGTaGACTCAAACCCAAACCGCC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGCLGRP*TQTQTA
Trigger: GGCGGTTTGGGTTTGAGTGCACGGCCGACCCAGACA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCAGGACAGAGATGAACTaGAGGACGGGGAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSRTEMN*RTGRED
Trigger: GTCCTCCCTCCCCGTCCTGCAGTTCATCTCTGTCCT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCCACAAGGACCCGGTTaGTCTTCTCCTCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAPQGPG*SSPPGG
Trigger: TCCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCACCCTGTAGCGGTCTaGGGGGATCTTGCTCATAGG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSHPVAV*GDLAHR
Trigger: CCTATGAGCAAGATCCCCGCAGACCGCTACAGGGTG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCACCCTGTAGCGGTCTaGGGGGATCTTGCTCATAGG +
Preference number: 4 (lower is better)
Translates to: SRAAGDLLRVRECTALHFHPVAV*GDLAHR
Trigger: CCTATGAGCAAGATCCCCGCAGACCGCTACAGGGTG...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp TCCTCTCTCCAGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACACATGTCTGGGTGAGGTaGGCGGAGGACGTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: SSLQGMATQATALGPLETHVWVR*AEDVVC
Trigger: GCAGACGACGTCCTCCGCGCACCTCACCCAGACATG...TGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCCACTTCCGCCAGGATaGATTCCTGGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPPLPPG*IPGTAG
Trigger: CCCCGCTGTACCAGGAATGCATCCTGGCGGAAGTGG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCCACTTCCGCCAGGATaGATTCCTGGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARPLPPG*IPGTAG
Trigger: CCCCGCTGTACCAGGAATGCATCCTGGCGGAAGTGG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTCTGAACCGAGGCTGTaGTTGGAAGCCGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSEPRL*LEAGLL
Trigger: CAGCAGCCCGGCTTCCAAGCACAGCCTCGGTTCAGA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCTCCTCTCTCCAGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAATCTGCGTGGTCCCCGTaGTCCCTCTTTTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GSSLQGMATQATALGPLESAWSP*SLFFWD
Trigger: GTCCCAGAAAAAGAGGGAGCACGGGGACCACGCAGA...TTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCGGGTGCCAAAGTCCTaGAGGCCTCCGACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPRVPKS*RPPTGP
Trigger: TGGACCTGTCGGAGGCCTGCAGGACTTTGGCACCCG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCTTGTCCTTCTCGGGTaGCAAAGTCCTGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSLVLLG*QSPAGL
Trigger: GAGGCCTGCAGGACTTTGGCACCCGAGAAGGACAAG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCCGTTGATGCCATaGCGCTCACAGAGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPAPLMP*RSQSPD
Trigger: GTCCGGACTCTGTGAGCGGCATGGCATCAACGGGGC...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCATGCCAGGCACCTCAGGCTTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGTGGGCGGTGCCCTCCTaGGCGAGGGAGACGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GMPGTSGFLIQACPGCERWAVPS*ARETGD
Trigger: GTCCCCCGTCTCCCTCGCGCAGGAGGGCACCGCCCA...CCTTTCACAGCCAGGACACGCCTGGATGAGAAAGCCTGAGGTGCCTGGCATGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GCCTCTCACTGCTGTCAGCATCCTGGACCAGGGCACAGGACGGAGAGGCGCTCCCCTCCACCGTCTGGATaGCCCCGGCCTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: ASHCCQHPGPGHRTERRSPPPSG*PRPPLP
Trigger: AGGAAGTGGAGGCCGGGGGCATCCAGACGGTGGAGG...GGAGCGCCTCTCCGTCCTGTGCCCTGGTCCAGGATGCTGACAGCAGTGAGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGCATGCAGCCGCGGATaGCTTGCAAGCTGTCGGACT +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGACSRG*LASCRT
Trigger: AGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGCATGCAGCCGCGGATaGCTTGCAAGCTGTCGGACT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPACSRG*LASCRT
Trigger: AGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTCCACCATGAACACGTaGCAGGAAGTCCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSTMNT*QEVRRA
Trigger: CGCCCTGCGGACTTCCTGCCACGTGTTCATGGTGGA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGTGCTGTTGTTCTGGTaGGCATCGGCGTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPVLLFW*ASASPS
Trigger: GGACGGGGACGCCGATGCCCACCAGAACAACAGCAC...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCATGAGCGGCCTCAAATaGGGGGCTCCCTTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSMSGLK*GAPFGV
Trigger: GACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCAT...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGCTCCTCAAGGAAGCTaGGGGCACCTCCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGAPQGS*GHLHRR
Trigger: TCTCCTGTGGAGGTGCCCCCAGCTTCCTTGAGGAGC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTACCGGGAGCCAGCGCTaGTTGAAACCACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPTGSQR*LKPQPA
Trigger: TGCTGGCTGTGGTTTCAACCAGCGCTGGCTCCCGGT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGACCGGGAGCCAGCGCTaGTTGAAACCACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGTCCESGSARPSTSARMTGSQR*LKPQPA
Trigger: TGCTGGCTGTGGTTTCAACCAGCGCTGGCTCCCGGT...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCTGCTAGCTGGGCCTaGCTGTCGATGTTGACCGGG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARSASWA*LSMLTG
Trigger: CCCGGTCAACATCGACAGCCAGGCCCAGCTAGCAGA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTCTGCTAGCTGGGCCTaGCTGTCGATGTTGACCGGG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSASWA*LSMLTG
Trigger: CCCGGTCAACATCGACAGCCAGGCCCAGCTAGCAGA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTCTGCTAGCTGGGCCTaGCTGTCGATGTTGACCGGG +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSESASWA*LSMLTG
Trigger: CCCGGTCAACATCGACAGCCAGGCCCAGCTAGCAGA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGACGTCGTCTGCTAGCTaGGCCTGGCTGTCGATGTTG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPATSSAS*AWLSML
Trigger: CAACATCGACAGCCAGGCCCAGCTAGCAGACGACGT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTACCTCCCGGTGCTCCTaGTCCGCGACCACGAGAAAA +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPTSRCS*SATTRK
Trigger: TTTTCTCGTGGTCGCGGACCAGGAGCACCGGGAGGT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTACCTCCCGGTGCTCCTaGTCCGCGACCACGAGAAAA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGTSRCS*SATTRK
Trigger: TTTTCTCGTGGTCGCGGACCAGGAGCACCGGGAGGT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGACACAGGCCTCCATTaGCATGCAGGGCGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPDTGLH*HAGRRL
Trigger: CAGACGACGCCCTGCATGCCAATGGAGGCCTGTGTC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGACACAGGCCTCCATTaGCATGCAGGGCGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARDTGLH*HAGRRL
Trigger: CAGACGACGCCCTGCATGCCAATGGAGGCCTGTGTC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCTTGGCCACAGCAGCTaGAGTGGGGAGGGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARLGHSS*SGEGEF
Trigger: GAACTCACCCTCCCCACTCCAGCTGCTGTGGCCAAG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGATGGGTCCCACTTCCTaGTCTGGAAGGTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAMGPTS*SGRSWH
Trigger: GTGCCAGGACCTTCCAGACCAGGAAGTGGGACCCAT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTAGGTCTCGGCTGCCATaGGTCCCACTTCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPRSRLP*VPLPGL
Trigger: CAGACCAGGAAGTGGGACCCATGGCAGCCGAGACCT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGAGGTCTCGGCTGCCATaGGTCCCACTTCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSERSRLP*VPLPGL
Trigger: CAGACCAGGAAGTGGGACCCATGGCAGCCGAGACCT...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp ACCCGCGGTCAGAGAGCGCTGCTGACGTCACCTCCACTCCCGAGCACCCACACCCGGCCCTCGGACCCCTaGAAACACCTTTCCCTACCG +
Preference number: 4 (lower is better)
Translates to: TRGQRALLTSPPLPSTHTRPSDP*KHLSLP
Trigger: CGGTAGGGAAAGGTGTTTCCAGGGGTCCGAGGGCCG...GGTGTGGGTGCTCGGGAGTGGAGGTGACGTCAGCAGCGCTCTCTGACCGCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CGGGGGCCCACTGTCCTTTCTGACTGGAAGCTGAGCAGACCACGCTTACGGGGCCAGACGTGCACTCCCTaGTCCCCCGGCGAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RGPTVLSDWKLSRPRLRGQTCTP*SPGEVQ
Trigger: CTGGACCTCGCCGGGGGACCAGGGAGTGCACGTCTG...GCCCCGTAAGCGTGGTCTGCTCAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGGACCCCGGGCACACGGCGCTaGAGGCCAGCTTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: LTRPNLTAGLSLLSASWTPGTRR*RPASRP
Trigger: CGGCCGAGAAGCTGGCCTTCAGCGCCGTGTGCCCGG...GGTCCAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTGAGAAGGCTGAGTaGGTCCAGTTCCCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEVEKAE*VQFPAQ
Trigger: TTGGGCGGGGAACTGGACTCACTCAGCCTTCTCAAC...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGGTTGAGAAGGCTGAGTaGGTCCAGTTCCCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: LGTCCESGSARPSTSARMVEKAE*VQFPAQ
Trigger: TTGGGCGGGGAACTGGACTCACTCAGCCTTCTCAAC...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCTTGGATCTCCCAAATaGTCTCCGAGCAGACGTGCG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPALGSPK*SPSRRA
Trigger: CGCACGTCTGCTCGGAGATCATTTGGGAGATCCAAG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTCAGGCTGTTGTTGCTaGCGCAGTCCTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSESGCCC*RSPSGR
Trigger: CCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTCAGGCTGTTGTTGCTaGCGCAGTCCTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSGCCC*RSPSGR
Trigger: CCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTTGAACATGTCTGGGTaGGGTGCGCGGAGGACGTCG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPLNMSG*GARRTS
Trigger: CGACGTCCTCCGCGCACCTCACCCAGACATGTTCAA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGCAGCTGCTGCTCCTTaGACATGTCTGGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARAAAAP*TCLGEV
Trigger: CACCTCACCCAGACATGTTCAAGGAGCAGCAGCTGC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGCAGCTGCTGCTCCTTaGACATGTCTGGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPAAAAP*TCLGEV
Trigger: CACCTCACCCAGACATGTTCAAGGAGCAGCAGCTGC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACACTGGAGTGGTCTaGACCGAGGCTGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGHTGVV*TEAVLG
Trigger: TCCAAGCACAGCCTCGGTTCAGACCACTCCAGTGTG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCACACTGGAGTGGTCTaGACCGAGGCTGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPHTGVV*TEAVLG
Trigger: TCCAAGCACAGCCTCGGTTCAGACCACTCCAGTGTG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGTCCCATCCGGGAGATaGATGCAGCAGTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARVPSGR*MQQCLV
Trigger: CACCAAGCACTGCTGCATTCATCTCCCGGATGGGAC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGGCCTTGAGTCCCACTaGCCGGTTAATCGGAACAAG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAGLESH*PVNRNK
Trigger: CTTGTTCCGATTAACCGGTCAGTGGGACTCAAGGCC...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTAGGTGGAGCTTGCAGTaGGCCGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPRWSLQ*AEIVPL
Trigger: CAGTGGCACGATCTCGGCTCACTGCAAGCTCCACCT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344733.9
CDS-3UTR TCA 90 bp CTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGCCCCCAACCAGCAGGTaGGGAGGGGGTCACGGAGAC +
Preference number: 4 (lower is better)
Translates to: LSRLFRGRACVWEPSPAMPPTSR*GGGHGD
Trigger: GTCTCCGTGACCCCCTCCTCACCTGCTGGTTGGGGG...CATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGCTGAGCACACAGGGTaGCTGTCCCGAAAGCGTGAA +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPAEHTG*LSRKRE
Trigger: TTCACGCTTTCGGGACAGGCACCCTGTGTGCTCAGC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGTGGAGGCTGCAGAGTGGCACCGGTGGGCATGCCAGGCACCTCAGGCTTTCTAGCGAGTGGATTTTCTaGTCTGCCCGCAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GWRLQSGTGGHARHLRLSSEWIF*SARRRR
Trigger: GCGGCGCCTGCGGGCAGAGCAGAAAATCCACTCGCT...AGAAAGCCTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGCCGTCGTCATTCGTCTaGATGGTAACCAACCCGAAA +
Preference number: 4 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGPSSFV*MVTNPK
Trigger: TTTCGGGTTGGTTACCATGCAGACGAATGACGACGG...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTGTCTGGGTCGGCCGTaGACTCAAACCCAAACCGCC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPCLGRP*TQTQTA
Trigger: GGCGGTTTGGGTTTGAGTGCACGGCCGACCCAGACA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTAGGACAGAGATGAACTaGAGGACGGGGAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGRTEMN*RTGRED
Trigger: GTCCTCCCTCCCCGTCCTGCAGTTCATCTCTGTCCT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGGTGGAAGTTCCCAATaGCGCTGTCACTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAGGSSQ*RCHCCC
Trigger: GCAGCAACAGTGACAGCGGCATTGGGAACTTCCACC...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCACCCTGTAGCGGTCTaGGGGGATCTTGCTCATAGG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARHPVAV*GDLAHR
Trigger: CCTATGAGCAAGATCCCCGCAGACCGCTACAGGGTG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp TCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTCGCTTGGAAGCCGGGCTaGTGGGGACCTGCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: SPPAANHSRGVHAPLSTLAWKPG*WGPAAS
Trigger: ACTCGCAGCAGGTCCCCAGCAGCCCGGCTTCCAAGC...GAGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCTCTGAACCGAGGCTGTaGTTGGAAGCCGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSSEPRL*LEAGLL
Trigger: CAGCAGCCCGGCTTCCAAGCACAGCCTCGGTTCAGA...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTCTGCGTGGTCCCCGTaGTCCCTCTTTTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSESAWSP*SLFFWD
Trigger: GTCCCAGAAAAAGAGGGAGCACGGGGACCACGCAGA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCTCTCACTGCTGTCAGCATCCTGGACCAGGGCACAGGACGGAGAGGCGCTCCCGGGTGCCAAAGTCCTaGAGGCCTCCGACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ASHCCQHPGPGHRTERRSRVPKS*RPPTGP
Trigger: TGGACCTGTCGGAGGCCTGCAGGACTTTGGCACCCG...GGAGCGCCTCTCCGTCCTGTGCCCTGGTCCAGGATGCTGACAGCAGTGAGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCTTGTCCTTCTCGGGTaGCAAAGTCCTGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGLVLLG*QSPAGL
Trigger: GAGGCCTGCAGGACTTTGGCACCCGAGAAGGACAAG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCTTGTCCTTCTCGGGTaGCAAAGTCCTGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPLVLLG*QSPAGL
Trigger: GAGGCCTGCAGGACTTTGGCACCCGAGAAGGACAAG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCATCCGGGAGATGAATaGAGCAGTGCTTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAHPGDE*SSAWWP
Trigger: AGGCCACCAAGCACTGCTGCATTCATCTCCCGGATG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCCAGCCGAAACAAGGTaGGCTTTTCTAGGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSPAETR*AFLGAG
Trigger: ACCTGCGCCTAGAAAAGCGCACCTTGTTTCGGCTGG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTTGACAGCAAGTATCTaGTCTCCAGCTCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPALTASI*SPARRP
Trigger: GGGCCTCCGAGCTGGAGACCAGATACTTGCTGTCAA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCGCATGCAGCCGCGGATaGCTTGCAAGCTGTCGGACT +
Preference number: 4 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSACSRG*LASCRT
Trigger: AGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGC...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCATGGTCACCAGCGAGTaGATTTTCTGCTCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSMVTSE*IFCSAR
Trigger: GCGGGCAGAGCAGAAAATCCACTCGCTGGTGACCAT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGACAGCCATTGGTGTCTaGGTCGGCCGTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPATAIGV*VGRALK
Trigger: TTTGAGTGCACGGCCGACCCAGACACCAATGGCTGT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp GCCTCTCACTGCTGTCAGCATCCTGGACCAGGGCACAGGACGGAGAGGCGCTCCCTGGTGCTGTTGTTCTaGTGGGCATCGGCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: ASHCCQHPGPGHRTERRSLVLLF*WASASP
Trigger: CGGGGACGCCGATGCCCACCAGAACAACAGCACCAG...GGAGCGCCTCTCCGTCCTGTGCCCTGGTCCAGGATGCTGACAGCAGTGAGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCTCCTCAAGGAAGCTaGGGGCACCTCCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPAPQGS*GHLHRR
Trigger: TCTCCTGTGGAGGTGCCCCCAGCTTCCTTGAGGAGC...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTACCGGGAGCCAGCGCTaGTTGAAACCACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPTGSQR*LKPQPA
Trigger: TGCTGGCTGTGGTTTCAACCAGCGCTGGCTCCCGGT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTAAGAGTCCTGGTCGCTaGTGTGTCCGCACTGCCACT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPKSPGR*CVRTAT
Trigger: AGTGGCAGTGCGGACACACCAGCGACCAGGACTCTT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGAAGAGTCCTGGTCGCTaGTGTGTCCGCACTGCCACT +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEKSPGR*CVRTAT
Trigger: AGTGGCAGTGCGGACACACCAGCGACCAGGACTCTT...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp AACCAGCAGGTGAGGAGGGGGTCACGGAGACCACCAGCAAACAGTGGCAGCCGGGGCAGCTCTGCACGCTaGGGAGGCTGGCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: NQQVRRGSRRPPANSGSRGSSAR*GGWHCC
Trigger: GCAGCAATGCCAGCCTCCCCAGCGTGCAGAGCTGCC...CCGGCTGCCACTGTTTGCTGGTGGTCTCCGTGACCCCCTCCTCACCTGCTGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACACCTTTCCCTACCGTCTGCTAGCTGGGCCTaGCTGTCGATGTTGACCGGG +
Preference number: 4 (lower is better)
Translates to: GWPRRPRPSDPWKHLSLPSASWA*LSMLTG
Trigger: CCCGGTCAACATCGACAGCCAGGCCCAGCTAGCAGA...CGGTAGGGAAAGGTGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTACGTCGTCTGCTAGCTaGGCCTGGCTGTCGATGTTG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPTSSAS*AWLSML
Trigger: CAACATCGACAGCCAGGCCCAGCTAGCAGACGACGT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGACGTCGTCTGCTAGCTaGGCCTGGCTGTCGATGTTG +
Preference number: 4 (lower is better)
Translates to: LGTCCESGSARPSTSARMTSSAS*AWLSML
Trigger: CAACATCGACAGCCAGGCCCAGCTAGCAGACGACGT...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCTCCTTGAACATGTCTaGGTGAGGTGCGCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSELLEHV*VRCAED
Trigger: GTCCTCCGCGCACCTCACCCAGACATGTTCAAGGAG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCTCCTTGAACATGTCTaGGTGAGGTGCGCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPLLEHV*VRCAED
Trigger: GTCCTCCGCGCACCTCACCCAGACATGTTCAAGGAG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCCAGGATGCATTCCTaGTACAGCGGGGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSARMHS*YSGDFR
Trigger: TCTGAAGTCCCCGCTGTACCAGGAATGCATCCTGGC...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCGCCAGGATGCATTCCTaGTACAGCGGGGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: SRAAGDLLRVRECTALHFARMHS*YSGDFR
Trigger: TCTGAAGTCCCCGCTGTACCAGGAATGCATCCTGGC...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCTGGAAGCCGGGCTGCTaGGGACCTGCTGCGAGTCCG +
Preference number: 4 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPWKPGC*GPAASP
Trigger: CGGACTCGCAGCAGGTCCCCAGCAGCCCGGCTTCCA...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTGGCGTGGACACACTaGAGTGGTCTGAACCGAGGC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARLAWTH*SGLNRG
Trigger: GCCTCGGTTCAGACCACTCCAGTGTGTCCACGCCAA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTTGGCGTGGACACACTaGAGTGGTCTGAACCGAGGC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGLAWTH*SGLNRG
Trigger: GCCTCGGTTCAGACCACTCCAGTGTGTCCACGCCAA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTTGGCGTGGACACACTaGAGTGGTCTGAACCGAGGC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPLAWTH*SGLNRG
Trigger: GCCTCGGTTCAGACCACTCCAGTGTGTCCACGCCAA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGCTCCCTCTTTTTCTaGGACCTCCCGGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARCSLFF*DLPVLL
Trigger: CAGGAGCACCGGGAGGTCCCAGAAAAAGAGGGAGCA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACACCTTTCCCTACCGGACACAGGCCTCCATTaGCATGCAGGGCGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: GWPRRPRPSDPWKHLSLPDTGLH*HAGRRL
Trigger: CAGACGACGCCCTGCATGCCAATGGAGGCCTGTGTC...CGGTAGGGAAAGGTGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCTTGGCCACAGCAGCTaGAGTGGGGAGGGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPLGHSS*SGEGEF
Trigger: GAACTCACCCTCCCCACTCCAGCTGCTGTGGCCAAG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp ACCTCGCTGCAGGCACTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCCACTGCTCGCCAGGCTaGGAGGCGCTCTCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: TSLQALPRIIPARASQDTHCSPG*EALSRP
Trigger: CGGCCGGGAGAGCGCCTCCCAGCCTGGCGAGCAGTG...GGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGGTGGAGGCTGCAGAGTGGCACCGGTGGGCATGCCAGGCACCTCAGGCTTTCTTCATCCTCCACCGTCTaGATGCCCCCGGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GWRLQSGTGGHARHLRLSSSSTV*MPPAST
Trigger: AGTGGAGGCCGGGGGCATCCAGACGGTGGAGGATGA...AGAAAGCCTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGATGGGTCCCACTTCCTaGTCTGGAAGGTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARMGPTS*SGRSWH
Trigger: GTGCCAGGACCTTCCAGACCAGGAAGTGGGACCCAT...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTATGGGTCCCACTTCCTaGTCTGGAAGGTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGMGPTS*SGRSWH
Trigger: GTGCCAGGACCTTCCAGACCAGGAAGTGGGACCCAT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGCCTGTCCCGAAAGCGTaGATCCGTAGCCGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LSRLFRGRACVWEPSPAMPVPKA*IRSRPS
Trigger: GGAGGGCCGGCTACGGATTCACGCTTTCGGGACAGG...CATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGCACACAGTCGTGCATaGTCTTCATGGTCACCAGCG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARAHSRA*SSWSPA
Trigger: CGCTGGTGACCATGAAGATCATGCACGACTGTGTGC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGCACACAGTCGTGCATaGTCTTCATGGTCACCAGCG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGAHSRA*SSWSPA
Trigger: CGCTGGTGACCATGAAGATCATGCACGACTGTGTGC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCTTGGATCTCCCAAATaGTCTCCGAGCAGACGTGCG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPLGSPK*SPSRRA
Trigger: CGCACGTCTGCTCGGAGATCATTTGGGAGATCCAAG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCTCAGGCTGTTGTTGCTaGCGCAGTCCTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSSGCCC*RSPSGR
Trigger: CCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGA...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCGCAGCTGCTGCTCCTTaGACATGTCTGGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSAAAAP*TCLGEV
Trigger: CACCTCACCCAGACATGTTCAAGGAGCAGCAGCTGC...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCACACTGGAGTGGTCTaGACCGAGGCTGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPHTGVV*TEAVLG
Trigger: TCCAAGCACAGCCTCGGTTCAGACCACTCCAGTGTG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGGACCCCGCGGCCGCCCCGTTaGTGCCATGCCGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: LTRPNLTAGLSLLSASWTPRPPR*CHAAHR
Trigger: TCTGTGAGCGGCATGGCATCAACGGGGCGGCCGCGG...GGTCCAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGGCCTTGAGTCCCACTaGCCGGTTAATCGGAACAAG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPGLESH*PVNRNK
Trigger: CTTGTTCCGATTAACCGGTCAGTGGGACTCAAGGCC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp TCCTCTCTCCAGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACAGCCCACTGTCCTTTCTaGCTGGAAGCTGAGCAGACC +
Preference number: 4 (lower is better)
Translates to: SSLQGMATQATALGPLETAHCPF*LEAEQT
Trigger: GGTCTGCTCAGCTTCCAGTCAGAAAGGACAGTGGGC...TGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCATCAAGGGCTCTGAATTaGTCGCACAAAGGCTCGGGT +
Preference number: 4 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPSRALN*SHKGSG
Trigger: ACCCGAGCCTTTGTGCGAGCAATTCAGAGCCCTTGA...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GGCACTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCAGGATGCCTGCCCCGCAGGCGCCGCATaGAGCCGCGGATGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: GTATYHSCKSLSGHQDACPAGAA*SRGWLA
Trigger: TGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGG...GCAGGCATCCTGGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCACTGTTGCTGCTGGTaGTGTTGTTCTGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAHCCCW*CCSGGH
Trigger: ATGCCCACCAGAACAACAGCACCAGCAGCAACAGTG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGGTGGAAGTTCCCAATaGCGCTGTCACTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGGGSSQ*RCHCCC
Trigger: GCAGCAACAGTGACAGCGGCATTGGGAACTTCCACC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCCACAAGGACCCGGTTaGTCTTCTCCTCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPPQGPG*SSPPGG
Trigger: TCCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGAGGCTGGCCCTAGGTaGTTGTTTAGGTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPAREAGPR*LFRSQN
Trigger: GTTCTGGGACCTAAACAAGCACCTAGGGCCAGCCTC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGAGGCTGGCCCTAGGTaGTTGTTTAGGTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEEAGPR*LFRSQN
Trigger: GTTCTGGGACCTAAACAAGCACCTAGGGCCAGCCTC...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTCTGCGTGGTCCCCGTaGTCCCTCTTTTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPSAWSP*SLFFWD
Trigger: GTCCCAGAAAAAGAGGGAGCACGGGGACCACGCAGA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CGGCGAGGTCCAGGCTACAGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCTCCAGATCTGGGCGGTaGCCTCCTGCGCGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: RRGPGYRSDKTKPHGRPLSRSGR*PPARGR
Trigger: TCTCCCTCGCGCAGGAGGGCACCGCCCAGATCTGGA...GAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGACCTCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTATGGCAACAGGACACTaGAGGAAGCTGTGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGMATGH*RKLWLA
Trigger: GGCAAGCCACAGCTTCCTGCAGTGTCCTGTTGCCAT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS-3UTR GCA 90 bp GGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACACCTTTCCCTACCGGTTCCCAGACCTCGCTaGAGGCACTGCCACGTATCA +
Preference number: 4 (lower is better)
Translates to: GWPRRPRPSDPWKHLSLPVPRPR*RHCHVS
Trigger: TGATACGTGGCAGTGCCTGCAGCGAGGTCTGGGAAC...CGGTAGGGAAAGGTGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGTTGACAGCAAGTATCTaGTCTCCAGCTCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LGTCCESGSARPSTSARMLTASI*SPARRP
Trigger: GGGCCTCCGAGCTGGAGACCAGATACTTGCTGTCAA...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCCCCTTCTTCATCACTaGAACAGGATTCGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSPLLHH*NRIRSG
Trigger: GCCGCTTCGAATCCTGTTCCAGTGATGAAGAAGGGG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTGTCGGACTCCAGGTTaGAGCTCGTGGAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGCRTPG*SSWKEA
Trigger: AGCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTGTCGGACTCCAGGTTaGAGCTCGTGGAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPCRTPG*SSWKEA
Trigger: AGCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CACCTGCTACGGGGGCCGCCGGTGGGTCCGAGCTGCACTCTCAAGGCTCTTCCGTGTCGGACTCCAGGTTaGAGCTCGTGGAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: HLLRGPPVGPSCTLKALPCRTPG*SSWKEA
Trigger: AGCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACA...CGGAAGAGCCTTGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTTGTCGGACTCCAGGTTaGAGCTCGTGGAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAACRTPG*SSWKEA
Trigger: AGCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACA...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGATGGTCACCAGCGAGTaGATTTTCTGCTCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEMVTSE*IFCSAR
Trigger: GCGGGCAGAGCAGAAAATCCACTCGCTGGTGACCAT...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGATGGTCACCAGCGAGTaGATTTTCTGCTCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LGTCCESGSARPSTSARMMVTSE*IFCSAR
Trigger: GCGGGCAGAGCAGAAAATCCACTCGCTGGTGACCAT...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCTCTTCTCCTCCTGGTaGAAGTTCCCAATGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGLFSSW*KFPMPL
Trigger: CAGCGGCATTGGGAACTTCCACCAGGAGGAGAAGAG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCTCTTCTCCTCCTGGTaGAAGTTCCCAATGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSELFSSW*KFPMPL
Trigger: CAGCGGCATTGGGAACTTCCACCAGGAGGAGAAGAG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGCTCTTCTCCTCCTGGTaGAAGTTCCCAATGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LGTCCESGSARPSTSARMLFSSW*KFPMPL
Trigger: CAGCGGCATTGGGAACTTCCACCAGGAGGAGAAGAG...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTTGCTCTTCTCCTCCTaGTGGAAGTTCCCAATGCCG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPALLFSS*WKFPMP
Trigger: CGGCATTGGGAACTTCCACCAGGAGGAGAAGAGCAA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTTGCTCTTCTCCTCCTaGTGGAAGTTCCCAATGCCG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSLLFSS*WKFPMP
Trigger: CGGCATTGGGAACTTCCACCAGGAGGAGAAGAGCAA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp TCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTCATGAGCGGCCTCAAATaGGGGGCTCCCTTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SPPAANHSRGVHAPLSTLMSGLK*GAPFGV
Trigger: GACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCAT...GAGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGGTGGAGGCTGCAGAGTGGCACCGGTGGGCATGCCAGGCACCTCAGGCTTTCTACCGGGAGCCAGCGCTaGTTGAAACCACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GWRLQSGTGGHARHLRLSTGSQR*LKPQPA
Trigger: TGCTGGCTGTGGTTTCAACCAGCGCTGGCTCCCGGT...AGAAAGCCTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGTGGACCAGCCATCGGTaGAATCTGTGTAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: PGCWGPAASPGVHGPPLPWTSHR*NLCKSP
Trigger: AGGACTCTTACACAGATTCCACCGATGGCTGGTCCA...CGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTACGTCGTCTGCTAGCTaGGCCTGGCTGTCGATGTTG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPTSSAS*AWLSML
Trigger: CAACATCGACAGCCAGGCCCAGCTAGCAGACGACGT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCTCCTTGAACATGTCTaGGTGAGGTGCGCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPLLEHV*VRCAED
Trigger: GTCCTCCGCGCACCTCACCCAGACATGTTCAAGGAG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp ACCCGCGGTCAGAGAGCGCTGCTGACGTCACCTCCACTCCCGAGCACCCACACCCTCCTTGAACATGTCTaGGTGAGGTGCGCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: TRGQRALLTSPPLPSTHTLLEHV*VRCAED
Trigger: GTCCTCCGCGCACCTCACCCAGACATGTTCAAGGAG...GGTGTGGGTGCTCGGGAGTGGAGGTGACGTCAGCAGCGCTCTCTGACCGCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGCCAGGATGCATTCCTaGTACAGCGGGGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARARMHS*YSGDFR
Trigger: TCTGAAGTCCCCGCTGTACCAGGAATGCATCCTGGC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CGGGGGCCCACTGTCCTTTCTGACTGGAAGCTGAGCAGACCACGCTTACGGGGCAACCGAGGCTGTGCTTaGAAGCCGGGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RGPTVLSDWKLSRPRLRGNRGCA*KPGCWG
Trigger: TCCCCAGCAGCCCGGCTTCCAAGCACAGCCTCGGTT...GCCCCGTAAGCGTGGTCTGCTCAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTGCTCCCTCTTTTTCTaGGACCTCCCGGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPCSLFF*DLPVLL
Trigger: CAGGAGCACCGGGAGGTCCCAGAAAAAGAGGGAGCA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCATGCCAGGCACCTCAGGCTTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGGGTCCAGGCCGTATCTaGCCACCACGGGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: GMPGTSGFLIQACPGCERGPGRI*PPRAAA
Trigger: TGCTGCGGCCCGTGGTGGCCAGATACGGCCTGGACC...CCTTTCACAGCCAGGACACGCCTGGATGAGAAAGCCTGAGGTGCCTGGCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCTTAGCAGCCCACGTTaGTCATCTGCTCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSLSSPR*SSALLL
Trigger: GAGCAACAGAGCAGATGACCAACGTGGGCTGCTAAG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CGGCGAGGTCCAGGCTACAGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCTGCCTCTTCCAGATCTaGGCGGTGCCCTCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: RRGPGYRSDKTKPHGRPLCLFQI*AVPSCA
Trigger: CGCGCAGGAGGGCACCGCCCAGATCTGGAAGAGGCA...GAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGACCTCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTCCCACTTCCTGGTCTaGAAGGTCCTGGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSHFLV*KVLALP
Trigger: AGGAAGTGCCAGGACCTTCCAGACCAGGAAGTGGGA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTCCCACTTCCTGGTCTaGAAGGTCCTGGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPSHFLV*KVLALP
Trigger: AGGAAGTGCCAGGACCTTCCAGACCAGGAAGTGGGA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCCCACTTCCTGGTCTaGAAGGTCCTGGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARSHFLV*KVLALP
Trigger: AGGAAGTGCCAGGACCTTCCAGACCAGGAAGTGGGA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGATGATTCTGTTGACTaGGAGGTCTCGGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPADDSVD*EVSAAM
Trigger: CATGGCAGCCGAGACCTCCCAGTCAACAGAATCATC...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGATGATTCTGTTGACTaGGAGGTCTCGGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSDDSVD*EVSAAM
Trigger: CATGGCAGCCGAGACCTCCCAGTCAACAGAATCATC...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCATGCCAGGCACCTCAGGCTTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGTACGGGGGCCGCCGGTaGGTCCGAGCTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: GMPGTSGFLIQACPGCERYGGRR*VRAALS
Trigger: TGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTA...CCTTTCACAGCCAGGACACGCCTGGATGAGAAAGCCTGAGGTGCCTGGCATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CAGGGTGTTCCCAGACCTCGCTGCAGGCACTGCCACGTATCATTCCTGCAAGAGCCTCTCTCCAGGGGATaGCCACGCAGGCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: QGVPRPRCRHCHVSFLQEPLSRG*PRRPRP
Trigger: GGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGG...CTCTTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGGTCTGGGAACACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCCCTTGGTGGATCTTGTaGTTAAACAAGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: AGLLGTCCESGSARPSTSPWWIL*LNKSGS
Trigger: GGACCCAGACTTGTTTAATCACAAGATCCACCAAGG...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp ACACCACCTGCTACGGGGGCCGCCGGTGGGTCCGAGCTGCACTCTCAAGGCTCTCTTGGATCTCCCAAATaGTCTCCGAGCAGACGTGCG +
Preference number: 4 (lower is better)
Translates to: TPPATGAAGGSELHSQGSLGSPK*SPSRRA
Trigger: CGCACGTCTGCTCGGAGATCATTTGGGAGATCCAAG...AGAGCCTTGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTGCAGAGAAACTTACTaGAAATCTCCCGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSCRETY*KSPGPC
Trigger: ACAGGGCCCGGGAGATTTTCAGTAAGTTTCTCTGCA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GACACTGGCCTGGGGCCACACGAGCCCCTCCTTTCCAAGAGGGCCAAGGAAGCCGTCCCATCCGGGAGATaGATGCAGCAGTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: DTGLGPHEPLLSKRAKEAVPSGR*MQQCLV
Trigger: CACCAAGCACTGCTGCATTCATCTCCCGGATGGGAC...GGCTTCCTTGGCCCTCTTGGAAAGGAGGGGCTCGTGTGGCCCCAGGCCAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGGCCTTGAGTCCCACTaGCCGGTTAATCGGAACAAG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPGLESH*PVNRNK
Trigger: CTTGTTCCGATTAACCGGTCAGTGGGACTCAAGGCC...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp AGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACGTCAGAGAGCGCTGCTaGCGTCACCTCCACTCCCGA +
Preference number: 4 (lower is better)
Translates to: RTGLCLGALSCYEHSGLHVRERC*RHLHSR
Trigger: TCGGGAGTGGAGGTGACGTCAGCAGCGCTCTCTGAC...GTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp TCCTCTCTCCAGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACATCCAGGCTACAGGTCTaGCAAGACCAAACCTCACGG +
Preference number: 4 (lower is better)
Translates to: SSLQGMATQATALGPLETSRLQV*QDQTSR
Trigger: CCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGA...TGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTCAAGGGCTCTGAATTaGTCGCACAAAGGCTCGGGT +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSRALN*SHKGSG
Trigger: ACCCGAGCCTTTGTGCGAGCAATTCAGAGCCCTTGA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCAAGGGCTCTGAATTaGTCGCACAAAGGCTCGGGT +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARSRALN*SHKGSG
Trigger: ACCCGAGCCTTTGTGCGAGCAATTCAGAGCCCTTGA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCAGCTGCACACAGTCGTaGATGATCTTCATGGTCACC +
Preference number: 4 (lower is better)
Translates to: SRAAGDLLRVRECTALHFSCTQS*MIFMVT
Trigger: GGTGACCATGAAGATCATGCACGACTGTGTGCAGCT...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCCGTCGTCATTCGTCTaGATGGTAACCAACCCGAAA +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAPSSFV*MVTNPK
Trigger: TTTCGGGTTGGTTACCATGCAGACGAATGACGACGG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCAAACCGCCGAGCAATaGCTTGGTGGATCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: SRAAGDLLRVRECTALHFQTAEQ*LGGSCD
Trigger: ATCACAAGATCCACCAAGGCATTGCTCGGCGGTTTG...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCACTGTTGCTGCTGGTaGTGTTGTTCTGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPHCCCW*CCSGGH
Trigger: ATGCCCACCAGAACAACAGCACCAGCAGCAACAGTG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCGCTGTCACTGTTGCTaGTGGTGCTGTTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARRCHCC*WCCCSG
Trigger: ACCAGAACAACAGCACCAGCAGCAACAGTGACAGCG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGCCGCTGTCACTGTTaGTGCTGGTGCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARCRCHC*CWCCCS
Trigger: AGAACAACAGCACCAGCAGCAACAGTGACAGCGGCA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp GGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACACCTTTCCCTACCGGGTGGAAGTTCCCAATaGCGCTGTCACTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GWPRRPRPSDPWKHLSLPGGSSQ*RCHCCC
Trigger: GCAGCAACAGTGACAGCGGCATTGGGAACTTCCACC...CGGTAGGGAAAGGTGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCGGTGGAAGTTCCCAATaGCGCTGTCACTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSGGSSQ*RCHCCC
Trigger: GCAGCAACAGTGACAGCGGCATTGGGAACTTCCACC...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp CTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCAGGATGCCTGCCCAGCTGCTGGGGACCTGCTaGGAGTCCGGGAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: LPRIIPARASQDTRMPAQLLGTC*ESGSAR
Trigger: CCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAG...CTGGGCAGGCATCCTGGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCATCCGGGAGATGAATaGAGCAGTGCTTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPHPGDE*SSAWWP
Trigger: AGGCCACCAAGCACTGCTGCATTCATCTCCCGGATG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTATGCTACTGTCTTGGTaGAGCACCAGAGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGMLLSW*STRGLS
Trigger: GGACAAGCCTCTGGTGCTGCACCAAGACAGTAGCAT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCCAGCCGAAACAAGGTaGGCTTTTCTAGGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPPAETR*AFLGAG
Trigger: ACCTGCGCCTAGAAAAGCGCACCTTGTTTCGGCTGG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGTGGAGGCTGCAGAGTGGCACCGGTGGGCATGCCAGGCACCTCAGGCTTTCTCTGGGAGCCCTCTCCTaGTATGAACACAGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: GWRLQSGTGGHARHLRLSLGALS*YEHSGL
Trigger: AAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAG...AGAAAGCCTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp ATCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTCCGGTGGGTCCGAGCTaGACTCTCAAGGCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: IAPSSKPQQRCPRTPEHTPVGPS*TLKALP
Trigger: CGGAAGAGCCTTGAGAGTGCAGCTCGGACCCACCGG...AGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACCCTTTCCCTACCGGCTaGTGGGAGCCTCGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: RTGLCLGALSCYEHSGLHPFPTG*WEPRLS
Trigger: ACTGAGGCGAGGCTCCCAGCAGCCGGTAGGGAAAGG...GTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACTGGCACCGGTGGGCATaGCAGGCACCTCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RTGLCLGALSCYEHSGLHWHRWA*QAPQAF
Trigger: GAAAGCCTGAGGTGCCTGGCATGCCCACCGGTGCCA...GTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTTGACAGCAAGTATCTaGTCTCCAGCTCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPLTASI*SPARRP
Trigger: GGGCCTCCGAGCTGGAGACCAGATACTTGCTGTCAA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCCCCTTCTTCATCACTaGAACAGGATTCGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARPLLHH*NRIRSG
Trigger: GCCGCTTCGAATCCTGTTCCAGTGATGAAGAAGGGG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGCCCCTTCTTCATCACTaGAACAGGATTCGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: LGTCCESGSARPSTSARMPLLHH*NRIRSG
Trigger: GCCGCTTCGAATCCTGTTCCAGTGATGAAGAAGGGG...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCATGGAAGGAAGCTCAATaGAGCCTAAGTAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPWKEAQ*SLSSPR
Trigger: TCGTGGGCTACTTAGGCTCCATTGAGCTTCCTTCCA...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTACAGCCATTGGTGTCTaGGTCGGCCGTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPTAIGV*VGRALK
Trigger: TTTGAGTGCACGGCCGACCCAGACACCAATGGCTGT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCGTGCTGTTGTTCTGGTaGGCATCGGCGTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPVLLFW*ASASPS
Trigger: GGACGGGGACGCCGATGCCCACCAGAACAACAGCAC...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTGTCACTGTTGCTGCTaGTGCTGTTGTTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSECHCCC*CCCSGG
Trigger: CCCACCAGAACAACAGCACCAGCAGCAACAGTGACA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTGGACCAGCCATCGGTaGAATCTGTGTAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAWTSHR*NLCKSP
Trigger: AGGACTCTTACACAGATTCCACCGATGGCTGGTCCA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCAGGATGCCTGCCCAGTGGAAGCCGGGCTGCTaGGGACCTGCTGCGAGTCCG +
Preference number: 4 (lower is better)
Translates to: LPRIIPARASQDTRMPAQWKPGC*GPAASP
Trigger: CGGACTCGCAGCAGGTCCCCAGCAGCCCGGCTTCCA...CTGGGCAGGCATCCTGGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTCTCCCGTAGCCGAGTaGTTTCTGGAGCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSSPVAE*FLELEF
Trigger: AAATTCCAGCTCCAGAAACCACTCGGCTACGGGAGA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTCTCCCGTAGCCGAGTaGTTTCTGGAGCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPASPVAE*FLELEF
Trigger: AAATTCCAGCTCCAGAAACCACTCGGCTACGGGAGA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCTTAGCAGCCCACGTTaGTCATCTGCTCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSELSSPR*SSALLL
Trigger: GAGCAACAGAGCAGATGACCAACGTGGGCTGCTAAG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GTCCAGGCTACAGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGAGGGAGACGGGGGACTaGGGAGTGCAGAAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: VQATGLTRPNLTAGLSLLRETGD*GVQKGP
Trigger: CGGGCCCTTCTGCACTCCCCAGTCCCCCGTCTCCCT...CAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGATGATTCTGTTGACTaGGAGGTCTCGGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARDDSVD*EVSAAM
Trigger: CATGGCAGCCGAGACCTCCCAGTCAACAGAATCATC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTCAGAAATGCTTTATTaGGCAGCAGGAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSESEMLY*AAGGQG
Trigger: GCCCTGGCCTCCTGCTGCCCAATAAAGCATTTCTGA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCAGAAATGCTTTATTaGGCAGCAGGAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARSEMLY*AAGGQG
Trigger: GCCCTGGCCTCCTGCTGCCCAATAAAGCATTTCTGA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCACTGCAGGAAGCTGTaGCTTGCCAGGGTTTCAGAC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPHCRKL*LARVSD
Trigger: GTCTGAAACCCTGGCAAGCCACAGCTTCCTGCAGTG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTCCCTTCGTAACCCATaGCAACAGGACACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSLRNP*QQDTAG
Trigger: TCCTGCAGTGTCCTGTTGCCATGGGTTACGAAGGGA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS-3UTR TCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTCAGCAATCACCATGTaGAGGACACCAGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPSAITM*RTPEHF
Trigger: GAAGTGCTCTGGTGTCCTTCACATGGTGATTGCTGA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCAATTTCAAGGGCTCTaGATTGCTCGCACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: SRAAGDLLRVRECTALHFQFQGL*IARTKA
Trigger: AGCCTTTGTGCGAGCAATTCAGAGCCCTTGAAATTG...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTTGCGGCCGACTCTaGAAGGGATCTTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPASCGRL*KGSLFQ
Trigger: TTGAAACAAAGATCCCTTTCAGAGTCGGCCGCAACT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGCAGAGAAACTTACTaGAAATCTCCCGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARCRETY*KSPGPC
Trigger: ACAGGGCCCGGGAGATTTTCAGTAAGTTTCTCTGCA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTTGCAGAGAAACTTACTaGAAATCTCCCGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAACRETY*KSPGPC
Trigger: ACAGGGCCCGGGAGATTTTCAGTAAGTTTCTCTGCA...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGAGATTCTTCTCTCTTTaGAAGCCGGGGATCCCTAGC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARRFFSL*KPGIPS
Trigger: GCTAGGGATCCCCGGCTTTCAAAGAGAGAAGAATCT...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTAGATTCTTCTCTCTTTaGAAGCCGGGGATCCCTAGC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPRFFSL*KPGIPS
Trigger: GCTAGGGATCCCCGGCTTTCAAAGAGAGAAGAATCT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CACCTGCTACGGGGGCCGCCGGTGGGTCCGAGCTGCACTCTCAAGGCTCTTCCGAGATTCTTCTCTCTTTaGAAGCCGGGGATCCCTAGC +
Preference number: 4 (lower is better)
Translates to: HLLRGPPVGPSCTLKALPRFFSL*KPGIPS
Trigger: GCTAGGGATCCCCGGCTTTCAAAGAGAGAAGAATCT...CGGAAGAGCCTTGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp GTCCAGGCTACAGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGGGCGTGTCCTGGCTGTaGAAGGGACCAGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: VQATGLTRPNLTAGLSLLGVSWL*KGPGSP
Trigger: GGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCC...CAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAAAATTCCACCAGACTaGATTTCCTCCACGACTCGC +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAKIPPD*ISSTTR
Trigger: GCGAGTCGTGGAGGAAATGCAGTCTGGTGGAATTTT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACGTGGATTTTCTGCTCTaGCCGCAGGCGCCGCATGCA +
Preference number: 4 (lower is better)
Translates to: RTGLCLGALSCYEHSGLHVDFLL*PQAPHA
Trigger: TGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCAC...GTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTAGCTGCACACAGTCGTaGATGATCTTCATGGTCACC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPSCTQS*MIFMVT
Trigger: GGTGACCATGAAGATCATGCACGACTGTGTGCAGCT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTAGCTGCACACAGTCGTaGATGATCTTCATGGTCACC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSCTQS*MIFMVT
Trigger: GGTGACCATGAAGATCATGCACGACTGTGTGCAGCT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTGTCAGTGCTCAGCTaGACACAGTCGTGCATGATC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARLSVLS*TQSCMI
Trigger: GATCATGCACGACTGTGTGCAGCTGAGCACTGACAA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTTGTCAGTGCTCAGCTaGACACAGTCGTGCATGATC +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSELSVLS*TQSCMI
Trigger: GATCATGCACGACTGTGTGCAGCTGAGCACTGACAA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGTTGTCAGTGCTCAGCTaGACACAGTCGTGCATGATC +
Preference number: 4 (lower is better)
Translates to: LGTCCESGSARPSTSARMLSVLS*TQSCMI
Trigger: GATCATGCACGACTGTGTGCAGCTGAGCACTGACAA...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCCGTCGTCATTCGTCTaGATGGTAACCAACCCGAAA +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEPSSFV*MVTNPK
Trigger: TTTCGGGTTGGTTACCATGCAGACGAATGACGACGG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCAAACCGCCGAGCAATaGCTTGGTGGATCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARQTAEQ*LGGSCD
Trigger: ATCACAAGATCCACCAAGGCATTGCTCGGCGGTTTG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCAAACCGCCGAGCAATaGCTTGGTGGATCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPQTAEQ*LGGSCD
Trigger: ATCACAAGATCCACCAAGGCATTGCTCGGCGGTTTG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCGCTGTCACTGTTGCTaGTGGTGCTGTTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPRCHCC*WCCCSG
Trigger: ACCAGAACAACAGCACCAGCAGCAACAGTGACAGCG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTGCCGCTGTCACTGTTaGTGCTGGTGCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPCRCHC*CWCCCS
Trigger: AGAACAACAGCACCAGCAGCAACAGTGACAGCGGCA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCTGCCGCTGTCACTGTTaGTGCTGGTGCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSCRCHC*CWCCCS
Trigger: AGAACAACAGCACCAGCAGCAACAGTGACAGCGGCA...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGAAGATCTGCAGCTGCTaGTCCTTGAACATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARKICSC*SLNMSG
Trigger: CCCAGACATGTTCAAGGAGCAGCAGCTGCAGATCTT...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTAAGATCTGCAGCTGCTaGTCCTTGAACATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAAKICSC*SLNMSG
Trigger: CCCAGACATGTTCAAGGAGCAGCAGCTGCAGATCTT...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp CTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGCCACTTCCGCCAGGATaGATTCCTGGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LSRLFRGRACVWEPSPAMPLPPG*IPGTAG
Trigger: CCCCGCTGTACCAGGAATGCATCCTGGCGGAAGTGG...CATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp TGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACTTCCTCACTCGGGCTGCTGGGGACCTaGTGCGAGTCCGGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: CVWEPSPAMNTAGFTSSLGLLGT*CESGSA
Trigger: TGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCC...GAGTGAGGAAGTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCCCTTGACTCCAAGATaGTACTGTCTTGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARPLTPR*YCLGAA
Trigger: TGCTGCACCAAGACAGTAGCATCTTGGAGTCAAGGG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCCCTTGACTCCAAGATaGTACTGTCTTGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPPLTPR*YCLGAA
Trigger: TGCTGCACCAAGACAGTAGCATCTTGGAGTCAAGGG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CACCTGCTACGGGGGCCGCCGGTGGGTCCGAGCTGCACTCTCAAGGCTCTTCCGCCCTTGACTCCAAGATaGTACTGTCTTGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HLLRGPPVGPSCTLKALPPLTPR*YCLGAA
Trigger: TGCTGCACCAAGACAGTAGCATCTTGGAGTCAAGGG...CGGAAGAGCCTTGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCTGTTTATCTGCGGATaGCTTTCCTCTGGAAGGATC +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPALFICG*LSSGRI
Trigger: GATCCTTCCAGAGGAAAGGCATCCGCAGATAAACAG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp TTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGGACCAGGTAGCCCCTCCCATGTGGACGGGCTGTCGCTaGTCTCCTGGACTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FLIQACPGCERDQVAPPMWTGCR*SPGLAP
Trigger: GGGAGCCAGTCCAGGAGAGCAGCGACAGCCCGTCCA...CATGGGAGGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCCTGGATGAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCAGGAAGCTGTGGCTTaGCAGGGTTTCAGACTCTAT +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEQEAVA*QGFRLY
Trigger: ATAGAGTCTGAAACCCTGGCAAGCCACAGCTTCCTG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS-3UTR GCA 90 bp ATCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTACAGATCTACAGACGTaGACTCCCTGGTCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: IAPSSKPQQRCPRTPEHTTDLQT*TPWSPG
Trigger: GCCGGGGGACCAGGGAGTGCACGTCTGTAGATCTGT...AGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GCACACTCCATGACGCGCACCCTGAGCGGCTCCTCTCTCCAGGGGATGGCCACGCCCCTTCTTCATCACTaGAACAGGATTCGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: AHSMTRTLSGSSLQGMATPLLHH*NRIRSG
Trigger: GCCGCTTCGAATCCTGTTCCAGTGATGAAGAAGGGG...CGTGGCCATCCCCTGGAGAGAGGAGCCGCTCAGGGTGCGCGTCATGGAGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTGGAAGGAAGCTCAATaGAGCCTAAGTAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGWKEAQ*SLSSPR
Trigger: TCGTGGGCTACTTAGGCTCCATTGAGCTTCCTTCCA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCTCCACCATGAACACGTaGCAGGAAGTCCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPSTMNT*QEVRRA
Trigger: CGCCCTGCGGACTTCCTGCCACGTGTTCATGGTGGA...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTGTCACTGTTGCTGCTaGTGCTGTTGTTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPCHCCC*CCCSGG
Trigger: CCCACCAGAACAACAGCACCAGCAGCAACAGTGACA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCTGTCACTGTTGCTGCTaGTGCTGTTGTTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSCHCCC*CCCSGG
Trigger: CCCACCAGAACAACAGCACCAGCAGCAACAGTGACA...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp TGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACTTCCTCACTCAAGACACACTCCCGGAGCACGTaGACCGGGAGCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: WEPSPAMNTAGFTSSLKTHSRST*TGSQRW
Trigger: CCAGCGCTGGCTCCCGGTCCACGTGCTCCGGGAGTG...TGTCTTGAGTGAGGAAGTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGGACCAGCCATCGGTaGAATCTGTGTAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARWTSHR*NLCKSP
Trigger: AGGACTCTTACACAGATTCCACCGATGGCTGGTCCA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCAGGATGCCTGCCCAGAGGACACGGCCCAGCTaGCGACCCTCCTCTCACGCA +
Preference number: 4 (lower is better)
Translates to: LPRIIPARASQDTRMPAQRTRPS*RPSSHA
Trigger: TGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCT...CTGGGCAGGCATCCTGGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGAAGATGCTACTGTCTTaGTGCAGCACCAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEKMLLS*CSTRGL
Trigger: CAAGCCTCTGGTGCTGCACCAAGACAGTAGCATCTT...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGAAGATGCTACTGTCTTaGTGCAGCACCAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARKMLLS*CSTRGL
Trigger: CAAGCCTCTGGTGCTGCACCAAGACAGTAGCATCTT...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCTTAGCAGCCCACGTTaGTCATCTGCTCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPLSSPR*SSALLL
Trigger: GAGCAACAGAGCAGATGACCAACGTGGGCTGCTAAG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTCAGAAATGCTTTATTaGGCAGCAGGAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPSEMLY*AAGGQG
Trigger: GCCCTGGCCTCCTGCTGCCCAATAAAGCATTTCTGA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp TTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGGACCAGGTAGCCCCTCCCATGGCAGAGTGGCACCGGTaGGCATGCCAGGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: FLIQACPGCERDQVAPPMAEWHR*ACQAPQ
Trigger: CTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGC...CATGGGAGGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCCTGGATGAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTCAGCAATCACCATGTaGAGGACACCAGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPSAITM*RTPEHF
Trigger: GAAGTGCTCTGGTGTCCTTCACATGGTGATTGCTGA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCAATTTCAAGGGCTCTaGATTGCTCGCACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEQFQGL*IARTKA
Trigger: AGCCTTTGTGCGAGCAATTCAGAGCCCTTGAAATTG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCAATTTCAAGGGCTCTaGATTGCTCGCACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPQFQGL*IARTKA
Trigger: AGCCTTTGTGCGAGCAATTCAGAGCCCTTGAAATTG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCCTTGGTGGATCTTGTaGTTAAACAAGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPPWWIL*LNKSGS
Trigger: GGACCCAGACTTGTTTAATCACAAGATCCACCAAGG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGTCATGTGCAGGAACATaGTTAAAATATTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGSCAGT*LKYSQA
Trigger: GGCCTGTGAATATTTTAATCATGTTCCTGCACATGA...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp GTCCAGGCTACAGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGCCTGGCTGTCGATGTTaGCCGGGGTGGTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: VQATGLTRPNLTAGLSLLPGCRC*PGWWLC
Trigger: GCAAAGCCACCACCCCGGTCAACATCGACAGCCAGG...CAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CCACCAGCAAACAGTGGCAGCCGGGGGCCCACTGTCCTTTCTGACTGGAAGCTGGCAGCTGCTGCTCCTTaGACATGTCTGGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PPANSGSRGPTVLSDWKLAAAAP*TCLGEV
Trigger: CACCTCACCCAGACATGTTCAAGGAGCAGCAGCTGC...CAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCGGCTGCCACTGTTTGCTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTAGATTCTTCTCTCTTTaGAAGCCGGGGATCCCTAGC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPRFFSL*KPGIPS
Trigger: GCTAGGGATCCCCGGCTTTCAAAGAGAGAAGAATCT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTCTGCTCTGTTGCTCTaGGCTTTGGAAATAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSSALLL*ALEISS
Trigger: TGAGCTTATTTCCAAAGCTCAGAGCAACAGAGCAGA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCGCAGCTTGTGCGTGTaGGAAAAGTTTAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPARSLCV*EKFKGI
Trigger: AATGCCTTTAAACTTTTCTCACACGCACAAGCTGCG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS-3UTR GCA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTAAAATTCCACCAGACTaGATTTCCTCCACGACTCGC +
Preference number: 4 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAAKIPPD*ISSTTR
Trigger: GCGAGTCGTGGAGGAAATGCAGTCTGGTGGAATTTT...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GCCTCTCACTGCTGTCAGCATCCTGGACCAGGGCACAGGACGGAGAGGCGCTCCTCAAGGGCTCTGAATTaGTCGCACAAAGGCTCGGGT +
Preference number: 4 (lower is better)
Translates to: ASHCCQHPGPGHRTERRSSRALN*SHKGSG
Trigger: ACCCGAGCCTTTGTGCGAGCAATTCAGAGCCCTTGA...GGAGCGCCTCTCCGTCCTGTGCCCTGGTCCAGGATGCTGACAGCAGTGAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AATGCCCGTGACACCCGCGGTCAGAGAGCGCTGCTGACGTCACCTCCACTCCCGTGCCGCTGTCACTGTTaGTGCTGGTGCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: NARDTRGQRALLTSPPLPCRCHC*CWCCCS
Trigger: AGAACAACAGCACCAGCAGCAACAGTGACAGCGGCA...CGGGAGTGGAGGTGACGTCAGCAGCGCTCTCTGACCGCGGGTGTCACGGGCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGCCACAAGGACCCGGTTaGTCTTCTCCTCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LSRLFRGRACVWEPSPAMPQGPG*SSPPGG
Trigger: TCCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGG...CATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGCACCCTGTAGCGGTCTaGGGGGATCTTGCTCATAGG +
Preference number: 4 (lower is better)
Translates to: LSRLFRGRACVWEPSPAMHPVAV*GDLAHR
Trigger: CCTATGAGCAAGATCCCCGCAGACCGCTACAGGGTG...CATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTAAGATCTGCAGCTGCTaGTCCTTGAACATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPKICSC*SLNMSG
Trigger: CCCAGACATGTTCAAGGAGCAGCAGCTGCAGATCTT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCATGAGATTGAAGATCTaGAGCTGCTGCTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSMRLKI*SCCSLN
Trigger: GTTCAAGGAGCAGCAGCTGCAGATCTTCAATCTCAT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp TTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGGACCAGGTAGCCCCTCCCATGAGGCCTCCATTGGCATaGAGGGCGTCGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: FLIQACPGCERDQVAPPMRPPLA*RASSAW
Trigger: CCACGCAGACGACGCCCTGCATGCCAATGGAGGCCT...CATGGGAGGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCCTGGATGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp TCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTCCATCCGGGAGATGAATaGAGCAGTGCTTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SPPAANHSRGVHAPLSTLHPGDE*SSAWWP
Trigger: AGGCCACCAAGCACTGCTGCATTCATCTCCCGGATG...GAGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp TTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGGACCAGGTAGCCCCTCCCATGGCCCCGTTGATGCCATaGCGCTCACAGAGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: FLIQACPGCERDQVAPPMAPLMP*RSQSPD
Trigger: GTCCGGACTCTGTGAGCGGCATGGCATCAACGGGGC...CATGGGAGGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCCTGGATGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCCCTTGACTCCAAGATaGTACTGTCTTGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPPLTPR*YCLGAA
Trigger: TGCTGCACCAAGACAGTAGCATCTTGGAGTCAAGGG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCTGTTTATCTGCGGATaGCTTTCCTCTGGAAGGATC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGLFICG*LSSGRI
Trigger: GATCCTTCCAGAGGAAAGGCATCCGCAGATAAACAG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCTGTTTATCTGCGGATaGCTTTCCTCTGGAAGGATC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARLFICG*LSSGRI
Trigger: GATCCTTCCAGAGGAAAGGCATCCGCAGATAAACAG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGACCTTTCTGTTTATCTaGGGATGCCTTTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPATFLFI*GCLSSG
Trigger: TCCAGAGGAAAGGCATCCGCAGATAAACAGAAAGGT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCACCTTTCTGTTTATCTaGGGATGCCTTTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSTFLFI*GCLSSG
Trigger: TCCAGAGGAAAGGCATCCGCAGATAAACAGAAAGGT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp TGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACTTCCTCACTCCGCTCTCCCGGCCGTTaGCTGTGGCGCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: CVWEPSPAMNTAGFTSSLRSPGR*LWRFSC
Trigger: GCAAGAGAAGCGCCACAGGCAACGGCCGGGAGAGCG...GAGTGAGGAAGTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp TTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGGACCAGGTAGCCCCTCCCATGGTCAGCTCGGCCACGTaGTCATCCTCCACCGTCTGG +
Preference number: 4 (lower is better)
Translates to: FLIQACPGCERDQVAPPMVSSAT*SSSTVW
Trigger: CCAGACGGTGGAGGATGAGCACGTGGCCGAGCTGAC...CATGGGAGGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCCTGGATGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGACACAGTTGCAGACTaGTGGTCATTAGAAACATGG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSDTVAD*WSLETW
Trigger: CCATGTTTCTAATGACCAGCAGTCTGCAACTGTGTC...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGCCATCAGACACAGTTaGAGACTGCTGGTCATTAGA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGAIRHS*RLLVIR
Trigger: TCTAATGACCAGCAGTCTGCAACTGTGTCTGATGGC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTGCTTCTTCAAACAGTaGCCTTGTTCCCCACACAAG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPCFFKQ*PCSPHK
Trigger: CTTGTGTGGGGAACAAGGGCACTGTTTGAAGAAGCA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCACTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCAGGATGCCTGCGTGCTGTTGTTCTGGTaGGCATCGGCGTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: GTATYHSCKSLSGHQDACVLLFW*ASASPS
Trigger: GGACGGGGACGCCGATGCCCACCAGAACAACAGCAC...GCAGGCATCCTGGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AATGCCCGTGACACCCGCGGTCAGAGAGCGCTGCTGACGTCACCTCCACTCCCGTTGCTCTTCTCCTCCTaGTGGAAGTTCCCAATGCCG +
Preference number: 4 (lower is better)
Translates to: NARDTRGQRALLTSPPLPLLFSS*WKFPMP
Trigger: CGGCATTGGGAACTTCCACCAGGAGGAGAAGAGCAA...CGGGAGTGGAGGTGACGTCAGCAGCGCTCTCTGACCGCGGGTGTCACGGGCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCTTGGCGTGGACACACTaGAGTGGTCTGAACCGAGGC +
Preference number: 4 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPLAWTH*SGLNRG
Trigger: GCCTCGGTTCAGACCACTCCAGTGTGTCCACGCCAA...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp CTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGTGCTCCCTCTTTTTCTaGGACCTCCCGGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSRLFRGRACVWEPSPAMCSLFF*DLPVLL
Trigger: CAGGAGCACCGGGAGGTCCCAGAAAAAGAGGGAGCA...CATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp ACCTCGCTGCAGGCACTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCAGGGCGTCGTCTGCGTaGTCCCCGTGCTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TSLQALPRIIPARASQDTRASSA*SPCSLF
Trigger: AAAGAGGGAGCACGGGGACCACGCAGACGACGCCCT...GGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTAAGATGCTACTGTCTTaGTGCAGCACCAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPKMLLS*CSTRGL
Trigger: CAAGCCTCTGGTGCTGCACCAAGACAGTAGCATCTT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTCTCCCGTAGCCGAGTaGTTTCTGGAGCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPSPVAE*FLELEF
Trigger: AAATTCCAGCTCCAGAAACCACTCGGCTACGGGAGA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGTGGAGGCTGCAGAGTGGCACCGGTGGGCATGCCAGGCACCTCAGGCTTTCTCTTAGCAGCCCACGTTaGTCATCTGCTCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GWRLQSGTGGHARHLRLSLSSPR*SSALLL
Trigger: GAGCAACAGAGCAGATGACCAACGTGGGCTGCTAAG...AGAAAGCCTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGCTCCCATGCCACACGTaGCCTCCAAAGGCCCAGATA +
Preference number: 4 (lower is better)
Translates to: LSRLFRGRACVWEPSPAMLPCHT*PPKAQI
Trigger: TATCTGGGCCTTTGGAGGCCACGTGTGGCATGGGAG...CATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp ACACCACCTGCTACGGGGGCCGCCGGTGGGTCCGAGCTGCACTCTCAAGGCTCTCAATTTCAAGGGCTCTaGATTGCTCGCACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: TPPATGAAGGSELHSQGSQFQGL*IARTKA
Trigger: AGCCTTTGTGCGAGCAATTCAGAGCCCTTGAAATTG...AGAGCCTTGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTAGTTGCGGCCGACTCTaGAAGGGATCTTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPSCGRL*KGSLFQ
Trigger: TTGAAACAAAGATCCCTTTCAGAGTCGGCCGCAACT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCCTTGGTGGATCTTGTaGTTAAACAAGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPPWWIL*LNKSGS
Trigger: GGACCCAGACTTGTTTAATCACAAGATCCACCAAGG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp TTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGGACCAGGTAGCCCCTCCCATGGGTACAGGACAGAGATaGACTGCAGGACGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: FLIQACPGCERDQVAPPMGTGQR*TAGRGG
Trigger: CCCTCCCCGTCCTGCAGTTCATCTCTGTCCTGTACC...CATGGGAGGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCCTGGATGAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTCTGCTCTGTTGCTCTaGGCTTTGGAAATAAGCTCA +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSESALLL*ALEISS
Trigger: TGAGCTTATTTCCAAAGCTCAGAGCAACAGAGCAGA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTCTGCTCTGTTGCTCTaGGCTTTGGAAATAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSALLL*ALEISS
Trigger: TGAGCTTATTTCCAAAGCTCAGAGCAACAGAGCAGA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp CCACCAGCAAACAGTGGCAGCCGGGGGCCCACTGTCCTTTCTGACTGGAAGCTGTTTCTGACTGGAAGCTaGGCAGACCACGCTTACGGG +
Preference number: 4 (lower is better)
Translates to: PPANSGSRGPTVLSDWKLFLTGS*ADHAYG
Trigger: CCCGTAAGCGTGGTCTGCTCAGCTTCCAGTCAGAAA...CAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCGGCTGCCACTGTTTGCTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp ATCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTAGCCCTCTCCTGCTATaGACACAGCGGGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: IAPSSKPQQRCPRTPEHTSPLLL*TQRASL
Trigger: AAGTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCT...AGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CGGCGAGGTCCAGGCTACAGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCGACTCAAAACGCAGGTaGGAGCCACACAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RRGPGYRSDKTKPHGRPLDSKRR*EPHRCP
Trigger: TGGACACCTGTGTGGCTCTCACCTGCGTTTTGAGTC...GAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGACCTCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGCAGCCGCGGATGGCTTaGAAGCTGTCGGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: RSDKTKPHGRPLTAVSILQPRMA*KLSDSR
Trigger: CCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTG...CAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGGACCAAAAATGCTTTaGATTCCAAAGGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPGPKML*IPKAFL
Trigger: CAGGAAGGCCTTTGGAATGCAAAGCATTTTTGGTCC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGGACCAAAAATGCTTTaGATTCCAAAGGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGGPKML*IPKAFL
Trigger: CAGGAAGGCCTTTGGAATGCAAAGCATTTTTGGTCC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTGGACCAAAAATGCTTTaGATTCCAAAGGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAAGPKML*IPKAFL
Trigger: CAGGAAGGCCTTTGGAATGCAAAGCATTTTTGGTCC...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGATGAGATTGAAGATCTaGAGCTGCTGCTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEMRLKI*SCCSLN
Trigger: GTTCAAGGAGCAGCAGCTGCAGATCTTCAATCTCAT...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp CTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGGACCTCTGAACCGAGGCTGTaGTTGGAAGCCGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LTRPNLTAGLSLLSASWTSEPRL*LEAGLL
Trigger: CAGCAGCCCGGCTTCCAAGCACAGCCTCGGTTCAGA...GGTCCAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CCACCAGCAAACAGTGGCAGCCGGGGGCCCACTGTCCTTTCTGACTGGAAGCTGCCAGCCGAAACAAGGTaGGCTTTTCTAGGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: PPANSGSRGPTVLSDWKLPAETR*AFLGAG
Trigger: ACCTGCGCCTAGAAAAGCGCACCTTGTTTCGGCTGG...CAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCGGCTGCCACTGTTTGCTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGACCTTTCTGTTTATCTaGGGATGCCTTTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSETFLFI*GCLSSG
Trigger: TCCAGAGGAAAGGCATCCGCAGATAAACAGAAAGGT...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp GGCACTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCAGGATGCCTGCCGGCAGGCCTCTCACTaGTGTCAGCATCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: GTATYHSCKSLSGHQDACRQASH*CQHPGP
Trigger: TGGTCCAGGATGCTGACAGCAGTGAGAGGCCTGCCG...GCAGGCATCCTGGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAGTGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp TTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGGACCAGGTAGCCCCTCCCATGGCATGCAGCCGCGGATaGCTTGCAAGCTGTCGGACT +
Preference number: 4 (lower is better)
Translates to: FLIQACPGCERDQVAPPMACSRG*LASCRT
Trigger: AGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGC...CATGGGAGGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCCTGGATGAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGTGATTAAACAAGTCTaGGTCCACCATGAACACGTG +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGVIKQV*VHHEHV
Trigger: CACGTGTTCATGGTGGACCCAGACTTGTTTAATCAC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGGTGATTAAACAAGTCTaGGTCCACCATGAACACGTG +
Preference number: 4 (lower is better)
Translates to: LGTCCESGSARPSTSARMVIKQV*VHHEHV
Trigger: CACGTGTTCATGGTGGACCCAGACTTGTTTAATCAC...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp CTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGACAGCCATTGGTGTCTaGGTCGGCCGTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: LSRLFRGRACVWEPSPAMTAIGV*VGRALK
Trigger: TTTGAGTGCACGGCCGACCCAGACACCAATGGCTGT...CATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCACAGCCATTGGTGTCTaGGTCGGCCGTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPTAIGV*VGRALK
Trigger: TTTGAGTGCACGGCCGACCCAGACACCAATGGCTGT...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp TTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGGACCAGGTAGCCCCTCCCATGACCTCCCGGTGCTCCTaGTCCGCGACCACGAGAAAA +
Preference number: 4 (lower is better)
Translates to: FLIQACPGCERDQVAPPMTSRCS*SATTRK
Trigger: TTTTCTCGTGGTCGCGGACCAGGAGCACCGGGAGGT...CATGGGAGGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCCTGGATGAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTGGTTTCTGGAGCTaGAATTTACAGCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPASGFWS*NLQLCS
Trigger: AGAACACAGCTGTAAATTCCAGCTCCAGAAACCACT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GGGTGGAGGCTGCAGAGTGGCACCGGTGGGCATGCCAGGCACCTCAGGCTTTCTCCTTGGTGGATCTTGTaGTTAAACAAGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GWRLQSGTGGHARHLRLSPWWIL*LNKSGS
Trigger: GGACCCAGACTTGTTTAATCACAAGATCCACCAAGG...AGAAAGCCTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp GGCACTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCAGGATGCCTGCTCAGGCTGTTGTTGCTaGCGCAGTCCTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: GTATYHSCKSLSGHQDACSGCCC*RSPSGR
Trigger: CCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGA...GCAGGCATCCTGGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAGTGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTCATGTGCAGGAACATaGTTAAAATATTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPASCAGT*LKYSQA
Trigger: GGCCTGTGAATATTTTAATCATGTTCCTGCACATGA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTCATGTGCAGGAACATaGTTAAAATATTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSSCAGT*LKYSQA
Trigger: GGCCTGTGAATATTTTAATCATGTTCCTGCACATGA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR TCA 90 bp TGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACTTCCTCACTCAAGACATCACCAGCAGGCCACTaGGGTCCAGGCCGTATCTGG +
Preference number: 4 (lower is better)
Translates to: WEPSPAMNTAGFTSSLKTSPAGH*GPGRIW
Trigger: CCAGATACGGCCTGGACCTCAGTGGCCTGCTGGTGA...TGTCTTGAGTGAGGAAGTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CAGGGTGTTCCCAGACCTCGCTGCAGGCACTGCCACGTATCATTCCTGCAAGAGTTTGAGAAATGCCCGTaGCACCCGCGGTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: QGVPRPRCRHCHVSFLQEFEKCP*HPRSES
Trigger: GCTCTCTGACCGCGGGTGTCACGGGCATTTCTCAAA...CTCTTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGGTCTGGGAACACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CGGGGGCCCACTGTCCTTTCTGACTGGAAGCTGAGCAGACCACGCTTACGGGGCTTGTCAGTGCTCAGCTaGACACAGTCGTGCATGATC +
Preference number: 4 (lower is better)
Translates to: RGPTVLSDWKLSRPRLRGLSVLS*TQSCMI
Trigger: GATCATGCACGACTGTGTGCAGCTGAGCACTGACAA...GCCCCGTAAGCGTGGTCTGCTCAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp ATCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTCACTGTTGCTGCTGGTaGTGTTGTTCTGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: IAPSSKPQQRCPRTPEHTHCCCW*CCSGGH
Trigger: ATGCCCACCAGAACAACAGCACCAGCAGCAACAGTG...AGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCCACTGTTGCTGCTGGTaGTGTTGTTCTGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPHCCCW*CCSGGH
Trigger: ATGCCCACCAGAACAACAGCACCAGCAGCAACAGTG...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCCGCTGTCACTGTTGCTaGTGGTGCTGTTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPRCHCC*WCCCSG
Trigger: ACCAGAACAACAGCACCAGCAGCAACAGTGACAGCG...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp AACCAGCAGGTGAGGAGGGGGTCACGGAGACCACCAGCAAACAGTGGCAGCCGGAAGATCTGCAGCTGCTaGTCCTTGAACATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: NQQVRRGSRRPPANSGSRKICSC*SLNMSG
Trigger: CCCAGACATGTTCAAGGAGCAGCAGCTGCAGATCTT...CCGGCTGCCACTGTTTGCTGGTGGTCTCCGTGACCCCCTCCTCACCTGCTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp TTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGGACCAGGTAGCCCCTCCCATGCTTGTCCTTCTCGGGTaGCAAAGTCCTGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: FLIQACPGCERDQVAPPMLVLLG*QSPAGL
Trigger: GAGGCCTGCAGGACTTTGGCACCCGAGAAGGACAAG...CATGGGAGGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCCTGGATGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACGCCACGTATCATTCCTaGAAGAGCCTCTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: RTGLCLGALSCYEHSGLHATYHS*KSLSGH
Trigger: GTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGC...GTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGGACCCGGAAACATCCCTGCTaGCAGGCCATCCTGTTCACC +
Preference number: 4 (lower is better)
Translates to: LTRPNLTAGLSLLSASWTRKHPC*QAILFT
Trigger: GGTGAACAGGATGGCCTGGCAGCAGGGATGTTTCCG...GGTCCAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGTCTCATTGTTCCCTTaGAGCCATATTTCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPVSLFP*SHISRN
Trigger: ATTCCTTGAAATATGGCTCCAAGGGAACAATGAGAC...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp AGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGTCCACCATGAACACGTaGCAGGAAGTCCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RSDKTKPHGRPLTAVSILSTMNT*QEVRRA
Trigger: CGCCCTGCGGACTTCCTGCCACGTGTTCATGGTGGA...CAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGTGATTAAACAAGTCTaGGTCCACCATGAACACGTG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPVIKQV*VHHEHV
Trigger: CACGTGTTCATGGTGGACCCAGACTTGTTTAATCAC...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCTTGCTCTTCTCCTCCTaGTGGAAGTTCCCAATGCCG +
Preference number: 4 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPLLFSS*WKFPMP
Trigger: CGGCATTGGGAACTTCCACCAGGAGGAGAAGAGCAA...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp CTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGGACCAAGAGTCCTGGTCGCTaGTGTGTCCGCACTGCCACT +
Preference number: 4 (lower is better)
Translates to: LTRPNLTAGLSLLSASWTKSPGR*CVRTAT
Trigger: AGTGGCAGTGCGGACACACCAGCGACCAGGACTCTT...GGTCCAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTTTCGAACATTTCGATaGGGACCAAAAATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSFRTFR*GPKMLC
Trigger: GCAAAGCATTTTTGGTCCCCATCGAAATGTTCGAAA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp ACCTCGCTGCAGGCACTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCTTGGCGTGGACACACTaGAGTGGTCTGAACCGAGGC +
Preference number: 4 (lower is better)
Translates to: TSLQALPRIIPARASQDTLAWTH*SGLNRG
Trigger: GCCTCGGTTCAGACCACTCCAGTGTGTCCACGCCAA...GGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTAGTGGTTTCTGGAGCTaGAATTTACAGCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSGFWS*NLQLCS
Trigger: AGAACACAGCTGTAAATTCCAGCTCCAGAAACCACT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGAGTGGTTTCTGGAGCTaGAATTTACAGCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSESGFWS*NLQLCS
Trigger: AGAACACAGCTGTAAATTCCAGCTCCAGAAACCACT...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CACCTGCTACGGGGGCCGCCGGTGGGTCCGAGCTGCACTCTCAAGGCTCTTCCGAGTGGTTTCTGGAGCTaGAATTTACAGCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: HLLRGPPVGPSCTLKALPSGFWS*NLQLCS
Trigger: AGAACACAGCTGTAAATTCCAGCTCCAGAAACCACT...CGGAAGAGCCTTGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTACAGTTGCAGACTGCTaGTCATTAGAAACATGGGTT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPTVADC*SLETWV
Trigger: AACCCATGTTTCTAATGACCAGCAGTCTGCAACTGT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS-3UTR CCA 90 bp GGTAGCCCCTCCCATGCCACACGTGGCCTCCAAAGGCCCAGATATGTACAGATCGAACCTGGAGGTACCTaGTCTGGAAGGTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GSPSHATRGLQRPRYVQIEPGGT*SGRSWH
Trigger: GTGCCAGGACCTTCCAGACCAGGTACCTCCAGGTTC...GATCTGTACATATCTGGGCCTTTGGAGGCCACGTGTGGCATGGGAGGGGCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACACTGTCCTTTCTGACTaGAAGCTGAGCAGACCACGC +
Preference number: 4 (lower is better)
Translates to: RTGLCLGALSCYEHSGLHTVLSD*KLSRPR
Trigger: GCGTGGTCTGCTCAGCTTCCAGTCAGAAAGGACAGT...GTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AACCAGCAGGTGAGGAGGGGGTCACGGAGACCACCAGCAAACAGTGGCAGCCGGCCTCGCCTCAGTTTCTaGTATTTGTGGCTCACGGAA +
Preference number: 4 (lower is better)
Translates to: NQQVRRGSRRPPANSGSRPRLSF*YLWLTE
Trigger: TTCCGTGAGCCACAAATACCAGAAACTGAGGCGAGG...CCGGCTGCCACTGTTTGCTGGTGGTCTCCGTGACCCCCTCCTCACCTGCTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTTTCTAGTCCAATGCTaGAAACCGAATCATCATGAA +
Preference number: 4 (lower is better)
Translates to: AREPHGQHGECPGPVPPAFLVQC*KPNHHE
Trigger: TTCATGATGATTCGGTTTTCAGCATTGGACTAGAAA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTAATGCAAAATCGTCATaGCTTTCTAGTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPNAKSS*LSSPML
Trigger: CAGCATTGGACTAGAAAGTCATGACGATTTTGCATT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGAATGCAAAATCGTCATaGCTTTCTAGTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARNAKSS*LSSPML
Trigger: CAGCATTGGACTAGAAAGTCATGACGATTTTGCATT...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp CAGGGTGTTCCCAGACCTCGCTGCAGGCACTGCCACGTATCATTCCTGCAAGAGGCACACAGTCGTGCATaGTCTTCATGGTCACCAGCG +
Preference number: 4 (lower is better)
Translates to: QGVPRPRCRHCHVSFLQEAHSRA*SSWSPA
Trigger: CGCTGGTGACCATGAAGATCATGCACGACTGTGTGC...CTCTTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGGTCTGGGAACACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCATGTGCAGGAACATaGTTAAAATATTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARSCAGT*LKYSQA
Trigger: GGCCTGTGAATATTTTAATCATGTTCCTGCACATGA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACCCGTCGTCATTCGTCTaGATGGTAACCAACCCGAAA +
Preference number: 4 (lower is better)
Translates to: RTGLCLGALSCYEHSGLHPSSFV*MVTNPK
Trigger: TTTCGGGTTGGTTACCATGCAGACGAATGACGACGG...GTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGGACCGAGGCTGGCCCTAGGTaGTTGTTTAGGTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LTRPNLTAGLSLLSASWTEAGPR*LFRSQN
Trigger: GTTCTGGGACCTAAACAAGCACCTAGGGCCAGCCTC...GGTCCAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCACGGACACAGAACATaGGTACTTAGTAAAATTATG +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSHGHRT*VLSKIM
Trigger: CATAATTTTACTAAGTACGCATGTTCTGTGTCCGTG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGTCTCATTGTTCCCTTaGAGCCATATTTCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPVSLFP*SHISRN
Trigger: ATTCCTTGAAATATGGCTCCAAGGGAACAATGAGAC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGTCTCATTGTTCCCTTaGAGCCATATTTCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGVSLFP*SHISRN
Trigger: ATTCCTTGAAATATGGCTCCAAGGGAACAATGAGAC...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CCA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTGTGTTCTGTTTCACTaGCACACCTTTCTGTTTATC +
Preference number: 4 (lower is better)
Translates to: PAWRMSGASASSEVTPCPCVLFH*HTFLFI
Trigger: GATAAACAGAAAGGTGTGCCAGTGAAACAGAACACA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTGTGTTCTGTTTCACTaGCACACCTTTCTGTTTATC +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSECVLFH*HTFLFI
Trigger: GATAAACAGAAAGGTGTGCCAGTGAAACAGAACACA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTGTGTTCTGTTTCACTaGCACACCTTTCTGTTTATC +
Preference number: 4 (lower is better)
Translates to: GSPMASMANVRGQCLQRGCVLFH*HTFLFI
Trigger: GATAAACAGAAAGGTGTGCCAGTGAAACAGAACACA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTGGTCATTAGAAACATaGGTTTCGTTTGACAACTCT +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSWSLET*VSFDNS
Trigger: AGAGTTGTCAAACGAAACCCATGTTTCTAATGACCA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS-3UTR CCA 90 bp TGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACTTCCTCACTCAAGACATTCCCTACCGGCTGCTaGGAGCCTCGCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: WEPSPAMNTAGFTSSLKTFPTGC*EPRLSF
Trigger: GAAACTGAGGCGAGGCTCCCAGCAGCCGGTAGGGAA...TGTCTTGAGTGAGGAAGTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
3UTR CAA 72 bp AGGACGTCGTCTGCTAGCTGGGCCTGGCTGTCGATGTaGACCGGGGTGGTGGCTTTGCTGCAGAGAAACTTA +
Preference number: 4 (lower is better)
Translates to: RTSSASWAWLSM*TGVVALLQRNL
Trigger: TAAGTTTCTCTGCAGCAAAGCCACCACCCCGGTCAACATCGACAGCCAGGCCCAGCTAGCAGACGACGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCAGTTGCGGCCGACTCTaGAAGGGATCTTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPSCGRL*KGSLFQ
Trigger: TTGAAACAAAGATCCCTTTCAGAGTCGGCCGCAACT...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTTCTAGTCCAATGCTaGAAACCGAATCATCATGAA +
Preference number: 4 (lower is better)
Translates to: REPHGQHGECPGPVPPARFLVQC*KPNHHE
Trigger: TTCATGATGATTCGGTTTTCAGCATTGGACTAGAAA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR TCA 90 bp GCACACTCCATGACGCGCACCCTGAGCGGCTCCTCTCTCCAGGGGATGGCCACGTCATGTGCAGGAACATaGTTAAAATATTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: AHSMTRTLSGSSLQGMATSCAGT*LKYSQA
Trigger: GGCCTGTGAATATTTTAATCATGTTCCTGCACATGA...CGTGGCCATCCCCTGGAGAGAGGAGCCGCTCAGGGTGCGCGTCATGGAGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTAACATGGGTTTCGTTTaGCAACTCTTTCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPNMGFV*QLFPQI
Trigger: AATTTGGGGAAAGAGTTGTCAAACGAAACCCATGTT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS-3UTR GCA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCCATATTTCAAGGAATaGTTGATGCTACCATGTTTG +
Preference number: 4 (lower is better)
Translates to: QGAPWPAWRMSGASASSEPYFKE*LMLPCL
Trigger: CAAACATGGTAGCATCAAGCATTCCTTGAAATATGG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGCCATATTTCAAGGAATaGTTGATGCTACCATGTTTG +
Preference number: 4 (lower is better)
Translates to: LGTCCESGSARPSTSARMPYFKE*LMLPCL
Trigger: CAAACATGGTAGCATCAAGCATTCCTTGAAATATGG...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCAATACTTGCATCCAATaGAAAATCGTCATGACTTTC +
Preference number: 4 (lower is better)
Translates to: GQGAPWPAWRMSGASASSNTCIQ*KIVMTF
Trigger: GAAAGTCATGACGATTTTGCATTGGATGCAAGTATT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGCCTCGCTGCAGGCACTaGCACGTATCATTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: RSDKTKPHGRPLTAVSILPRCRH*HVSFLQ
Trigger: TTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGG...CAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp TGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACTTCCTCACTCTTGACAGCAAGTATCTaGTCTCCAGCTCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CVWEPSPAMNTAGFTSSLLTASI*SPARRP
Trigger: GGGCCTCCGAGCTGGAGACCAGATACTTGCTGTCAA...GAGTGAGGAAGTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGATGGTCACCAGCGAGTaGATTTTCTGCTCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: RSDKTKPHGRPLTAVSILMVTSE*IFCSAR
Trigger: GCGGGCAGAGCAGAAAATCCACTCGCTGGTGACCAT...CAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCTTTCGAACATTTCGATaGGGACCAAAAATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSFRTFR*GPKMLC
Trigger: GCAAAGCATTTTTGGTCCCCATCGAAATGTTCGAAA...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp TGTTCACCTTCACACTCACTGAATCCCCTGCTTCCTTTGAGAAATGCCCGTGACTGGAGAAGCCCGCCTTaGCAGCCACCACGCAGGATG +
Preference number: 4 (lower is better)
Translates to: CSPSHSLNPLLPLRNARDWRSPP*QPPRRM
Trigger: CATCCTGCGTGGTGGCTGTCAAGGCGGGCTTCTCCA...GTCACGGGCATTTCTCAAAGGAAGCAGGGGATTCAGTGAGTGTGAAGGTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCCATATTTCAAGGAATaGTTGATGCTACCATGTTTG +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPPYFKE*LMLPCL
Trigger: CAAACATGGTAGCATCAAGCATTCCTTGAAATATGG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGCGCTGTCACTGTTGCTaGTGGTGCTGTTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RSDKTKPHGRPLTAVSILRCHCC*WCCCSG
Trigger: ACCAGAACAACAGCACCAGCAGCAACAGTGACAGCG...CAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCATGAGATTGAAGATCTaGAGCTGCTGCTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPMRLKI*SCCSLN
Trigger: GTTCAAGGAGCAGCAGCTGCAGATCTTCAATCTCAT...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR GCA 90 bp TGTTCACCTTCACACTCACTGAATCCCCTGCTTCCTTTGAGAAATGCCCGTGACGAGGACACAGAGCCCTaGGACTCTCGGCGACACAGG +
Preference number: 4 (lower is better)
Translates to: CSPSHSLNPLLPLRNARDEDTEP*DSRRHR
Trigger: CCTGTGTCGCCGAGAGTCGCAGGGCTCTGTGTCCTC...GTCACGGGCATTTCTCAAAGGAAGCAGGGGATTCAGTGAGTGTGAAGGTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CGGCGAGGTCCAGGCTACAGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACCTTTCTGTTTATCTaGGGATGCCTTTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RRGPGYRSDKTKPHGRPLTFLFI*GCLSSG
Trigger: TCCAGAGGAAAGGCATCCGCAGATAAACAGAAAGGT...GAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGACCTCGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GCCTCTCACTGCTGTCAGCATCCTGGACCAGGGCACAGGACGGAGAGGCGCTCCGTCTCATTGTTCCCTTaGAGCCATATTTCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: ASHCCQHPGPGHRTERRSVSLFP*SHISRN
Trigger: ATTCCTTGAAATATGGCTCCAAGGGAACAATGAGAC...GGAGCGCCTCTCCGTCCTGTGCCCTGGTCCAGGATGCTGACAGCAGTGAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CAGGGTGTTCCCAGACCTCGCTGCAGGCACTGCCACGTATCATTCCTGCAAGAGTGGACCAGCCATCGGTaGAATCTGTGTAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: QGVPRPRCRHCHVSFLQEWTSHR*NLCKSP
Trigger: AGGACTCTTACACAGATTCCACCGATGGCTGGTCCA...CTCTTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGGTCTGGGAACACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp TGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACTTCCTCACTCAAGACAGCCAGGATGCATTCCTaGTACAGCGGGGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: WEPSPAMNTAGFTSSLKTARMHS*YSGDFR
Trigger: TCTGAAGTCCCCGCTGTACCAGGAATGCATCCTGGC...TGTCTTGAGTGAGGAAGTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp TTATTACTCCTGGAAGAACAGACTCAAAACGCAGGTGAGAGCCACACAGGTGTCGCAGTGTGCCGCAGTTaGTGCTGGACCAGCCATCGG +
Preference number: 4 (lower is better)
Translates to: LLLLEEQTQNAGESHTGVAVCRS*CWTSHR
Trigger: CCGATGGCTGGTCCAGCATCAACTGCGGCACACTGC...GACACCTGTGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTAATACTTGCATCCAATaGAAAATCGTCATGACTTTC +
Preference number: 4 (lower is better)
Translates to: HGQHGECPGPVPPARSPPNTCIQ*KIVMTF
Trigger: GAAAGTCATGACGATTTTGCATTGGATGCAAGTATT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR GCA 90 bp AGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGAGCTGCACACAGTCGTaGATGATCTTCATGGTCACC +
Preference number: 4 (lower is better)
Translates to: RSDKTKPHGRPLTAVSILSCTQS*MIFMVT
Trigger: GGTGACCATGAAGATCATGCACGACTGTGTGCAGCT...CAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGCAAACCGCCGAGCAATaGCTTGGTGGATCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: RSDKTKPHGRPLTAVSILQTAEQ*LGGSCD
Trigger: ATCACAAGATCCACCAAGGCATTGCTCGGCGGTTTG...CAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCCTCCATTTTCGGAAACCCCCTGGTGTGTCCGCACTaGCACTCCCGGAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: KNDRCPDLERNASIFGNPLVCPH*HSRSTW
Trigger: CCACGTGCTCCGGGAGTGGCAGTGCGGACACACCAG...GGGGTTTCCGAAAATGGAGGCATTCCTTTCCAAATCTGGACAGCGATCGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp TGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACTTCCTCACTCTGGAAGGAAGCTCAATaGAGCCTAAGTAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: CVWEPSPAMNTAGFTSSLWKEAQ*SLSSPR
Trigger: TCGTGGGCTACTTAGGCTCCATTGAGCTTCCTTCCA...GAGTGAGGAAGTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp TGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACTTCCTCACTCAAGACATGTCACTGTTGCTGCTaGTGCTGTTGTTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: WEPSPAMNTAGFTSSLKTCHCCC*CCCSGG
Trigger: CCCACCAGAACAACAGCACCAGCAGCAACAGTGACA...TGTCTTGAGTGAGGAAGTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp TATTACTCCTGGAAGAACAGACTCAAAACGCAGGTGAGAGCCACACAGGTGTCCGCTCCTCAAGGAAGCTaGGGGCACCTCCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: YYSWKNRLKTQVRATQVSAPQGS*GHLHRR
Trigger: TCTCCTGTGGAGGTGCCCCCAGCTTCCTTGAGGAGC...GGACACCTGTGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CGGGGGCCCACTGTCCTTTCTGACTGGAAGCTGAGCAGACCACGCTTACGGGGCTTTCGAACATTTCGATaGGGACCAAAAATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: RGPTVLSDWKLSRPRLRGFRTFR*GPKMLC
Trigger: GCAAAGCATTTTTGGTCCCCATCGAAATGTTCGAAA...GCCCCGTAAGCGTGGTCTGCTCAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGAAGATGCTACTGTCTTaGTGCAGCACCAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: RSDKTKPHGRPLTAVSILKMLLS*CSTRGL
Trigger: CAAGCCTCTGGTGCTGCACCAAGACAGTAGCATCTT...CAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp TATTACTCCTGGAAGAACAGACTCAAAACGCAGGTGAGAGCCACACAGGTGTCCCTTGGCCACAGCAGCTaGAGTGGGGAGGGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: YYSWKNRLKTQVRATQVSLGHSS*SGEGEF
Trigger: GAACTCACCCTCCCCACTCCAGCTGCTGTGGCCAAG...GGACACCTGTGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp AACCAGCAGGTGAGGAGGGGGTCACGGAGACCACCAGCAAACAGTGGCAGCCGGTTTCTAGTCCAATGCTaGAAACCGAATCATCATGAA +
Preference number: 4 (lower is better)
Translates to: NQQVRRGSRRPPANSGSRFLVQC*KPNHHE
Trigger: TTCATGATGATTCGGTTTTCAGCATTGGACTAGAAA...CCGGCTGCCACTGTTTGCTGGTGGTCTCCGTGACCCCCTCCTCACCTGCTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCAATGCAAAATCGTCATaGCTTTCTAGTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPNAKSS*LSSPML
Trigger: CAGCATTGGACTAGAAAGTCATGACGATTTTGCATT...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp TATTACTCCTGGAAGAACAGACTCAAAACGCAGGTGAGAGCCACACAGGTGTCCGTTGAGAAGGCTGAGTaGGTCCAGTTCCCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: YYSWKNRLKTQVRATQVSVEKAE*VQFPAQ
Trigger: TTGGGCGGGGAACTGGACTCACTCAGCCTTCTCAAC...GGACACCTGTGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp ACCTCGCTGCAGGCACTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCTCTGCTCTGTTGCTCTaGGCTTTGGAAATAAGCTCA +
Preference number: 4 (lower is better)
Translates to: TSLQALPRIIPARASQDTSALLL*ALEISS
Trigger: TGAGCTTATTTCCAAAGCTCAGAGCAACAGAGCAGA...GGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp TATTACTCCTGGAAGAACAGACTCAAAACGCAGGTGAGAGCCACACAGGTGTCCAGGACAGAGATGAACTaGAGGACGGGGAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: YYSWKNRLKTQVRATQVSRTEMN*RTGRED
Trigger: GTCCTCCCTCCCCGTCCTGCAGTTCATCTCTGTCCT...GGACACCTGTGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp ATGCTATTGTTTTCCAGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGGCCAGGGGTGGAGGCTaGAGAGTGGCACCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: MLLFSSLETETLKTIAVQARGGG*RVAPVG
Trigger: GCCCACCGGTGCCACTCTGCAGCCTCCACCCCTGGC...CTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACTGGAAAACAATAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCAGGATGCCTGCCCAGGTGATTAAACAAGTCTaGGTCCACCATGAACACGTG +
Preference number: 4 (lower is better)
Translates to: LPRIIPARASQDTRMPAQVIKQV*VHHEHV
Trigger: CACGTGTTCATGGTGGACCCAGACTTGTTTAATCAC...CTGGGCAGGCATCCTGGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp TATTACTCCTGGAAGAACAGACTCAAAACGCAGGTGAGAGCCACACAGGTGTCCACGTCGTCTGCTAGCTaGGCCTGGCTGTCGATGTTG +
Preference number: 4 (lower is better)
Translates to: YYSWKNRLKTQVRATQVSTSSAS*AWLSML
Trigger: CAACATCGACAGCCAGGCCCAGCTAGCAGACGACGT...GGACACCTGTGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp CAGGGTGTTCCCAGACCTCGCTGCAGGCACTGCCACGTATCATTCCTGCAAGAGAGTTTCTGGTATTTGTaGCTCACGGAAACATCCCTG +
Preference number: 4 (lower is better)
Translates to: QGVPRPRCRHCHVSFLQESFWYL*LTETSL
Trigger: CAGGGATGTTTCCGTGAGCCACAAATACCAGAAACT...CTCTTGCAGGAATGATACGTGGCAGTGCCTGCAGCGAGGTCTGGGAACACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCTTTCTAGTCCAATGCTaGAAACCGAATCATCATGAA +
Preference number: 4 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPFLVQC*KPNHHE
Trigger: TTCATGATGATTCGGTTTTCAGCATTGGACTAGAAA...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR TCA 90 bp TGTTCACCTTCACACTCACTGAATCCCCTGCTTCCTTTGAGAAATGCCCGTGACGGCCTTGAGTCCCACTaGCCGGTTAATCGGAACAAG +
Preference number: 4 (lower is better)
Translates to: CSPSHSLNPLLPLRNARDGLESH*PVNRNK
Trigger: CTTGTTCCGATTAACCGGTCAGTGGGACTCAAGGCC...GTCACGGGCATTTCTCAAAGGAAGCAGGGGATTCAGTGAGTGTGAAGGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CCACCAGCAAACAGTGGCAGCCGGGGGCCCACTGTCCTTTCTGACTGGAAGCTGCCATATTTCAAGGAATaGTTGATGCTACCATGTTTG +
Preference number: 4 (lower is better)
Translates to: PPANSGSRGPTVLSDWKLPYFKE*LMLPCL
Trigger: CAAACATGGTAGCATCAAGCATTCCTTGAAATATGG...CAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCGGCTGCCACTGTTTGCTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp ATGCTATTGTTTTCCAGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGGCATTCAGCGGGGGCTaGGCGAAGCTGCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: MLLFSSLETETLKTIAVQAFSGG*AKLPST
Trigger: GGTGGAGGGCAGCTTCGCGCAGCCCCCGCTGAATGC...CTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACTGGAAAACAATAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCTGCGAGTCCGGGAGTaGACGGCCCTCCACTTCCGC +
Preference number: 4 (lower is better)
Translates to: SLETETLKTIAVQIWKGMLRVRE*TALHFR
Trigger: GCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAG...CATTCCTTTCCAAATCTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp GGCATGCCAGGCACCTCAGGCTTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGTGTGTTCTGTTTCACTaGCACACCTTTCTGTTTATC +
Preference number: 4 (lower is better)
Translates to: GMPGTSGFLIQACPGCERCVLFH*HTFLFI
Trigger: GATAAACAGAAAGGTGTGCCAGTGAAACAGAACACA...CCTTTCACAGCCAGGACACGCCTGGATGAGAAAGCCTGAGGTGCCTGGCATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp TTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGGACCAGGTAGCCCCTCCCATGATCGCTGTCCAGATTTaGAAAGGAATGCCTCCATTT +
Preference number: 4 (lower is better)
Translates to: FLIQACPGCERDQVAPPMIAVQI*KGMPPF
Trigger: AAATGGAGGCATTCCTTTCCAAATCTGGACAGCGAT...CATGGGAGGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCCTGGATGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp CTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCAGGATGCCTGCCCAGAATGCAAAATCGTCATaGCTTTCTAGTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: LPRIIPARASQDTRMPAQNAKSS*LSSPML
Trigger: CAGCATTGGACTAGAAAGTCATGACGATTTTGCATT...CTGGGCAGGCATCCTGGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGAATACTTGCATCCAATaGAAAATCGTCATGACTTTC +
Preference number: 4 (lower is better)
Translates to: LSRLFRGRACVWEPSPAMNTCIQ*KIVMTF
Trigger: GAAAGTCATGACGATTTTGCATTGGATGCAAGTATT...CATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCAATACTTGCATCCAATaGAAAATCGTCATGACTTTC +
Preference number: 4 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPNTCIQ*KIVMTF
Trigger: GAAAGTCATGACGATTTTGCATTGGATGCAAGTATT...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CCA 90 bp TTATTACTCCTGGAAGAACAGACTCAAAACGCAGGTGAGAGCCACACAGGTGTCCTCTTCTCCTCCTGGTaGAAGTTCCCAATGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LLLLEEQTQNAGESHTGVLFSSW*KFPMPL
Trigger: CAGCGGCATTGGGAACTTCCACCAGGAGGAGAAGAG...GACACCTGTGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCCTCCATTTTCGGAAACCCCCTTACGGGGCCAAGGTaGAGGGATCAGAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: KNDRCPDLERNASIFGNPLTGPR*RDQNLE
Trigger: CTCCAGGTTCTGATCCCTCCACCTTGGCCCCGTAAG...GGGGTTTCCGAAAATGGAGGCATTCCTTTCCAAATCTGGACAGCGATCGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCCTCCATTTTCGGAAACCCCTGGAGGTACCTGGTCTaGAAGGTCCTGGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: KNDRCPDLERNASIFGNPWRYLV*KVLALP
Trigger: AGGAAGTGCCAGGACCTTCCAGACCAGGTACCTCCA...GGGGTTTCCGAAAATGGAGGCATTCCTTTCCAAATCTGGACAGCGATCGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCCTCCATTTTCGGAAACCCCGGAGGGATCAGAACCTaGAGGTACCTGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KNDRCPDLERNASIFGNPGGIRT*RYLVWK
Trigger: CTTCCAGACCAGGTACCTCCAGGTTCTGATCCCTCC...GGGGTTTCCGAAAATGGAGGCATTCCTTTCCAAATCTGGACAGCGATCGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGATTTGGAAAGGAATGACCACCAGCAAACAGTaGCAGCCGGGGGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: SLETETLKTIAVQIWKGMTTSKQ*QPGAHC
Trigger: ACAGTGGGCCCCCGGCTGCCACTGTTTGCTGGTGGT...CATTCCTTTCCAAATCTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp TATTACTCCTGGAAGAACAGACTCAAAACGCAGGTGAGAGCCACACAGGTGTCCAAAATTCCACCAGACTaGATTTCCTCCACGACTCGC +
Preference number: 4 (lower is better)
Translates to: YYSWKNRLKTQVRATQVSKIPPD*ISSTTR
Trigger: GCGAGTCGTGGAGGAAATGCAGTCTGGTGGAATTTT...GGACACCTGTGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp ATGCTATTGTTTTCCAGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGTGTCTGGGTCGGCCGTaGACTCAAACCCAAACCGCC +
Preference number: 4 (lower is better)
Translates to: MLLFSSLETETLKTIAVQCLGRP*TQTQTA
Trigger: GGCGGTTTGGGTTTGAGTGCACGGCCGACCCAGACA...CTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACTGGAAAACAATAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCCTCCATTTTCGGAAACCCCATGCTACTGTCTTGGTaGAGCACCAGAGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: KNDRCPDLERNASIFGNPMLLSW*STRGLS
Trigger: GGACAAGCCTCTGGTGCTGCACCAAGACAGTAGCAT...GGGGTTTCCGAAAATGGAGGCATTCCTTTCCAAATCTGGACAGCGATCGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp AAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCCTCCATTTTCGGAAACCCCTGCAGAGAAACTTACTaGAAATCTCCCGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: KNDRCPDLERNASIFGNPCRETY*KSPGPC
Trigger: ACAGGGCCCGGGAGATTTTCAGTAAGTTTCTCTGCA...GGGGTTTCCGAAAATGGAGGCATTCCTTTCCAAATCTGGACAGCGATCGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp ATGCTATTGTTTTCCAGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGCACACTGGAGTGGTCTaGACCGAGGCTGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: MLLFSSLETETLKTIAVQHTGVV*TEAVLG
Trigger: TCCAAGCACAGCCTCGGTTCAGACCACTCCAGTGTG...CTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACTGGAAAACAATAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp TGTTCACCTTCACACTCACTGAATCCCCTGCTTCCTTTGAGAAATGCCCGTGACATGAGATTGAAGATCTaGAGCTGCTGCTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: CSPSHSLNPLLPLRNARDMRLKI*SCCSLN
Trigger: GTTCAAGGAGCAGCAGCTGCAGATCTTCAATCTCAT...GTCACGGGCATTTCTCAAAGGAAGCAGGGGATTCAGTGAGTGTGAAGGTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR TCA 90 bp AAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCCTCCATTTTCGGAAACCCCAGTTGCGGCCGACTCTaGAAGGGATCTTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: KNDRCPDLERNASIFGNPSCGRL*KGSLFQ
Trigger: TTGAAACAAAGATCCCTTTCAGAGTCGGCCGCAACT...GGGGTTTCCGAAAATGGAGGCATTCCTTTCCAAATCTGGACAGCGATCGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp AGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGATTTGGAAAGGAATGTCTCCCGTAGCCGAGTaGTTTCTGGAGCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: SLETETLKTIAVQIWKGMSPVAE*FLELEF
Trigger: AAATTCCAGCTCCAGAAACCACTCGGCTACGGGAGA...CATTCCTTTCCAAATCTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp ATGCTATTGTTTTCCAGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGCTGTTTATCTGCGGATaGCTTTCCTCTGGAAGGATC +
Preference number: 4 (lower is better)
Translates to: MLLFSSLETETLKTIAVQLFICG*LSSGRI
Trigger: GATCCTTCCAGAGGAAAGGCATCCGCAGATAAACAG...CTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACTGGAAAACAATAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGATTTGGAAAGGAATGGGACCAAAAATGCTTTaGATTCCAAAGGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLETETLKTIAVQIWKGMGPKML*IPKAFL
Trigger: CAGGAAGGCCTTTGGAATGCAAAGCATTTTTGGTCC...CATTCCTTTCCAAATCTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR GCA 90 bp AAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCCTCCATTTTCGGAAACCCCCTCACTCAAGACAAATaGTATTGTTTTCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: KNDRCPDLERNASIFGNPLTQDK*YCFPVL
Trigger: CAAGACTGGAAAACAATAGCATTTGTCTTGAGTGAG...GGGGTTTCCGAAAATGGAGGCATTCCTTTCCAAATCTGGACAGCGATCGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CCA 90 bp TTATTACTCCTGGAAGAACAGACTCAAAACGCAGGTGAGAGCCACACAGGTGTCAGAATTTATTACTCCTaGAAGAACAGACTCAAAACG +
Preference number: 4 (lower is better)
Translates to: LLLLEEQTQNAGESHTGVRIYYS*KNRLKT
Trigger: CGTTTTGAGTCTGTTCTTCCAGGAGTAATAAATTCT...GACACCTGTGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS GCA 90 bp GGGCTGGTGGACGGGCTGTCGCTGCTCTCCTGGACTGGCTCCCACTaGTCGCCAGGCTGGGAGGCGCTCTCCCGGCCGTTGCCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: GLVDGLSLLSWTGSH*SPGWEALSRPLPVA
Trigger: CGCCACAGGCAACGGCCGGGAGAGCGCCTCCCAGCCTGGCGAGCAGTGGGAGCCAGTCCAGGAGAGCAGCGACAGCCCGTCCACCAGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
CDS-3UTR CAA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCCACACTCCGCACCCTaGGGGGCGACGGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: GQGAPWPAWRMSGASASSPHSAP*GATAQA
Trigger: TGCCTGGGCCGTCGCCCCCAAGGGTGCGGAGTGTGG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS TCA 90 bp CGCCCGGGCCCCGTGCAACACTCACCAGCCTCACCAGCAGGCCACTaGGGTCCAGGCCGTATCTGGCCACCACGGGCCGCAGCACCTCCG +
Preference number: 5 (lower is better)
Translates to: RPGPVQHSPASPAGH*GPGRIWPPRAAAPP
Trigger: CGGAGGTGCTGCGGCCCGTGGTGGCCAGATACGGCCTGGACCTCAGTGGCCTGCTGGTGAGGCTGGTGAGTGTTGCACGGGGCCCGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509746.5
CDS GCA 90 bp TGTAGGAGGCCCACCACTGGCCTGCGACCTCCCAGGGCCAGCCTGTaGCCCCGCTATGCCACCATCCCGCCCGGGCGCCGAGCCAGTTAC +
Preference number: 5 (lower is better)
Translates to: CRRPTTGLRPPRASL*PRYATIPPGRRASY
Trigger: GTAACTGGCTCGGCGCCCGGGCGGGATGGTGGCATAGCGGGGGCACAGGCTGGCCCTGGGAGGTCGCAGGCCAGTGGTGGGCCTCCTACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000504194.5
ENST00000509772.1
CDS GCA 90 bp CGCCCGTCAACTCTGCGGGACCAGCACAGACAGCACCTGCACCCCTaGCCTCCGCCCCGGCCCAGTGACTGCTCTGCCCGCCCACAGGAG +
Preference number: 5 (lower is better)
Translates to: RPSTLRDQHRQHLHP*PPPRPSDCSARPQE
Trigger: CTCCTGTGGGCGGGCAGAGCAGTCACTGGGCCGGGGCGGAGGGCAGGGGTGCAGGTGCTGTCTGTGCTGGTCCCGCAGAGTTGACGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CCA 90 bp CATGCCCTCTGCCCTGCCACCTGCCAAAACCACCCGGCTGGTGTCTaGAGCTCGGCCAGGAGCCGCCAAGGGCCCTGCAGCCCCACCCCC +
Preference number: 5 (lower is better)
Translates to: HALCPATCQNHPAGV*SSARSRQGPCSPTP
Trigger: GGGGGTGGGGCTGCAGGGCCCTTGGCGGCTCCTGGCCGAGCTCCAGACACCAGCCGGGTGGTTTTGGCAGGTGGCAGGGCAGAGGGCATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS-3UTR CAA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCCACACTCCGCACCCTaGGGGGCGACGGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: REPHGQHGECPGPVPPARPHSAP*GATAQA
Trigger: TGCCTGGGCCGTCGCCCCCAAGGGTGCGGAGTGTGG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS TCA 90 bp GGGCTTAGCAGGCTCACCCGGGACGGGGCCCAAGCCAGGGAGGTCTaGTGTAGGAGGCCCACCACTGGCCTGCGACCTCCCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GLSRLTRDGAQAREV*CRRPTTGLRPPRAS
Trigger: GCTGGCCCTGGGAGGTCGCAGGCCAGTGGTGGGCCTCCTACATCAGACCTCCCTGGCTTGGGCCCCGTCCCGGGTGAGCCTGCTAAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000504194.5
ENST00000509772.1
CDS CCA 90 bp CACCGCCAACCACCAGAGCGACGCCAGGACGGGGACGCGGCTGCCTaGCCTGGACACCACAGCCCAGGAGCCACCCCACAAACCGTCTGC +
Preference number: 5 (lower is better)
Translates to: HRQPPERRQDGDAAA*PGHHSPGATPQTVC
Trigger: GCAGACGGTTTGTGGGGTGGCTCCTGGGCTGTGGTGTCCAGGCCAGGCAGCCGCGTCCCCGTCCTGGCGTCGCTCTGGTGGTTGGCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506631.5
ENST00000506998.5
ENST00000512266.5
CDS-3UTR CAA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGGCCTGGCTGTCGATGTaGACCGGGGTGGTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGAWLSM*TGVVAL
Trigger: CAAAGCCACCACCCCGGTCAACATCGACAGCCAGGC...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGAACCGAGGCTGTGCTaGGAAGCCGGGCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPAEPRLC*EAGLLG
Trigger: CCCCAGCAGCCCGGCTTCCAAGCACAGCCTCGGTTC...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTCCGCGGCCGCCCCGTaGATGCCATGCCGCTCACAG +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSESAAAP*MPCRSQ
Trigger: CTGTGAGCGGCATGGCATCAACGGGGCGGCCGCGGA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTCCGCGGCCGCCCCGTaGATGCCATGCCGCTCACAG +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGSAAAP*MPCRSQ
Trigger: CTGTGAGCGGCATGGCATCAACGGGGCGGCCGCGGA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCCGCGGCCGCCCCGTaGATGCCATGCCGCTCACAG +
Preference number: 5 (lower is better)
Translates to: REPHGQHGECPGPVPPARSAAAP*MPCRSQ
Trigger: CTGTGAGCGGCATGGCATCAACGGGGCGGCCGCGGA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS GCA 90 bp AGGTCACCGCCAACCACCAGAGCGACGCCAGGACGGGGACGCGGCTaGCTGGCCTGGACACCACAGCCCAGGAGCCACCCCACAAACCGT +
Preference number: 5 (lower is better)
Translates to: RSPPTTRATPGRGRG*LAWTPQPRSHPTNR
Trigger: ACGGTTTGTGGGGTGGCTCCTGGGCTGTGGTGTCCAGGCCAGGCAGCCGCGTCCCCGTCCTGGCGTCGCTCTGGTGGTTGGCGGTGACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506631.5
ENST00000506998.5
ENST00000512266.5
CDS GCA 90 bp CGCGGGGCGCCGCGTATGCCACGTGAGTTACGTCCTGACCCACGGTaGCCTCGGGAGCGTGCTCAGTCGAAGGGGGCACGAGGCTCACCT +
Preference number: 5 (lower is better)
Translates to: RGAPRMPRELRPDPR*PRERAQSKGARGSP
Trigger: AGGTGAGCCTCGTGCCCCCTTCGACTGAGCACGCTCCCGAGGGCACCGTGGGTCAGGACGTAACTCACGTGGCATACGCGGCGCCCCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS CCA 90 bp CCAACCACCAGAGCGACGCCAGGACGGGGACGCGGCTGCCTGGCCTaGACACCACAGCCCAGGAGCCACCCCACAAACCGTCTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: PTTRATPGRGRGCLA*TPQPRSHPTNRLRG
Trigger: ACCACGCAGACGGTTTGTGGGGTGGCTCCTGGGCTGTGGTGTCCAGGCCAGGCAGCCGCGTCCCCGTCCTGGCGTCGCTCTGGTGGTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506631.5
ENST00000506998.5
ENST00000512266.5
CDS CCA 90 bp AACAAGGGCTCTAAGGAGGGCCGGCTCCTGCGCGTCAGGATGAGGTaGGGGCCGGGCGACGAGCCCATCTCCGAAGGCTGCTGGCCGGAC +
Preference number: 5 (lower is better)
Translates to: NKGSKEGRLLRVRMR*GPGDEPISEGCWPD
Trigger: GTCCGGCCAGCAGCCTTCGGAGATGGGCTCGTCGCCCGGCCCCCACCTCATCCTGACGCGCAGGAGCCGGCCCTCCTTAGAGCCCTTGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515521.5
CDS-3UTR CAA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGCTGTCGGACTCCAGGTaGGAGCTCGTGGAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGLSDSR*ELVEGS
Trigger: GCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACAG...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGCAGCCGCGGATGGCTaGCAAGCTGTCGGACTCCAG +
Preference number: 5 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPAAADG*QAVGLQ
Trigger: CTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGC...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGTTGCTGCTGGTGCTGTaGTTCTGGTGGGCATCGGCG +
Preference number: 5 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGLLLVL*FWWASA
Trigger: CGCCGATGCCCACCAGAACAACAGCACCAGCAGCAA...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCCGGTCTGCGGGGATCTaGCTCATAGGAGGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: AGLLGTCCESGSARPSTSRSAGI*LIGGGS
Trigger: ACTGCCCCCTCCTATGAGCAAGATCCCCGCAGACCG...GGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGAACCGAGGCTGTGCTaGGAAGCCGGGCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: REPHGQHGECPGPVPPAREPRLC*EAGLLG
Trigger: CCCCAGCAGCCCGGCTTCCAAGCACAGCCTCGGTTC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGCGCTCTCCCGGCCGTaGCCTGTGGCGCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPALSRP*PVALLL
Trigger: CAAGAGAAGCGCCACAGGCAACGGCCGGGAGAGCGC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCGCTCTCCCGGCCGTaGCCTGTGGCGCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSEALSRP*PVALLL
Trigger: CAAGAGAAGCGCCACAGGCAACGGCCGGGAGAGCGC...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGCGCTCTCCCGGCCGTaGCCTGTGGCGCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: REPHGQHGECPGPVPPARALSRP*PVALLL
Trigger: CAAGAGAAGCGCCACAGGCAACGGCCGGGAGAGCGC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS GCA 90 bp CAGGGCCCGCAGGGTGCCGCTGTCTCTAGGGCGGCCCACAGATCCTaGTCGGTAGTCTCTGCAGAGCACAGACCGCTCCGCTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QGPQGAAVSRAAHRS*SVVSAEHRPLRCSW
Trigger: CCAGGAGCAGCGGAGCGGTCTGTGCTCTGCAGAGACTACCGAGCAGGATCTGTGGGCCGCCCTAGAGACAGCGGCACCCTGCGGGCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS GCA 90 bp GTCAGGATGAGGTGGGGGCCGGGCGACGAGCCCATCTCCGAAGGCTaGTGGCCGGACCCAGCTTCCCCAGGGCAGGACCTTTCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: VRMRWGPGDEPISEG*WPDPASPGQDLSSG
Trigger: TCCAGAGGAAAGGTCCTGCCCTGGGGAAGCTGGGTCCGGCCAGCAGCCTTCGGAGATGGGCTCGTCGCCCGGCCCCCACCTCATCCTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515521.5
CDS GCA 90 bp CTTCCCCCTGCAGGCGGGGAGCAGCCACGCACAAATGCTTGGCACTaGAGGGCACACACAGGAGCCGCAGCCACGGAGCGCAGAGCACCC +
Preference number: 5 (lower is better)
Translates to: LPPAGGEQPRTNAWH*RAHTGAAATERRAP
Trigger: GGGTGCTCTGCGCTCCGTGGCTGCGGCTCCTGTGTGTGCCCTGCAGTGCCAAGCATTTGTGCGTGGCTGCTCCCCGCCTGCAGGGGGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CCA 90 bp AGGATGAGGTGGGGGCCGGGCGACGAGCCCATCTCCGAAGGCTGCTaGCCGGACCCAGCTTCCCCAGGGCAGGACCTTTCCTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: RMRWGPGDEPISEGC*PDPASPGQDLSSGR
Trigger: CCTTCCAGAGGAAAGGTCCTGCCCTGGGGAAGCTGGGTCCGGCCAGCAGCCTTCGGAGATGGGCTCGTCGCCCGGCCCCCACCTCATCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515521.5
CDS-3UTR CAA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCCAGGCAATGGGCGTTaGGAGGCCTCCCCAGCTCTA +
Preference number: 5 (lower is better)
Translates to: GQGAPWPAWRMSGASASSPGNGR*EASPAL
Trigger: TAGAGCTGGGGAGGCCTCCAAACGCCCATTGCCTGG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCACCAGGCAATGGGCGTTaGGAGGCCTCCCCAGCTCTA +
Preference number: 5 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPPGNGR*EASPAL
Trigger: TAGAGCTGGGGAGGCCTCCAAACGCCCATTGCCTGG...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCAGCCGCGGATGGCTaGCAAGCTGTCGGACTCCAG +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSEAAADG*QAVGLQ
Trigger: CTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGC...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGACCACAAGGACCCGGTaGCTCTTCTCCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: PGCWGPAASPGVHGPPLPTTRTR*LFSSWW
Trigger: CCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGGT...CGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCGGTCTGCGGGGATCTaGCTCATAGGAGGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: GQGAPWPAWRMSGASASSRSAGI*LIGGGS
Trigger: ACTGCCCCCTCCTATGAGCAAGATCCCCGCAGACCG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGAACCGAGGCTGTGCTaGGAAGCCGGGCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPEPRLC*EAGLLG
Trigger: CCCCAGCAGCCCGGCTTCCAAGCACAGCCTCGGTTC...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCGAACCGAGGCTGTGCTaGGAAGCCGGGCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSEPRLC*EAGLLG
Trigger: CCCCAGCAGCCCGGCTTCCAAGCACAGCCTCGGTTC...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCGACACAGGCCTCCATaGGCATGCAGGGCGTCGTCT +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPARHRPP*ACRASS
Trigger: AGACGACGCCCTGCATGCCAATGGAGGCCTGTGTCG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTGCAGCACCAGAGGCTaGTCCCCGCCCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: REPHGQHGECPGPVPPARCSTRG*SPPTRK
Trigger: CTTCCTGGTGGGCGGGGACAAGCCTCTGGTGCTGCA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTGCAGCACCAGAGGCTaGTCCCCGCCCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGCSTRG*SPPTRK
Trigger: CTTCCTGGTGGGCGGGGACAAGCCTCTGGTGCTGCA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCACGGGCTTGGTGGGCTaGGCCTTGAGTCCCACTGAC +
Preference number: 5 (lower is better)
Translates to: GQGAPWPAWRMSGASASSTGLVG*ALSPTD
Trigger: GTCAGTGGGACTCAAGGCCAAGCCCACCAAGCCCGT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCACCTCCGTGACGGGCTaGGTGGGCTTGGCCTTGAGT +
Preference number: 5 (lower is better)
Translates to: GQGAPWPAWRMSGASASSTSVTG*VGLALS
Trigger: ACTCAAGGCCAAGCCCACCAAGCCCGTCACGGAGGT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp ACCCGCGGTCAGAGAGCGCTGCTGACGTCACCTCCACTCCCGAGCACCCACACCGCGCTCTCCCGGCCGTaGCCTGTGGCGCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: TRGQRALLTSPPLPSTHTALSRP*PVALLL
Trigger: CAAGAGAAGCGCCACAGGCAACGGCCGGGAGAGCGC...GGTGTGGGTGCTCGGGAGTGGAGGTGACGTCAGCAGCGCTCTCTGACCGCGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGCAGCAAGGTGCTGTaGGGGCTGCTGATGTCCCCC +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSEGSKVL*GLLMSP
Trigger: GGGGGACATCAGCAGCCCCAACAGCACCTTGCTGCC...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGGCAGCAAGGTGCTGTaGGGGCTGCTGATGTCCCCC +
Preference number: 5 (lower is better)
Translates to: REPHGQHGECPGPVPPARGSKVL*GLLMSP
Trigger: GGGGGACATCAGCAGCCCCAACAGCACCTTGCTGCC...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGGCAGCAAGGTGCTGTaGGGGCTGCTGATGTCCCCC +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPGSKVL*GLLMSP
Trigger: GGGGGACATCAGCAGCCCCAACAGCACCTTGCTGCC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGATGTCCACAGGAGAGTaGGCCAGGCCAGGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPAMSTGE*ARPGQL
Trigger: GAGCTGCCCTGGCCTGGCCAACTCTCCTGTGGACAT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS TCA 90 bp GCGAGGGCTGCCAGGGCCAGGGGAGCGAACGAGAAGGTGCTGCCGTaGTGGGCAACCTGGTACCTCCTGGCCACTCCCGAGAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: ARAARARGANEKVLP*WATWYLLATPEKWR
Trigger: CCTCCACTTCTCGGGAGTGGCCAGGAGGTACCAGGTTGCCCATCACGGCAGCACCTTCTCGTTCGCTCCCCTGGCCCTGGCAGCCCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508158.5
CDS TCA 90 bp TTCTCAACAAGGGCTCTAAGGAGGGCCGGCTCCTGCGCGTCAGGATaGGGTGGGGGCCGGGCGACGAGCCCATCTCCGAAGGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: FSTRALRRAGSCASG*GGGRATSPSPKAAG
Trigger: GCCAGCAGCCTTCGGAGATGGGCTCGTCGCCCGGCCCCCACCTCATCCTGACGCGCAGGAGCCGGCCCTCCTTAGAGCCCTTGTTGAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515521.5
CDS GCA 90 bp CTGCCAAGGCGAGGGCTGCCAGGGCCAGGGGAGCGAACGAGAAGGTaGTGCCGTGATGGGCAACCTGGTACCTCCTGGCCACTCCCGAGA +
Preference number: 5 (lower is better)
Translates to: LPRRGLPGPGERTRR*CRDGQPGTSWPLPR
Trigger: TCTCGGGAGTGGCCAGGAGGTACCAGGTTGCCCATCACGGCAGCACCTTCTCGTTCGCTCCCCTGGCCCTGGCAGCCCTCGCCTTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508158.5
CDS GCA 90 bp ACAGGCTTGCTAGAGCGAAAGCAGCTGGGCGCGGGGCGCCGCGTATaGCACGTGAGTTACGTCCTGACCCACGGTGCCCTCGGGAGCGTG +
Preference number: 5 (lower is better)
Translates to: TGLLERKQLGAGRRV*HVSYVLTHGALGSV
Trigger: CACGCTCCCGAGGGCACCGTGGGTCAGGACGTAACTCACGTGGCATACGCGGCGCCCCGCGCCCAGCTGCTTTCGCTCTAGCAAGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS GCA 90 bp GCCAGCGTTCAGCATGGGCATCTCCATGCCCTCTGCCCTGCCACCTaGCAAAACCACCCGGCTGGTGTCTGGAGCTCGGCCAGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: ASVQHGHLHALCPAT*QNHPAGVWSSARSR
Trigger: GCGGCTCCTGGCCGAGCTCCAGACACCAGCCGGGTGGTTTTGGCAGGTGGCAGGGCAGAGGGCATGGAGATGCCCATGCTGAACGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS GCA 90 bp TGCAGGGCACACACAGGAGCCGCAGCCACGGAGCGCAGAGCACCCTaGTCACCTGCCTCCACCAGGGCCATGCCAGCTGGTGCTATCGCA +
Preference number: 5 (lower is better)
Translates to: CRAHTGAAATERRAP*SPASTRAMPAGAIA
Trigger: TGCGATAGCACCAGCTGGCATGGCCCTGGTGGAGGCAGGTGAGCAGGGTGCTCTGCGCTCCGTGGCTGCGGCTCCTGTGTGTGCCCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS GCA 90 bp GGGAACAACGCTTCCCCCTGCAGGCGGGGAGCAGCCACGCACAAATaGTTGGCACTGCAGGGCACACACAGGAGCCGCAGCCACGGAGCG +
Preference number: 5 (lower is better)
Translates to: GNNASPCRRGAATHK*LALQGTHRSRSHGA
Trigger: CGCTCCGTGGCTGCGGCTCCTGTGTGTGCCCTGCAGTGCCAAGCATTTGTGCGTGGCTGCTCCCCGCCTGCAGGGGGAAGCGTTGTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS GCA 90 bp TACCAGGGTCAGCCGGCAGAGCCCGGGCGGCCCCGAGCAAAGGCCTaGGTCCCACACAGGGACATTGCTCCTGAGCTCACACTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: YQGQPAEPGRPRAKA*VPHRDIAPELTLPG
Trigger: TCCTGGGAGTGTGAGCTCAGGAGCAATGTCCCTGTGTGGGACGCAGGCCTTTGCTCGGGGCCGCCCGGGCTCTGCCGGCTGACCCTGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643191.1
CDS CCA 90 bp TGTCCGCACTGCCACTCCCGGAGCACGTGGACCGGGAGCCAGCGCTaGTTGAAACCACAGCCAGCACCCACGGTGCCCCTCTTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: CPHCHSRSTWTGSQR*LKPQPAPTVPLLEG
Trigger: CCCTTCCAAGAGGGGCACCGTGGGTGCTGGCTGTGGTTTCAACCAGCGCTGGCTCCCGGTCCACGTGCTCCGGGAGTGGCAGTGCGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp GAGTCCTGGTCGCTGGTGTGTCCGCACTGCCACTCCCGGAGCACGTaGACCGGGAGCCAGCGCTGGTTGAAACCACAGCCAGCACCCACG +
Preference number: 5 (lower is better)
Translates to: ESWSLVCPHCHSRST*TGSQRWLKPQPAPT
Trigger: CGTGGGTGCTGGCTGTGGTTTCAACCAGCGCTGGCTCCCGGTCCACGTGCTCCGGGAGTGGCAGTGCGGACACACCAGCGACCAGGACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp CTGCCATGGGTCCCACTTCCTGGTCTGGAAGGTCCTGGCACTTCCTaGGGGGTGGAGGGCGGCGGCAGCAAGGTGCTGTTGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LPWVPLPGLEGPGTS*GVEGGGSKVLLGLL
Trigger: CAGCAGCCCCAACAGCACCTTGCTGCCGCCGCCCTCCACCCCCCAGGAAGTGCCAGGACCTTCCAGACCAGGAAGTGGGACCCATGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000504194.5
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCCAGGCAATGGGCGTTaGGAGGCCTCCCCAGCTCTA +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSEPGNGR*EASPAL
Trigger: TAGAGCTGGGGAGGCCTCCAAACGCCCATTGCCTGG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp AGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACCCACACTCCGCACCCTaGGGGGCGACGGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: RTGLCLGALSCYEHSGLHPHSAP*GATAQA
Trigger: TGCCTGGGCCGTCGCCCCCAAGGGTGCGGAGTGTGG...GTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCCCACACTCCGCACCCTaGGGGGCGACGGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPPHSAP*GATAQA
Trigger: TGCCTGGGCCGTCGCCCCCAAGGGTGCGGAGTGTGG...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCTGCACGCTGGGGTTCAAGGGCTCTGAATaGCTCGCACAAAGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: AQLATLLSRRRRQLCTLGFKGSE*LAQRLG
Trigger: CCCGAGCCTTTGTGCGAGCAATTCAGAGCCCTTGAA...CCCCAGCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCTGTCGGACTCCAGGTaGGAGCTCGTGGAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: GQGAPWPAWRMSGASASSLSDSR*ELVEGS
Trigger: GCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACAG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCAGCCGCGGATGGCTaGCAAGCTGTCGGACTCCAG +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPAAADG*QAVGLQ
Trigger: CTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGC...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGCCACGACTCCAGCCTaGTCAGTGCTCAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPATTPA*SVLSCT
Trigger: TGTGCAGCTGAGCACTGACAAGGCTGGAGTCGTGGC...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGACCACAAGGACCCGGTaGCTCTTCTCCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPATTRTR*LFSSWW
Trigger: CCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGGT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGGCAGTGTGCCGCAGTaGATGCTGGACCAGCCATCG +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPGSVPQ*MLDQPS
Trigger: CGATGGCTGGTCCAGCATCAACTGCGGCACACTGCC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGGCAGTGTGCCGCAGTaGATGCTGGACCAGCCATCG +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSEGSVPQ*MLDQPS
Trigger: CGATGGCTGGTCCAGCATCAACTGCGGCACACTGCC...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCGGTCTGCGGGGATCTaGCTCATAGGAGGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGRSAGI*LIGGGS
Trigger: ACTGCCCCCTCCTATGAGCAAGATCCCCGCAGACCG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCCGAGCAGACGTGCGTaGAGAAGGCTGAGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPAPSRRA*RRLSES
Trigger: GGACTCACTCAGCCTTCTCAACGCACGTCTGCTCGG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCCGAGCAGACGTGCGTaGAGAAGGCTGAGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: SRAAGDLLRVRECTALHFPSRRA*RRLSES
Trigger: GGACTCACTCAGCCTTCTCAACGCACGTCTGCTCGG...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCCTGGCTGTCGATGTaGACCGGGGTGGTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSEAWLSM*TGVVAL
Trigger: CAAAGCCACCACCCCGGTCAACATCGACAGCCAGGC...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCGACACAGGCCTCCATaGGCATGCAGGGCGTCGTCT +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSERHRPP*ACRASS
Trigger: AGACGACGCCCTGCATGCCAATGGAGGCCTGTGTCG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCGACACAGGCCTCCATaGGCATGCAGGGCGTCGTCT +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPRHRPP*ACRASS
Trigger: AGACGACGCCCTGCATGCCAATGGAGGCCTGTGTCG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGATGGAGAAGCCCGCCTaGACAGCCACCACGCAGGAT +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPAMEKPA*TATTQD
Trigger: ATCCTGCGTGGTGGCTGTCAAGGCGGGCTTCTCCAT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCATGGAGAAGCCCGCCTaGACAGCCACCACGCAGGAT +
Preference number: 5 (lower is better)
Translates to: GQGAPWPAWRMSGASASSMEKPA*TATTQD
Trigger: ATCCTGCGTGGTGGCTGTCAAGGCGGGCTTCTCCAT...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTGCAGCACCAGAGGCTaGTCCCCGCCCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPCSTRG*SPPTRK
Trigger: CTTCCTGGTGGGCGGGGACAAGCCTCTGGTGCTGCA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp ACACCACCTGCTACGGGGGCCGCCGGTGGGTCCGAGCTGCACTCTCAAGGCTCTTGCAGCACCAGAGGCTaGTCCCCGCCCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: TPPATGAAGGSELHSQGSCSTRG*SPPTRK
Trigger: CTTCCTGGTGGGCGGGGACAAGCCTCTGGTGCTGCA...AGAGCCTTGAGAGTGCAGCTCGGACCCACCGGCGGCCCCCGTAGCAGGTGGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTACGGGCTTGGTGGGCTaGGCCTTGAGTCCCACTGAC +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGTGLVG*ALSPTD
Trigger: GTCAGTGGGACTCAAGGCCAAGCCCACCAAGCCCGT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGACCTCCGTGACGGGCTaGGTGGGCTTGGCCTTGAGT +
Preference number: 5 (lower is better)
Translates to: REPHGQHGECPGPVPPARTSVTG*VGLALS
Trigger: ACTCAAGGCCAAGCCCACCAAGCCCGTCACGGAGGT...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTACCTCCGTGACGGGCTaGGTGGGCTTGGCCTTGAGT +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGTSVTG*VGLALS
Trigger: ACTCAAGGCCAAGCCCACCAAGCCCGTCACGGAGGT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTATGTCCACAGGAGAGTaGGCCAGGCCAGGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGMSTGE*ARPGQL
Trigger: GAGCTGCCCTGGCCTGGCCAACTCTCCTGTGGACAT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS TCA 90 bp ACGTGCTCATCCTCCACCGTCTGGATGCCCCCGGCCTCCACTTCCTaGGACTGCCTCTTCCAGATCTGGGCGGTGCCCTCCTGCGCGAGG +
Preference number: 5 (lower is better)
Translates to: TCSSSTVWMPPASTS*DCLFQIWAVPSCAR
Trigger: CCTCGCGCAGGAGGGCACCGCCCAGATCTGGAAGAGGCAGTCTCAGGAAGTGGAGGCCGGGGGCATCCAGACGGTGGAGGATGAGCACGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
CDS GCA 90 bp GAAATCCGCAGGGCTCCCTCTCATGACGCAGCTGAGCACACAGGGTaGCTGTCCCGAAAGCGTGAATCCGTAGCCGGCCCTCCCCCGGGC +
Preference number: 5 (lower is better)
Translates to: EIRRAPSHDAAEHTG*LSRKRESVAGPPPG
Trigger: GCCCGGGGGAGGGCCGGCTACGGATTCACGCTTTCGGGACAGGCACCCTGTGTGCTCAGCTGCGTCATGAGAGGGAGCCCTGCGGATTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp CTCCGCCCCGGCCCAGTGACTGCTCTGCCCGCCCACAGGAGACCCTaGGACACGCAGCAAGCTCTGTCCCCTCCAACACCCATTCAGTCA +
Preference number: 5 (lower is better)
Translates to: LRPGPVTALPAHRRP*DTQQALSPPTPIQS
Trigger: TGACTGAATGGGTGTTGGAGGGGACAGAGCTTGCTGCGTGTCCCAGGGTCTCCTGTGGGCGGGCAGAGCAGTCACTGGGCCGGGGCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CCA 90 bp ACAACGCTTCCCCCTGCAGGCGGGGAGCAGCCACGCACAAATGCTTaGCACTGCAGGGCACACACAGGAGCCGCAGCCACGGAGCGCAGA +
Preference number: 5 (lower is better)
Translates to: TTLPPAGGEQPRTNA*HCRAHTGAAATERR
Trigger: TCTGCGCTCCGTGGCTGCGGCTCCTGTGTGTGCCCTGCAGTGCCAAGCATTTGTGCGTGGCTGCTCCCCGCCTGCAGGGGGAAGCGTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCTGTCGGACTCCAGGTaGGAGCTCGTGGAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSELSDSR*ELVEGS
Trigger: GCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACAG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCCACGACTCCAGCCTaGTCAGTGCTCAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSEATTPA*SVLSCT
Trigger: TGTGCAGCTGAGCACTGACAAGGCTGGAGTCGTGGC...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTTGCTGCTGGTGCTGTaGTTCTGGTGGGCATCGGCG +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPLLLVL*FWWASA
Trigger: CGCCGATGCCCACCAGAACAACAGCACCAGCAGCAA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTTGCTGCTGGTGCTGTaGTTCTGGTGGGCATCGGCG +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSELLLVL*FWWASA
Trigger: CGCCGATGCCCACCAGAACAACAGCACCAGCAGCAA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTACCACAAGGACCCGGTaGCTCTTCTCCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGTTRTR*LFSSWW
Trigger: CCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGGT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp TCCTCTCTCCAGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACAGGCAGTGTGCCGCAGTaGATGCTGGACCAGCCATCG +
Preference number: 5 (lower is better)
Translates to: SSLQGMATQATALGPLETGSVPQ*MLDQPS
Trigger: CGATGGCTGGTCCAGCATCAACTGCGGCACACTGCC...TGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCCGAGCAGACGTGCGTaGAGAAGGCTGAGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSEPSRRA*RRLSES
Trigger: GGACTCACTCAGCCTTCTCAACGCACGTCTGCTCGG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCTGCTCAGGCTGTTGTaGCTGACGCAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPALLRLL*LTQSFR
Trigger: CCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGCTCCTCTCTCCAGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAACTGCTCAGGCTGTTGTaGCTGACGCAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GSSLQGMATQATALGPLELLRLL*LTQSFR
Trigger: CCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAG...TTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCTGGCTGTCGATGTaGACCGGGGTGGTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPAWLSM*TGVVAL
Trigger: CAAAGCCACCACCCCGGTCAACATCGACAGCCAGGC...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCAGTGCTTGGTGGCCTaGTCCTTCTCGGGTGCCAAA +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPAQCLVA*SFSGAK
Trigger: TTTGGCACCCGAGAAGGACAAGGCCACCAAGCACTG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCAGTGCTTGGTGGCCTaGTCCTTCTCGGGTGCCAAA +
Preference number: 5 (lower is better)
Translates to: GQGAPWPAWRMSGASASSQCLVA*SFSGAK
Trigger: TTTGGCACCCGAGAAGGACAAGGCCACCAAGCACTG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTTGGTGGGCTTGGCCTaGAGTCCCACTGACCGGTTA +
Preference number: 5 (lower is better)
Translates to: GQGAPWPAWRMSGASASSLVGLA*SPTDRL
Trigger: TAACCGGTCAGTGGGACTCAAGGCCAAGCCCACCAA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS GCA 90 bp TCCCCGCCCACCAGGAAGAGGTCCGCGGCCGCCCCGTTGATGCCATaGCGCTCACAGAGTCCGGACAGGATGTCTTTGATGGAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: SPPTRKRSAAAPLMP*RSQSPDRMSLMEKP
Trigger: GGGCTTCTCCATCAAAGACATCCTGTCCGGACTCTGTGAGCGGCATGGCATCAACGGGGCGGCCGCGGACCTCTTCCTGGTGGGCGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000513991.5
ENST00000515521.5
CDS GCA 90 bp CGGGAGCGTGCTCAGTCGAAGGGGGCACGAGGCTCACCTTCCGGATaGGAAGCCCACACACCCGTGACTGCACACTGCTCTGCATGTGGG +
Preference number: 5 (lower is better)
Translates to: RERAQSKGARGSPSG*EAHTPVTAHCSACG
Trigger: CCCACATGCAGAGCAGTGTGCAGTCACGGGTGTGTGGGCTTCGCATCCGGAAGGTGAGCCTCGTGCCCCCTTCGACTGAGCACGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS GCA 90 bp ACACACAGGAGCCGCAGCCACGGAGCGCAGAGCACCCTGCTCACCTaGCTCCACCAGGGCCATGCCAGCTGGTGCTATCGCAATCACCTC +
Preference number: 5 (lower is better)
Translates to: THRSRSHGAQSTLLT*LHQGHASWCYRNHL
Trigger: GAGGTGATTGCGATAGCACCAGCTGGCATGGCCCTGGTGGAGGCAGGTGAGCAGGGTGCTCTGCGCTCCGTGGCTGCGGCTCCTGTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS GCA 90 bp TTGCTCGGAGAAGAGCACCTCACAGCATGGCCAGAAGCTCAGGGCTaGCCACGTCAAGCCCTCACCAGCGCGTCCTTCAGCGCCCCGGGA +
Preference number: 5 (lower is better)
Translates to: LLGEEHLTAWPEAQG*PRQALTSASFSAPG
Trigger: TCCCGGGGCGCTGAAGGACGCGCTGGTGAGGGCTTGACGTGGGCAGCCCTGAGCTTCTGGCCATGCTGTGAGGTGCTCTTCTCCGAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CCA 90 bp TTCCCAATGCCGCTGTCACTGTTGCTGCTGGTGCTGTTGTTCTGGTaGGCATCGGCGTCCCCGTCCAGAAAGGCGCGGGCCCGCATGCCC +
Preference number: 5 (lower is better)
Translates to: FPMPLSLLLLVLLFW*ASASPSRKARARMP
Trigger: GGGCATGCGGGCCCGCGCCTTTCTGGACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp GATCAGAACCTGGAGGTACCTGGTCTGGAAGGTCCTGGCACTTCCTaGGGGGTGGAGGGCGGCGGCAGCAAGGTGCTGTTGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: DQNLEVPGLEGPGTS*GVEGGGSKVLLGLL
Trigger: CAGCAGCCCCAACAGCACCTTGCTGCCGCCGCCCTCCACCCCCCAGGAAGTGCCAGGACCTTCCAGACCAGGTACCTCCAGGTTCTGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTTCAAGGGCTCTGAATaGCTCGCACAAAGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPAFKGSE*LAQRLG
Trigger: CCCGAGCCTTTGTGCGAGCAATTCAGAGCCCTTGAA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCACGACTCCAGCCTaGTCAGTGCTCAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPATTPA*SVLSCT
Trigger: TGTGCAGCTGAGCACTGACAAGGCTGGAGTCGTGGC...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGATGCCGCTGTCACTGTaGCTGCTGGTGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPAMPLSL*LLVLLF
Trigger: GAACAACAGCACCAGCAGCAACAGTGACAGCGGCAT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCTGCTCAGGCTGTTGTaGCTGACGCAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPLLRLL*LTQSFR
Trigger: CCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCTGCTCAGGCTGTTGTaGCTGACGCAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGLLRLL*LTQSFR
Trigger: CCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCTTGCTGCTCAGGCTGTaGTTGCTGACGCAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: SRAAGDLLRVRECTALHFLLLRL*LLTQSF
Trigger: GAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAA...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp CGGCGAGGTCCAGGCTACAGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCGAACCGAGGCTGTGCTaGGAAGCCGGGCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RRGPGYRSDKTKPHGRPLEPRLC*EAGLLG
Trigger: CCCCAGCAGCCCGGCTTCCAAGCACAGCCTCGGTTC...GAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGACCTCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCAGTGCTTGGTGGCCTaGTCCTTCTCGGGTGCCAAA +
Preference number: 5 (lower is better)
Translates to: REPHGQHGECPGPVPPARQCLVA*SFSGAK
Trigger: TTTGGCACCCGAGAAGGACAAGGCCACCAAGCACTG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTATGGAGAAGCCCGCCTaGACAGCCACCACGCAGGAT +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPMEKPA*TATTQD
Trigger: ATCCTGCGTGGTGGCTGTCAAGGCGGGCTTCTCCAT...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCCGGACAGGATGTCTTaGATGGAGAAGCCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGPDRMS*MEKPAL
Trigger: CAAGGCGGGCTTCTCCATCAAAGACATCCTGTCCGG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCCGGACAGGATGTCTTaGATGGAGAAGCCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPPDRMS*MEKPAL
Trigger: CAAGGCGGGCTTCTCCATCAAAGACATCCTGTCCGG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCTAGGCGCAGGTCCCTaGACTCCAAGATGCTACTGT +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPALGAGP*TPRCYC
Trigger: ACAGTAGCATCTTGGAGTCAAGGGACCTGCGCCTAG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTTGGTGGGCTTGGCCTaGAGTCCCACTGACCGGTTA +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPLVGLA*SPTDRL
Trigger: TAACCGGTCAGTGGGACTCAAGGCCAAGCCCACCAA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGCTCTTGCTAAAGCCCTaGGCCACAGCAGCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSELLLKP*ATAAGV
Trigger: CACTCCAGCTGCTGTGGCCAAGGGCTTTAGCAAGAG...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCTCTTGCTAAAGCCCTaGGCCACAGCAGCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGLLLKP*ATAAGV
Trigger: CACTCCAGCTGCTGTGGCCAAGGGCTTTAGCAAGAG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS GCA 90 bp TGGTCACCAGCGAGTGGATTTTCTGCTCTGCCCGCAGGCGCCGCATaGAGCCGCGGATGGCTTGCAAGCTGTCGGACTCCAGGTTGGAGC +
Preference number: 5 (lower is better)
Translates to: WSPASGFSALPAGAA*SRGWLASCRTPGWS
Trigger: GCTCCAACCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCACTCGCTGGTGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 90 bp CCATCAGGGTCAGCTCGGCCACGTGCTCATCCTCCACCGTCTGGATaGCCCCGGCCTCCACTTCCTGAGACTGCCTCTTCCAGATCTGGG +
Preference number: 5 (lower is better)
Translates to: PSGSARPRAHPPPSG*PRPPLPETASSRSG
Trigger: CCCAGATCTGGAAGAGGCAGTCTCAGGAAGTGGAGGCCGGGGGCATCCAGACGGTGGAGGATGAGCACGTGGCCGAGCTGACCCTGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
CDS CCA 90 bp TGCTGGACCAGCCATCGGTGGAATCTGTGTAAGAGTCCTGGTCGCTaGTGTGTCCGCACTGCCACTCCCGGAGCACGTGGACCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: CWTSHRWNLCKSPGR*CVRTATPGARGPGA
Trigger: GGCTCCCGGTCCACGTGCTCCGGGAGTGGCAGTGCGGACACACCAGCGACCAGGACTCTTACACAGATTCCACCGATGGCTGGTCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTTCAAGGGCTCTGAATaGCTCGCACAAAGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPFKGSE*LAQRLG
Trigger: CCCGAGCCTTTGTGCGAGCAATTCAGAGCCCTTGAA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp GGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCACAACATCAAATCGAGTaGCGGCCGACTCTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: GCWGPAASPGVHGPPLPPQHQIE*RPTLKG
Trigger: CCCTTTCAGAGTCGGCCGCAACTCGATTTGATGTTG...TGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GGGTGGAGGCTGCAGAGTGGCACCGGTGGGCATGCCAGGCACCTCAGGCTTTCTTTGCTGCTGGTGCTGTaGTTCTGGTGGGCATCGGCG +
Preference number: 5 (lower is better)
Translates to: GWRLQSGTGGHARHLRLSLLLVL*FWWASA
Trigger: CGCCGATGCCCACCAGAACAACAGCACCAGCAGCAA...AGAAAGCCTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTATGCCGCTGTCACTGTaGCTGCTGGTGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPMPLSL*LLVLLF
Trigger: GAACAACAGCACCAGCAGCAACAGTGACAGCGGCAT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTATGCCGCTGTCACTGTaGCTGCTGGTGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAAMPLSL*LLVLLF
Trigger: GAACAACAGCACCAGCAGCAACAGTGACAGCGGCAT...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp AATGCCCGTGACACCCGCGGTCAGAGAGCGCTGCTGACGTCACCTCCACTCCCGCCGAGCAGACGTGCGTaGAGAAGGCTGAGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: NARDTRGQRALLTSPPLPPSRRA*RRLSES
Trigger: GGACTCACTCAGCCTTCTCAACGCACGTCTGCTCGG...CGGGAGTGGAGGTGACGTCAGCAGCGCTCTCTGACCGCGGGTGTCACGGGCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTTGCTGCTCAGGCTGTaGTTGCTGACGCAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSELLLRL*LLTQSF
Trigger: GAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTTGCTGCTCAGGCTGTaGTTGCTGACGCAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGLLLRL*LLTQSF
Trigger: GAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGTAGCCCCTCCCATGCCACACGTGGCCTCCAAAGGCCCAGATATGTACAGATCTCCGCGGCCGCCCCGTaGATGCCATGCCGCTCACAG +
Preference number: 5 (lower is better)
Translates to: GSPSHATRGLQRPRYVQISAAAP*MPCRSQ
Trigger: CTGTGAGCGGCATGGCATCAACGGGGCGGCCGCGGA...GATCTGTACATATCTGGGCCTTTGGAGGCCACGTGTGGCATGGGAGGGGCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCCAAGATGCTACTGTCTaGGTGCAGCACCAGAGGCTT +
Preference number: 5 (lower is better)
Translates to: GQGAPWPAWRMSGASASSQDATV*VQHQRL
Trigger: AAGCCTCTGGTGCTGCACCAAGACAGTAGCATCTTG...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCTAGGCGCAGGTCCCTaGACTCCAAGATGCTACTGT +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGLGAGP*TPRCYC
Trigger: ACAGTAGCATCTTGGAGTCAAGGGACCTGCGCCTAG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTTGGTGGGCTTGGCCTaGAGTCCCACTGACCGGTTA +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPLVGLA*SPTDRL
Trigger: TAACCGGTCAGTGGGACTCAAGGCCAAGCCCACCAA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CCACCAGCAAACAGTGGCAGCCGGGGGCCCACTGTCCTTTCTGACTGGAAGCTGGGCAGCAAGGTGCTGTaGGGGCTGCTGATGTCCCCC +
Preference number: 5 (lower is better)
Translates to: PPANSGSRGPTVLSDWKLGSKVL*GLLMSP
Trigger: GGGGGACATCAGCAGCCCCAACAGCACCTTGCTGCC...CAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCGGCTGCCACTGTTTGCTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGACATCGATGATTCTGTaGACTGGGAGGTCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPATSMIL*TGRSRL
Trigger: CAGCCGAGACCTCCCAGTCAACAGAATCATCGATGT...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCTCAGAAATGCTTTATaGGGCAGCAGGAGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: REPHGQHGECPGPVPPARLRNAL*GSRRPG
Trigger: CCCTGGCCTCCTGCTGCCCAATAAAGCATTTCTGAG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336727.7
CDS TCA 90 bp GTGAACAACACAGAGGCTGCCAAAGGGAACAGACAGTGCCTGCGGTaGCGACGCCCGGGCCCCGTGCAACACTCACCAGCCTCACCAGCA +
Preference number: 5 (lower is better)
Translates to: VNNTEAAKGNRQCLR*RRPGPVQHSPASPA
Trigger: TGCTGGTGAGGCTGGTGAGTGTTGCACGGGGCCCGGGCGTCGTCACCGCAGGCACTGTCTGTTCCCTTTGGCAGCCTCTGTGTTGTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509746.5
CDS GCA 90 bp CGGGAGATGAATGCAGCAGTGCTTGGTGGCCTTGTCCTTCTCGGGTaGCAAAGTCCTGCAGGCCTCCGACAGGTCCAGGCTCCCCGCAGA +
Preference number: 5 (lower is better)
Translates to: REMNAAVLGGLVLLG*QSPAGLRQVQAPRR
Trigger: TCTGCGGGGAGCCTGGACCTGTCGGAGGCCTGCAGGACTTTGGCACCCGAGAAGGACAAGGCCACCAAGCACTGCTGCATTCATCTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000510803.1
ENST00000513991.5
ENST00000515521.5
CDS GCA 90 bp GCACCTGGCTTCTTAACACAGATAGGAAGCTCCAGTGCTGCGGGCTaGAGAGAGACCCCAGTAGAGAGCGGGAGGGCCAGGGACGCTCCC +
Preference number: 5 (lower is better)
Translates to: APGFLTQIGSSSAAG*RETPVESGRARDAP
Trigger: GGGAGCGTCCCTGGCCCTCCCGCTCTCTACTGGGGTCTCTCTGCAGCCCGCAGCACTGGAGCTTCCTATCTGTGTTAAGAAGCCAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS GCA 90 bp AGCCTCATCTTCGCCAGCGTTCAGCATGGGCATCTCCATGCCCTCTaGCCTGCCACCTGCCAAAACCACCCGGCTGGTGTCTGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: SLIFASVQHGHLHAL*PATCQNHPAGVWSS
Trigger: CGAGCTCCAGACACCAGCCGGGTGGTTTTGGCAGGTGGCAGGGCAGAGGGCATGGAGATGCCCATGCTGAACGCTGGCGAAGATGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CCA 90 bp GACGGGGAGGGAGGACGCCGGGAATTCCAGACAGCCATTGGTGTCTaGGTCGGCCGTGCACTCAAACCCAAACCGCCGAGCAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: DGEGGRREFQTAIGV*VGRALKPKPPSNAL
Trigger: CAAGGCATTGCTCGGCGGTTTGGGTTTGAGTGCACGGCCGACCCAGACACCAATGGCTGTCTGGAATTCCCGGCGTCCTCCCTCCCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp ACTGCAGGACGGGGAGGGAGGACGCCGGGAATTCCAGACAGCCATTaGTGTCTGGGTCGGCCGTGCACTCAAACCCAAACCGCCGAGCAA +
Preference number: 5 (lower is better)
Translates to: TAGRGGRTPGIPDSH*CLGRPCTQTQTAEQ
Trigger: TTGCTCGGCGGTTTGGGTTTGAGTGCACGGCCGACCCAGACACCAATGGCTGTCTGGAATTCCCGGCGTCCTCCCTCCCCGTCCTGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp AAGTTCCCAATGCCGCTGTCACTGTTGCTGCTGGTGCTGTTGTTCTaGTGGGCATCGGCGTCCCCGTCCAGAAAGGCGCGGGCCCGCATG +
Preference number: 5 (lower is better)
Translates to: KFPMPLSLLLLVLLF*WASASPSRKARARM
Trigger: CATGCGGGCCCGCGCCTTTCTGGACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp CCACCAGCAAACAGTGGCAGCCGGGGGCCCACTGTCCTTTCTGACTaGAAGCTGAGCAGACCACGCTTACGGGGCCAAGGTGGAGGGATC +
Preference number: 5 (lower is better)
Translates to: PPANSGSRGPTVLSD*KLSRPRLRGQGGGI
Trigger: GATCCCTCCACCTTGGCCCCGTAAGCGTGGTCTGCTCAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCGGCTGCCACTGTTTGCTGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS CCA 90 bp TCCTGCTCGGTAGTCTCTGCAGAGCACAGACCGCTCCGCTGCTCCTaGGCCCTTCCCTACTCACAGAGAAGTAGCGGACACCGACGGGGT +
Preference number: 5 (lower is better)
Translates to: SCSVVSAEHRPLRCS*ALPYSQRSSGHRRG
Trigger: ACCCCGTCGGTGTCCGCTACTTCTCTGTGAGTAGGGAAGGGCCCAGGAGCAGCGGAGCGGTCTGTGCTCTGCAGAGACTACCGAGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS-3UTR CAA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCTTTAGAATCCAGCTaGGGCTTCAGCCAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: GQGAPWPAWRMSGASASSALESS*GFSQPF
Trigger: AAAAGGCTGGCTGAAGCCCAAGCTGGATTCTAAAGC...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCAACATCAAATCGAGTaGCGGCCGACTCTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGQHQIE*RPTLKG
Trigger: CCCTTTCAGAGTCGGCCGCAACTCGATTTGATGTTG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp AACCAGCAGGTGAGGAGGGGGTCACGGAGACCACCAGCAAACAGTGGCAGCCGGCTGTCGGACTCCAGGTaGGAGCTCGTGGAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: NQQVRRGSRRPPANSGSRLSDSR*ELVEGS
Trigger: GCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACAG...CCGGCTGCCACTGTTTGCTGGTGGTCTCCGTGACCCCCTCCTCACCTGCTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp GCACACTCCATGACGCGCACCCTGAGCGGCTCCTCTCTCCAGGGGATGGCCACGATGCCGCTGTCACTGTaGCTGCTGGTGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: AHSMTRTLSGSSLQGMATMPLSL*LLVLLF
Trigger: GAACAACAGCACCAGCAGCAACAGTGACAGCGGCAT...CGTGGCCATCCCCTGGAGAGAGGAGCCGCTCAGGGTGCGCGTCATGGAGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCGGCAGTGTGCCGCAGTaGATGCTGGACCAGCCATCG +
Preference number: 5 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPGSVPQ*MLDQPS
Trigger: CGATGGCTGGTCCAGCATCAACTGCGGCACACTGCC...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp ATCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTCGGTCTGCGGGGATCTaGCTCATAGGAGGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: IAPSSKPQQRCPRTPEHTRSAGI*LIGGGS
Trigger: ACTGCCCCCTCCTATGAGCAAGATCCCCGCAGACCG...AGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTTGCTGCTCAGGCTGTaGTTGCTGACGCAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPLLLRL*LLTQSF
Trigger: GAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CCACCAGCAAACAGTGGCAGCCGGGGGCCCACTGTCCTTTCTGACTGGAAGCTGCGACACAGGCCTCCATaGGCATGCAGGGCGTCGTCT +
Preference number: 5 (lower is better)
Translates to: PPANSGSRGPTVLSDWKLRHRPP*ACRASS
Trigger: AGACGACGCCCTGCATGCCAATGGAGGCCTGTGTCG...CAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCGGCTGCCACTGTTTGCTGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCTAGGCGCAGGTCCCTaGACTCCAAGATGCTACTGT +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPLGAGP*TPRCYC
Trigger: ACAGTAGCATCTTGGAGTCAAGGGACCTGCGCCTAG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTACATCGATGATTCTGTaGACTGGGAGGTCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGTSMIL*TGRSRL
Trigger: CAGCCGAGACCTCCCAGTCAACAGAATCATCGATGT...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTACATCGATGATTCTGTaGACTGGGAGGTCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPTSMIL*TGRSRL
Trigger: CAGCCGAGACCTCCCAGTCAACAGAATCATCGATGT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCTTCAAACAGTGCCCTaGTTCCCCACACAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: REPHGQHGECPGPVPPARLQTVP*FPTQAA
Trigger: AGCTGCTTGTGTGGGGAACAAGGGCACTGTTTGAAG...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344733.9
CDS TCA 90 bp GCAGATCTGCCAGGTATGGGGATGGGCACGAGTGGATGGACTGTCTaGAGCGAACACTCCCATCTCCCAGGTACTCGGGAGGCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: ADLPGMGMGTSGWTV*SEHSHLPGTREAWP
Trigger: GGGCCAGGCCTCCCGAGTACCTGGGAGATGGGAGTGTTCGCTTCAGACAGTCCATCCACTCGTGCCCATCCCCATACCTGGCAGATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS TCA 90 bp GCGGCCCCGAGCAAAGGCCTGCGTCCCACACAGGGACATTGCTCCTaGGCTCACACTCCCAGGAGGCCAATTATTGCAGTTTCTCCCGCG +
Preference number: 5 (lower is better)
Translates to: AAPSKGLRPTQGHCS*AHTPRRPIIAVSPA
Trigger: CGCGGGAGAAACTGCAATAATTGGCCTCCTGGGAGTGTGAGCTCAGGAGCAATGTCCCTGTGTGGGACGCAGGCCTTTGCTCGGGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643191.1
CDS GCA 90 bp ATTTTCTGCTCTGCCCGCAGGCGCCGCATGCAGCCGCGGATGGCTTaGAAGCTGTCGGACTCCAGGTTGGAGCTCGTGGAAGGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: IFCSARRRRMQPRMA*KLSDSRLELVEGSS
Trigger: TGAGCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGGCAGAGCAGAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 90 bp CCTCCTGGTGGAAGTTCCCAATGCCGCTGTCACTGTTGCTGCTGGTaGTGTTGTTCTGGTGGGCATCGGCGTCCCCGTCCAGAAAGGCGC +
Preference number: 5 (lower is better)
Translates to: PPGGSSQCRCHCCCW*CCSGGHRRPRPERR
Trigger: GCGCCTTTCTGGACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp GGCAACCTCCACACTCCGCACCCTTGGGGGCGACGGCCCAGGCAATaGGCGTTTGGAGGCCTCCCCAGCTCTAAACATTCTGATGAGCTT +
Preference number: 5 (lower is better)
Translates to: GNLHTPHPWGRRPRQ*AFGGLPSSKHSDEL
Trigger: AAGCTCATCAGAATGTTTAGAGCTGGGGAGGCCTCCAAACGCCCATTGCCTGGGCCGTCGCCCCCAAGGGTGCGGAGTGTGGAGGTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp AGTGGATTTTCTGCTCTGCCCGCAGGCGCCGCATGCAGCCGCGGATaGCTTGCAAGCTGTCGGACTCCAGGTTGGAGCTCGTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: SGFSALPAGAACSRG*LASCRTPGWSSWKE
Trigger: TTCCTTCCACGAGCTCCAACCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp CCACCACGCAGGATGTCCCATCCGGGAGATGAATGCAGCAGTGCTTaGTGGCCTTGTCCTTCTCGGGTGCCAAAGTCCTGCAGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: PPRRMSHPGDECSSA*WPCPSRVPKSCRPP
Trigger: CGGAGGCCTGCAGGACTTTGGCACCCGAGAAGGACAAGGCCACCAAGCACTGCTGCATTCATCTCCCGGATGGGACATCCTGCGTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000510803.1
ENST00000513991.5
ENST00000515521.5
CDS CCA 90 bp CATGTCGGCTCGGCGGCTCATTTACAGGAGACCCGATGTGGGATATaGCACAGCGCGCTCCCAGGACACCGGATCCTGCCTGACGTGTCT +
Preference number: 5 (lower is better)
Translates to: HVGSAAHLQETRCGI*HSALPGHRILPDVS
Trigger: AGACACGTCAGGCAGGATCCGGTGTCCTGGGAGCGCGCTGTGCCATATCCCACATCGGGTCTCCTGTAAATGAGCCGCCGAGCCGACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGCTTTAGAATCCAGCTaGGGCTTCAGCCAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSEALESS*GFSQPF
Trigger: AAAAGGCTGGCTGAAGCCCAAGCTGGATTCTAAAGC...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCAACATCAAATCGAGTaGCGGCCGACTCTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPQHQIE*RPTLKG
Trigger: CCCTTTCAGAGTCGGCCGCAACTCGATTTGATGTTG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp AGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACGCCACGACTCCAGCCTaGTCAGTGCTCAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: RTGLCLGALSCYEHSGLHATTPA*SVLSCT
Trigger: TGTGCAGCTGAGCACTGACAAGGCTGGAGTCGTGGC...GTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCCGCCGAGCAATGCCTaGGTGGATCTTGTGATTAAA +
Preference number: 5 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAAPPSNA*VDLVIK
Trigger: TTTAATCACAAGATCCACCAAGGCATTGCTCGGCGG...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp CTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGACCACAAGGACCCGGTaGCTCTTCTCCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LSRLFRGRACVWEPSPAMTTRTR*LFSSWW
Trigger: CCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGGT...CATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGGGGACCAAAAATGCTTaGCATTCCAAAGGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPAGTKNA*HSKGLP
Trigger: AGGAAGGCCTTTGGAATGCAAAGCATTTTTGGTCCC...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGTTCCCCGCCCAAATTTaGAGCCCTTTTTATCTTCCT +
Preference number: 5 (lower is better)
Translates to: PGCWGPAASPGVHGPPLPFPAQI*SPFYLP
Trigger: AGGAAGATAAAAAGGGCTCAAAATTTGGGCGGGGAA...CGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp CGGCGAGGTCCAGGCTACAGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCATGGAGAAGCCCGCCTaGACAGCCACCACGCAGGAT +
Preference number: 5 (lower is better)
Translates to: RRGPGYRSDKTKPHGRPLMEKPA*TATTQD
Trigger: ATCCTGCGTGGTGGCTGTCAAGGCGGGCTTCTCCAT...GAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGACCTCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCAAGATGCTACTGTCTaGGTGCAGCACCAGAGGCTT +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPQDATV*VQHQRL
Trigger: AAGCCTCTGGTGCTGCACCAAGACAGTAGCATCTTG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS TCA 90 bp CAAACAGTGGCAGCCGGGGGCCCACTGTCCTTTCTGACTGGAAGCTaGGCAGACCACGCTTACGGGGCCAAGGTGGAGGGATCAGAACCT +
Preference number: 5 (lower is better)
Translates to: QTVAAGGPLSFLTGS*ADHAYGAKVEGSEP
Trigger: AGGTTCTGATCCCTCCACCTTGGCCCCGTAAGCGTGGTCTGCTCAGCTTCCAGTCAGAAAGGACAGTGGGCCCCCGGCTGCCACTGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS TCA 90 bp CCTACTTCCCCTTCTACAGAAACCACGGGGTCACTGGCTGCTCAGTaGGCTGCCCGAGGGCCTGGAGAGAGAAACCTCATCGCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: PTSPSTETTGSLAAQ*AARGPGERNLIAAQ
Trigger: CTGGGCAGCGATGAGGTTTCTCTCTCCAGGCCCTCGGGCAGCTCACTGAGCAGCCAGTGACCCCGTGGTTTCTGTAGAAGGGGAAGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS TCA 90 bp CCACTTAACCAAATACTTCCAACCATGCACTGCAAACCACCCCTCTaGGTCCATACCAGGGTCAGCCGGCAGAGCCCGGGCGGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: PLNQILPTMHCKPPL*VHTRVSRQSPGGPE
Trigger: CTCGGGGCCGCCCGGGCTCTGCCGGCTGACCCTGGTATGGACTCAGAGGGGTGGTTTGCAGTGCATGGTTGGAAGTATTTGGTTAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643191.1
CDS GCA 90 bp GTCGTGCATGATCTTCATGGTCACCAGCGAGTGGATTTTCTGCTCTaGCCGCAGGCGCCGCATGCAGCCGCGGATGGCTTGCAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: VVHDLHGHQRVDFLL*PQAPHAAADGLQAV
Trigger: GACAGCTTGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCACTCGCTGGTGACCATGAAGATCATGCACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 90 bp CGTGTCTGCTCGAGCTCCCACCCAGGTCCACCACAAGGACCCGGTTaGTCTTCTCCTCCTGGTGGAAGTTCCCAATGCCGCTGTCACTGT +
Preference number: 5 (lower is better)
Translates to: RVCSSSHPGPPQGPG*SSPPGGSSQCRCHC
Trigger: ACAGTGACAGCGGCATTGGGAACTTCCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGGTGGACCTGGGTGGGAGCTCGAGCAGACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 90 bp CTGGACAAACCCGTGTTTGATCTGATCCCTGGGCAGGCACTCTGCTaGTATCTAGGCAGGAACCCCTTCCTGCGGGGACCTCCCAGACGG +
Preference number: 5 (lower is better)
Translates to: LDKPVFDLIPGQALC*YLGRNPFLRGPPRR
Trigger: CCGTCTGGGAGGTCCCCGCAGGAAGGGGTTCCTGCCTAGATAGCAGCAGAGTGCCTGCCCAGGGATCAGATCAAACACGGGTTTGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508158.5
CDS GCA 90 bp CACAGATCCTGCTCGGTAGTCTCTGCAGAGCACAGACCGCTCCGCTaGTCCTGGGCCCTTCCCTACTCACAGAGAAGTAGCGGACACCGA +
Preference number: 5 (lower is better)
Translates to: HRSCSVVSAEHRPLR*SWALPYSQRSSGHR
Trigger: TCGGTGTCCGCTACTTCTCTGTGAGTAGGGAAGGGCCCAGGAGCAGCGGAGCGGTCTGTGCTCTGCAGAGACTACCGAGCAGGATCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS GCA 90 bp ACAGAACAGCCTCATCTTCGCCAGCGTTCAGCATGGGCATCTCCATaGCCTCTGCCCTGCCACCTGCCAAAACCACCCGGCTGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: TEQPHLRQRSAWASP*PLPCHLPKPPGWCL
Trigger: CAGACACCAGCCGGGTGGTTTTGGCAGGTGGCAGGGCAGAGGGCATGGAGATGCCCATGCTGAACGCTGGCGAAGATGAGGCTGTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CCA 90 bp GCCGCATGCAGCCGCGGATGGCTTGCAAGCTGTCGGACTCCAGGTTaGAGCTCGTGGAAGGAAGCTCAATGGAGCCTAAGTAGCCCACGA +
Preference number: 5 (lower is better)
Translates to: AACSRGWLASCRTPG*SSWKEAQWSLSSPR
Trigger: TCGTGGGCTACTTAGGCTCCATTGAGCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp CTCAGCTGCACACAGTCGTGCATGATCTTCATGGTCACCAGCGAGTaGATTTTCTGCTCTGCCCGCAGGCGCCGCATGCAGCCGCGGATG +
Preference number: 5 (lower is better)
Translates to: LSCTQSCMIFMVTSE*IFCSARRRRMQPRM
Trigger: CATCCGCGGCTGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCACTCGCTGGTGACCATGAAGATCATGCACGACTGTGTGCAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp CTCCCACCCAGGTCCACCACAAGGACCCGGTTGCTCTTCTCCTCCTaGTGGAAGTTCCCAATGCCGCTGTCACTGTTGCTGCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: LPPRSTTRTRLLFSS*WKFPMPLSLLLLVL
Trigger: CAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGGTGGACCTGGGTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp CCACGCAGGATGTCCCATCCGGGAGATGAATGCAGCAGTGCTTGGTaGCCTTGTCCTTCTCGGGTGCCAAAGTCCTGCAGGCCTCCGACA +
Preference number: 5 (lower is better)
Translates to: PRRMSHPGDECSSAW*PCPSRVPKSCRPPT
Trigger: TGTCGGAGGCCTGCAGGACTTTGGCACCCGAGAAGGACAAGGCCACCAAGCACTGCTGCATTCATCTCCCGGATGGGACATCCTGCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000510803.1
ENST00000513991.5
ENST00000515521.5
CDS CCA 90 bp CAGAGGACACAGAGCCCTGCGACTCTCGGCGACACAGGCCTCCATTaGCATGCAGGGCGTCTTGACAGGGGAAACACAGTGACTCACGTC +
Preference number: 5 (lower is better)
Translates to: QRTQSPATLGDTGLH*HAGRLDRGNTVTHV
Trigger: GACGTGAGTCACTGTGTTTCCCCTGTCAAGACGCCCTGCATGCCAATGGAGGCCTGTGTCGCCGAGAGTCGCAGGGCTCTGTGTCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510803.1
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCAAGAGCACGTCTCATaGTTCCCTTGGAGCCATATT +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPQEHVS*FPWSHI
Trigger: AATATGGCTCCAAGGGAACAATGAGACGTGCTCTTG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp TCCTCTCTCCAGGGGATGGCCACGCAGGCCACGGCCCTCGGACCCCTGGAAACAGCTTTAGAATCCAGCTaGGGCTTCAGCCAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: SSLQGMATQATALGPLETALESS*GFSQPF
Trigger: AAAAGGCTGGCTGAAGCCCAAGCTGGATTCTAAAGC...TGTTTCCAGGGGTCCGAGGGCCGTGGCCTGCGTGGCCATCCCCTGGAGAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCGCTTTAGAATCCAGCTaGGGCTTCAGCCAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSALESS*GFSQPF
Trigger: AAAAGGCTGGCTGAAGCCCAAGCTGGATTCTAAAGC...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp TCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTCTTCAAGGGCTCTGAATaGCTCGCACAAAGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: SPPAANHSRGVHAPLSTLFKGSE*LAQRLG
Trigger: CCCGAGCCTTTGTGCGAGCAATTCAGAGCCCTTGAA...GAGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp TGTGTCTGGGAGCCCTCTCCTGCTATGAACACAGCGGGCTTCACTTCCTCACTCGCAGCCGCGGATGGCTaGCAAGCTGTCGGACTCCAG +
Preference number: 5 (lower is better)
Translates to: CVWEPSPAMNTAGFTSSLAAADG*QAVGLQ
Trigger: CTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGC...GAGTGAGGAAGTGAAGCCCGCTGTGTTCATAGCAGGAGAGGGCTCCCAGACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTCCGCCGAGCAATGCCTaGGTGGATCTTGTGATTAAA +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPPPSNA*VDLVIK
Trigger: TTTAATCACAAGATCCACCAAGGCATTGCTCGGCGG...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCTTCCCCGCCCAAATTTaGAGCCCTTTTTATCTTCCT +
Preference number: 5 (lower is better)
Translates to: GQGAPWPAWRMSGASASSFPAQI*SPFYLP
Trigger: AGGAAGATAAAAAGGGCTCAAAATTTGGGCGGGGAA...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTTCCCCGCCCAAATTTaGAGCCCTTTTTATCTTCCT +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPAFPAQI*SPFYLP
Trigger: AGGAAGATAAAAAGGGCTCAAAATTTGGGCGGGGAA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp AGCCGGGCTGCTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCTCAAACTTCATGAGATaGAAGATCTGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SRAAGDLLRVRECTALHFSNFMR*KICSCC
Trigger: GCAGCAGCTGCAGATCTTCAATCTCATGAAGTTTGA...GAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAGCAGCCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTTCCACTTAACTTTTTaGGCGTGGACACACTGGAGT +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPAFHLTF*AWTHWS
Trigger: ACTCCAGTGTGTCCACGCCAAAAAAGTTAAGTGGAA...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CGGCGAGGTCCAGGCTACAGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCCAGTGCTTGGTGGCCTaGTCCTTCTCGGGTGCCAAA +
Preference number: 5 (lower is better)
Translates to: RRGPGYRSDKTKPHGRPLQCLVA*SFSGAK
Trigger: TTTGGCACCCGAGAAGGACAAGGCCACCAAGCACTG...GAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGACCTCGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp GTCCAGGCTACAGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGACCTCCGTGACGGGCTaGGTGGGCTTGGCCTTGAGT +
Preference number: 5 (lower is better)
Translates to: VQATGLTRPNLTAGLSLLTSVTG*VGLALS
Trigger: ACTCAAGGCCAAGCCCACCAAGCCCGTCACGGAGGT...CAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp GGGTGGAGGCTGCAGAGTGGCACCGGTGGGCATGCCAGGCACCTCAGGCTTTCTAATCCCCTGCTTCCTTaGAGAAATGCCCGTGACACC +
Preference number: 5 (lower is better)
Translates to: GWRLQSGTGGHARHLRLSNPLLP*RNARDT
Trigger: GGTGTCACGGGCATTTCTCAAAGGAAGCAGGGGATT...AGAAAGCCTGAGGTGCCTGGCATGCCCACCGGTGCCACTCTGCAGCCTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS TCA 90 bp GCATGCCCTCAATCAGCTCACCCATGTCTCGGTACAGGACAGAGATaGACTGCAGGACGGGGAGGGAGGACGCCGGGAATTCCAGACAGC +
Preference number: 5 (lower is better)
Translates to: ACPQSAHPCLGTGQR*TAGRGGRTPGIPDS
Trigger: GCTGTCTGGAATTCCCGGCGTCCTCCCTCCCCGTCCTGCAGTTCATCTCTGTCCTGTACCGAGACATGGGTGAGCTGATTGAGGGCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS TCA 90 bp ATCTCCCAAATGATCTCCGAGCAGACGTGCGTTGAGAAGGCTGAGTaGGTCCAGTTCCCCGCCCAAATTTTGAGCCCGGGCCGCGCCGCT +
Preference number: 5 (lower is better)
Translates to: ISQMISEQTCVEKAE*VQFPAQILSPGRAA
Trigger: AGCGGCGCGGCCCGGGCTCAAAATTTGGGCGGGGAACTGGACTCACTCAGCCTTCTCAACGCACGTCTGCTCGGAGATCATTTGGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506631.5
CDS GCA 90 bp ACACAGTCGTGCATGATCTTCATGGTCACCAGCGAGTGGATTTTCTaGTCTGCCCGCAGGCGCCGCATGCAGCCGCGGATGGCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: TQSCMIFMVTSEWIF*SARRRRMQPRMACK
Trigger: CTTGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCACTCGCTGGTGACCATGAAGATCATGCACGACTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 90 bp TGCTCTTCTCCTCCTGGTGGAAGTTCCCAATGCCGCTGTCACTGTTaGTGCTGGTGCTGTTGTTCTGGTGGGCATCGGCGTCCCCGTCCA +
Preference number: 5 (lower is better)
Translates to: CSSPPGGSSQCRCHC*CWCCCSGGHRRPRP
Trigger: TGGACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACCAGGAGGAGAAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 90 bp AGGCTGGACAAACCCGTGTTTGATCTGATCCCTGGGCAGGCACTCTaGTGCTATCTAGGCAGGAACCCCTTCCTGCGGGGACCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: RLDKPVFDLIPGQAL*CYLGRNPFLRGPPR
Trigger: TCTGGGAGGTCCCCGCAGGAAGGGGTTCCTGCCTAGATAGCAGCAGAGTGCCTGCCCAGGGATCAGATCAAACACGGGTTTGTCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508158.5
CDS GCA 90 bp CCCGTCAACTCGCCATCAGACACAGTTGCAGACAGGGGACACGGATaGCAGGAAGTGAGAGGGGGTGAGCAGAATGGAGCTCCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: PVNSPSDTVADRGHG*QEVRGGEQNGAPEA
Trigger: AGCCTCTGGAGCTCCATTCTGCTCACCCCCTCTCACTTCCTGGCATCCGTGTCCCCTGTCTGCAACTGTGTCTGATGGCGAGTTGACGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508158.5
CDS GCA 90 bp ATTCATTCAGAGAAGCTTCCTCGACCCGCCAACAGGGCCTCTCACTaGACACATGGCCCAAGGTCACCGCCAACCACCAGAGCGACGCCA +
Preference number: 5 (lower is better)
Translates to: IHSEKLPRPANRASH*THGPRSPPTTRATP
Trigger: TGGCGTCGCTCTGGTGGTTGGCGGTGACCTTGGGCCATGTGTGCAGTGAGAGGCCCTGTTGGCGGGTCGAGGAAGCTTCTCTGAATGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506631.5
ENST00000506998.5
ENST00000512266.5
CDS GCA 90 bp TTCCCCTTCTACAGAAACCACGGGGTCACTGGCTGCTCAGTGAGCTaGCCGAGGGCCTGGAGAGAGAAACCTCATCGCTGCCCAGCACTT +
Preference number: 5 (lower is better)
Translates to: FPFYRNHGVTGCSVS*PRAWREKPHRCPAL
Trigger: AAGTGCTGGGCAGCGATGAGGTTTCTCTCTCCAGGCCCTCGGGCAGCTCACTGAGCAGCCAGTGACCCCGTGGTTTCTGTAGAAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS GCA 90 bp GGCACGAGGCTCACCTTCCGGATGCGAAGCCCACACACCCGTGACTaGACACTGCTCTGCATGTGGGCTCCTTCTCAACACGAAACTCTC +
Preference number: 5 (lower is better)
Translates to: GTRLTFRMRSPHTRD*TLLCMWAPSQHETL
Trigger: GAGAGTTTCGTGTTGAGAAGGAGCCCACATGCAGAGCAGTGTGCAGTCACGGGTGTGTGGGCTTCGCATCCGGAAGGTGAGCCTCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS CCA 90 bp TCTCCTCCTGGTGGAAGTTCCCAATGCCGCTGTCACTGTTGCTGCTaGTGCTGTTGTTCTGGTGGGCATCGGCGTCCCCGTCCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: SPPGGSSQCRCHCCC*CCCSGGHRRPRPER
Trigger: CCTTTCTGGACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACCAGGAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp ACACAAGGGGCAGACTCTGGGAGGTTCTCAGAGGCACTCTCCAGGTaGAGGTGTCCCGGGAAAGCCAGACGGCCCAATGAGTCAAGAGTC +
Preference number: 5 (lower is better)
Translates to: TQGADSGRFSEALSR*RCPGKARRPNESRV
Trigger: GACTCTTGACTCATTGGGCCGTCTGGCTTTCCCGGGACACCTCCACCTGGAGAGTGCCTCTGAGAACCTCCCAGAGTCTGCCCCTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS CCA 90 bp GGGCGCCGAGCCAGTTACAAGATCCACATCGATGATTCTGTTGACTaGGAGGTCTCGGCTGCCATGGGTCCCACTTCCGTAGCCGAGTGG +
Preference number: 5 (lower is better)
Translates to: GRRASYKIHIDDSVD*EVSAAMGPTSVAEW
Trigger: CCACTCGGCTACGGAAGTGGGACCCATGGCAGCCGAGACCTCCCAGTCAACAGAATCATCGATGTGGATCTTGTAACTGGCTCGGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509772.1
CDS CCA 90 bp TCAGCACCTGGTACAGAACAGCCTCATCTTCGCCAGCGTTCAGCATaGGCATCTCCATGCCCTCTGCCCTGCCACCTGCCAAAACCACCC +
Preference number: 5 (lower is better)
Translates to: SAPGTEQPHLRQRSA*ASPCPLPCHLPKPP
Trigger: GGGTGGTTTTGGCAGGTGGCAGGGCAGAGGGCATGGAGATGCCCATGCTGAACGCTGGCGAAGATGAGGCTGTTCTGTACCAGGTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTCGTCTCATTGTTCCCTaGGAGCCATATTTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPRLIVP*EPYFKE
Trigger: TTCCTTGAAATATGGCTCCAAGGGAACAATGAGACG...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCGTCTCATTGTTCCCTaGGAGCCATATTTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGRLIVP*EPYFKE
Trigger: TTCCTTGAAATATGGCTCCAAGGGAACAATGAGACG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CTCAAAGGACACGGCCCAGCTGGCGACCCTCCTCTCACGCAGGCGCCGGCAGCTCGTCTCATTGTTCCCTaGGAGCCATATTTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: LKGHGPAGDPPLTQAPAARLIVP*EPYFKE
Trigger: TTCCTTGAAATATGGCTCCAAGGGAACAATGAGACG...AGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCCAGCTGGGCCGTGTCCTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GGCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGTGATACTGAATCTCTaGGATCTCCCAAATGATCTC +
Preference number: 5 (lower is better)
Translates to: GQGAPWPAWRMSGASASSVILNL*DLPNDL
Trigger: GAGATCATTTGGGAGATCCAAGAGATTCAGTATCAC...GCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCAAACTTCATGAGATaGAAGATCTGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: REPHGQHGECPGPVPPARSNFMR*KICSCC
Trigger: GCAGCAGCTGCAGATCTTCAATCTCATGAAGTTTGA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGTCAAACTTCATGAGATaGAAGATCTGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QGAPWPAWRMSGASASSESNFMR*KICSCC
Trigger: GCAGCAGCTGCAGATCTTCAATCTCATGAAGTTTGA...CTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTTCCACTTAACTTTTTaGGCGTGGACACACTGGAGT +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGFHLTF*AWTHWS
Trigger: ACTCCAGTGTGTCCACGCCAAAAAAGTTAAGTGGAA...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS TCA 90 bp CAGCACCTCCGTGACGGGCTTGGTGGGCTTGGCCTTGAGTCCCACTaGCCGGTTAATCGGAACAAGATCCAGCCGAAACAAGGTGCGCTT +
Preference number: 5 (lower is better)
Translates to: QHLRDGLGGLGLESH*PVNRNKIQPKQGAL
Trigger: AAGCGCACCTTGTTTCGGCTGGATCTTGTTCCGATTAACCGGTCAGTGGGACTCAAGGCCAAGCCCACCAAGCCCGTCACGGAGGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000504559.1
ENST00000507041.5
ENST00000507246.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS TCA 90 bp ATGTGGGATATGGCACAGCGCGCTCCCAGGACACCGGATCCTGCCTaGCGTGTCTGCAAAACGGCCCTCAGTAGCCTTTGGTTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: MWDMAQRAPRTPDPA*RVCKTALSSLWFPV
Trigger: TACTGGGAACCAAAGGCTACTGAGGGCCGTTTTGCAGACACGTCAGGCAGGATCCGGTGTCCTGGGAGCGCGCTGTGCCATATCCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS GCA 90 bp TCGGCCGGGTACTCGGCCACGACTCCAGCCTTGTCAGTGCTCAGCTaGACACAGTCGTGCATGATCTTCATGGTCACCAGCGAGTGGATT +
Preference number: 5 (lower is better)
Translates to: SAGYSATTPALSVLS*TQSCMIFMVTSEWI
Trigger: AATCCACTCGCTGGTGACCATGAAGATCATGCACGACTGTGTGCAGCTGAGCACTGACAAGGCTGGAGTCGTGGCCGAGTACCCGGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 90 bp AGGACGCCGGGAATTCCAGACAGCCATTGGTGTCTGGGTCGGCCGTaGACTCAAACCCAAACCGCCGAGCAATGCCTTGGTGGATCTTGT +
Preference number: 5 (lower is better)
Translates to: RTPGIPDSHWCLGRP*TQTQTAEQCLGGSC
Trigger: ACAAGATCCACCAAGGCATTGCTCGGCGGTTTGGGTTTGAGTGCACGGCCGACCCAGACACCAATGGCTGTCTGGAATTCCCGGCGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 90 bp CCCTCAATCAGCTCACCCATGTCTCGGTACAGGACAGAGATGAACTaGAGGACGGGGAGGGAGGACGCCGGGAATTCCAGACAGCCATTG +
Preference number: 5 (lower is better)
Translates to: PSISSPMSRYRTEMN*RTGREDAGNSRQPL
Trigger: CAATGGCTGTCTGGAATTCCCGGCGTCCTCCCTCCCCGTCCTGCAGTTCATCTCTGTCCTGTACCGAGACATGGGTGAGCTGATTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 90 bp TCTTCTCCTCCTGGTGGAAGTTCCCAATGCCGCTGTCACTGTTGCTaGTGGTGCTGTTGTTCTGGTGGGCATCGGCGTCCCCGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: SSPPGGSSQCRCHCC*WCCCSGGHRRPRPE
Trigger: TTCTGGACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACCAGGAGGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 90 bp GGCTCACCTTCCGGATGCGAAGCCCACACACCCGTGACTGCACACTaGTCTGCATGTGGGCTCCTTCTCAACACGAAACTCTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: GSPSGCEAHTPVTAH*SACGLLLNTKLSGT
Trigger: TGTGCCTGAGAGTTTCGTGTTGAGAAGGAGCCCACATGCAGAGCAGTGTGCAGTCACGGGTGTGTGGGCTTCGCATCCGGAAGGTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS CCA 90 bp AGCCGCGGATGGCTTGCAAGCTGTCGGACTCCAGGTTGGAGCTCGTaGAAGGAAGCTCAATGGAGCCTAAGTAGCCCACGATCATCGCCA +
Preference number: 5 (lower is better)
Translates to: SRGWLASCRTPGWSS*KEAQWSLSSPRSSP
Trigger: TGGCGATGATCGTGGGCTACTTAGGCTCCATTGAGCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp GGGCGCCGAGCCAGTTACAAGATCCACATCGATGATTCTGTTGACTaGGAGGTCTCGGCTGCCATGGGTCCCACTTCCTGGTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: GRRASYKIHIDDSVD*EVSAAMGPTSWSGR
Trigger: CCTTCCAGACCAGGAAGTGGGACCCATGGCAGCCGAGACCTCCCAGTCAACAGAATCATCGATGTGGATCTTGTAACTGGCTCGGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000504194.5
CDS CCA 90 bp CGGATGCGAAGCCCACACACCCGTGACTGCACACTGCTCTGCATGTaGGCTCCTTCTCAACACGAAACTCTCAGGCACAGTGTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: RMRSPHTRDCTLLCM*APSQHETLRHSVQS
Trigger: GCTCTGGACACTGTGCCTGAGAGTTTCGTGTTGAGAAGGAGCCCACATGCAGAGCAGTGTGCAGTCACGGGTGTGTGGGCTTCGCATCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTGTGATACTGAATCTCTaGGATCTCCCAAATGATCTC +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPVILNL*DLPNDL
Trigger: GAGATCATTTGGGAGATCCAAGAGATTCAGTATCAC...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTCAAACTTCATGAGATaGAAGATCTGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPSNFMR*KICSCC
Trigger: GCAGCAGCTGCAGATCTTCAATCTCATGAAGTTTGA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS-3UTR CAA 90 bp CATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTTTCCACTTAACTTTTTaGGCGTGGACACACTGGAGT +
Preference number: 5 (lower is better)
Translates to: HGQHGECPGPVPPARSPPFHLTF*AWTHWS
Trigger: ACTCCAGTGTGTCCACGCCAAAAAAGTTAAGTGGAA...AGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
CDS TCA 90 bp CACAGTTGCAGACAGGGGACACGGATGCCAGGAAGTGAGAGGGGGTaGGCAGAATGGAGCTCCAGAGGCTGGACAAACCCGTGTTTGATC +
Preference number: 5 (lower is better)
Translates to: HSCRQGTRMPGSERG*AEWSSRGWTNPCLI
Trigger: GATCAAACACGGGTTTGTCCAGCCTCTGGAGCTCCATTCTGCTCACCCCCTCTCACTTCCTGGCATCCGTGTCCCCTGTCTGCAACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508158.5
CDS GCA 90 bp CCACAAGGACCCGGTTGCTCTTCTCCTCCTGGTGGAAGTTCCCAATaGCGCTGTCACTGTTGCTGCTGGTGCTGTTGTTCTGGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: PQGPGCSSPPGGSSQ*RCHCCCWCCCSGGH
Trigger: ATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 90 bp GAAACAAGGTGCGCTTTTCTAGGCGCAGGTCCCTTGACTCCAAGATaGTACTGTCTTGGTGCAGCACCAGAGGCTTGTCCCCGCCCACCA +
Preference number: 5 (lower is better)
Translates to: ETRCAFLGAGPLTPR*YCLGAAPEACPRPP
Trigger: TGGTGGGCGGGGACAAGCCTCTGGTGCTGCACCAAGACAGTAGCATCTTGGAGTCAAGGGACCTGCGCCTAGAAAAGCGCACCTTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000507041.5
ENST00000507246.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS GCA 90 bp ACCTTCCGGATGCGAAGCCCACACACCCGTGACTGCACACTGCTCTaGATGTGGGCTCCTTCTCAACACGAAACTCTCAGGCACAGTGTC +
Preference number: 5 (lower is better)
Translates to: TFRMRSPHTRDCTLL*MWAPSQHETLRHSV
Trigger: GACACTGTGCCTGAGAGTTTCGTGTTGAGAAGGAGCCCACATGCAGAGCAGTGTGCAGTCACGGGTGTGTGGGCTTCGCATCCGGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS GCA 90 bp AGGTGGCCTCCGACAAAGGTGAACTCTGCAACTCTCAGCTGCCTTTaGTCGGAGAAGAGCACCTCACAGCATGGCCAGAAGCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: RWPPTKVNSATLSCL*SEKSTSQHGQKLRA
Trigger: AGCCCTGAGCTTCTGGCCATGCTGTGAGGTGCTCTTCTCCGAGCAAAGGCAGCTGAGAGTTGCAGAGTTCACCTTTGTCGGAGGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS GCA 90 bp TCTCCCAGGTGGCCTCCGACAAAGGTGAACTCTGCAACTCTCAGCTaGCTTTGCTCGGAGAAGAGCACCTCACAGCATGGCCAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: SPRWPPTKVNSATLS*LCSEKSTSQHGQKL
Trigger: GAGCTTCTGGCCATGCTGTGAGGTGCTCTTCTCCGAGCAAAGGCAGCTGAGAGTTGCAGAGTTCACCTTTGTCGGAGGCCACCTGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS-3UTR CAA 90 bp AGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTTCACGTTGATTTCATaGACAGCAAGTATCTGGTCT +
Preference number: 5 (lower is better)
Translates to: REPHGQHGECPGPVPPARFTLIS*TASIWS
Trigger: AGACCAGATACTTGCTGTCAATGAAATCAACGTGAA...CCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTTTCACGTTGATTTCATaGACAGCAAGTATCTGGTCT +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPFTLIS*TASIWS
Trigger: AGACCAGATACTTGCTGTCAATGAAATCAACGTGAA...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CTGGGGACCTGCTGCGAGTCCGGGAGTGCACGGCCCTCCACTTCCGCCAGGATGTTCACGTTGATTTCATaGACAGCAAGTATCTGGTCT +
Preference number: 5 (lower is better)
Translates to: LGTCCESGSARPSTSARMFTLIS*TASIWS
Trigger: AGACCAGATACTTGCTGTCAATGAAATCAACGTGAA...CATCCTGGCGGAAGTGGAGGGCCGTGCACTCCCGGACTCGCAGCAGGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GCCAGGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGCCACGTTTAAAATACTaGCATCCAATGCAAAATCGT +
Preference number: 5 (lower is better)
Translates to: AREPHGQHGECPGPVPPAPRLKY*HPMQNR
Trigger: ACGATTTTGCATTGGATGCAAGTATTTTAAACGTGG...CGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp AGTAGCGGACACCGACGGGGTCCTGCAGCAGGCGCTCAAAGGACACGGCCCAGCGTGATACTGAATCTCTaGGATCTCCCAAATGATCTC +
Preference number: 5 (lower is better)
Translates to: SSGHRRGPAAGAQRTRPSVILNL*DLPNDL
Trigger: GAGATCATTTGGGAGATCCAAGAGATTCAGTATCAC...GCTGGGCCGTGTCCTTTGAGCGCCTGCTGCAGGACCCCGTCGGTGTCCGCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp CCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCACCCCCTGCCCTAAACATGGGTTTCGTTaGACAACTCTTTCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: PAWRMSGASASSEVTPCPKHGFR*TTLSPN
Trigger: ATTTGGGGAAAGAGTTGTCAAACGAAACCCATGTTT...AGGGCAGGGGGTGACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS-3UTR CAA 90 bp AACCAGCAGGTGAGGAGGGGGTCACGGAGACCACCAGCAAACAGTGGCAGCCGGGATCGCTGTCCAGATTaGGAAAGGAATGCCTCCATT +
Preference number: 5 (lower is better)
Translates to: NQQVRRGSRRPPANSGSRDRCPD*ERNASI
Trigger: AATGGAGGCATTCCTTTCCAAATCTGGACAGCGATC...CCGGCTGCCACTGTTTGCTGGTGGTCTCCGTGACCCCCTCCTCACCTGCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS TCA 90 bp CCACGACTCCAGCCTTGTCAGTGCTCAGCTGCACACAGTCGTGCATaGTCTTCATGGTCACCAGCGAGTGGATTTTCTGCTCTGCCCGCA +
Preference number: 5 (lower is better)
Translates to: PRLQPCQCSAAHSRA*SSWSPASGFSALPA
Trigger: TGCGGGCAGAGCAGAAAATCCACTCGCTGGTGACCATGAAGATCATGCACGACTGTGTGCAGCTGAGCACTGACAAGGCTGGAGTCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS TCA 90 bp CACCAGGGCCATGCCAGCTGGTGCTATCGCAATCACCTCACTGCCTaGTTTAAACTTGGAGACCACAGGCTAAGTGCCAGTCCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: HQGHASWCYRNHLTA*FKLGDHRLSASPLP
Trigger: AGGCAGGGGACTGGCACTTAGCCTGTGGTCTCCAAGTTTAAATCAGGCAGTGAGGTGATTGCGATAGCACCAGCTGGCATGGCCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS GCA 90 bp TCGGCCACGACTCCAGCCTTGTCAGTGCTCAGCTGCACACAGTCGTaGATGATCTTCATGGTCACCAGCGAGTGGATTTTCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SATTPALSVLSCTQS*MIFMVTSEWIFCSA
Trigger: GGCAGAGCAGAAAATCCACTCGCTGGTGACCATGAAGATCATGCACGACTGTGTGCAGCTGAGCACTGACAAGGCTGGAGTCGTGGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp AAACCGCCGAGCAATGCCTTGGTGGATCTTGTGATTAAACAAGTCTaGGTCCACCATGAACACGTGGCAGGAAGTCCGCAGGGCGCCCTC +
Preference number: 5 (lower is better)
Translates to: KPPSNALVDLVIKQV*VHHEHVAGSPQGAL
Trigger: GAGGGCGCCCTGCGGACTTCCTGCCACGTGTTCATGGTGGACCCAGACTTGTTTAATCACAAGATCCACCAAGGCATTGCTCGGCGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp TCCAGGAAACGAAAAGTCCATCTGAGGAACACAAGGGGCAGACTCTaGGAGGTTCTCAGAGGCACTCTCCAGGTGGAGGTGTCCCGGGAA +
Preference number: 5 (lower is better)
Translates to: SRKRKVHLRNTRGRL*EVLRGTLQVEVSRE
Trigger: TTCCCGGGACACCTCCACCTGGAGAGTGCCTCTGAGAACCTCCCAGAGTCTGCCCCTTGTGTTCCTCAGATGGACTTTTCGTTTCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS CCA 90 bp TGCACAGCACACCTACCACCTGCCAGTGCATTCTACACACAGGGATaGAGCAGGGAACAAAACACAGACCCCAACCTTGAGCGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: CTAHLPPASAFYTQG*SREQNTDPNLERLH
Trigger: GTGCAGCCGCTCAAGGTTGGGGTCTGTGTTTTGTTCCCTGCTCCATCCCTGTGTGTAGAATGCACTGGCAGGTGGTAGGTGTGCTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS-3UTR CAA 90 bp CTGCCACGTATCATTCCTGCAAGAGCCTCTCAGGACACCAGGATGCCTGCCCAGCAACATCAAATCGAGTaGCGGCCGACTCTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: LPRIIPARASQDTRMPAQQHQIE*RPTLKG
Trigger: CCCTTTCAGAGTCGGCCGCAACTCGATTTGATGTTG...CTGGGCAGGCATCCTGGTGTCCTGAGAGGCTCTTGCAGGAATGATACGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp GGGAGCCCCATGGCCAGCATGGCGAATGTCCGGGGCCAGTGCCTCCAGCGAGGTCCACGTTTAAAATACTaGCATCCAATGCAAAATCGT +
Preference number: 5 (lower is better)
Translates to: GSPMASMANVRGQCLQRGPRLKY*HPMQNR
Trigger: ACGATTTTGCATTGGATGCAAGTATTTTAAACGTGG...ACCTCGCTGGAGGCACTGGCCCCGGACATTCGCCATGCTGGCCATGGGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336727.7
ENST00000344733.9
CDS-3UTR CAA 90 bp CTCTCAAGGCTCTTCCGAGGACGGGCCTGTGTCTGGGAGCCCTCTCCTGCTATGGGGACCAAAAATGCTTaGCATTCCAAAGGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: LSRLFRGRACVWEPSPAMGTKNA*HSKGLP
Trigger: AGGAAGGCCTTTGGAATGCAAAGCATTTTTGGTCCC...CATAGCAGGAGAGGGCTCCCAGACACAGGCCCGTCCTCGGAAGAGCCTTGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCGGGACCAAAAATGCTTaGCATTCCAAAGGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPGTKNA*HSKGLP
Trigger: AGGAAGGCCTTTGGAATGCAAAGCATTTTTGGTCCC...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp TCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTCTTCCCCGCCCAAATTTaGAGCCCTTTTTATCTTCCT +
Preference number: 5 (lower is better)
Translates to: SPPAANHSRGVHAPLSTLFPAQI*SPFYLP
Trigger: AGGAAGATAAAAAGGGCTCAAAATTTGGGCGGGGAA...GAGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp AGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGTTGCTGCTCAGGCTGTaGTTGCTGACGCAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: RSDKTKPHGRPLTAVSILLLLRL*LLTQSF
Trigger: GAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAA...CAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS TCA 90 bp TTTCTCTGGAAGATTCTGGAGCAGCCCTGCTGCCCTCTGGCTGGCTaGCAGGTCGTGTCCCCAGACACAGCGGCATTCCTTATTCATTCA +
Preference number: 5 (lower is better)
Translates to: FLWKILEQPCCPLAG*QVVSPDTAAFLIHS
Trigger: TGAATGAATAAGGAATGCCGCTGTGTCTGGGGACACGACCTGTCAGCCAGCCAGAGGGCAGCAGGGCTGCTCCAGAATCTTCCAGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506631.5
ENST00000506998.5
ENST00000512266.5
CDS TCA 90 bp TGTTCAGCCGCCACTGTGTGGGGTAGGCCTGAGGTAGGCATGGGCTaGAATGTATTGAGCCCTTTTCTCTGGAAGATTCTGGAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: CSAATVWGRPEVGMG*NVLSPFLWKILEQP
Trigger: GGGCTGCTCCAGAATCTTCCAGAGAAAAGGGCTCAATACATTTCAGCCCATGCCTACCTCAGGCCTACCCCACACAGTGGCGGCTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506631.5
ENST00000506998.5
ENST00000512266.5
CDS TCA 90 bp AACCAGATCAGGGGAAGACACCGCTTCTTGGTGTGCCCTCTTCAGTaGACAACACAGAGGCTGCCAAAGGGAACAGACAGTGCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: NQIRGRHRFLVCPLQ*TTQRLPKGTDSACG
Trigger: ACCGCAGGCACTGTCTGTTCCCTTTGGCAGCCTCTGTGTTGTTCACTGAAGAGGGCACACCAAGAAGCGGTGTCTTCCCCTGATCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509746.5
CDS TCA 90 bp TGCGACTCTCGGCGACACAGGCCTCCATTGGCATGCAGGGCGTCTTaGCAGGGGAAACACAGTGACTCACGTCAATCAGAACCCTGTTTA +
Preference number: 5 (lower is better)
Translates to: CDSRRHRPPLACRAS*QGKHSDSRQSEPCL
Trigger: TAAACAGGGTTCTGATTGACGTGAGTCACTGTGTTTCCCCTGTCAAGACGCCCTGCATGCCAATGGAGGCCTGTGTCGCCGAGAGTCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510803.1
CDS GCA 90 bp TCCCACGCCTGGCTCTATCAAGGTTTTCAAAGCCCTTTGCAGATCTaGCAGGTATGGGGATGGGCACGAGTGGATGGACTGTCTGAAGCG +
Preference number: 5 (lower is better)
Translates to: SHAWLYQGFQSPLQI*QVWGWARVDGLSEA
Trigger: CGCTTCAGACAGTCCATCCACTCGTGCCCATCCCCATACCTGGCAGATCTGCAAAGGGCTTTGAAAACCTTGATAGAGCCAGGCGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CCA 90 bp TCTCCTCCAAGGGGGACAACCAGATCAGGGGAAGACACCGCTTCTTaGTGTGCCCTCTTCAGTGAACAACACAGAGGCTGCCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: SPPRGTTRSGEDTAS*CALFSEQHRGCQRE
Trigger: TTCCCTTTGGCAGCCTCTGTGTTGTTCACTGAAGAGGGCACACCAAGAAGCGGTGTCTTCCCCTGATCTGGTTGTCCCCCTTGGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509746.5
CDS-3UTR CAA 90 bp TATTACTCCTGGAAGAACAGACTCAAAACGCAGGTGAGAGCCACACAGGTGTCCCCAGGCAATGGGCGTTaGGAGGCCTCCCCAGCTCTA +
Preference number: 5 (lower is better)
Translates to: YYSWKNRLKTQVRATQVSPGNGR*EASPAL
Trigger: TAGAGCTGGGGAGGCCTCCAAACGCCCATTGCCTGG...GGACACCTGTGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCTTCCACTTAACTTTTTaGGCGTGGACACACTGGAGT +
Preference number: 5 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPFHLTF*AWTHWS
Trigger: ACTCCAGTGTGTCCACGCCAAAAAAGTTAAGTGGAA...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS GCA 90 bp CGCAGCAAGCTCTGTCCCCTCCAACACCCATTCAGTCAACAACTATaGACAGCACACCTACCACCTGCCAGTGCATTCTACACACAGGGA +
Preference number: 5 (lower is better)
Translates to: RSKLCPLQHPFSQQL*TAHLPPASAFYTQG
Trigger: TCCCTGTGTGTAGAATGCACTGGCAGGTGGTAGGTGTGCTGTGCATAGTTGTTGACTGAATGGGTGTTGGAGGGGACAGAGCTTGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS TCA 90 bp CAGGCCTCCATTGGCATGCAGGGCGTCTTGACAGGGGAAACACAGTaGCTCACGTCAATCAGAACCCTGTTTATTCGGTCACATCTCCCA +
Preference number: 5 (lower is better)
Translates to: QASIGMQGVLTGETQ*LTSIRTLFIRSHLP
Trigger: TGGGAGATGTGACCGAATAAACAGGGTTCTGATTGACGTGAGTCACTGTGTTTCCCCTGTCAAGACGCCCTGCATGCCAATGGAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510803.1
CDS CCA 90 bp GCTTCAGCCAGCCTTTTCCTTCATAGAGTCCCCCTTCTTCATCACTaGAACAGGATTCGAAGCGGCCGACGCCTTCAGCAATCACCATGT +
Preference number: 5 (lower is better)
Translates to: ASASLFLHRVPLLHH*NRIRSGRRLQQSPC
Trigger: ACATGGTGATTGCTGAAGGCGTCGGCCGCTTCGAATCCTGTTCCAGTGATGAAGAAGGGGGACTCTATGAAGGAAAAGGCTGGCTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp TGGCTCTATCAAGGTTTTCAAAGCCCTTTGCAGATCTGCCAGGTATaGGGATGGGCACGAGTGGATGGACTGTCTGAAGCGAACACTCCC +
Preference number: 5 (lower is better)
Translates to: WLYQGFQSPLQICQV*GWARVDGLSEANTP
Trigger: GGGAGTGTTCGCTTCAGACAGTCCATCCACTCGTGCCCATCCCCATACCTGGCAGATCTGCAAAGGGCTTTGAAAACCTTGATAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS-3UTR CAA 90 bp TCGCCCCCAGCAGCAAACCACAGCAGAGGTGTCCACGCACCCCTGAGCACACTCCCACGTTTAAAATACTaGCATCCAATGCAAAATCGT +
Preference number: 5 (lower is better)
Translates to: SPPAANHSRGVHAPLSTLPRLKY*HPMQNR
Trigger: ACGATTTTGCATTGGATGCAAGTATTTTAAACGTGG...GAGTGTGCTCAGGGGTGCGTGGACACCTCTGCTGTGGTTTGCTGCTGGGGGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp TTTCTCATCCAGGCGTGTCCTGGCTGTGAAAGGGACCAGGTAGCCCCTCCCATGTTCCACTTAACTTTTTaGGCGTGGACACACTGGAGT +
Preference number: 5 (lower is better)
Translates to: FLIQACPGCERDQVAPPMFHLTF*AWTHWS
Trigger: ACTCCAGTGTGTCCACGCCAAAAAAGTTAAGTGGAA...CATGGGAGGGGCTACCTGGTCCCTTTCACAGCCAGGACACGCCTGGATGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS GCA 90 bp TTCAGGTCGGCGCCCGTCAACTCGCCATCAGACACAGTTGCAGACTaGTGGTCATTAGAAACATGGGTTTCGTTTGACAACTCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: FRSAPVNSPSDTVAD*WSLETWVSFDNSFP
Trigger: GGGGAAAGAGTTGTCAAACGAAACCCATGTTTCTAATGACCAGCAGTCTGCAACTGTGTCTGATGGCGAGTTGACGGGCGCCGACCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338806.4
ENST00000506998.5
CDS CCA 90 bp GCAAGCTGTCGGACTCCAGGTTGGAGCTCGTGGAAGGAAGCTCAATaGAGCCTAAGTAGCCCACGATCATCGCCACGTTTAAAATACTTG +
Preference number: 5 (lower is better)
Translates to: ASCRTPGWSSWKEAQ*SLSSPRSSPRLKYL
Trigger: CAAGTATTTTAAACGTGGCGATGATCGTGGGCTACTTAGGCTCCATTGAGCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACAGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 90 bp TATCAAGGTTTTCAAAGCCCTTTGCAGATCTGCCAGGTATGGGGATaGGCACGAGTGGATGGACTGTCTGAAGCGAACACTCCCATCTCC +
Preference number: 5 (lower is better)
Translates to: YQGFQSPLQICQVWG*ARVDGLSEANTPIS
Trigger: GGAGATGGGAGTGTTCGCTTCAGACAGTCCATCCACTCGTGCCCATCCCCATACCTGGCAGATCTGCAAAGGGCTTTGAAAACCTTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS-3UTR CAA 90 bp AGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGCGTCTCATTGTTCCCTaGGAGCCATATTTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: RSDKTKPHGRPLTAVSILRLIVP*EPYFKE
Trigger: TTCCTTGAAATATGGCTCCAAGGGAACAATGAGACG...CAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp CTGGCATTGCTGCTCAGGCTGTTGTTGCTGACGCAGTCCTTCAGGTCGGCGCCCCCACGTTTAAAATACTaGCATCCAATGCAAAATCGT +
Preference number: 5 (lower is better)
Translates to: LALLLRLLLLTQSFRSAPPRLKY*HPMQNR
Trigger: ACGATTTTGCATTGGATGCAAGTATTTTAAACGTGG...GGGCGCCGACCTGAAGGACTGCGTCAGCAACAACAGCCTGAGCAGCAATGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514268.5
CDS-3UTR CAA 90 bp GTCCAGGCTACAGGTCTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGGTGATACTGAATCTCTaGGATCTCCCAAATGATCTC +
Preference number: 5 (lower is better)
Translates to: VQATGLTRPNLTAGLSLLVILNL*DLPNDL
Trigger: GAGATCATTTGGGAGATCCAAGAGATTCAGTATCAC...CAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAGACCTGTAGCCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS TCA 90 bp CACCCGGGTCTAAGACACACCATTCAACACCGCAGCTTGTGCGTGTaGGAAAAGTTTAAAGGCATTTCCGATGAAGTTCCCTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: HPGLRHTIQHRSLCV*EKFKGISDEVPSRS
Trigger: GGAGCGAGAGGGAACTTCATCGGAAATGCCTTTAAACTTTTCTCACACGCACAAGCTGCGGTGTTGAATGGTGTGTCTTAGACCCGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS GCA 90 bp CCAACACCCATTCAGTCAACAACTATGCACAGCACACCTACCACCTaGCAGTGCATTCTACACACAGGGATGGAGCAGGGAACAAAACAC +
Preference number: 5 (lower is better)
Translates to: PTPIQSTTMHSTPTT*QCILHTGMEQGTKH
Trigger: GTGTTTTGTTCCCTGCTCCATCCCTGTGTGTAGAATGCACTGGCAGGTGGTAGGTGTGCTGTGCATAGTTGTTGACTGAATGGGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS-3UTR CAA 90 bp CTGACAAGACCAAACCTCACGGCAGGCCTCTCACTGCTGTCAGCATCCTGGACCTTCACGTTGATTTCATaGACAGCAAGTATCTGGTCT +
Preference number: 5 (lower is better)
Translates to: LTRPNLTAGLSLLSASWTFTLIS*TASIWS
Trigger: AGACCAGATACTTGCTGTCAATGAAATCAACGTGAA...GGTCCAGGATGCTGACAGCAGTGAGAGGCCTGCCGTGAGGTTTGGTCTTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS TCA 90 bp ATCATCAAGGGAGCGAGTGATACTGAATCTCTTGGATCTCCCAAATaGTCTCCGAGCAGACGTGCGTTGAGAAGGCTGAGTGAGTCCAGT +
Preference number: 5 (lower is better)
Translates to: IIKGASDTESLGSPK*SPSRRALRRLSESS
Trigger: ACTGGACTCACTCAGCCTTCTCAACGCACGTCTGCTCGGAGATCATTTGGGAGATCCAAGAGATTCAGTATCACTCGCTCCCTTGATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000506631.5
ENST00000511805.5
ENST00000513784.7
ENST00000514268.5
CDS GCA 90 bp CCCTTCGTAACCCATGGCAACAGGACACTGCAGGAAGCTGTGGCTTaGCAGGGTTTCAGACTCTATCTCAATTGTCTCATCCAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: PFVTHGNRTLQEAVA*QGFRLYLNCLIQRK
Trigger: CTTTCTTTGGATGAGACAATTGAGATAGAGTCTGAAACCCTGGCAAGCCACAGCTTCCTGCAGTGTCCTGTTGCCATGGGTTACGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS-3UTR CAA 90 bp AGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGATTTGGAAAGGAATGGCCTGGCTGTCGATGTaGACCGGGGTGGTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: SLETETLKTIAVQIWKGMAWLSM*TGVVAL
Trigger: CAAAGCCACCACCCCGGTCAACATCGACAGCCAGGC...CATTCCTTTCCAAATCTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp AAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCCTCCATTTTCGGAAACCCCCTAGGCGCAGGTCCCTaGACTCCAAGATGCTACTGT +
Preference number: 5 (lower is better)
Translates to: KNDRCPDLERNASIFGNPLGAGP*TPRCYC
Trigger: ACAGTAGCATCTTGGAGTCAAGGGACCTGCGCCTAG...GGGGTTTCCGAAAATGGAGGCATTCCTTTCCAAATCTGGACAGCGATCGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp ATGCTATTGTTTTCCAGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGACGGGCTTGGTGGGCTaGGCCTTGAGTCCCACTGAC +
Preference number: 5 (lower is better)
Translates to: MLLFSSLETETLKTIAVQTGLVG*ALSPTD
Trigger: GTCAGTGGGACTCAAGGCCAAGCCCACCAAGCCCGT...CTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACTGGAAAACAATAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS TCA 90 bp CTGGAACAGGATTCGAAGCGGCCGACGCCTTCAGCAATCACCATGTaGAGGACACCAGAGCACTTCCCAATTAATTTCACTACATCTTCA +
Preference number: 5 (lower is better)
Translates to: LEQDSKRPTPSAITM*RTPEHFPINFTTSS
Trigger: TGAAGATGTAGTGAAATTAATTGGGAAGTGCTCTGGTGTCCTTCACATGGTGATTGCTGAAGGCGTCGGCCGCTTCGAATCCTGTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS-3UTR CAA 90 bp TTATTACTCCTGGAAGAACAGACTCAAAACGCAGGTGAGAGCCACACAGGTGTCCCGCCGAGCAATGCCTaGGTGGATCTTGTGATTAAA +
Preference number: 5 (lower is better)
Translates to: LLLLEEQTQNAGESHTGVPPSNA*VDLVIK
Trigger: TTTAATCACAAGATCCACCAAGGCATTGCTCGGCGG...GACACCTGTGTGGCTCTCACCTGCGTTTTGAGTCTGTTCTTCCAGGAGTAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS CCA 90 bp AACTCTTACACAGGAGCATGTGCACACAGAGCACTAAGACCATCATaGCAACAAGATGTTTCCCAAACAGGCTTGCTAGAGCGAAAGCAG +
Preference number: 5 (lower is better)
Translates to: NSYTGACAHRALRPS*QQDVSQTGLLERKQ
Trigger: CTGCTTTCGCTCTAGCAAGCCTGTTTGGGAAACATCTTGTTGCCATGATGGTCTTAGTGCTCTGTGTGCACATGCTCCTGTGTAAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513991.5
CDS-3UTR CAA 90 bp ATGCTATTGTTTTCCAGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGCCGGACAGGATGTCTTaGATGGAGAAGCCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: MLLFSSLETETLKTIAVQPDRMS*MEKPAL
Trigger: CAAGGCGGGCTTCTCCATCAAAGACATCCTGTCCGG...CTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACTGGAAAACAATAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp AGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGATTTGGAAAGGAATGTTGGTGGGCTTGGCCTaGAGTCCCACTGACCGGTTA +
Preference number: 5 (lower is better)
Translates to: SLETETLKTIAVQIWKGMLVGLA*SPTDRL
Trigger: TAACCGGTCAGTGGGACTCAAGGCCAAGCCCACCAA...CATTCCTTTCCAAATCTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp AGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCTCTTGCTAAAGCCCTaGGCCACAGCAGCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: SLETETLKTIAVQIWKGMLLLKP*ATAAGV
Trigger: CACTCCAGCTGCTGTGGCCAAGGGCTTTAGCAAGAG...CATTCCTTTCCAAATCTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS TCA 90 bp GCTCTGAATTGCTCGCACAAAGGCTCGGGTTTTCAAAAATCATATTaGAAATTCCACCAGACTGCATTTCCTCCACGACTCGCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: ALNCSHKGSGFQKSY*KFHQTAFPPRLALL
Trigger: GAGCAGAGCGAGTCGTGGAGGAAATGCAGTCTGGTGGAATTTTCAATATGATTTTTGAAAACCCGAGCCTTTGTGCGAGCAATTCAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 90 bp CACAGGGTTGAACAGGAAAAGCAACTAACCTTACACAGGAGCATGTaGACACAGAGCACTAAGACCATCATGGCAACAAGATGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: HRVEQEKQLTLHRSM*TQSTKTIMATRCFP
Trigger: TGGGAAACATCTTGTTGCCATGATGGTCTTAGTGCTCTGTGTGCACATGCTCCTGTGTAAGGTTAGTTGCTTTTCCTGTTCAACCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS-3UTR CAA 90 bp AAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCCTCCATTTTCGGAAACCCCCTCAGTTTCTGGTATTaGTGGCTCACGGAAACATCC +
Preference number: 5 (lower is better)
Translates to: KNDRCPDLERNASIFGNPLSFWY*WLTETS
Trigger: GGATGTTTCCGTGAGCCACAAATACCAGAAACTGAG...GGGGTTTCCGAAAATGGAGGCATTCCTTTCCAAATCTGGACAGCGATCGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS TCA 90 bp AGACACAGTTGCAGACTGCTGGTCATTAGAAACATGGGTTTCGTTTaGCAACTCTTTCCCCAAATTCATTGTAAGGCACCGAGCCACACT +
Preference number: 5 (lower is better)
Translates to: RHSCRLLVIRNMGFV*QLFPQIHCKAPSHT
Trigger: AGTGTGGCTCGGTGCCTTACAATGAATTTGGGGAAAGAGTTGTCAAACGAAACCCATGTTTCTAATGACCAGCAGTCTGCAACTGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338806.4
ENST00000506998.5
CDS-3UTR CAA 90 bp AAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCCTCCATTTTCGGAAACCCCTCAAACTTCATGAGATaGAAGATCTGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: KNDRCPDLERNASIFGNPSNFMR*KICSCC
Trigger: GCAGCAGCTGCAGATCTTCAATCTCATGAAGTTTGA...GGGGTTTCCGAAAATGGAGGCATTCCTTTCCAAATCTGGACAGCGATCGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS-3UTR CAA 90 bp AGTCTTGAGACAGAAACACTAAAAACGATCGCTGTCCAGATTTGGAAAGGAATGCAAGATGCTACTGTCTaGGTGCAGCACCAGAGGCTT +
Preference number: 5 (lower is better)
Translates to: SLETETLKTIAVQIWKGMQDATV*VQHQRL
Trigger: AAGCCTCTGGTGCTGCACCAAGACAGTAGCATCTTG...CATTCCTTTCCAAATCTGGACAGCGATCGTTTTTAGTGTTTCTGTCTCAAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS GCA 72 bp CCCACCACTGGCCTGCGACCTCCCAGGGCCAGCCTGTaGCCCCGCTATGCCACCATCCCGCCCGGGCGCCGA +
Preference number: 6 (lower is better)
Translates to: PTTGLRPPRASL*PRYATIPPGRR
Trigger: TCGGCGCCCGGGCGGGATGGTGGCATAGCGGGGGCACAGGCTGGCCCTGGGAGGTCGCAGGCCAGTGGTGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000504194.5
ENST00000509772.1
CDS GCA 72 bp GCTGGGCACCCCTCCCACCCACACCGTCCCACGCGCTaGCTCCGGGGCCGTGTCTGCTCGAGCTCCCACCCA +
Preference number: 6 (lower is better)
Translates to: AGHPSHPHRPTR*LRGRVCSSSHP
Trigger: TGGGTGGGAGCTCGAGCAGACACGGCCCCGGAGGCAGCGCGTGGGACGGTGTGGGTGGGAGGGGTGCCCAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp GACGGGCTGTCGCTGCTCTCCTGGACTGGCTCCCACTaGTCGCCAGGCTGGGAGGCGCTCTCCCGGCCGTTG +
Preference number: 6 (lower is better)
Translates to: DGLSLLSWTGSH*SPGWEALSRPL
Trigger: CAACGGCCGGGAGAGCGCCTCCCAGCCTGGCGAGCAGTGGGAGCCAGTCCAGGAGAGCAGCGACAGCCCGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
CDS GCA 72 bp CCTGCGACCTCCCAGGGCCAGCCTGTGCCCCCGCTATaGCACCATCCCGCCCGGGCGCCGAGCCAGTTACAA +
Preference number: 6 (lower is better)
Translates to: PATSQGQPVPPL*HHPARAPSQLQ
Trigger: TTGTAACTGGCTCGGCGCCCGGGCGGGATGGTGGCATAGCGGGGGCACAGGCTGGCCCTGGGAGGTCGCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000504194.5
ENST00000509772.1
CDS GCA 72 bp AGGTGGGGGCCGGGCGACGAGCCCATCTCCGAAGGCTaGTGGCCGGACCCAGCTTCCCCAGGGCAGGACCTT +
Preference number: 6 (lower is better)
Translates to: RWGPGDEPISEG*WPDPASPGQDL
Trigger: AAGGTCCTGCCCTGGGGAAGCTGGGTCCGGCCAGCAGCCTTCGGAGATGGGCTCGTCGCCCGGCCCCCACCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515521.5
CDS CCA 72 bp TGGGCGGTGCCCTCCTGCGCGAGGGAGACGGGGGACTaGGGAGTGCAGAAGGGCCCGCTGGGAGACTTCTGC +
Preference number: 6 (lower is better)
Translates to: WAVPSCARETGD*GVQKGPLGDFC
Trigger: GCAGAAGTCTCCCAGCGGGCCCTTCTGCACTCCCCAGTCCCCCGTCTCCCTCGCGCAGGAGGGCACCGCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
CDS CCA 72 bp TGGGGGCCGGGCGACGAGCCCATCTCCGAAGGCTGCTaGCCGGACCCAGCTTCCCCAGGGCAGGACCTTTCC +
Preference number: 6 (lower is better)
Translates to: WGPGDEPISEGC*PDPASPGQDLS
Trigger: GGAAAGGTCCTGCCCTGGGGAAGCTGGGTCCGGCCAGCAGCCTTCGGAGATGGGCTCGTCGCCCGGCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515521.5
CDS TCA 72 bp AGGCTCACCCGGGACGGGGCCCAAGCCAGGGAGGTCTaGTGTAGGAGGCCCACCACTGGCCTGCGACCTCCC +
Preference number: 6 (lower is better)
Translates to: RLTRDGAQAREV*CRRPTTGLRPP
Trigger: GGGAGGTCGCAGGCCAGTGGTGGGCCTCCTACATCAGACCTCCCTGGCTTGGGCCCCGTCCCGGGTGAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000504194.5
ENST00000509772.1
CDS CCA 72 bp CTGCTCTCCTGGACTGGCTCCCACTGCTCGCCAGGCTaGGAGGCGCTCTCCCGGCCGTTGCCTGTGGCGCTT +
Preference number: 6 (lower is better)
Translates to: LLSWTGSHCSPG*EALSRPLPVAL
Trigger: AAGCGCCACAGGCAACGGCCGGGAGAGCGCCTCCCAGCCTGGCGAGCAGTGGGAGCCAGTCCAGGAGAGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
CDS CCA 72 bp TCTAAGGAGGGCCGGCTCCTGCGCGTCAGGATGAGGTaGGGGCCGGGCGACGAGCCCATCTCCGAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: SKEGRLLRVRMR*GPGDEPISEGC
Trigger: GCAGCCTTCGGAGATGGGCTCGTCGCCCGGCCCCCACCTCATCCTGACGCGCAGGAGCCGGCCCTCCTTAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515521.5
CDS CCA 72 bp TGCCCTGCCACCTGCCAAAACCACCCGGCTGGTGTCTaGAGCTCGGCCAGGAGCCGCCAAGGGCCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: CPATCQNHPAGV*SSARSRQGPCS
Trigger: GCTGCAGGGCCCTTGGCGGCTCCTGGCCGAGCTCCAGACACCAGCCGGGTGGTTTTGGCAGGTGGCAGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS TCA 72 bp CCCCGCCCACCAGGAAGAGGTCCGCGGCCGCCCCGTTaGTGCCATGCCGCTCACAGAGTCCGGACAGGATGT +
Preference number: 6 (lower is better)
Translates to: PRPPGRGPRPPR*CHAAHRVRTGC
Trigger: ACATCCTGTCCGGACTCTGTGAGCGGCATGGCATCAACGGGGCGGCCGCGGACCTCTTCCTGGTGGGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000513991.5
ENST00000515521.5
CDS GCA 72 bp GCAGGCGGGGAGCAGCCACGCACAAATGCTTGGCACTaGAGGGCACACACAGGAGCCGCAGCCACGGAGCGC +
Preference number: 6 (lower is better)
Translates to: AGGEQPRTNAWH*RAHTGAAATER
Trigger: GCGCTCCGTGGCTGCGGCTCCTGTGTGTGCCCTGCAGTGCCAAGCATTTGTGCGTGGCTGCTCCCCGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS GCA 72 bp CAGCCGGCAGAGCCCGGGCGGCCCCGAGCAAAGGCCTaGGTCCCACACAGGGACATTGCTCCTGAGCTCACA +
Preference number: 6 (lower is better)
Translates to: QPAEPGRPRAKA*VPHRDIAPELT
Trigger: TGTGAGCTCAGGAGCAATGTCCCTGTGTGGGACGCAGGCCTTTGCTCGGGGCCGCCCGGGCTCTGCCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643191.1
CDS CCA 72 bp TGCCACTCCCGGAGCACGTGGACCGGGAGCCAGCGCTaGTTGAAACCACAGCCAGCACCCACGGTGCCCCTC +
Preference number: 6 (lower is better)
Translates to: CHSRSTWTGSQR*LKPQPAPTVPL
Trigger: GAGGGGCACCGTGGGTGCTGGCTGTGGTTTCAACCAGCGCTGGCTCCCGGTCCACGTGCTCCGGGAGTGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp CCCCCTGCAGGCGGGGAGCAGCCACGCACAAATGCTTaGCACTGCAGGGCACACACAGGAGCCGCAGCCACG +
Preference number: 6 (lower is better)
Translates to: PPAGGEQPRTNA*HCRAHTGAAAT
Trigger: CGTGGCTGCGGCTCCTGTGTGTGCCCTGCAGTGCCAAGCATTTGTGCGTGGCTGCTCCCCGCCTGCAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CAA 72 bp TCCCCGCCCACCAGGAAGAGGTCCGCGGCCGCCCCGTaGATGCCATGCCGCTCACAGAGTCCGGACAGGATG +
Preference number: 6 (lower is better)
Translates to: SPPTRKRSAAAP*MPCRSQSPDRM
Trigger: CATCCTGTCCGGACTCTGTGAGCGGCATGGCATCAACGGGGCGGCCGCGGACCTCTTCCTGGTGGGCGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000513991.5
ENST00000515521.5
CDS TCA 72 bp ACCCGAAAAATCGCCGGTCGTCCGGGCACACGGCGCTaGAGGCCAGCTTCTCGGCCGGGTACTCGGCCACGA +
Preference number: 6 (lower is better)
Translates to: TRKIAGRPGTRR*RPASRPGTRPR
Trigger: TCGTGGCCGAGTACCCGGCCGAGAAGCTGGCCTTCAGCGCCGTGTGCCCGGACGACCGGCGATTTTTCGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS TCA 72 bp GCCAGGGCCAGGGGAGCGAACGAGAAGGTGCTGCCGTaGTGGGCAACCTGGTACCTCCTGGCCACTCCCGAG +
Preference number: 6 (lower is better)
Translates to: ARARGANEKVLP*WATWYLLATPE
Trigger: CTCGGGAGTGGCCAGGAGGTACCAGGTTGCCCATCACGGCAGCACCTTCTCGTTCGCTCCCCTGGCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508158.5
CDS GCA 72 bp GGGCTGCGCGAAGCTGCCCTCCACCCTGTAGCGGTCTaGGGGGATCTTGCTCATAGGAGGGGGCAGTGTGCC +
Preference number: 6 (lower is better)
Translates to: GLREAALHPVAV*GDLAHRRGQCA
Trigger: GGCACACTGCCCCCTCCTATGAGCAAGATCCCCGCAGACCGCTACAGGGTGGAGGGCAGCTTCGCGCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp CCACTTCCTGAGACTGCCTCTTCCAGATCTGGGCGGTaGCCTCCTGCGCGAGGGAGACGGGGGACTGGGGAG +
Preference number: 6 (lower is better)
Translates to: PLPETASSRSGR*PPARGRRGTGE
Trigger: CTCCCCAGTCCCCCGTCTCCCTCGCGCAGGAGGGCACCGCCCAGATCTGGAAGAGGCAGTCTCAGGAAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
CDS GCA 72 bp GGGCTGCCAGGGCCAGGGGAGCGAACGAGAAGGTGCTaGCGTGATGGGCAACCTGGTACCTCCTGGCCACTC +
Preference number: 6 (lower is better)
Translates to: GLPGPGERTRRC*RDGQPGTSWPL
Trigger: GAGTGGCCAGGAGGTACCAGGTTGCCCATCACGGCAGCACCTTCTCGTTCGCTCCCCTGGCCCTGGCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508158.5
CDS GCA 72 bp CTAGAGCGAAAGCAGCTGGGCGCGGGGCGCCGCGTATaGCACGTGAGTTACGTCCTGACCCACGGTGCCCTC +
Preference number: 6 (lower is better)
Translates to: LERKQLGAGRRV*HVSYVLTHGAL
Trigger: GAGGGCACCGTGGGTCAGGACGTAACTCACGTGGCATACGCGGCGCCCCGCGCCCAGCTGCTTTCGCTCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS GCA 72 bp ACAGACAGTGCCTGCGGTGACGACGCCCGGGCCCCGTaGAACACTCACCAGCCTCACCAGCAGGCCACTGAG +
Preference number: 6 (lower is better)
Translates to: TDSACGDDARAP*NTHQPHQQATE
Trigger: CTCAGTGGCCTGCTGGTGAGGCTGGTGAGTGTTGCACGGGGCCCGGGCGTCGTCACCGCAGGCACTGTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509746.5
CDS CCA 72 bp TCTGCTCTGCCCGCAGGCGCCGCATGCAGCCGCGGATaGCTTGCAAGCTGTCGGACTCCAGGTTGGAGCTCG +
Preference number: 6 (lower is better)
Translates to: SALPAGAACSRG*LASCRTPGWSS
Trigger: CGAGCTCCAACCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGGCAGAGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp GCGTCGTCTGCGTGGTCCCCGTGCTCCCTCTTTTTCTaGGACCTCCCGGTGCTCCTGGTCCGCGACCACGAG +
Preference number: 6 (lower is better)
Translates to: ASSAWSPCSLFF*DLPVLLVRDHE
Trigger: CTCGTGGTCGCGGACCAGGAGCACCGGGAGGTCCCAGAAAAAGAGGGAGCACGGGGACCACGCAGACGACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000513991.5
CDS CCA 72 bp CAGAGCCCTGCGACTCTCGGCGACACAGGCCTCCATTaGCATGCAGGGCGTCGTCTGCGTGGTCCCCGTGCT +
Preference number: 6 (lower is better)
Translates to: QSPATLGDTGLH*HAGRRLRGPRA
Trigger: AGCACGGGGACCACGCAGACGACGCCCTGCATGCCAATGGAGGCCTGTGTCGCCGAGAGTCGCAGGGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000513991.5
ENST00000515521.5
CDS CCA 72 bp GGCCCAGTGACTGCTCTGCCCGCCCACAGGAGACCCTaGGACACGCAGCAAGCTCTGTCCCCTCCAACACCC +
Preference number: 6 (lower is better)
Translates to: GPVTALPAHRRP*DTQQALSPPTP
Trigger: GGGTGTTGGAGGGGACAGAGCTTGCTGCGTGTCCCAGGGTCTCCTGTGGGCGGGCAGAGCAGTCACTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CAA 72 bp CTCTGCCCGCAGGCGCCGCATGCAGCCGCGGATGGCTaGCAAGCTGTCGGACTCCAGGTTGGAGCTCGTGGA +
Preference number: 6 (lower is better)
Translates to: LCPQAPHAAADG*QAVGLQVGARG
Trigger: TCCACGAGCTCCAACCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGGCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 72 bp ACAGAGCCCTGCGACTCTCGGCGACACAGGCCTCCATaGGCATGCAGGGCGTCGTCTGCGTGGTCCCCGTGC +
Preference number: 6 (lower is better)
Translates to: TEPCDSRRHRPP*ACRASSAWSPC
Trigger: GCACGGGGACCACGCAGACGACGCCCTGCATGCCAATGGAGGCCTGTGTCGCCGAGAGTCGCAGGGCTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000513991.5
ENST00000515521.5
CDS CAA 72 bp CTGGCCACCACGGGCCGCAGCACCTCCGTGACGGGCTaGGTGGGCTTGGCCTTGAGTCCCACTGACCGGTTA +
Preference number: 6 (lower is better)
Translates to: LATTGRSTSVTG*VGLALSPTDRL
Trigger: TAACCGGTCAGTGGGACTCAAGGCCAAGCCCACCAAGCCCGTCACGGAGGTGCTGCGGCCCGTGGTGGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000504559.1
ENST00000507041.5
ENST00000507246.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS CAA 72 bp CACTGCTCGCCAGGCTGGGAGGCGCTCTCCCGGCCGTaGCCTGTGGCGCTTCTCTTGCTAAAGCCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: HCSPGWEALSRP*PVALLLLKPLA
Trigger: GGCCAAGGGCTTTAGCAAGAGAAGCGCCACAGGCAACGGCCGGGAGAGCGCCTCCCAGCCTGGCGAGCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
CDS CAA 90 bp ACTGGCTCCCACTGCTCGCCAGGCTGGGAGGCGCTCTCCCGGCCGTaGCCTGTGGCGCTTCTCTTGCTAAAGCCCTTGGCCACAGCAGCT +
Preference number: 6 (lower is better)
Translates to: TGSHCSPGWEALSRP*PVALLLLKPLATAA
Trigger: AGCTGCTGTGGCCAAGGGCTTTAGCAAGAGAAGCGCCACAGGCAACGGCCGGGAGAGCGCCTCCCAGCCTGGCGAGCAGTGGGAGCCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
CDS TCA 72 bp TCCTCCACCGTCTGGATGCCCCCGGCCTCCACTTCCTaGGACTGCCTCTTCCAGATCTGGGCGGTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: SSTVWMPPASTS*DCLFQIWAVPS
Trigger: GGAGGGCACCGCCCAGATCTGGAAGAGGCAGTCTCAGGAAGTGGAGGCCGGGGGCATCCAGACGGTGGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
CDS TCA 72 bp ACAGAGGCTGCCAAAGGGAACAGACAGTGCCTGCGGTaGCGACGCCCGGGCCCCGTGCAACACTCACCAGCC +
Preference number: 6 (lower is better)
Translates to: TEAAKGNRQCLR*RRPGPVQHSPA
Trigger: GGCTGGTGAGTGTTGCACGGGGCCCGGGCGTCGTCACCGCAGGCACTGTCTGTTCCCTTTGGCAGCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509746.5
CDS GCA 72 bp TCTGCCCGCAGGCGCCGCATGCAGCCGCGGATGGCTTaGAAGCTGTCGGACTCCAGGTTGGAGCTCGTGGAA +
Preference number: 6 (lower is better)
Translates to: SARRRRMQPRMA*KLSDSRLELVE
Trigger: TTCCACGAGCTCCAACCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp GCTTGGTGGCCTTGTCCTTCTCGGGTGCCAAAGTCCTaGAGGCCTCCGACAGGTCCAGGCTCCCCGCAGAGG +
Preference number: 6 (lower is better)
Translates to: AWWPCPSRVPKS*RPPTGPGSPQR
Trigger: CCTCTGCGGGGAGCCTGGACCTGTCGGAGGCCTGCAGGACTTTGGCACCCGAGAAGGACAAGGCCACCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000510803.1
ENST00000513991.5
ENST00000515521.5
CDS GCA 72 bp CAGGTCGGCGCCCGTCAACTCGCCATCAGACACAGTTaGAGACGGAAGGCCAGCGTGACCAGGAGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: QVGARQLAIRHS*RRKASVTRRRP
Trigger: CGGCCTCCTCCTGGTCACGCTGGCCTTCCGTCTGCAACTGTGTCTGATGGCGAGTTGACGGGCGCCGACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505570.5
CDS GCA 72 bp CAGGGTGCCGCTGTCTCTAGGGCGGCCCACAGATCCTaGTCGGTAGTCTCTGCAGAGCACAGACCGCTCCGC +
Preference number: 6 (lower is better)
Translates to: QGAAVSRAAHRS*SVVSAEHRPLR
Trigger: GCGGAGCGGTCTGTGCTCTGCAGAGACTACCGAGCAGGATCTGTGGGCCGCCCTAGAGACAGCGGCACCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS GCA 72 bp CCGCGTATGCCACGTGAGTTACGTCCTGACCCACGGTaGCCTCGGGAGCGTGCTCAGTCGAAGGGGGCACGA +
Preference number: 6 (lower is better)
Translates to: PRMPRELRPDPR*PRERAQSKGAR
Trigger: TCGTGCCCCCTTCGACTGAGCACGCTCCCGAGGGCACCGTGGGTCAGGACGTAACTCACGTGGCATACGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS CCA 72 bp CCGCTGTCACTGTTGCTGCTGGTGCTGTTGTTCTGGTaGGCATCGGCGTCCCCGTCCAGAAAGGCGCGGGCC +
Preference number: 6 (lower is better)
Translates to: PLSLLLLVLLFW*ASASPSRKARA
Trigger: GGCCCGCGCCTTTCTGGACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp TCGCTGGTGTGTCCGCACTGCCACTCCCGGAGCACGTaGACCGGGAGCCAGCGCTGGTTGAAACCACAGCCA +
Preference number: 6 (lower is better)
Translates to: SLVCPHCHSRST*TGSQRWLKPQP
Trigger: TGGCTGTGGTTTCAACCAGCGCTGGCTCCCGGTCCACGTGCTCCGGGAGTGGCAGTGCGGACACACCAGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp TCCTCGACCCGCCAACAGGGCCTCTCACTGCACACATaGCCCAAGGTCACCGCCAACCACCAGAGCGACGCC +
Preference number: 6 (lower is better)
Translates to: SSTRQQGLSLHT*PKVTANHQSDA
Trigger: GGCGTCGCTCTGGTGGTTGGCGGTGACCTTGGGCCATGTGTGCAGTGAGAGGCCCTGTTGGCGGGTCGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506631.5
ENST00000506998.5
ENST00000512266.5
CDS TCA 72 bp GGCAGAACCAGGGGCAGGATTCAACCCACCCTCCTCTaGGCTCTTGAGAGGGTGGCGGTCCAGGGAGGGGAG +
Preference number: 6 (lower is better)
Translates to: GRTRGRIQPTLL*ALERVAVQGGE
Trigger: CTCCCCTCCCTGGACCGCCACCCTCTCAAGAGCTCAGAGGAGGGTGGGTTGAATCCTGCCCCTGGTTCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS GCA 72 bp GCGAGTGGATTTTCTGCTCTGCCCGCAGGCGCCGCATaGAGCCGCGGATGGCTTGCAAGCTGTCGGACTCCA +
Preference number: 6 (lower is better)
Translates to: ASGFSALPAGAA*SRGWLASCRTP
Trigger: TGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCACTCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp CCATTGGCATGCAGGGCGTCGTCTGCGTGGTCCCCGTaGTCCCTCTTTTTCTGGGACCTCCCGGTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: PLACRASSAWSP*SLFFWDLPVLL
Trigger: CAGGAGCACCGGGAGGTCCCAGAAAAAGAGGGAGCACGGGGACCACGCAGACGACGCCCTGCATGCCAATGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000513991.5
CDS GCA 72 bp TCAGCTCGGCCACGTGCTCATCCTCCACCGTCTGGATaGCCCCGGCCTCCACTTCCTGAGACTGCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SARPRAHPPPSG*PRPPLPETASS
Trigger: GGAAGAGGCAGTCTCAGGAAGTGGAGGCCGGGGGCATCCAGACGGTGGAGGATGAGCACGTGGCCGAGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
CDS GCA 72 bp CAGGTCGGCGCCCGTCAACTCGCCATCAGACACAGTTaGAGACAGCAGGAGGGTTGGGGAGACGCCTCCGAG +
Preference number: 6 (lower is better)
Translates to: QVGARQLAIRHS*RQQEGWGDASE
Trigger: CTCGGAGGCGTCTCCCCAACCCTCCTGCTGTCTGCAACTGTGTCTGATGGCGAGTTGACGGGCGCCGACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503041.5
CDS CCA 72 bp GTCCCAGAACCTGTCAGTCTGATGAGCGGCCTCAAATaGGGGGCTCCCTTCGGGGTCCGGACAGAAGGGCCC +
Preference number: 6 (lower is better)
Translates to: VPEPVSLMSGLK*GAPFGVRTEGP
Trigger: GGGCCCTTCTGTCCGGACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCATCAGACTGACAGGTTCTGGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp AAACCGTCTGCGTGGTCCCCGTGCTCCCTCTTTTTCTaGGACCTCCCGGTGCTCCTGGTCCGCGACCACGAG +
Preference number: 6 (lower is better)
Translates to: KPSAWSPCSLFF*DLPVLLVRDHE
Trigger: CTCGTGGTCGCGGACCAGGAGCACCGGGAGGTCCCAGAAAAAGAGGGAGCACGGGGACCACGCAGACGGTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506631.5
ENST00000506998.5
ENST00000512266.5
CDS CAA 90 bp AGAGGCTTGTCCCCGCCCACCAGGAAGAGGTCCGCGGCCGCCCCGTaGATGCCATGCCGCTCACAGAGTCCGGACAGGATGTCTTTGATG +
Preference number: 6 (lower is better)
Translates to: RGLSPPTRKRSAAAP*MPCRSQSPDRMSLM
Trigger: CATCAAAGACATCCTGTCCGGACTCTGTGAGCGGCATGGCATCAACGGGGCGGCCGCGGACCTCTTCCTGGTGGGCGGGGACAAGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000513991.5
ENST00000515521.5
CDS CAA 90 bp CTGGCCACCACGGGCCGCAGCACCTCCGTGACGGGCTTGGTGGGCTaGGCCTTGAGTCCCACTGACCGGTTAATCGGAACAAGATCCAGC +
Preference number: 6 (lower is better)
Translates to: LATTGRSTSVTGLVG*ALSPTDRLIGTRSS
Trigger: GCTGGATCTTGTTCCGATTAACCGGTCAGTGGGACTCAAGGCCAAGCCCACCAAGCCCGTCACGGAGGTGCTGCGGCCCGTGGTGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000504559.1
ENST00000507041.5
ENST00000507246.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS CAA 90 bp AGGCCGTATCTGGCCACCACGGGCCGCAGCACCTCCGTGACGGGCTaGGTGGGCTTGGCCTTGAGTCCCACTGACCGGTTAATCGGAACA +
Preference number: 6 (lower is better)
Translates to: RPYLATTGRSTSVTG*VGLALSPTDRLIGT
Trigger: TGTTCCGATTAACCGGTCAGTGGGACTCAAGGCCAAGCCCACCAAGCCCGTCACGGAGGTGCTGCGGCCCGTGGTGGCCAGATACGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000504559.1
ENST00000507041.5
ENST00000507246.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS GCA 72 bp AGGGCTCCCTCTCATGACGCAGCTGAGCACACAGGGTaGCTGTCCCGAAAGCGTGAATCCGTAGCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: RAPSHDAAEHTG*LSRKRESVAGP
Trigger: AGGGCCGGCTACGGATTCACGCTTTCGGGACAGGCACCCTGTGTGCTCAGCTGCGTCATGAGAGGGAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp GCTCAGTCGAAGGGGGCACGAGGCTCACCTTCCGGATaGGAAGCCCACACACCCGTGACTGCACACTGCTCT +
Preference number: 6 (lower is better)
Translates to: AQSKGARGSPSG*EAHTPVTAHCS
Trigger: AGAGCAGTGTGCAGTCACGGGTGTGTGGGCTTCGCATCCGGAAGGTGAGCCTCGTGCCCCCTTCGACTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS GCA 72 bp TTCGCCAGCGTTCAGCATGGGCATCTCCATGCCCTCTaGCCTGCCACCTGCCAAAACCACCCGGCTGGTGTC +
Preference number: 6 (lower is better)
Translates to: FASVQHGHLHAL*PATCQNHPAGV
Trigger: GACACCAGCCGGGTGGTTTTGGCAGGTGGCAGGGCAGAGGGCATGGAGATGCCCATGCTGAACGCTGGCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS GCA 72 bp CCTCATCTTCGCCAGCGTTCAGCATGGGCATCTCCATaGCCTCTGCCCTGCCACCTGCCAAAACCACCCGGC +
Preference number: 6 (lower is better)
Translates to: PHLRQRSAWASP*PLPCHLPKPPG
Trigger: GCCGGGTGGTTTTGGCAGGTGGCAGGGCAGAGGGCATGGAGATGCCCATGCTGAACGCTGGCGAAGATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS GCA 72 bp GAAGAGCACCTCACAGCATGGCCAGAAGCTCAGGGCTaGCCACGTCAAGCCCTCACCAGCGCGTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: EEHLTAWPEAQG*PRQALTSASFS
Trigger: GCTGAAGGACGCGCTGGTGAGGGCTTGACGTGGGCAGCCCTGAGCTTCTGGCCATGCTGTGAGGTGCTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS GCA 72 bp CAGGTCGGCGCCCGTCAACTCGCCATCAGACACAGTTaGAGACCAAGCAGTGCAAGAGCGGCCACCAGCAGG +
Preference number: 6 (lower is better)
Translates to: QVGARQLAIRHS*RPSSARAATSR
Trigger: CCTGCTGGTGGCCGCTCTTGCACTGCTTGGTCTGCAACTGTGTCTGATGGCGAGTTGACGGGCGCCGACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512990.5
CDS CCA 72 bp CACACTCCGCACCCTTGGGGGCGACGGCCCAGGCAATaGGCGTTTGGAGGCCTCCCCAGCTCTAAACATTCT +
Preference number: 6 (lower is better)
Translates to: HTPHPWGRRPRQ*AFGGLPSSKHS
Trigger: AGAATGTTTAGAGCTGGGGAGGCCTCCAAACGCCCATTGCCTGGGCCGTCGCCCCCAAGGGTGCGGAGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp GGAGGACGCCGGGAATTCCAGACAGCCATTGGTGTCTaGGTCGGCCGTGCACTCAAACCCAAACCGCCGAGC +
Preference number: 6 (lower is better)
Translates to: GGRREFQTAIGV*VGRALKPKPPS
Trigger: GCTCGGCGGTTTGGGTTTGAGTGCACGGCCGACCCAGACACCAATGGCTGTCTGGAATTCCCGGCGTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp CGGGGAGGGAGGACGCCGGGAATTCCAGACAGCCATTaGTGTCTGGGTCGGCCGTGCACTCAAACCCAAACC +
Preference number: 6 (lower is better)
Translates to: RGGRTPGIPDSH*CLGRPCTQTQT
Trigger: GGTTTGGGTTTGAGTGCACGGCCGACCCAGACACCAATGGCTGTCTGGAATTCCCGGCGTCCTCCCTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp ATGCCGCTGTCACTGTTGCTGCTGGTGCTGTTGTTCTaGTGGGCATCGGCGTCCCCGTCCAGAAAGGCGCGG +
Preference number: 6 (lower is better)
Translates to: MPLSLLLLVLLF*WASASPSRKAR
Trigger: CCGCGCCTTTCTGGACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 72 bp CGCACCCTTGGGGGCGACGGCCCAGGCAATGGGCGTTaGGAGGCCTCCCCAGCTCTAAACATTCTGATGAGC +
Preference number: 6 (lower is better)
Translates to: RTLGGDGPGNGR*EASPALNILMS
Trigger: GCTCATCAGAATGTTTAGAGCTGGGGAGGCCTCCAAACGCCCATTGCCTGGGCCGTCGCCCCCAAGGGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 72 bp ACGGGCCGCAGCACCTCCGTGACGGGCTTGGTGGGCTaGGCCTTGAGTCCCACTGACCGGTTAATCGGAACA +
Preference number: 6 (lower is better)
Translates to: TGRSTSVTGLVG*ALSPTDRLIGT
Trigger: TGTTCCGATTAACCGGTCAGTGGGACTCAAGGCCAAGCCCACCAAGCCCGTCACGGAGGTGCTGCGGCCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000504559.1
ENST00000507041.5
ENST00000507246.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS CAA 90 bp GATTTTCTGCTCTGCCCGCAGGCGCCGCATGCAGCCGCGGATGGCTaGCAAGCTGTCGGACTCCAGGTTGGAGCTCGTGGAAGGAAGCTC +
Preference number: 6 (lower is better)
Translates to: DFLLCPQAPHAAADG*QAVGLQVGARGRKL
Trigger: GAGCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGGCAGAGCAGAAAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 90 bp AACTGCAGGACGGGGAGGGAGGACGCCGGGAATTCCAGACAGCCATaGGTGTCTGGGTCGGCCGTGCACTCAAACCCAAACCGCCGAGCA +
Preference number: 6 (lower is better)
Translates to: NCRTGREDAGNSRQP*VSGSAVHSNPNRRA
Trigger: TGCTCGGCGGTTTGGGTTTGAGTGCACGGCCGACCCAGACACCAATGGCTGTCTGGAATTCCCGGCGTCCTCCCTCCCCGTCCTGCAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 90 bp TGGTGGAAGTTCCCAATGCCGCTGTCACTGTTGCTGCTGGTGCTGTaGTTCTGGTGGGCATCGGCGTCCCCGTCCAGAAAGGCGCGGGCC +
Preference number: 6 (lower is better)
Translates to: WWKFPMPLSLLLLVL*FWWASASPSRKARA
Trigger: GGCCCGCGCCTTTCTGGACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 90 bp ACCACGGGCCGCAGCACCTCCGTGACGGGCTTGGTGGGCTTGGCCTaGAGTCCCACTGACCGGTTAATCGGAACAAGATCCAGCCGAAAC +
Preference number: 6 (lower is better)
Translates to: TTGRSTSVTGLVGLA*SPTDRLIGTRSSRN
Trigger: GTTTCGGCTGGATCTTGTTCCGATTAACCGGTCAGTGGGACTCAAGGCCAAGCCCACCAAGCCCGTCACGGAGGTGCTGCGGCCCGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000504559.1
ENST00000507041.5
ENST00000507246.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS CAA 90 bp AGCCCGGGCGGCCCCGAGCAAAGGCCTGCGTCCCACACAGGGACATaGCTCCTGAGCTCACACTCCCAGGAGGCCAATTATTGCAGTTTC +
Preference number: 6 (lower is better)
Translates to: SPGGPEQRPASHTGT*LLSSHSQEANYCSF
Trigger: GAAACTGCAATAATTGGCCTCCTGGGAGTGTGAGCTCAGGAGCAATGTCCCTGTGTGGGACGCAGGCCTTTGCTCGGGGCCGCCCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643191.1
CDS TCA 72 bp CAGGTGGAGGTGTCCCGGGAAAGCCAGACGGCCCAATaGGTCAAGAGTCACGGCTCCCACTCCGCCCAAACT +
Preference number: 6 (lower is better)
Translates to: QVEVSRESQTAQ*VKSHGSHSAQT
Trigger: AGTTTGGGCGGAGTGGGAGCCGTGACTCTTGACTCATTGGGCCGTCTGGCTTTCCCGGGACACCTCCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS TCA 72 bp ATGGCACAGCGCGCTCCCAGGACACCGGATCCTGCCTaGCGTGTCTGCAAAACGGCCCTCAGTAGCCTTTGG +
Preference number: 6 (lower is better)
Translates to: MAQRAPRTPDPA*RVCKTALSSLW
Trigger: CCAAAGGCTACTGAGGGCCGTTTTGCAGACACGTCAGGCAGGATCCGGTGTCCTGGGAGCGCGCTGTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS GCA 72 bp GATCTTCATGGTCACCAGCGAGTGGATTTTCTGCTCTaGCCGCAGGCGCCGCATGCAGCCGCGGATGGCTTG +
Preference number: 6 (lower is better)
Translates to: DLHGHQRVDFLL*PQAPHAAADGL
Trigger: CAAGCCATCCGCGGCTGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCACTCGCTGGTGACCATGAAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp TCGAGCTCCCACCCAGGTCCACCACAAGGACCCGGTTaGTCTTCTCCTCCTGGTGGAAGTTCCCAATGCCGC +
Preference number: 6 (lower is better)
Translates to: SSSHPGPPQGPG*SSPPGGSSQCR
Trigger: GCGGCATTGGGAACTTCCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGGTGGACCTGGGTGGGAGCTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp ACCAGGAAGAGGTCCGCGGCCGCCCCGTTGATGCCATaGCGCTCACAGAGTCCGGACAGGATGTCTTTGATG +
Preference number: 6 (lower is better)
Translates to: TRKRSAAAPLMP*RSQSPDRMSLM
Trigger: CATCAAAGACATCCTGTCCGGACTCTGTGAGCGGCATGGCATCAACGGGGCGGCCGCGGACCTCTTCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000513991.5
ENST00000515521.5
CDS GCA 72 bp GAGAAGCTTCCTCGACCCGCCAACAGGGCCTCTCACTaGACACATGGCCCAAGGTCACCGCCAACCACCAGA +
Preference number: 6 (lower is better)
Translates to: EKLPRPANRASH*THGPRSPPTTR
Trigger: TCTGGTGGTTGGCGGTGACCTTGGGCCATGTGTGCAGTGAGAGGCCCTGTTGGCGGGTCGAGGAAGCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506631.5
ENST00000506998.5
ENST00000512266.5
CDS CCA 72 bp CGTGCTCCCTCTTTTTCTGGGACCTCCCGGTGCTCCTaGTCCGCGACCACGAGAAAAACGCGCCTTTCCGCT +
Preference number: 6 (lower is better)
Translates to: RAPSFSGTSRCS*SATTRKTRLSA
Trigger: AGCGGAAAGGCGCGTTTTTCTCGTGGTCGCGGACCAGGAGCACCGGGAGGTCCCAGAAAAAGAGGGAGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000506631.5
ENST00000506998.5
ENST00000508158.5
ENST00000512266.5
ENST00000513991.5
CDS CCA 72 bp AGGCGCAGGTCCCTTGACTCCAAGATGCTACTGTCTTaGTGCAGCACCAGAGGCTTGTCCCCGCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: RRRSLDSKMLLS*CSTRGLSPPTR
Trigger: CCTGGTGGGCGGGGACAAGCCTCTGGTGCTGCACCAAGACAGTAGCATCTTGGAGTCAAGGGACCTGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000507041.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS CCA 72 bp GCAGACTCTGGGAGGTTCTCAGAGGCACTCTCCAGGTaGAGGTGTCCCGGGAAAGCCAGACGGCCCAATGAG +
Preference number: 6 (lower is better)
Translates to: ADSGRFSEALSR*RCPGKARRPNE
Trigger: CTCATTGGGCCGTCTGGCTTTCCCGGGACACCTCCACCTGGAGAGTGCCTCTGAGAACCTCCCAGAGTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS CCA 72 bp TCGGCGGCTCATTTACAGGAGACCCGATGTGGGATATaGCACAGCGCGCTCCCAGGACACCGGATCCTGCCT +
Preference number: 6 (lower is better)
Translates to: SAAHLQETRCGI*HSALPGHRILP
Trigger: AGGCAGGATCCGGTGTCCTGGGAGCGCGCTGTGCCATATCCCACATCGGGTCTCCTGTAAATGAGCCGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS CCA 72 bp TGTCGGCTCGGCGGCTCATTTACAGGAGACCCGATGTaGGATATGGCACAGCGCGCTCCCAGGACACCGGAT +
Preference number: 6 (lower is better)
Translates to: CRLGGSFTGDPM*DMAQRAPRTPD
Trigger: ATCCGGTGTCCTGGGAGCGCGCTGTGCCATATCCCACATCGGGTCTCCTGTAAATGAGCCGCCGAGCCGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS CCA 72 bp CAGAGCCCTGCGACTCTCGGCGACACAGGCCTCCATTaGCATGCAGGGCGTCTTGACAGGGGAAACACAGTG +
Preference number: 6 (lower is better)
Translates to: QSPATLGDTGLH*HAGRLDRGNTV
Trigger: CACTGTGTTTCCCCTGTCAAGACGCCCTGCATGCCAATGGAGGCCTGTGTCGCCGAGAGTCGCAGGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510803.1
CDS CAA 72 bp ACGGGGAGGGAGGACGCCGGGAATTCCAGACAGCCATaGGTGTCTGGGTCGGCCGTGCACTCAAACCCAAAC +
Preference number: 6 (lower is better)
Translates to: TGREDAGNSRQP*VSGSAVHSNPN
Trigger: GTTTGGGTTTGAGTGCACGGCCGACCCAGACACCAATGGCTGTCTGGAATTCCCGGCGTCCTCCCTCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 72 bp TCAGGTCGGCGCCCGTCAACTCGCCATCAGACACAGTaGCAGACCAAGCAGTGCAAGAGCGGCCACCAGCAG +
Preference number: 6 (lower is better)
Translates to: SGRRPSTRHQTQ*QTKQCKSGHQQ
Trigger: CTGCTGGTGGCCGCTCTTGCACTGCTTGGTCTGCAACTGTGTCTGATGGCGAGTTGACGGGCGCCGACCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512990.5
CDS CAA 90 bp TCCACACTCCGCACCCTTGGGGGCGACGGCCCAGGCAATGGGCGTTaGGAGGCCTCCCCAGCTCTAAACATTCTGATGAGCTTCCAAGAC +
Preference number: 6 (lower is better)
Translates to: STLRTLGGDGPGNGR*EASPALNILMSFQD
Trigger: GTCTTGGAAGCTCATCAGAATGTTTAGAGCTGGGGAGGCCTCCAAACGCCCATTGCCTGGGCCGTCGCCCCCAAGGGTGCGGAGTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 90 bp GCCCCGTTGATGCCATGCCGCTCACAGAGTCCGGACAGGATGTCTTaGATGGAGAAGCCCGCCTTGACAGCCACCACGCAGGATGTCCCA +
Preference number: 6 (lower is better)
Translates to: APLMPCRSQSPDRMS*MEKPALTATTQDVP
Trigger: TGGGACATCCTGCGTGGTGGCTGTCAAGGCGGGCTTCTCCATCAAAGACATCCTGTCCGGACTCTGTGAGCGGCATGGCATCAACGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000513991.5
ENST00000515521.5
CDS CAA 90 bp CGCCCGGGCGCCGAGCCAGTTACAAGATCCACATCGATGATTCTGTaGACTGGGAGGTCTCGGCTGCCATGGGTCCCACTTCCTGGTCTG +
Preference number: 6 (lower is better)
Translates to: RPGAEPVTRSTSMIL*TGRSRLPWVPLPGL
Trigger: CAGACCAGGAAGTGGGACCCATGGCAGCCGAGACCTCCCAGTCAACAGAATCATCGATGTGGATCTTGTAACTGGCTCGGCGCCCGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000504194.5
CDS GCA 72 bp TGCATGATCTTCATGGTCACCAGCGAGTGGATTTTCTaGTCTGCCCGCAGGCGCCGCATGCAGCCGCGGATG +
Preference number: 6 (lower is better)
Translates to: CMIFMVTSEWIF*SARRRRMQPRM
Trigger: CATCCGCGGCTGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCACTCGCTGGTGACCATGAAGATCATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp TCCTCCTCCTGGGCCAGGCTCCCGTCGTCATTCGTCTaGATGGTAACCAACCCGAAAAATCGCCGGTCGTCC +
Preference number: 6 (lower is better)
Translates to: SSSWARLPSSFV*MVTNPKNRRSS
Trigger: GGACGACCGGCGATTTTTCGGGTTGGTTACCATGCAGACGAATGACGACGGGAGCCTGGCCCAGGAGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp GGAAGTTCCCAATGCCGCTGTCACTGTTGCTGCTGGTaGTGTTGTTCTGGTGGGCATCGGCGTCCCCGTCCA +
Preference number: 6 (lower is better)
Translates to: GSSQCRCHCCCW*CCSGGHRRPRP
Trigger: TGGACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp CCTGGTGGAAGTTCCCAATGCCGCTGTCACTGTTGCTaGTGGTGCTGTTGTTCTGGTGGGCATCGGCGTCCC +
Preference number: 6 (lower is better)
Translates to: PGGSSQCRCHCC*WCCCSGGHRRP
Trigger: GGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp AATGCAGCAGTGCTTGGTGGCCTTGTCCTTCTCGGGTaGCAAAGTCCTGCAGGCCTCCGACAGGTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: NAAVLGGLVLLG*QSPAGLRQVQA
Trigger: AGCCTGGACCTGTCGGAGGCCTGCAGGACTTTGGCACCCGAGAAGGACAAGGCCACCAAGCACTGCTGCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000510803.1
ENST00000513991.5
ENST00000515521.5
CDS GCA 72 bp CAGCCACCACGCAGGATGTCCCATCCGGGAGATGAATaGAGCAGTGCTTGGTGGCCTTGTCCTTCTCGGGTG +
Preference number: 6 (lower is better)
Translates to: QPPRRMSHPGDE*SSAWWPCPSRV
Trigger: CACCCGAGAAGGACAAGGCCACCAAGCACTGCTGCATTCATCTCCCGGATGGGACATCCTGCGTGGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000510803.1
ENST00000513991.5
ENST00000515521.5
CDS GCA 72 bp CGCAGGTCCCTTGACTCCAAGATGCTACTGTCTTGGTaGAGCACCAGAGGCTTGTCCCCGCCCACCAGGAAG +
Preference number: 6 (lower is better)
Translates to: RRSLDSKMLLSW*STRGLSPPTRK
Trigger: CTTCCTGGTGGGCGGGGACAAGCCTCTGGTGCTGCACCAAGACAGTAGCATCTTGGAGTCAAGGGACCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000507041.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS GCA 72 bp CCCGTGTTTGATCTGATCCCTGGGCAGGCACTCTGCTaGTATCTAGGCAGGAACCCCTTCCTGCGGGGACCT +
Preference number: 6 (lower is better)
Translates to: PVFDLIPGQALC*YLGRNPFLRGP
Trigger: AGGTCCCCGCAGGAAGGGGTTCCTGCCTAGATAGCAGCAGAGTGCCTGCCCAGGGATCAGATCAAACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508158.5
CDS GCA 72 bp TGCTCGGTAGTCTCTGCAGAGCACAGACCGCTCCGCTaGTCCTGGGCCCTTCCCTACTCACAGAGAAGTAGC +
Preference number: 6 (lower is better)
Translates to: CSVVSAEHRPLR*SWALPYSQRSS
Trigger: GCTACTTCTCTGTGAGTAGGGAAGGGCCCAGGAGCAGCGGAGCGGTCTGTGCTCTGCAGAGACTACCGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS CCA 72 bp GGTGGAAGTTCCCAATGCCGCTGTCACTGTTGCTGCTaGTGCTGTTGTTCTGGTGGGCATCGGCGTCCCCGT +
Preference number: 6 (lower is better)
Translates to: GGSSQCRCHCCC*CCCSGGHRRPR
Trigger: ACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp AGCCATCGGTGGAATCTGTGTAAGAGTCCTGGTCGCTaGTGTGTCCGCACTGCCACTCCCGGAGCACGTGGA +
Preference number: 6 (lower is better)
Translates to: SHRWNLCKSPGR*CVRTATPGARG
Trigger: TCCACGTGCTCCGGGAGTGGCAGTGCGGACACACCAGCGACCAGGACTCTTACACAGATTCCACCGATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp CCACGCTTACGGGGCCAAGGTGGAGGGATCAGAACCTaGAGGTACCTGGTCTGGAAGGTCCTGGCACTTCCT +
Preference number: 6 (lower is better)
Translates to: PRLRGQGGGIRT*RYLVWKVLALP
Trigger: AGGAAGTGCCAGGACCTTCCAGACCAGGTACCTCCAGGTTCTGATCCCTCCACCTTGGCCCCGTAAGCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS CCA 72 bp GGTACAGAACAGCCTCATCTTCGCCAGCGTTCAGCATaGGCATCTCCATGCCCTCTGCCCTGCCACCTGCCA +
Preference number: 6 (lower is better)
Translates to: GTEQPHLRQRSA*ASPCPLPCHLP
Trigger: TGGCAGGTGGCAGGGCAGAGGGCATGGAGATGCCCATGCTGAACGCTGGCGAAGATGAGGCTGTTCTGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CAA 72 bp AGCTTCTCGGCCGGGTACTCGGCCACGACTCCAGCCTaGTCAGTGCTCAGCTGCACACAGTCGTGCATGATC +
Preference number: 6 (lower is better)
Translates to: SFSAGYSATTPA*SVLSCTQSCMI
Trigger: GATCATGCACGACTGTGTGCAGCTGAGCACTGACAAGGCTGGAGTCGTGGCCGAGTACCCGGCCGAGAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 72 bp CGCAGCACCTCCGTGACGGGCTTGGTGGGCTTGGCCTaGAGTCCCACTGACCGGTTAATCGGAACAAGATCC +
Preference number: 6 (lower is better)
Translates to: RSTSVTGLVGLA*SPTDRLIGTRS
Trigger: GGATCTTGTTCCGATTAACCGGTCAGTGGGACTCAAGGCCAAGCCCACCAAGCCCGTCACGGAGGTGCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000504559.1
ENST00000507041.5
ENST00000507246.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS CAA 72 bp GGCCCCGAGCAAAGGCCTGCGTCCCACACAGGGACATaGCTCCTGAGCTCACACTCCCAGGAGGCCAATTAT +
Preference number: 6 (lower is better)
Translates to: GPEQRPASHTGT*LLSSHSQEANY
Trigger: ATAATTGGCCTCCTGGGAGTGTGAGCTCAGGAGCAATGTCCCTGTGTGGGACGCAGGCCTTTGCTCGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643191.1
CDS CAA 90 bp CTGAAGGCCAGCTTCTCGGCCGGGTACTCGGCCACGACTCCAGCCTaGTCAGTGCTCAGCTGCACACAGTCGTGCATGATCTTCATGGTC +
Preference number: 6 (lower is better)
Translates to: LKASFSAGYSATTPA*SVLSCTQSCMIFMV
Trigger: GACCATGAAGATCATGCACGACTGTGTGCAGCTGAGCACTGACAAGGCTGGAGTCGTGGCCGAGTACCCGGCCGAGAAGCTGGCCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 90 bp TTGCTCTTCTCCTCCTGGTGGAAGTTCCCAATGCCGCTGTCACTGTaGCTGCTGGTGCTGTTGTTCTGGTGGGCATCGGCGTCCCCGTCC +
Preference number: 6 (lower is better)
Translates to: LLFSSWWKFPMPLSL*LLVLLFWWASASPS
Trigger: GGACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACCAGGAGGAGAAGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS TCA 72 bp CCAGGTATGGGGATGGGCACGAGTGGATGGACTGTCTaGAGCGAACACTCCCATCTCCCAGGTACTCGGGAG +
Preference number: 6 (lower is better)
Translates to: PGMGMGTSGWTV*SEHSHLPGTRE
Trigger: CTCCCGAGTACCTGGGAGATGGGAGTGTTCGCTTCAGACAGTCCATCCACTCGTGCCCATCCCCATACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS GCA 72 bp AGCTCACCCATGTCTCGGTACAGGACAGAGATGAACTaGAGGACGGGGAGGGAGGACGCCGGGAATTCCAGA +
Preference number: 6 (lower is better)
Translates to: SSPMSRYRTEMN*RTGREDAGNSR
Trigger: TCTGGAATTCCCGGCGTCCTCCCTCCCCGTCCTGCAGTTCATCTCTGTCCTGTACCGAGACATGGGTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp CCTCCTGGTGGAAGTTCCCAATGCCGCTGTCACTGTTaGTGCTGGTGCTGTTGTTCTGGTGGGCATCGGCGT +
Preference number: 6 (lower is better)
Translates to: PPGGSSQCRCHC*CWCCCSGGHRR
Trigger: ACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp TTCTTAACACAGATAGGAAGCTCCAGTGCTGCGGGCTaGAGAGAGACCCCAGTAGAGAGCGGGAGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: FLTQIGSSSAAG*RETPVESGRAR
Trigger: CCTGGCCCTCCCGCTCTCTACTGGGGTCTCTCTGCAGCCCGCAGCACTGGAGCTTCCTATCTGTGTTAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS GCA 72 bp CTCACCTTCCGGATGCGAAGCCCACACACCCGTGACTaGACACTGCTCTGCATGTGGGCTCCTTCTCAACAC +
Preference number: 6 (lower is better)
Translates to: LTFRMRSPHTRD*TLLCMWAPSQH
Trigger: GTGTTGAGAAGGAGCCCACATGCAGAGCAGTGTGCAGTCACGGGTGTGTGGGCTTCGCATCCGGAAGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS CCA 72 bp CTGGAAGCTGAGCAGACCACGCTTACGGGGCCAAGGTaGAGGGATCAGAACCTGGAGGTACCTGGTCTGGAA +
Preference number: 6 (lower is better)
Translates to: LEAEQTTLTGPR*RDQNLEVPGLE
Trigger: TTCCAGACCAGGTACCTCCAGGTTCTGATCCCTCCACCTTGGCCCCGTAAGCGTGGTCTGCTCAGCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382788.7
CDS CAA 72 bp CAGCCGCGGATGGCTTGCAAGCTGTCGGACTCCAGGTaGGAGCTCGTGGAAGGAAGCTCAATGGAGCCTAAG +
Preference number: 6 (lower is better)
Translates to: QPRMACKLSDSR*ELVEGSSMEPK
Trigger: CTTAGGCTCCATTGAGCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 72 bp TTCCCAATGCCGCTGTCACTGTTGCTGCTGGTGCTGTaGTTCTGGTGGGCATCGGCGTCCCCGTCCAGAAAG +
Preference number: 6 (lower is better)
Translates to: FPMPLSLLLLVL*FWWASASPSRK
Trigger: CTTTCTGGACGGGGACGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 72 bp TCCTCCTGGTGGAAGTTCCCAATGCCGCTGTCACTGTaGCTGCTGGTGCTGTTGTTCTGGTGGGCATCGGCG +
Preference number: 6 (lower is better)
Translates to: SSWWKFPMPLSL*LLVLLFWWASA
Trigger: CGCCGATGCCCACCAGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACCAGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 72 bp AGTCCGGACAGGATGTCTTTGATGGAGAAGCCCGCCTaGACAGCCACCACGCAGGATGTCCCATCCGGGAGA +
Preference number: 6 (lower is better)
Translates to: SPDRMSLMEKPA*TATTQDVPSGR
Trigger: TCTCCCGGATGGGACATCCTGCGTGGTGGCTGTCAAGGCGGGCTTCTCCATCAAAGACATCCTGTCCGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000510803.1
ENST00000513991.5
ENST00000515521.5
CDS CAA 72 bp ATGCCATGCCGCTCACAGAGTCCGGACAGGATGTCTTaGATGGAGAAGCCCGCCTTGACAGCCACCACGCAG +
Preference number: 6 (lower is better)
Translates to: MPCRSQSPDRMS*MEKPALTATTQ
Trigger: CTGCGTGGTGGCTGTCAAGGCGGGCTTCTCCATCAAAGACATCCTGTCCGGACTCTGTGAGCGGCATGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000513991.5
ENST00000515521.5
CDS CAA 72 bp AGACCATCATGGCAACAAGATGTTTCCCAAACAGGCTaGCTAGAGCGAAAGCAGCTGGGCGCGGGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: RPSWQQDVSQTG*LERKQLGAGRR
Trigger: GCGGCGCCCCGCGCCCAGCTGCTTTCGCTCTAGCAAGCCTGTTTGGGAAACATCTTGTTGCCATGATGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS CAA 90 bp AGAGCACTAAGACCATCATGGCAACAAGATGTTTCCCAAACAGGCTaGCTAGAGCGAAAGCAGCTGGGCGCGGGGCGCCGCGTATGCCAC +
Preference number: 6 (lower is better)
Translates to: RALRPSWQQDVSQTG*LERKQLGAGRRVCH
Trigger: GTGGCATACGCGGCGCCCCGCGCCCAGCTGCTTTCGCTCTAGCAAGCCTGTTTGGGAAACATCTTGTTGCCATGATGGTCTTAGTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS CAA 90 bp GGCGTGAGCTCCCACGCCTGGCTCTATCAAGGTTTTCAAAGCCCTTaGCAGATCTGCCAGGTATGGGGATGGGCACGAGTGGATGGACTG +
Preference number: 6 (lower is better)
Translates to: GVSSHAWLYQGFQSP*QICQVWGWARVDGL
Trigger: CAGTCCATCCACTCGTGCCCATCCCCATACCTGGCAGATCTGCAAAGGGCTTTGAAAACCTTGATAGAGCCAGGCGTGGGAGCTCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS TCA 72 bp CAATCAGCTCACCCATGTCTCGGTACAGGACAGAGATaGACTGCAGGACGGGGAGGGAGGACGCCGGGAATT +
Preference number: 6 (lower is better)
Translates to: QSAHPCLGTGQR*TAGRGGRTPGI
Trigger: AATTCCCGGCGTCCTCCCTCCCCGTCCTGCAGTTCATCTCTGTCCTGTACCGAGACATGGGTGAGCTGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS TCA 72 bp ATGATCTCCGAGCAGACGTGCGTTGAGAAGGCTGAGTaGGTCCAGTTCCCCGCCCAAATTTTGAGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: MISEQTCVEKAE*VQFPAQILSPG
Trigger: GCCCGGGCTCAAAATTTGGGCGGGGAACTGGACTCACTCAGCCTTCTCAACGCACGTCTGCTCGGAGATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506631.5
CDS GCA 72 bp GGAATTCCAGACAGCCATTGGTGTCTGGGTCGGCCGTaGACTCAAACCCAAACCGCCGAGCAATGCCTTGGT +
Preference number: 6 (lower is better)
Translates to: GIPDSHWCLGRP*TQTQTAEQCLG
Trigger: ACCAAGGCATTGCTCGGCGGTTTGGGTTTGAGTGCACGGCCGACCCAGACACCAATGGCTGTCTGGAATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp TCCGGATGCGAAGCCCACACACCCGTGACTGCACACTaGTCTGCATGTGGGCTCCTTCTCAACACGAAACTC +
Preference number: 6 (lower is better)
Translates to: SGCEAHTPVTAH*SACGLLLNTKL
Trigger: GAGTTTCGTGTTGAGAAGGAGCCCACATGCAGAGCAGTGTGCAGTCACGGGTGTGTGGGCTTCGCATCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS CCA 72 bp AGCCGCGGATGGCTTGCAAGCTGTCGGACTCCAGGTTaGAGCTCGTGGAAGGAAGCTCAATGGAGCCTAAGT +
Preference number: 6 (lower is better)
Translates to: SRGWLASCRTPG*SSWKEAQWSLS
Trigger: ACTTAGGCTCCATTGAGCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACAGCTTGCAAGCCATCCGCGGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp ACACAGTCGTGCATGATCTTCATGGTCACCAGCGAGTaGATTTTCTGCTCTGCCCGCAGGCGCCGCATGCAG +
Preference number: 6 (lower is better)
Translates to: TQSCMIFMVTSE*IFCSARRRRMQ
Trigger: CTGCATGCGGCGCCTGCGGGCAGAGCAGAAAATCCACTCGCTGGTGACCATGAAGATCATGCACGACTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp AGGTCCACCACAAGGACCCGGTTGCTCTTCTCCTCCTaGTGGAAGTTCCCAATGCCGCTGTCACTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: RSTTRTRLLFSS*WKFPMPLSLLL
Trigger: CAGCAACAGTGACAGCGGCATTGGGAACTTCCACCAGGAGGAGAAGAGCAACCGGGTCCTTGTGGTGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp AGGATGTCCCATCCGGGAGATGAATGCAGCAGTGCTTaGTGGCCTTGTCCTTCTCGGGTGCCAAAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: RMSHPGDECSSA*WPCPSRVPKSC
Trigger: GCAGGACTTTGGCACCCGAGAAGGACAAGGCCACCAAGCACTGCTGCATTCATCTCCCGGATGGGACATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000508158.5
ENST00000510803.1
ENST00000513991.5
ENST00000515521.5
CDS CCA 72 bp TCGATGATTCTGTTGACTGGGAGGTCTCGGCTGCCATaGGTCCCACTTCCTGGTCTGGAAGGTCCTGGCACT +
Preference number: 6 (lower is better)
Translates to: SMILLTGRSRLP*VPLPGLEGPGT
Trigger: AGTGCCAGGACCTTCCAGACCAGGAAGTGGGACCCATGGCAGCCGAGACCTCCCAGTCAACAGAATCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000504194.5
CDS CCA 72 bp ATGATGGCTCCCACTGCACAGAACGAGAACTGGGGATaGCAGAGGCTGTCTCCTCTCCTCCAAGGGGGACAA +
Preference number: 6 (lower is better)
Translates to: MMAPTAQNENWG*QRLSPLLQGGQ
Trigger: TTGTCCCCCTTGGAGGAGAGGAGACAGCCTCTGCCATCCCCAGTTCTCGTTCTGTGCAGTGGGAGCCATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509746.5
CDS TCA 72 bp CGTGACGGGCTTGGTGGGCTTGGCCTTGAGTCCCACTaGCCGGTTAATCGGAACAAGATCCAGCCGAAACAA +
Preference number: 6 (lower is better)
Translates to: RDGLGGLGLESH*PVNRNKIQPKQ
Trigger: TTGTTTCGGCTGGATCTTGTTCCGATTAACCGGTCAGTGGGACTCAAGGCCAAGCCCACCAAGCCCGTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000504559.1
ENST00000507041.5
ENST00000507246.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS TCA 72 bp CGGCGACACAGGCCTCCATTGGCATGCAGGGCGTCTTaGCAGGGGAAACACAGTGACTCACGTCAATCAGAA +
Preference number: 6 (lower is better)
Translates to: RRHRPPLACRAS*QGKHSDSRQSE
Trigger: TTCTGATTGACGTGAGTCACTGTGTTTCCCCTGTCAAGACGCCCTGCATGCCAATGGAGGCCTGTGTCGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510803.1
CDS GCA 72 bp TACTCGGCCACGACTCCAGCCTTGTCAGTGCTCAGCTaGACACAGTCGTGCATGATCTTCATGGTCACCAGC +
Preference number: 6 (lower is better)
Translates to: YSATTPALSVLS*TQSCMIFMVTS
Trigger: GCTGGTGACCATGAAGATCATGCACGACTGTGTGCAGCTGAGCACTGACAAGGCTGGAGTCGTGGCCGAGTA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp CCCGGTTGCTCTTCTCCTCCTGGTGGAAGTTCCCAATaGCGCTGTCACTGTTGCTGCTGGTGCTGTTGTTCT +
Preference number: 6 (lower is better)
Translates to: PGCSSPPGGSSQ*RCHCCCWCCCS
Trigger: AGAACAACAGCACCAGCAGCAACAGTGACAGCGGCATTGGGAACTTCCACCAGGAGGAGAAGAGCAACCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp TGCGCTTTTCTAGGCGCAGGTCCCTTGACTCCAAGATaGTACTGTCTTGGTGCAGCACCAGAGGCTTGTCCC +
Preference number: 6 (lower is better)
Translates to: CAFLGAGPLTPR*YCLGAAPEACP
Trigger: GGGACAAGCCTCTGGTGCTGCACCAAGACAGTAGCATCTTGGAGTCAAGGGACCTGCGCCTAGAAAAGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000507041.5
ENST00000507246.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS GCA 72 bp ATGCGAAGCCCACACACCCGTGACTGCACACTGCTCTaGATGTGGGCTCCTTCTCAACACGAAACTCTCAGG +
Preference number: 6 (lower is better)
Translates to: MRSPHTRDCTLL*MWAPSQHETLR
Trigger: CCTGAGAGTTTCGTGTTGAGAAGGAGCCCACATGCAGAGCAGTGTGCAGTCACGGGTGTGTGGGCTTCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS GCA 72 bp TGGCCTCCGACAAAGGTGAACTCTGCAACTCTCAGCTaGCTTTGCTCGGAGAAGAGCACCTCACAGCATGGC +
Preference number: 6 (lower is better)
Translates to: WPPTKVNSATLS*LCSEKSTSQHG
Trigger: GCCATGCTGTGAGGTGCTCTTCTCCGAGCAAAGGCAGCTGAGAGTTGCAGAGTTCACCTTTGTCGGAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CCA 72 bp TGGCTTGCAAGCTGTCGGACTCCAGGTTGGAGCTCGTaGAAGGAAGCTCAATGGAGCCTAAGTAGCCCACGA +
Preference number: 6 (lower is better)
Translates to: WLASCRTPGWSS*KEAQWSLSSPR
Trigger: TCGTGGGCTACTTAGGCTCCATTGAGCTTCCTTCCACGAGCTCCAACCTGGAGTCCGACAGCTTGCAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp CGAAAAGTCCATCTGAGGAACACAAGGGGCAGACTCTaGGAGGTTCTCAGAGGCACTCTCCAGGTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: RKVHLRNTRGRL*EVLRGTLQVEV
Trigger: CACCTCCACCTGGAGAGTGCCTCTGAGAACCTCCCAGAGTCTGCCCCTTGTGTTCCTCAGATGGACTTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS CCA 72 bp AGCCCACACACCCGTGACTGCACACTGCTCTGCATGTaGGCTCCTTCTCAACACGAAACTCTCAGGCACAGT +
Preference number: 6 (lower is better)
Translates to: SPHTRDCTLLCM*APSQHETLRHS
Trigger: ACTGTGCCTGAGAGTTTCGTGTTGAGAAGGAGCCCACATGCAGAGCAGTGTGCAGTCACGGGTGTGTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512266.5
ENST00000513991.5
CDS CCA 72 bp CCCATCCCCCACCAGGCATCACTTTGCCGTCTCTGGTaGAGACGAGTCACATGTGTCTTCCTAACCCTGGAA +
Preference number: 6 (lower is better)
Translates to: PIPHQASLCRLW*RRVTCVFLTLE
Trigger: TTCCAGGGTTAGGAAGACACATGTGACTCGTCTCCACCAGAGACGGCAAAGTGATGCCTGGTGGGGGATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510803.1
CDS CAA 72 bp AGGGATGGAGCAGGGAACAAAACACAGACCCCAACCTaGAGCGGCTGCACATGTGTGTGCACGAGCACACAC +
Preference number: 6 (lower is better)
Translates to: RDGAGNKTQTPT*SGCTCVCTSTH
Trigger: GTGTGTGCTCGTGCACACACATGTGCAGCCGCTCAAGGTTGGGGTCTGTGTTTTGTTCCCTGCTCCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CAA 72 bp ATTGCTCCTGAGCTCACACTCCCAGGAGGCCAATTATaGCAGTTTCTCCCGCGATCCCAGCACACGGCTGAC +
Preference number: 6 (lower is better)
Translates to: IAPELTLPGGQL*QFLPRSQHTAD
Trigger: GTCAGCCGTGTGCTGGGATCGCGGGAGAAACTGCAATAATTGGCCTCCTGGGAGTGTGAGCTCAGGAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643191.1
CDS TCA 72 bp AGCAAAGGCCTGCGTCCCACACAGGGACATTGCTCCTaGGCTCACACTCCCAGGAGGCCAATTATTGCAGTT +
Preference number: 6 (lower is better)
Translates to: SKGLRPTQGHCS*AHTPRRPIIAV
Trigger: AACTGCAATAATTGGCCTCCTGGGAGTGTGAGCTCAGGAGCAATGTCCCTGTGTGGGACGCAGGCCTTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643191.1
CDS GCA 72 bp CAGGTCGGCGCCCGTCAACTCGCCATCAGACACAGTTaGAGACTCAAGATCATCAAGGGAGCGAGTGATACT +
Preference number: 6 (lower is better)
Translates to: QVGARQLAIRHS*RLKIIKGASDT
Trigger: AGTATCACTCGCTCCCTTGATGATCTTGAGTCTGCAACTGTGTCTGATGGCGAGTTGACGGGCGCCGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000506631.5
ENST00000513784.7
CDS GCA 72 bp CCGACAAAGGTGAACTCTGCAACTCTCAGCTGCCTTTaGTCGGAGAAGAGCACCTCACAGCATGGCCAGAAG +
Preference number: 6 (lower is better)
Translates to: PTKVNSATLSCL*SEKSTSQHGQK
Trigger: CTTCTGGCCATGCTGTGAGGTGCTCTTCTCCGAGCAAAGGCAGCTGAGAGTTGCAGAGTTCACCTTTGTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CCA 72 bp CGGACTCCAGGTTGGAGCTCGTGGAAGGAAGCTCAATaGAGCCTAAGTAGCCCACGATCATCGCCACGTTTA +
Preference number: 6 (lower is better)
Translates to: RTPGWSSWKEAQ*SLSSPRSSPRL
Trigger: TAAACGTGGCGATGATCGTGGGCTACTTAGGCTCCATTGAGCTTCCTTCCACGAGCTCCAACCTGGAGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp GCCAGTTACAAGATCCACATCGATGATTCTGTTGACTaGGAGGTCTCGGCTGCCATGGGTCCCACTTCCTGG +
Preference number: 6 (lower is better)
Translates to: ASYKIHIDDSVD*EVSAAMGPTSW
Trigger: CCAGGAAGTGGGACCCATGGCAGCCGAGACCTCCCAGTCAACAGAATCATCGATGTGGATCTTGTAACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000504194.5
CDS CAA 72 bp GCCGAAACAAGGTGCGCTTTTCTAGGCGCAGGTCCCTaGACTCCAAGATGCTACTGTCTTGGTGCAGCACCA +
Preference number: 6 (lower is better)
Translates to: AETRCAFLGAGP*TPRCYCLGAAP
Trigger: TGGTGCTGCACCAAGACAGTAGCATCTTGGAGTCAAGGGACCTGCGCCTAGAAAAGCGCACCTTGTTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000507041.5
ENST00000507246.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS CAA 72 bp GCCGAGCCAGTTACAAGATCCACATCGATGATTCTGTaGACTGGGAGGTCTCGGCTGCCATGGGTCCCACTT +
Preference number: 6 (lower is better)
Translates to: AEPVTRSTSMIL*TGRSRLPWVPL
Trigger: AAGTGGGACCCATGGCAGCCGAGACCTCCCAGTCAACAGAATCATCGATGTGGATCTTGTAACTGGCTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000504194.5
ENST00000509772.1
CDS CAA 72 bp TCCCACGCCTGGCTCTATCAAGGTTTTCAAAGCCCTTaGCAGATCTGCCAGGTATGGGGATGGGCACGAGTG +
Preference number: 6 (lower is better)
Translates to: SHAWLYQGFQSP*QICQVWGWARV
Trigger: CACTCGTGCCCATCCCCATACCTGGCAGATCTGCAAAGGGCTTTGAAAACCTTGATAGAGCCAGGCGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CAA 90 bp GTCTGGGTCGGCCGTGCACTCAAACCCAAACCGCCGAGCAATGCCTaGGTGGATCTTGTGATTAAACAAGTCTGGGTCCACCATGAACAC +
Preference number: 6 (lower is better)
Translates to: VWVGRALKPKPPSNA*VDLVIKQVWVHHEH
Trigger: GTGTTCATGGTGGACCCAGACTTGTTTAATCACAAGATCCACCAAGGCATTGCTCGGCGGTTTGGGTTTGAGTGCACGGCCGACCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 90 bp CAAGATCCAGCCGAAACAAGGTGCGCTTTTCTAGGCGCAGGTCCCTaGACTCCAAGATGCTACTGTCTTGGTGCAGCACCAGAGGCTTGT +
Preference number: 6 (lower is better)
Translates to: QDPAETRCAFLGAGP*TPRCYCLGAAPEAC
Trigger: ACAAGCCTCTGGTGCTGCACCAAGACAGTAGCATCTTGGAGTCAAGGGACCTGCGCCTAGAAAAGCGCACCTTGTTTCGGCTGGATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000336727.7
ENST00000338806.4
ENST00000344733.9
ENST00000382788.7
ENST00000504194.5
ENST00000507041.5
ENST00000507246.5
ENST00000508158.5
ENST00000509746.5
ENST00000511709.5
ENST00000513991.5
ENST00000515521.5
CDS GCA 72 bp CAGGTCGGCGCCCGTCAACTCGCCATCAGACACAGTTaGAGACTGCTGGTCATTAGAAACATGGGTTTCGTT +
Preference number: 6 (lower is better)
Translates to: QVGARQLAIRHS*RLLVIRNMGFV
Trigger: AACGAAACCCATGTTTCTAATGACCAGCAGTCTGCAACTGTGTCTGATGGCGAGTTGACGGGCGCCGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338806.4
ENST00000506998.5
CDS CCA 72 bp GCCAGTTACAAGATCCACATCGATGATTCTGTTGACTaGGAGGTCTCGGCTGCCATGGGTCCCACTTCCGTA +
Preference number: 6 (lower is better)
Translates to: ASYKIHIDDSVD*EVSAAMGPTSV
Trigger: TACGGAAGTGGGACCCATGGCAGCCGAGACCTCCCAGTCAACAGAATCATCGATGTGGATCTTGTAACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509772.1
CDS CCA 72 bp CAAGGTTTTCAAAGCCCTTTGCAGATCTGCCAGGTATaGGGATGGGCACGAGTGGATGGACTGTCTGAAGCG +
Preference number: 6 (lower is better)
Translates to: QGFQSPLQICQV*GWARVDGLSEA
Trigger: CGCTTCAGACAGTCCATCCACTCGTGCCCATCCCCATACCTGGCAGATCTGCAAAGGGCTTTGAAAACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CAA 72 bp GGCCGTGCACTCAAACCCAAACCGCCGAGCAATGCCTaGGTGGATCTTGTGATTAAACAAGTCTGGGTCCAC +
Preference number: 6 (lower is better)
Translates to: GRALKPKPPSNA*VDLVIKQVWVH
Trigger: GTGGACCCAGACTTGTTTAATCACAAGATCCACCAAGGCATTGCTCGGCGGTTTGGGTTTGAGTGCACGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS TCA 72 bp ATGATCTCCGAGCAGACGTGCGTTGAGAAGGCTGAGTaGGTCCAGTTCCCCGCCCAAATTTTGAGCCCTTTT +
Preference number: 6 (lower is better)
Translates to: MISEQTCVEKAE*VQFPAQILSPF
Trigger: AAAAGGGCTCAAAATTTGGGCGGGGAACTGGACTCACTCAGCCTTCTCAACGCACGTCTGCTCGGAGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000511805.5
ENST00000514268.5
CDS TCA 72 bp GCCACTGTGTGGGGTAGGCCTGAGGTAGGCATGGGCTaGAATGTATTGAGCCCTTTTCTCTGGAAGATTCTG +
Preference number: 6 (lower is better)
Translates to: ATVWGRPEVGMG*NVLSPFLWKIL
Trigger: CAGAATCTTCCAGAGAAAAGGGCTCAATACATTTCAGCCCATGCCTACCTCAGGCCTACCCCACACAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506631.5
ENST00000506998.5
ENST00000512266.5
CDS TCA 72 bp GTCAAGAGTCACGGCTCCCACTCCGCCCAAACTAGGTaGCACCCAACAAGAGGAAGTCATCCTTTTCATGTG +
Preference number: 6 (lower is better)
Translates to: VKSHGSHSAQTR*HPTRGSHPFHV
Trigger: CACATGAAAAGGATGACTTCCTCTTGTTGGGTGTCACCTAGTTTGGGCGGAGTGGGAGCCGTGACTCTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS GCA 72 bp ACTCCAGCCTTGTCAGTGCTCAGCTGCACACAGTCGTaGATGATCTTCATGGTCACCAGCGAGTGGATTTTC +
Preference number: 6 (lower is better)
Translates to: TPALSVLSCTQS*MIFMVTSEWIF
Trigger: GAAAATCCACTCGCTGGTGACCATGAAGATCATGCACGACTGTGTGCAGCTGAGCACTGACAAGGCTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS GCA 72 bp GCCTTGCACACAGGCCTCTCAGGATGGTCTCGGGCCTaGTGTGTAGTCTCTTCTGCAAGACTCTTTAAAGAT +
Preference number: 6 (lower is better)
Translates to: ALHTGLSGWSRA*CVVSSARLFKD
Trigger: ATCTTTAAAGAGTCTTGCAGAAGAGACTACACAGCAGGCCCGAGACCATCCTGAGAGGCCTGTGTGCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344733.9
CDS GCA 72 bp TGGCTCTATCAAGGTTTTCAAAGCCCTTTGCAGATCTaGCAGGTATGGGGATGGGCACGAGTGGATGGACTG +
Preference number: 6 (lower is better)
Translates to: WLYQGFQSPLQI*QVWGWARVDGL
Trigger: CAGTCCATCCACTCGTGCCCATCCCCATACCTGGCAGATCTGCAAAGGGCTTTGAAAACCTTGATAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CCA 72 bp AGCCTTTTCCTTCATAGAGTCCCCCTTCTTCATCACTaGAACAGGATTCGAAGCGGCCGACGCCTTCAGCAA +
Preference number: 6 (lower is better)
Translates to: SLFLHRVPLLHH*NRIRSGRRLQQ
Trigger: TTGCTGAAGGCGTCGGCCGCTTCGAATCCTGTTCCAGTGATGAAGAAGGGGGACTCTATGAAGGAAAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp ATCTTCCCAGTTCTCCCCTATGTGCTTTTCAGCACCTaGTACAGAACAGCCTCATCTTCGCCAGCGTTCAGC +
Preference number: 6 (lower is better)
Translates to: IFPVLPYVLFST*YRTASSSPAFS
Trigger: GCTGAACGCTGGCGAAGATGAGGCTGTTCTGTACCAGGTGCTGAAAAGCACATAGGGGAGAACTGGGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CCA 72 bp TTTCAAAGCCCTTTGCAGATCTGCCAGGTATGGGGATaGGCACGAGTGGATGGACTGTCTGAAGCGAACACT +
Preference number: 6 (lower is better)
Translates to: FQSPLQICQVWG*ARVDGLSEANT
Trigger: AGTGTTCGCTTCAGACAGTCCATCCACTCGTGCCCATCCCCATACCTGGCAGATCTGCAAAGGGCTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CCA 72 bp CCATATGACTTCAGGGGTAGCCATTCCCACATCTCCTaGCACATGTGGACCACTCAAGATCATCAAGGGAGC +
Preference number: 6 (lower is better)
Translates to: PYDFRGSHSHIS*HMWTTQDHQGS
Trigger: GCTCCCTTGATGATCTTGAGTGGTCCACATGTGCCAGGAGATGTGGGAATGGCTACCCCTGAAGTCATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511805.5
CDS TCA 72 bp GGAGCGAGTGATACTGAATCTCTTGGATCTCCCAAATaGTCTCCGAGCAGACGTGCGTTGAGAAGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: GASDTESLGSPK*SPSRRALRRLS
Trigger: ACTCAGCCTTCTCAACGCACGTCTGCTCGGAGATCATTTGGGAGATCCAAGAGATTCAGTATCACTCGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000506631.5
ENST00000511805.5
ENST00000513784.7
ENST00000514268.5
CDS TCA 72 bp CATGCCAGCTGGTGCTATCGCAATCACCTCACTGCCTaGTTTAAACTTGGAGACCACAGGCTAAGTGCCAGT +
Preference number: 6 (lower is better)
Translates to: HASWCYRNHLTA*FKLGDHRLSAS
Trigger: ACTGGCACTTAGCCTGTGGTCTCCAAGTTTAAATCAGGCAGTGAGGTGATTGCGATAGCACCAGCTGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS GCA 72 bp GCGCCCGTCAACTCGCCATCAGACACAGTTGCAGACTaGTGGTCATTAGAAACATGGGTTTCGTTTGACAAC +
Preference number: 6 (lower is better)
Translates to: APVNSPSDTVAD*WSLETWVSFDN
Trigger: GTTGTCAAACGAAACCCATGTTTCTAATGACCAGCAGTCTGCAACTGTGTCTGATGGCGAGTTGACGGGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338806.4
ENST00000506998.5
CDS GCA 72 bp ATGACCAAGGTACAAATAAACCATGATGGCTCCCACTaGACAGAACGAGAACTGGGGATGGCAGAGGCTGTC +
Preference number: 6 (lower is better)
Translates to: MTKVQINHDGSH*TERELGMAEAV
Trigger: GACAGCCTCTGCCATCCCCAGTTCTCGTTCTGTGCAGTGGGAGCCATCATGGTTTATTTGTACCTTGGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509746.5
CDS CCA 72 bp AGCAATGCCTTGGTGGATCTTGTGATTAAACAAGTCTaGGTCCACCATGAACACGTGGCAGGAAGTCCGCAG +
Preference number: 6 (lower is better)
Translates to: SNALVDLVIKQV*VHHEHVAGSPQ
Trigger: CTGCGGACTTCCTGCCACGTGTTCATGGTGGACCCAGACTTGTTTAATCACAAGATCCACCAAGGCATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS TCA 72 bp GATTCGAAGCGGCCGACGCCTTCAGCAATCACCATGTaGAGGACACCAGAGCACTTCCCAATTAATTTCACT +
Preference number: 6 (lower is better)
Translates to: DSKRPTPSAITM*RTPEHFPINFT
Trigger: AGTGAAATTAATTGGGAAGTGCTCTGGTGTCCTTCACATGGTGATTGCTGAAGGCGTCGGCCGCTTCGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS TCA 72 bp ATTGGCATGCAGGGCGTCTTGACAGGGGAAACACAGTaGCTCACGTCAATCAGAACCCTGTTTATTCGGTCA +
Preference number: 6 (lower is better)
Translates to: IGMQGVLTGETQ*LTSIRTLFIRS
Trigger: TGACCGAATAAACAGGGTTCTGATTGACGTGAGTCACTGTGTTTCCCCTGTCAAGACGCCCTGCATGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510803.1
CDS GCA 72 bp TCAACAACTATGCACAGCACACCTACCACCTGCCAGTaGATTCTACACACAGGGATGGAGCAGGGAACAAAA +
Preference number: 6 (lower is better)
Translates to: STTMHSTPTTCQ*ILHTGMEQGTK
Trigger: TTTTGTTCCCTGCTCCATCCCTGTGTGTAGAATGCACTGGCAGGTGGTAGGTGTGCTGTGCATAGTTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS CCA 72 bp GCAAAACATCTCTTTGAAGAGCTGGCAACAGGCACCTaGCTTCTTAACACAGATAGGAAGCTCCAGTGCTGC +
Preference number: 6 (lower is better)
Translates to: AKHLFEELATGT*LLNTDRKLQCC
Trigger: GCAGCACTGGAGCTTCCTATCTGTGTTAAGAAGCCAGGTGCCTGTTGCCAGCTCTTCAAAGAGATGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS CAA 72 bp AACCCATGGCAACAGGACACTGCAGGAAGCTGTGGCTaGCCAGGGTTTCAGACTCTATCTCAATTGTCTCAT +
Preference number: 6 (lower is better)
Translates to: NPWQQDTAGSCG*PGFQTLSQLSH
Trigger: ATGAGACAATTGAGATAGAGTCTGAAACCCTGGCAAGCCACAGCTTCCTGCAGTGTCCTGTTGCCATGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS CAA 90 bp TCCCTTCGTAACCCATGGCAACAGGACACTGCAGGAAGCTGTGGCTaGCCAGGGTTTCAGACTCTATCTCAATTGTCTCATCCAAAGAAA +
Preference number: 6 (lower is better)
Translates to: SLRNPWQQDTAGSCG*PGFQTLSQLSHPKK
Trigger: TTTCTTTGGATGAGACAATTGAGATAGAGTCTGAAACCCTGGCAAGCCACAGCTTCCTGCAGTGTCCTGTTGCCATGGGTTACGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS CAA 90 bp AAGGAATGCTTGATGCTACCATGTTTGCTTCTTCAAACAGTGCCCTaGTTCCCCACACAAGCAGCTAAGCACAGGGAGCCCCTCTTCATT +
Preference number: 6 (lower is better)
Translates to: KECLMLPCLLLQTVP*FPTQAAKHREPLFI
Trigger: AATGAAGAGGGGCTCCCTGTGCTTAGCTGCTTGTGTGGGGAACAAGGGCACTGTTTGAAGAAGCAAACATGGTAGCATCAAGCATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344733.9
CDS CAA 72 bp TCAAGATCATCAAGGGAGCGAGTGATACTGAATCTCTaGGATCTCCCAAATGATCTCCGAGCAGACGTGCGT +
Preference number: 6 (lower is better)
Translates to: SRSSRERVILNL*DLPNDLRADVR
Trigger: ACGCACGTCTGCTCGGAGATCATTTGGGAGATCCAAGAGATTCAGTATCACTCGCTCCCTTGATGATCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000506631.5
ENST00000511805.5
ENST00000513784.7
ENST00000514268.5
CDS TCA 72 bp CTAAGACACACCATTCAACACCGCAGCTTGTGCGTGTaGGAAAAGTTTAAAGGCATTTCCGATGAAGTTCCC +
Preference number: 6 (lower is better)
Translates to: LRHTIQHRSLCV*EKFKGISDEVP
Trigger: GGGAACTTCATCGGAAATGCCTTTAAACTTTTCTCACACGCACAAGCTGCGGTGTTGAATGGTGTGTCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338806.4
CDS CAA 72 bp CATCCCCCAGCTCTTCATTCAGGGATCGGCCGGATTTaGATTTTCCACTTAACTGTCATCAAATGGAAACCT +
Preference number: 6 (lower is better)
Translates to: HPPALHSGIGRI*IFHLTVIKWKP
Trigger: AGGTTTCCATTTGATGACAGTTAAGTGGAAAATCAAAATCCGGCCGATCCCTGAATGAAGAGCTGGGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512266.5
CDS TCA 72 bp GGTGACACCCAACAAGAGGAAGTCATCCTTTTCATGTaGAAAGAACAGATCCCAACATGTCTGACATTACAG +
Preference number: 6 (lower is better)
Translates to: GDTQQEEVILFM*KEQIPTCLTLQ
Trigger: CTGTAATGTCAGACATGTTGGGATCTGTTCTTTTCACATGAAAAGGATGACTTCCTCTTGTTGGGTGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS CCA 72 bp CCCTTTTTATCTTCCTTAGTCTTTCGAACATTTCGATaGGGACCAAAAATGCTTTGCATTCCAAAGGCCTTC +
Preference number: 6 (lower is better)
Translates to: PFLSSLVFRTFR*GPKMLCIPKAF
Trigger: GAAGGCCTTTGGAATGCAAAGCATTTTTGGTCCCCATCGAAATGTTCGAAAGACTAAGGAAGATAAAAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CCA 72 bp TCAGACACAGTTGCAGACTGCTGGTCATTAGAAACATaGGTTTCGTTTGACAACTCTTTCCCCAAATTCATT +
Preference number: 6 (lower is better)
Translates to: SDTVADCWSLET*VSFDNSFPKFI
Trigger: AATGAATTTGGGGAAAGAGTTGTCAAACGAAACCCATGTTTCTAATGACCAGCAGTCTGCAACTGTGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338806.4
ENST00000506998.5
CDS CAA 90 bp TGGGATTTGGATTATTTATACTTTCATGTCCAACATCAAATCGAGTaGCGGCCGACTCTGAAAGGGATCTTTGTTTCAATTTCAAGGGCT +
Preference number: 6 (lower is better)
Translates to: WDLDYLYFHVQHQIE*RPTLKGIFVSISRA
Trigger: AGCCCTTGAAATTGAAACAAAGATCCCTTTCAGAGTCGGCCGCAACTCGATTTGATGTTGGACATGAAAGTATAAATAATCCAAATCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 72 bp GAAAGGGATCTTTGTTTCAATTTCAAGGGCTCTGAATaGCTCGCACAAAGGCTCGGGTTTTCAAAAATCATA +
Preference number: 6 (lower is better)
Translates to: ERDLCFNFKGSE*LAQRLGFSKII
Trigger: TATGATTTTTGAAAACCCGAGCCTTTGTGCGAGCAATTCAGAGCCCTTGAAATTGAAACAAAGATCCCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS TCA 72 bp TCCTTTTCATGTGAAAAGAACAGATCCCAACATGTCTaGCATTACAGTCTTAGTAACAGCGTCAATGAAACC +
Preference number: 6 (lower is better)
Translates to: SFSCEKNRSQHV*HYSLSNSVNET
Trigger: GGTTTCATTGACGCTGTTACTAAGACTGTAATGTCAGACATGTTGGGATCTGTTCTTTTCACATGAAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504194.5
CDS GCA 72 bp AAAGGGATCTTTGTTTCAATTTCAAGGGCTCTGAATTaGTCGCACAAAGGCTCGGGTTTTCAAAAATCATAT +
Preference number: 6 (lower is better)
Translates to: KGIFVSISRALN*SHKGSGFQKSY
Trigger: ATATGATTTTTGAAAACCCGAGCCTTTGTGCGAGCAATTCAGAGCCCTTGAAATTGAAACAAAGATCCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 72 bp GATTATTTATACTTTCATGTCCAACATCAAATCGAGTaGCGGCCGACTCTGAAAGGGATCTTTGTTTCAATT +
Preference number: 6 (lower is better)
Translates to: DYLYFHVQHQIE*RPTLKGIFVSI
Trigger: AATTGAAACAAAGATCCCTTTCAGAGTCGGCCGCAACTCGATTTGATGTTGGACATGAAAGTATAAATAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336727.7
ENST00000344733.9
ENST00000382788.7
ENST00000502947.1
ENST00000514268.5
CDS CAA 72 bp GTTTTTGCCACTGAGTTGTATGAGTTCCTTATGTATTaGGATATTAACCCCTTACTGGATATACAGTTTGCA +
Preference number: 6 (lower is better)
Translates to: VFATELYEFLMY*DINPLLDIQFA
Trigger: TGCAAACTGTATATCCAGTAAGGGGTTAATATCCAAATACATAAGGAACTCATACAACTCAGTGGCAAAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511805.5
CDS CCA 72 bp TTTTTGCCACTGAGTTGTATGAGTTCCTTATGTATTTaGATATTAACCCCTTACTGGATATACAGTTTGCAA +
Preference number: 6 (lower is better)
Translates to: FLPLSCMSSLCI*ILTPYWIYSLQ
Trigger: TTGCAAACTGTATATCCAGTAAGGGGTTAATATCCAAATACATAAGGAACTCATACAACTCAGTGGCAAAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511805.5