RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RGS11 (Homo sapiens)

Ensembl gene IDs: ENSG00000076344

Ensembl transcript IDs: ENST00000168869.12, ENST00000316163.9, ENST00000359740.6, ENST00000397770.8, ENST00000472466.1, ENST00000477143.5, ENST00000481672.5, ENST00000493449.5

Found 527 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCGCAGCCCCTCCAGGGTCTGCTCCATGGTCCGGCTGTCGATGTTaGCCCAGTGGGCAGCTCCGGGGGCCAGGAACTGCTCGTACACGG +
Preference number: 1 (lower is better)
Translates to: GAAPPGSAPWSGCRC*PSGQLRGPGTARTR
Trigger: CCGTGTACGAGCAGTTCCTGGCCCCCGGAGCTGCCCACTGGGTCAACATCGACAGCCGGACCATGGAGCAGACCCTGGAGGGGCTGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR GCA 90 bp GACAGCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTaGATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCT +
Preference number: 1 (lower is better)
Translates to: DSGEALGRGRARAET*MSASCDGCVGSRPP
Trigger: AGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR TCA 90 bp TGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTGTaGCGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGG +
Preference number: 1 (lower is better)
Translates to: WTGQSSRRDLHVRVL*RVCGKPPACASCFR
Trigger: CCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 90 bp CAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTaGGCGACAGCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCG +
Preference number: 1 (lower is better)
Translates to: QPQHGTLLGPLPGSH*ATAERLLDGAELAP
Trigger: CGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 90 bp CCCTCCAGGGTCTGCTCCATGGTCCGGCTGTCGATGTTGACCCAGTaGGCAGCTCCGGGGGCCAGGAACTGCTCGTACACGGCATCCACC +
Preference number: 1 (lower is better)
Translates to: PSRVCSMVRLSMLTQ*AAPGARNCSYTAST
Trigger: GGTGGATGCCGTGTACGAGCAGTTCCTGGCCCCCGGAGCTGCCCACTGGGTCAACATCGACAGCCGGACCATGGAGCAGACCCTGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CCA 90 bp TGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTaGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTG +
Preference number: 1 (lower is better)
Translates to: WVLFQAHTGRQRRGS*TGQSSRRDLHVRVL
Trigger: CAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR TCA 90 bp TCGGGGGCCTGTTCACCAGCCAGTAGGTCTGCTCCTGGCACGCAATaGCCAGCCTGTCCCCCTTGCTGCGCTGCTTGGCTGCCCTCAGCT +
Preference number: 1 (lower is better)
Translates to: SGACSPASRSAPGTQ*PACPPCCAAWLPSA
Trigger: AGCTGAGGGCAGCCAAGCAGCGCAGCAAGGGGGACAGGCTGGTCATTGCGTGCCAGGAGCAGACCTACTGGCTGGTGAACAGGCCCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CCA 90 bp GAGATCCAGGGATTGCTGGGCAGGCACCCCGACACGAGGGGATCGTaGGGTCCACGCTGGCCGCAGAAACTCAGGTACGCCTCAAGGCAG +
Preference number: 1 (lower is better)
Translates to: EIQGLLGRHPDTRGS*GPRWPQKLRYASRQ
Trigger: CTGCCTTGAGGCGTACCTGAGTTTCTGCGGCCAGCGTGGACCCCACGATCCCCTCGTGTCGGGGTGCCTGCCCAGCAATCCCTGGATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CCA 90 bp CAGCTCCGGGGGCCAGGAACTGCTCGTACACGGCATCCACCAGGGTaGGGACCTGGGCCTGCGCTCCATATCGAAGCTCCTCACATGCCT +
Preference number: 1 (lower is better)
Translates to: QLRGPGTARTRHPPG*GPGPALHIEAPHMP
Trigger: AGGCATGTGAGGAGCTTCGATATGGAGCGCAGGCCCAGGTCCCCACCCTGGTGGATGCCGTGTACGAGCAGTTCCTGGCCCCCGGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CCA 90 bp CTCCACAGGGGTGGGAAGGAGTGCAGGGCTGGGGCTCGAGTGCCGTaGCCTCCACGTAAACGGGAACACGCGTCTCTTCATCTCCAGCGG +
Preference number: 1 (lower is better)
Translates to: LHRGGKECRAGARVP*PPRKREHASLHLQR
Trigger: CCGCTGGAGATGAAGAGACGCGTGTTCCCGTTTACGTGGAGGCCACGGCACTCGAGCCCCAGCCCTGCACTCCTTCCCACCCCTGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CCA 90 bp GAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTaGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGG +
Preference number: 1 (lower is better)
Translates to: ELAPRPACPRLVTGV*EAARLCILLPGIRW
Trigger: CCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR TCA 90 bp GACCTGGGCCAAGACGGGGGTGGCTGCTGCATTCACGCAGGACGTTaGGCTGCAGGGACTAGAGTGGCAGATGGGCCAGGTCCACTAGGC +
Preference number: 1 (lower is better)
Translates to: DLGQDGGGCCIHAGR*AAGTRVADGPGPLG
Trigger: GCCTAGTGGACCTGGCCCATCTGCCACTCTAGTCCCTGCAGCTCAACGTCCTGCGTGAATGCAGCAGCCACCCCCGTCTTGGCCCAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR TCA 90 bp CCAGCCCTATGGGTGGGGATGGCACCGCCCTACCGCCGAGAGAGTTaGAGCTGCACCCCCGAAAGGAGCCAGCTGTACCTTCACCCAGTC +
Preference number: 1 (lower is better)
Translates to: PALWVGMAPPYRRES*SCTPERSQLYLHPV
Trigger: GACTGGGTGAAGGTACAGCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCATCCCCACCCATAGGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 90 bp GGGGCCAGGAACTGCTCGTACACGGCATCCACCAGGGTGGGGACCTaGGCCTGCGCTCCATATCGAAGCTCCTCACATGCCTCCCAGAAG +
Preference number: 1 (lower is better)
Translates to: GARNCSYTASTRVGT*ACAPYRSSSHASQK
Trigger: CTTCTGGGAGGCATGTGAGGAGCTTCGATATGGAGCGCAGGCCCAGGTCCCCACCCTGGTGGATGCCGTGTACGAGCAGTTCCTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR TCA 90 bp GAACGCGTTTGGCGAGGGAGGAATAGGCGCAGCTCCGGAAGGCAGTaGCCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTC +
Preference number: 1 (lower is better)
Translates to: ERVWRGRNRRSSGRQ*PRGSLSTALSWVLF
Trigger: GAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTCACTGCCTTCCGGAGCTGCGCCTATTCCTCCCTCGCCAAACGCGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 90 bp CCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTaGAACGCGTTTGGCGAGGGAGGAATAGGCGCAGCTCCGGAAGGC +
Preference number: 1 (lower is better)
Translates to: PRGGKAGAGAPVDKF*NAFGEGGIGAAPEG
Trigger: GCCTTCCGGAGCTGCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR GCA 90 bp AGGAACTGCTCGTACACGGCATCCACCAGGGTGGGGACCTGGGCCTaGGCTCCATATCGAAGCTCCTCACATGCCTCCCAGAAGCTGAGG +
Preference number: 1 (lower is better)
Translates to: RNCSYTASTRVGTWA*APYRSSSHASQKLR
Trigger: CCTCAGCTTCTGGGAGGCATGTGAGGAGCTTCGATATGGAGCGCAGGCCCAGGTCCCCACCCTGGTGGATGCCGTGTACGAGCAGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CCA 90 bp CTGTACCTTCACCCAGTCTGGGGGACTGGTGAGGCACTTGGGGGATaGGGAGCAAGGCCAGCTCACGAAGGAAGACTTGGGCAGGGAGGA +
Preference number: 1 (lower is better)
Translates to: LYLHPVWGTGEALGG*GARPAHEGRLGQGG
Trigger: TCCTCCCTGCCCAAGTCTTCCTTCGTGAGCTGGCCTTGCTCCCCATCCCCCAAGTGCCTCACCAGTCCCCCAGACTGGGTGAAGGTACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR TCA 90 bp CAGGGCCCAAGGGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTaGCTGGATGTGAGCCAGCCCTATGGGTGGGGATGGCACCGCCCT +
Preference number: 1 (lower is better)
Translates to: QGPRVFYLCAGRCWE*LDVSQPYGWGWHRP
Trigger: AGGGCGGTGCCATCCCCACCCATAGGGCTGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCTTGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR TCA 90 bp GGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTaGTTTACTGGTTTTAGAGATGGGGATGGGCACCCAGTGCTGGAC +
Preference number: 1 (lower is better)
Translates to: GKPPACASCFRVFAG*FTGFRDGDGHPVLD
Trigger: GTCCAGCACTGGGTGCCCATCCCCATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 90 bp CAGTGCTGGACTGAAGACCAGAGAAGGTGGAGCTCCCTGTGGCCTTaGTCTCACCTCTCTTCAGGTAACAGGCTCTGCCCTGACCCAAGC +
Preference number: 1 (lower is better)
Translates to: QCWTEDQRRWSSLWP*SHLSSGNRLCPDPS
Trigger: GCTTGGGTCAGGGCAGAGCCTGTTACCTGAAGAGAGGTGAGACCAAGGCCACAGGGAGCTCCACCTTCTCTGGTCTTCAGTCCAGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 90 bp GAGATGGGGATGGGCACCCAGTGCTGGACTGAAGACCAGAGAAGGTaGAGCTCCCTGTGGCCTTGGTCTCACCTCTCTTCAGGTAACAGG +
Preference number: 1 (lower is better)
Translates to: EMGMGTQCWTEDQRR*SSLWPWSHLSSGNR
Trigger: CCTGTTACCTGAAGAGAGGTGAGACCAAGGCCACAGGGAGCTCCACCTTCTCTGGTCTTCAGTCCAGCACTGGGTGCCCATCCCCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 90 bp AGGATGGGCTCAGAGCCAGGGCCCAAGGGTCTTTTATTTGTGTGCTaGACGCTGTTGGGAGTGACTGGATGTGAGCCAGCCCTATGGGTG +
Preference number: 1 (lower is better)
Translates to: RMGSEPGPKGLLFVC*TLLGVTGCEPALWV
Trigger: CACCCATAGGGCTGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCTTGGGCCCTGGCTCTGAGCCCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR GCA 90 bp AAACGGGAACACGCGTCTCTTCATCTCCAGCGGGATCCCAGCCTCTaGCAGGAGGGCCTTGTACATGTCAGACTTCAGGAACCTTGGGTA +
Preference number: 1 (lower is better)
Translates to: KREHASLHLQRDPSL*QEGLVHVRLQEPWV
Trigger: TACCCAAGGTTCCTGAAGTCTGACATGTACAAGGCCCTCCTGGCAGAGGCTGGGATCCCGCTGGAGATGAAGAGACGCGTGTTCCCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CCA 90 bp TCCACTAGGCCACCCCATCTCCACCCCCAGGGCCACAAGCCGCTGTGGGCTCCACGGCATCCACCAGGGTaGGGACCTGGGCCTGCGCTC +
Preference number: 2 (lower is better)
Translates to: STRPPHLHPQGHKPLWAPRHPPG*GPGPAL
Trigger: GAGCGCAGGCCCAGGTCCCCACCCTGGTGGATGCCG...TGGAGCCCACAGCGGCTTGTGGCCCTGGGGGTGGAGATGGGGTGGCCTAGTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CCA 90 bp CAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTGGCCGCGGCCTCGAGGTaGGAAAGCAGGTGCCGGCGC +
Preference number: 2 (lower is better)
Translates to: QGRLARIHPMESGLVSGVAAASR*ESRCRR
Trigger: GCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGC...CACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CAA 90 bp TGGCGCAGCCCCTCCAGGGTCTGCTCCATGGTCCGGCTGTCGATGTaGACCCAGTGGGCAGCTCCGGGGGCCAGGAACTGCTCGTACACG +
Preference number: 2 (lower is better)
Translates to: WRSPSRVCSMVRLSM*TQWAAPGARNCSYT
Trigger: CGTGTACGAGCAGTTCCTGGCCCCCGGAGCTGCCCACTGGGTCAACATCGACAGCCGGACCATGGAGCAGACCCTGGAGGGGCTGCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR TCA 90 bp GGAGGCCGCGGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATAGCTCCGGAAGGCAGTaGCCTCGAGGCAGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: GGRGLEVGKQVPAHLWTNSSGRQ*PRGSLS
Trigger: GCTGAGGCTGCCTCGAGGTCACTGCCTTCCGGAGCT...ATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR GCA 90 bp CTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTGTGACGGCTGCGCTGCTTGGCTaGCCTCAGCTGCTCCCTCGC +
Preference number: 2 (lower is better)
Translates to: LLDGAELAPRPACPRLVTAALLG*PQLLPR
Trigger: GCGAGGGAGCAGCTGAGGGCAGCCAAGCAGCGCAGC...CGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CCA 90 bp TCCACTAGGCCACCCCATCTCCACCCCCAGGGCCACAAGCCGCTGTGGGCTCCATCGATGTTGACCCAGTaGGCAGCTCCGGGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: STRPPHLHPQGHKPLWAPSMLTQ*AAPGAR
Trigger: CCTGGCCCCCGGAGCTGCCCACTGGGTCAACATCGA...TGGAGCCCACAGCGGCTTGTGGCCCTGGGGGTGGAGATGGGGTGGCCTAGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CCA 90 bp TGGAGGGAGGGAGGCTGTGCACCCCACAGAAGACTGGGCCCCCTGGGCACAAGGGGGCCAAGACGGGGGTaGCTGCTGCATTCACGCAGG +
Preference number: 2 (lower is better)
Translates to: WREGGCAPHRRLGPLGTRGPRRG*LLHSRR
Trigger: CCTGCGTGAATGCAGCAGCCACCCCCGTCTTGGCCC...CCTTGTGCCCAGGGGGCCCAGTCTTCTGTGGGGTGCACAGCCTCCCTCCCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp GCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTAGGGGACACTGGTGCTaGGTTCAGCAGCCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: AERLLDGAELAPRPACPRRGHWC*VQQPPG
Trigger: TCCTGGGGGCTGCTGAACCCAGCACCAGTGTCCCCT...ACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR TCA 90 bp GGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCGGAGCTCCCGGAAGCTaGAGCCCCATCTCTCCACAC +
Preference number: 2 (lower is better)
Translates to: GSSSRLTLGDSGEALGRGGAPGS*SPISPH
Trigger: GTGTGGAGAGATGGGGCTTCAGCTTCCGGGAGCTCC...GCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR GCA 90 bp TGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGGCCTGTCCCCCTTGCTaGGCTGCTTGGCTGCCCTCA +
Preference number: 2 (lower is better)
Translates to: WVLFQAHTGRQRRGSWTGACPPC*AAWLPS
Trigger: TGAGGGCAGCCAAGCAGCGCAGCAAGGGGGACAGGC...CCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CCA 90 bp GGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCGGGGCTCGAGTGCCGTaGCCTCCACGTAAACGGGAA +
Preference number: 2 (lower is better)
Translates to: GSSSRLTLGDSGEALGRGGARVP*PPRKRE
Trigger: TTCCCGTTTACGTGGAGGCCACGGCACTCGAGCCCC...GCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CCA 90 bp GGAGGCCGCGGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATGAAGACTGGGCCCCCTaGGCACAAGGGGACACTGGT +
Preference number: 2 (lower is better)
Translates to: GGRGLEVGKQVPAHLWTNEDWAP*AQGDTG
Trigger: ACCAGTGTCCCCTTGTGCCCAGGGGGCCCAGTCTTC...ATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CAA 90 bp TTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTaGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTT +
Preference number: 2 (lower is better)
Translates to: LGPLPGSHWATAERL*DGAELAPRPACPRL
Trigger: AAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR TCA 90 bp TGGCACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCAGCTTCCCAGAAAGTCCATaGAGTGGGCCCGCCCCACGG +
Preference number: 2 (lower is better)
Translates to: WHRPTAERVEAAPPKGASFPESP*SGPAPR
Trigger: CCGTGGGGCGGGCCCACTTCATGGACTTTCTGGGAA...GCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR GCA 90 bp CGAGTGCCGTGGCCTCCACGTAAACGGGAACACGCGTCTCTTCATCTCCAGCGGCCAGCCTGTCCCCCTTaGTGCGCTGCTTGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: RVPWPPRKREHASLHLQRPACPP*CAAWLP
Trigger: GGGCAGCCAAGCAGCGCAGCAAGGGGGACAGGCTGG...CCGCTGGAGATGAAGAGACGCGTGTTCCCGTTTACGTGGAGGCCACGGCACTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR GCA 90 bp CGACAGCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCTGAGATCCAGGGATTaGTGGGCAGGCACCCCGACA +
Preference number: 2 (lower is better)
Translates to: RQRRGSWTGQSSRRDLHVLRSRD*WAGTPT
Trigger: TGTCGGGGTGCCTGCCCAGCAATCCCTGGATCTCAG...GACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR GCA 90 bp GGAGGCCGCGGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATACAAGGGGACACTGGTaGTGGGTTCAGCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: GGRGLEVGKQVPAHLWTNTRGHW*WVQQPP
Trigger: TGGGGGCTGCTGAACCCAGCACCAGTGTCCCCTTGT...ATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp CGACAGCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCTGGACCCATTCCTTCTaGGCAGGGAGGGCTTGCTGG +
Preference number: 2 (lower is better)
Translates to: RQRRGSWTGQSSRRDLHVWTHSF*AGRACW
Trigger: CCAGCAAGCCCTCCCTGCCCAGAAGGAATGGGTCCA...GACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CAA 90 bp GCCAGCCCTATGGGTGGGGATGGCACCGCCCTACCGCCGAGAGAGTaGAAGCTGCACCCCCGAAAGGAGCCAGCTGTACCTTCACCCAGT +
Preference number: 2 (lower is better)
Translates to: ASPMGGDGTALPPRE*KLHPRKEPAVPSPS
Trigger: ACTGGGTGAAGGTACAGCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCATCCCCACCCATAGGGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR TCA 90 bp GATGGGCCAGGTCCACTAGGCCACCCCATCTCCACCCCCAGGGCCACAAGCCGCGTAGGCGTCATTGTCTaGGATCCAGGGATTGCTGGG +
Preference number: 2 (lower is better)
Translates to: DGPGPLGHPISTPRATSRVGVIV*DPGIAG
Trigger: CCCAGCAATCCCTGGATCTCAGACAATGACGCCTAC...GCGGCTTGTGGCCCTGGGGGTGGAGATGGGGTGGCCTAGTGGACCTGGCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR TCA 90 bp CAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTGCATGTCCGCGTCTTGTaGCGGGTGTGTGGGAAGCCG +
Preference number: 2 (lower is better)
Translates to: QGRLARIHPMESGLVSGVHVRVL*RVCGKP
Trigger: CGGCTTCCCACACACCCGTCACAAGACGCGGACATG...CACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR GCA 90 bp GTACGCCTCAAGGCAGACGGAGGACTTCACTCGGGTCCTGCCCAGCGCTTTCCTTCCCCCTTGCTGCGCTaGTTGGCTGCCCTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: VRLKADGGLHSGPAQRFPSPLLR*LAALSC
Trigger: GCAGCTGAGGGCAGCCAAGCAGCGCAGCAAGGGGGA...AGGAAAGCGCTGGGCAGGACCCGAGTGAAGTCCTCCGTCTGCCTTGAGGCGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR GCA 90 bp GAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCGGGATCCCAGCCTCTaGCAGGAGGGCCTTGTACAT +
Preference number: 2 (lower is better)
Translates to: ETCMSASCDGCVGSRPPVRDPSL*QEGLVH
Trigger: ATGTACAAGGCCCTCCTGGCAGAGGCTGGGATCCCG...CACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CCA 90 bp TGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCCTTGCTGCGCTGCTTaGCTGCCCTCAGCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: CDGCVGSRPPVHLASGYSPCCAA*LPSAAP
Trigger: GGGAGCAGCTGAGGGCAGCCAAGCAGCGCAGCAAGG...CGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CCA 90 bp ACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCAGCTGTAGGGCCAAGACGGGGGTaGCTGCTGCATTCACGCAGG +
Preference number: 2 (lower is better)
Translates to: TALPPRELKLHPRKEPAVGPRRG*LLHSRR
Trigger: CCTGCGTGAATGCAGCAGCCACCCCCGTCTTGGCCC...TACAGCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR GCA 90 bp ACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCAGCTGTAGCTCGCGCCGAGACCTaGATGTCCGCGTCTTGTGAC +
Preference number: 2 (lower is better)
Translates to: TALPPRELKLHPRKEPAVARAET*MSASCD
Trigger: GTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGC...TACAGCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp GACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACAAGGGGACACTGGTGCTaGGTTCAGCAGCCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: DLEAASARHSLGSSSRLTRGHWC*VQQPPG
Trigger: TCCTGGGGGCTGCTGAACCCAGCACCAGTGTCCCCT...TGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp GACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACAGGCACAAGGGGACACTaGTGCTGGGTTCAGCAGCCC +
Preference number: 2 (lower is better)
Translates to: DLEAASARHSLGSSSRLTGTRGH*CWVQQP
Trigger: GGGCTGCTGAACCCAGCACCAGTGTCCCCTTGTGCC...TGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp GAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGCACCCCACAGAAGACTaGGCCCCCTGGGCACAAGGG +
Preference number: 2 (lower is better)
Translates to: ESRCRRTCGQILERVWRGHPTED*APWAQG
Trigger: CCCTTGTGCCCAGGGGGCCCAGTCTTCTGTGGGGTG...CCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR TCA 90 bp ACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTGACAATGCTCCTGGCACGCAATaGCCAGCCTGTCCCCCTTGC +
Preference number: 2 (lower is better)
Translates to: TPGKDPPYGIGPRQWGDNAPGTQ*PACPPC
Trigger: GCAAGGGGGACAGGCTGGTCATTGCGTGCCAGGAGC...ATTGTCACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR TCA 90 bp GAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCCACCCAGTGCTGGACTaGAGACCAGAGAAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: EAASARHSLGSSSRLTLGHPVLD*RPEKVE
Trigger: CTCCACCTTCTCTGGTCTTCAGTCCAGCACTGGGTG...GCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR GCA 90 bp CAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAAGCTGCTCCCTCGCCTaGATCAGCACCAGGTCCCAT +
Preference number: 2 (lower is better)
Translates to: QPQHGTLLGPLPGSHWATSCSLA*ISTRSH
Trigger: ATGGGACCTGGTGCTGATGCAGGCGAGGGAGCAGCT...TGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR GCA 90 bp GAGGCCGCGGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCCGCTTATGGAAATCTaGACTCTTGGTCGGGGGCCT +
Preference number: 2 (lower is better)
Translates to: EAAASRWESRCRRTCGQIPLMEI*TLGRGP
Trigger: AGGCCCCCGACCAAGAGTGCAGATTTCCATAAGCGG...AATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR GCA 90 bp TCCACTAGGCCACCCCATCTCCACCCCCAGGGCCACAAGCCGCTGTGGGCTCCATCGAAGCTCCTCACATaGCTCCCAGAAGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: STRPPHLHPQGHKPLWAPSKLLT*LPEAEV
Trigger: AACCTCAGCTTCTGGGAGGCATGTGAGGAGCTTCGA...TGGAGCCCACAGCGGCTTGTGGCCCTGGGGGTGGAGATGGGGTGGCCTAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR GCA 90 bp GACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACAAGACGGGGGTGGCTaGTGCATTCACGCAGGACGT +
Preference number: 2 (lower is better)
Translates to: DLEAASARHSLGSSSRLTQDGGG*CIHAGR
Trigger: ACGTCCTGCGTGAATGCAGCAGCCACCCCCGTCTTG...TGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp GAGGATCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTAGAAAGTCCATGAAGTaGGCCCGCCCCACGGGGTCC +
Preference number: 2 (lower is better)
Translates to: EDQGRLARIHPMESGLVSRKSMK*ARPTGS
Trigger: GGACCCCGTGGGGCGGGCCCACTTCATGGACTTTCT...ACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR TCA 90 bp CCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTTGCCCAGCGCTTTCCTaGAGTACTCGATCTCCCGCT +
Preference number: 2 (lower is better)
Translates to: PRGSLSTALSWVLFQAHTCPALS*STRSPA
Trigger: AGCGGGAGATCGAGTACTTCAGGAAAGCGCTGGGCA...AGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR GCA 90 bp GAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCAGCACCAGGTCCCATaGGTGGTTGATCTTCTTGTG +
Preference number: 2 (lower is better)
Translates to: ETCMSASCDGCVGSRPPVQHQVP*VVDLLV
Trigger: CACAAGAAGATCAACCACGCATGGGACCTGGTGCTG...CACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR GCA 90 bp TCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACCCGCCTGTGCATCTTaGTTCCGGGTATTCGCTGGC +
Preference number: 2 (lower is better)
Translates to: SLGSSSRLTLGDSGEALGPACAS*FRVFAG
Trigger: GCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGG...TCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp GAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGTCGTGGGGTCCACGCTaGCCGCAGAAACTCAGGTAC +
Preference number: 2 (lower is better)
Translates to: ESRCRRTCGQILERVWRGSWGPR*PQKLRY
Trigger: GTACCTGAGTTTCTGCGGCCAGCGTGGACCCCACGA...CCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CCA 90 bp TCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGATGGACCCATTCCTTCTaGGCAGGGAGGGCTTGCTGG +
Preference number: 2 (lower is better)
Translates to: SLGSSSRLTLGDSGEALGWTHSF*AGRACW
Trigger: CCAGCAAGCCCTCCCTGCCCAGAAGGAATGGGTCCA...TCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR TCA 90 bp CCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGTCCCATGCGTGGTTaGTCTTCTTGTGTAGCCGGT +
Preference number: 2 (lower is better)
Translates to: PRGSLSTALSWVLFQAHTGPMRG*SSCVAG
Trigger: ACCGGCTACACAAGAAGATCAACCACGCATGGGACC...AGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR TCA 90 bp GTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGCACCCAGTGCTGGACTaGAGACCAGAGAAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: VGKQVPAHLWTNSGTRLAHPVLD*RPEKVE
Trigger: CTCCACCTTCTCTGGTCTTCAGTCCAGCACTGGGTG...CGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR TCA 90 bp GAGGATCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTCACCCAGTGCTGGACTaGAGACCAGAGAAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: EDQGRLARIHPMESGLVSHPVLD*RPEKVE
Trigger: CTCCACCTTCTCTGGTCTTCAGTCCAGCACTGGGTG...ACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR GCA 90 bp TCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGAGAAGCCGCCCGCCTGTaGATCTTGCTTCCGGGTATT +
Preference number: 2 (lower is better)
Translates to: SLGSSSRLTLGDSGEALGEAARL*ILLPGI
Trigger: AATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTC...TCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp GAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGACCAGGTCCCATGCGTaGTTGATCTTCTTGTGTAGC +
Preference number: 2 (lower is better)
Translates to: ETCMSASCDGCVGSRPPVTRSHA*LIFLCS
Trigger: GCTACACAAGAAGATCAACCACGCATGGGACCTGGT...CACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CCA 90 bp GGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGATGTGAGCCAGCCGAAGGAGTGCAGGGCTaGGGCTCGAGTGCCGTGGCC +
Preference number: 2 (lower is better)
Translates to: GLLFVCWTLLGVTGCEPAEGVQG*GSSAVA
Trigger: GGCCACGGCACTCGAGCCCCAGCCCTGCACTCCTTC...GGCTGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CCA 90 bp TCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTATTCTGGAACGCGTTTaGCGAGGGAGGAATAGGCGC +
Preference number: 2 (lower is better)
Translates to: SGTPGKDPPYGIGPRQWGILERV*RGRNRR
Trigger: GCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAAT...ACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp GGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGATGTGAGCCAGCCCACCCCACAGAAGACTaGGCCCCCTGGGCACAAGGG +
Preference number: 2 (lower is better)
Translates to: GLLFVCWTLLGVTGCEPAHPTED*APWAQG
Trigger: CCCTTGTGCCCAGGGGGCCCAGTCTTCTGTGGGGTG...GGCTGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp GAGGATCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTAGCTCCCTGTGGCCTTaGTCTCACCTCTCTTCAGGT +
Preference number: 2 (lower is better)
Translates to: EDQGRLARIHPMESGLVSSSLWP*SHLSSG
Trigger: ACCTGAAGAGAGGTGAGACCAAGGCCACAGGGAGCT...ACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp TGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATATGGGCACCCAGTGCTaGACTGAAGACCAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: CVGSRPPVHLASGYSLADMGTQC*TEDQRR
Trigger: CCTTCTCTGGTCTTCAGTCCAGCACTGGGTGCCCAT...ATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp GGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGATGTGAGCCAGCCCTTGTGACGGGTGTGTaGGAAGCCGCCCGCCTGTGC +
Preference number: 2 (lower is better)
Translates to: GLLFVCWTLLGVTGCEPALVTGV*EAARLC
Trigger: GCACAGGCGGGCGGCTTCCCACACACCCGTCACAAG...GGCTGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CAA 90 bp TCAGAGCCAGGGCCCAAGGGTCTTTTATTTGTGTGCTGGACGCTGTaGGGAGTGACTGGATGTGAGCCAGCCCTATGGGTGGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: SEPGPKGLLFVCWTL*GVTGCEPALWVGMA
Trigger: TGCCATCCCCACCCATAGGGCTGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCTTGGGCCCTGGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp CAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAGGCGCAGCTCCGGAAGGCAGATGGGCACCCAGTGCTaGACTGAAGACCAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: QILERVWRGRNRRSSGRQMGTQC*TEDQRR
Trigger: CCTTCTCTGGTCTTCAGTCCAGCACTGGGTGCCCAT...CTGCCTTCCGGAGCTGCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR TCA 90 bp GAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCCGGGTATTCGCTGGCTaGTTTACTGGTTTTAGAGAT +
Preference number: 2 (lower is better)
Translates to: EAASARHSLGSSSRLTLGRVFAG*FTGFRD
Trigger: ATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCG...GCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR GCA 90 bp GAGGATCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTATGAGCATGTATATGTaGAGCTGGGCGTCATCCAGG +
Preference number: 2 (lower is better)
Translates to: EDQGRLARIHPMESGLVSMSMYM*SWASSR
Trigger: CCTGGATGACGCCCAGCTGCACATATACATGCTCAT...ACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR GCA 90 bp GGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGATGTGAGCCAGCCACAAGGGGACACTGGTaGTGGGTTCAGCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: GLLFVCWTLLGVTGCEPATRGHW*WVQQPP
Trigger: TGGGGGCTGCTGAACCCAGCACCAGTGTCCCCTTGT...GGCTGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR TCA 90 bp CCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCAGCTGTACCTTCACCCAGGAGTCCTTCTTCATaGGCATGTATATGTGCAGCT +
Preference number: 2 (lower is better)
Translates to: PPRELKLHPRKEPAVPSPRSPSS*ACICAA
Trigger: AGCTGCACATATACATGCTCATGAAGAAGGACTCCT...GGGTGAAGGTACAGCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR TCA 90 bp TCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTCGGGTATTCGCTGGCTaGTTTACTGGTTTTAGAGAT +
Preference number: 2 (lower is better)
Translates to: SGTPGKDPPYGIGPRQWGRVFAG*FTGFRD
Trigger: ATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCG...ACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CCA 90 bp GGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATATCGATCTCCCGCTTATaGAAATCTGCACTCTTGGTC +
Preference number: 2 (lower is better)
Translates to: GAGAPVDKFWNAFGEGGISISRL*KSALLV
Trigger: GACCAAGAGTGCAGATTTCCATAAGCGGGAGATCGA...TATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CAA 90 bp GCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTGCCCGCCTGTGCATCTaGCTTCCGGGTATTCGCTGG +
Preference number: 3 (lower is better)
Translates to: AERLLDGAELAPRPACPRARLCI*LPGIRW
Trigger: CCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGC...ACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 72 bp GGATTGCTGGGCAGGCACCCCGACACGAGGGGATCGTaGGGTCCACGCTGGCCGCAGAAACTCAGGTACGCC +
Preference number: 3 (lower is better)
Translates to: GLLGRHPDTRGS*GPRWPQKLRYA
Trigger: GGCGTACCTGAGTTTCTGCGGCCAGCGTGGACCCCACGATCCCCTCGTGTCGGGGTGCCTGCCCAGCAATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CAA 90 bp GCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTGAGCTCCCTGTGGCCTaGGTCTCACCTCTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: AERLLDGAELAPRPACPRELPVA*VSPLFR
Trigger: CCTGAAGAGAGGTGAGACCAAGGCCACAGGGAGCTC...ACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CAA 90 bp CAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTGACAGCGGAGAGGCTCTaGGACGGGGCAGAGCTCGCG +
Preference number: 3 (lower is better)
Translates to: QGRLARIHPMESGLVSGVTAERL*DGAELA
Trigger: CGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGT...CACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR TCA 72 bp CCTCCAGGGTCTGCTCCATGGTCCGGCTGTCGATGTTaGCCCAGTGGGCAGCTCCGGGGGCCAGGAACTGCT +
Preference number: 3 (lower is better)
Translates to: PPGSAPWSGCRC*PSGQLRGPGTA
Trigger: AGCAGTTCCTGGCCCCCGGAGCTGCCCACTGGGTCAACATCGACAGCCGGACCATGGAGCAGACCCTGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR TCA 72 bp CAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTGTaGCGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCT +
Preference number: 3 (lower is better)
Translates to: QSSRRDLHVRVL*RVCGKPPACAS
Trigger: AGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR GCA 72 bp ACAGGGGTGGGAAGGAGTGCAGGGCTGGGGCTCGAGTaGCGTGGCCTCCACGTAAACGGGAACACGCGTCTC +
Preference number: 3 (lower is better)
Translates to: TGVGRSAGLGLE*RGLHVNGNTRL
Trigger: GAGACGCGTGTTCCCGTTTACGTGGAGGCCACGGCACTCGAGCCCCAGCCCTGCACTCCTTCCCACCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR GCA 72 bp GAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTaGATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGC +
Preference number: 3 (lower is better)
Translates to: EALGRGRARAET*MSASCDGCVGS
Trigger: GCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 72 bp TTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTaGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTC +
Preference number: 3 (lower is better)
Translates to: FQAHTGRQRRGS*TGQSSRRDLHV
Trigger: GACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR TCA 72 bp TGGCGAGGGAGGAATAGGCGCAGCTCCGGAAGGCAGTaGCCTCGAGGCAGCCTCAGCACGGCACTCTCTTGG +
Preference number: 3 (lower is better)
Translates to: WRGRNRRSSGRQ*PRGSLSTALSW
Trigger: CCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTCACTGCCTTCCGGAGCTGCGCCTATTCCTCCCTCGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 72 bp GGGCCAGGAACTGCTCGTACACGGCATCCACCAGGGTaGGGACCTGGGCCTGCGCTCCATATCGAAGCTCCT +
Preference number: 3 (lower is better)
Translates to: GPGTARTRHPPG*GPGPALHIEAP
Trigger: AGGAGCTTCGATATGGAGCGCAGGCCCAGGTCCCCACCCTGGTGGATGCCGTGTACGAGCAGTTCCTGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CCA 72 bp GTCTGCTCCATGGTCCGGCTGTCGATGTTGACCCAGTaGGCAGCTCCGGGGGCCAGGAACTGCTCGTACACG +
Preference number: 3 (lower is better)
Translates to: VCSMVRLSMLTQ*AAPGARNCSYT
Trigger: CGTGTACGAGCAGTTCCTGGCCCCCGGAGCTGCCCACTGGGTCAACATCGACAGCCGGACCATGGAGCAGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CCA 72 bp CCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTaGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGT +
Preference number: 3 (lower is better)
Translates to: PRPACPRLVTGV*EAARLCILLPG
Trigger: ACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 72 bp CACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTaGGCGACAGCGGAGAGGCTCTTGGACGGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: HGTLLGPLPGSH*ATAERLLDGAE
Trigger: CTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CAA 90 bp GAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGCCCGCCTGTGCATCTaGCTTCCGGGTATTCGCTGG +
Preference number: 3 (lower is better)
Translates to: EAASARHSLGSSSRLTLGARLCI*LPGIRW
Trigger: CCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGC...GCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR TCA 72 bp TGGGTGGGGATGGCACCGCCCTACCGCCGAGAGAGTTaGAGCTGCACCCCCGAAAGGAGCCAGCTGTACCTT +
Preference number: 3 (lower is better)
Translates to: WVGMAPPYRRES*SCTPERSQLYL
Trigger: AAGGTACAGCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCATCCCCACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 72 bp TCTCCACTGAACTCCTTTCCCAGAAAGTCCATGAAGTaGGCCCGCCCCACGGGGTCCTCCAGGAGCTCCCGG +
Preference number: 3 (lower is better)
Translates to: SPLNSFPRKSMK*ARPTGSSRSSR
Trigger: CCGGGAGCTCCTGGAGGACCCCGTGGGGCGGGCCCACTTCATGGACTTTCTGGGAAAGGAGTTCAGTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CCA 72 bp GGTGGGAAGGAGTGCAGGGCTGGGGCTCGAGTGCCGTaGCCTCCACGTAAACGGGAACACGCGTCTCTTCAT +
Preference number: 3 (lower is better)
Translates to: GGKECRAGARVP*PPRKREHASLH
Trigger: ATGAAGAGACGCGTGTTCCCGTTTACGTGGAGGCCACGGCACTCGAGCCCCAGCCCTGCACTCCTTCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR-3UTR CAA 90 bp GGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAACCAGCCTGTCCCCCTaGCTGCGCTGCTTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: GAGAPVDKFWNAFGEGGITSLSP*LRCLAA
Trigger: GGCAGCCAAGCAGCGCAGCAAGGGGGACAGGCTGGT...TATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CCA 72 bp AACTGCTCGTACACGGCATCCACCAGGGTGGGGACCTaGGCCTGCGCTCCATATCGAAGCTCCTCACATGCC +
Preference number: 3 (lower is better)
Translates to: NCSYTASTRVGT*ACAPYRSSSHA
Trigger: GGCATGTGAGGAGCTTCGATATGGAGCGCAGGCCCAGGTCCCCACCCTGGTGGATGCCGTGTACGAGCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CCA 72 bp TGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTaGCGAGGGAGGAATAGGCGCAGCTCCGGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: CRRTCGQILERV*RGRNRRSSGRQ
Trigger: CTGCCTTCCGGAGCTGCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 72 bp GGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTaGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: GLEVGKQVPAHL*TNSGTRLAREE
Trigger: TTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CAA 90 bp GTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGGAGCTCCCTGTGGCCTaGGTCTCACCTCTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: VGKQVPAHLWTNSGTRLAELPVA*VSPLFR
Trigger: CCTGAAGAGAGGTGAGACCAAGGCCACAGGGAGCTC...CGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR TCA 72 bp CGTGGGGGCATTCATGACCCAGTAGGCGTCATTGTCTaGGATCCAGGGATTGCTGGGCAGGCACCCCGACAC +
Preference number: 3 (lower is better)
Translates to: RGGIHDPVGVIV*DPGIAGQAPRH
Trigger: GTGTCGGGGTGCCTGCCCAGCAATCCCTGGATCTCAGACAATGACGCCTACTGGGTCATGAATGCCCCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CCA 72 bp GGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTaGAACGCGTTTGGCGAGGGAGGAATAGGCGCAGCT +
Preference number: 3 (lower is better)
Translates to: GKAGAGAPVDKF*NAFGEGGIGAA
Trigger: AGCTGCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CCA 72 bp CGAAGGAAGACTTGGGCAGGGAGGATCAGGGACGCCTaGCAAGGATCCACCCTATGGAATCGGGCCTCGTCA +
Preference number: 3 (lower is better)
Translates to: RRKTWAGRIRDA*QGSTLWNRASS
Trigger: TGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCTCCCTGCCCAAGTCTTCCTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CAA 90 bp ACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTGACAATCAGCACGGCACTCTCTaGGGTCCTCTTCCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: TPGKDPPYGIGPRQWGDNQHGTL*GPLPGS
Trigger: TGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTG...ATTGTCACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR GCA 72 bp CGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTaGATCTTGCTTCCGGGTATTCGCTGGCTGATTTAC +
Preference number: 3 (lower is better)
Translates to: RLVTGVWEAARL*ILLPGIRWLIY
Trigger: GTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CAA 90 bp ACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTGACAATAGGTCCCATGCGTGGTaGATCTTCTTGTGTAGCCGG +
Preference number: 3 (lower is better)
Translates to: TPGKDPPYGIGPRQWGDNRSHAW*IFLCSR
Trigger: CCGGCTACACAAGAAGATCAACCACGCATGGGACCT...ATTGTCACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR GCA 72 bp CACGCGTCTCTTCATCTCCAGCGGGATCCCAGCCTCTaGCAGGAGGGCCTTGTACATGTCAGACTTCAGGAA +
Preference number: 3 (lower is better)
Translates to: HASLHLQRDPSL*QEGLVHVRLQE
Trigger: TTCCTGAAGTCTGACATGTACAAGGCCCTCCTGGCAGAGGCTGGGATCCCGCTGGAGATGAAGAGACGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR GCA 72 bp GACCTGGGCCTGCGCTCCATATCGAAGCTCCTCACATaGCTCCCAGAAGCTGAGGTTTTCTCCACTGAACTC +
Preference number: 3 (lower is better)
Translates to: DLGLRSISKLLT*LPEAEVFSTEL
Trigger: GAGTTCAGTGGAGAAAACCTCAGCTTCTGGGAGGCATGTGAGGAGCTTCGATATGGAGCGCAGGCCCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR GCA 72 bp GGCTCAGAGCCAGGGCCCAAGGGTCTTTTATTTGTGTaGTGGACGCTGTTGGGAGTGACTGGATGTGAGCCA +
Preference number: 3 (lower is better)
Translates to: GSEPGPKGLLFV*WTLLGVTGCEP
Trigger: TGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCTTGGGCCCTGGCTCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168869.12
ENST00000397770.8
3UTR CCA 72 bp TCAGAGCCAGGGCCCAAGGGTCTTTTATTTGTGTGCTaGACGCTGTTGGGAGTGACTGGATGTGAGCCAGCC +
Preference number: 3 (lower is better)
Translates to: SEPGPKGLLFVC*TLLGVTGCEPA
Trigger: GGCTGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCTTGGGCCCTGGCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR TCA 72 bp CCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTaGTTTACTGGTTTTAGAGATGGGGATGGGCACCCA +
Preference number: 3 (lower is better)
Translates to: PACASCFRVFAG*FTGFRDGDGHP
Trigger: TGGGTGCCCATCCCCATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR TCA 72 bp AGGGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTaGCTGGATGTGAGCCAGCCCTATGGGTGGGGATGG +
Preference number: 3 (lower is better)
Translates to: RVFYLCAGRCWE*LDVSQPYGWGW
Trigger: CCATCCCCACCCATAGGGCTGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR-3UTR CAA 90 bp CCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAGAGATGTCTGAGATCCAGGGATaGCTGGGCAGGCACCCCGAC +
Preference number: 3 (lower is better)
Translates to: PVHLASGYSLADLLVLEMSEIQG*LGRHPD
Trigger: GTCGGGGTGCCTGCCCAGCAATCCCTGGATCTCAGA...CATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CCA 72 bp GGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTaGGGTGACAATGTCAGAGTTGTCTATAAATCGGGG +
Preference number: 3 (lower is better)
Translates to: GKDPPYGIGPRQ*GDNVRVVYKSG
Trigger: CCCCGATTTATAGACAACTCTGACATTGTCACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR GCA 72 bp TTTCCTGAAGTACTCGATCTCCCGCTTATGGAAATCTaGACTCTTGGTCGGGGGCCTGTTCACCAGCCAGTA +
Preference number: 3 (lower is better)
Translates to: FPEVLDLPLMEI*TLGRGPVHQPV
Trigger: TACTGGCTGGTGAACAGGCCCCCGACCAAGAGTGCAGATTTCCATAAGCGGGAGATCGAGTACTTCAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR TCA 90 bp GCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCGTCTGGCCGGAGCATaGGGCTACGGGGGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: AERLLDGAELAPRPACPRRLAGA*GYGGRA
Trigger: TGCGCGACCCCCGTAGCCTCATGCTCCGGCCAGACG...ACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CTAGGCCACCCCATCTCCACCCCCAGGGCCACAAGCCGCTGTGGGCTCCACAGGGCTGCGCTGCTTGGCTaGCCTCAGCTGCTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: LGHPISTPRATSRCGLHRAALLG*PQLLPR
Trigger: GCGAGGGAGCAGCTGAGGGCAGCCAAGCAGCGCAGC...CCTGTGGAGCCCACAGCGGCTTGTGGCCCTGGGGGTGGAGATGGGGTGGCCTAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR GCA 90 bp GAGGCCGCGGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCCCCGCCCTGGACCCTaGTCCAGCACATCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: EAAASRWESRCRRTCGQIPRPGP*SSTSGA
Trigger: GGCCCCCGATGTGCTGGAGCAGGGTCCAGGGCGGGG...AATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGAGGCCGCGGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATCGGCATCCACCAGGGTaGGGACCTGGGCCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: GGRGLEVGKQVPAHLWTNRHPPG*GPGPAL
Trigger: GAGCGCAGGCCCAGGTCCCCACCCTGGTGGATGCCG...ATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGCCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CTAGGCCACCCCATCTCCACCCCCAGGGCCACAAGCCGCTGTGGGCTCCACAGGTCCCCCTTGCTGCGCTaGTTGGCTGCCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGHPISTPRATSRCGLHRSPLLR*LAALSC
Trigger: GCAGCTGAGGGCAGCCAAGCAGCGCAGCAAGGGGGA...CCTGTGGAGCCCACAGCGGCTTGTGGCCCTGGGGGTGGAGATGGGGTGGCCTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR GCA 90 bp GAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGAGGACGGCGCCCAGGTaGAGGGCCTCCTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: ETCMSASCDGCVGSRPPVRTAPR*RASSSE
Trigger: CTCGGAGGAGGAGGCCCTGCACCTGGGCGCCGTCCT...CACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCCCCGAAAGGAGCCAGCTGTACCTTCACCCAGTCTGGGGGACTGGTGAGGCACGCCGCGGCCTCGAGGTaGGAAAGCAGGTGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: PPKGASCTFTQSGGLVRHAAASR*ESRCRR
Trigger: GCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGC...GTGCCTCACCAGTCCCCCAGACTGGGTGAAGGTACAGCTGGCTCCTTTCGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGGAGGGAGGGAGGCTGTGCACCCCACAGAAGACTGGGCCCCCTGGGCACAAGGCCCTATGGGTGGGGATaGCACCGCCCTACCGCCGAG +
Preference number: 4 (lower is better)
Translates to: WREGGCAPHRRLGPLGTRPYGWG*HRPTAE
Trigger: CTCGGCGGTAGGGCGGTGCCATCCCCACCCATAGGG...CCTTGTGCCCAGGGGGCCCAGTCTTCTGTGGGGTGCACAGCCTCCCTCCCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GGCTGCCCTCAGCTGCTCCCTCGCCTGCATCAGCACCAGGTCCCATGCGTGGTTCCCTGGTCGGGGTCCTaGATGCTCACGACCACCCGC +
Preference number: 4 (lower is better)
Translates to: GCPQLLPRLHQHQVPCVVPWSGS*MLTTTR
Trigger: GCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGG...AACCACGCATGGGACCTGGTGCTGATGCAGGCGAGGGAGCAGCTGAGGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR GCA 90 bp ACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATAGGACGGCGCCCAGGTaGAGGGCCTCCTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: TCMSASCDGCVGSRPPVHRTAPR*RASSSE
Trigger: CTCGGAGGAGGAGGCCCTGCACCTGGGCGCCGTCCT...ATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGGTGACCAGCAGGCGCTaGCTCCGCATCTTCACGCCC +
Preference number: 4 (lower is better)
Translates to: PRPACPRLVTGVWEAARLVTSRR*LRIFTP
Trigger: GGGCGTGAAGATGCGGAGCCAGCGCCTGCTGGTCAC...CAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp ACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCCTGCCTGTCACCGCGTaGGGAATGACGGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: TLGDSGEALGRGRARAETLPVTA*GMTVTS
Trigger: GCTGGTCACCGTCATTCCCCACGCGGTGACAGGCAG...GGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGCCTTGCTGCGCTGCTTaGCTGCCCTCAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PRPACPRLVTGVWEAARLPCCAA*LPSAAP
Trigger: GGGAGCAGCTGAGGGCAGCCAAGCAGCGCAGCAAGG...CAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp ACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCACCAGGGTGGGGACCTaGGCCTGCGCTCCATATCGA +
Preference number: 4 (lower is better)
Translates to: TLGDSGEALGRGRARAETTRVGT*ACAPYR
Trigger: TCGATATGGAGCGCAGGCCCAGGTCCCCACCCTGGT...GGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCACCCCCAGGGCCACAAGCCGCTGTGGGCTCCACAGGGGTGGGAAGGAGTGCAAGGGGACACTGGTGCTaGGTTCAGCAGCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPPGPQAAVGSTGVGRSARGHWC*VQQPPG
Trigger: TCCTGGGGGCTGCTGAACCCAGCACCAGTGTCCCCT...TGCACTCCTTCCCACCCCTGTGGAGCCCACAGCGGCTTGTGGCCCTGGGGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR CCA 90 bp CGACAGCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCACCCCACAGAAGACTaGGCCCCCTGGGCACAAGGG +
Preference number: 4 (lower is better)
Translates to: RQRRGSWTGQSSRRDLHVHPTED*APWAQG
Trigger: CCCTTGTGCCCAGGGGGCCCAGTCTTCTGTGGGGTG...GACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGAGGCCGCGGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATCTTGTGACGGGTGTGTaGGAAGCCGCCCGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: GGRGLEVGKQVPAHLWTNLVTGV*EAARLC
Trigger: GCACAGGCGGGCGGCTTCCCACACACCCGTCACAAG...ATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCCCTATGGGTGGGGATaGCACCGCCCTACCGCCGAG +
Preference number: 4 (lower is better)
Translates to: WVLFQAHTGRQRRGSWTGPYGWG*HRPTAE
Trigger: CTCGGCGGTAGGGCGGTGCCATCCCCACCCATAGGG...CCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CAA 72 bp CCCTCCAGGGTCTGCTCCATGGTCCGGCTGTCGATGTaGACCCAGTGGGCAGCTCCGGGGGCCAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: PSRVCSMVRLSM*TQWAAPGARNC
Trigger: GCAGTTCCTGGCCCCCGGAGCTGCCCACTGGGTCAACATCGACAGCCGGACCATGGAGCAGACCCTGGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR TCA 90 bp GAAGACTGGGCCCCCTGGGCACAAGGGGACACTGGTGCTGGGTTCAGCAGCCCCGGAGCTCCCGGAAGCTaGAGCCCCATCTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: EDWAPWAQGDTGAGFSSPGAPGS*SPISPH
Trigger: GTGTGGAGAGATGGGGCTTCAGCTTCCGGGAGCTCC...GGGGCTGCTGAACCCAGCACCAGTGTCCCCTTGTGCCCAGGGGGCCCAGTCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTTCCCAGAAAGTCCATaGAGTGGGCCCGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: PRPACPRLVTGVWEAARLFPESP*SGPAPR
Trigger: CCGTGGGGCGGGCCCACTTCATGGACTTTCTGGGAA...CAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp TGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCGTCTGGCCGGAGCATaGGGCTACGGGGGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: CDGCVGSRPPVHLASGYSRLAGA*GYGGRA
Trigger: TGCGCGACCCCCGTAGCCTCATGCTCCGGCCAGACG...CGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCTGCGCTGCTTGGCTaGCCTCAGCTGCTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: AELAPRPACPRLVTGVWEAALLG*PQLLPR
Trigger: GCGAGGGAGCAGCTGAGGGCAGCCAAGCAGCGCAGC...TTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCCCAGCCTGTCCCCCTTaGTGCGCTGCTTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: EAASARHSLGSSSRLTLGPACPP*CAAWLP
Trigger: GGGCAGCCAAGCAGCGCAGCAAGGGGGACAGGCTGG...GCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp ACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCCAGCCTGTCCCCCTTaGTGCGCTGCTTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TCMSASCDGCVGSRPPVHPACPP*CAAWLP
Trigger: GGGCAGCCAAGCAGCGCAGCAAGGGGGACAGGCTGG...ATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GGGCACAAGGGGACACTGGTGCTGGGTTCAGCAGCCCCCAGGACCTGGGCCAAGGTGGGGACCTGGGCCTaGGCTCCATATCGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GHKGTLVLGSAAPRTWAKVGTWA*APYRSS
Trigger: GGAGCTTCGATATGGAGCGCAGGCCCAGGTCCCCAC...CTTGGCCCAGGTCCTGGGGGCTGCTGAACCCAGCACCAGTGTCCCCTTGTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TGGAGGGAGGGAGGCTGTGCACCCCACAGAAGACTGGGCCCCCTGGGCACAAGGGTGGGGACCTGGGCCTaGGCTCCATATCGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: WREGGCAPHRRLGPLGTRVGTWA*APYRSS
Trigger: GGAGCTTCGATATGGAGCGCAGGCCCAGGTCCCCAC...CCTTGTGCCCAGGGGGCCCAGTCTTCTGTGGGGTGCACAGCCTCCCTCCCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GATGGGCCAGGTCCACTAGGCCACCCCATCTCCACCCCCAGGGCCACAAGCCGCCGGGATCCCAGCCTCTaGCAGGAGGGCCTTGTACAT +
Preference number: 4 (lower is better)
Translates to: DGPGPLGHPISTPRATSRRDPSL*QEGLVH
Trigger: ATGTACAAGGCCCTCCTGGCAGAGGCTGGGATCCCG...GCGGCTTGTGGCCCTGGGGGTGGAGATGGGGTGGCCTAGTGGACCTGGCCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR GCA 90 bp AAGGGGACACTGGTGCTGGGTTCAGCAGCCCCCAGGACCTGGGCCAAGACGGGGGAGGGAGGGAGGCTGTaGACCCCACAGAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: KGTLVLGSAAPRTWAKTGEGGRL*TPQKTG
Trigger: CCCAGTCTTCTGTGGGGTGCACAGCCTCCCTCCCTC...CCCCGTCTTGGCCCAGGTCCTGGGGGCTGCTGAACCCAGCACCAGTGTCCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GGAGGCCGCGGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATGAGGGAGGGAGGCTGTaGACCCCACAGAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: GGRGLEVGKQVPAHLWTNEGGRL*TPQKTG
Trigger: CCCAGTCTTCTGTGGGGTGCACAGCCTCCCTCCCTC...ATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp AAGGGGACACTGGTGCTGGGTTCAGCAGCCCCCAGGACCTGGGCCAAGACGGGGGCTCGCGCCGAGACCTaGATGTCCGCGTCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: KGTLVLGSAAPRTWAKTGARAET*MSASCD
Trigger: GTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGC...CCCCGTCTTGGCCCAGGTCCTGGGGGCTGCTGAACCCAGCACCAGTGTCCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CGACAGCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCGCTCGCGCCGAGACCTaGATGTCCGCGTCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: RQRRGSWTGQSSRRDLHVARAET*MSASCD
Trigger: GTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGC...GACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATCCCCGCCCTGGACCCTaGTCCAGCACATCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: CVGSRPPVHLASGYSLADPRPGP*SSTSGA
Trigger: GGCCCCCGATGTGCTGGAGCAGGGTCCAGGGCGGGG...ATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGCTGCCCTCAGCTGCTCCCTCGCCTGCATCAGCACCAGGTCCCATGCGTGGTTCCTTGCTGCGCTGCTTaGCTGCCCTCAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GCPQLLPRLHQHQVPCVVPCCAA*LPSAAP
Trigger: GGGAGCAGCTGAGGGCAGCCAAGCAGCGCAGCAAGG...AACCACGCATGGGACCTGGTGCTGATGCAGGCGAGGGAGCAGCTGAGGGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR CCA 90 bp GATGGGCCAGGTCCACTAGGCCACCCCATCTCCACCCCCAGGGCCACAAGCCGCAGATCCAGGGATTGCTaGGCAGGCACCCCGACACGA +
Preference number: 4 (lower is better)
Translates to: DGPGPLGHPISTPRATSRRSRDC*AGTPTR
Trigger: TCGTGTCGGGGTGCCTGCCCAGCAATCCCTGGATCT...GCGGCTTGTGGCCCTGGGGGTGGAGATGGGGTGGCCTAGTGGACCTGGCCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR CCA 90 bp GGAGGCCGCGGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATAGAAAGTCCATGAAGTaGGCCCGCCCCACGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GGRGLEVGKQVPAHLWTNRKSMK*ARPTGS
Trigger: GGACCCCGTGGGGCGGGCCCACTTCATGGACTTTCT...ATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGGAGGGAGGGAGGCTGTGCACCCCACAGAAGACTGGGCCCCCTGGGCACAAGGACCAGGGTGGGGACCTaGGCCTGCGCTCCATATCGA +
Preference number: 4 (lower is better)
Translates to: WREGGCAPHRRLGPLGTRTRVGT*ACAPYR
Trigger: TCGATATGGAGCGCAGGCCCAGGTCCCCACCCTGGT...CCTTGTGCCCAGGGGGCCCAGTCTTCTGTGGGGTGCACAGCCTCCCTCCCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGGCACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCAGCTCGATGTTGACCCAGTaGGCAGCTCCGGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WHRPTAERVEAAPPKGASSMLTQ*AAPGAR
Trigger: CCTGGCCCCCGGAGCTGCCCACTGGGTCAACATCGA...GCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCCCCGAAAGGAGCCAGCTGTACCTTCACCCAGTCTGGGGGACTGGTGAGGCACGAAGGAGTGCAGGGCTaGGGCTCGAGTGCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: PPKGASCTFTQSGGLVRHEGVQG*GSSAVA
Trigger: GGCCACGGCACTCGAGCCCCAGCCCTGCACTCCTTC...GTGCCTCACCAGTCCCCCAGACTGGGTGAAGGTACAGCTGGCTCCTTTCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGGGGCCAAGACGGGGGTaGCTGCTGCATTCACGCAGG +
Preference number: 4 (lower is better)
Translates to: ETCMSASCDGCVGSRPPVGPRRG*LLHSRR
Trigger: CCTGCGTGAATGCAGCAGCCACCCCCGTCTTGGCCC...CACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTGTGACGGGGCCAAGACGGGGGTaGCTGCTGCATTCACGCAGG +
Preference number: 4 (lower is better)
Translates to: LLDGAELAPRPACPRLVTGPRRG*LLHSRR
Trigger: CCTGCGTGAATGCAGCAGCCACCCCCGTCTTGGCCC...CGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGGGCACAAGGGGACACTaGTGCTGGGTTCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PRPACPRLVTGVWEAARLGTRGH*CWVQQP
Trigger: GGGCTGCTGAACCCAGCACCAGTGTCCCCTTGTGCC...CAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCGGCACAAGGGGACACTaGTGCTGGGTTCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GSSSRLTLGDSGEALGRGGTRGH*CWVQQP
Trigger: GGGCTGCTGAACCCAGCACCAGTGTCCCCTTGTGCC...GCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGGCCGCGGCCTCGAGGTaGGAAAGCAGGTGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: ESRCRRTCGQILERVWRGAAASR*ESRCRR
Trigger: GCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGC...CCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCCCCTATGGGTGGGGATaGCACCGCCCTACCGCCGAG +
Preference number: 4 (lower is better)
Translates to: EAASARHSLGSSSRLTLGPYGWG*HRPTAE
Trigger: CTCGGCGGTAGGGCGGTGCCATCCCCACCCATAGGG...GCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGCTGCCCTCAGCTGCTCCCTCGCCTGCATCAGCACCAGGTCCCATGCGTGGTTAGCCAGCCCTATGGGTaGGGATGGCACCGCCCTACC +
Preference number: 4 (lower is better)
Translates to: GCPQLLPRLHQHQVPCVVSQPYG*GWHRPT
Trigger: GGTAGGGCGGTGCCATCCCCACCCATAGGGCTGGCT...AACCACGCATGGGACCTGGTGCTGATGCAGGCGAGGGAGCAGCTGAGGGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR CCA 90 bp GAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGTGTGAGCCAGCCCTATaGGTGGGGATGGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: ETCMSASCDGCVGSRPPVCEPAL*VGMAPP
Trigger: GGGCGGTGCCATCCCCACCCATAGGGCTGGCTCACA...CACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGGTAGGGCGTCTCGTCTaGCCGGAGCATGAGGCTACG +
Preference number: 4 (lower is better)
Translates to: PRPACPRLVTGVWEAARLVGRLV*PEHEAT
Trigger: CGTAGCCTCATGCTCCGGCCAGACGAGACGCCCTAC...CAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
3UTR CAA 72 bp CTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTaGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGT +
Preference number: 4 (lower is better)
Translates to: LPGSHWATAERL*DGAELAPRPAC
Trigger: ACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp ACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCCCAGCGCTTTCCTaGAGTACTCGATCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: TLGDSGEALGRGRARAETCPALS*STRSPA
Trigger: AGCGGGAGATCGAGTACTTCAGGAAAGCGCTGGGCA...GGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTGTGACGTTCCCAGAAAGTCCATaGAGTGGGCCCGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: LLDGAELAPRPACPRLVTFPESP*SGPAPR
Trigger: CCGTGGGGCGGGCCCACTTCATGGACTTTCTGGGAA...CGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CCCCCGAAAGGAGCCAGCTGTACCTTCACCCAGTCTGGGGGACTGGTGAGGCACTCCGGCTGTCGATGTTaGCCCAGTGGGCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PPKGASCTFTQSGGLVRHSGCRC*PSGQLR
Trigger: CCGGAGCTGCCCACTGGGTCAACATCGACAGCCGGA...GTGCCTCACCAGTCCCCCAGACTGGGTGAAGGTACAGCTGGCTCCTTTCGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CCACCCCCAGGGCCACAAGCCGCTGTGGGCTCCACAGGGGTGGGAAGGAGTGCACACCCAGTGCTGGACTaGAGACCAGAGAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PPPGPQAAVGSTGVGRSAHPVLD*RPEKVE
Trigger: CTCCACCTTCTCTGGTCTTCAGTCCAGCACTGGGTG...TGCACTCCTTCCCACCCCTGTGGAGCCCACAGCGGCTTGTGGCCCTGGGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR TCA 90 bp GAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCAGCTCCGGAAGGCAGTaGCCTCGAGGCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: EAASARHSLGSSSRLTLGSSGRQ*PRGSLS
Trigger: GCTGAGGCTGCCTCGAGGTCACTGCCTTCCGGAGCT...GCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CACAGAAGACTGGGCCCCCTGGGCACAAGGGGACACTGGTGCTGGGTTCAGCAGAGCTCCGGAAGGCAGTaGCCTCGAGGCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HRRLGPLGTRGHWCWVQQSSGRQ*PRGSLS
Trigger: GCTGAGGCTGCCTCGAGGTCACTGCCTTCCGGAGCT...CTGCTGAACCCAGCACCAGTGTCCCCTTGTGCCCAGGGGGCCCAGTCTTCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCCTCAAGGCAGACGGAGGACTTCACTCGGGTCCTGCCCAGCGCTTTCCTGAAGCGCACCTTCCTCAGATaGGGCATCTGCGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: ASRQTEDFTRVLPSAFLKRTFLR*GICARG
Trigger: CCCCCGGGCGCAGATGCCGCATCTGAGGAAGGTGCG...CTTCAGGAAAGCGCTGGGCAGGACCCGAGTGAAGTCCTCCGTCTGCCTTGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR GCA 90 bp GAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGGTCGGGGTCCTGCATaGTCACGACCACCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: EAASARHSLGSSSRLTLGGRGPA*SRPPAP
Trigger: TGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACC...GCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTCCCTGGTCGGGGTCCTaGATGCTCACGACCACCCGC +
Preference number: 4 (lower is better)
Translates to: SGTPGKDPPYGIGPRQWGPWSGS*MLTTTR
Trigger: GCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGG...ACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGAGCTGCTCCCTCGCCTaGATCAGCACCAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: PRPACPRLVTGVWEAARLSCSLA*ISTRSH
Trigger: ATGGGACCTGGTGCTGATGCAGGCGAGGGAGCAGCT...CAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCTGCGCTGCTTGGCTaGCCTCAGCTGCTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: QPQHGTLLGPLPGSHWATAALLG*PQLLPR
Trigger: GCGAGGGAGCAGCTGAGGGCAGCCAAGCAGCGCAGC...TGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGCCTGTCCCCCTTGCTaGGCTGCTTGGCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: EAASARHSLGSSSRLTLGACPPC*AAWLPS
Trigger: TGAGGGCAGCCAAGCAGCGCAGCAAGGGGGACAGGC...GCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp AGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCCAGCCTGTCCCCCTTaGTGCGCTGCTTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SLSTALSWVLFQAHTGRQPACPP*CAAWLP
Trigger: GGGCAGCCAAGCAGCGCAGCAAGGGGGACAGGCTGG...CTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TGGAGGGAGGGAGGCTGTGCACCCCACAGAAGACTGGGCCCCCTGGGCACAAGGCTGAGATCCAGGGATTaGTGGGCAGGCACCCCGACA +
Preference number: 4 (lower is better)
Translates to: WREGGCAPHRRLGPLGTRLRSRD*WAGTPT
Trigger: TGTCGGGGTGCCTGCCCAGCAATCCCTGGATCTCAG...CCTTGTGCCCAGGGGGCCCAGTCTTCTGTGGGGTGCACAGCCTCCCTCCCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCAGTGACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCGGGCTGGGGCTCGAGTaGCGTGGCCTCCACGTAAAC +
Preference number: 4 (lower is better)
Translates to: AVTSRQPQHGTLLGPLPGGLGLE*RGLHVN
Trigger: GTTTACGTGGAGGCCACGGCACTCGAGCCCCAGCCC...GCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGGGCTGGGGCTCGAGTaGCGTGGCCTCCACGTAAAC +
Preference number: 4 (lower is better)
Translates to: AELAPRPACPRLVTGVWEGLGLE*RGLHVN
Trigger: GTTTACGTGGAGGCCACGGCACTCGAGCCCCAGCCC...TTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTGGGATGGGCACCCAGTaGTGGACTGAAGACCAGAGA +
Preference number: 4 (lower is better)
Translates to: AERLLDGAELAPRPACPRGMGTQ*WTEDQR
Trigger: TCTCTGGTCTTCAGTCCAGCACTGGGTGCCCATCCC...ACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp ACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCGAAGCCGCCCGCCTGTaGATCTTGCTTCCGGGTATT +
Preference number: 4 (lower is better)
Translates to: TLGDSGEALGRGRARAETEAARL*ILLPGI
Trigger: AATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTC...GGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TGGCACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCAGCGCTCGCGCCGAGACCTaGATGTCCGCGTCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: WHRPTAERVEAAPPKGASARAET*MSASCD
Trigger: GTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGC...GCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCTGCCTGTCACCGCGTaGGGAATGACGGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: ETCMSASCDGCVGSRPPVLPVTA*GMTVTS
Trigger: GCTGGTCACCGTCATTCCCCACGCGGTGACAGGCAG...CACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCAGGACCTGGGCCAAGACGGGGGTGGCTGCTGCATTCACGCAGGACGTTGAGCCTGCCTGTCACCGCGTaGGGAATGACGGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: PGPGPRRGWLLHSRRTLSLPVTA*GMTVTS
Trigger: GCTGGTCACCGTCATTCCCCACGCGGTGACAGGCAG...GCTCAACGTCCTGCGTGAATGCAGCAGCCACCCCCGTCTTGGCCCAGGTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CACAGAAGACTGGGCCCCCTGGGCACAAGGGGACACTGGTGCTGGGTTCAGCAGCCTTGCTGCGCTGCTTaGCTGCCCTCAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: HRRLGPLGTRGHWCWVQQPCCAA*LPSAAP
Trigger: GGGAGCAGCTGAGGGCAGCCAAGCAGCGCAGCAAGG...CTGCTGAACCCAGCACCAGTGTCCCCTTGTGCCCAGGGGGCCCAGTCTTCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGACACGAGGGGATCGTaGGGTCCACGCTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: QPQHGTLLGPLPGSHWATDTRGS*GPRWPQ
Trigger: CTGCGGCCAGCGTGGACCCCACGATCCCCTCGTGTC...TGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TTGGGGGATGGGGAGCAAGGCCAGCTCACGAAGGAAGACTTGGGCAGGGAGGATCGGCATCCACCAGGGTaGGGACCTGGGCCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: LGDGEQGQLTKEDLGREDRHPPG*GPGPAL
Trigger: GAGCGCAGGCCCAGGTCCCCACCCTGGTGGATGCCG...ATCCTCCCTGCCCAAGTCTTCCTTCGTGAGCTGGCCTTGCTCCCCATCCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp AAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGCGGCATCCACCAGGGTaGGGACCTGGGCCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: KQVPAHLWTNSGTRLARERHPPG*GPGPAL
Trigger: GAGCGCAGGCCCAGGTCCCCACCCTGGTGGATGCCG...CTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp ACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCGATGTTGACCCAGTaGGCAGCTCCGGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TALSWVLFQAHTGRQRRGSMLTQ*AAPGAR
Trigger: CCTGGCCCCCGGAGCTGCCCACTGGGTCAACATCGA...GCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GCAGTGACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCGGCCACAAGCCGCTGTaGGCTCCACAGGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: AVTSRQPQHGTLLGPLPGGHKPL*APQGWE
Trigger: TTCCCACCCCTGTGGAGCCCACAGCGGCTTGTGGCC...GCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGAGGCCGCGGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATCTGCAGGGACTAGAGTaGCAGATGGGCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GGRGLEVGKQVPAHLWTNLQGLE*QMGQVH
Trigger: GTGGACCTGGCCCATCTGCCACTCTAGTCCCTGCAG...ATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGATGGCACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCGAAGACTGGGCCCCCTaGGCACAAGGGGACACTGGT +
Preference number: 4 (lower is better)
Translates to: GWHRPTAERVEAAPPKGAEDWAP*AQGDTG
Trigger: ACCAGTGTCCCCTTGTGCCCAGGGGGCCCAGTCTTC...GGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp ACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCAATGAACCCCCTCCCTaGGAATCCACACCTGGACCC +
Preference number: 4 (lower is better)
Translates to: TLGDSGEALGRGRARAETNEPPP*ESTPGP
Trigger: GGGTCCAGGTGTGGATTCCCAGGGAGGGGGTTCATT...GGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACCAGCGGAGAGGCTCTTaGACGGGGCAGAGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: LLGPLPGSHWATAERLLDQRRGS*TGQSSR
Trigger: GCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTG...GTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGAGGATCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGCAGCGGAGAGGCTCTTaGACGGGGCAGAGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: GGSGTPGKDPPYGIGPRQQRRGS*TGQSSR
Trigger: GCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTG...CTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCTTCCAGGCTCACACTaGGCGACAGCGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: WVLFQAHTGRQRRGSWTGLPGSH*ATAERL
Trigger: GAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAG...CCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGATGGCACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCCTTCCAGGCTCACACTaGGCGACAGCGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GWHRPTAERVEAAPPKGALPGSH*ATAERL
Trigger: GAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAG...GGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTAGCACGGCACTCTCTTaGGTCCTCTTCCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: AERLLDGAELAPRPACPRSTALS*VLFQAH
Trigger: GTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCT...ACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGCTGCCCTCAGCTGCTCCCTCGCCTGCATCAGCACCAGGTCCCATGCGTGGTTGAGGCACTTGGGGGATaGGGAGCAAGGCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: GCPQLLPRLHQHQVPCVVEALGG*GARPAH
Trigger: GTGAGCTGGCCTTGCTCCCCATCCCCCAAGTGCCTC...AACCACGCATGGGACCTGGTGCTGATGCAGGCGAGGGAGCAGCTGAGGGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR CCA 90 bp CCCCCGAAAGGAGCCAGCTGTACCTTCACCCAGTCTGGGGGACTGGTGAGGCACAGCCAGCCCTATGGGTaGGGATGGCACCGCCCTACC +
Preference number: 4 (lower is better)
Translates to: PPKGASCTFTQSGGLVRHSQPYG*GWHRPT
Trigger: GGTAGGGCGGTGCCATCCCCACCCATAGGGCTGGCT...GTGCCTCACCAGTCCCCCAGACTGGGTGAAGGTACAGCTGGCTCCTTTCGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
3UTR CAA 72 bp GCAGTGACCTCGAGGCAGCCTCAGCACGGCACTCTCTaGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCG +
Preference number: 4 (lower is better)
Translates to: AVTSRQPQHGTL*GPLPGSHWATA
Trigger: CGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTCACTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp AGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGGCTCCTGGCACGCAATaGCCAGCCTGTCCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SLSTALSWVLFQAHTGRQAPGTQ*PACPPC
Trigger: GCAAGGGGGACAGGCTGGTCATTGCGTGCCAGGAGC...CTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGCTCCTGGCACGCAATaGCCAGCCTGTCCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PRGSLSTALSWVLFQAHTAPGTQ*PACPPC
Trigger: GCAAGGGGGACAGGCTGGTCATTGCGTGCCAGGAGC...AGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGGAGCTCCCGGAAGCTaGAGCCCCATCTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: EAASARHSLGSSSRLTLGGAPGS*SPISPH
Trigger: GTGTGGAGAGATGGGGCTTCAGCTTCCGGGAGCTCC...GCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACATCCGGCTGTCGATGTTaGCCCAGTGGGCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: DLEAASARHSLGSSSRLTSGCRC*PSGQLR
Trigger: CCGGAGCTGCCCACTGGGTCAACATCGACAGCCGGA...TGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGACGCTGTTGGGAGTaGCTGGATGTGAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ASARHSLGSSSRLTLGDSGRCWE*LDVSQP
Trigger: GGGCTGGCTCACATCCAGTCACTCCCAACAGCGTCC...GCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GAGGATCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTCGCACCTTCCTCAGATaGGGCATCTGCGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: EDQGRLARIHPMESGLVSRTFLR*GICARG
Trigger: CCCCCGGGCGCAGATGCCGCATCTGAGGAAGGTGCG...ACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000168869.12
ENST00000316163.9
CDS-3UTR GCA 90 bp GGAGGATCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGGGTCGGGGTCCTGCATaGTCACGACCACCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGSGTPGKDPPYGIGPRQGRGPA*SRPPAP
Trigger: TGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACC...CTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGGGTCGGGGTCCTGCATaGTCACGACCACCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: CDGCVGSRPPVHLASGYSGRGPA*SRPPAP
Trigger: TGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACC...CGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGTTCTGGGCCAACCACTaGACGACGTCGCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: WVLFQAHTGRQRRGSWTGFWANH*TTSLPV
Trigger: GACAGGCAGCGACGTCGTGCAGTGGTTGGCCCAGAA...CCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTTCCCCCTTGCTGCGCTaGTTGGCTGCCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGTPGKDPPYGIGPRQWGSPLLR*LAALSC
Trigger: GCAGCTGAGGGCAGCCAAGCAGCGCAGCAAGGGGGA...ACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp ACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCAGCTGTAGCCTGTCCCCCTTGCTaGGCTGCTTGGCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TALPPRELKLHPRKEPAVACPPC*AAWLPS
Trigger: TGAGGGCAGCCAAGCAGCGCAGCAAGGGGGACAGGC...TACAGCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCGGGATCCCAGCCTCTaGCAGGAGGGCCTTGTACAT +
Preference number: 4 (lower is better)
Translates to: WVLFQAHTGRQRRGSWTGRDPSL*QEGLVH
Trigger: ATGTACAAGGCCCTCCTGGCAGAGGCTGGGATCCCG...CCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAGGGCTGGGGCTCGAGTaGCGTGGCCTCCACGTAAAC +
Preference number: 4 (lower is better)
Translates to: AGAGAPVDKFWNAFGEGGGLGLE*RGLHVN
Trigger: GTTTACGTGGAGGCCACGGCACTCGAGCCCCAGCCC...TCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCAAGACGGGGGTGGCTaGTGCATTCACGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: WVLFQAHTGRQRRGSWTGQDGGG*CIHAGR
Trigger: ACGTCCTGCGTGAATGCAGCAGCCACCCCCGTCTTG...CCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGCAAGACGGGGGTGGCTaGTGCATTCACGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: ASCDGCVGSRPPVHLASGQDGGG*CIHAGR
Trigger: ACGTCCTGCGTGAATGCAGCAGCCACCCCCGTCTTG...CCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CCAGGACCTGGGCCAAGACGGGGGTGGCTGCTGCATTCACGCAGGACGTTGAGCACAAGGGGACACTGGTaGTGGGTTCAGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PGPGPRRGWLLHSRRTLSTRGHW*WVQQPP
Trigger: TGGGGGCTGCTGAACCCAGCACCAGTGTCCCCTTGT...GCTCAACGTCCTGCGTGAATGCAGCAGCCACCCCCGTCTTGGCCCAGGTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGACAAGGGGACACTGGTaGTGGGTTCAGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ASCDGCVGSRPPVHLASGTRGHW*WVQQPP
Trigger: TGGGGGCTGCTGAACCCAGCACCAGTGTCCCCTTGT...CCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCGAAGCCGCCCGCCTGTaGATCTTGCTTCCGGGTATT +
Preference number: 4 (lower is better)
Translates to: GSSSRLTLGDSGEALGRGEAARL*ILLPGI
Trigger: AATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTC...GCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCCGCATCTTCACGCCCTaGTCGGGGTCCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: EAASARHSLGSSSRLTLGRIFTP*SGSCML
Trigger: GAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCG...GCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCAGGACCTGGGCCAAGACGGGGGTGGCTGCTGCATTCACGCAGGACGTTGAGCTCGTGGGGTCCACGCTaGCCGCAGAAACTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PGPGPRRGWLLHSRRTLSSWGPR*PQKLRY
Trigger: GTACCTGAGTTTCTGCGGCCAGCGTGGACCCCACGA...GCTCAACGTCCTGCGTGAATGCAGCAGCCACCCCCGTCTTGGCCCAGGTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GAGGCCGCGGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATTTCGTGGGGTCCACGCTaGCCGCAGAAACTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: EAAASRWESRCRRTCGQISWGPR*PQKLRY
Trigger: GTACCTGAGTTTCTGCGGCCAGCGTGGACCCCACGA...AATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGGACACGAGGGGATCGTaGGGTCCACGCTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: VGKQVPAHLWTNSGTRLADTRGS*GPRWPQ
Trigger: CTGCGGCCAGCGTGGACCCCACGATCCCCTCGTGTC...CGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGAGACACGAGGGGATCGTaGGGTCCACGCTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SLGSSSRLTLGDSGEALGDTRGS*GPRWPQ
Trigger: CTGCGGCCAGCGTGGACCCCACGATCCCCTCGTGTC...TCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp ACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCACCAGGGTGGGGACCTaGGCCTGCGCTCCATATCGA +
Preference number: 4 (lower is better)
Translates to: TALSWVLFQAHTGRQRRGTRVGT*ACAPYR
Trigger: TCGATATGGAGCGCAGGCCCAGGTCCCCACCCTGGT...GCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp ATCCACCAGGGTGGGGACCTGGGCCTGCGCTCCATATCGAAGCTCCTCACATGCGGCCACAAGCCGCTGTaGGCTCCACAGGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: IHQGGDLGLRSISKLLTCGHKPL*APQGWE
Trigger: TTCCCACCCCTGTGGAGCCCACAGCGGCTTGTGGCC...GCATGTGAGGAGCTTCGATATGGAGCGCAGGCCCAGGTCCCCACCCTGGTGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR CCA 90 bp AGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGGGCCACAAGCCGCTGTaGGCTCCACAGGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SRCRRTCGQILERVWRGRGHKPL*APQGWE
Trigger: TTCCCACCCCTGTGGAGCCCACAGCGGCTTGTGGCC...CCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCCCCGAAAGGAGCCAGCTGTACCTTCACCCAGTCTGGGGGACTGGTGAGGCACAGGGGACACTGGTGCTaGGTTCAGCAGCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPKGASCTFTQSGGLVRHRGHWC*VQQPPG
Trigger: TCCTGGGGGCTGCTGAACCCAGCACCAGTGTCCCCT...GTGCCTCACCAGTCCCCCAGACTGGGTGAAGGTACAGCTGGCTCCTTTCGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGATGGCACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCTGGACCCATTCCTTCTaGGCAGGGAGGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GWHRPTAERVEAAPPKGAWTHSF*AGRACW
Trigger: CCAGCAAGCCCTCCCTGCCCAGAAGGAATGGGTCCA...GGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGGCACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCAGCTGGACCCATTCCTTCTaGGCAGGGAGGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: WHRPTAERVEAAPPKGASWTHSF*AGRACW
Trigger: CCAGCAAGCCCTCCCTGCCCAGAAGGAATGGGTCCA...GCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTATGGGCACCCAGTGCTaGACTGAAGACCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: AERLLDGAELAPRPACPRMGTQC*TEDQRR
Trigger: CCTTCTCTGGTCTTCAGTCCAGCACTGGGTGCCCAT...ACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CTTGGGGGATGGGGAGCAAGGCCAGCTCACGAAGGAAGACTTGGGCAGGGAGGACTTGTGACGGGTGTGTaGGAAGCCGCCCGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LGGWGARPAHEGRLGQGGLVTGV*EAARLC
Trigger: GCACAGGCGGGCGGCTTCCCACACACCCGTCACAAG...TCCTCCCTGCCCAAGTCTTCCTTCGTGAGCTGGCCTTGCTCCCCATCCCCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGCTCCCTCGCCTGCATCAGCACCAGGTCCCATGCGTGGTTGATCTTCTTGTGTGCCGCGGCCTCGAGGTaGGAAAGCAGGTGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: CSLACISTRSHAWLIFLCAAASR*ESRCRR
Trigger: GCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGC...ACACAAGAAGATCAACCACGCATGGGACCTGGTGCTGATGCAGGCGAGGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CAA 72 bp ATGGGTGGGGATGGCACCGCCCTACCGCCGAGAGAGTaGAAGCTGCACCCCCGAAAGGAGCCAGCTGTACCT +
Preference number: 4 (lower is better)
Translates to: MGGDGTALPPRE*KLHPRKEPAVP
Trigger: AGGTACAGCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCATCCCCACCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GAAGACTGGGCCCCCTGGGCACAAGGGGACACTGGTGCTGGGTTCAGCAGCCCCGTAGGCGTCATTGTCTaGGATCCAGGGATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: EDWAPWAQGDTGAGFSSPVGVIV*DPGIAG
Trigger: CCCAGCAATCCCTGGATCTCAGACAATGACGCCTAC...GGGGCTGCTGAACCCAGCACCAGTGTCCCCTTGTGCCCAGGGGGCCCAGTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp AGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGGGAGCTCCCGGAAGCTaGAGCCCCATCTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: SRCRRTCGQILERVWRGRGAPGS*SPISPH
Trigger: GTGTGGAGAGATGGGGCTTCAGCTTCCGGGAGCTCC...CCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCAGCTGTACCTTCACCCTTCCCAGAAAGTCCATaGAGTGGGCCCGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: PPRELKLHPRKEPAVPSPFPESP*SGPAPR
Trigger: CCGTGGGGCGGGCCCACTTCATGGACTTTCTGGGAA...GGGTGAAGGTACAGCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACATGTCCGCGTCTTGTaGCGGGTGTGTGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: DLEAASARHSLGSSSRLTHVRVL*RVCGKP
Trigger: CGGCTTCCCACACACCCGTCACAAGACGCGGACATG...TGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp AAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGAGCTCCGGAAGGCAGTaGCCTCGAGGCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KQVPAHLWTNSGTRLARESSGRQ*PRGSLS
Trigger: GCTGAGGCTGCCTCGAGGTCACTGCCTTCCGGAGCT...CTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CCCCCGAAAGGAGCCAGCTGTACCTTCACCCAGTCTGGGGGACTGGTGAGGCACTACCGCCGAGAGAGTTaGAGCTGCACCCCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: PPKGASCTFTQSGGLVRHYRRES*SCTPER
Trigger: CCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTA...GTGCCTCACCAGTCCCCCAGACTGGGTGAAGGTACAGCTGGCTCCTTTCGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCAGTGACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCAGCTGCTCCCTCGCCTaGATCAGCACCAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: AVTSRQPQHGTLLGPLPGSCSLA*ISTRSH
Trigger: ATGGGACCTGGTGCTGATGCAGGCGAGGGAGCAGCT...GCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGTCCCCCTTGCTGCGCTaGTTGGCTGCCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VGKQVPAHLWTNSGTRLASPLLR*LAALSC
Trigger: GCAGCTGAGGGCAGCCAAGCAGCGCAGCAAGGGGGA...CGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGAGCCTGTCCCCCTTGCTaGGCTGCTTGGCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SLGSSSRLTLGDSGEALGACPPC*AAWLPS
Trigger: TGAGGGCAGCCAAGCAGCGCAGCAAGGGGGACAGGC...TCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCCTGAGATCCAGGGATTaGTGGGCAGGCACCCCGACA +
Preference number: 4 (lower is better)
Translates to: ASARHSLGSSSRLTLGDSLRSRD*WAGTPT
Trigger: TGTCGGGGTGCCTGCCCAGCAATCCCTGGATCTCAG...GCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAGTGGGGACCTGGGCCTaGGCTCCATATCGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGAGAPVDKFWNAFGEGGVGTWA*APYRSS
Trigger: GGAGCTTCGATATGGAGCGCAGGCCCAGGTCCCCAC...TCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACAGAGGGAGGGAGGCTGTaGACCCCACAGAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: DLEAASARHSLGSSSRLTEGGRL*TPQKTG
Trigger: CCCAGTCTTCTGTGGGGTGCACAGCCTCCCTCCCTC...TGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp ACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCCCGCCTGTGCATCTTaGTTCCGGGTATTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TCMSASCDGCVGSRPPVHPACAS*FRVFAG
Trigger: GCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGG...ATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCAGGTGGGAAAGCAGGTaGCGGCGCACCTGTGGACAA +
Preference number: 4 (lower is better)
Translates to: ASARHSLGSSSRLTLGDSRWESR*RRTCGQ
Trigger: TTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCT...GCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAAGGTGGGAAAGCAGGTaGCGGCGCACCTGTGGACAA +
Preference number: 4 (lower is better)
Translates to: AELAPRPACPRLVTGVWERWESR*RRTCGQ
Trigger: TTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCT...TTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTTCCATCTTCCTCAGATaGGGCATCTGCGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SGTPGKDPPYGIGPRQWGSIFLR*GICARG
Trigger: CCCCCGGGCGCAGATGCCGCATCTGAGGAAGATGGA...ACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397770.8
CDS-3UTR CCA 90 bp GCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGGAGACGCAGAACTTCTaGGCCAACCACTGCACGACG +
Preference number: 4 (lower is better)
Translates to: ASCDGCVGSRPPVHLASGETQNF*ANHCTT
Trigger: CGTCGTGCAGTGGTTGGCCCAGAAGTTCTGCGTCTC...CCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCTCGTGGGGTCCACGCTaGCCGCAGAAACTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: EAASARHSLGSSSRLTLGSWGPR*PQKLRY
Trigger: GTACCTGAGTTTCTGCGGCCAGCGTGGACCCCACGA...GCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAGGGGCTCGAGTGCCGTaGCCTCCACGTAAACGGGAA +
Preference number: 4 (lower is better)
Translates to: AGAGAPVDKFWNAFGEGGGARVP*PPRKRE
Trigger: TTCCCGTTTACGTGGAGGCCACGGCACTCGAGCCCC...TCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAGGCGCAGCTCCGGAAGGCAGGAAGGAGTGCAGGGCTaGGGCTCGAGTGCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: QILERVWRGRNRRSSGRQEGVQG*GSSAVA
Trigger: GGCCACGGCACTCGAGCCCCAGCCCTGCACTCCTTC...CTGCCTTCCGGAGCTGCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAATTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACAGGGGACACTGGTGCTaGGTTCAGCAGCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLGPLPGSHWATAERLLDRGHWC*VQQPPG
Trigger: TCCTGGGGGCTGCTGAACCCAGCACCAGTGTCCCCT...GTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACAGAAGACTGGGCCCCCTaGGCACAAGGGGACACTGGT +
Preference number: 4 (lower is better)
Translates to: DLEAASARHSLGSSSRLTEDWAP*AQGDTG
Trigger: ACCAGTGTCCCCTTGTGCCCAGGGGGCCCAGTCTTC...TGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGGAGGGAGGGAGGCTGTGCACCCCACAGAAGACTGGGCCCCCTGGGCACAAGGAGCTCCCTGTGGCCTTaGTCTCACCTCTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: WREGGCAPHRRLGPLGTRSSLWP*SHLSSG
Trigger: ACCTGAAGAGAGGTGAGACCAAGGCCACAGGGAGCT...CCTTGTGCCCAGGGGGCCCAGTCTTCTGTGGGGTGCACAGCCTCCCTCCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGGCACAAGGGGACACTGGTGCTGGGTTCAGCAGCCCCCAGGACCTGGGCCAAGATGGGCACCCAGTGCTaGACTGAAGACCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GHKGTLVLGSAAPRTWAKMGTQC*TEDQRR
Trigger: CCTTCTCTGGTCTTCAGTCCAGCACTGGGTGCCCAT...CTTGGCCCAGGTCCTGGGGGCTGCTGAACCCAGCACCAGTGTCCCCTTGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGGCACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCAGCAGCACGGCACTCTCTTaGGTCCTCTTCCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: WHRPTAERVEAAPPKGASSTALS*VLFQAH
Trigger: GTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCT...GCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGATTCTGGAACGCGTTTaGCGAGGGAGGAATAGGCGC +
Preference number: 4 (lower is better)
Translates to: PRPACPRLVTGVWEAARLILERV*RGRNRR
Trigger: GCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAAT...CAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGGCACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCAGCAGGATCAGGGACGCCTaGCAAGGATCCACCCTATGG +
Preference number: 4 (lower is better)
Translates to: WHRPTAERVEAAPPKGASRIRDA*QGSTLW
Trigger: CCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCT...GCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGAGGATCAGGGACGCCTaGCAAGGATCCACCCTATGG +
Preference number: 4 (lower is better)
Translates to: ASCDGCVGSRPPVHLASGRIRDA*QGSTLW
Trigger: CCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCT...CCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGGAGGCACTTGGGGGATaGGGAGCAAGGCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: CDGCVGSRPPVHLASGYSEALGG*GARPAH
Trigger: GTGAGCTGGCCTTGCTCCCCATCCCCCAAGTGCCTC...CGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp AAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGAGCCAGCCCTATGGGTaGGGATGGCACCGCCCTACC +
Preference number: 4 (lower is better)
Translates to: KQVPAHLWTNSGTRLARESQPYG*GWHRPT
Trigger: GGTAGGGCGGTGCCATCCCCACCCATAGGGCTGGCT...CTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp AAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGTGTGAGCCAGCCCTATaGGTGGGGATGGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: KQVPAHLWTNSGTRLARECEPAL*VGMAPP
Trigger: GGGCGGTGCCATCCCCACCCATAGGGCTGGCTCACA...CTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TTGGGGGATGGGGAGCAAGGCCAGCTCACGAAGGAAGACTTGGGCAGGGAGGATTGTGAGCCAGCCCTATaGGTGGGGATGGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: LGDGEQGQLTKEDLGREDCEPAL*VGMAPP
Trigger: GGGCGGTGCCATCCCCACCCATAGGGCTGGCTCACA...ATCCTCCCTGCCCAAGTCTTCCTTCGTGAGCTGGCCTTGCTCCCCATCCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGAGGATCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGGTAGGGCGTCTCGTCTaGCCGGAGCATGAGGCTACG +
Preference number: 4 (lower is better)
Translates to: GGSGTPGKDPPYGIGPRQVGRLV*PEHEAT
Trigger: CGTAGCCTCATGCTCCGGCCAGACGAGACGCCCTAC...CTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGGGTCCCATGCGTGGTTaGTCTTCTTGTGTAGCCGGT +
Preference number: 4 (lower is better)
Translates to: ASCDGCVGSRPPVHLASGGPMRG*SSCVAG
Trigger: ACCGGCTACACAAGAAGATCAACCACGCATGGGACC...CCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GCAGTGACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCCCGTGGGGGCATTCATaGCCCAGTAGGCGTCATTGT +
Preference number: 4 (lower is better)
Translates to: AVTSRQPQHGTLLGPLPGPWGHS*PSRRHC
Trigger: ACAATGACGCCTACTGGGTCATGAATGCCCCCACGG...GCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCCCGTGGGGGCATTCATaGCCCAGTAGGCGTCATTGT +
Preference number: 4 (lower is better)
Translates to: EAASARHSLGSSSRLTLGPWGHS*PSRRHC
Trigger: ACAATGACGCCTACTGGGTCATGAATGCCCCCACGG...GCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATATCCGGCTGTCGATGTTaGCCCAGTGGGCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: GAGAPVDKFWNAFGEGGISGCRC*PSGQLR
Trigger: CCGGAGCTGCCCACTGGGTCAACATCGACAGCCGGA...TATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTGTGACGATTCACGCAGGACGTTaGGCTGCAGGGACTAGAGTG +
Preference number: 4 (lower is better)
Translates to: LLDGAELAPRPACPRLVTIHAGR*AAGTRV
Trigger: CACTCTAGTCCCTGCAGCTCAACGTCCTGCGTGAAT...CGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCGCCTCGTCAGTGGGGTaGCAATGTCAGAGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: GSSSRLTLGDSGEALGRGASSVG*QCQSCL
Trigger: TAGACAACTCTGACATTGTCACCCCACTGACGAGGC...GCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACTACCGCCGAGAGAGTTaGAGCTGCACCCCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: LLGPLPGSHWATAERLLDYRRES*SCTPER
Trigger: CCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTA...GTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGATACCGCCGAGAGAGTTaGAGCTGCACCCCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: AGAGAPVDKFWNAFGEGGYRRES*SCTPER
Trigger: CCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTA...TCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp TGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATGGACGCTGTTGGGAGTaGCTGGATGTGAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CVGSRPPVHLASGYSLADGRCWE*LDVSQP
Trigger: GGGCTGGCTCACATCCAGTCACTCCCAACAGCGTCC...ATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGTTCTGGGCCAACCACTaGACGACGTCGCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: CDGCVGSRPPVHLASGYSFWANH*TTSLPV
Trigger: GACAGGCAGCGACGTCGTGCAGTGGTTGGCCCAGAA...CGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp ATCCACCAGGGTGGGGACCTGGGCCTGCGCTCCATATCGAAGCTCCTCACATGCGGCATAGTCCAGCTCTaGAGCCGGCCTCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: IHQGGDLGLRSISKLLTCGIVQL*SRPQGT
Trigger: AGTACCCTGAGGCCGGCTGCAGAGCTGGACTATGCC...GCATGTGAGGAGCTTCGATATGGAGCGCAGGCCCAGGTCCCCACCCTGGTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR GCA 90 bp TGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCCGCTTATGGAAATCTaGACTCTTGGTCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: WVLFQAHTGRQRRGSWTGPLMEI*TLGRGP
Trigger: AGGCCCCCGACCAAGAGTGCAGATTTCCATAAGCGG...CCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR GCA 90 bp ACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCAGCTGTACTGAGATCCAGGGATTaGTGGGCAGGCACCCCGACA +
Preference number: 4 (lower is better)
Translates to: TALPPRELKLHPRKEPAVLRSRD*WAGTPT
Trigger: TGTCGGGGTGCCTGCCCAGCAATCCCTGGATCTCAG...TACAGCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGGGATGGGCACCCAGTaGTGGACTGAAGACCAGAGA +
Preference number: 4 (lower is better)
Translates to: AELAPRPACPRLVTGVWEGMGTQ*WTEDQR
Trigger: TCTCTGGTCTTCAGTCCAGCACTGGGTGCCCATCCC...TTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGCGCATCTTCACGCCCTaGTCGGGGTCCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: ESRCRRTCGQILERVWRGRIFTP*SGSCML
Trigger: GAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCG...CCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACAGATCCAGGGATTGCTaGGCAGGCACCCCGACACGA +
Preference number: 4 (lower is better)
Translates to: LLGPLPGSHWATAERLLDRSRDC*AGTPTR
Trigger: TCGTGTCGGGGTGCCTGCCCAGCAATCCCTGGATCT...GTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGAGATCCAGGGATTGCTaGGCAGGCACCCCGACACGA +
Preference number: 4 (lower is better)
Translates to: CDGCVGSRPPVHLASGYSRSRDC*AGTPTR
Trigger: TCGTGTCGGGGTGCCTGCCCAGCAATCCCTGGATCT...CGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp AGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCTGCAGGGACTAGAGTaGCAGATGGGCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLSTALSWVLFQAHTGRQLQGLE*QMGQVH
Trigger: GTGGACCTGGCCCATCTGCCACTCTAGTCCCTGCAG...CTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp ACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTGACAATCACCCCACAGAAGACTaGGCCCCCTGGGCACAAGGG +
Preference number: 4 (lower is better)
Translates to: TPGKDPPYGIGPRQWGDNHPTED*APWAQG
Trigger: CCCTTGTGCCCAGGGGGCCCAGTCTTCTGTGGGGTG...ATTGTCACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGTGGACCCATTCCTTCTaGGCAGGGAGGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CDGCVGSRPPVHLASGYSWTHSF*AGRACW
Trigger: CCAGCAAGCCCTCCCTGCCCAGAAGGAATGGGTCCA...CGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp ACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCAATGAACCCCCTCCCTaGGAATCCACACCTGGACCC +
Preference number: 4 (lower is better)
Translates to: TALSWVLFQAHTGRQRRGNEPPP*ESTPGP
Trigger: GGGTCCAGGTGTGGATTCCCAGGGAGGGGGTTCATT...GCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGAGCTCCCTGTGGCCTTaGTCTCACCTCTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: WVLFQAHTGRQRRGSWTGSSLWP*SHLSSG
Trigger: ACCTGAAGAGAGGTGAGACCAAGGCCACAGGGAGCT...CCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTGACAATGTCAGACAGCGGAGAGGCTCTTaGACGGGGCAGAGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: GKDPPYGIGPRQWGDNVRQRRGS*TGQSSR
Trigger: GCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTG...TCTGACATTGTCACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TTGGGGGATGGGGAGCAAGGCCAGCTCACGAAGGAAGACTTGGGCAGGGAGGATCTTCCAGGCTCACACTaGGCGACAGCGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LGDGEQGQLTKEDLGREDLPGSH*ATAERL
Trigger: GAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAG...ATCCTCCCTGCCCAAGTCTTCCTTCGTGAGCTGGCCTTGCTCCCCATCCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CACAGAAGACTGGGCCCCCTGGGCACAAGGGGACACTGGTGCTGGGTTCAGCAGAGCACGGCACTCTCTTaGGTCCTCTTCCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: HRRLGPLGTRGHWCWVQQSTALS*VLFQAH
Trigger: GTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCT...CTGCTGAACCCAGCACCAGTGTCCCCTTGTGCCCAGGGGGCCCAGTCTTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp AAGGGGACACTGGTGCTGGGTTCAGCAGCCCCCAGGACCTGGGCCAAGACGGGGCCTGTGGACAAATTCTaGAACGCGTTTGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: KGTLVLGSAAPRTWAKTGPVDKF*NAFGEG
Trigger: TCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGG...CCCCGTCTTGGCCCAGGTCCTGGGGGCTGCTGAACCCAGCACCAGTGTCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCCCTGTGGACAAATTCTaGAACGCGTTTGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: GSSSRLTLGDSGEALGRGPVDKF*NAFGEG
Trigger: TCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGG...GCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGATGGCACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCCAAGGATCCACCCTATaGAATCGGGCCTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GWHRPTAERVEAAPPKGAQGSTL*NRASSV
Trigger: CACTGACGAGGCCCGATTCCATAGGGTGGATCCTTG...GGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGTGCCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GAGGATCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGAGGCACTTGGGGGATaGGGAGCAAGGCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: EDQGRLARIHPMESGLVSEALGG*GARPAH
Trigger: GTGAGCTGGCCTTGCTCCCCATCCCCCAAGTGCCTC...ACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACATGCCCAGCGCTTTCCTaGAGTACTCGATCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QPQHGTLLGPLPGSHWATCPALS*STRSPA
Trigger: AGCGGGAGATCGAGTACTTCAGGAAAGCGCTGGGCA...TGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp AGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGCACCCAGTGCTGGACTaGAGACCAGAGAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SRCRRTCGQILERVWRGRHPVLD*RPEKVE
Trigger: CTCCACCTTCTCTGGTCTTCAGTCCAGCACTGGGTG...CCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGACACCCAGTGCTGGACTaGAGACCAGAGAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AGAGAPVDKFWNAFGEGGHPVLD*RPEKVE
Trigger: CTCCACCTTCTCTGGTCTTCAGTCCAGCACTGGGTG...TCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAGGCGCACATGTCCGCGTCTTGTaGCGGGTGTGTGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GAPVDKFWNAFGEGGIGAHVRVL*RVCGKP
Trigger: CGGCTTCCCACACACCCGTCACAAGACGCGGACATG...TGCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGTTCTGGGCCAACCACTaGACGACGTCGCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ESRCRRTCGQILERVWRGFWANH*TTSLPV
Trigger: GACAGGCAGCGACGTCGTGCAGTGGTTGGCCCAGAA...CCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCAGCACCAGGTCCCATaGGTGGTTGATCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: WVLFQAHTGRQRRGSWTGQHQVP*VVDLLV
Trigger: CACAAGAAGATCAACCACGCATGGGACCTGGTGCTG...CCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTCGAAGCTCCTCACATaGCTCCCAGAAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: ASCDGCVGSRPPVHLASGSKLLT*LPEAEV
Trigger: AACCTCAGCTTCTGGGAGGCATGTGAGGAGCTTCGA...CCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp AAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGCGGGATCCCAGCCTCTaGCAGGAGGGCCTTGTACAT +
Preference number: 4 (lower is better)
Translates to: KQVPAHLWTNSGTRLARERDPSL*QEGLVH
Trigger: ATGTACAAGGCCCTCCTGGCAGAGGCTGGGATCCCG...CTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATCAAGACGGGGGTGGCTaGTGCATTCACGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: CVGSRPPVHLASGYSLADQDGGG*CIHAGR
Trigger: ACGTCCTGCGTGAATGCAGCAGCCACCCCCGTCTTG...ATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAGGGATGGGCACCCAGTaGTGGACTGAAGACCAGAGA +
Preference number: 4 (lower is better)
Translates to: AGAGAPVDKFWNAFGEGGGMGTQ*WTEDQR
Trigger: TCTCTGGTCTTCAGTCCAGCACTGGGTGCCCATCCC...TCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GTACGCCTCAAGGCAGACGGAGGACTTCACTCGGGTCCTGCCCAGCGCTTTCCTGAAGCCGCCCGCCTGTaGATCTTGCTTCCGGGTATT +
Preference number: 4 (lower is better)
Translates to: VRLKADGGLHSGPAQRFPEAARL*ILLPGI
Trigger: AATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTC...AGGAAAGCGCTGGGCAGGACCCGAGTGAAGTCCTCCGTCTGCCTTGAGGCGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR GCA 90 bp GAGGATCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTAGGTGGGAAAGCAGGTaGCGGCGCACCTGTGGACAA +
Preference number: 4 (lower is better)
Translates to: EDQGRLARIHPMESGLVSRWESR*RRTCGQ
Trigger: TTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCT...ACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAGGCGCACGCATCTTCACGCCCTaGTCGGGGTCCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: GAPVDKFWNAFGEGGIGARIFTP*SGSCML
Trigger: GAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCG...TGCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGACCAGGTCCCATGCGTaGTTGATCTTCTTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: PRPACPRLVTGVWEAARLTRSHA*LIFLCS
Trigger: GCTACACAAGAAGATCAACCACGCATGGGACCTGGT...CAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp ACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTGACAATAGAAAGTCCATGAAGTaGGCCCGCCCCACGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TPGKDPPYGIGPRQWGDNRKSMK*ARPTGS
Trigger: GGACCCCGTGGGGCGGGCCCACTTCATGGACTTTCT...ATTGTCACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAGGGGCTCGAGTGCCGTaGCCTCCACGTAAACGGGAA +
Preference number: 4 (lower is better)
Translates to: GAGAPVDKFWNAFGEGGIGARVP*PPRKRE
Trigger: TTCCCGTTTACGTGGAGGCCACGGCACTCGAGCCCC...TATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAGGCGCAGCTCCGGAAGGCAGGGCACAAGGGGACACTaGTGCTGGGTTCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QILERVWRGRNRRSSGRQGTRGH*CWVQQP
Trigger: GGGCTGCTGAACCCAGCACCAGTGTCCCCTTGTGCC...CTGCCTTCCGGAGCTGCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAGAAGACTGGGCCCCCTaGGCACAAGGGGACACTGGT +
Preference number: 4 (lower is better)
Translates to: GAGAPVDKFWNAFGEGGIEDWAP*AQGDTG
Trigger: ACCAGTGTCCCCTTGTGCCCAGGGGGCCCAGTCTTC...TATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp ACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCAGCTCCCTGTGGCCTTaGTCTCACCTCTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TALSWVLFQAHTGRQRRGSSLWP*SHLSSG
Trigger: ACCTGAAGAGAGGTGAGACCAAGGCCACAGGGAGCT...GCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp AGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGGTGCCGGCGCACCTGTaGACAAATTCTGGAACGCGT +
Preference number: 4 (lower is better)
Translates to: SLSTALSWVLFQAHTGRQVPAHL*TNSGTR
Trigger: ACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCAC...CTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CTTGGGGGATGGGGAGCAAGGCCAGCTCACGAAGGAAGACTTGGGCAGGGAGGAATTCACGCAGGACGTTaGGCTGCAGGGACTAGAGTG +
Preference number: 4 (lower is better)
Translates to: LGGWGARPAHEGRLGQGGIHAGR*AAGTRV
Trigger: CACTCTAGTCCCTGCAGCTCAACGTCCTGCGTGAAT...TCCTCCCTGCCCAAGTCTTCCTTCGTGAGCTGGCCTTGCTCCCCATCCCCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGCCTCGTCAGTGGGGTaGCAATGTCAGAGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: ASARHSLGSSSRLTLGDSASSVG*QCQSCL
Trigger: TAGACAACTCTGACATTGTCACCCCACTGACGAGGC...GCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTACCCTGGTCGGGGTCCTaGATGCTCACGACCACCCGC +
Preference number: 4 (lower is better)
Translates to: RPPVHLASGYSLADLLVLPWSGS*MLTTTR
Trigger: GCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGG...TAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAGGCATAGTCCAGCTCTaGAGCCGGCCTCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: GAGAPVDKFWNAFGEGGIGIVQL*SRPQGT
Trigger: AGTACCCTGAGGCCGGCTGCAGAGCTGGACTATGCC...TATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAGGCGCAGGCATAGTCCAGCTCTaGAGCCGGCCTCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: GAPVDKFWNAFGEGGIGAGIVQL*SRPQGT
Trigger: AGTACCCTGAGGCCGGCTGCAGAGCTGGACTATGCC...TGCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp AGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATACAAGGGGACACTGGTaGTGGGTTCAGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RCRRTCGQILERVWRGRNTRGHW*WVQQPP
Trigger: TGGGGGCTGCTGAACCCAGCACCAGTGTCCCCTTGT...ATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp ACGGAGGACTTCACTCGGGTCCTGCCCAGCGCTTTCCTGAAGTACTCGATCTCCCCCGCCTGTGCATCTTaGTTCCGGGTATTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TEDFTRVLPSAFLKYSISPACAS*FRVFAG
Trigger: GCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGG...GGAGATCGAGTACTTCAGGAAAGCGCTGGGCAGGACCCGAGTGAAGTCCTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR GCA 90 bp GGGCACAAGGGGACACTGGTGCTGGGTTCAGCAGCCCCCAGGACCTGGGCCAAGGGTCTTTTATTTGTGTaGTGGACGCTGTTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GHKGTLVLGSAAPRTWAKGLLFV*WTLLGV
Trigger: CACTCCCAACAGCGTCCAGCACACAAATAAAAGACC...CTTGGCCCAGGTCCTGGGGGCTGCTGAACCCAGCACCAGTGTCCCCTTGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp TGGAGGGAGGGAGGCTGTGCACCCCACAGAAGACTGGGCCCCCTGGGCACAAGGCCGCTTATGGAAATCTaGACTCTTGGTCATGAGCAC +
Preference number: 4 (lower is better)
Translates to: WREGGCAPHRRLGPLGTRPLMEI*TLGHEH
Trigger: GTGCTCATGACCAAGAGTGCAGATTTCCATAAGCGG...CCTTGTGCCCAGGGGGCCCAGTCTTCTGTGGGGTGCACAGCCTCCCTCCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCAGGGCCCAAGGGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGAGTGACCAGCAGGCGCTaGCTCCGCATCTTCACGCCC +
Preference number: 4 (lower is better)
Translates to: PGPKGLLFVCWTLLGVTGVTSRR*LRIFTP
Trigger: GGGCGTGAAGATGCGGAGCCAGCGCCTGCTGGTCAC...TCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCTTGGGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCAGGGCCCAAGGGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGATCGATGTTGACCCAGTaGGCAGCTCCGGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGPKGLLFVCWTLLGVTGSMLTQ*AAPGAR
Trigger: CCTGGCCCCCGGAGCTGCCCACTGGGTCAACATCGA...TCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCTTGGGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCAGGGCCCAAGGGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGACACCCCACAGAAGACTaGGCCCCCTGGGCACAAGGG +
Preference number: 4 (lower is better)
Translates to: PGPKGLLFVCWTLLGVTGHPTED*APWAQG
Trigger: CCCTTGTGCCCAGGGGGCCCAGTCTTCTGTGGGGTG...TCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCTTGGGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGAAATGAACCCCCTCCCTaGGAATCCACACCTGGACCC +
Preference number: 4 (lower is better)
Translates to: SLGSSSRLTLGDSGEALGNEPPP*ESTPGP
Trigger: GGGTCCAGGTGTGGATTCCCAGGGAGGGGGTTCATT...TCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTGATCGGGCCTCGTCAGTaGGGTGACAATGTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: QGRLARIHPMESGLVSGVIGPRQ*GDNVRV
Trigger: AACTCTGACATTGTCACCCCACTGACGAGGCCCGAT...CACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GCATCCACCAGGGTGGGGACCTGGGCCTGCGCTCCATATCGAAGCTCCTCACATCAAGGATCCACCCTATaGAATCGGGCCTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: ASTRVGTWACAPYRSSSHQGSTL*NRASSV
Trigger: CACTGACGAGGCCCGATTCCATAGGGTGGATCCTTG...ATGTGAGGAGCTTCGATATGGAGCGCAGGCCCAGGTCCCCACCCTGGTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR CCA 90 bp AGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCAAGGATCCACCCTATaGAATCGGGCCTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SLSTALSWVLFQAHTGRQQGSTL*NRASSV
Trigger: CACTGACGAGGCCCGATTCCATAGGGTGGATCCTTG...CTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACATCACGAAGGAAGACTTaGGCAGGGAGGATCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QPQHGTLLGPLPGSHWATSRRKT*AGRIRD
Trigger: GTCCCTGATCCTCCCTGCCCAAGTCTTCCTTCGTGA...TGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GCATCCACCAGGGTGGGGACCTGGGCCTGCGCTCCATATCGAAGCTCCTCACATTACCTTCACCCAGTCTaGGGGACTGGTGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: ASTRVGTWACAPYRSSSHYLHPV*GTGEAL
Trigger: AAGTGCCTCACCAGTCCCCCAGACTGGGTGAAGGTA...ATGTGAGGAGCTTCGATATGGAGCGCAGGCCCAGGTCCCCACCCTGGTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR CCA 90 bp AGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGTACCTTCACCCAGTCTaGGGGACTGGTGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: SRCRRTCGQILERVWRGRYLHPV*GTGEAL
Trigger: AAGTGCCTCACCAGTCCCCCAGACTGGGTGAAGGTA...CCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp AAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGTAGGCGTCATTGTCTaGGATCCAGGGATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KQVPAHLWTNSGTRLAREVGVIV*DPGIAG
Trigger: CCCAGCAATCCCTGGATCTCAGACAATGACGCCTAC...CTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CTTGGGGGATGGGGAGCAAGGCCAGCTCACGAAGGAAGACTTGGGCAGGGAGGAGCCTCGTCAGTGGGGTaGCAATGTCAGAGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: LGGWGARPAHEGRLGQGGASSVG*QCQSCL
Trigger: TAGACAACTCTGACATTGTCACCCCACTGACGAGGC...TCCTCCCTGCCCAAGTCTTCCTTCGTGAGCTGGCCTTGCTCCCCATCCCCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CCAGGGCCCAAGGGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGAGGACGCTGTTGGGAGTaGCTGGATGTGAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PGPKGLLFVCWTLLGVTGGRCWE*LDVSQP
Trigger: GGGCTGGCTCACATCCAGTCACTCCCAACAGCGTCC...TCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCTTGGGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp AGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCAGCACCAGGTCCCATaGGTGGTTGATCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SLSTALSWVLFQAHTGRQQHQVP*VVDLLV
Trigger: CACAAGAAGATCAACCACGCATGGGACCTGGTGCTG...CTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACATCGAAGCTCCTCACATaGCTCCCAGAAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: DLEAASARHSLGSSSRLTSKLLT*LPEAEV
Trigger: AACCTCAGCTTCTGGGAGGCATGTGAGGAGCTTCGA...TGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CCCCCGAAAGGAGCCAGCTGTACCTTCACCCAGTCTGGGGGACTGGTGAGGCACATGAGCATGTATATGTaGAGCTGGGCGTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PPKGASCTFTQSGGLVRHMSMYM*SWASSR
Trigger: CCTGGATGACGCCCAGCTGCACATATACATGCTCAT...GTGCCTCACCAGTCCCCCAGACTGGGTGAAGGTACAGCTGGCTCCTTTCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTGTGACGGGTCTTTTATTTGTGTaGTGGACGCTGTTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LLDGAELAPRPACPRLVTGLLFV*WTLLGV
Trigger: CACTCCCAACAGCGTCCAGCACACAAATAAAAGACC...CGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAGAGACGCAGAACTTCTaGGCCAACCACTGCACGACG +
Preference number: 4 (lower is better)
Translates to: GAGAPVDKFWNAFGEGGIETQNF*ANHCTT
Trigger: CGTCGTGCAGTGGTTGGCCCAGAAGTTCTGCGTCTC...TATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCAGGACCTGGGCCAAGACGGGGGTGGCTGCTGCATTCACGCAGGACGTTGAGCTCGATCTCCCGCTTATaGAAATCTGCACTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PGPGPRRGWLLHSRRTLSSISRL*KSALLV
Trigger: GACCAAGAGTGCAGATTTCCATAAGCGGGAGATCGA...GCTCAACGTCCTGCGTGAATGCAGCAGCCACCCCCGTCTTGGCCCAGGTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAGGGCCAAGACGGGGGTaGCTGCTGCATTCACGCAGG +
Preference number: 4 (lower is better)
Translates to: RPPVHLASGYSLADLLVLGPRRG*LLHSRR
Trigger: CCTGCGTGAATGCAGCAGCCACCCCCGTCTTGGCCC...TAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp AAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGATTCTGGAACGCGTTTaGCGAGGGAGGAATAGGCGC +
Preference number: 4 (lower is better)
Translates to: KQVPAHLWTNSGTRLAREILERV*RGRNRR
Trigger: GCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAAT...CTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CTTGGGGGATGGGGAGCAAGGCCAGCTCACGAAGGAAGACTTGGGCAGGGAGGAATCGGGCCTCGTCAGTaGGGTGACAATGTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LGGWGARPAHEGRLGQGGIGPRQ*GDNVRV
Trigger: AACTCTGACATTGTCACCCCACTGACGAGGCCCGAT...TCCTCCCTGCCCAAGTCTTCCTTCGTGAGCTGGCCTTGCTCCCCATCCCCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAAGGATCAGGGACGCCTaGCAAGGATCCACCCTATGG +
Preference number: 4 (lower is better)
Translates to: GAGAPVDKFWNAFGEGGIRIRDA*QGSTLW
Trigger: CCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCT...TATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGTCACGAAGGAAGACTTaGGCAGGGAGGATCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VGKQVPAHLWTNSGTRLASRRKT*AGRIRD
Trigger: GTCCCTGATCCTCCCTGCCCAAGTCTTCCTTCGTGA...CGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGTACCTTCACCCAGTCTaGGGGACTGGTGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: VGKQVPAHLWTNSGTRLAYLHPV*GTGEAL
Trigger: AAGTGCCTCACCAGTCCCCCAGACTGGGTGAAGGTA...CGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp AAGGGGACACTGGTGCTGGGTTCAGCAGCCCCCAGGACCTGGGCCAAGACGGGGCTTTTATTTGTGTGCTaGACGCTGTTGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: KGTLVLGSAAPRTWAKTGLLFVC*TLLGVT
Trigger: AGTCACTCCCAACAGCGTCCAGCACACAAATAAAAG...CCCCGTCTTGGCCCAGGTCCTGGGGGCTGCTGAACCCAGCACCAGTGTCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAGCAGGATCCCCGCCCTaGACCCTGCTCCAGCACATC +
Preference number: 4 (lower is better)
Translates to: RPPVHLASGYSLADLLVLAGSPP*TLLQHI
Trigger: GATGTGCTGGAGCAGGGTCCAGGGCGGGGATCCTGC...TAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp AGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATGGTCCCATGCGTGGTTaGTCTTCTTGTGTAGCCGGT +
Preference number: 4 (lower is better)
Translates to: RCRRTCGQILERVWRGRNGPMRG*SSCVAG
Trigger: ACCGGCTACACAAGAAGATCAACCACGCATGGGACC...ATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAGGCGCAGTAGGCGTCATTGTCTaGGATCCAGGGATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GAPVDKFWNAFGEGGIGAVGVIV*DPGIAG
Trigger: CCCAGCAATCCCTGGATCTCAGACAATGACGCCTAC...TGCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp TGCTCCCTCGCCTGCATCAGCACCAGGTCCCATGCGTGGTTGATCTTCTTGTGTCCGTGGGGGCATTCATaGCCCAGTAGGCGTCATTGT +
Preference number: 4 (lower is better)
Translates to: CSLACISTRSHAWLIFLCPWGHS*PSRRHC
Trigger: ACAATGACGCCTACTGGGTCATGAATGCCCCCACGG...ACACAAGAAGATCAACCACGCATGGGACCTGGTGCTGATGCAGGCGAGGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR TCA 90 bp TGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGAGGAGTCCTTCTTCATaGGCATGTATATGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: WVLFQAHTGRQRRGSWTGRSPSS*ACICAA
Trigger: AGCTGCACATATACATGCTCATGAAGAAGGACTCCT...CCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CCAGGGCCCAAGGGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGACCCGCCTGTGCATCTTaGTTCCGGGTATTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PGPKGLLFVCWTLLGVTGPACAS*FRVFAG
Trigger: GCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGG...TCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCTTGGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp GCAGTGACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCCCGCTTATGGAAATCTaGACTCTTGGTCATGAGCAC +
Preference number: 4 (lower is better)
Translates to: AVTSRQPQHGTLLGPLPGPLMEI*TLGHEH
Trigger: GTGCTCATGACCAAGAGTGCAGATTTCCATAAGCGG...GCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACAACCAGGTCCCATGCGTaGTTGATCTTCTTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: DLEAASARHSLGSSSRLTTRSHA*LIFLCS
Trigger: GCTACACAAGAAGATCAACCACGCATGGGACCTGGT...TGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp ACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATTCGATCTCCCGCTTATaGAAATCTGCACTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: TCMSASCDGCVGSRPPVHSISRL*KSALLV
Trigger: GACCAAGAGTGCAGATTTCCATAAGCGGGAGATCGA...ATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAAGAAAGTCCATGAAGTaGGCCCGCCCCACGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RPPVHLASGYSLADLLVLRKSMK*ARPTGS
Trigger: GGACCCCGTGGGGCGGGCCCACTTCATGGACTTTCT...TAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATCCTGTGGACAAATTCTaGAACGCGTTTGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: CVGSRPPVHLASGYSLADPVDKF*NAFGEG
Trigger: TCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGG...ATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp TGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATATCGGGCCTCGTCAGTaGGGTGACAATGTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: CVGSRPPVHLASGYSLADIGPRQ*GDNVRV
Trigger: AACTCTGACATTGTCACCCCACTGACGAGGCCCGAT...ATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp AGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATTCACGAAGGAAGACTTaGGCAGGGAGGATCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RCRRTCGQILERVWRGRNSRRKT*AGRIRD
Trigger: GTCCCTGATCCTCCCTGCCCAAGTCTTCCTTCGTGA...ATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAGAGATGGGGATGGGCGCAGGATCCCCGCCCTaGACCCTGCTCCAGCACATC +
Preference number: 4 (lower is better)
Translates to: LASGYSLADLLVLEMGMGAGSPP*TLLQHI
Trigger: GATGTGCTGGAGCAGGGTCCAGGGCGGGGATCCTGC...GCCCATCCCCATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
3UTR CAA 72 bp GTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTaGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTT +
Preference number: 4 (lower is better)
Translates to: VTGVWEAARLCI*LPGIRWLIYWF
Trigger: AAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTGACAATGTCAGAGGTCCCATGCGTGGTTaGTCTTCTTGTGTAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GKDPPYGIGPRQWGDNVRGPMRG*SSCVAG
Trigger: ACCGGCTACACAAGAAGATCAACCACGCATGGGACC...TCTGACATTGTCACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CCAGGGCCCAAGGGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGATGCCCAGCGCTTTCCTaGAGTACTCGATCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PGPKGLLFVCWTLLGVTGCPALS*STRSPA
Trigger: AGCGGGAGATCGAGTACTTCAGGAAAGCGCTGGGCA...TCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCTTGGGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCCGGGTATTCGCTGGCTaGTTTACTGGTTTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: ASARHSLGSSSRLTLGDSRVFAG*FTGFRD
Trigger: ATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCG...GCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTACTGCAGGGACTAGAGTaGCAGATGGGCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RPPVHLASGYSLADLLVLLQGLE*QMGQVH
Trigger: GTGGACCTGGCCCATCTGCCACTCTAGTCCCTGCAG...TAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp ATGGAAATCTGCACTCTTGGTCGGGGGCCTGTTCACCAGCCAGTAGGTCTGCTCATTCTGGAACGCGTTTaGCGAGGGAGGAATAGGCGC +
Preference number: 4 (lower is better)
Translates to: MEICTLGRGPVHQPVGLLILERV*RGRNRR
Trigger: GCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAAT...GAGCAGACCTACTGGCTGGTGAACAGGCCCCCGACCAAGAGTGCAGATTTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
3UTR CAA 72 bp GGGCCCAAGGGTCTTTTATTTGTGTGCTGGACGCTGTaGGGAGTGACTGGATGTGAGCCAGCCCTATGGGTG +
Preference number: 4 (lower is better)
Translates to: GPKGLLFVCWTL*GVTGCEPALWV
Trigger: CACCCATAGGGCTGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCTTGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAAGGAGTCCTTCTTCATaGGCATGTATATGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QPQHGTLLGPLPGSHWATRSPSS*ACICAA
Trigger: AGCTGCACATATACATGCTCATGAAGAAGGACTCCT...TGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAGAGATGGGGATGGGCAGCTGCTCCCTCGCCTaGATCAGCACCAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LASGYSLADLLVLEMGMGSCSLA*ISTRSH
Trigger: ATGGGACCTGGTGCTGATGCAGGCGAGGGAGCAGCT...GCCCATCCCCATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp ACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTGACAATACCAGGTCCCATGCGTaGTTGATCTTCTTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: TPGKDPPYGIGPRQWGDNTRSHA*LIFLCS
Trigger: GCTACACAAGAAGATCAACCACGCATGGGACCTGGT...ATTGTCACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTCTTTTATTTGTGTGCTaGACGCTGTTGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: PRGSLSTALSWVLFQAHTLLFVC*TLLGVT
Trigger: AGTCACTCCCAACAGCGTCCAGCACACAAATAAAAG...AGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp AAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGAGGAGTCCTTCTTCATaGGCATGTATATGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KQVPAHLWTNSGTRLARERSPSS*ACICAA
Trigger: AGCTGCACATATACATGCTCATGAAGAAGGACTCCT...CTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGATGTGAGCCAGCCATTCACGCAGGACGTTaGGCTGCAGGGACTAGAGTG +
Preference number: 4 (lower is better)
Translates to: GLLFVCWTLLGVTGCEPAIHAGR*AAGTRV
Trigger: CACTCTAGTCCCTGCAGCTCAACGTCCTGCGTGAAT...GGCTGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp CCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAGAGATGCATGTCCGCGTCTTGTaGCGGGTGTGTGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: PVHLASGYSLADLLVLEMHVRVL*RVCGKP
Trigger: CGGCTTCCCACACACCCGTCACAAGACGCGGACATG...CATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CCAGGGCCCAAGGGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGACAGCACCAGGTCCCATaGGTGGTTGATCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: PGPKGLLFVCWTLLGVTGQHQVP*VVDLLV
Trigger: CACAAGAAGATCAACCACGCATGGGACCTGGTGCTG...TCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACCCTTGGGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAGAGATGGGGATGGGCGAGACGCAGAACTTCTaGGCCAACCACTGCACGACG +
Preference number: 4 (lower is better)
Translates to: LASGYSLADLLVLEMGMGETQNF*ANHCTT
Trigger: CGTCGTGCAGTGGTTGGCCCAGAAGTTCTGCGTCTC...GCCCATCCCCATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAGAGATGGGGGCTCGAGTGCCGTaGCCTCCACGTAAACGGGAA +
Preference number: 4 (lower is better)
Translates to: PVHLASGYSLADLLVLEMGARVP*PPRKRE
Trigger: TTCCCGTTTACGTGGAGGCCACGGCACTCGAGCCCC...CATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAGAGATGGGGATGGGCGTGCCGGCGCACCTGTaGACAAATTCTGGAACGCGT +
Preference number: 4 (lower is better)
Translates to: LASGYSLADLLVLEMGMGVPAHL*TNSGTR
Trigger: ACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCAC...GCCCATCCCCATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp GAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGCTTTTATTTGTGTGCTaGACGCTGTTGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: ESRCRRTCGQILERVWRGLLFVC*TLLGVT
Trigger: AGTCACTCCCAACAGCGTCCAGCACACAAATAAAAG...CCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATACGGGTATTCGCTGGCTaGTTTACTGGTTTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: GAGAPVDKFWNAFGEGGIRVFAG*FTGFRD
Trigger: ATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCG...TATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAATGAGCATGTATATGTaGAGCTGGGCGTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RPPVHLASGYSLADLLVLMSMYM*SWASSR
Trigger: CCTGGATGACGCCCAGCTGCACATATACATGCTCAT...TAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAGAGATGGTGCCGGCGCACCTGTaGACAAATTCTGGAACGCGT +
Preference number: 4 (lower is better)
Translates to: PVHLASGYSLADLLVLEMVPAHL*TNSGTR
Trigger: ACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCAC...CATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAGAGATGGGGATGGGCATGAGCATGTATATGTaGAGCTGGGCGTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LASGYSLADLLVLEMGMGMSMYM*SWASSR
Trigger: CCTGGATGACGCCCAGCTGCACATATACATGCTCAT...GCCCATCCCCATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CCA 90 bp CGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTATCGATCTCCCGCTTATaGAAATCTGCACTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: RPPVHLASGYSLADLLVLSISRL*KSALLV
Trigger: GACCAAGAGTGCAGATTTCCATAAGCGGGAGATCGA...TAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR TCA 90 bp GGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGATGTGAGCCAGCCCGGGTATTCGCTGGCTaGTTTACTGGTTTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: GLLFVCWTLLGVTGCEPARVFAG*FTGFRD
Trigger: ATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCG...GGCTGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAGAGATGTCGAAGCTCCTCACATaGCTCCCAGAAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PVHLASGYSLADLLVLEMSKLLT*LPEAEV
Trigger: AACCTCAGCTTCTGGGAGGCATGTGAGGAGCTTCGA...CATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR GCA 90 bp CCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATTTACTGGTTTTAGAGATGGGTCTTTTATTTGTGTaGTGGACGCTGTTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PVHLASGYSLADLLVLEMGLLFV*WTLLGV
Trigger: CACTCCCAACAGCGTCCAGCACACAAATAAAAGACC...CATCTCTAAAACCAGTAAATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS GCA 90 bp GCAGGCGCTGGCTCCGCATCTTCACGCCCTGGTCGGGGTCCTGCATaGTCACGACCACCCGCTCCATCTGGGCGGAGGGAGTCGTCAGGG +
Preference number: 5 (lower is better)
Translates to: AGAGSASSRPGRGPA*SRPPAPSGRRESSG
Trigger: CCCTGACGACTCCCTCCGCCCAGATGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCGGAGCCAGCGCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472466.1
CDS GCA 90 bp ACCAGCAGGCGCTGGCTCCGCATCTTCACGCCCTGGTCGGGGTCCTaGATGCTCACGACCACCCGCTCCATCTGGGCGGAGGGAGTCGTC +
Preference number: 5 (lower is better)
Translates to: TSRRWLRIFTPWSGS*MLTTTRSIWAEGVV
Trigger: GACGACTCCCTCCGCCCAGATGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCGGAGCCAGCGCCTGCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472466.1
CDS-3UTR CAA 90 bp GGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCACAGCGGAGAGGCTCTaGGACGGGGCAGAGCTCGCG +
Preference number: 5 (lower is better)
Translates to: GSSSRLTLGDSGEALGRGTAERL*DGAELA
Trigger: CGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGT...GCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS GCA 90 bp ACCAGCAGGCGCTGGCTCCGCATCTTCACGCCCTGGTCGGGGTCCTaGATGCTCACGACCACCCGCTCCATCCGCCTCGCACCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: TSRRWLRIFTPWSGS*MLTTTRSIRLAPSS
Trigger: TGAGGAAGGTGCGAGGCGGATGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCGGAGCCAGCGCCTGCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168869.12
ENST00000316163.9
CDS GCA 90 bp GCCCTCTGGGTGGACCAAATGACGGACAGATGGGCAGTCCCATGGTaGGTCCAGCAGGGTGCAGCCGGTGTGCAGGGTGAGAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: ALWVDQMTDRWAVPW*VQQGAAGVQGERAA
Trigger: GGCCGCCCTCTCACCCTGCACACCGGCTGCACCCTGCTGGACGCACCATGGGACTGCCCATCTGTCCGTCATTTGGTCCACCCAGAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS GCA 90 bp TTGGTCGGCACCTCGCTGGGGCCAGAGCGGAGGAGGCGGACGCGCTaGGAGTCCTGGCCTGTGTCCCCGCTCTCTCTGACCAGCTTTGTA +
Preference number: 5 (lower is better)
Translates to: LVGTSLGPERRRRTR*ESWPVSPLSLTSFV
Trigger: TACAAAGCTGGTCAGAGAGAGCGGGGACACAGGCCAGGACTCGCAGCGCGTCCGCCTCCTCCGCTCTGGCCCCAGCGAGGTGCCGACCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CCA 90 bp GGAATGACGGTGACCAGCAGGCGCTGGCTCCGCATCTTCACGCCCTaGTCGGGGTCCTGCATGCTCACGACCACCCGCTCCATCCGCCTC +
Preference number: 5 (lower is better)
Translates to: GMTVTSRRWLRIFTP*SGSCMLTTTRSIRL
Trigger: GAGGCGGATGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCGGAGCCAGCGCCTGCTGGTCACCGTCATTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168869.12
ENST00000316163.9
CDS CCA 90 bp TCGCTGCCTGTCACCGCGTGGGGAATGACGGTGACCAGCAGGCGCTaGCTCCGCATCTTCACGCCCTGGTCGGGGTCCTGCATGCTCACG +
Preference number: 5 (lower is better)
Translates to: SLPVTAWGMTVTSRR*LRIFTPWSGSCMLT
Trigger: CGTGAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCGGAGCCAGCGCCTGCTGGTCACCGTCATTCCCCACGCGGTGACAGGCAGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000359740.6
ENST00000397770.8
ENST00000472466.1
ENST00000493449.5
CDS CCA 90 bp GGCTGCACCCCCGAGCCTGACCTGGAACCTGTAGGGCGTCTCGTCTaGCCGGAGCATGAGGCTACGGGGGTCGCGCAGCGGGTAGATGTA +
Preference number: 5 (lower is better)
Translates to: GCTPEPDLEPVGRLV*PEHEATGVAQRVDV
Trigger: TACATCTACCCGCTGCGCGACCCCCGTAGCCTCATGCTCCGGCCAGACGAGACGCCCTACAGGTTCCAGGTCAGGCTCGGGGGTGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359740.6
CDS CCA 90 bp GGAATGACGGTGACCAGCAGGCGCTGGCTCCGCATCTTCACGCCCTaGTCGGGGTCCTGCATGCTCACGACCACCCGCTCCATCTGGGCG +
Preference number: 5 (lower is better)
Translates to: GMTVTSRRWLRIFTP*SGSCMLTTTRSIWA
Trigger: CGCCCAGATGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCGGAGCCAGCGCCTGCTGGTCACCGTCATTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472466.1
CDS CCA 90 bp GATCACTGGGGAACCAGGTGTGACCTTCATTGGTCGGCACCTCGCTaGGGCCAGAGCGGAGGAGGCGGACGCGCTGCGAGTCCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: DHWGTRCDLHWSAPR*GQSGGGGRAASPGL
Trigger: CAGGCCAGGACTCGCAGCGCGTCCGCCTCCTCCGCTCTGGCCCCAGCGAGGTGCCGACCAATGAAGGTCACACCTGGTTCCCCAGTGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS-3UTR CAA 90 bp ACACTGGGCGACAGCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTCTGAGATCCAGGGATaGCTGGGCAGGCACCCCGAC +
Preference number: 5 (lower is better)
Translates to: TLGDSGEALGRGRARAETSEIQG*LGRHPD
Trigger: GTCGGGGTGCCTGCCCAGCAATCCCTGGATCTCAGA...GGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCGCCCAGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp GGAGGCCGCGGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATGTCCGGCTGTCGATGTaGACCCAGTGGGCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: GGRGLEVGKQVPAHLWTNVRLSM*TQWAAP
Trigger: CGGAGCTGCCCACTGGGTCAACATCGACAGCCGGAC...ATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS TCA 90 bp GCGGGGGCCTGTTCACCAGCCAGTAGGTCTGCTCCTGGCACGCAATaGCCAGCCTGTCCCCCTTGCTGCGCTGCTTGGCTGCCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: AGACSPASRSAPGTQ*PACPPCCAAWLPSA
Trigger: AGCTGAGGGCAGCCAAGCAGCGCAGCAAGGGGGACAGGCTGGTCATTGCGTGCCAGGAGCAGACCTACTGGCTGGTGAACAGGCCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316163.9
ENST00000359740.6
ENST00000397770.8
ENST00000477143.5
ENST00000481672.5
ENST00000493449.5
CDS CCA 90 bp ACCTGCACCCCCGAGCCTGACCTGGAACCTGTAGGGCGTCTCGTCTaGCCGGAGCATGAGGCTACGGGGGTCGCGCAGCGGGTAGATGTA +
Preference number: 5 (lower is better)
Translates to: TCTPEPDLEPVGRLV*PEHEATGVAQRVDV
Trigger: TACATCTACCCGCTGCGCGACCCCCGTAGCCTCATGCTCCGGCCAGACGAGACGCCCTACAGGTTCCAGGTCAGGCTCGGGGGTGCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000472466.1
ENST00000493449.5
CDS CCA 90 bp TGGGGAGGGGTACAACCGACGGCAGGTCGGCCCGGGACCCTGATGTaGTTAGGGAGGGCAGGAATGCTGTCCTCAGGCCTTCACAGCCCC +
Preference number: 5 (lower is better)
Translates to: WGGVQPTAGRPGTLM*LGRAGMLSSGLHSP
Trigger: GGGGCTGTGAAGGCCTGAGGACAGCATTCCTGCCCTCCCTAACCACATCAGGGTCCCGGGCCGACCTGCCGTCGGTTGTACCCCTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS-3UTR CAA 90 bp CGACAGCGGAGAGGCTCTTGGACGGGGCAGAGCTCGCGCCGAGACCTGCATGTCTCTGAGATCCAGGGATaGCTGGGCAGGCACCCCGAC +
Preference number: 5 (lower is better)
Translates to: RQRRGSWTGQSSRRDLHVSEIQG*LGRHPD
Trigger: GTCGGGGTGCCTGCCCAGCAATCCCTGGATCTCAGA...GACATGCAGGTCTCGGCGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp GCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCACAGCGGAGAGGCTCTaGGACGGGGCAGAGCTCGCG +
Preference number: 5 (lower is better)
Translates to: ASARHSLGSSSRLTLGDSTAERL*DGAELA
Trigger: CGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGT...GCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS GCA 90 bp GTAGATGGCTGGAAGAACAGGGACAGCCTGCAGAGGGGCCAGCTCTaGCCTGCCTCACGGCATCACCCTGAGGCCCCCAGTCCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: VDGWKNRDSLQRGQL*PASRHHPEAPSPGN
Trigger: GTTCCCAGGACTGGGGGCCTCAGGGTGATGCCGTGAGGCAGGGCAGAGCTGGCCCCTCTGCAGGCTGTCCCTGTTCTTCCAGCCATCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CCA 90 bp GGAATGACGGTGACCAGCAGGCGCTGGCTCCGCATCTTCACGCCCTaGTCGGGGTCCTGCATGCTCACGACCACCCGCTCCATCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GMTVTSRRWLRIFTP*SGSCMLTTTRSIFL
Trigger: GAGGAAGATGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCGGAGCCAGCGCCTGCTGGTCACCGTCATTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359740.6
ENST00000397770.8
ENST00000493449.5
CDS CCA 90 bp AGCCGGGTCCTTCTCACCACATCCGTACTTGCGGTCCAGGACTTTTaGGGAGGGGGCGATGGACCACCAGCCCACGGCGACATGGCGGAG +
Preference number: 5 (lower is better)
Translates to: SRVLLTTSVLAVQDF*GGGDGPPAHGDMAE
Trigger: CTCCGCCATGTCGCCGTGGGCTGGTGGTCCATCGCCCCCTCCCCAAAAGTCCTGGACCGCAAGTACGGATGTGGTGAGAAGGACCCGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CCA 90 bp GGCTGGGGGCCTGCACAAGTCTTGGATGTAGTCACAGTCTGTGCCTaGGGAGGGGTACAACCGACGGCAGGTCGGCCCGGGACCCTGATG +
Preference number: 5 (lower is better)
Translates to: GWGPAQVLDVVTVCA*GGVQPTAGRPGTLM
Trigger: CATCAGGGTCCCGGGCCGACCTGCCGTCGGTTGTACCCCTCCCCAGGCACAGACTGTGACTACATCCAAGACTTGTGCAGGCCCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS-3UTR CAA 90 bp GCCTCAAGGCAGACGGAGGACTTCACTCGGGTCCTGCCCAGCGCTTTCCTGAAGACCAGCCTGTCCCCCTaGCTGCGCTGCTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: ASRQTEDFTRVLPSAFLKTSLSP*LRCLAA
Trigger: GGCAGCCAAGCAGCGCAGCAAGGGGGACAGGCTGGT...CTTCAGGAAAGCGCTGGGCAGGACCCGAGTGAAGTCCTCCGTCTGCCTTGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR CAA 90 bp AGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGACAGCGGAGAGGCTCTaGGACGGGGCAGAGCTCGCG +
Preference number: 5 (lower is better)
Translates to: SLSTALSWVLFQAHTGRQTAERL*DGAELA
Trigger: CGCGAGCTCTGCCCCGTCCAAGAGCCTCTCCGCTGT...CTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp AAGGGGACACTGGTGCTGGGTTCAGCAGCCCCCAGGACCTGGGCCAAGACGGGGCCGGCCTCAGGGTACTaGTCCAGAAGTACGGGGTCT +
Preference number: 5 (lower is better)
Translates to: KGTLVLGSAAPRTWAKTGPASGY*SRSTGS
Trigger: AGACCCCGTACTTCTGGACAAGTACCCTGAGGCCGG...CCCCGTCTTGGCCCAGGTCCTGGGGGCTGCTGAACCCAGCACCAGTGTCCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS TCA 90 bp AGTACGGGGTCTGGAACCTGTAGGGCGTCTCGTCTGGCCGGAGCATaGGGCTACGGGGGTCGCGCAGCGGGTAGATGTAGCCATGCTGCA +
Preference number: 5 (lower is better)
Translates to: STGSGTCRASRLAGA*GYGGRAAGRCSHAA
Trigger: TGCAGCATGGCTACATCTACCCGCTGCGCGACCCCCGTAGCCTCATGCTCCGGCCAGACGAGACGCCCTACAGGTTCCAGACCCCGTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS TCA 90 bp AGGGGCTTGGGGAGGCTGCACCAAGTGCCCTCTGGGTGGACCAAATaGCGGACAGATGGGCAGTCCCATGGTGCGTCCAGCAGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: RGLGRLHQVPSGWTK*RTDGQSHGASSRVQ
Trigger: CTGCACCCTGCTGGACGCACCATGGGACTGCCCATCTGTCCGTCATTTGGTCCACCCAGAGGGCACTTGGTGCAGCCTCCCCAAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS-3UTR CAA 90 bp GACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACAGTCCGGCTGTCGATGTaGACCCAGTGGGCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: DLEAASARHSLGSSSRLTVRLSM*TQWAAP
Trigger: CGGAGCTGCCCACTGGGTCAACATCGACAGCCGGAC...TGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp GCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGGAGCTCCCTGTGGCCTaGGTCTCACCTCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: ASCDGCVGSRPPVHLASGELPVA*VSPLFR
Trigger: CCTGAAGAGAGGTGAGACCAAGGCCACAGGGAGCTC...CCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp ACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATGCCCGCCTGTGCATCTaGCTTCCGGGTATTCGCTGG +
Preference number: 5 (lower is better)
Translates to: TCMSASCDGCVGSRPPVHARLCI*LPGIRW
Trigger: CCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGC...ATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp GAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCTACCGCCGAGAGAGTaGAAGCTGCACCCCCGAAAG +
Preference number: 5 (lower is better)
Translates to: ETCMSASCDGCVGSRPPVLPPRE*KLHPRK
Trigger: CTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAG...CACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS CCA 90 bp TGCTGCGGGGCTCAGATGCTCCCTCTGGTCTGGTCCCTCTGGTTCTaGAGGCCTCCACCTGGAGGGAGGTTGCTGGATCTGCTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: CCGAQMLPLVWSLWF*RPPPGGRLLDLLRS
Trigger: AGACCTCAGCAGATCCAGCAACCTCCCTCCAGGTGGAGGCCTCCAGAACCAGAGGGACCAGACCAGAGGGAGCATCTGAGCCCCGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS-3UTR CAA 90 bp ATCCACCAGGGTGGGGACCTGGGCCTGCGCTCCATATCGAAGCTCCTCACATGCTCTGAGATCCAGGGATaGCTGGGCAGGCACCCCGAC +
Preference number: 5 (lower is better)
Translates to: IHQGGDLGLRSISKLLTCSEIQG*LGRHPD
Trigger: GTCGGGGTGCCTGCCCAGCAATCCCTGGATCTCAGA...GCATGTGAGGAGCTTCGATATGGAGCGCAGGCCCAGGTCCCCACCCTGGTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR CAA 90 bp ACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATGAGCTCCCTGTGGCCTaGGTCTCACCTCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: TCMSASCDGCVGSRPPVHELPVA*VSPLFR
Trigger: CCTGAAGAGAGGTGAGACCAAGGCCACAGGGAGCTC...ATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGCGGACATGCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp CCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGCCCGCCTGTGCATCTaGCTTCCGGGTATTCGCTGG +
Preference number: 5 (lower is better)
Translates to: PRGSLSTALSWVLFQAHTARLCI*LPGIRW
Trigger: CCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGC...AGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp GCAGAGCTCGCGCCGAGACCTGCATGTCCGCGTCTTGTGACGGGTGTGTGGGAACAGCACGGCACTCTCTaGGGTCCTCTTCCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: AELAPRPACPRLVTGVWEQHGTL*GPLPGS
Trigger: TGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTG...TTCCCACACACCCGTCACAAGACGCGGACATGCAGGTCTCGGCGCGAGCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp GCGTCTTGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGGTGTGCTGGACGCTGTaGGGAGTGACTGGATGTGAG +
Preference number: 5 (lower is better)
Translates to: ASCDGCVGSRPPVHLASGVCWTL*GVTGCE
Trigger: CTCACATCCAGTCACTCCCAACAGCGTCCAGCACAC...CCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACAAGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS CCA 90 bp TACTTGTCCAGAAGTACGGGGTCCTCCTCCGAGACGCAGAACTTCTaGGCCAACCACTGCACGACGTCGCTGCCTGTCACCGCGTGGGGA +
Preference number: 5 (lower is better)
Translates to: YLSRSTGSSSETQNF*ANHCTTSLPVTAWG
Trigger: TCCCCACGCGGTGACAGGCAGCGACGTCGTGCAGTGGTTGGCCCAGAAGTTCTGCGTCTCGGAGGAGGACCCCGTACTTCTGGACAAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS CCA 90 bp TTTTGCTGCTGCGGGGCTCAGATGCTCCCTCTGGTCTGGTCCCTCTaGTTCTGGAGGCCTCCACCTGGAGGGAGGTTGCTGGATCTGCTG +
Preference number: 5 (lower is better)
Translates to: FCCCGAQMLPLVWSL*FWRPPPGGRLLDLL
Trigger: CAGCAGATCCAGCAACCTCCCTCCAGGTGGAGGCCTCCAGAACCAGAGGGACCAGACCAGAGGGAGCATCTGAGCCCCGCAGCAGCAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS-3UTR CAA 90 bp CCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATAGGCGCAGCTCCGGTCCGGCTGTCGATGTaGACCCAGTGGGCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: PVDKFWNAFGEGGIGAAPVRLSM*TQWAAP
Trigger: CGGAGCTGCCCACTGGGTCAACATCGACAGCCGGAC...CGGAGCTGCGCCTATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp GCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAGAGCTCCCTGTGGCCTaGGTCTCACCTCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: AGAGAPVDKFWNAFGEGGELPVA*VSPLFR
Trigger: CCTGAAGAGAGGTGAGACCAAGGCCACAGGGAGCTC...TCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp ACCGCCCTACCGCCGAGAGAGTTGAAGCTGCACCCCCGAAAGGAGCCAGCTGTACAGCACGGCACTCTCTaGGGTCCTCTTCCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: TALPPRELKLHPRKEPAVQHGTL*GPLPGS
Trigger: TGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTG...TACAGCTGGCTCCTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAGGGCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp ACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCGTGTGCTGGACGCTGTaGGGAGTGACTGGATGTGAG +
Preference number: 5 (lower is better)
Translates to: TALSWVLFQAHTGRQRRGVCWTL*GVTGCE
Trigger: CTCACATCCAGTCACTCCCAACAGCGTCCAGCACAC...GCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp GACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCTCACACCGGCCTCAGGGTACTaGTCCAGAAGTACGGGGTCT +
Preference number: 5 (lower is better)
Translates to: DLEAASARHSLGSSSRLTPASGY*SRSTGS
Trigger: AGACCCCGTACTTCTGGACAAGTACCCTGAGGCCGG...TGTGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp AGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATCCGGCCTCAGGGTACTaGTCCAGAAGTACGGGGTCC +
Preference number: 5 (lower is better)
Translates to: RCRRTCGQILERVWRGRNPASGY*SRSTGS
Trigger: GGACCCCGTACTTCTGGACAAGTACCCTGAGGCCGG...ATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR CAA 90 bp TCTCTTGGGTCCTCTTCCAGGCTCACACTGGGCGACAGCGGAGAGGCTCTTGGACAGCACGGCACTCTCTaGGGTCCTCTTCCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SLGSSSRLTLGDSGEALGQHGTL*GPLPGS
Trigger: TGAGCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTG...TCCAAGAGCCTCTCCGCTGTCGCCCAGTGTGAGCCTGGAAGAGGACCCAAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp GTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGCTACCGCCGAGAGAGTaGAAGCTGCACCCCCGAAAG +
Preference number: 5 (lower is better)
Translates to: VGKQVPAHLWTNSGTRLALPPRE*KLHPRK
Trigger: CTTTCGGGGGTGCAGCTTCAACTCTCTCGGCGGTAG...CGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp TGTGACGGGTGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGGTGTGCTGGACGCTGTaGGGAGTGACTGGATGTGAG +
Preference number: 5 (lower is better)
Translates to: CDGCVGSRPPVHLASGYSVCWTL*GVTGCE
Trigger: CTCACATCCAGTCACTCCCAACAGCGTCCAGCACAC...CGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACACCCGTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp CCAGGACCTGGGCCAAGACGGGGGTGGCTGCTGCATTCACGCAGGACGTTGAGCTGGAAATCTGCACTCTaGGTCATGAGCACACGGCTG +
Preference number: 5 (lower is better)
Translates to: PGPGPRRGWLLHSRRTLSWKSAL*VMSTRL
Trigger: CAGCCGTGTGCTCATGACCAAGAGTGCAGATTTCCA...GCTCAACGTCCTGCGTGAATGCAGCAGCCACCCCCGTCTTGGCCCAGGTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp TCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTGGGGTAGGTCCCATGCGTGGTaGATCTTCTTGTGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: SGTPGKDPPYGIGPRQWGRSHAW*IFLCSR
Trigger: CCGGCTACACAAGAAGATCAACCACGCATGGGACCT...ACCCCACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp GAGGCCGCGGCCTCGAGGTGGGAAAGCAGGTGCCGGCGCACCTGTGGACAAATTCCAAGGGTCTTTTATTaGTGTGCTGGACGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: EAAASRWESRCRRTCGQIPRVFY*CAGRCW
Trigger: CCAACAGCGTCCAGCACACAAATAAAAGACCCTTGG...AATTTGTCCACAGGTGCGCCGGCACCTGCTTTCCCACCTCGAGGCCGCGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS TCA 90 bp TCTGGTTCTGGAGGCCTCCACCTGGAGGGAGGTTGCTGGATCTGCTaGGGTCTGTCAGAGGCCGTAACCCTGCTTGTCACCCCTCCAATT +
Preference number: 5 (lower is better)
Translates to: SGSGGLHLEGGCWIC*GLSEAVTLLVTPPI
Trigger: AATTGGAGGGGTGACAAGCAGGGTTACGGCCTCTGACAGACCTCAGCAGATCCAGCAACCTCCCTCCAGGTGGAGGCCTCCAGAACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS-3UTR CAA 90 bp TGTGTGGGAAGCCGCCCGCCTGTGCATCTTGCTTCCGGGTATTCGCTGGCTGATAGGTCCCATGCGTGGTaGATCTTCTTGTGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: CVGSRPPVHLASGYSLADRSHAW*IFLCSR
Trigger: CCGGCTACACAAGAAGATCAACCACGCATGGGACCT...ATCAGCCAGCGAATACCCGGAAGCAAGATGCACAGGCGGGCGGCTTCCCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp GAGGATCAGGGACGCCTGGCAAGGATCCACCCTATGGAATCGGGCCTCGTCAGTTCTGCCAGGAGGGCCTaGTACATGTCAGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: EDQGRLARIHPMESGLVSSARRA*YMSDFR
Trigger: CCTGAAGTCTGACATGTACAAGGCCCTCCTGGCAGA...ACTGACGAGGCCCGATTCCATAGGGTGGATCCTTGCCAGGCGTCCCTGATCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp AAGCAGGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGTCTGCCAGGAGGGCCTaGTACATGTCAGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: KQVPAHLWTNSGTRLARESARRA*YMSDFR
Trigger: CCTGAAGTCTGACATGTACAAGGCCCTCCTGGCAGA...CTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS-3UTR CAA 90 bp CCAGTAGGTCTGCTCCTGGCACGCAATGACCAGCCTGTCCCCCTTGCTGCGCTGCCAAGGGTCTTTTATTaGTGTGCTGGACGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: PVGLLLARNDQPVPLAALPRVFY*CAGRCW
Trigger: CCAACAGCGTCCAGCACACAAATAAAAGACCCTTGG...CAGCGCAGCAAGGGGGACAGGCTGGTCATTGCGTGCCAGGAGCAGACCTACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS-3UTR CAA 90 bp GCAGTGACCTCGAGGCAGCCTCAGCACGGCACTCTCTTGGGTCCTCTTCCAGGCCCAAGGGTCTTTTATTaGTGTGCTGGACGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: AVTSRQPQHGTLLGPLPGPRVFY*CAGRCW
Trigger: CCAACAGCGTCCAGCACACAAATAAAAGACCCTTGG...GCCTGGAAGAGGACCCAAGAGAGTGCCGTGCTGAGGCTGCCTCGAGGTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS GCA 90 bp ATGTTGGGTCTGGATGGGACTGGTTTGAACAAAGGGTTTTGCTGCTaGGGGGCTCAGATGCTCCCTCTGGTCTGGTCCCTCTGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: MLGLDGTGLNKGFCC*GAQMLPLVWSLWFW
Trigger: CCAGAACCAGAGGGACCAGACCAGAGGGAGCATCTGAGCCCCGCAGCAGCAAAACCCTTTGTTCAAACCAGTCCCATCCAGACCCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS GCA 90 bp CAGATGTTGGGTCTGGATGGGACTGGTTTGAACAAAGGGTTTTGCTaGTGCGGGGCTCAGATGCTCCCTCTGGTCTGGTCCCTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: QMLGLDGTGLNKGFC*CGAQMLPLVWSLWF
Trigger: GAACCAGAGGGACCAGACCAGAGGGAGCATCTGAGCCCCGCAGCAGCAAAACCCTTTGTTCAAACCAGTCCCATCCAGACCCAACATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS GCA 90 bp TTCCAGATGTTGGGTCTGGATGGGACTGGTTTGAACAAAGGGTTTTaGTGCTGCGGGGCTCAGATGCTCCCTCTGGTCTGGTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: FQMLGLDGTGLNKGF*CCGAQMLPLVWSLW
Trigger: CCAGAGGGACCAGACCAGAGGGAGCATCTGAGCCCCGCAGCAGCAAAACCCTTTGTTCAAACCAGTCCCATCCAGACCCAACATCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CCA 90 bp CCTTCTCATAATCCACCAGGGTCCCCCGTTTTCGGATGTTCTTCTTaGCCAGGTAGATGGCTGGAAGAACAGGGACAGCCTGCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: PSHNPPGSPVFGCSS*PGRWLEEQGQPAEG
Trigger: CCCCTCTGCAGGCTGTCCCTGTTCTTCCAGCCATCTACCTGGCCAAGAAGAACATCCGAAAACGGGGGACCCTGGTGGATTATGAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS-3UTR CAA 90 bp GGTGCCGGCGCACCTGTGGACAAATTCTGGAACGCGTTTGGCGAGGGAGGAATATGGAAATCTGCACTCTaGGTCATGAGCACACGGCTG +
Preference number: 5 (lower is better)
Translates to: GAGAPVDKFWNAFGEGGIWKSAL*VMSTRL
Trigger: CAGCCGTGTGCTCATGACCAAGAGTGCAGATTTCCA...TATTCCTCCCTCGCCAAACGCGTTCCAGAATTTGTCCACAGGTGCGCCGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS CCA 90 bp CCTTGGAGCCCCTTCTTCCAATCAGGGATCTTTCGAGGAGACCTCTaGGGGCCTAAGGTCTGGCGATCTGTGGAATATTCCACGGAACCT +
Preference number: 5 (lower is better)
Translates to: PWSPFFQSGIFRGDL*GPKVWRSVEYSTEP
Trigger: AGGTTCCGTGGAATATTCCACAGATCGCCAGACCTTAGGCCCCCAGAGGTCTCCTCGAAAGATCCCTGATTGGAAGAAGGGGCTCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS TCA 90 bp TCAGCTGCTCCCTCGCCTGCATCAGCACCAGGTCCCATGCGTGGTTaGTCTTCTTGTGTAGCCGGTCATAGCAGTCCTTCTCATAATCCA +
Preference number: 5 (lower is better)
Translates to: SAAPSPASAPGPMRG*SSCVAGHSSPSHNP
Trigger: TGGATTATGAGAAGGACTGCTATGACCGGCTACACAAGAAGATCAACCACGCATGGGACCTGGTGCTGATGCAGGCGAGGGAGCAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000359740.6
ENST00000397770.8
ENST00000477143.5
ENST00000481672.5
ENST00000493449.5
CDS GCA 90 bp CCCTCCACTCCCAGCTCCAGAACTTACCTCCCGCTTATGGAAATCTaGACTCTTGGTCTAGAAGGGGATAGGTGGGCTGCAGTTAGATGC +
Preference number: 5 (lower is better)
Translates to: PSTPSSRTYLPLMEI*TLGLEGDRWAAVRC
Trigger: GCATCTAACTGCAGCCCACCTATCCCCTTCTAGACCAAGAGTGCAGATTTCCATAAGCGGGAGGTAAGTTCTGGAGCTGGGAGTGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS-3UTR CAA 90 bp GGTCTTTTATTTGTGTGCTGGACGCTGTTGGGAGTGACTGGATGTGAGCCAGCCAGGTCCCATGCGTGGTaGATCTTCTTGTGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: GLLFVCWTLLGVTGCEPARSHAW*IFLCSR
Trigger: CCGGCTACACAAGAAGATCAACCACGCATGGGACCT...GGCTGGCTCACATCCAGTCACTCCCAACAGCGTCCAGCACACAAATAAAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
CDS CCA 90 bp TTCCAATCAGGGATCTTTCGAGGAGACCTCTGGGGGCCTAAGGTCTaGCGATCTGTGGAATATTCCACGGAACCTCAGGTTCTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: FQSGIFRGDLWGPKV*RSVEYSTEPQVLKV
Trigger: AACTTTGAGAACCTGAGGTTCCGTGGAATATTCCACAGATCGCCAGACCTTAGGCCCCCAGAGGTCTCCTCGAAAGATCCCTGATTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CCA 90 bp TGCGAGTCCTGGCCTGTGTCCCCGCTCTCTCTGACCAGCTTTGTATaGGGAAATGTTAGGGTCGTGAACTTAAGAAGTTTTATCAGTGAG +
Preference number: 5 (lower is better)
Translates to: CESWPVSPLSLTSFV*GNVRVVNLRSFISE
Trigger: CTCACTGATAAAACTTCTTAAGTTCACGACCCTAACATTTCCCCATACAAAGCTGGTCAGAGAGAGCGGGGACACAGGCCAGGACTCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CCA 72 bp GCTCCATCTGGGCGGAGGGAGTCGTCAGGGGGTGTCTaGCCGCCCCGCAACCCTGATTCCCTGGCACCGGCC +
Preference number: 6 (lower is better)
Translates to: APSGRRESSGGV*PPRNPDSLAPA
Trigger: GGCCGGTGCCAGGGAATCAGGGTTGCGGGGCGGCCAGACACCCCCTGACGACTCCCTCCGCCCAGATGGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472466.1
CDS CCA 72 bp CCCGAGCCTGACCTGGAACCTGTAGGGCGTCTCGTCTaGCCGGAGCATGAGGCTACGGGGGTCGCGCAGCGG +
Preference number: 6 (lower is better)
Translates to: PEPDLEPVGRLV*PEHEATGVAQR
Trigger: CCGCTGCGCGACCCCCGTAGCCTCATGCTCCGGCCAGACGAGACGCCCTACAGGTTCCAGGTCAGGCTCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359740.6
ENST00000472466.1
ENST00000493449.5
CDS CCA 72 bp TCGGGGTCCTGCATGCTCACGACCACCCGCTCCATCTaGGCGGAGGGAGTCGTCAGGGGGTGTCTGGCCGCC +
Preference number: 6 (lower is better)
Translates to: SGSCMLTTTRSI*AEGVVRGCLAA
Trigger: GGCGGCCAGACACCCCCTGACGACTCCCTCCGCCCAGATGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472466.1
CDS CCA 72 bp GGGGAGGGGGCGATGGACCACCAGCCCACGGCGACATaGCGGAGTCCCACTCCAATCCCAGCAAGCTCGGCG +
Preference number: 6 (lower is better)
Translates to: GEGAMDHQPTAT*RSPTPIPASSA
Trigger: CGCCGAGCTTGCTGGGATTGGAGTGGGACTCCGCCATGTCGCCGTGGGCTGGTGGTCCATCGCCCCCTCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS GCA 72 bp CGCTGGCTCCGCATCTTCACGCCCTGGTCGGGGTCCTaGATGCTCACGACCACCCGCTCCATCCGCCTCGCA +
Preference number: 6 (lower is better)
Translates to: RWLRIFTPWSGS*MLTTTRSIRLA
Trigger: TGCGAGGCGGATGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCGGAGCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168869.12
ENST00000316163.9
CDS GCA 72 bp GGCTCCGCATCTTCACGCCCTGGTCGGGGTCCTGCATaGTCACGACCACCCGCTCCATCTGGGCGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: GSASSRPGRGPA*SRPPAPSGRRE
Trigger: CTCCCTCCGCCCAGATGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472466.1
CDS GCA 72 bp CGCTGGCTCCGCATCTTCACGCCCTGGTCGGGGTCCTaGATGCTCACGACCACCCGCTCCATCTGGGCGGAG +
Preference number: 6 (lower is better)
Translates to: RWLRIFTPWSGS*MLTTTRSIWAE
Trigger: CTCCGCCCAGATGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCGGAGCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472466.1
CDS CCA 72 bp GTGACCAGCAGGCGCTGGCTCCGCATCTTCACGCCCTaGTCGGGGTCCTGCATGCTCACGACCACCCGCTCC +
Preference number: 6 (lower is better)
Translates to: VTSRRWLRIFTP*SGSCMLTTTRS
Trigger: GGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCGGAGCCAGCGCCTGCTGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000359740.6
ENST00000397770.8
ENST00000472466.1
ENST00000493449.5
CDS CCA 72 bp GTCACCGCGTGGGGAATGACGGTGACCAGCAGGCGCTaGCTCCGCATCTTCACGCCCTGGTCGGGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: VTAWGMTVTSRR*LRIFTPWSGSC
Trigger: GCAGGACCCCGACCAGGGCGTGAAGATGCGGAGCCAGCGCCTGCTGGTCACCGTCATTCCCCACGCGGTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000359740.6
ENST00000397770.8
ENST00000472466.1
ENST00000493449.5
CDS CCA 72 bp GAAGTACGGGGTCTGGAACCTGTAGGGCGTCTCGTCTaGCCGGAGCATGAGGCTACGGGGGTCGCGCAGCGG +
Preference number: 6 (lower is better)
Translates to: EVRGLEPVGRLV*PEHEATGVAQR
Trigger: CCGCTGCGCGACCCCCGTAGCCTCATGCTCCGGCCAGACGAGACGCCCTACAGGTTCCAGACCCCGTACTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS CCA 72 bp GGGCCAGAGCGGAGGAGGCGGACGCGCTGCGAGTCCTaGCCTGTGTCCCCGCTCTCTCTGACCAGCTTTGTA +
Preference number: 6 (lower is better)
Translates to: GPERRRRTRCES*PVSPLSLTSFV
Trigger: TACAAAGCTGGTCAGAGAGAGCGGGGACACAGGCCAGGACTCGCAGCGCGTCCGCCTCCTCCGCTCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CCA 72 bp GGAACCAGGTGTGACCTTCATTGGTCGGCACCTCGCTaGGGCCAGAGCGGAGGAGGCGGACGCGCTGCGAGT +
Preference number: 6 (lower is better)
Translates to: GTRCDLHWSAPR*GQSGGGGRAAS
Trigger: ACTCGCAGCGCGTCCGCCTCCTCCGCTCTGGCCCCAGCGAGGTGCCGACCAATGAAGGTCACACCTGGTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS TCA 72 bp CCTGGAACCTGTAGGGCGTCTCGTCTGGCCGGAGCATaGGGCTACGGGGGTCGCGCAGCGGGTAGATGTAGC +
Preference number: 6 (lower is better)
Translates to: PGTCRASRLAGA*GYGGRAAGRCS
Trigger: GCTACATCTACCCGCTGCGCGACCCCCGTAGCCTCATGCTCCGGCCAGACGAGACGCCCTACAGGTTCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359740.6
ENST00000472466.1
ENST00000493449.5
CDS CCA 72 bp GGATTGCTGGGCAGGCACCCCGACACGAGGGGATCGTaGGGTCCACGCTGGCCGCAGAAACTCAGGTACCTG +
Preference number: 6 (lower is better)
Translates to: GLLGRHPDTRGS*GPRWPQKLRYL
Trigger: CAGGTACCTGAGTTTCTGCGGCCAGCGTGGACCCCACGATCCCCTCGTGTCGGGGTGCCTGCCCAGCAATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS TCA 72 bp TCTGGAACCTGTAGGGCGTCTCGTCTGGCCGGAGCATaGGGCTACGGGGGTCGCGCAGCGGGTAGATGTAGC +
Preference number: 6 (lower is better)
Translates to: SGTCRASRLAGA*GYGGRAAGRCS
Trigger: GCTACATCTACCCGCTGCGCGACCCCCGTAGCCTCATGCTCCGGCCAGACGAGACGCCCTACAGGTTCCAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316163.9
ENST00000397770.8
CDS GCA 72 bp CGCTGGCTCCGCATCTTCACGCCCTGGTCGGGGTCCTaGATGCTCACGACCACCCGCTCCATCTTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: RWLRIFTPWSGS*MLTTTRSIFLR
Trigger: TCTGAGGAAGATGGAGCGGGTGGTCGTGAGCATGCAGGACCCCGACCAGGGCGTGAAGATGCGGAGCCAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359740.6
ENST00000397770.8
ENST00000493449.5
CDS CCA 72 bp GCCGGCCTCAGGGTACTTGTCCAGAAGTACGGGGTCTaGCGTGGTGCAGGGAGAAGGTGTCCAGGACGCCTG +
Preference number: 6 (lower is better)
Translates to: AGLRVLVQKYGV*RGAGRRCPGRL
Trigger: CAGGCGTCCTGGACACCTTCTCCCTGCACCACGCCAGACCCCGTACTTCTGGACAAGTACCCTGAGGCCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CCA 72 bp TGCGGGGCTCAGATGCTCCCTCTGGTCTGGTCCCTCTaGTTCTGGAGGCCTCCACCTGGAGGGAGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: CGAQMLPLVWSL*FWRPPPGGRLL
Trigger: CAGCAACCTCCCTCCAGGTGGAGGCCTCCAGAACCAGAGGGACCAGACCAGAGGGAGCATCTGAGCCCCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CAA 72 bp CCAGTCCTGGGAACTTGTCTGGGGCCAGCCGTCCCCTaGCTCACCATAGTCCAGCTCTGCAGCCGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: PVLGTCLGPAVP*LTIVQLCSRPQ
Trigger: CTGAGGCCGGCTGCAGAGCTGGACTATGGTGAGCAAGGGGACGGCTGGCCCCAGACAAGTTCCCAGGACTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS TCA 72 bp GGGAGGCTGCACCAAGTGCCCTCTGGGTGGACCAAATaGCGGACAGATGGGCAGTCCCATGGTGCGTCCAGC +
Preference number: 6 (lower is better)
Translates to: GRLHQVPSGWTK*RTDGQSHGASS
Trigger: GCTGGACGCACCATGGGACTGCCCATCTGTCCGTCATTTGGTCCACCCAGAGGGCACTTGGTGCAGCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS GCA 72 bp TCCTCCTCCGAGACGCAGAACTTCTGGGCCAACCACTaGACGACGTCGCTGCCTGTCACCGCGTGGGGAATG +
Preference number: 6 (lower is better)
Translates to: SSSETQNFWANH*TTSLPVTAWGM
Trigger: CATTCCCCACGCGGTGACAGGCAGCGACGTCGTGCAGTGGTTGGCCCAGAAGTTCTGCGTCTCGGAGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000359740.6
ENST00000397770.8
ENST00000472466.1
ENST00000493449.5
CDS GCA 72 bp GGGCCAGCCGTCCCCTTGCTCACCATAGTCCAGCTCTaGAGCCGGCCTCAGGGTACTTGTCCAGAAGTACGG +
Preference number: 6 (lower is better)
Translates to: GPAVPLLTIVQL*SRPQGTCPEVR
Trigger: CCGTACTTCTGGACAAGTACCCTGAGGCCGGCTGCAGAGCTGGACTATGGTGAGCAAGGGGACGGCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS GCA 72 bp GTGGACCAAATGACGGACAGATGGGCAGTCCCATGGTaGGTCCAGCAGGGTGCAGCCGGTGTGCAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: VDQMTDRWAVPW*VQQGAAGVQGE
Trigger: CTCACCCTGCACACCGGCTGCACCCTGCTGGACGCACCATGGGACTGCCCATCTGTCCGTCATTTGGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CCA 72 bp CTTCTCACCACATCCGTACTTGCGGTCCAGGACTTTTaGGGAGGGGGCGATGGACCACCAGCCCACGGCGAC +
Preference number: 6 (lower is better)
Translates to: LLTTSVLAVQDF*GGGDGPPAHGD
Trigger: GTCGCCGTGGGCTGGTGGTCCATCGCCCCCTCCCCAAAAGTCCTGGACCGCAAGTACGGATGTGGTGAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CCA 72 bp GTACAACCGACGGCAGGTCGGCCCGGGACCCTGATGTaGTTAGGGAGGGCAGGAATGCTGTCCTCAGGCCTT +
Preference number: 6 (lower is better)
Translates to: VQPTAGRPGTLM*LGRAGMLSSGL
Trigger: AAGGCCTGAGGACAGCATTCCTGCCCTCCCTAACCACATCAGGGTCCCGGGCCGACCTGCCGTCGGTTGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CCA 72 bp CCTGCACAAGTCTTGGATGTAGTCACAGTCTGTGCCTaGGGAGGGGTACAACCGACGGCAGGTCGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: PAQVLDVVTVCA*GGVQPTAGRPG
Trigger: CCCGGGCCGACCTGCCGTCGGTTGTACCCCTCCCCAGGCACAGACTGTGACTACATCCAAGACTTGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CCA 72 bp CCAAGTGCCCTCTGGGTGGACCAAATGACGGACAGATaGGCAGTCCCATGGTGCGTCCAGCAGGGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: PSALWVDQMTDR*AVPWCVQQGAA
Trigger: GGCTGCACCCTGCTGGACGCACCATGGGACTGCCCATCTGTCCGTCATTTGGTCCACCCAGAGGGCACTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CCA 72 bp GAGCAGGGGCTTGGGGAGGCTGCACCAAGTGCCCTCTaGGTGGACCAAATGACGGACAGATGGGCAGTCCCA +
Preference number: 6 (lower is better)
Translates to: EQGLGEAAPSAL*VDQMTDRWAVP
Trigger: TGGGACTGCCCATCTGTCCGTCATTTGGTCCACCCAGAGGGCACTTGGTGCAGCCTCCCCAAGCCCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CCA 72 bp TTTTGCTGCTGCGGGGCTCAGATGCTCCCTCTGGTCTaGTCCCTCTGGTTCTGGAGGCCTCCACCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: FCCCGAQMLPLV*SLWFWRPPPGG
Trigger: CCCTCCAGGTGGAGGCCTCCAGAACCAGAGGGACCAGACCAGAGGGAGCATCTGAGCCCCGCAGCAGCAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CAA 90 bp CCCCTTGCTCACCATAGTCCAGCTCTGCAGCCGGCCTCAGGGTACTaGTCCAGAAGTACGGGGTCTGGCGTGGTGCAGGGAGAAGGTGTC +
Preference number: 6 (lower is better)
Translates to: PLAHHSPALQPASGY*SRSTGSGVVQGEGV
Trigger: GACACCTTCTCCCTGCACCACGCCAGACCCCGTACTTCTGGACAAGTACCCTGAGGCCGGCTGCAGAGCTGGACTATGGTGAGCAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS TCA 72 bp GGAGGCCTCCACCTGGAGGGAGGTTGCTGGATCTGCTaGGGTCTGTCAGAGGCCGTAACCCTGCTTGTCACC +
Preference number: 6 (lower is better)
Translates to: GGLHLEGGCWIC*GLSEAVTLLVT
Trigger: GGTGACAAGCAGGGTTACGGCCTCTGACAGACCTCAGCAGATCCAGCAACCTCCCTCCAGGTGGAGGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CCA 72 bp AGAAGTACGGGGTCCTCCTCCGAGACGCAGAACTTCTaGGCCAACCACTGCACGACGTCGCTGCCTGTCACC +
Preference number: 6 (lower is better)
Translates to: RSTGSSSETQNF*ANHCTTSLPVT
Trigger: GGTGACAGGCAGCGACGTCGTGCAGTGGTTGGCCCAGAAGTTCTGCGTCTCGGAGGAGGACCCCGTACTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS CCA 72 bp GCTCAGATGCTCCCTCTGGTCTGGTCCCTCTGGTTCTaGAGGCCTCCACCTGGAGGGAGGTTGCTGGATCTG +
Preference number: 6 (lower is better)
Translates to: AQMLPLVWSLWF*RPPPGGRLLDL
Trigger: CAGATCCAGCAACCTCCCTCCAGGTGGAGGCCTCCAGAACCAGAGGGACCAGACCAGAGGGAGCATCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CCA 72 bp AAGGGTTTTGCTGCTGCGGGGCTCAGATGCTCCCTCTaGTCTGGTCCCTCTGGTTCTGGAGGCCTCCACCTG +
Preference number: 6 (lower is better)
Translates to: KGFAAAGLRCSL*SGPSGSGGLHL
Trigger: CAGGTGGAGGCCTCCAGAACCAGAGGGACCAGACCAGAGGGAGCATCTGAGCCCCGCAGCAGCAAAACCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CAA 72 bp TGGCATAGTCCAGCTCTGCAGCCGGCCTCAGGGTACTaGTCCAGAAGTACGGGGTCCTCCTCCGAGACGCAG +
Preference number: 6 (lower is better)
Translates to: WHSPALQPASGY*SRSTGSSSETQ
Trigger: CTGCGTCTCGGAGGAGGACCCCGTACTTCTGGACAAGTACCCTGAGGCCGGCTGCAGAGCTGGACTATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000168869.12
CDS CAA 72 bp CACCATAGTCCAGCTCTGCAGCCGGCCTCAGGGTACTaGTCCAGAAGTACGGGGTCTGGCGTGGTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: HHSPALQPASGY*SRSTGSGVVQG
Trigger: TCCCTGCACCACGCCAGACCCCGTACTTCTGGACAAGTACCCTGAGGCCGGCTGCAGAGCTGGACTATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CAA 72 bp TGGCATAGTCCAGCTCTGCAGCCGGCCTCAGGGTACTaGTCCAGAAGTACGGGGTCTGGCGTGGTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: WHSPALQPASGY*SRSTGSGVVQG
Trigger: TCCCTGCACCACGCCAGACCCCGTACTTCTGGACAAGTACCCTGAGGCCGGCTGCAGAGCTGGACTATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493449.5
CDS CAA 90 bp CTGGTCTGGTCCCTCTGGTTCTGGAGGCCTCCACCTGGAGGGAGGTaGCTGGATCTGCTGAGGTCTGTCAGAGGCCGTAACCCTGCTTGT +
Preference number: 6 (lower is better)
Translates to: LVWSLWFWRPPPGGR*LDLLRSVRGRNPAC
Trigger: ACAAGCAGGGTTACGGCCTCTGACAGACCTCAGCAGATCCAGCAACCTCCCTCCAGGTGGAGGCCTCCAGAACCAGAGGGACCAGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CAA 90 bp CCAGGTAGATGGCATAGTCCAGCTCTGCAGCCGGCCTCAGGGTACTaGTCCAGAAGTACGGGGTCTGGCGTGGTGCAGGGAGAAGGTGTC +
Preference number: 6 (lower is better)
Translates to: PGRWHSPALQPASGY*SRSTGSGVVQGEGV
Trigger: GACACCTTCTCCCTGCACCACGCCAGACCCCGTACTTCTGGACAAGTACCCTGAGGCCGGCTGCAGAGCTGGACTATGCCATCTACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493449.5
CDS CCA 72 bp AAGGGTTTTGCTGCTGCGGGGCTCAGATGCTCCCTCTaGTCTGGTCCCTCTGGTTCTGGAGGCCTCCACCAT +
Preference number: 6 (lower is better)
Translates to: KGFAAAGLRCSL*SGPSGSGGLHH
Trigger: ATGGTGGAGGCCTCCAGAACCAGAGGGACCAGACCAGAGGGAGCATCTGAGCCCCGCAGCAGCAAAACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493449.5
CDS GCA 72 bp GGTCTGGATGGGACTGGTTTGAACAAAGGGTTTTGCTaGTGCGGGGCTCAGATGCTCCCTCTGGTCTGGTCC +
Preference number: 6 (lower is better)
Translates to: GLDGTGLNKGFC*CGAQMLPLVWS
Trigger: GGACCAGACCAGAGGGAGCATCTGAGCCCCGCAGCAGCAAAACCCTTTGTTCAAACCAGTCCCATCCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS TCA 72 bp CCCTCGCCTGCATCAGCACCAGGTCCCATGCGTGGTTaGTCTTCTTGTGTAGCCGGTCATAGCAGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: PSPASAPGPMRG*SSCVAGHSSPS
Trigger: AGAAGGACTGCTATGACCGGCTACACAAGAAGATCAACCACGCATGGGACCTGGTGCTGATGCAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000359740.6
ENST00000397770.8
ENST00000477143.5
ENST00000481672.5
ENST00000493449.5
CDS GCA 72 bp GTTCTTCTTGGCCAGGTAGATGGCATAGTCCAGCTCTaGAGCCGGCCTCAGGGTACTTGTCCAGAAGTACGG +
Preference number: 6 (lower is better)
Translates to: VLLGQVDGIVQL*SRPQGTCPEVR
Trigger: CCGTACTTCTGGACAAGTACCCTGAGGCCGGCTGCAGAGCTGGACTATGCCATCTACCTGGCCAAGAAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000168869.12
ENST00000316163.9
ENST00000397770.8
ENST00000481672.5
ENST00000493449.5
CDS GCA 72 bp TTGGGTCTGGATGGGACTGGTTTGAACAAAGGGTTTTaGTGCTGCGGGGCTCAGATGCTCCCTCTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: LGLDGTGLNKGF*CCGAQMLPLVW
Trigger: CCAGACCAGAGGGAGCATCTGAGCCCCGCAGCAGCAAAACCCTTTGTTCAAACCAGTCCCATCCAGACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CAA 72 bp GTTGGGTCTGGATGGGACTGGTTTGAACAAAGGGTTTaGCTGCTGCGGGGCTCAGATGCTCCCTCTGGTCTG +
Preference number: 6 (lower is better)
Translates to: VGSGWDWFEQRV*LLRGSDAPSGL
Trigger: CAGACCAGAGGGAGCATCTGAGCCCCGCAGCAGCAAAACCCTTTGTTCAAACCAGTCCCATCCAGACCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CAA 90 bp TTTCCAGATGTTGGGTCTGGATGGGACTGGTTTGAACAAAGGGTTTaGCTGCTGCGGGGCTCAGATGCTCCCTCTGGTCTGGTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: FPDVGSGWDWFEQRV*LLRGSDAPSGLVPL
Trigger: CAGAGGGACCAGACCAGAGGGAGCATCTGAGCCCCGCAGCAGCAAAACCCTTTGTTCAAACCAGTCCCATCCAGACCCAACATCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CCA 72 bp AATCCACCAGGGTCCCCCGTTTTCGGATGTTCTTCTTaGCCAGGTAGATGGCTGGAAGAACAGGGACAGCCT +
Preference number: 6 (lower is better)
Translates to: NPPGSPVFGCSS*PGRWLEEQGQP
Trigger: AGGCTGTCCCTGTTCTTCCAGCCATCTACCTGGCCAAGAAGAACATCCGAAAACGGGGGACCCTGGTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CCA 72 bp GGGATCTTTCGAGGAGACCTCTGGGGGCCTAAGGTCTaGCGATCTGTGGAATATTCCACGGAACCTCAGGTT +
Preference number: 6 (lower is better)
Translates to: GIFRGDLWGPKV*RSVEYSTEPQV
Trigger: AACCTGAGGTTCCGTGGAATATTCCACAGATCGCCAGACCTTAGGCCCCCAGAGGTCTCCTCGAAAGATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS GCA 72 bp CCCAGCTCCAGAACTTACCTCCCGCTTATGGAAATCTaGACTCTTGGTCTAGAAGGGGATAGGTGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: PSSRTYLPLMEI*TLGLEGDRWAA
Trigger: TGCAGCCCACCTATCCCCTTCTAGACCAAGAGTGCAGATTTCCATAAGCGGGAGGTAAGTTCTGGAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CCA 72 bp GAGGAGACCTCTGGGGGCCTAAGGTCTGGCGATCTGTaGAATATTCCACGGAACCTCAGGTTCTCAAAGTTG +
Preference number: 6 (lower is better)
Translates to: EETSGGLRSGDL*NIPRNLRFSKL
Trigger: CAACTTTGAGAACCTGAGGTTCCGTGGAATATTCCACAGATCGCCAGACCTTAGGCCCCCAGAGGTCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477143.5
CDS CAA 90 bp GTTCTAGGTGCATCTTTCCAGATGTTGGGTCTGGATGGGACTGGTTaGAACAAAGGGTTTTGCTGCTGCGGGGCTCAGATGCTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: VLGASFQMLGLDGTG*NKGFCCCGAQMLPL
Trigger: CAGAGGGAGCATCTGAGCCCCGCAGCAGCAAAACCCTTTGTTCAAACCAGTCCCATCCAGACCCAACATCTGGAAAGATGCACCTAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS TCA 72 bp CATCTTTCCAGATGTTGGGTCTGGATGGGACTGGTTTaGACAAAGGGTTTTGCTGCTGCGGGGCTCAGATGC +
Preference number: 6 (lower is better)
Translates to: HLSRCWVWMGLV*TKGFAAAGLRC
Trigger: GCATCTGAGCCCCGCAGCAGCAAAACCCTTTGTTCAAACCAGTCCCATCCAGACCCAACATCTGGAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS GCA 72 bp TTTCCTGAAGTACTCGATCTCCCGCTTATGGAAATCTaGACTCTTGGTCATGAGCACACGGCTGGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: FPEVLDLPLMEI*TLGHEHTAGSA
Trigger: TGCGCTGCCAGCCGTGTGCTCATGACCAAGAGTGCAGATTTCCATAAGCGGGAGATCGAGTACTTCAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316163.9
ENST00000359740.6
ENST00000397770.8
ENST00000481672.5
CDS CCA 72 bp AGGTGCATCTTTCCAGATGTTGGGTCTGGATGGGACTaGTTTGAACAAAGGGTTTTGCTGCTGCGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: RCIFPDVGSGWD*FEQRVLLLRGS
Trigger: TGAGCCCCGCAGCAGCAAAACCCTTTGTTCAAACCAGTCCCATCCAGACCCAACATCTGGAAAGATGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CCA 72 bp GGTTCTAGGTGCATCTTTCCAGATGTTGGGTCTGGATaGGACTGGTTTGAACAAAGGGTTTTGCTGCTGCGG +
Preference number: 6 (lower is better)
Translates to: GSRCIFPDVGSG*DWFEQRVLLLR
Trigger: CCGCAGCAGCAAAACCCTTTGTTCAAACCAGTCCCATCCAGACCCAACATCTGGAAAGATGCACCTAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CCA 72 bp TGGCCTGTGTCCCCGCTCTCTCTGACCAGCTTTGTATaGGGAAATGTTAGGGTCGTGAACTTAAGAAGTTTT +
Preference number: 6 (lower is better)
Translates to: WPVSPLSLTSFV*GNVRVVNLRSF
Trigger: AAAACTTCTTAAGTTCACGACCCTAACATTTCCCCATACAAAGCTGGTCAGAGAGAGCGGGGACACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CCA 72 bp AACACATACTTGAGAAATACTACTAATGGGGATCACTaGGGAACCAGGTGTGACCTTCATTGGTCGGCACCT +
Preference number: 6 (lower is better)
Translates to: NTYLRNTTNGDH*GTRCDLHWSAP
Trigger: AGGTGCCGACCAATGAAGGTCACACCTGGTTCCCCAGTGATCCCCATTAGTAGTATTTCTCAAGTATGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CAA 90 bp TTAAGAAGTTTTATCAGTGAGGTTCTAGGTGCATCTTTCCAGATGTaGGGTCTGGATGGGACTGGTTTGAACAAAGGGTTTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LRSFISEVLGASFQM*GLDGTGLNKGFCCC
Trigger: GCAGCAGCAAAACCCTTTGTTCAAACCAGTCCCATCCAGACCCAACATCTGGAAAGATGCACCTAGAACCTCACTGATAAAACTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5
CDS CAA 72 bp TTTATCAGTGAGGTTCTAGGTGCATCTTTCCAGATGTaGGGTCTGGATGGGACTGGTTTGAACAAAGGGTTT +
Preference number: 6 (lower is better)
Translates to: FISEVLGASFQM*GLDGTGLNKGF
Trigger: AAACCCTTTGTTCAAACCAGTCCCATCCAGACCCAACATCTGGAAAGATGCACCTAGAACCTCACTGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477143.5
ENST00000493449.5