Pregenerated sensors for RGS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000090104Ensembl transcript IDs: ENST00000367459.8, ENST00000462589.1, ENST00000469578.2, ENST00000474373.1, ENST00000498352.1, ENST00000583155.1
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGCATTTTCTTATCCAAAACAAGAGCACTCATTAAGGACTCCCTaGCATGCAGTTCTGGTCAGTAACAATACCCTTAACCCTTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: SAFSYPKQEHSLRTP*HAVLVSNNTLNPSL Trigger: GAGGGAAGGGTTAAGGGTATTGTTACTGACCAGAACTGCATGTCAGGGAGTCCTTAATGAGTGCTCTTGTTTTGGATAAGAAAATGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| 3UTR CAA 90 bp | AGTACCACAGTATCTTCCTCCTTCTGCGGTCTCTCTGTTTTTGTCTaGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTA | + |
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Preference number: 2 (lower is better) Translates to: STTVSSSFCGLSVFV*LMLLQLCAWITFML Trigger: TAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAGACAAAAACAGAGAGACCGCAGAAGGAGGAAGATACTGTGGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTTGTTCCAAATTTCCTCATAGTATAGTTAGGAGAGGCAAAAGAAGCAGACCTCATCATGGCAGCTaGTTTTGTAAAATCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: CLCSKFPHSIVRRGKRSRPHHGS*FCKISL Trigger: GAGACTGATTTTACAAAACCAGCTGCCATGATGAGG...TCTGCTTCTTTTGCCTCTCCTAACTATACTATGAGGAAATTTGGAACAAAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| 3UTR-3UTR CAA 90 bp | GTCTTGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATAGTCATTTGTTCTTCTaGGCCTGTCAAGACACCCAA | + |
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Preference number: 3 (lower is better) Translates to: VLLMLLQLCAWITFMLIHSHLFF*ACQDTQ Trigger: TTGGGTGTCTTGACAGGCCAAGAAGAACAAATGACT...ATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| 3UTR TCA 72 bp | TCTTATCCAAAACAAGAGCACTCATTAAGGACTCCCTaGCATGCAGTTCTGGTCAGTAACAATACCCTTAAC | + |
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Preference number: 3 (lower is better) Translates to: SYPKQEHSLRTP*HAVLVSNNTLN Trigger: GTTAAGGGTATTGTTACTGACCAGAACTGCATGTCAGGGAGTCCTTAATGAGTGCTCTTGTTTTGGATAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| 3UTR CAA 72 bp | CACCCAGGGAGCCATACTGGCACATTCCTTCTGCGCTaGATACTATCTGTTAATTCCCTTCAGCCAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: HPGSHTGTFLLR*ILSVNSLQPGT Trigger: GGTCCCTGGCTGAAGGGAATTAACAGATAGTATCAAGCGCAGAAGGAATGTGCCAGTATGGCTCCCTGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR GCA 90 bp | CACCCAGGGAGCCATACTGGCACATTCCTTCTGCGCTTGATACTATCTGTTAATAGTGGAGATGGCTGCTaGGCGCATGGTGCTCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: HPGSHTGTFLLRLILSVNSGDGC*AHGALS Trigger: GCTAAGAGCACCATGCGCGCAGCAGCCATCTCCACT...ATTAACAGATAGTATCAAGCGCAGAAGGAATGTGCCAGTATGGCTCCCTGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CCA 90 bp | CACCCAGGGAGCCATACTGGCACATTCCTTCTGCGCTTGATACTATCTGTTAATACTTTGGAGTGGAGATaGCTGCTGCGCGCATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: HPGSHTGTFLLRLILSVNTLEWR*LLRAWC Trigger: GCACCATGCGCGCAGCAGCCATCTCCACTCCAAAGT...ATTAACAGATAGTATCAAGCGCAGAAGGAATGTGCCAGTATGGCTCCCTGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR GCA 90 bp | TCCCTCACCCTCATCATGGCAGCTGGTTTTGTAAAATCAGTCTCTTTATTCTACAGTGGAGATGGCTGCTaGGCGCATGGTGCTCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: SLTLIMAAGFVKSVSLFYSGDGC*AHGALS Trigger: GCTAAGAGCACCATGCGCGCAGCAGCCATCTCCACT...GTAGAATAAAGAGACTGATTTTACAAAACCAGCTGCCATGATGAGGGTGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| 3UTR CAA 72 bp | CCACAGTATCTTCCTCCTTCTGCGGTCTCTCTGTTTTaGTCTTGCTTATGCTTCTTCAACTCTGCGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PQYLPPSAVSLF*SCLCFFNSAPG Trigger: TCCAGGCGCAGAGTTGAAGAAGCATAAGCAAGACAAAAACAGAGAGACCGCAGAAGGAGGAAGATACTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR GCA 90 bp | GTCTTGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATTGGAGTGGAGATGGCTaGTGCGCGCATGGTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VLLMLLQLCAWITFMLIHWSGDG*CAHGAL Trigger: AAGAGCACCATGCGCGCAGCAGCCATCTCCACTCCA...ATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR GCA 90 bp | ATGGCAGCTGGTTTTGTAAAATCAGTCTCTTTATTCTACTGTGCTGAAACCCTCTGGAGTGGAGATGGCTaGTGCGCGCATGGTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: MAAGFVKSVSLFYCAETLWSGDG*CAHGAL Trigger: AAGAGCACCATGCGCGCAGCAGCCATCTCCACTCCA...GAGGGTTTCAGCACAGTAGAATAAAGAGACTGATTTTACAAAACCAGCTGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR GCA 90 bp | CACCCAGGGAGCCATACTGGCACATTCCTTCTGCGCTTGATACTATCTGTTAATACACGTGGGGGTTGGTaGTTTAATCTTCTTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HPGSHTGTFLLRLILSVNTRGGW*FNLLGC Trigger: ACAGCCAAGAAGATTAAAGCACCAACCCCCACGTGT...ATTAACAGATAGTATCAAGCGCAGAAGGAATGTGCCAGTATGGCTCCCTGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CCA 90 bp | ATGGCAGCTGGTTTTGTAAAATCAGTCTCTTTATTCTACTGTGCTGAAACCCTCACTTTGGAGTGGAGATaGCTGCTGCGCGCATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: MAAGFVKSVSLFYCAETLTLEWR*LLRAWC Trigger: GCACCATGCGCGCAGCAGCCATCTCCACTCCAAAGT...GAGGGTTTCAGCACAGTAGAATAAAGAGACTGATTTTACAAAACCAGCTGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR CCA 90 bp | TTCATAGACTTTAGTCACAGTTTCTGTGTAACTAGAGTTACCTGGCCTTCCCAGCCCAGGGAGCCATACTaGCACATTCCTTCTGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: FIDFSHSFCVTRVTWPSQPREPY*HIPSAL Trigger: AAGCGCAGAAGGAATGTGCCAGTATGGCTCCCTGGG...CTGGGAAGGCCAGGTAACTCTAGTTACACAGAAACTGTGACTAAAGTCTATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR TCA 90 bp | CACCCAGGGAGCCATACTGGCACATTCCTTCTGCGCTTGATACTATCTGTTAATTCGTCTAGAAGTGAATaGGTGGTTCCTTTCAATTCC | + |
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Preference number: 4 (lower is better) Translates to: HPGSHTGTFLLRLILSVNSSRSE*VVPFNS Trigger: GGAATTGAAAGGAACCACTCATTCACTTCTAGACGA...ATTAACAGATAGTATCAAGCGCAGAAGGAATGTGCCAGTATGGCTCCCTGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR GCA 90 bp | CACCCAGGGAGCCATACTGGCACATTCCTTCTGCGCTTGATACTATCTGTTAATATGCTTCTTCAACTCTaGGCCTGGATAACTTTCATG | + |
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Preference number: 4 (lower is better) Translates to: HPGSHTGTFLLRLILSVNMLLQL*AWITFM Trigger: CATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCAT...ATTAACAGATAGTATCAAGCGCAGAAGGAATGTGCCAGTATGGCTCCCTGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CCA 90 bp | GTCTTGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATTGTCTAACTTTGGAGTaGAGATGGCTGCTGCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: VLLMLLQLCAWITFMLIHCLTLE*RWLLRA Trigger: TGCGCGCAGCAGCCATCTCCACTCCAAAGTTAGACA...ATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CCA 90 bp | ATGGCAGCTGGTTTTGTAAAATCAGTCTCTTTATTCTACTGTGCTGAAACCCTCTGTCTAACTTTGGAGTaGAGATGGCTGCTGCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: MAAGFVKSVSLFYCAETLCLTLE*RWLLRA Trigger: TGCGCGCAGCAGCCATCTCCACTCCAAAGTTAGACA...GAGGGTTTCAGCACAGTAGAATAAAGAGACTGATTTTACAAAACCAGCTGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR CCA 90 bp | CTTAACCCTTCCCTCACCCTCATCATGGCAGCTGGTTTTGTAAAATCAGTCTCTCCTCATCATGGCAGCTaGTTTTGTAAAATCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LNPSLTLIMAAGFVKSVSPHHGS*FCKISL Trigger: GAGACTGATTTTACAAAACCAGCTGCCATGATGAGG...AGAGACTGATTTTACAAAACCAGCTGCCATGATGAGGGTGAGGGAAGGGTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR GCA 90 bp | GGGAGCCATACTGGCACATTCCTTCTGCGCTTGATACTATCTGTTAATTCCCTTTTTTTGTCTTGCTTATaGTTCTTCAACTCTGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: GSHTGTFLLRLILSVNSLFLSCL*FFNSAP Trigger: AGGCGCAGAGTTGAAGAAGCATAAGCAAGACAAAAA...AAGGGAATTAACAGATAGTATCAAGCGCAGAAGGAATGTGCCAGTATGGCTCCC 43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR GCA 90 bp | TTCATAGACTTTAGTCACAGTTTCTGTGTAACTAGAGTTACCTGGCCTTCCCAGGTATCTTCCTCCTTCTaGGGTCTCTCTGTTTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: FIDFSHSFCVTRVTWPSQVSSSF*GLSVFV Trigger: GACAAAAACAGAGAGACCGCAGAAGGAGGAAGATAC...CTGGGAAGGCCAGGTAACTCTAGTTACACAGAAACTGTGACTAAAGTCTATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CCA 90 bp | CTTAACCCTTCCCTCACCCTCATCATGGCAGCTGGTTTTGTAAAATCAGTCTCTTTTGACCAGTTTGGTTaGCAAGAAGTTTTTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LNPSLTLIMAAGFVKSVSFDQFG*QEVFPE Trigger: CTCTGGAAAAACTTCTTGCCAACCAAACTGGTCAAA...AGAGACTGATTTTACAAAACCAGCTGCCATGATGAGGGTGAGGGAAGGGTTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR CCA 90 bp | TTCATAGACTTTAGTCACAGTTTCTGTGTAACTAGAGTTACCTGGCCTTCCCAGAAAACACGTGGGGGTTaGTGCTTTAATCTTCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: FIDFSHSFCVTRVTWPSQKTRGG*CFNLLG Trigger: GCCAAGAAGATTAAAGCACCAACCCCCACGTGTTTT...CTGGGAAGGCCAGGTAACTCTAGTTACACAGAAACTGTGACTAAAGTCTATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CCA 90 bp | GGGAGCCATACTGGCACATTCCTTCTGCGCTTGATACTATCTGTTAATTCCCTTCTTCAACTCTGCGCCTaGATAACTTTCATGTTAATC | + |
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Preference number: 4 (lower is better) Translates to: GSHTGTFLLRLILSVNSLLQLCA*ITFMLI Trigger: GATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAG...AAGGGAATTAACAGATAGTATCAAGCGCAGAAGGAATGTGCCAGTATGGCTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR TCA 90 bp | TCCCTCACCCTCATCATGGCAGCTGGTTTTGTAAAATCAGTCTCTTTATTCTACTCGTCTAGAAGTGAATaGGTGGTTCCTTTCAATTCC | + |
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Preference number: 4 (lower is better) Translates to: SLTLIMAAGFVKSVSLFYSSRSE*VVPFNS Trigger: GGAATTGAAAGGAACCACTCATTCACTTCTAGACGA...GTAGAATAAAGAGACTGATTTTACAAAACCAGCTGCCATGATGAGGGTGAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR TCA 90 bp | GGGAGCCATACTGGCACATTCCTTCTGCGCTTGATACTATCTGTTAATTCCCTTAGTTTTTCCAGAGATTaGGACCATTGCATTACTTCA | + |
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Preference number: 4 (lower is better) Translates to: GSHTGTFLLRLILSVNSLSFSRD*DHCITS Trigger: TGAAGTAATGCAATGGTCTCAATCTCTGGAAAAACT...AAGGGAATTAACAGATAGTATCAAGCGCAGAAGGAATGTGCCAGTATGGCTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR TCA 90 bp | TTCATAGACTTTAGTCACAGTTTCTGTGTAACTAGAGTTACCTGGCCTTCCCAGCTTCCAAAGACATTTTaGCCAGTTTGGTTGGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: FIDFSHSFCVTRVTWPSQLPKTF*PVWLAR Trigger: TCTTGCCAACCAAACTGGTCAAAATGTCTTTGGAAG...CTGGGAAGGCCAGGTAACTCTAGTTACACAGAAACTGTGACTAAAGTCTATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CCA 90 bp | TTCATAGACTTTAGTCACAGTTTCTGTGTAACTAGAGTTACCTGGCCTTCCCAGGTCATTTGTTCTTCTTaGCCTGTCAAGACACCCAAA | + |
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Preference number: 4 (lower is better) Translates to: FIDFSHSFCVTRVTWPSQVICSS*PVKTPK Trigger: TTTGGGTGTCTTGACAGGCCAAGAAGAACAAATGAC...CTGGGAAGGCCAGGTAACTCTAGTTACACAGAAACTGTGACTAAAGTCTATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CCA 90 bp | TCCCTCACCCTCATCATGGCAGCTGGTTTTGTAAAATCAGTCTCTTTATTCTACCCTGACATGCAGTTCTaGTCAGTAACAATACCCTTA | + |
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Preference number: 4 (lower is better) Translates to: SLTLIMAAGFVKSVSLFYPDMQF*SVTIPL Trigger: TAAGGGTATTGTTACTGACCAGAACTGCATGTCAGG...GTAGAATAAAGAGACTGATTTTACAAAACCAGCTGCCATGATGAGGGTGAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR TCA 90 bp | TGTCTTTGTTCCAAATTTCCTCATAGTATAGTTAGGAGAGGCAAAAGAAGCAGATCATTAAGGACTCCCTaGCATGCAGTTCTGGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: CLCSKFPHSIVRRGKRSRSLRTP*HAVLVS Trigger: ACTGACCAGAACTGCATGTCAGGGAGTCCTTAATGA...TCTGCTTCTTTTGCCTCTCCTAACTATACTATGAGGAAATTTGGAACAAAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR CCA 90 bp | TTCATAGACTTTAGTCACAGTTTCTGTGTAACTAGAGTTACCTGGCCTTCCCAGCAGAAAGTACATCCTTaGACTTGGAAGATTTCATTC | + |
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Preference number: 4 (lower is better) Translates to: FIDFSHSFCVTRVTWPSQQKVHP*TWKISF Trigger: GAATGAAATCTTCCAAGTCCAAGGATGTACTTTCTG...CTGGGAAGGCCAGGTAACTCTAGTTACACAGAAACTGTGACTAAAGTCTATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CCA 90 bp | GTCTTGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATTTTGACCAGTTTGGTTaGCAAGAAGTTTTTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VLLMLLQLCAWITFMLIHFDQFG*QEVFPE Trigger: CTCTGGAAAAACTTCTTGCCAACCAAACTGGTCAAA...ATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR TCA 90 bp | ATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATTCTGAGTCAAGTAAATATCTGATTTaGGGAACCTGGGATAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: MLLQLCAWITFMLIHSESSKYLI*GTWDKS Trigger: ACTCTTATCCCAGGTTCCTCAAATCAGATATTTACT...TGACTCAGAATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR TCA 90 bp | ATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATTCTGAGTCACATGTTAATCCATTCTaGGTCATTTGTTCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: MLLQLCAWITFMLIHSESHVNPF*VICSSW Trigger: CCAAGAAGAACAAATGACTCAGAATGGATTAACATG...TGACTCAGAATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR TCA 90 bp | GTCTTGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATCTTACAAATATATTCTaGCTCCCTGGTTTTAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VLLMLLQLCAWITFMLIHLTNIF*LPGFKS Trigger: GCTCTTAAAACCAGGGAGTCAGAATATATTTGTAAG...ATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR GCA 90 bp | TTCATAGACTTTAGTCACAGTTTCTGTGTAACTAGAGTTACCTGGCCTTCCCAGCATAGATCTCAGGTATaGTTTCATATCCATTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: FIDFSHSFCVTRVTWPSQHRSQV*FHIHSK Trigger: TTTGGAATGGATATGAAAGCATACCTGAGATCTATG...CTGGGAAGGCCAGGTAACTCTAGTTACACAGAAACTGTGACTAAAGTCTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR GCA 90 bp | TTCATAGACTTTAGTCACAGTTTCTGTGTAACTAGAGTTACCTGGCCTTCCCAGATATATGACTTTTTGTaGTTCATCAAAACACGTGGG | + |
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Preference number: 4 (lower is better) Translates to: FIDFSHSFCVTRVTWPSQIYDFL*FIKTRG Trigger: CCCACGTGTTTTGATGAAGCACAAAAAGTCATATAT...CTGGGAAGGCCAGGTAACTCTAGTTACACAGAAACTGTGACTAAAGTCTATGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CCA 90 bp | CTTGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATTCTCCTTTCAATTCCTTTaGGTTAGCAGAGAAGAACAT | + |
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Preference number: 4 (lower is better) Translates to: LAYASSTLRLDNFHVNPFSFQFL*VSREEH Trigger: ATGTTCTTCTCTGCTAACCCAAAGGAATTGAAAGGA...GAATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CCA 90 bp | GTCTTGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATCTAGAAGTGAATGAGTaGTTCCTTTCAATTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VLLMLLQLCAWITFMLIHLEVNE*FLSIPL Trigger: CAAAGGAATTGAAAGGAACCACTCATTCACTTCTAG...ATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CCA 90 bp | ATGGCAGCTGGTTTTGTAAAATCAGTCTCTTTATTCTACTGTGCTGAAACCCTCCTAGAAGTGAATGAGTaGTTCCTTTCAATTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: MAAGFVKSVSLFYCAETLLEVNE*FLSIPL Trigger: CAAAGGAATTGAAAGGAACCACTCATTCACTTCTAG...GAGGGTTTCAGCACAGTAGAATAAAGAGACTGATTTTACAAAACCAGCTGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR CCA 90 bp | ATGGCAGCTGGTTTTGTAAAATCAGTCTCTTTATTCTACTGTGCTGAAACCCTCCAGAAAGTACATCCTTaGACTTGGAAGATTTCATTC | + |
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Preference number: 4 (lower is better) Translates to: MAAGFVKSVSLFYCAETLQKVHP*TWKISF Trigger: GAATGAAATCTTCCAAGTCCAAGGATGTACTTTCTG...GAGGGTTTCAGCACAGTAGAATAAAGAGACTGATTTTACAAAACCAGCTGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR GCA 90 bp | ATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATTCTGAGTCATTTAGGCTATTAGCCTaGAGGTCATTTAGAAGATTT | + |
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Preference number: 4 (lower is better) Translates to: MLLQLCAWITFMLIHSESFRLLA*RSFRRF Trigger: AAATCTTCTAAATGACCTGCAGGCTAATAGCCTAAA...TGACTCAGAATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CCA 90 bp | ATGGCAGCTGGTTTTGTAAAATCAGTCTCTTTATTCTACTGTGCTGAAACCCTCGGTAATACTGTTAATTaGAAATACTTTTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: MAAGFVKSVSLFYCAETLGNTVN*KYFCCC Trigger: GCAGCAGCAAAAGTATTTCCAATTAACAGTATTACC...GAGGGTTTCAGCACAGTAGAATAAAGAGACTGATTTTACAAAACCAGCTGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR TCA 90 bp | TGTCTTTGTTCCAAATTTCCTCATAGTATAGTTAGGAGAGGCAAAAGAAGCAGAAGTTTTTCCAGAGATTaGGACCATTGCATTACTTCA | + |
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Preference number: 4 (lower is better) Translates to: CLCSKFPHSIVRRGKRSRSFSRD*DHCITS Trigger: TGAAGTAATGCAATGGTCTCAATCTCTGGAAAAACT...TCTGCTTCTTTTGCCTCTCCTAACTATACTATGAGGAAATTTGGAACAAAGACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR TCA 90 bp | TGTCTTTGTTCCAAATTTCCTCATAGTATAGTTAGGAGAGGCAAAAGAAGCAGATTTATTCTACTGTGCTaGAACCCTCACCAATATAGA | + |
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Preference number: 4 (lower is better) Translates to: CLCSKFPHSIVRRGKRSRFILLC*NPHQYR Trigger: TCTATATTGGTGAGGGTTTCAGCACAGTAGAATAAA...TCTGCTTCTTTTGCCTCTCCTAACTATACTATGAGGAAATTTGGAACAAAGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS TCA 90 bp | AAGCTGTTCACCCAGGGAGCCATACTGGCACATTCCTTCTGCGCTTaGTACTATCTGTTAATTCCCTTCAGCCAGGGACCAGTCACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KLFTQGAILAHSFCA*YYLLIPFSQGPVTL Trigger: TAAAGTGACTGGTCCCTGGCTGAAGGGAATTAACAGATAGTATCAAGCGCAGAAGGAATGTGCCAGTATGGCTCCCTGGGTGAACAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367459.8 ENST00000498352.1 |
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| CDS-3UTR CAA 90 bp | CACCCAGGGAGCCATACTGGCACATTCCTTCTGCGCTTGATACTATCTGTTAATAGTCATTTGTTCTTCTaGGCCTGTCAAGACACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HPGSHTGTFLLRLILSVNSHLFF*ACQDTQ Trigger: TTGGGTGTCTTGACAGGCCAAGAAGAACAAATGACT...ATTAACAGATAGTATCAAGCGCAGAAGGAATGTGCCAGTATGGCTCCCTGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CAA 90 bp | CTTAACCCTTCCCTCACCCTCATCATGGCAGCTGGTTTTGTAAAATCAGTCTCTCAGAGATTGAGACCATaGCATTACTTCAGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LNPSLTLIMAAGFVKSVSQRLRP*HYFSSR Trigger: TCTGCTGCTGAAGTAATGCAATGGTCTCAATCTCTG...AGAGACTGATTTTACAAAACCAGCTGCCATGATGAGGGTGAGGGAAGGGTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR CAA 90 bp | GTCTTGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATGCATTTTGTCTAACTTaGGAGTGGAGATGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLLMLLQLCAWITFMLIHAFCLT*EWRWLL Trigger: CAGCAGCCATCTCCACTCCAAAGTTAGACAAAATGC...ATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CAA 90 bp | ATGGCAGCTGGTTTTGTAAAATCAGTCTCTTTATTCTACTGTGCTGAAACCCTCGCATTTTGTCTAACTTaGGAGTGGAGATGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MAAGFVKSVSLFYCAETLAFCLT*EWRWLL Trigger: CAGCAGCCATCTCCACTCCAAAGTTAGACAAAATGC...GAGGGTTTCAGCACAGTAGAATAAAGAGACTGATTTTACAAAACCAGCTGCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR CAA 90 bp | TTCATAGACTTTAGTCACAGTTTCTGTGTAACTAGAGTTACCTGGCCTTCCCAGGCGGTCTCTCTGTTTTaGTCTTGCTTATGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FIDFSHSFCVTRVTWPSQAVSLF*SCLCFF Trigger: GAAGAAGCATAAGCAAGACAAAAACAGAGAGACCGC...CTGGGAAGGCCAGGTAACTCTAGTTACACAGAAACTGTGACTAAAGTCTATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CAA 90 bp | CTTGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATTCCAGAGATTGAGACCATaGCATTACTTCAGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LAYASSTLRLDNFHVNPFQRLRP*HYFSSR Trigger: TCTGCTGCTGAAGTAATGCAATGGTCTCAATCTCTG...GAATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CAA 90 bp | ATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATTCTGAGTCAGGTGCTTTAATCTTCTaGGCTGTAGATTCTCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MLLQLCAWITFMLIHSESGALIF*AVDSRV Trigger: CACTCGAGAATCTACAGCCAAGAAGATTAAAGCACC...TGACTCAGAATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CAA 90 bp | ATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATTCTGAGTCAAACATTCCTGGCATTTaGTCTAACTTTGGAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MLLQLCAWITFMLIHSESNIPGI*SNFGVE Trigger: CTCCACTCCAAAGTTAGACAAAATGCCAGGAATGTT...TGACTCAGAATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CAA 90 bp | TTCATAGACTTTAGTCACAGTTTCTGTGTAACTAGAGTTACCTGGCCTTCCCAGGACATTTTGACCAGTTaGGTTGGCAAGAAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FIDFSHSFCVTRVTWPSQDILTS*VGKKFF Trigger: GAAAAACTTCTTGCCAACCAAACTGGTCAAAATGTC...CTGGGAAGGCCAGGTAACTCTAGTTACACAGAAACTGTGACTAAAGTCTATGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CAA 90 bp | TCCCTCACCCTCATCATGGCAGCTGGTTTTGTAAAATCAGTCTCTTTATTCTACGACATTTTGACCAGTTaGGTTGGCAAGAAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLTLIMAAGFVKSVSLFYDILTS*VGKKFF Trigger: GAAAAACTTCTTGCCAACCAAACTGGTCAAAATGTC...GTAGAATAAAGAGACTGATTTTACAAAACCAGCTGCCATGATGAGGGTGAGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR CAA 90 bp | GTCTTGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATACTTCCAAAGACATTTaGACCAGTTTGGTTGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLLMLLQLCAWITFMLIHTSKDI*TSLVGK Trigger: CTTGCCAACCAAACTGGTCAAAATGTCTTTGGAAGT...ATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CAA 90 bp | TTCATAGACTTTAGTCACAGTTTCTGTGTAACTAGAGTTACCTGGCCTTCCCAGACATTCCTTCTGCGCTaGATACTATCTGTTAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: FIDFSHSFCVTRVTWPSQTFLLR*ILSVNS Trigger: GGAATTAACAGATAGTATCAAGCGCAGAAGGAATGT...CTGGGAAGGCCAGGTAACTCTAGTTACACAGAAACTGTGACTAAAGTCTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CAA 90 bp | ATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATTCTGAGTCATCCATTCTGAGTCATTaGTTCTTCTTGGCCTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: MLLQLCAWITFMLIHSESSILSH*FFLACQ Trigger: TTGACAGGCCAAGAAGAACAAATGACTCAGAATGGA...TGACTCAGAATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS CCA 90 bp | AAAGGTCCTAATCTCAGTAGAATTGTAATGCCCAAGACAAGGGGATaGCAAGCTGATTTCATTCTTTACCTTCTCTCATCAGAAAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGPNLSRIVMPKTRG*QADFILYLLSSENL Trigger: GAGATTTTCTGATGAGAGAAGGTAAAGAATGAAATCAGCTTGCCATCCCCTTGTCTTGGGCATTACAATTCTACTGAGATTAGGACCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498352.1 |
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| CDS-3UTR CAA 90 bp | CTTGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATTCGCAGAAAGTACATCCTaGGACTTGGAAGATTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LAYASSTLRLDNFHVNPFAESTS*DLEDFI Trigger: AATGAAATCTTCCAAGTCCAAGGATGTACTTTCTGC...GAATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CAA 90 bp | GTCTTGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATGTGCGGAAGTCAATATaGATTTGTTTAGCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: VLLMLLQLCAWITFMLIHVRKSI*ICLAAS Trigger: AGATGCTGCTAAACAAATCAATATTGACTTCCGCAC...ATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CAA 90 bp | TTCATAGACTTTAGTCACAGTTTCTGTGTAACTAGAGTTACCTGGCCTTCCCAGAGATGTCAGTTGACTTaGATTCTTACAGTCTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FIDFSHSFCVTRVTWPSQRCQLT*ILTVCC Trigger: ACAACAGACTGTAAGAATCAAAGTCAACTGACATCT...CTGGGAAGGCCAGGTAACTCTAGTTACACAGAAACTGTGACTAAAGTCTATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CAA 90 bp | TGTCTTTGTTCCAAATTTCCTCATAGTATAGTTAGGAGAGGCAAAAGAAGCAGAAACATTCCTGGCATTTaGTCTAACTTTGGAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLCSKFPHSIVRRGKRSRNIPGI*SNFGVE Trigger: CTCCACTCCAAAGTTAGACAAAATGCCAGGAATGTT...TCTGCTTCTTTTGCCTCTCCTAACTATACTATGAGGAAATTTGGAACAAAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR CAA 90 bp | CTTGCTTATGCTTCTTCAACTCTGCGCCTGGATAACTTTCATGTTAATCCATTCAAGTTTTTCCAGAGATaGAGACCATTGCATTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LAYASSTLRLDNFHVNPFKFFQR*RPLHYF Trigger: GAAGTAATGCAATGGTCTCAATCTCTGGAAAAACTT...GAATGGATTAACATGAAAGTTATCCAGGCGCAGAGTTGAAGAAGCATAAGCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367459.8 |
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| CDS-3UTR CAA 90 bp | TGTCTTTGTTCCAAATTTCCTCATAGTATAGTTAGGAGAGGCAAAAGAAGCAGAACTTCCAAAGACATTTaGACCAGTTTGGTTGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLCSKFPHSIVRRGKRSRTSKDI*TSLVGK Trigger: CTTGCCAACCAAACTGGTCAAAATGTCTTTGGAAGT...TCTGCTTCTTTTGCCTCTCCTAACTATACTATGAGGAAATTTGGAACAAAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS-3UTR CAA 90 bp | TGTCTTTGTTCCAAATTTCCTCATAGTATAGTTAGGAGAGGCAAAAGAAGCAGAAAGTTTTTCCAGAGATaGAGACCATTGCATTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLCSKFPHSIVRRGKRSRKFFQR*RPLHYF Trigger: GAAGTAATGCAATGGTCTCAATCTCTGGAAAAACTT...TCTGCTTCTTTTGCCTCTCCTAACTATACTATGAGGAAATTTGGAACAAAGACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS TCA 90 bp | GAAACTGATGATGATAAGCTTAATACTCACTTGTTTAGCAGCATCTaGATGCACAAATGCTTTATATATCTCTTCTGCTTTACAGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ETDDDKLNTHLFSSI*MHKCFIYLFCFTGQ Trigger: TTGCCCTGTAAAGCAGAAGAGATATATAAAGCATTTGTGCATTCAGATGCTGCTAAACAAGTGAGTATTAAGCTTATCATCATCAGTTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469578.2 |
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| CDS CAA 90 bp | CAAGCTGTTCACCCAGGGAGCCATACTGGCACATTCCTTCTGCGCTaGATACTATCTGTTAATTCCCTTCAGCCAGGGACCAGTCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: QAVHPGSHTGTFLLR*ILSVNSLQPGTSHF Trigger: AAAGTGACTGGTCCCTGGCTGAAGGGAATTAACAGATAGTATCAAGCGCAGAAGGAATGTGCCAGTATGGCTCCCTGGGTGAACAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367459.8 ENST00000498352.1 |
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| CDS CAA 72 bp | TCATCAAAACACGTGGGGGTTGGTGCTTTAATCTTCTaGGCTGTAGATTCTCGAGTGCGGAAGTCAATATTG | + |
|
Preference number: 6 (lower is better) Translates to: SSKHVGVGALIF*AVDSRVRKSIL Trigger: CAATATTGACTTCCGCACTCGAGAATCTACAGCCAAGAAGATTAAAGCACCAACCCCCACGTGTTTTGATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367459.8 ENST00000498352.1 |
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| CDS CAA 72 bp | GGAATCTGGGGCCAGACAAACTCATTCATAGTCACATaGCTACTTGATGGTGGCTACCAAACTGTTTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GIWGQTNSFIVT*LLDGGYQTVLL Trigger: AAGCAAAACAGTTTGGTAGCCACCATCAAGTAGCAATGTGACTATGAATGAGTTTGTCTGGCCCCAGATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498352.1 |
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| CDS GCA 72 bp | TCCAGATTCCAGATGTGGGATCATAGATCTCAGGTATaGTTTCATATCCATTCCAAAAGTCTTTGGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRFQMWDHRSQV*FHIHSKSLWPP Trigger: AGGAGGCCAAAGACTTTTGGAATGGATATGAAAGCATACCTGAGATCTATGATCCCACATCTGGAATCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367459.8 ENST00000462589.1 ENST00000469578.2 ENST00000498352.1 |
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| CDS GCA 72 bp | TCACATTGCTACTTGATGGTGGCTACCAAACTGTTTTaGTTCTATCCGCGGTTTGAATTGAAATTCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SHCYLMVATKLF*FYPRFELKFCS Trigger: GGAGCAGAATTTCAATTCAAACCGCGGATAGAAGCAAAACAGTTTGGTAGCCACCATCAAGTAGCAATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498352.1 |
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| CDS CAA 72 bp | TATCTCAACCACCTTCAAGGCAGTAAGAGACTGTCTTaGATTTTGAATCCTTGGTACCTCTACAATGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: YLNHLQGSKRLS*ILNPWYLYNVL Trigger: GAGGACATTGTAGAGGTACCAAGGATTCAAAATCAAAGACAGTCTCTTACTGCCTTGAAGGTGGTTGAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498352.1 |
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| CDS CAA 90 bp | ATGTATCTCAACCACCTTCAAGGCAGTAAGAGACTGTCTTTGATTTaGAATCCTTGGTACCTCTACAATGTCCTCTACATAAGGGTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: MYLNHLQGSKRLSLI*NPWYLYNVLYIRVR Trigger: TCTCACCCTTATGTAGAGGACATTGTAGAGGTACCAAGGATTCAAAATCAAAGACAGTCTCTTACTGCCTTGAAGGTGGTTGAGATACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498352.1 |
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| CDS CAA 90 bp | AAAGACATTTTGACCAGTTTGGTTGGCAAGAAGTTTTTCCAGAGATaGAGACCATTGCATTACTTCAGCAGCAGAAAGTACATCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: KDILTSLVGKKFFQR*RPLHYFSSRKYILG Trigger: TCCAAGGATGTACTTTCTGCTGCTGAAGTAATGCAATGGTCTCAATCTCTGGAAAAACTTCTTGCCAACCAAACTGGTCAAAATGTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367459.8 ENST00000469578.2 |
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| CDS CCA 72 bp | AATCTCAGTAGAATTGTAATGCCCAAGACAAGGGGATaGCAAGCTGATTTCATTCTTTACCTTCTCTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: NLSRIVMPKTRG*QADFILYLLSS Trigger: TGATGAGAGAAGGTAAAGAATGAAATCAGCTTGCCATCCCCTTGTCTTGGGCATTACAATTCTACTGAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498352.1 |
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| CDS CAA 72 bp | AACCACCTTCAAGGCAGTAAGAGACTGTCTTTGATTTaGAATCCTTGGTACCTCTACAATGTCCTCTACATA | + |
|
Preference number: 6 (lower is better) Translates to: NHLQGSKRLSLI*NPWYLYNVLYI Trigger: TATGTAGAGGACATTGTAGAGGTACCAAGGATTCAAAATCAAAGACAGTCTCTTACTGCCTTGAAGGTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498352.1 |
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| CDS CAA 90 bp | TATGTTATGTATCTCAACCACCTTCAAGGCAGTAAGAGACTGTCTTaGATTTTGAATCCTTGGTACCTCTACAATGTCCTCTACATAAGG | + |
|
Preference number: 6 (lower is better) Translates to: YVMYLNHLQGSKRLS*ILNPWYLYNVLYIR Trigger: CCTTATGTAGAGGACATTGTAGAGGTACCAAGGATTCAAAATCAAAGACAGTCTCTTACTGCCTTGAAGGTGGTTGAGATACATAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498352.1 |
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| CDS TCA 72 bp | TACTTACTTTGGTTGGCAAGAAGTTTTTCCAGAGATTaGGACCATTGCATTACTTCAGCAGCAGAAAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: YLLWLARSFSRD*DHCITSAAEST Trigger: TGTACTTTCTGCTGCTGAAGTAATGCAATGGTCTCAATCTCTGGAAAAACTTCTTGCCAACCAAAGTAAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498352.1 |
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| CDS CAA 90 bp | TCAATAGTTATACTTACTTTGGTTGGCAAGAAGTTTTTCCAGAGATaGAGACCATTGCATTACTTCAGCAGCAGAAAGTACATCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SIVILTLVGKKFFQR*RPLHYFSSRKYILG Trigger: TCCAAGGATGTACTTTCTGCTGCTGAAGTAATGCAATGGTCTCAATCTCTGGAAAAACTTCTTGCCAACCAAAGTAAGTATAACTATTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498352.1 |
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| CDS TCA 72 bp | TACTTACTTTGGTTGGCAAGAAGTTTTTCCAGAGATTaGGACCATTGCATTACTTCAGCAGCAGAAAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: YLLWLARSFSRD*DHCITSAAESK Trigger: TTTACTTTCTGCTGCTGAAGTAATGCAATGGTCTCAATCTCTGGAAAAACTTCTTGCCAACCAAAGTAAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000474373.1 |
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| CDS TCA 72 bp | CTTCCTATTCATACAAAGGTAAGAGACAGCTACTGCTaGAATAGCTGTGTTATAGATTGTAGAGATGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LPIHTKVRDSYC*NSCVIDCRDEK Trigger: CTTCTCATCTCTACAATCTATAACACAGCTATTTCAGCAGTAGCTGTCTCTTACCTTTGTATGAATAGGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498352.1 |
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| CDS GCA 72 bp | TCCAGATTCCAGATGTGGGATCATAGATCTCAGGTATaGTTTCATATCCATTCCACTACAAAAGACATAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SRFQMWDHRSQV*FHIHSTTKDIK Trigger: TTTTATGTCTTTTGTAGTGGAATGGATATGAAAGCATACCTGAGATCTATGATCCCACATCTGGAATCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583155.1 |
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| CDS TCA 72 bp | CTACCAAACTGTTTTGCTTCTATCCGCGGTTTGAATTaGAATTCTGCTCCACTGAATATAAAACCATCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LPNCFASIRGLN*NSAPLNIKPSF Trigger: AAAAGATGGTTTTATATTCAGTGGAGCAGAATTTCAATTCAAACCGCGGATAGAAGCAAAACAGTTTGGTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498352.1 |
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| CDS CCA 72 bp | AACCCAGAAACATTCAATAGTTATACTTACTTTGGTTaGCAAGAAGTTTTTCCAGAGATTGAGACCATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: NPETFNSYTYFG*QEVFPEIETIA Trigger: TGCAATGGTCTCAATCTCTGGAAAAACTTCTTGCCAACCAAAGTAAGTATAACTATTGAATGTTTCTGGGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000474373.1 ENST00000498352.1 |
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