Pregenerated sensors for RGPD8 (Homo sapiens)
Ensembl gene IDs: ENSG00000169629Ensembl transcript IDs: ENST00000302558.8
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GTGCAGTGGTACAATCACAGCTCACTAGCCTCAAGCGATTCTCCAGCCTCAGCCATAGAATCCTTTCATTaGCTTCTGTCGAGGCGACGG | + |
|
Preference number: 4 (lower is better) Translates to: VQWYNHSSLASSDSPASAIESFH*LLSRRR Trigger: CCGTCGCCTCGACAGAAGTCAATGAAAGGATTCTAT...GGCTGAGGCTGGAGAATCGCTTGAGGCTAGTGAGCTGTGATTGTACCACTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302558.8 |
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| CDS-3UTR TCA 90 bp | GTGCAGTGGTACAATCACAGCTCACTAGCCTCAAGCGATTCTCCAGCCTCAGCCTTTTCTTCCTCATCTTaGGCAACCGCAGCAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VQWYNHSSLASSDSPASAFSSSS*ATAASF Trigger: AAAACTTGCTGCGGTTGCTCAAGATGAGGAAGAAAA...GGCTGAGGCTGGAGAATCGCTTGAGGCTAGTGAGCTGTGATTGTACCACTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302558.8 |
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| CDS-3UTR CAA 90 bp | GTGCAGTGGTACAATCACAGCTCACTAGCCTCAAGCGATTCTCCAGCCTCAGCCAATAGAATCCTTTCATaGACTTCTGTCGAGGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: VQWYNHSSLASSDSPASANRILS*TSVEAT Trigger: CGTCGCCTCGACAGAAGTCAATGAAAGGATTCTATT...GGCTGAGGCTGGAGAATCGCTTGAGGCTAGTGAGCTGTGATTGTACCACTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302558.8 |
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| CDS-3UTR CAA 90 bp | GTGCAGTGGTACAATCACAGCTCACTAGCCTCAAGCGATTCTCCAGCCTCAGCCATTTTCTTCCTCATCTaGAGCAACCGCAGCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VQWYNHSSLASSDSPASAIFFLI*SNRSKF Trigger: AAACTTGCTGCGGTTGCTCAAGATGAGGAAGAAAAT...GGCTGAGGCTGGAGAATCGCTTGAGGCTAGTGAGCTGTGATTGTACCACTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302558.8 |
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