Pregenerated sensors for RGPD6 (Homo sapiens)

Ensembl gene IDs: ENSG00000183054

Ensembl transcript IDs: ENST00000463822.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GGATGCTTCCTGCCCTTGAACATCAGACTCCTAGTTCTTCAGTTTTaGAACTTGGACTGGCTCTCATTGCTCCTCAGTCTGCAGATGGCC	+
Preference number: 5 (lower is better) Translates to: GCFLPLNIRLLVLQF*NLDWLSLLLSLQMA Trigger: GGCCATCTGCAGACTGAGGAGCAATGAGAGCCAGTCCAAGTTCCAAAACTGAAGAACTAGGAGTCTGATGTTCAAGGGCAGGAAGCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463822.1
CDS TCA 72 bp	GTGGCAGGTGCCTGTAATCCCAGCTGCTGGGGAGGCTaGGGCAGAGAATTGCTGGAAACCAGGAGGCGGAGG	+
Preference number: 6 (lower is better) Translates to: VAGACNPSCWGG*GRELLETRRRR Trigger: CCTCCGCCTCCTGGTTTCCAGCAATTCTCTGCCTCAGCCTCCCCAGCAGCTGGGATTACAGGCACCTGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463822.1
CDS GCA 72 bp	GACTGGCCTAGCCTCCCAAGCTACATCTTTCTCCTGTaGTGGATGCTTCCTGCCCTTGAACATCAGACTCCT	+
Preference number: 6 (lower is better) Translates to: DWPSLPSYIFLL*WMLPALEHQTP Trigger: AGGAGTCTGATGTTCAAGGGCAGGAAGCATCCAGCACAGGAGAAAGATGTAGCTTGGGAGGCTAGGCCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463822.1
CDS GCA 72 bp	CCCACCTCAGCCCCACAAGTAGCTGGGACTTCCAGGTaGATGCCATCCCGCCCAGATAATTTTTGTACTTTT	+
Preference number: 6 (lower is better) Translates to: PTSAPQVAGTSR*MPSRPDNFCTF Trigger: AAAAGTACAAAAATTATCTGGGCGGGATGGCATGCACCTGGAAGTCCCAGCTACTTGTGGGGCTGAGGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000463822.1
CDS CAA 90 bp	TGGATGCTTCCTGCCCTTGAACATCAGACTCCTAGTTCTTCAGTTTaGGAACTTGGACTGGCTCTCATTGCTCCTCAGTCTGCAGATGGC	+
Preference number: 6 (lower is better) Translates to: WMLPALEHQTPSSSV*ELGLALIAPQSADG Trigger: GCCATCTGCAGACTGAGGAGCAATGAGAGCCAGTCCAAGTTCCAAAACTGAAGAACTAGGAGTCTGATGTTCAAGGGCAGGAAGCATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463822.1
CDS TCA 72 bp	ACTGCTTTGGCTCCCAAAGTGCTCAGATTGCAGGGGTaGGACACCACGCCTGGTCTAAACTGTAAAGTTTAC	+
Preference number: 6 (lower is better) Translates to: TALAPKVLRLQG*DTTPGLNCKVY Trigger: GTAAACTTTACAGTTTAGACCAGGCGTGGTGTCTCACCCCTGCAATCTGAGCACTTTGGGAGCCAAAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463822.1
CDS GCA 72 bp	GTTAATACTGGGTGTCAACCTGATTGGATTAAAGGATaGAAAGTATTAATCCGAGTGTTGTCTGTGAGGGTG	+
Preference number: 6 (lower is better) Translates to: VNTGCQPDWIKG*KVLIRVLSVRV Trigger: CACCCTCACAGACAACACTCGGATTAATACTTTGCATCCTTTAATCCAATCAGGTTGACACCCAGTATTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463822.1
CDS CAA 90 bp	TGTCAACCTGATTGGATTAAAGGATGCAAAGTATTAATCCGAGTGTaGTCTGTGAGGGTGTTGCCAAAGGGATTAACATTTGAGTCAGTG	+
Preference number: 6 (lower is better) Translates to: CQPDWIKGCKVLIRV*SVRVLPKGLTFESV Trigger: CACTGACTCAAATGTTAATCCCTTTGGCAACACCCTCACAGACAACACTCGGATTAATACTTTGCATCCTTTAATCCAATCAGGTTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463822.1

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