Pregenerated sensors for RGPD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000015568

Ensembl transcript IDs: ENST00000393283.5, ENST00000477523.1

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	TCTGTGGGTGATGGTCTCTCAGTTCAGCTGTCAATCTTTGGTGTGTaGAACAGGACGAGATCTATGCAGGAGCAGCTCAAGAATGAGCCC	+
Preference number: 6 (lower is better) Translates to: SVGDGLSVQLSIFGV*NRTRSMQEQLKNEP Trigger: GGGCTCATTCTTGAGCTGCTCCTGCATAGATCTCGTCCTGTTCAACACACCAAAGATTGACAGCTGAACTGAGAGACCATCACCCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393283.5
CDS CAA 90 bp	AGGACTATTCAGTTCTGTCTGACTTGTGCACCACCCAGTGGCCAGTaGTGTCTGTGGGTGATGGTCTCTCAGTTCAGCTGTCAATCTTTG	+
Preference number: 6 (lower is better) Translates to: RTIQFCLTCAPPSGQ*CLWVMVSQFSCQSL Trigger: CAAAGATTGACAGCTGAACTGAGAGACCATCACCCACAGACACAACTGGCCACTGGGTGGTGCACAAGTCAGACAGAACTGAATAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393283.5
CDS GCA 72 bp	ATTAGGTTCAAGCCACAAGTTCCCACCCCTCCATTCTaGAGTCTGGTTCCAAAGTCAGTTCAGTGTCCAGAG	+
Preference number: 6 (lower is better) Translates to: IRFKPQVPTPPF*SLVPKSVQCPE Trigger: CTCTGGACACTGAACTGACTTTGGAACCAGACTGCAGAATGGAGGGGTGGGAACTTGTGGCTTGAACCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393283.5
CDS CCA 72 bp	CTGCCCTTGAACATCAGACTCCTAGTTCTTCAGTTTTaGAACTTGGACTGGCTCTCATTGCTCCTCAGTCTG	+
Preference number: 6 (lower is better) Translates to: LPLNIRLLVLQF*NLDWLSLLLSL Trigger: CAGACTGAGGAGCAATGAGAGCCAGTCCAAGTTCCAAAACTGAAGAACTAGGAGTCTGATGTTCAAGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477523.1
CDS CAA 72 bp	GATGGTCTCTCAGTTCAGCTGTCAATCTTTGGTGTGTaGAACAGGACGAGATCTATGCAGGAGCAGCTCAAG	+
Preference number: 6 (lower is better) Translates to: DGLSVQLSIFGV*NRTRSMQEQLK Trigger: CTTGAGCTGCTCCTGCATAGATCTCGTCCTGTTCAACACACCAAAGATTGACAGCTGAACTGAGAGACCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393283.5
CDS CAA 72 bp	CCTGCCCTTGAACATCAGACTCCTAGTTCTTCAGTTTaGGAACTTGGACTGGCTCTCATTGCTCCTCAGTCT	+
Preference number: 6 (lower is better) Translates to: PALEHQTPSSSV*ELGLALIAPQS Trigger: AGACTGAGGAGCAATGAGAGCCAGTCCAAGTTCCAAAACTGAAGAACTAGGAGTCTGATGTTCAAGGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477523.1
CDS TCA 72 bp	ATGGTCTCTCAGTTCAGCTGTCAATCTTTGGTGTGTTaGACAGGACGAGATCTATGCAGGAGCAGCTCAAGA	+
Preference number: 6 (lower is better) Translates to: MVSQFSCQSLVC*TGRDLCRSSSR Trigger: TCTTGAGCTGCTCCTGCATAGATCTCGTCCTGTTCAACACACCAAAGATTGACAGCTGAACTGAGAGACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393283.5
CDS CCA 72 bp	GAATCTATGAACACAGGAACAGAAATCAGGAGATCTTaGCTCTCGCCCTTTCAGTGCCACAAAGCTGTTTTG	+
Preference number: 6 (lower is better) Translates to: ESMNTGTEIRRS*LSPFQCHKAVL Trigger: CAAAACAGCTTTGTGGCACTGAAAGGGCGAGAGCCAAGATCTCCTGATTTCTGTTCCTGTGTTCATAGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393283.5
CDS CAA 72 bp	TGCAAAGTATTAATCCGAGTGTTGTCTGTGAGGGTGTaGCCAAAGGGATTAACATTTGAGTCAGTGGGCTGG	+
Preference number: 6 (lower is better) Translates to: CKVLIRVLSVRV*PKGLTFESVGW Trigger: CCAGCCCACTGACTCAAATGTTAATCCCTTTGGCAACACCCTCACAGACAACACTCGGATTAATACTTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477523.1
CDS CAA 72 bp	AGAATCTATGAACACAGGAACAGAAATCAGGAGATCTaGGCTCTCGCCCTTTCAGTGCCACAAAGCTGTTTT	+
Preference number: 6 (lower is better) Translates to: RIYEHRNRNQEI*ALALSVPQSCF Trigger: AAAACAGCTTTGTGGCACTGAAAGGGCGAGAGCCAAGATCTCCTGATTTCTGTTCCTGTGTTCATAGATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393283.5

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