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Pregenerated sensors for RGPD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000185304

Ensembl transcript IDs: ENST00000398146.4

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTAACTGGTGAGTTGGTTGAGTGGAAGCTGGTTGAGAACTTTTACTaGAAACCATTTACAGTAGACCACAATTTTATAGTCCTGTTTGGC +
Preference number: 1 (lower is better)
Translates to: LTGELVEWKLVENFY*KPFTVDHNFIVLFG
Trigger: GCCAAACAGGACTATAAAATTGTGGTCTACTGTAAATGGTTTGCAGTAAAAGTTCTCAACCAGCTTCCACTCAACCAACTCACCAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398146.4
3UTR-3UTR TCA 90 bp CCAGCTGCATGTGGACCCAGGTGGGCACCGGACTGTTTTAAACACAGGAGAGGGGTCCGTCTGTGTCTGTaGGGGATTGGTTCCAGGACC +
Preference number: 2 (lower is better)
Translates to: PAACGPRWAPDCFKHRRGVRLCL*GIGSRT
Trigger: GGTCCTGGAACCAATCCCTCACAGACACAGACGGAC...CCCTCTCCTGTGTTTAAAACAGTCCGGTGCCCACCTGGGTCCACATGCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398146.4
3UTR-3UTR GCA 90 bp CACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCAGCCTCGGAAAAGGCCAAGCCTCTGGCTaGACTGTGCCCCGTGTGTCC +
Preference number: 2 (lower is better)
Translates to: HWEPEEIEVGWISFSLGKGQASG*TVPRVS
Trigger: GGACACACGGGGCACAGTGCAGCCAGAGGCTTGGCC...TTTTCCGAGGCTGAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398146.4
3UTR-3UTR GCA 90 bp CACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCAGCCTCGGAAAACCTCTGGCTGCACTGTaGCCCGTGTGTCCCCAGCAT +
Preference number: 2 (lower is better)
Translates to: HWEPEEIEVGWISFSLGKPLAAL*PVCPQH
Trigger: ATGCTGGGGACACACGGGGCACAGTGCAGCCAGAGG...TTTTCCGAGGCTGAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398146.4
3UTR-3UTR GCA 90 bp CACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCAGCCTCGGAAAAGGCTACCAAAATCCATaGTTCTCAAGTCCCTTATGT +
Preference number: 2 (lower is better)
Translates to: HWEPEEIEVGWISFSLGKGYQNP*FSSPLC
Trigger: ACATAAGGGACTTGAGAAGCATGGATTTTGGTAGCC...TTTTCCGAGGCTGAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398146.4
3UTR CAA 72 bp ATCTACTGTAAAGTGTCCGTCTGTGTCTGTGAGGGATaGGTTCCAGGACCCCTGTGGCTACCAAAATCCATG +
Preference number: 4 (lower is better)
Translates to: IYCKVSVCVCEG*VPGPLWLPKSM
Trigger: CATGGATTTTGGTAGCCACAGGGGTCCTGGAACCAATCCCTCACAGACACAGACGGACACTTTACAGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398146.4
CDS-3UTR TCA 90 bp TTTTCATATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCAGCGTCCGTCTGTGTCTGTaGGGGATTGGTTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: FSYHWEPEEIEVGWISFSVRLCL*GIGSRT
Trigger: GGTCCTGGAACCAATCCCTCACAGACACAGACGGAC...GCTGAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398146.4
CDS-3UTR TCA 90 bp CACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCAGCCTCGGAAAAATATCACTGGGAGCCTaGAGAAATAGAAGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: HWEPEEIEVGWISFSLGKISLGA*RNRSGL
Trigger: CAACCCACTTCTATTTCTTCAGGCTCCCAGTGATAT...TTTTCCGAGGCTGAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398146.4
CDS-3UTR TCA 90 bp TTTTCATATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCAGCCTACCATTATGTGCTTaGATAGCACCAACATCGTAT +
Preference number: 4 (lower is better)
Translates to: FSYHWEPEEIEVGWISFSLPLCA*IAPTSY
Trigger: ATACGATGTTGGTGCTATTCAAGCACATAATGGTAG...GCTGAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398146.4
CDS-3UTR TCA 90 bp TTTTCATATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCAGCATACTCAACAATTTCTaGTGCCTGAATGTCTACACT +
Preference number: 4 (lower is better)
Translates to: FSYHWEPEEIEVGWISFSILNNF*CLNVYT
Trigger: AGTGTAGACATTCAGGCATCAGAAATTGTTGAGTAT...GCTGAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398146.4
3UTR CAA 72 bp TGCTTCTCAAGTCCCTTATGTAAAATGGTGCAGTATTaGCATATAACCTACATACCTTCTCTTGTGCAATCC +
Preference number: 4 (lower is better)
Translates to: CFSSPLCKMVQY*HITYIPSLVQS
Trigger: GGATTGCACAAGAGAAGGTATGTAGGTTATATGCAAATACTGCACCATTTTACATAAGGGACTTGAGAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398146.4