Pregenerated sensors for RGPD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000187627Ensembl transcript IDs: ENST00000409776.6, ENST00000641458.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGTGTTCATCTACTGTAAAGTGTCCGTCTGTGTCTGTGAGGGATTaGTTCCAGGACCCCTGTGGCTACCAAAATCCATGCTTCTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: LCSSTVKCPSVSVRD*FQDPCGYQNPCFSS Trigger: ACTTGAGAAGCATGGATTTTGGTAGCCACAGGGGTCCTGGAACCAATCCCTCACAGACACAGACGGACACTTTACAGTAGATGAACACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR CCA 90 bp | GTAGACCACAATTTTATAGTCCTGTTTGGCACTTTTTCATATCACTaGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: VDHNFIVLFGTFSYH*EPEEIEVGWISFSL Trigger: GAGGCTGAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGAAAAAGTGCCAAACAGGACTATAAAATTGTGGTCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGAAGTGGGTTGGATCTCTTTCAGCCTCGGAAAAGCCTGCCATTCCCCCATCGTGTCTGTGAGGGATTaGTTCCAGGACCCCTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: IEVGWISFSLGKACHSPIVSVRD*FQDPCG Trigger: GCCACAGGGGTCCTGGAACCAATCCCTCACAGACAC...GATGGGGGAATGGCAGGCTTTTCCGAGGCTGAAAGAGATCCAACCCACTTCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGCTGCATGTGGACCCAGGTGGGCACCGGACTGTTTTAAACACAGGAGAGGTGAGTTGGTTGAGTaGAAGCTGGTTGAGAACTTT | + |
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Preference number: 2 (lower is better) Translates to: LPAACGPRWAPDCFKHRRGELVE*KLVENF Trigger: AAAGTTCTCAACCAGCTTCCACTCAACCAACTCACC...TCTCCTGTGTTTAAAACAGTCCGGTGCCCACCTGGGTCCACATGCAGCTGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTGGAAAATGCAAAGAAACGACTCGTTGTAAGCACATAACTCACGTGGGGGTGTCTGTGAGGGATTaGTTCCAGGACCCCTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: KVGKCKETTRCKHITHVGVSVRD*FQDPCG Trigger: GCCACAGGGGTCCTGGAACCAATCCCTCACAGACAC...CCCCACGTGAGTTATGTGCTTACAACGAGTCGTTTCTTTGCATTTTCCAACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR CAA 90 bp | TTTGTGTTCATCTACTGTAAAGTGTCCGTCTGTGTCTGTGAGGGATaGGTTCCAGGACCCCTGTGGCTACCAAAATCCATGCTTCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: FVFIYCKVSVCVCEG*VPGPLWLPKSMLLK Trigger: CTTGAGAAGCATGGATTTTGGTAGCCACAGGGGTCCTGGAACCAATCCCTCACAGACACAGACGGACACTTTACAGTAGATGAACACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGCTGCATGTGGACCCAGGTGGGCACCGGACTGTTTTAAACACAGGAGAACTTTTTCATATCACTaGGAGCCTGAAGAAATAGAA | + |
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Preference number: 2 (lower is better) Translates to: LPAACGPRWAPDCFKHRRTFSYH*EPEEIE Trigger: TTCTATTTCTTCAGGCTCCCAGTGATATGAAAAAGT...TCTCCTGTGTTTAAAACAGTCCGGTGCCCACCTGGGTCCACATGCAGCTGGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTTTCATATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCGTTCCAGGACCCCTGTaGCTACCAAAATCCATGCTT | + |
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Preference number: 2 (lower is better) Translates to: TFSYHWEPEEIEVGWISFVPGPL*LPKSML Trigger: AAGCATGGATTTTGGTAGCCACAGGGGTCCTGGAAC...GAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGAAAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR GCA 72 bp | GGGGAACAGACATGGGTGGGCACACTAGCAAACACCTaGCAGCTGCATGTGGACCCAGGTGGGCACCGGACT | + |
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Preference number: 3 (lower is better) Translates to: GEQTWVGTLANT*QLHVDPGGHRT Trigger: AGTCCGGTGCCCACCTGGGTCCACATGCAGCTGGCAGGTGTTTGCTAGTGTGCCCACCCATGTCTGTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR GCA 72 bp | CTAGAATGTGAGCTCTATGATGGCCAAGCCTCTGGCTaGACTGTGCCCCGTGTGTCCCCAGCATCCTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: LECELYDGQASG*TVPRVSPASWW Trigger: CCACCAGGATGCTGGGGACACACGGGGCACAGTGCAGCCAGAGGCTTGGCCATCATAGAGCTCACATTCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR CCA 72 bp | ACTAGCAAACACCTGCCAGCTGCATGTGGACCCAGGTaGGCACCGGACTGTTTTAAACACAGGAGAGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: TSKHLPAACGPR*APDCFKHRRGP Trigger: GGGCCCTCTCCTGTGTTTAAAACAGTCCGGTGCCCACCTGGGTCCACATGCAGCTGGCAGGTGTTTGCTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR-3UTR CAA 90 bp | TATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCAGCCTCGGATGTGTCTGTGAGGGATaGGTTCCAGGACCCCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: YHWEPEEIEVGWISFSLGCVCEG*VPGPLW Trigger: CCACAGGGGTCCTGGAACCAATCCCTCACAGACACA...TCCGAGGCTGAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR CCA 72 bp | GTCTGTGTCTGTGAGGGATTGGTTCCAGGACCCCTGTaGCTACCAAAATCCATGCTTCTCAAGTCCCTTATG | + |
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Preference number: 3 (lower is better) Translates to: VCVCEGLVPGPL*LPKSMLLKSLM Trigger: CATAAGGGACTTGAGAAGCATGGATTTTGGTAGCCACAGGGGTCCTGGAACCAATCCCTCACAGACACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR CCA 72 bp | TCATATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTaGATCTCTTTCAGCCTCGGAAAAGCCTGCCATTCC | + |
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Preference number: 3 (lower is better) Translates to: SYHWEPEEIEVG*ISFSLGKACHS Trigger: GGAATGGCAGGCTTTTCCGAGGCTGAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| 3UTR CCA 72 bp | AATTTTATAGTCCTGTTTGGCACTTTTTCATATCACTaGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCT | + |
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Preference number: 3 (lower is better) Translates to: NFIVLFGTFSYH*EPEEIEVGWIS Trigger: AGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGAAAAAGTGCCAAACAGGACTATAAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR GCA 90 bp | CTGCCAGCTGCATGTGGACCCAGGTGGGCACCGGACTGTTTTAAACACAGGAGACCTCTGGCTGCACTGTaGCCCGTGTGTCCCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LPAACGPRWAPDCFKHRRPLAAL*PVCPQH Trigger: ATGCTGGGGACACACGGGGCACAGTGCAGCCAGAGG...TCTCCTGTGTTTAAAACAGTCCGGTGCCCACCTGGGTCCACATGCAGCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR GCA 90 bp | ATAGAAGTGGGTTGGATCTCTTTCAGCCTCGGAAAAGCCTGCCATTCCCCCATCCAAACACCTGCCAGCTaGATGTGGACCCAGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: IEVGWISFSLGKACHSPIQTPAS*MWTQVG Trigger: GCCCACCTGGGTCCACATGCAGCTGGCAGGTGTTTG...GATGGGGGAATGGCAGGCTTTTCCGAGGCTGAAAGAGATCCAACCCACTTCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CCA 90 bp | CTGCCAGCTGCATGTGGACCCAGGTGGGCACCGGACTGTTTTAAACACAGGAGAGTTCCAGGACCCCTGTaGCTACCAAAATCCATGCTT | + |
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Preference number: 4 (lower is better) Translates to: LPAACGPRWAPDCFKHRRVPGPL*LPKSML Trigger: AAGCATGGATTTTGGTAGCCACAGGGGTCCTGGAAC...TCTCCTGTGTTTAAAACAGTCCGGTGCCCACCTGGGTCCACATGCAGCTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CCA 90 bp | TGTTCATCTACTGTAAAGTGTCCGTCTGTGTCTGTGAGGGATTGGTTCCAGGACGTGTCTGTGAGGGATTaGTTCCAGGACCCCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: CSSTVKCPSVSVRDWFQDVSVRD*FQDPCG Trigger: GCCACAGGGGTCCTGGAACCAATCCCTCACAGACAC...GTCCTGGAACCAATCCCTCACAGACACAGACGGACACTTTACAGTAGATGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR GCA 90 bp | ACTTTTTCATATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCGGCCAAGCCTCTGGCTaGACTGTGCCCCGTGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: TFSYHWEPEEIEVGWISFGQASG*TVPRVS Trigger: GGACACACGGGGCACAGTGCAGCCAGAGGCTTGGCC...GAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGAAAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR GCA 90 bp | TGTTCATCTACTGTAAAGTGTCCGTCTGTGTCTGTGAGGGATTGGTTCCAGGACACACTAGCAAACACCTaGCAGCTGCATGTGGACCCA | + |
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Preference number: 4 (lower is better) Translates to: CSSTVKCPSVSVRDWFQDTLANT*QLHVDP Trigger: TGGGTCCACATGCAGCTGGCAGGTGTTTGCTAGTGT...GTCCTGGAACCAATCCCTCACAGACACAGACGGACACTTTACAGTAGATGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR GCA 90 bp | TATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCAGCCTCGGAACACTAGCAAACACCTaGCAGCTGCATGTGGACCCA | + |
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Preference number: 4 (lower is better) Translates to: YHWEPEEIEVGWISFSLGTLANT*QLHVDP Trigger: TGGGTCCACATGCAGCTGGCAGGTGTTTGCTAGTGT...TCCGAGGCTGAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR GCA 90 bp | ACCAAAATCCATGCTTCTCAAGTCCCTTATGTAAAATGGTGCAGTATTTGCATAGGCCAAGCCTCTGGCTaGACTGTGCCCCGTGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: TKIHASQVPYVKWCSICIGQASG*TVPRVS Trigger: GGACACACGGGGCACAGTGCAGCCAGAGGCTTGGCC...TATGCAAATACTGCACCATTTTACATAAGGGACTTGAGAAGCATGGATTTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR GCA 90 bp | ACTTTTTCATATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCCAAACACCTGCCAGCTaGATGTGGACCCAGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: TFSYHWEPEEIEVGWISFQTPAS*MWTQVG Trigger: GCCCACCTGGGTCCACATGCAGCTGGCAGGTGTTTG...GAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGAAAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR GCA 90 bp | ATAGAAGTGGGTTGGATCTCTTTCAGCCTCGGAAAAGCCTGCCATTCCCCCATCGGCTACCAAAATCCATaGTTCTCAAGTCCCTTATGT | + |
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Preference number: 4 (lower is better) Translates to: IEVGWISFSLGKACHSPIGYQNP*FSSPLC Trigger: ACATAAGGGACTTGAGAAGCATGGATTTTGGTAGCC...GATGGGGGAATGGCAGGCTTTTCCGAGGCTGAAAGAGATCCAACCCACTTCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CCA 90 bp | TGTTCATCTACTGTAAAGTGTCCGTCTGTGTCTGTGAGGGATTGGTTCCAGGACGGTGAGTTGGTTGAGTaGAAGCTGGTTGAGAACTTT | + |
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Preference number: 4 (lower is better) Translates to: CSSTVKCPSVSVRDWFQDGELVE*KLVENF Trigger: AAAGTTCTCAACCAGCTTCCACTCAACCAACTCACC...GTCCTGGAACCAATCCCTCACAGACACAGACGGACACTTTACAGTAGATGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR GCA 90 bp | TGTTCATCTACTGTAAAGTGTCCGTCTGTGTCTGTGAGGGATTGGTTCCAGGACCCTGTGAAAAATCAGTaGAAGATTCCAATAAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: CSSTVKCPSVSVRDWFQDPVKNQ*KIPIRN Trigger: GTTTCTTATTGGAATCTTGCACTGATTTTTCACAGG...GTCCTGGAACCAATCCCTCACAGACACAGACGGACACTTTACAGTAGATGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTGGAAAATGCAAAGAAACGACTCGTTGTAAGCACATAACTCACGTGGGGGGCTACCAAAATCCATaGTTCTCAAGTCCCTTATGT | + |
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Preference number: 4 (lower is better) Translates to: KVGKCKETTRCKHITHVGGYQNP*FSSPLC Trigger: ACATAAGGGACTTGAGAAGCATGGATTTTGGTAGCC...CCCCACGTGAGTTATGTGCTTACAACGAGTCGTTTCTTTGCATTTTCCAACTTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CCA 90 bp | TATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCAGCCTCGGATTTAATCTTTGGTCTTaGAACCTGAAATGCTATGAC | + |
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Preference number: 4 (lower is better) Translates to: YHWEPEEIEVGWISFSLGFNLWS*NLKCYD Trigger: GTCATAGCATTTCAGGTTCCAAGACCAAAGATTAAA...TCCGAGGCTGAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CCA 90 bp | AGTCCCTTATGTAAAATGGTGCAGTATTTGCATATAACCTACATACCTTCTCTTGTTCCAGGACCCCTGTaGCTACCAAAATCCATGCTT | + |
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Preference number: 4 (lower is better) Translates to: SPLCKMVQYLHITYIPSLVPGPL*LPKSML Trigger: AAGCATGGATTTTGGTAGCCACAGGGGTCCTGGAAC...AAGAGAAGGTATGTAGGTTATATGCAAATACTGCACCATTTTACATAAGGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTGGAAAATGCAAAGAAACGACTCGTTGTAAGCACATAACTCACGTGGGGACTTTTTCATATCACTaGGAGCCTGAAGAAATAGAA | + |
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Preference number: 4 (lower is better) Translates to: KVGKCKETTRCKHITHVGTFSYH*EPEEIE Trigger: TTCTATTTCTTCAGGCTCCCAGTGATATGAAAAAGT...CCCCACGTGAGTTATGTGCTTACAACGAGTCGTTTCTTTGCATTTTCCAACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CCA 90 bp | AGTCCCTTATGTAAAATGGTGCAGTATTTGCATATAACCTACATACCTTCTCTTGGTGAGTTGGTTGAGTaGAAGCTGGTTGAGAACTTT | + |
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Preference number: 4 (lower is better) Translates to: SPLCKMVQYLHITYIPSLGELVE*KLVENF Trigger: AAAGTTCTCAACCAGCTTCCACTCAACCAACTCACC...AAGAGAAGGTATGTAGGTTATATGCAAATACTGCACCATTTTACATAAGGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR GCA 90 bp | ACTTTTTCATATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCAAGAAAGTTGGAAAATaGAAAGAAACGACTCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: TFSYHWEPEEIEVGWISFKKVGK*KETTRC Trigger: ACAACGAGTCGTTTCTTTGCATTTTCCAACTTTCTT...GAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGAAAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CCA 90 bp | ACTTTTTCATATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCTTTAATCTTTGGTCTTaGAACCTGAAATGCTATGAC | + |
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Preference number: 4 (lower is better) Translates to: TFSYHWEPEEIEVGWISFFNLWS*NLKCYD Trigger: GTCATAGCATTTCAGGTTCCAAGACCAAAGATTAAA...GAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGAAAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CCA 90 bp | ACTTTTTCATATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCACTTTTTCATATCACTaGGAGCCTGAAGAAATAGAA | + |
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Preference number: 4 (lower is better) Translates to: TFSYHWEPEEIEVGWISFTFSYH*EPEEIE Trigger: TTCTATTTCTTCAGGCTCCCAGTGATATGAAAAAGT...GAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGAAAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR GCA 90 bp | AGTCCCTTATGTAAAATGGTGCAGTATTTGCATATAACCTACATACCTTCTCTTCCTGTGAAAAATCAGTaGAAGATTCCAATAAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SPLCKMVQYLHITYIPSLPVKNQ*KIPIRN Trigger: GTTTCTTATTGGAATCTTGCACTGATTTTTCACAGG...AAGAGAAGGTATGTAGGTTATATGCAAATACTGCACCATTTTACATAAGGGACT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR GCA 90 bp | AGTCCCTTATGTAAAATGGTGCAGTATTTGCATATAACCTACATACCTTCTCTTAAGAAAGTTGGAAAATaGAAAGAAACGACTCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: SPLCKMVQYLHITYIPSLKKVGK*KETTRC Trigger: ACAACGAGTCGTTTCTTTGCATTTTCCAACTTTCTT...AAGAGAAGGTATGTAGGTTATATGCAAATACTGCACCATTTTACATAAGGGACT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CAA 90 bp | AGGGATTGGTTCCAGGACCCCTGTGGCTACCAAAATCCATGCTTCTCAAGTCCCTGTGTCTGTGAGGGATaGGTTCCAGGACCCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: RDWFQDPCGYQNPCFSSPCVCEG*VPGPLW Trigger: CCACAGGGGTCCTGGAACCAATCCCTCACAGACACA...GGGACTTGAGAAGCATGGATTTTGGTAGCCACAGGGGTCCTGGAACCAATCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CAA 90 bp | AGGGATTGGTTCCAGGACCCCTGTGGCTACCAAAATCCATGCTTCTCAAGTCCCAGAAATAGAAGTGGGTaGGATCTCTTTCAGCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: RDWFQDPCGYQNPCFSSPRNRSG*DLFQPR Trigger: CCGAGGCTGAAAGAGATCCAACCCACTTCTATTTCT...GGGACTTGAGAAGCATGGATTTTGGTAGCCACAGGGGTCCTGGAACCAATCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CAA 90 bp | GTGTCCCCAGCATCCTGGTGGGGCTCAATACACAGAGAGCTCATAAGTAGCATTAGAAATAGAAGTGGGTaGGATCTCTTTCAGCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: VSPASWWGSIHRELISSIRNRSG*DLFQPR Trigger: CCGAGGCTGAAAGAGATCCAACCCACTTCTATTTCT...AATGCTACTTATGAGCTCTCTGTGTATTGAGCCCCACCAGGATGCTGGGGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CAA 90 bp | ACTTTTTCATATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCTGTGTCTGTGAGGGATaGGTTCCAGGACCCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: TFSYHWEPEEIEVGWISFCVCEG*VPGPLW Trigger: CCACAGGGGTCCTGGAACCAATCCCTCACAGACACA...GAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGAAAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CAA 90 bp | TATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCAGCCTCGGAGGCACAGGCAATTTCTaGACCACTGAAAGATTTGAA | + |
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Preference number: 5 (lower is better) Translates to: YHWEPEEIEVGWISFSLGGTGNF*TTERFE Trigger: TTCAAATCTTTCAGTGGTCAAGAAATTGCCTGTGCC...TCCGAGGCTGAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CAA 90 bp | ACTTTTTCATATCACTGGGAGCCTGAAGAAATAGAAGTGGGTTGGATCTCTTTCGGCACAGGCAATTTCTaGACCACTGAAAGATTTGAA | + |
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Preference number: 5 (lower is better) Translates to: TFSYHWEPEEIEVGWISFGTGNF*TTERFE Trigger: TTCAAATCTTTCAGTGGTCAAGAAATTGCCTGTGCC...GAAAGAGATCCAACCCACTTCTATTTCTTCAGGCTCCCAGTGATATGAAAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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| CDS-3UTR CAA 90 bp | ACCAAAATCCATGCTTCTCAAGTCCCTTATGTAAAATGGTGCAGTATTTGCATAGGTTTCTTGAAGACCTaGAGCAACCGCAGCAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: TKIHASQVPYVKWCSICIGFLKT*SNRSKF Trigger: AAACTTGCTGCGGTTGCTCAAGGTCTTCAAGAAACC...TATGCAAATACTGCACCATTTTACATAAGGGACTTGAGAAGCATGGATTTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409776.6 ENST00000641458.2 |
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