RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RGMA (Homo sapiens)

Ensembl gene IDs: ENSG00000182175

Ensembl transcript IDs: ENST00000329082.11, ENST00000425933.6, ENST00000542321.6, ENST00000543599.5, ENST00000554387.5, ENST00000555584.1, ENST00000555598.1, ENST00000556658.1, ENST00000556950.1, ENST00000557301.2, ENST00000557420.1, ENST00000650169.1

Found 1410 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTATGCCATGGACGGCCGAGTGGTAGGCCAGGTCACCCCGGCAGGTaGGGGCCGTCCGCCGCGTGCACAGGGCGTAGCTGCGCAAGGCTG +
Preference number: 1 (lower is better)
Translates to: LCHGRPSGRPGHPGR*GPSAACTGRSCARL
Trigger: CAGCCTTGCGCAGCTACGCCCTGTGCACGCGGCGGACGGCCCGCACCTGCCGGGGTGACCTGGCCTACCACTCGGCCGTCCATGGCATAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR GCA 90 bp CGGGGCTGTCCGAGCGCTCCTGGCTGTCTCCGGCCGGTGGGAGCGTaGGCAGGCGTGGCTGCGAGGTGGGGCCATCCTTGGAGCAGTTGT +
Preference number: 1 (lower is better)
Translates to: RGCPSAPGCLRPVGA*AGVAARWGHPWSSC
Trigger: ACAACTGCTCCAAGGATGGCCCCACCTCGCAGCCACGCCTGCGCACGCTCCCACCGGCCGGAGACAGCCAGGAGCGCTCGGACAGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR CCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTaGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCAC +
Preference number: 1 (lower is better)
Translates to: EPLAAGGPWRSAGPW*TRQEICTPWAVPAH
Trigger: GTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
3UTR CCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATaGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCC +
Preference number: 1 (lower is better)
Translates to: PEPLAAGGPWRSAGP*WTRQEICTPWAVPA
Trigger: GGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
3UTR CCA 90 bp GCAGATCTCGGGGCTGTCCGAGCGCTCCTGGCTGTCTCCGGCCGGTaGGAGCGTGCGCAGGCGTGGCTGCGAGGTGGGGCCATCCTTGGA +
Preference number: 1 (lower is better)
Translates to: ADLGAVRALLAVSGR*ERAQAWLRGGAILG
Trigger: TCCAAGGATGGCCCCACCTCGCAGCCACGCCTGCGCACGCTCCCACCGGCCGGAGACAGCCAGGAGCGCTCGGACAGCCCCGAGATCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR GCA 90 bp CTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCAGGGCTGGCGGCTaGCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGC +
Preference number: 1 (lower is better)
Translates to: LVWEGLGGCGCRAGG*QPAGTGALSIGVEG
Trigger: GCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGCCAGCCCTGCACCCACAGCCCCCGAGACCTTCCCATACGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR CCA 90 bp CGAGCGCTCCTGGCTGTCTCCGGCCGGTGGGAGCGTGCGCAGGCGTaGCTGCGAGGTGGGGCCATCCTTGGAGCAGTTGTGCTGGCTCAT +
Preference number: 1 (lower is better)
Translates to: RALLAVSGRWERAQA*LRGGAILGAVVLAH
Trigger: ATGAGCCAGCACAACTGCTCCAAGGATGGCCCCACCTCGCAGCCACGCCTGCGCACGCTCCCACCGGCCGGAGACAGCCAGGAGCGCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR CCA 90 bp CTGGCGGCTGCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTaGAAGGCCTGGAAGTCGATCTGCTGGTTGAGGGGGCAGCCCCGC +
Preference number: 1 (lower is better)
Translates to: LAAASLRAPVPSALV*KAWKSICWLRGQPR
Trigger: GCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR CCA 90 bp CGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCAGGGCTaGCGGCTGCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGT +
Preference number: 1 (lower is better)
Translates to: RLSRMGRSRGLWVQG*RLPACGHRCPQHWC
Trigger: ACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGCCAGCCCTGCACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR CCA 90 bp GCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGCCTaGAAGTCGATCTGCTGGTTGAGGGGGCAGCCCCGCAGGCAGAGG +
Preference number: 1 (lower is better)
Translates to: ASLRAPVPSALVWKA*KSICWLRGQPRRQR
Trigger: CCTCTGCCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR TCA 90 bp CAGGGCGTAGCTGCGCAAGGCTGCACAGAACTCGGGGGTGTCGTCTaGGGCTGGGGCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGA +
Preference number: 1 (lower is better)
Translates to: QGVAAQGCTELGGVV*GWGVAARRGAPELR
Trigger: TCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGCCCCAGCCTCAGACGACACCCCCGAGTTCTGTGCAGCCTTGCGCAGCTACGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR CCA 90 bp AGCAGCCTCCTGCAGCACCACTGCTCCGCCCGGGCTATGAGAAGATaGGCACTGGCAGGGAGGGTGGCAGGCAGTCCCAACAGCTGGGGC +
Preference number: 1 (lower is better)
Translates to: SSLLQHHCSARAMRR*ALAGRVAGSPNSWG
Trigger: GCCCCAGCTGTTGGGACTGCCTGCCACCCTCCCTGCCAGTGCCCATCTTCTCATAGCCCGGGCGGAGCAGTGGTGCTGCAGGAGGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp CTCCACCGGCAGCTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATaGGAAGGTCTCGGGGGCTGTGGGTGCAGGGCTGGCGGCTGCCAG +
Preference number: 1 (lower is better)
Translates to: LHRQLLLALGHGCLV*EGLGGCGCRAGGCQ
Trigger: CTGGCAGCCGCCAGCCCTGCACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR GCA 90 bp AGGGCCACTCAGCGGCCCTGCTCATCAAACCGCTCTGATGGAGCCTaGCTGCCCTTTGAGCCCCTCCTCAGTCAGCCTCCCAGTGGGGGC +
Preference number: 1 (lower is better)
Translates to: RATQRPCSSNRSDGA*LPFEPLLSQPPSGG
Trigger: GCCCCCACTGGGAGGCTGACTGAGGAGGGGCTCAAAGGGCAGGCAGGCTCCATCAGAGCGGTTTGATGAGCAGGGCCGCTGAGTGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp CCTCTCCCCAGACTCCAGACGTGGATGGACCGGGCTGGGGGCTCTTaGGGTTGTGAGGAGGAAGCAGAGGATCAGGGCAGGCCAGCTGGC +
Preference number: 1 (lower is better)
Translates to: PLPRLQTWMDRAGGS*GCEEEAEDQGRPAG
Trigger: GCCAGCTGGCCTGCCCTGATCCTCTGCTTCCTCCTCACAACCCCAAGAGCCCCCAGCCCGGTCCATCCACGTCTGGAGTCTGGGGAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR TCA 90 bp CCCCAGCTCGTTCTCTGCCCTCAAGCGAGGAGTAGGTGGGCGCAGTaGGCGGTGGGGTGGACGCGTGCTCTCCTACCAGACCCTGCTTGT +
Preference number: 1 (lower is better)
Translates to: PQLVLCPQARSRWAQ*AVGWTRALLPDPAC
Trigger: ACAAGCAGGGTCTGGTAGGAGAGCACGCGTCCACCCCACCGCTCACTGCGCCCACCTACTCCTCGCTTGAGGGCAGAGAACGAGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp ACCTGGTCCCACAGTGACGTGGACAGCAGCCTCCTGCAGCACCACTaGTCCGCCCGGGCTATGAGAAGATGGGCACTGGCAGGGAGGGTG +
Preference number: 1 (lower is better)
Translates to: TWSHSDVDSSLLQHH*SARAMRRWALAGRV
Trigger: CACCCTCCCTGCCAGTGCCCATCTTCTCATAGCCCGGGCGGAGCAGTGGTGCTGCAGGAGGCTGCTGTCCACGTCACTGTGGGACCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp TCCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTaGAGGGAGGGGGAGACACACGTTCTGCAGCCTCCTGGCCAGTGT +
Preference number: 1 (lower is better)
Translates to: SHPPTHGSGRGSRTS*REGETHVLQPPGQC
Trigger: ACACTGGCCAGGAGGCTGCAGAACGTGTGTCTCCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR CCA 90 bp CGTGTGCTAATGCATTTACCTCCAGGCCGCAGGCCTCCGCGGAGCTaGCAGCCAGGAACCTCCAGAGGCTCCCAACCTAGCCCGTCCTGC +
Preference number: 1 (lower is better)
Translates to: RVLMHLPPGRRPPRS*QPGTSRGSQPSPSC
Trigger: GCAGGACGGGCTAGGTTGGGAGCCTCTGGAGGTTCCTGGCTGCCAGCTCCGCGGAGGCCTGCGGCCTGGAGGTAAATGCATTAGCACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp CGCAAGGCTGCACAGAACTCGGGGGTGTCGTCTGAGGCTGGGGCGTaGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTTGAGG +
Preference number: 1 (lower is better)
Translates to: RKAAQNSGVSSEAGA*LPDVALQNSELHLR
Trigger: CCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGCCCCAGCCTCAGACGACACCCCCGAGTTCTGTGCAGCCTTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR TCA 90 bp AGGTGGGACTGTTCTGGGCCCCTGGATGAGCACCCTGGGCTGAAATaGGGCGGGAGCCAGCGGCAAGTCTCTCCTGGCTGTGTGGCCACA +
Preference number: 1 (lower is better)
Translates to: RWDCSGPLDEHPGLK*GGSQRQVSPGCVAT
Trigger: TGTGGCCACACAGCCAGGAGAGACTTGCCGCTGGCTCCCGCCTCATTTCAGCCCAGGGTGCTCATCCAGGGGCCCAGAACAGTCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR TCA 90 bp AGCACAGGTGGGACTGTTCTGGGCCCCTGGATGAGCACCCTGGGCTaGAATGAGGCGGGAGCCAGCGGCAAGTCTCTCCTGGCTGTGTGG +
Preference number: 1 (lower is better)
Translates to: STGGTVLGPWMSTLG*NEAGASGKSLLAVW
Trigger: CCACACAGCCAGGAGAGACTTGCCGCTGGCTCCCGCCTCATTTCAGCCCAGGGTGCTCATCCAGGGGCCCAGAACAGTCCCACCTGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR GCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTaGGAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCT +
Preference number: 1 (lower is better)
Translates to: PHGSASSSRPGLSVH*EGEGADSDGSQCVS
Trigger: AGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR CCA 90 bp CAGAGACGGGCAGCTGAGCAGGTGCCTGAAAACCGGGACCTGCACTaGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGG +
Preference number: 1 (lower is better)
Translates to: QRRAAEQVPENRDLH*YPQQPGEHGQGGHR
Trigger: CCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGTCCCGGTTTTCAGGCACCTGCTCAGCTGCCCGTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR CCA 90 bp CAGCCAGTAGGTGACAGAGCTGGGAGCCTGGATCGGGTCTGGTTCTaGAGCCCGGGCCCTTCCTTCGGTCTGGGTGTGTCTGTGCCCATG +
Preference number: 1 (lower is better)
Translates to: QPVGDRAGSLDRVWF*SPGPSFGLGVSVPM
Trigger: CATGGGCACAGACACACCCAGACCGAAGGAAGGGCCCGGGCTCCAGAACCAGACCCGATCCAGGCTCCCAGCTCTGTCACCTACTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp TGCACGTGGACCAGAGCCCACTCCATGGCTGGGCGAGCTGGGCAGTaGGTGACTGGCAGGAAATGGTCAGCTTGGAGGAACGGTGCCCTC +
Preference number: 1 (lower is better)
Translates to: CTWTRAHSMAGRAGQ*VTGRKWSAWRNGAL
Trigger: GAGGGCACCGTTCCTCCAAGCTGACCATTTCCTGCCAGTCACCCACTGCCCAGCTCGCCCAGCCATGGAGTGGGCTCTGGTCCACGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp GGGCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTTaGGGATCTTGCACGGGGAGGTGGGTAGGTTGGGGGCATAACAGC +
Preference number: 1 (lower is better)
Translates to: GRGCPTWRSRTQSCT*GSCTGRWVGWGHNS
Trigger: GCTGTTATGCCCCCAACCTACCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR GCA 90 bp TCTGGAGCCCGGGCCCTTCCTTCGGTCTGGGTGTGTCTGTGCCCATaGCACTGTCCATCCCTGGCCATCCAGGCCCGTGAAACACAAGGT +
Preference number: 1 (lower is better)
Translates to: SGARALPSVWVCLCP*HCPSLAIQARETQG
Trigger: ACCTTGTGTTTCACGGGCCTGGATGGCCAGGGATGGACAGTGGCATGGGCACAGACACACCCAGACCGAAGGAAGGGCCCGGGCTCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp AGTCCTCCCGGAGCCGGAGAGCCCTGCAGTACTTTGGCTGCTCTGTaGCCTCACCTGGGACCCCTGGTCTGTCCACTTGCTACTGTCCAG +
Preference number: 1 (lower is better)
Translates to: SPPGAGEPCSTLAAL*PHLGPLVCPLATVQ
Trigger: CTGGACAGTAGCAAGTGGACAGACCAGGGGTCCCAGGTGAGGCCACAGAGCAGCCAAAGTACTGCAGGGCTCTCCGGCTCCGGGAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp AAACACAAGGTCCCTCCCCCTAGGCCAGGGCGTGGCGGGGTAGGGTaGGGCTGGTCCAGTGGACAGAGCTCTTGCATCGTTTCCTTGACG +
Preference number: 1 (lower is better)
Translates to: KHKVPPPRPGRGGVG*GWSSGQSSCIVSLT
Trigger: CGTCAAGGAAACGATGCAAGAGCTCTGTCCACTGGACCAGCCCCACCCTACCCCGCCACGCCCTGGCCTAGGGGGAGGGACCTTGTGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp GCTGGGCGAGCTGGGCAGTGGGTGACTGGCAGGAAATGGTCAGCTTaGAGGAACGGTGCCCTCGAGGTGGTCAGTAACGGGAGGGCTGAA +
Preference number: 1 (lower is better)
Translates to: AGRAGQWVTGRKWSA*RNGALEVVSNGRAE
Trigger: TTCAGCCCTCCCGTTACTGACCACCTCGAGGGCACCGTTCCTCCAAGCTGACCATTTCCTGCCAGTCACCCACTGCCCAGCTCGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp CACTCCATGGCTGGGCGAGCTGGGCAGTGGGTGACTGGCAGGAAATaGTCAGCTTGGAGGAACGGTGCCCTCGAGGTGGTCAGTAACGGG +
Preference number: 1 (lower is better)
Translates to: HSMAGRAGQWVTGRK*SAWRNGALEVVSNG
Trigger: CCCGTTACTGACCACCTCGAGGGCACCGTTCCTCCAAGCTGACCATTTCCTGCCAGTCACCCACTGCCCAGCTCGCCCAGCCATGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp TCGTTCTCTGCCCTCAAGCGAGGAGTAGGTGGGCGCAGTGAGCGGTaGGGTGGACGCGTGCTCTCCTACCAGACCCTGCTTGTAACCTGG +
Preference number: 1 (lower is better)
Translates to: SFSALKRGVGGRSER*GGRVLSYQTLLVTW
Trigger: CCAGGTTACAAGCAGGGTCTGGTAGGAGAGCACGCGTCCACCCCACCGCTCACTGCGCCCACCTACTCCTCGCTTGAGGGCAGAGAACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp CTGCACCTTGCAGGTCTGGAAGCGGTCGGTGAAAGTCCTGAGGTGTaGGTCCCCGAAGAGGCCACAGTGCGTGTAGTTGGGGGTGGCCGA +
Preference number: 1 (lower is better)
Translates to: LHLAGLEAVGESPEV*VPEEATVRVVGGGR
Trigger: TCGGCCACCCCCAACTACACGCACTGTGGCCTCTTCGGGGACCCACACCTCAGGACTTTCACCGACCGCTTCCAGACCTGCAAGGTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR GCA 90 bp GGCAACTGGAGTCAAACATCAAGTCCTCCCGGAGCCGGAGAGCCCTaGAGTACTTTGGCTGCTCTGTGGCCTCACCTGGGACCCCTGGTC +
Preference number: 1 (lower is better)
Translates to: GNWSQTSSPPGAGEP*STLAALWPHLGPLV
Trigger: GACCAGGGGTCCCAGGTGAGGCCACAGAGCAGCCAAAGTACTGCAGGGCTCTCCGGCTCCGGGAGGACTTGATGTTTGACTCCAGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp ATGAGGGTCAGAGAACCTCCTGTGAGCTCCGTGAGGACAAGGGTGTaGCGCTTCCTTCTGCCACCCGCATCCCCTTCCCTGATGGGCTGG +
Preference number: 1 (lower is better)
Translates to: MRVREPPVSSVRTRV*RFLLPPASPSLMGW
Trigger: CCAGCCCATCAGGGAAGGGGATGCGGGTGGCAGAAGGAAGCGGCACACCCTTGTCCTCACGGAGCTCACAGGAGGTTCTCTGACCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp GGGCACGGGGCCTGTAGTGACGGTTCCGGCCGCCAGGGAAGATGCTaGGTACGTTTTGTCCTTTCCAGTCTGGTTCCTGCCTCCCAAACC +
Preference number: 1 (lower is better)
Translates to: GHGACSDGSGRQGRC*VRFVLSSLVPASQT
Trigger: GGTTTGGGAGGCAGGAACCAGACTGGAAAGGACAAAACGTACCCAGCATCTTCCCTGGCGGCCGGAACCGTCACTACAGGCCCCGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp TTCATGCAGCCAGTAGGTGACAGAGCTGGGAGCCTGGATCGGGTCTaGTTCTGGAGCCCGGGCCCTTCCTTCGGTCTGGGTGTGTCTGTG +
Preference number: 1 (lower is better)
Translates to: FMQPVGDRAGSLDRV*FWSPGPSFGLGVSV
Trigger: CACAGACACACCCAGACCGAAGGAAGGGCCCGGGCTCCAGAACCAGACCCGATCCAGGCTCCCAGCTCTGTCACCTACTGGCTGCATGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp CGGCCCACCTGGCGCACCACGATGGTGGTGCCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCTGACACCTTCTCAGTGATCTTCAGG +
Preference number: 1 (lower is better)
Translates to: RPTWRTTMVVPMYLA*ISTCWPDTFSVIFR
Trigger: CCTGAAGATCACTGAGAAGGTGTCAGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR TCA 90 bp AAATCCCAAGGAGACCACACAGCTCGCGACGGGTTGAGCCAGTTTTaGCGCCAAGTTTGCCTGCAGCCCGAGCCCAAGTGCCACCCCTGC +
Preference number: 1 (lower is better)
Translates to: KSQGDHTARDGLSQF*RQVCLQPEPKCHPC
Trigger: GCAGGGGTGGCACTTGGGCTCGGGCTGCAGGCAAACTTGGCGTCAAAACTGGCTCAACCCGTCGCGAGCTGTGTGGTCTCCTTGGGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp CACACATGCGCGCACACACACATGCGCGCACACACACACACTTGCTaGAGGGGATCCCACCACCAAAGTCCATCCTCCACCCGCCTCAAG +
Preference number: 1 (lower is better)
Translates to: HTCAHTHMRAHTHTC*RGSHHQSPSSTRLK
Trigger: CTTGAGGCGGGTGGAGGATGGACTTTGGTGGTGGGATCCCCTGCAGCAAGTGTGTGTGTGTGCGCGCATGTGTGTGTGCGCGCATGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp AGCCCTGCAGTACTTTGGCTGCTCTGTGGCCTCACCTGGGACCCCTaGTCTGTCCACTTGCTACTGTCCAGTGACAGTGGCTTCCCACCA +
Preference number: 1 (lower is better)
Translates to: SPAVLWLLCGLTWDP*SVHLLLSSDSGFPP
Trigger: TGGTGGGAAGCCACTGTCACTGGACAGTAGCAAGTGGACAGACCAGGGGTCCCAGGTGAGGCCACAGAGCAGCCAAAGTACTGCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp ACGGAAGCCCAAAGCCCAGGCCTAACTGGAAGGCTCAGGGCGGCCTaGGGAGAGATGGGTCAAGGCGGGGATCATTGTCAGAACTCAGAT +
Preference number: 1 (lower is better)
Translates to: TEAQSPGLTGRLRAA*GEMGQGGDHCQNSD
Trigger: ATCTGAGTTCTGACAATGATCCCCGCCTTGACCCATCTCTCCTCAGGCCGCCCTGAGCCTTCCAGTTAGGCCTGGGCTTTGGGCTTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp GAGACACAGGTATGCGAGGGCGGAGGGTGGACTGTTTCTTCAAGATaGCCTCTCCCCAGTTCTGGCTGGTCAGCCTGGGAGTATGTCAGG +
Preference number: 1 (lower is better)
Translates to: ETQVCEGGGWTVSSR*PLPSSGWSAWEYVR
Trigger: CCTGACATACTCCCAGGCTGACCAGCCAGAACTGGGGAGAGGGCATCTTGAAGAAACAGTCCACCCTCCGCCCTCGCATACCTGTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp TCAGATTCTAGCCCGACTCTGAAGGCCGAGCCTGTCACCACCTCATaGAATGGCTTTCCCTGCGGTCTCCCAAGGGGCTTTGCGCCAGTA +
Preference number: 1 (lower is better)
Translates to: SDSSPTLKAEPVTTS*NGFPCGLPRGFAPV
Trigger: TACTGGCGCAAAGCCCCTTGGGAGACCGCAGGGAAAGCCATTGCATGAGGTGGTGACAGGCTCGGCCTTCAGAGTCGGGCTAGAATCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp CCCGCAGCCGCCCTGCCTGGCAGGTCCCGAGTCCTCTCATACAGGTaGAGTTTGTCTTTGTTGGAGTGGAGCATCTTGACATCCTCCAAC +
Preference number: 1 (lower is better)
Translates to: PAAALPGRSRVLSYR*SLSLLEWSILTSSN
Trigger: GTTGGAGGATGTCAAGATGCTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR CCA 90 bp GGACAGGGTGATGCTGGGCGACATGAATGTTTTCGCCTTGGGATCTaGGCTGCCTGGGATCACAGCCCTCATTCCGGAACGCCACTGACA +
Preference number: 1 (lower is better)
Translates to: GQGDAGRHECFRLGI*AAWDHSPHSGTPLT
Trigger: TGTCAGTGGCGTTCCGGAATGAGGGCTGTGATCCCAGGCAGCCCAGATCCCAAGGCGAAAACATTCATGTCGCCCAGCATCACCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp CGGTGGGGTGGACGCGTGCTCTCCTACCAGACCCTGCTTGTAACCTaGAGTGGGTCAGTTGGCTTCTCTTTGCTTCTGTCTGTCCGTCTG +
Preference number: 1 (lower is better)
Translates to: RWGGRVLSYQTLLVT*SGSVGFSLLLSVRL
Trigger: CAGACGGACAGACAGAAGCAAAGAGAAGCCAACTGACCCACTCCAGGTTACAAGCAGGGTCTGGTAGGAGAGCACGCGTCCACCCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp GGAGAGGGCTCCAATTCCTGCTGGGGAGAGCTGAGGGAGCAGGTTTaGGTTCAGATGTGGAAGAATCCAAGTGCCGTCTCAGGGTCACCC +
Preference number: 1 (lower is better)
Translates to: GEGSNSCWGELREQV*VQMWKNPSAVSGSP
Trigger: GGGTGACCCTGAGACGGCACTTGGATTCTTCCACATCTGAACTCAAACCTGCTCCCTCAGCTCTCCCCAGCAGGAATTGGAGCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp TGGCTGAACGGCCTGGAGAGGGCTCCAATTCCTGCTGGGGAGAGCTaGGGGAGCAGGTTTGAGTTCAGATGTGGAAGAATCCAAGTGCCG +
Preference number: 1 (lower is better)
Translates to: WLNGLERAPIPAGES*GSRFEFRCGRIQVP
Trigger: CGGCACTTGGATTCTTCCACATCTGAACTCAAACCTGCTCCCTCAGCTCTCCCCAGCAGGAATTGGAGCCCTCTCCAGGCCGTTCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp TCTTCTCTGGGCAGATCTGCTTGGCCAGACACATTCTGCTTTGGCTaGACGGCCTGGAGAGGGCTCCAATTCCTGCTGGGGAGAGCTGAG +
Preference number: 1 (lower is better)
Translates to: SSLGRSAWPDTFCFG*TAWRGLQFLLGRAE
Trigger: CTCAGCTCTCCCCAGCAGGAATTGGAGCCCTCTCCAGGCCGTTCAGCCAAAGCAGAATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp TGGACAGGGACCGCTGCAGCTGGGAAGAGAGATTGGGGTCCCCTCTaGATACAGTACAGGCAAGTGGGAATTGATGGCCAAGGAGCAGGG +
Preference number: 1 (lower is better)
Translates to: WTGTAAAGKRDWGPL*IQYRQVGIDGQGAG
Trigger: CCCTGCTCCTTGGCCATCAATTCCCACTTGCCTGTACTGTATTCAGAGGGGACCCCAATCTCTCTTCCCAGCTGCAGCGGTCCCTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp ACGCACACACACAGGCATGCATACACACATGCGCGCACACACACATaGGCGCACACACACACACTTGCTGCAGGGGATCCCACCACCAAA +
Preference number: 1 (lower is better)
Translates to: THTHRHAYTHARTHT*AHTHTLAAGDPTTK
Trigger: TTTGGTGGTGGGATCCCCTGCAGCAAGTGTGTGTGTGTGCGCGCATGTGTGTGTGCGCGCATGTGTGTATGCATGCCTGTGTGTGTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp TTTGGCTGCTCTGTGGCCTCACCTGGGACCCCTGGTCTGTCCACTTaGTACTGTCCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCC +
Preference number: 1 (lower is better)
Translates to: FGCSVASPGTPGLST*YCPVTVASHHPLNS
Trigger: GGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGGACAGTAGCAAGTGGACAGACCAGGGGTCCCAGGTGAGGCCACAGAGCAGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp AGAGCTGAGGGAGCAGGTTTGAGTTCAGATGTGGAAGAATCCAAGTaGCGTCTCAGGGTCACCCTGGGCAAGGACAGGGTGATGCTGGGC +
Preference number: 1 (lower is better)
Translates to: RAEGAGLSSDVEESK*RLRVTLGKDRVMLG
Trigger: GCCCAGCATCACCCTGTCCTTGCCCAGGGTGACCCTGAGACGGCACTTGGATTCTTCCACATCTGAACTCAAACCTGCTCCCTCAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp GATGCTGGGCGACATGAATGTTTTCGCCTTGGGATCTGGGCTGCCTaGGATCACAGCCCTCATTCCGGAACGCCACTGACATTACGAGCG +
Preference number: 1 (lower is better)
Translates to: DAGRHECFRLGIWAA*DHSPHSGTPLTLRA
Trigger: CGCTCGTAATGTCAGTGGCGTTCCGGAATGAGGGCTGTGATCCCAGGCAGCCCAGATCCCAAGGCGAAAACATTCATGTCGCCCAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp CTATTTCCCAAGGAGGTAGACGTGGTGTCCAGAGGACGACAAAGATaGCAGCTCACCATGCACGTGGACCAGAGCCCACTCCATGGCTGG +
Preference number: 1 (lower is better)
Translates to: LFPKEVDVVSRGRQR*QLTMHVDQSPLHGW
Trigger: CCAGCCATGGAGTGGGCTCTGGTCCACGTGCATGGTGAGCTGCCATCTTTGTCGTCCTCTGGACACCACGTCTACCTCCTTGGGAAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp GTCAAGGCGGGGATCATTGTCAGAACTCAGATTCTAGCCCGACTCTaGAGGCCGAGCCTGTCACCACCTCATGCAATGGCTTTCCCTGCG +
Preference number: 1 (lower is better)
Translates to: VKAGIIVRTQILARL*RPSLSPPHAMAFPA
Trigger: CGCAGGGAAAGCCATTGCATGAGGTGGTGACAGGCTCGGCCTTCAGAGTCGGGCTAGAATCTGAGTTCTGACAATGATCCCCGCCTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp CCCTGCTCCATGCCACTTGCTGGCACAGCTCTGATGACTGTCTCCTaGCTGGCTCTGACGGGTCTCTGCCCAAGTGTTCTGGTAATGATT +
Preference number: 1 (lower is better)
Translates to: PCSMPLAGTALMTVS*LALTGLCPSVLVMI
Trigger: AATCATTACCAGAACACTTGGGCAGAGACCCGTCAGAGCCAGGCAGGAGACAGTCATCAGAGCTGTGCCAGCAAGTGGCATGGAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp TTGTTCTTCTCTGGGCAGATCTGCTTGGCCAGACACATTCTGCTTTaGCTGAACGGCCTGGAGAGGGCTCCAATTCCTGCTGGGGAGAGC +
Preference number: 1 (lower is better)
Translates to: LFFSGQICLARHILL*LNGLERAPIPAGES
Trigger: GCTCTCCCCAGCAGGAATTGGAGCCCTCTCCAGGCCGTTCAGCCAAAGCAGAATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp CTAAACAAGAACTCCAGTTCTCGGCAACACATCAGTGAGACAGGATaGGGCGGGGAGAGGCGCCCACCTCCGTGTGCTAATGCATTTACC +
Preference number: 1 (lower is better)
Translates to: LNKNSSSRQHISETG*GGERRPPPCANAFT
Trigger: GGTAAATGCATTAGCACACGGAGGTGGGCGCCTCTCCCCGCCCCATCCTGTCTCACTGATGTGTTGCCGAGAACTGGAGTTCTTGTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp CCTTGGCTGTGCCGATTCAGAAGGTGGTGGTTTCCCAGGGGACAATaGGAACTTCCACGGAATGAGGTCTGTAGACTCCTGGTTAGAGGG +
Preference number: 1 (lower is better)
Translates to: PWLCRFRRWWFPRGQ*ELPRNEVCRLLVRG
Trigger: CCCTCTAACCAGGAGTCTACAGACCTCATTCCGTGGAAGTTCCCATTGTCCCCTGGGAAACCACCACCTTCTGAATCGGCACAGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp GGGTGGACGCGTGCTCTCCTACCAGACCCTGCTTGTAACCTGGAGTaGGTCAGTTGGCTTCTCTTTGCTTCTGTCTGTCCGTCTGTAAAC +
Preference number: 1 (lower is better)
Translates to: GWTRALLPDPACNLE*VSWLLFASVCPSVN
Trigger: GTTTACAGACGGACAGACAGAAGCAAAGAGAAGCCAACTGACCCACTCCAGGTTACAAGCAGGGTCTGGTAGGAGAGCACGCGTCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp CTGAATGTGCCCCCAAATCCAGACTACGACCAGCCACATCGGGGGTaGCCTACAAATGTTTGTGCCAGGAAGGAAGGGAAGAAGGACTCC +
Preference number: 1 (lower is better)
Translates to: LNVPPNPDYDQPHRG*PTNVCARKEGKKDS
Trigger: GGAGTCCTTCTTCCCTTCCTTCCTGGCACAAACATTTGTAGGCCACCCCCGATGTGGCTGGTCGTAGTCTGGATTTGGGGGCACATTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp CAGAGGGCACCATATGTCTCTCCACCACATAGTCACCTGTCTCCCTaGCTGTGTTCCACTGTCACTAGAACAAGAGGATCTGGGCCTGCC +
Preference number: 1 (lower is better)
Translates to: QRAPYVSPPHSHLSP*LCSTVTRTRGSGPA
Trigger: GGCAGGCCCAGATCCTCTTGTTCTAGTGACAGTGGAACACAGTCAGGGAGACAGGTGACTATGTGGTGGAGAGACATATGGTGCCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp TCACAGCCCTCATTCCGGAACGCCACTGACATTACGAGCGTGCCTTaGACACTGGCTGCCTGCAGCTGTCTATTAATTCAGACCATCCTG +
Preference number: 1 (lower is better)
Translates to: SQPSFRNATDITSVP*TLAACSCLLIQTIL
Trigger: CAGGATGGTCTGAATTAATAGACAGCTGCAGGCAGCCAGTGTGCAAGGCACGCTCGTAATGTCAGTGGCGTTCCGGAATGAGGGCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp CCCAGACAGTGTCTGAACACGTCTTTGTTCTTCTCTGGGCAGATCTaGTTGGCCAGACACATTCTGCTTTGGCTGAACGGCCTGGAGAGG +
Preference number: 1 (lower is better)
Translates to: PRQCLNTSLFFSGQI*LARHILLWLNGLER
Trigger: CCTCTCCAGGCCGTTCAGCCAAAGCAGAATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACACTGTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp CTGCTGCTTCCCATATTGCCAACTGCCTTATGTCCTTTACAGTCCTaGGGTCAGCATGGCCCCGAGCCAGCTCACCAGGGTAATAAACTG +
Preference number: 1 (lower is better)
Translates to: LLLPILPTALCPLQS*GQHGPEPAHQGNKL
Trigger: CAGTTTATTACCCTGGTGAGCTGGCTCGGGGCCATGCTGACCGCAGGACTGTAAAGGACATAAGGCAGTTGGCAATATGGGAAGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp AGCCTGGGAGTATGTCAGGGCAGGGGTGGCGTGGCATGCAGGAGCTaGCCCATGGACATTGCCTTAATGAACGAAACTGTTAGTTGTTTT +
Preference number: 1 (lower is better)
Translates to: SLGVCQGRGGVACRS*PMDIALMNETVSCF
Trigger: AAAACAACTAACAGTTTCGTTCATTAAGGCAATGTCCATGGGGCAGCTCCTGCATGCCACGCCACCCCTGCCCTGACATACTCCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp CAGAGCTCTTGCATCGTTTCCTTGACGGGGTGCTTTGGGGACTGCTaGTTCCCATATTGCCAACTGCCTTATGTCCTTTACAGTCCTGCG +
Preference number: 1 (lower is better)
Translates to: QSSCIVSLTGCFGDC*FPYCQLPYVLYSPA
Trigger: CGCAGGACTGTAAAGGACATAAGGCAGTTGGCAATATGGGAAGCAGCAGTCCCCAAAGCACCCCGTCAAGGAAACGATGCAAGAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp CGTGCTCTCCTACCAGACCCTGCTTGTAACCTGGAGTGGGTCAGTTaGCTTCTCTTTGCTTCTGTCTGTCCGTCTGTAAACCAGGGCAAT +
Preference number: 1 (lower is better)
Translates to: RALLPDPACNLEWVS*LLFASVCPSVNQGN
Trigger: ATTGCCCTGGTTTACAGACGGACAGACAGAAGCAAAGAGAAGCCAACTGACCCACTCCAGGTTACAAGCAGGGTCTGGTAGGAGAGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp CTCACCAGGGTAATAAACTGCCACAAGCCCCTTCTCTGTAACAGCTaGCGCTGGCCTTGTTGCACAGATGGAGCTCAGAGTGAGCTCAAA +
Preference number: 1 (lower is better)
Translates to: LTRVINCHKPLLCNS*RWPCCTDGAQSELK
Trigger: TTTGAGCTCACTCTGAGCTCCATCTGTGCAACAAGGCCAGCGTCAGCTGTTACAGAGAAGGGGCTTGTGGCAGTTTATTACCCTGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp GACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTaGTCTAGGGCTGTTACACTGTTTTCTCTGCACAGAATGCTCTGT +
Preference number: 1 (lower is better)
Translates to: DSGFPPSLKLPLCCC*SRAVTLFSLHRMLC
Trigger: ACAGAGCATTCTGTGCAGAGAAAACAGTGTAACAGCCCTAGAGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp GGACAGAGCTCTTGCATCGTTTCCTTGACGGGGTGCTTTGGGGACTaGTGCTTCCCATATTGCCAACTGCCTTATGTCCTTTACAGTCCT +
Preference number: 1 (lower is better)
Translates to: GQSSCIVSLTGCFGD*CFPYCQLPYVLYSP
Trigger: AGGACTGTAAAGGACATAAGGCAGTTGGCAATATGGGAAGCAGCAGTCCCCAAAGCACCCCGTCAAGGAAACGATGCAAGAGCTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp GTCCAGTGGACAGAGCTCTTGCATCGTTTCCTTGACGGGGTGCTTTaGGGACTGCTGCTTCCCATATTGCCAACTGCCTTATGTCCTTTA +
Preference number: 1 (lower is better)
Translates to: VQWTELLHRFLDGVL*GLLLPILPTALCPL
Trigger: TAAAGGACATAAGGCAGTTGGCAATATGGGAAGCAGCAGTCCCCAAAGCACCCCGTCAAGGAAACGATGCAAGAGCTCTGTCCACTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp GGAACCTCTGGCCCACTTCCCTTTTCTCTGTGGAGCTCGTTACCATaGGACCCTGGGTTTTGTAACTGTGGTTTATTGCCTTGTCTTTCC +
Preference number: 1 (lower is better)
Translates to: GTSGPLPFSLWSSLP*DPGFCNCGLLPCLS
Trigger: GGAAAGACAAGGCAATAAACCACAGTTACAAAACCCAGGGTCCCATGGTAACGAGCTCCACAGAGAAAAGGGAAGTGGGCCAGAGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp GTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATaGTGTGTTCCATATTCACGACGGCATTTCCATGCTCGTGAGGGC +
Preference number: 1 (lower is better)
Translates to: VLQDEAASWESFSSG*CVPYSRRHFHAREG
Trigger: GCCCTCACGAGCATGGAAATGCCGTCGTGAATATGGAACACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 90 bp AAACCAATTCCCCAGACAGTGTCTGAACACGTCTTTGTTCTTCTCTaGGCAGATCTGCTTGGCCAGACACATTCTGCTTTGGCTGAACGG +
Preference number: 1 (lower is better)
Translates to: KPIPQTVSEHVFVLL*ADLLGQTHSALAER
Trigger: CCGTTCAGCCAAAGCAGAATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACACTGTCTGGGGAATTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp GAACAAGAGGATCTGGGCCTGCCAAGCTCCAAAGACAGCTCATCGTaGGGAGGAAAAGTGACTTTACAAAAGCAATGTGTGGTGGCTGTT +
Preference number: 1 (lower is better)
Translates to: EQEDLGLPSSKDSSS*GGKVTLQKQCVVAV
Trigger: AACAGCCACCACACATTGCTTTTGTAAAGTCACTTTTCCTCCTCACGATGAGCTGTCTTTGGAGCTTGGCAGGCCCAGATCCTCTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp CTCAGGATGCTGTGTTCCATATTCACGACGGCATTTCCATGCTCGTaGGGGCAACCAGTAGTAAGTAGCATGGCACTTGGGAAAGAATTC +
Preference number: 1 (lower is better)
Translates to: LRMLCSIFTTAFPCS*GQPVVSSMALGKEF
Trigger: GAATTCTTTCCCAAGTGCCATGCTACTTACTACTGGTTGCCCTCACGAGCATGGAAATGCCGTCGTGAATATGGAACACAGCATCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp CCAATCAGACCAAAGAGATGTGATTTCTGGACCATACCTGAGATTTaGACACAGGAAAGTGCAGTCCCTGCCCTTGTGTGTCTTGTCTGC +
Preference number: 1 (lower is better)
Translates to: PIRPKRCDFWTIPEI*TQESAVPALVCLVC
Trigger: GCAGACAAGACACACAAGGGCAGGGACTGCACTTTCCTGTGTGCAAATCTCAGGTATGGTCCAGAAATCACATCTCTTTGGTCTGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp ATGTTTGTGCCAGGAAGGAAGGGAAGAAGGACTCCTCTTGTTTTATaGAACCAACACCCACCCTGGGGCACTTGCCTTAAGGGATTAATC +
Preference number: 1 (lower is better)
Translates to: MFVPGRKGRRTPLVL*NQHPPWGTCLKGLI
Trigger: GATTAATCCCTTAAGGCAAGTGCCCCAGGGTGGGTGTTGGTTGCATAAAACAAGAGGAGTCCTTCTTCCCTTCCTTCCTGGCACAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp AATGGGCCTGAATTTCTTCCTGATTCACTGGGTAGTTTGTACAGATaGAATGTGATCACAGCTGCCAATAAACCTGGTCCCACAGTGACG +
Preference number: 1 (lower is better)
Translates to: NGPEFLPDSLGSLYR*NVITAANKPGPTVT
Trigger: CGTCACTGTGGGACCAGGTTTATTGGCAGCTGTGATCACATTTCATCTGTACAAACTACCCAGTGAATCAGGAAGAAATTCAGGCCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp TTGATTGGATTGGAGGATGCAAAGTATCGTTCCTGGGTGTGTCTGTaGGGCTGTCGCCAAAGGAAATTAACATTTGAGTCAGTGAACTGG +
Preference number: 1 (lower is better)
Translates to: LIGLEDAKYRSWVCL*GCRQRKLTFESVNW
Trigger: CCAGTTCACTGACTCAAATGTTAATTTCCTTTGGCGACAGCCTCACAGACACACCCAGGAACGATACTTTGCATCCTCCAATCCAATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp TTCTTTATCCAGTCTATCATTGAGCCCATTATTTCTGATAATCGCTaGATTGCCACTGCCTCAGACTGGCTCCTGACTTCCTCTTTCTTC +
Preference number: 1 (lower is better)
Translates to: FFIQSIIEPIISDNR*IATASDWLLTSSFF
Trigger: GAAGAAAGAGGAAGTCAGGAGCCAGTCTGAGGCAGTGGCAATGCAGCGATTATCAGAAATAATGGGCTCAATGATAGACTGGATAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 90 bp CATCCATGTCCCTGCAAAGGACATGAACTCATCCCTTTTTATGGCTaGATAGTACTCCATGGCGTATATGTGCCACATTTTCTTTATCCA +
Preference number: 1 (lower is better)
Translates to: HPCPCKGHELIPFYG*IVLHGVYVPHFLYP
Trigger: TGGATAAAGAAAATGTGGCACATATACGCCATGGAGTACTATGCAGCCATAAAAAGGGATGAGTTCATGTCCTTTGCAGGGACATGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 90 bp TGTCCGTCTGTAAACCAGGGCAATATCTGCTTTCTAGGGTTTTTGTaGAATTTGACAAAGCAATGCAGGACTCGTTTCTATTTCCCAAGG +
Preference number: 1 (lower is better)
Translates to: CPSVNQGNICFLGFL*NLTKQCRTRFYFPR
Trigger: CCTTGGGAAATAGAAACGAGTCCTGCATTGCTTTGTCAAATTTCACAAAAACCCTAGAAAGCAGATATTGCCCTGGTTTACAGACGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAGTGCGCAGGCGTGGCTaGGAGGTGGGGCCATCCTTG +
Preference number: 2 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGVRRRG*EVGPSL
Trigger: CAAGGATGGCCCCACCTCGCAGCCACGCCTGCGCAC...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGAGATCTGCACCCCGTaGGCGGTCCCAGCCCACACA +
Preference number: 2 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHEICTP*AVPAHT
Trigger: TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTC...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
3UTR CAA 90 bp GCAGGGCTGGCGGCTGCCAGCCTGCGGGCACCGGTGCCCTCAGCATaGGTGTGGAAGGCCTGGAAGTCGATCTGCTGGTTGAGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: AGLAAASLRAPVPSA*VWKAWKSICWLRGQ
Trigger: CTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGCCAGCCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR-3UTR CCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACAGAGATCTGCACCCCGTaGGCGGTCCCAGCCCACACA +
Preference number: 2 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTEICTP*AVPAHT
Trigger: TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTC...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
3UTR-3UTR CCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCGGGAGGTGGGTAGGTTaGGGGCATAACAGCTGCCCT +
Preference number: 2 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGGRWVG*GHNSCP
Trigger: AGGGCAGCTGTTATGCCCCCAACCTACCCACCTCCC...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR TCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAAGTAGGCGGCCAGTGTaGAGTTCACGTCGCCCGTGG +
Preference number: 2 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGSRRPV*SSRRPW
Trigger: CCACGGGCGACGTGAACTTCACACTGGCCGCCTACT...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR GCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGAAGGGGAGGGGTCCGTaGCTGAGCCCTTGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGKGRGP*LSPWQQ
Trigger: CTGCTGCCAAGGGCTCAGGCACGGACCCCTCCCCTT...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp GCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGCCTGGAAGTCGGAGATCTGCACCCCGTaGGCGGTCCCAGCCCACACA +
Preference number: 2 (lower is better)
Translates to: ASLRAPVPSALVWKAWKSEICTP*AVPAHT
Trigger: TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTC...CGACTTCCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CCA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGGCAGCAGGCGGTCCCTaGCGTTCTGCGGGGCCATGG +
Preference number: 2 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGAAGGP*RSAGPW
Trigger: CCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGC...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCCCGTGCCTGAGCCCTTaGCAGCAGGCGGTCCCTGGC +
Preference number: 2 (lower is better)
Translates to: TCTGTHSSQVNMGREATGPCLSP*QQAVPG
Trigger: GCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGG...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAGCCCACACACGGTTCTaGCAGAGGGAGCAGGACCTC +
Preference number: 2 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGAHTRF*QREQDL
Trigger: GAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGC...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR CAA 90 bp CTCCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTaGGAGGGAGGGGGAGACACACGTTCTGCAGCCTCCTGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: LPPAHTRFWQREQDL*EGGGDTRSAASWPV
Trigger: CACTGGCCAGGAGGCTGCAGAACGTGTGTCTCCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR TCA 90 bp GGAGCGCCCCGCCCCAGCTCGTTCTCTGCCCTCAAGCGAGGAGTAGGTGGGCGCAGTGGGAGGATTGCTTaGGCCCAGGAAGTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: GAPRPSSFSALKRGVGGRSGRIA*AQEVEA
Trigger: AGCCTCCACTTCCTGGGCTCAAGCAATCCTCCCACT...GCGCCCACCTACTCCTCGCTTGAGGGCAGAGAACGAGCTGGGGCGGGGCGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp CGGCCCACCTGGCGCACCACGATGGTGGTGCCGATGTACTTGGCCTGGATCTCCACACGCCAGGAGATCTaGACCCCGTGGGCGGTCCCA +
Preference number: 2 (lower is better)
Translates to: RPTWRTTMVVPMYLAWISTRQEI*TPWAVP
Trigger: TGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT...GGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR GCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACCTCCAGGGCCTGGCTaGACTTTTGGGAGTGAAGCC +
Preference number: 2 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGPPGPG*TFGSEA
Trigger: GGCTTCACTCCCAAAAGTGCAGCCAGGCCCTGGAGG...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGTCTGCGGGGCCATGGTaGACACGCCAGGAGATCTGC +
Preference number: 2 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGSAGPW*TRQEIC
Trigger: GCAGATCTCCTGGCGTGTCCACCATGGCCCCGCAGA...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGGCACAGCAGCACAGGTaGGACTGTTCTGGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGAQQHR*DCSGPL
Trigger: CAGGGGCCCAGAACAGTCCCACCTGTGCTGCTGTGC...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp GCAGCCCCGCAGCCGCCCTGCCTGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGGCGCACCACGATGGTaGTGCCGATGTACTTGGCCT +
Preference number: 2 (lower is better)
Translates to: AAPQPPCLAGPESSHTGAGAPRW*CRCTWP
Trigger: AGGCCAAGTACATCGGCACCACCATCGTGGTGCGCC...TGCACCTGTATGAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCGGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR-3UTR GCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGATGCACAGGGCGTAGCTaGGCAAGGCTGCACAGAACT +
Preference number: 2 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGCTGRS*ARLHRT
Trigger: AGTTCTGTGCAGCCTTGCGCAGCTACGCCCTGTGCA...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGACGTTCTGCGGGGCCATaGTGGACACGCCAGGAGATC +
Preference number: 2 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGRSAGP*WTRQEI
Trigger: GATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACG...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp TCTGGAGCCCGGGCCCTTCCTTCGGTCTGGGTGTGTCTGTGCCCATGCCACTGTTCAGGGCAGGCCAGCTaGCCCCATCCACTGGGTCTC +
Preference number: 2 (lower is better)
Translates to: SGARALPSVWVCLCPCHCSGQAS*PHPLGL
Trigger: GAGACCCAGTGGATGGGGCCAGCTGGCCTGCCCTGA...ACAGTGGCATGGGCACAGACACACCCAGACCGAAGGAAGGGCCCGGGCTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCGGCCGGGCCTTTCAGTaGATTGCGAGGGGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: TCTGTHSSQVNMGREATGGRAFQ*IARGKE
Trigger: CTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCC...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGGCCAAGCCCCAAGGATaGCTCCCTGTGTGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGAKPQG*LPVWLG
Trigger: CCCCAGCCACACAGGGAGGCATCCTTGGGGCTTGGC...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR GCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAAGAGTCCTAAGACCCTaGTCCTCTCCCCAGACTCCA +
Preference number: 2 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGRVLRP*SSPQTP
Trigger: TGGAGTCTGGGGAGAGGAGCAGGGTCTTAGGACTCT...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGCGGGCACGACCTACTaGCCAAAAGGTTCCAGCAGT +
Preference number: 2 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRAGTTY*PKGSSS
Trigger: ACTGCTGGAACCTTTTGGCCAGTAGGTCGTGCCCGC...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGCGTTCTGCAGCCTCCTaGCCAGTGTATGAGAGGTCC +
Preference number: 2 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGRSAAS*PVYERS
Trigger: GGACCTCTCATACACTGGCCAGGAGGCTGCAGAACG...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp GTCCCAGTCCTCCACAGCATTGACCACTTCCTCTGGCATGCGGACGGCAAAGGTTCTGAGGCTGGGGCGTaGCTGCCCGACGTGGCGCTC +
Preference number: 2 (lower is better)
Translates to: VPVLHSIDHFLWHADGKGSEAGA*LPDVAL
Trigger: GAGCGCCACGTCGGGCAGCCACGCCCCAGCCTCAGA...ACCTTTGCCGTCCGCATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR TCA 90 bp GCTGCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGCCTGGAAGACTCAGAGTTGCACTTaGGGATCTTGCACGGGGAGG +
Preference number: 2 (lower is better)
Translates to: AASLRAPVPSALVWKAWKTQSCT*GSCTGR
Trigger: CCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGT...CTTCCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGGCCCACACACGGTTCTaGCAGAGGGAGCAGGACCTC +
Preference number: 2 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGAHTRF*QREQDL
Trigger: GAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGC...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp ACCCTCTGCTCACCCCAGAACCAGAGCCCTGGTTTGACTCCGCCCCTGCTGTGGCCATGGTCACACTGCTaGGGAGGTGGAGAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: TLCSPQNQSPGLTPPLLWPWSHC*GGGEAR
Trigger: CCTGGCTTCTCCACCTCCCCAGCAGTGTGACCATGG...CCACAGCAGGGGCGGAGTCAAACCAGGGCTCTGGTTCTGGGGTGAGCAGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp ACCCTCTGCTCACCCCAGAACCAGAGCCCTGGTTTGACTCCGCCCCTGCTGTGGCCCTCTCCCCAGTTCTaGCTGGTCAGCCTGGGAGTA +
Preference number: 2 (lower is better)
Translates to: TLCSPQNQSPGLTPPLLWPSPQF*LVSLGV
Trigger: TACTCCCAGGCTGACCAGCCAGAACTGGGGAGAGGG...CCACAGCAGGGGCGGAGTCAAACCAGGGCTCTGGTTCTGGGGTGAGCAGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp ACCCTCTGCTCACCCCAGAACCAGAGCCCTGGTTTGACTCCGCCCCTGCTGTGGGGGATCTGGGCTGCCTaGGATCACAGCCCTCATTCC +
Preference number: 2 (lower is better)
Translates to: TLCSPQNQSPGLTPPLLWGIWAA*DHSPHS
Trigger: GGAATGAGGGCTGTGATCCCAGGCAGCCCAGATCCC...CCACAGCAGGGGCGGAGTCAAACCAGGGCTCTGGTTCTGGGGTGAGCAGAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 90 bp AGACCACACAGCTCGCGACGGGTTGAGCCAGTTTTGACGCCAAGTTaGCCTGCAGCCCGAGCCCAAGTGCCACCCCTGCTCCATGCCACT +
Preference number: 2 (lower is better)
Translates to: RPHSSRRVEPVLTPS*PAARAQVPPLLHAT
Trigger: AGTGGCATGGAGCAGGGGTGGCACTTGGGCTCGGGCTGCAGGCAAACTTGGCGTCAAAACTGGCTCAACCCGTCGCGAGCTGTGTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR TCA 90 bp TCTGGAGCCCGGGCCCTTCCTTCGGTCTGGGTGTGTCTGTGCCCATGCCACTGTACAGGCCCCAGTGTGTaGTGTTCCCTTCCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: SGARALPSVWVCLCPCHCTGPSV*CSLPCV
Trigger: GACACAGGGAAGGGAACATCACACACTGGGGCCTGT...ACAGTGGCATGGGCACAGACACACCCAGACCGAAGGAAGGGCCCGGGCTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR TCA 90 bp CGCAGCCGCCCTGCCTGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCGGTAATTATTGTCGATaGGCGGCCAGGCGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: RSRPAWQVPSPLIQVQFVGNYCR*AARRPA
Trigger: TGCAGGGCGCCTGGCCGCTCATCGACAATAATTACC...GACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGGAGATCTGCACCCCGTaGGCGGTCCCAGCCCACACA +
Preference number: 2 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVEICTP*AVPAHT
Trigger: TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTC...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp CAAGTCCACTCAAGAAGGCGGTTGCCGGAGTTTTCCTGCTCCACCCTGGGGAGGGCACAGCAGCACAGGTaGGACTGTTCTGGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: QVHSRRRLPEFSCSTLGRAQQHR*DCSGPL
Trigger: CAGGGGCCCAGAACAGTCCCACCTGTGCTGCTGTGC...CCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACCAGAGGGGCTGCCGATaGGTGGGTAGGGTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHQRGCR*VGRVWS
Trigger: GCTCCACACCCTACCCACCCATCGGCAGCCCCTCTG...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp GTGCCCTCGAGGTGGTCAGTAACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACCCGGACGAGCACCAATaGCTCCGCTCCTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: VPSRWSVTGGLKRTAASYPDEHQ*LRSSLL
Trigger: CAGCAAGGAGGAGCGGAGCCATTGGTGCTCGTCCGG...GTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTTACTGACCACCTCGAGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp CGCAGCCGCCCTGCCTGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTCTTGCACGGGGAGGTaGGTAGGTTGGGGGCATAAC +
Preference number: 2 (lower is better)
Translates to: RSRPAWQVPSPLIQVQFVSCTGR*VGWGHN
Trigger: GTTATGCCCCCAACCTACCCACCTCCCCGTGCAAGA...GACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CCA 90 bp TTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCAGGGCTGGCCTGGTACACCTTCTaGTCCACACACTCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: LATAVSYGKVSGAVGAGLAWYTF*STHSWK
Trigger: CTTCCAGGAGTGTGTGGACCAGAAGGTGTACCAGGC...CAGCCCTGCACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR GCA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTCACAACCTTGTCACGTaGACTAGAAGGGGAGGGGTC +
Preference number: 2 (lower is better)
Translates to: RAAVGRAFQCIARGKELTHNLVT*TRRGGV
Trigger: GACCCCTCCCCTTCTAGTGCACGTGACAAGGTTGTG...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGGGCCTTTCAGTGCATTaGGAGGGGGAAGGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGGLSVH*EGEGAD
Trigger: GTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCC...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp GCAGAGGTAGAGACCCTGGCTGTCCCAGTCCTCCACAGCATTGACCACTTCCTCCGTTCTGCGGGGCCATaGTGGACACGCCAGGAGATC +
Preference number: 2 (lower is better)
Translates to: AEVETLAVPVLHSIDHFLRSAGP*WTRQEI
Trigger: GATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACG...GAGGAAGTGGTCAATGCTGTGGAGGACTGGGACAGCCAGGGTCTCTACCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGGCGGGCACGACCTACTaGCCAAAAGGTTCCAGCAGT +
Preference number: 2 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGAGTTY*PKGSSS
Trigger: ACTGCTGGAACCTTTTGGCCAGTAGGTCGTGCCCGC...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGGACTCCAGACGTGGATaGACCGGGCTGGGGGCTCTT +
Preference number: 2 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVDSRRG*TGLGAL
Trigger: AAGAGCCCCCAGCCCGGTCCATCCACGTCTGGAGTC...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACGCGGCAAGTCTCTCCTaGCTGTGTGGCCACAGGGCT +
Preference number: 2 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHAASLS*LCGHRA
Trigger: AGCCCTGTGGCCACACAGCCAGGAGAGACTTGCCGC...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACGCACAGCAGCACAGGTaGGACTGTTCTGGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHAQQHR*DCSGPL
Trigger: CAGGGGCCCAGAACAGTCCCACCTGTGCTGCTGTGC...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGGGGGCTGCCGATGGGTaGGTAGGGTGTGGAGCTGTA +
Preference number: 2 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVGAADG*VGCGAV
Trigger: TACAGCTCCACACCCTACCCACCCATCGGCAGCCCC...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp GGGAGTCATCCCAGATCTCAGGCTATCCCACCCATCTCATCCCAGAGGGCACCAGGGAGCAGGACCTCTTaGAGGGAGGGGGAGACACAC +
Preference number: 2 (lower is better)
Translates to: GSHPRSQAIPPISSQRAPGSRTS*REGETH
Trigger: GTGTGTCTCCCCCTCCCTCCAAGAGGTCCTGCTCCC...TGGTGCCCTCTGGGATGAGATGGGTGGGATAGCCTGAGATCTGGGATGACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp AACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACTAAGAGCACACGGTGGGCCGGCCCTTCCTTCGGTCTaGGTGTGTCTGTGCCCATGC +
Preference number: 2 (lower is better)
Translates to: NGRAEENSGQLLRAHGGPALPSV*VCLCPC
Trigger: GCATGGGCACAGACACACCCAGACCGAAGGAAGGGC...CGGCCCACCGTGTGCTCTTAGTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp TGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGAGGTCTCGGGGGCTGTaGGTGCAGGGCTGGCGGCTG +
Preference number: 2 (lower is better)
Translates to: WQVPSPLIQVQFVFVGVERSRGL*VQGWRL
Trigger: CAGCCGCCAGCCCTGCACCCACAGCCCCCGAGACCT...CTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR CAA 90 bp CATACACACATGCGCGCACACACACATGCGCGCACACACACACACTaGCTGCAGGGGATCCCACCACCAAAGTCCATCCTCCACCCGCCT +
Preference number: 2 (lower is better)
Translates to: HTHMRAHTHARTHTH*LQGIPPPKSILHPP
Trigger: AGGCGGGTGGAGGATGGACTTTGGTGGTGGGATCCCCTGCAGCAAGTGTGTGTGTGTGCGCGCATGTGTGTGTGCGCGCATGTGTGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 90 bp AAAATCCCAAGGAGACCACACAGCTCGCGACGGGTTGAGCCAGTTTaGACGCCAAGTTTGCCTGCAGCCCGAGCCCAAGTGCCACCCCTG +
Preference number: 2 (lower is better)
Translates to: KIPRRPHSSRRVEPV*TPSLPAARAQVPPL
Trigger: CAGGGGTGGCACTTGGGCTCGGGCTGCAGGCAAACTTGGCGTCAAAACTGGCTCAACCCGTCGCGAGCTGTGTGGTCTCCTTGGGATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 90 bp CTGGGCAAGGACAGGGTGATGCTGGGCGACATGAATGTTTTCGCCTaGGGATCTGGGCTGCCTGGGATCACAGCCCTCATTCCGGAACGC +
Preference number: 2 (lower is better)
Translates to: LGKDRVMLGDMNVFA*GSGLPGITALIPER
Trigger: GCGTTCCGGAATGAGGGCTGTGATCCCAGGCAGCCCAGATCCCAAGGCGAAAACATTCATGTCGCCCAGCATCACCCTGTCCTTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR TCA 90 bp AGGGGTGGCGTGGCATGCAGGAGCTGCCCCATGGACATTGCCTTAATGAACGAAATGAGCACCCTGGGCTaGAATGAGGCGGGAGCCAGC +
Preference number: 2 (lower is better)
Translates to: RGGVACRSCPMDIALMNEMSTLG*NEAGAS
Trigger: GCTGGCTCCCGCCTCATTTCAGCCCAGGGTGCTCAT...TTCGTTCATTAAGGCAATGTCCATGGGGCAGCTCCTGCATGCCACGCCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR TCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACTTCTGGGCCCCTGGATaGGCACCCTGGGCTGAAATG +
Preference number: 2 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHFWAPG*APWAEM
Trigger: CATTTCAGCCCAGGGTGCTCATCCAGGGGCCCAGAA...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR TCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGAGTATGTACACGCGGTaGCACTCCACACAGGTCGCA +
Preference number: 2 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGSMYTR*HSTQVA
Trigger: TGCGACCTGTGTGGAGTGTCACCGCGTGTACATACT...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR TCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGAGTCCTCCACAGCATTaGCCACTTCCTCTGGCATGC +
Preference number: 2 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGSPPQH*PLPLAC
Trigger: GCATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACT...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR GCA 90 bp CCACCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTGGCCGGGCCTTTCAGTaGATTGCGAGGGGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: PPTDRPQCVMFPSLCPCVGRAFQ*IARGKE
Trigger: CTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCC...AACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp GATCACAGCCCTCATTCCGGAACGCCACTGACATTACGAGCGTGCCTTGCACACGTAAGAGTGTGTGCGTaGGTGTGGCGGGCACAGGGG +
Preference number: 2 (lower is better)
Translates to: DHSPHSGTPLTLRACLAHVRVCA*VWRAQG
Trigger: CCCCTGTGCCCGCCACACGCACGCACACACTCTTAC...GTGTGCAAGGCACGCTCGTAATGTCAGTGGCGTTCCGGAATGAGGGCTGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp GGAGCGCCCCGCCCCAGCTCGTTCTCTGCCCTCAAGCGAGGAGTAGGTGGGCGCATAAATAAATGCAATTaGAGAGAGGAGGCGGCCACT +
Preference number: 2 (lower is better)
Translates to: GAPRPSSFSALKRGVGGRINKCN*REEAAT
Trigger: AGTGGCCGCCTCCTCTCTGCAATTGCATTTATTTAT...GCGCCCACCTACTCCTCGCTTGAGGGCAGAGAACGAGCTGGGGCGGGGCGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp GTGGAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACAGGCGCCCTGCACCTTaGAGGTCTGGAAGCGGTCGG +
Preference number: 2 (lower is better)
Translates to: VEHLDILQRVVGGQCEVHRRPAP*RSGSGR
Trigger: CCGACCGCTTCCAGACCTGCAAGGTGCAGGGCGCCT...GTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACTTTCTAAGCACAGGGTaGAAGGGGCAGGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHFLSTG*KGQGPR
Trigger: CCTGGGCCCCTGCCCCTTCCACCCTGTGCTTAGAAA...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp CATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACGTCGCCGACTCCAGACGTGGATaGACCGGGCTGGGGGCTCTT +
Preference number: 2 (lower is better)
Translates to: HLDILQRVVGGQCEVHVADSRRG*TGLGAL
Trigger: AAGAGCCCCCAGCCCGGTCCATCCACGTCTGGAGTC...GGCGACGTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CCA 90 bp ACTGGAGTCAAACATCAAGTCCTCCCGGAGCCGGAGAGCCCTGCAGTACTTTGGGCGGCAAGTCTCTCCTaGCTGTGTGGCCACAGGGCT +
Preference number: 2 (lower is better)
Translates to: TGVKHQVLPEPESPAVLWAASLS*LCGHRA
Trigger: AGCCCTGTGGCCACACAGCCAGGAGAGACTTGCCGC...CCAAAGTACTGCAGGGCTCTCCGGCTCCGGGAGGACTTGATGTTTGACTCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCCAGAGGGGCTGCCGATaGGTGGGTAGGGTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRQRGCR*VGRVWS
Trigger: GCTCCACACCCTACCCACCCATCGGCAGCCCCTCTG...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp AACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACTAAGAGCACACGGTGGGCCGCGTTCTGCAGCCTCCTaGCCAGTGTATGAGAGGTCC +
Preference number: 2 (lower is better)
Translates to: NGRAEENSGQLLRAHGGPRSAAS*PVYERS
Trigger: GGACCTCTCATACACTGGCCAGGAGGCTGCAGAACG...CGGCCCACCGTGTGCTCTTAGTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp CCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTGCTGGTCCCACAGTGACGTaGACAGCAGCCTCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: PVTVASHHPLNSPFAAAAGPTVT*TAASCS
Trigger: GCTGCAGGAGGCTGCTGTCCACGTCACTGTGGGACC...AGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 90 bp CCTGTAGTGACGGTTCCGGCCGCCAGGGAAGATGCTGGGTACGTTTaGTCCTTTCCAGTCTGGTTCCTGCCTCCCAAACCCAACTCCCGT +
Preference number: 2 (lower is better)
Translates to: PVVTVPAAREDAGYV*SFPVWFLPPKPNSR
Trigger: ACGGGAGTTGGGTTTGGGAGGCAGGAACCAGACTGGAAAGGACAAAACGTACCCAGCATCTTCCCTGGCGGCCGGAACCGTCACTACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 90 bp TTTTGGCGGCCTCCATGCGTGGTGCCAGGGCCATGTGCGAGGCCATaGACGAGTGTTAGCTCACTGGATTTCCATACTGACCTCGGGAGG +
Preference number: 2 (lower is better)
Translates to: FWRPPCVVPGPCARP*TSVSSLDFHTDLGR
Trigger: CCTCCCGAGGTCAGTATGGAAATCCAGTGAGCTAACACTCGTCAATGGCCTCGCACATGGCCCTGGCACCACGCATGGAGGCCGCCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR TCA 90 bp CCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTGCTAACCTGGTCCCACAGTaGCGTGGACAGCAGCCTCCT +
Preference number: 2 (lower is better)
Translates to: PVTVASHHPLNSPFAAAANLVPQ*RGQQPP
Trigger: AGGAGGCTGCTGTCCACGTCACTGTGGGACCAGGTT...AGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACTCGTGTAAGAGTGTGTaGGTGCGTGTGGCGGGCACA +
Preference number: 2 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHSCKSV*VRVAGT
Trigger: TGTGCCCGCCACACGCACGCACACACTCTTACACGA...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR GCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGGGGAGACACACGTTCTaGAGCCTCCTGGCCAGTGTA +
Preference number: 2 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVGRHTF*SLLASV
Trigger: TACACTGGCCAGGAGGCTGCAGAACGTGTGTCTCCC...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR GCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACGGGAGACACACGTTCTaGAGCCTCCTGGCCAGTGTA +
Preference number: 2 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHGRHTF*SLLASV
Trigger: TACACTGGCCAGGAGGCTGCAGAACGTGTGTCTCCC...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR GCA 90 bp CAAGTCCACTCAAGAAGGCGGTTGCCGGAGTTTTCCTGCTCCACCCTGGGGAGGAGGAACTGTTCTCTGTaGCGGACGAGCACCAATGGC +
Preference number: 2 (lower is better)
Translates to: QVHSRRRLPEFSCSTLGRRNCSL*RTSTNG
Trigger: GCCATTGGTGCTCGTCCGGCACAGAGAACAGTTCCT...CCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp GATCACAGCCCTCATTCCGGAACGCCACTGACATTACGAGCGTGCCTTGCACACTTTCTAAGCACAGGGTaGAAGGGGCAGGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: DHSPHSGTPLTLRACLAHFLSTG*KGQGPR
Trigger: CCTGGGCCCCTGCCCCTTCCACCCTGTGCTTAGAAA...GTGTGCAAGGCACGCTCGTAATGTCAGTGGCGTTCCGGAATGAGGGCTGTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp AACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACTAAGAGCACACGGTGGGCCGGCCACTGCCTCAGACTaGCTCCTGACTTCCTCTTTC +
Preference number: 2 (lower is better)
Translates to: NGRAEENSGQLLRAHGGPATASD*LLTSSF
Trigger: GAAAGAGGAAGTCAGGAGCCAGTCTGAGGCAGTGGC...CGGCCCACCGTGTGCTCTTAGTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp CCAGACTACGACCAGCCACATCGGGGGTGGCCTACAAATGTTTGTGCCAGGAAGCCAGAACCAGAGCCCTaGTTTGACTCCGCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: PDYDQPHRGWPTNVCARKPEPEP*FDSAPA
Trigger: AGCAGGGGCGGAGTCAAACCAGGGCTCTGGTTCTGG...CTTCCTGGCACAAACATTTGTAGGCCACCCCCGATGTGGCTGGTCGTAGTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp GTGGAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACTGGAAGTCGATCTGCTaGTTGAGGGGGCAGCCCCGC +
Preference number: 2 (lower is better)
Translates to: VEHLDILQRVVGGQCEVHWKSIC*LRGQPR
Trigger: GCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCA...GTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR CAA 90 bp CTTTGGCTGCTCTGTGGCCTCACCTGGGACCCCTGGTCTGTCCACTaGCTACTGTCCAGTGACAGTGGCTTCCCACCATCCCTTAAACTC +
Preference number: 2 (lower is better)
Translates to: LWLLCGLTWDPWSVH*LLSSDSGFPPSLKL
Trigger: GAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGGACAGTAGCAAGTGGACAGACCAGGGGTCCCAGGTGAGGCCACAGAGCAGCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 90 bp ATCTCCACGTGCTGGCCTGACACCTTCTCAGTGATCTTCAGGCTGTaGGCCCCGTGCTTGTCCCCACCGTTCTTAGAGCCATCCACGAAG +
Preference number: 2 (lower is better)
Translates to: ISTCWPDTFSVIFRL*APCLSPPFLEPSTK
Trigger: CTTCGTGGATGGCTCTAAGAACGGTGGGGACAAGCACGGGGCCAACAGCCTGAAGATCACTGAGAAGGTGTCAGGCCAGCACGTGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR-3UTR TCA 90 bp AACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACTAAGAGCACACGGTGGGCCGGAAGAGATTAGAGGTTaGAGACCCTGCCAGGGATGC +
Preference number: 2 (lower is better)
Translates to: NGRAEENSGQLLRAHGGPEEIRG*RPCQGC
Trigger: GCATCCCTGGCAGGGTCTTCAACCTCTAATCTCTTC...CGGCCCACCGTGTGCTCTTAGTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp CCACCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTGGCCTTTCAGTGCATTaGGAGGGGGAAGGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: PPTDRPQCVMFPSLCPCVGLSVH*EGEGAD
Trigger: GTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCC...AACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp AGGGGTGGCGTGGCATGCAGGAGCTGCCCCATGGACATTGCCTTAATGAACGAACTGAAAACCGGGACCTaGACTGGTACCCACAGCAGC +
Preference number: 2 (lower is better)
Translates to: RGGVACRSCPMDIALMNELKTGT*TGTHSS
Trigger: GCTGCTGTGGGTACCAGTGCAGGTCCCGGTTTTCAG...TTCGTTCATTAAGGCAATGTCCATGGGGCAGCTCCTGCATGCCACGCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp CCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTGCTGCACACACACACACTTaGTGCAGGGGATCCCACCAC +
Preference number: 2 (lower is better)
Translates to: PVTVASHHPLNSPFAAAAAHTHT*CRGSHH
Trigger: GTGGTGGGATCCCCTGCAGCAAGTGTGTGTGTGTGC...AGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp GATCACAGCCCTCATTCCGGAACGCCACTGACATTACGAGCGTGCCTTGCACACGGTGCGATCTCTGCTTaGTGCAAGTTCTGCCTCCCG +
Preference number: 2 (lower is better)
Translates to: DHSPHSGTPLTLRACLAHGAISA*CKFCLP
Trigger: CGGGAGGCAGAACTTGCAGCAAGCAGAGATCGCACC...GTGTGCAAGGCACGCTCGTAATGTCAGTGGCGTTCCGGAATGAGGGCTGTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGATACTGTCAAACATCATaGCACCAGTCACCACAACCT +
Preference number: 2 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGYCQTS*HQSPQP
Trigger: AGGTTGTGGTGACTGGTGCCATGATGTTTGACAGTA...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAACCGGGACCTGCACTaGTACCCACAGCAGCCAGGT +
Preference number: 2 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRNRDLH*YPQQPG
Trigger: ACCTGGCTGCTGTGGGTACCAGTGCAGGTCCCGGTT...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp GGGAGTCATCCCAGATCTCAGGCTATCCCACCCATCTCATCCCAGAGGGCACCATCTCTCCTGGCTGTGTaGCCACAGGGCTTAAGGGAA +
Preference number: 2 (lower is better)
Translates to: GSHPRSQAIPPISSQRAPSLLAV*PQGLRE
Trigger: TTCCCTTAAGCCCTGTGGCCACACAGCCAGGAGAGA...TGGTGCCCTCTGGGATGAGATGGGTGGGATAGCCTGAGATCTGGGATGACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp GTGGAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACTCGTGTAAGAGTGTGTaGGTGCGTGTGGCGGGCACA +
Preference number: 2 (lower is better)
Translates to: VEHLDILQRVVGGQCEVHSCKSV*VRVAGT
Trigger: TGTGCCCGCCACACGCACGCACACACTCTTACACGA...GTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR GCA 90 bp ACTGGAGTCAAACATCAAGTCCTCCCGGAGCCGGAGAGCCCTGCAGTACTTTGGAGACCCTGCCAGGGATaGTCAGAGCTGAGAGTCCTA +
Preference number: 2 (lower is better)
Translates to: TGVKHQVLPEPESPAVLWRPCQG*SELRVL
Trigger: TAGGACTCTCAGCTCTGAGCATCCCTGGCAGGGTCT...CCAAAGTACTGCAGGGCTCTCCGGCTCCGGGAGGACTTGATGTTTGACTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp CCACCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTGGCCGCCAGGGAAGATaGTGGGTACGTTTTGTCCTT +
Preference number: 2 (lower is better)
Translates to: PPTDRPQCVMFPSLCPCVGRQGR*WVRFVL
Trigger: AAGGACAAAACGTACCCAGCATCTTCCCTGGCGGCC...AACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp CAAGTCCACTCAAGAAGGCGGTTGCCGGAGTTTTCCTGCTCCACCCTGGGGAGGTCCAGTCATGGTAAATaGCACCACCATTTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: QVHSRRRLPEFSCSTLGRSSHGK*HHHFPR
Trigger: CCTGGGGAAATGGTGGTGCCATTTACCATGACTGGA...CCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp CAAGTCCACTCAAGAAGGCGGTTGCCGGAGTTTTCCTGCTCCACCCTGGGGAGGTTTGAGTCAGTGAACTaGGAGACAGAGACCCACGCT +
Preference number: 2 (lower is better)
Translates to: QVHSRRRLPEFSCSTLGRFESVN*ETETHA
Trigger: AGCGTGGGTCTCTGTCTCCCAGTTCACTGACTCAAA...CCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp CAAGTCCACTCAAGAAGGCGGTTGCCGGAGTTTTCCTGCTCCACCCTGGGGAGGCTGGGCAGATCTGCTTaGCCAGACACATTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: QVHSRRRLPEFSCSTLGRLGRSA*PDTFCF
Trigger: AAAGCAGAATGTGTCTGGCCAAGCAGATCTGCCCAG...CCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGGTGGGGCCATCCTTaGAGCAGTTGTGCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRRWGHP*SSCAGS
Trigger: TGAGCCAGCACAACTGCTCCAAGGATGGCCCCACCT...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CCA 90 bp GCCTGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAAAGTCCTGAGGTGTaGGTCCCCGAAGAGGCCACA +
Preference number: 2 (lower is better)
Translates to: AWQVPSPLIQVQFVFVGVESPEV*VPEEAT
Trigger: TGTGGCCTCTTCGGGGACCCACACCTCAGGACTTTC...CACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CCA 90 bp GTGGAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACCCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: VEHLDILQRVVGGQCEVHPMYLA*ISTCWP
Trigger: AGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGG...GTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR CAA 90 bp TTTGTTCTTCTCTGGGCAGATCTGCTTGGCCAGACACATTCTGCTTaGGCTGAACGGCCTGGAGAGGGCTCCAATTCCTGCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: FVLLWADLLGQTHSA*AERPGEGSNSCWGE
Trigger: CTCTCCCCAGCAGGAATTGGAGCCCTCTCCAGGCCGTTCAGCCAAAGCAGAATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR TCA 90 bp GTGGAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACAGTCCTCCACAGCATTaGCCACTTCCTCTGGCATGC +
Preference number: 2 (lower is better)
Translates to: VEHLDILQRVVGGQCEVHSPPQH*PLPLAC
Trigger: GCATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACT...GTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTCCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR-3UTR GCA 90 bp GTGTCTGAACACGTCTTTGTTCTTCTCTGGGCAGATCTGCTTGGCCAGACACATGACGCCAAGTTTGCCTaGAGCCCGAGCCCAAGTGCC +
Preference number: 2 (lower is better)
Translates to: VSEHVFVLLWADLLGQTHDAKFA*SPSPSA
Trigger: GGCACTTGGGCTCGGGCTGCAGGCAAACTTGGCGTC...ATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp CCAGACTACGACCAGCCACATCGGGGGTGGCCTACAAATGTTTGTGCCAGGAAGGGGTGCTTTGGGGACTaGTGCTTCCCATATTGCCAA +
Preference number: 2 (lower is better)
Translates to: PDYDQPHRGWPTNVCARKGCFGD*CFPYCQ
Trigger: TTGGCAATATGGGAAGCAGCAGTCCCCAAAGCACCC...CTTCCTGGCACAAACATTTGTAGGCCACCCCCGATGTGGCTGGTCGTAGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp TGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGAGGCTGTTGGCCCCGTaGTTGTCCCCACCGTTCTTA +
Preference number: 2 (lower is better)
Translates to: WQVPSPLIQVQFVFVGVERLLAP*LSPPFL
Trigger: TAAGAACGGTGGGGACAAGCACGGGGCCAACAGCCT...CTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGGTCCTCTCATACAGGTaGAGTTTGTCTTTGTTGGAG +
Preference number: 2 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGVLSYR*SLSLLE
Trigger: CTCCAACAAAGACAAACTGCACCTGTATGAGAGGAC...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CCA 90 bp CCGTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGCACTGGCAGGGAGGGTaGCAGGCAGTCCCAACAGCT +
Preference number: 2 (lower is better)
Translates to: PSCKMKLLLGNLLAQDAVHWQGG*QAVPTA
Trigger: AGCTGTTGGGACTGCCTGCCACCCTCCCTGCCAGTG...CACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp TCTGGAGCCCGGGCCCTTCCTTCGGTCTGGGTGTGTCTGTGCCCATGCCACTGTTTATACTTTCAGTTATaGGGTACACGTGCAGAACGC +
Preference number: 2 (lower is better)
Translates to: SGARALPSVWVCLCPCHCLYFQL*GTRAER
Trigger: GCGTTCTGCACGTGTACCCCATAACTGAAAGTATAA...ACAGTGGCATGGGCACAGACACACCCAGACCGAAGGAAGGGCCCGGGCTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 90 bp CATCGTTTCCTTGACGGGGTGCTTTGGGGACTGCTGCTTCCCATATaGCCAACTGCCTTATGTCCTTTACAGTCCTGCGGTCAGCATGGC +
Preference number: 2 (lower is better)
Translates to: HRFLDGVLWGLLLPI*PTALCPLQSCGQHG
Trigger: GCCATGCTGACCGCAGGACTGTAAAGGACATAAGGCAGTTGGCAATATGGGAAGCAGCAGTCCCCAAAGCACCCCGTCAAGGAAACGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR TCA 90 bp TGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGGCACAGGCGTGTTGGTaGCCTGCACGTTCAGGTAAT +
Preference number: 2 (lower is better)
Translates to: WQVPSPLIQVQFVFVGVEAQACW*PARSGN
Trigger: ATTACCTGAACGTGCAGGTCACCAACACGCCTGTGC...CTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR GCA 90 bp GCCTCAAGGGAGCCAAAGTCTGTTCAGAAAACAAACTCCAACACGTCTAAAAGACGGTCCCTGGCGTTCTaGGGGGCCATGGTGGACACG +
Preference number: 2 (lower is better)
Translates to: ASREPKSVQKTNSNTSKRRSLAF*GAMVDT
Trigger: CGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCG...TCTTTTAGACGTGTTGGAGTTTGTTTTCTGAACAGACTTTGGCTCCCTTGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp GCCTCAAGGGAGCCAAAGTCTGTTCAGAAAACAAACTCCAACACGTCTAAAAGACCCAGACTCCAGACGTaGATGGACCGGGCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: ASREPKSVQKTNSNTSKRPRLQT*MDRAGG
Trigger: GCCCCCAGCCCGGTCCATCCACGTCTGGAGTCTGGG...TCTTTTAGACGTGTTGGAGTTTGTTTTCTGAACAGACTTTGGCTCCCTTGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp CCAGACTACGACCAGCCACATCGGGGGTGGCCTACAAATGTTTGTGCCAGGAAGGGTATACACGTGCCATaGTGGTTTGCTGCACCTATG +
Preference number: 2 (lower is better)
Translates to: PDYDQPHRGWPTNVCARKGIHVP*WFAAPM
Trigger: CATAGGTGCAGCAAACCACCATGGCACGTGTATACC...CTTCCTGGCACAAACATTTGTAGGCCACCCCCGATGTGGCTGGTCGTAGTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp TGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGTGGATCTCCACGTGCTaGCCTGACACCTTCTCAGTG +
Preference number: 2 (lower is better)
Translates to: WQVPSPLIQVQFVFVGVEWISTC*PDTFSV
Trigger: CACTGAGAAGGTGTCAGGCCAGCACGTGGAGATCCA...CTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR-3UTR CCA 90 bp TGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGCCCTCAGCATTGGTGTaGAAGGCCTGGAAGTCGATC +
Preference number: 2 (lower is better)
Translates to: WQVPSPLIQVQFVFVGVEPSALV*KAWKSI
Trigger: GATCGACTTCCAGGCCTTCCACACCAATGCTGAGGG...CTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR CAA 90 bp AGACAGTGTCTGAACACGTCTTTGTTCTTCTCTGGGCAGATCTGCTaGGCCAGACACATTCTGCTTTGGCTGAACGGCCTGGAGAGGGCT +
Preference number: 2 (lower is better)
Translates to: RQCLNTSLFFSGQIC*ARHILLWLNGLERA
Trigger: AGCCCTCTCCAGGCCGTTCAGCCAAAGCAGAATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACACTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGTACTGTCAAACATCATaGCACCAGTCACCACAACCT +
Preference number: 2 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVYCQTS*HQSPQP
Trigger: AGGTTGTGGTGACTGGTGCCATGATGTTTGACAGTA...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp TCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGCATCTTGGCGTGTAGTTGGGGGTaGCCGAGTGCTTGTGAAAGC +
Preference number: 2 (lower is better)
Translates to: SRVLSYRCSLSLLEWSILACSWG*PSACES
Trigger: GCTTTCACAAGCACTCGGCCACCCCCAACTACACGC...CAAGATGCTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR TCA 90 bp CCAGACTACGACCAGCCACATCGGGGGTGGCCTACAAATGTTTGTGCCAGGAAGTTTCTGGACCATACCTaGGATTTGCACACAGGAAAG +
Preference number: 2 (lower is better)
Translates to: PDYDQPHRGWPTNVCARKFLDHT*DLHTGK
Trigger: CTTTCCTGTGTGCAAATCTCAGGTATGGTCCAGAAA...CTTCCTGGCACAAACATTTGTAGGCCACCCCCGATGTGGCTGGTCGTAGTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACCCAGACTCCAGACGTaGATGGACCGGGCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRPRLQT*MDRAGG
Trigger: GCCCCCAGCCCGGTCCATCCACGTCTGGAGTCTGGG...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGTTCTTCCTGATTCACTaGGTAGTTTGTACAGATGAA +
Preference number: 2 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGFFLIH*VVCTDE
Trigger: TTCATCTGTACAAACTACCCAGTGAATCAGGAAGAA...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR TCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGAGCTCCGCCCGGGCTATaGGAAGATGGGCACTGGCAG +
Preference number: 2 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRAPPGL*EDGHWQ
Trigger: CTGCCAGTGCCCATCTTCTCATAGCCCGGGCGGAGC...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR TCA 90 bp CCAGACTACGACCAGCCACATCGGGGGTGGCCTACAAATGTTTGTGCCAGGAAGAGCAATTTACAGGAATaGACTCCTGACTCTCCAAAC +
Preference number: 2 (lower is better)
Translates to: PDYDQPHRGWPTNVCARKSNLQE*TPDSPN
Trigger: GTTTGGAGAGTCAGGAGTTCATTCCTGTAAATTGCT...CTTCCTGGCACAAACATTTGTAGGCCACCCCCGATGTGGCTGGTCGTAGTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGAACACGCCAGGAGATCTaGACCCCGTGGGCGGTCCCA +
Preference number: 2 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRTRQEI*TPWAVP
Trigger: TGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR GCA 90 bp GTGTCTGAACACGTCTTTGTTCTTCTCTGGGCAGATCTGCTTGGCCAGACACATCCTGGTCTGTCCACTTaGTACTGTCCAGTGACAGTG +
Preference number: 2 (lower is better)
Translates to: VSEHVFVLLWADLLGQTHPGLST*YCPVTV
Trigger: CACTGTCACTGGACAGTAGCAAGTGGACAGACCAGG...ATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 90 bp AAATCCAGACTACGACCAGCCACATCGGGGGTGGCCTACAAATGTTaGTGCCAGGAAGGAAGGGAAGAAGGACTCCTCTTGTTTTATGCA +
Preference number: 2 (lower is better)
Translates to: KSRLRPATSGVAYKC*CQEGREEGLLLFYA
Trigger: TGCATAAAACAAGAGGAGTCCTTCTTCCCTTCCTTCCTGGCACAAACATTTGTAGGCCACCCCCGATGTGGCTGGTCGTAGTCTGGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 90 bp ATGTGGAGGGCGGAGGATTCCAGCAAGACCAATTTAGCAGGACTCTaGCTAAAACCGAACAATCCAGAGACAAACACGGAAGCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: MWRAEDSSKTNLAGL*LKPNNPETNTEAQS
Trigger: GCTTTGGGCTTCCGTGTTTGTCTCTGGATTGTTCGGTTTTAGCAAGAGTCCTGCTAAATTGGTCTTGCTGGAATCCTCCGCCCTCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp GTGTCTGAACACGTCTTTGTTCTTCTCTGGGCAGATCTGCTTGGCCAGACACATCTTCCCTTTTCTCTGTaGAGCTCGTTACCATGGGAC +
Preference number: 2 (lower is better)
Translates to: VSEHVFVLLWADLLGQTHLPFSL*SSLPWD
Trigger: GTCCCATGGTAACGAGCTCCACAGAGAAAAGGGAAG...ATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR TCA 90 bp CTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGTTCCACTGCACTTTTGGGAGTaGAGCCTGGCTTTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: LQDEAASWESFSSGCCVPLHFWE*SLALCC
Trigger: ACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAG...TGGAACACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp CCGTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGTGGTGGCTGTTAAACTaGTGCATCTTCTATCCGCCT +
Preference number: 2 (lower is better)
Translates to: PSCKMKLLLGNLLAQDAVWWLLN*CIFYPP
Trigger: AGGCGGATAGAAGATGCAGCAGTTTAACAGCCACCA...CACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp CTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGTTCCAAGAGGTGAAGTGACTTaGCCATGGTCACACTGCTGG +
Preference number: 2 (lower is better)
Translates to: LQDEAASWESFSSGCCVPRGEVT*PWSHCW
Trigger: CCAGCAGTGTGACCATGGGCAAGTCACTTCACCTCT...TGGAACACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR GCA 90 bp CCATGGGACCCTGGGTTTTGTAACTGTGGTTTATTGCCTTGTCTTTCCAATAAGTTCCAGTCTGGTTCCTaGCTCCCAAACCCAACTCCC +
Preference number: 2 (lower is better)
Translates to: PWDPGFCNCGLLPCLSNKFQSGS*LPNPTP
Trigger: GGGAGTTGGGTTTGGGAGGCAGGAACCAGACTGGAA...CTTATTGGAAAGACAAGGCAATAAACCACAGTTACAAAACCCAGGGTCCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACGGGCTATGAGAAGATaGGCACTGGCAGGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRRAMRR*ALAGRV
Trigger: CACCCTCCCTGCCAGTGCCCATCTTCTCATAGCCCG...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp CCGTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGTTCTTCTGTGTGCCCTaGCTTCTCAGGAACTGTTCT +
Preference number: 2 (lower is better)
Translates to: PSCKMKLLLGNLLAQDAVFFCVP*LLRNCS
Trigger: AGAACAGTTCCTGAGAAGCCAGGGCACACAGAAGAA...CACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACGTTCTGCAGCCTCCTaGCCAGTGTATGAGAGGTCC +
Preference number: 2 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRRSAAS*PVYERS
Trigger: GGACCTCTCATACACTGGCCAGGAGGCTGCAGAACG...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR GCA 90 bp CCATGGGACCCTGGGTTTTGTAACTGTGGTTTATTGCCTTGTCTTTCCAATAAGTTCCAGAGAACAGCATaGAGGCTCAGAGAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: PWDPGFCNCGLLPCLSNKFQRTA*RLREVK
Trigger: CTTCACCTCTCTGAGCCTGCATGCTGTTCTCTGGAA...CTTATTGGAAAGACAAGGCAATAAACCACAGTTACAAAACCCAGGGTCCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CCA 90 bp GTGTCTGAACACGTCTTTGTTCTTCTCTGGGCAGATCTGCTTGGCCAGACACATAAGTTCTTCAGCTTTTaGACTCTTGGACTTACACTG +
Preference number: 2 (lower is better)
Translates to: VSEHVFVLLWADLLGQTHKFFSF*TLGLTL
Trigger: CAGTGTAAGTCCAAGAGTCCAAAAGCTGAAGAACTT...ATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 90 bp ACTCCATGGCGTATATGTGCCACATTTTCTTTATCCAGTCTATCATaGAGCCCATTATTTCTGATAATCGCTGCATTGCCACTGCCTCAG +
Preference number: 2 (lower is better)
Translates to: TPWRICATFSLSSLS*SPLFLIIAALPLPQ
Trigger: CTGAGGCAGTGGCAATGCAGCGATTATCAGAAATAATGGGCTCAATGATAGACTGGATAAAGAAAATGTGGCACATATACGCCATGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR TCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGATGTACAGATGAAATGTaGTCACAGCTGCCAATAAAC +
Preference number: 2 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRCTDEM*SQLPIN
Trigger: GTTTATTGGCAGCTGTGATCACATTTCATCTGTACA...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GGGGCTGTCCGAGCGCTCCTGGCTGTCTCCGGCCGGTaGGAGCGTGCGCAGGCGTGGCTGCGAGGTGGGGCC +
Preference number: 3 (lower is better)
Translates to: GAVRALLAVSGR*ERAQAWLRGGA
Trigger: GGCCCCACCTCGCAGCCACGCCTGCGCACGCTCCCACCGGCCGGAGACAGCCAGGAGCGCTCGGACAGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR GCA 72 bp GGACGGCCGAGTGGTAGGCCAGGTCACCCCGGCAGGTaGGGGCCGTCCGCCGCGTGCACAGGGCGTAGCTGC +
Preference number: 3 (lower is better)
Translates to: GRPSGRPGHPGR*GPSAACTGRSC
Trigger: GCAGCTACGCCCTGTGCACGCGGCGGACGGCCCGCACCTGCCGGGGTGACCTGGCCTACCACTCGGCCGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR CCA 72 bp GCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTaGACACGCCAGGAGATCTGCACCCCGTGGGCGGTC +
Preference number: 3 (lower is better)
Translates to: AAGGPWRSAGPW*TRQEICTPWAV
Trigger: GACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
3UTR CCA 72 bp GGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTaGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAG +
Preference number: 3 (lower is better)
Translates to: GSVPEPLAAGGP*RSAGPWWTRQE
Trigger: CTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
3UTR CCA 72 bp GCCCCGAGCGCCCTCCCACCCGCCCACACACGGTTCTaGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGA +
Preference number: 3 (lower is better)
Translates to: APSALPPAHTRF*QREQDLLEGGG
Trigger: TCCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGGAGGGCGCTCGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR GCA 72 bp AGGTGCGGGCCGTCCGCCGCGTGCACAGGGCGTAGCTaGGCAAGGCTGCACAGAACTCGGGGGTGTCGTCTG +
Preference number: 3 (lower is better)
Translates to: RCGPSAACTGRS*ARLHRTRGCRL
Trigger: CAGACGACACCCCCGAGTTCTGTGCAGCCTTGCGCAGCTACGCCCTGTGCACGCGGCGGACGGCCCGCACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR GCA 72 bp CTGTCTCCGGCCGGTGGGAGCGTGCGCAGGCGTGGCTaGGAGGTGGGGCCATCCTTGGAGCAGTTGTGCTGG +
Preference number: 3 (lower is better)
Translates to: LSPAGGSVRRRG*EVGPSLEQLCW
Trigger: CCAGCACAACTGCTCCAAGGATGGCCCCACCTCGCAGCCACGCCTGCGCACGCTCCCACCGGCCGGAGACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR CCA 72 bp TTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATaGTGGACACGCCAGGAGATCTGCACCCCGTGGGCG +
Preference number: 3 (lower is better)
Translates to: LAAGGPWRSAGP*WTRQEICTPWA
Trigger: CGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
3UTR CCA 72 bp CTGGCTGTCTCCGGCCGGTGGGAGCGTGCGCAGGCGTaGCTGCGAGGTGGGGCCATCCTTGGAGCAGTTGTG +
Preference number: 3 (lower is better)
Translates to: LAVSGRWERAQA*LRGGAILGAVV
Trigger: CACAACTGCTCCAAGGATGGCCCCACCTCGCAGCCACGCCTGCGCACGCTCCCACCGGCCGGAGACAGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CAA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGCAGGCGCCCTGCACCTaGCAGGTCTGGAAGCGGTCG +
Preference number: 3 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRQAPCT*QVWKRS
Trigger: CGACCGCTTCCAGACCTGCAAGGTGCAGGGCGCCTG...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CAA 90 bp GCAGCCCCGCAGCCGCCCTGCCTGGCAGGTCCCGAGTCCTCTCATACAGGTGCACCTGCCCAGGAGCTCTaGCATCTGCAGGAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: AAPQPPCLAGPESSHTGAPAQEL*HLQERE
Trigger: CTCTCTCTCCTGCAGATGCAAGAGCTCCTGGGCAGG...TGCACCTGTATGAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCGGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR TCA 72 bp CCCATGCCACTGTCCATCCCTGGCCATCCAGGCCCGTaGAACACAAGGTCCCTCCCCCTAGGCCAGGGCGTG +
Preference number: 3 (lower is better)
Translates to: PMPLSIPGHPGP*NTRSLPLGQGV
Trigger: CACGCCCTGGCCTAGGGGGAGGGACCTTGTGTTTCACGGGCCTGGATGGCCAGGGATGGACAGTGGCATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp CTGCAGCACCACTGCTCCGCCCGGGCTATGAGAAGATaGGCACTGGCAGGGAGGGTGGCAGGCAGTCCCAAC +
Preference number: 3 (lower is better)
Translates to: LQHHCSARAMRR*ALAGRVAGSPN
Trigger: GTTGGGACTGCCTGCCACCCTCCCTGCCAGTGCCCATCTTCTCATAGCCCGGGCGGAGCAGTGGTGCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GCCCTCAAGCGAGGAGTAGGTGGGCGCAGTGAGCGGTaGGGTGGACGCGTGCTCTCCTACCAGACCCTGCTT +
Preference number: 3 (lower is better)
Translates to: ALKRGVGGRSER*GGRVLSYQTLL
Trigger: AAGCAGGGTCTGGTAGGAGAGCACGCGTCCACCCCACCGCTCACTGCGCCCACCTACTCCTCGCTTGAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GCACAGAACTCGGGGGTGTCGTCTGAGGCTGGGGCGTaGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTTG +
Preference number: 3 (lower is better)
Translates to: AQNSGVSSEAGA*LPDVALQNSEL
Trigger: CAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGCCCCAGCCTCAGACGACACCCCCGAGTTCTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR GCA 72 bp TCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTaGGAGGGGGAAGGAGCTGACTCTGACGGTTCCCAG +
Preference number: 3 (lower is better)
Translates to: SASSSRPGLSVH*EGEGADSDGSQ
Trigger: CTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR GCA 72 bp CGGGCCCTTCCTTCGGTCTGGGTGTGTCTGTGCCCATaGCACTGTCCATCCCTGGCCATCCAGGCCCGTGAA +
Preference number: 3 (lower is better)
Translates to: RALPSVWVCLCP*HCPSLAIQARE
Trigger: TTCACGGGCCTGGATGGCCAGGGATGGACAGTGGCATGGGCACAGACACACCCAGACCGAAGGAAGGGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp CAGCGGCCCTGCTCATCAAACCGCTCTGATGGAGCCTaGCTGCCCTTTGAGCCCCTCCTCAGTCAGCCTCCC +
Preference number: 3 (lower is better)
Translates to: QRPCSSNRSDGA*LPFEPLLSQPP
Trigger: GGGAGGCTGACTGAGGAGGGGCTCAAAGGGCAGGCAGGCTCCATCAGAGCGGTTTGATGAGCAGGGCCGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp TCAGGTAGCGGCCCACCTGGCGCACCACGATGGTGGTaGCGATGTACTTGGCCTGGATCTCCACGTGCTGGC +
Preference number: 3 (lower is better)
Translates to: SGSGPPGAPRWW*RCTWPGSPRAG
Trigger: GCCAGCACGTGGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGGCCGCTACCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR CCA 72 bp ATGCATTTACCTCCAGGCCGCAGGCCTCCGCGGAGCTaGCAGCCAGGAACCTCCAGAGGCTCCCAACCTAGC +
Preference number: 3 (lower is better)
Translates to: MHLPPGRRPPRS*QPGTSRGSQPS
Trigger: GCTAGGTTGGGAGCCTCTGGAGGTTCCTGGCTGCCAGCTCCGCGGAGGCCTGCGGCCTGGAGGTAAATGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GGTGACAGAGCTGGGAGCCTGGATCGGGTCTGGTTCTaGAGCCCGGGCCCTTCCTTCGGTCTGGGTGTGTCT +
Preference number: 3 (lower is better)
Translates to: GDRAGSLDRVWF*SPGPSFGLGVS
Trigger: AGACACACCCAGACCGAAGGAAGGGCCCGGGCTCCAGAACCAGACCCGATCCAGGCTCCCAGCTCTGTCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp CCAGTAGGTGACAGAGCTGGGAGCCTGGATCGGGTCTaGTTCTGGAGCCCGGGCCCTTCCTTCGGTCTGGGT +
Preference number: 3 (lower is better)
Translates to: PVGDRAGSLDRV*FWSPGPSFGLG
Trigger: ACCCAGACCGAAGGAAGGGCCCGGGCTCCAGAACCAGACCCGATCCAGGCTCCCAGCTCTGTCACCTACTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CAA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACCAGTCACCACAACCTaGTCACGTGCACTAGAAGGG +
Preference number: 3 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGPVTTT*SRALEG
Trigger: CCCTTCTAGTGCACGTGACAAGGTTGTGGTGACTGG...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CAA 90 bp TTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCAGGGCTGGTGATCTTCAGGCTGTaGGCCCCGTGCTTGTCCCCA +
Preference number: 3 (lower is better)
Translates to: LATAVSYGKVSGAVGAGLVIFRL*APCLSP
Trigger: TGGGGACAAGCACGGGGCCAACAGCCTGAAGATCAC...CAGCCCTGCACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR GCA 72 bp GACGGGCAGCTGAGCAGGTGCCTGAAAACCGGGACCTaGACTGGTACCCACAGCAGCCAGGTGAACATGGGC +
Preference number: 3 (lower is better)
Translates to: DGQLSRCLKTGT*TGTHSSQVNMG
Trigger: GCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGTCCCGGTTTTCAGGCACCTGCTCAGCTGCCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR GCA 72 bp CACAGTGACGTGGACAGCAGCCTCCTGCAGCACCACTaGTCCGCCCGGGCTATGAGAAGATGGGCACTGGCA +
Preference number: 3 (lower is better)
Translates to: HSDVDSSLLQHH*SARAMRRWALA
Trigger: TGCCAGTGCCCATCTTCTCATAGCCCGGGCGGAGCAGTGGTGCTGCAGGAGGCTGCTGTCCACGTCACTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp AAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACAGGTaGGACTGTTCTGGGCCCCTGGATGAGCACCCTGGG +
Preference number: 3 (lower is better)
Translates to: KPGFVLWAQQHR*DCSGPLDEHPG
Trigger: CCCAGGGTGCTCATCCAGGGGCCCAGAACAGTCCCACCTGTGCTGCTGTGCCCACAGCACAAAGCCAGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR CCA 72 bp CCAGAGGACGACAAAGATGGCAGCTCACCATGCACGTaGACCAGAGCCCACTCCATGGCTGGGCGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: PEDDKDGSSPCT*TRAHSMAGRAG
Trigger: CCCAGCTCGCCCAGCCATGGAGTGGGCTCTGGTCCACGTGCATGGTGAGCTGCCATCTTTGTCGTCCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CAA 90 bp CAAGTCCACTCAAGAAGGCGGTTGCCGGAGTTTTCCTGCTCCACCCTGGGGAGGGCAGGGTTGGGGGCCTaGGCTGTGCCGATTCAGAAG +
Preference number: 3 (lower is better)
Translates to: QVHSRRRLPEFSCSTLGRAGLGA*AVPIQK
Trigger: CTTCTGAATCGGCACAGCCAAGGCCCCCAACCCTGC...CCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp TGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTTaGGGATCTTGCACGGGGAGGTGGGTAGGTTGGGGG +
Preference number: 3 (lower is better)
Translates to: CPTWRSRTQSCT*GSCTGRWVGWG
Trigger: CCCCCAACCTACCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR CCA 72 bp TCAAGATGCCCTCTCCCCAGTTCTGGCTGGTCAGCCTaGGAGTATGTCAGGGCAGGGGTGGCGTGGCATGCA +
Preference number: 3 (lower is better)
Translates to: SRCPLPSSGWSA*EYVRAGVAWHA
Trigger: TGCATGCCACGCCACCCCTGCCCTGACATACTCCCAGGCTGACCAGCCAGAACTGGGGAGAGGGCATCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GCTGGGCAGTGGGTGACTGGCAGGAAATGGTCAGCTTaGAGGAACGGTGCCCTCGAGGTGGTCAGTAACGGG +
Preference number: 3 (lower is better)
Translates to: AGQWVTGRKWSA*RNGALEVVSNG
Trigger: CCCGTTACTGACCACCTCGAGGGCACCGTTCCTCCAAGCTGACCATTTCCTGCCAGTCACCCACTGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp CAGAACCAGAGCCCTGGTTTGACTCCGCCCCTGCTGTaGGGCTCACGAGCATGCCTTGAACACAGGCTGCCT +
Preference number: 3 (lower is better)
Translates to: QNQSPGLTPPLL*GSRACLEHRLP
Trigger: AGGCAGCCTGTGTTCAAGGCATGCTCGTGAGCCCCACAGCAGGGGCGGAGTCAAACCAGGGCTCTGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GACTCTGAAGGCCGAGCCTGTCACCACCTCATGCAATaGCTTTCCCTGCGGTCTCCCAAGGGGCTTTGCGCC +
Preference number: 3 (lower is better)
Translates to: DSEGRACHHLMQ*LSLRSPKGLCA
Trigger: GGCGCAAAGCCCCTTGGGAGACCGCAGGGAAAGCCATTGCATGAGGTGGTGACAGGCTCGGCCTTCAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GCAGGTCTGGAAGCGGTCGGTGAAAGTCCTGAGGTGTaGGTCCCCGAAGAGGCCACAGTGCGTGTAGTTGGG +
Preference number: 3 (lower is better)
Translates to: AGLEAVGESPEV*VPEEATVRVVG
Trigger: CCCAACTACACGCACTGTGGCCTCTTCGGGGACCCACACCTCAGGACTTTCACCGACCGCTTCCAGACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR CCA 72 bp CCACCTGGCGCACCACGATGGTGGTGCCGATGTACTTaGCCTGGATCTCCACGTGCTGGCCTGACACCTTCT +
Preference number: 3 (lower is better)
Translates to: PPGAPRWWCRCT*PGSPRAGLTPS
Trigger: AGAAGGTGTCAGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR-3UTR CAA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGCCAGTCACCACAACCTaGTCACGTGCACTAGAAGGG +
Preference number: 3 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGPVTTT*SRALEG
Trigger: CCCTTCTAGTGCACGTGACAAGGTTGTGGTGACTGG...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR-3UTR CAA 90 bp GGAGCGCCCCGCCCCAGCTCGTTCTCTGCCCTCAAGCGAGGAGTAGGTGGGCGCGTCCATGTGTTCTCATaGTTCAACTCCCACTTACGA +
Preference number: 3 (lower is better)
Translates to: GAPRPSSFSALKRGVGGRVHVFS*FNSHLR
Trigger: TCGTAAGTGGGAGTTGAACAATGAGAACACATGGAC...GCGCCCACCTACTCCTCGCTTGAGGGCAGAGAACGAGCTGGGGCGGGGCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CAA 90 bp GGAGCGCCCCGCCCCAGCTCGTTCTCTGCCCTCAAGCGAGGAGTAGGTGGGCGCGCCAACTTGATTGGATaGGAGGATGCAAAGTATCGT +
Preference number: 3 (lower is better)
Translates to: GAPRPSSFSALKRGVGGRANLIG*EDAKYR
Trigger: ACGATACTTTGCATCCTCCAATCCAATCAAGTTGGC...GCGCCCACCTACTCCTCGCTTGAGGGCAGAGAACGAGCTGGGGCGGGGCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CAA 90 bp GCGGCCCACCTGGCGCACCACGATGGTGGTGCCGATGTACTTGGCCTGGATCTCAACTCAGAGTTGCACTaGAGGATCTTGCACGGGGAG +
Preference number: 3 (lower is better)
Translates to: AAHLAHHDGGADVLGLDLNSELH*RILHGE
Trigger: CTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTT...GAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR TCA 72 bp GGATCACCCTCCAGGGCCTGGCTGCACTTTTGGGAGTaGAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACA +
Preference number: 3 (lower is better)
Translates to: GSPSRAWLHFWE*SLALCCGHSST
Trigger: TGTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAGGCCCTGGAGGGTGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR TCA 72 bp CCTGGATCTCCACGTGCTGGCCTGACACCTTCTCAGTaGTCTTCAGGCTGTTGGCCCCGTGCTTGTCCCCAC +
Preference number: 3 (lower is better)
Translates to: PGSPRAGLTPSQ*SSGCWPRACPH
Trigger: GTGGGGACAAGCACGGGGCCAACAGCCTGAAGATCACTGAGAAGGTGTCAGGCCAGCACGTGGAGATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR GCA 72 bp GCGCACACACACATGCGCGCACACACACACACTTGCTaGAGGGGATCCCACCACCAAAGTCCATCCTCCACC +
Preference number: 3 (lower is better)
Translates to: AHTHMRAHTHTC*RGSHHQSPSST
Trigger: GGTGGAGGATGGACTTTGGTGGTGGGATCCCCTGCAGCAAGTGTGTGTGTGTGCGCGCATGTGTGTGTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp CAAGTTTGCCTGCAGCCCGAGCCCAAGTGCCACCCCTaGTCCATGCCACTTGCTGGCACAGCTCTGATGACT +
Preference number: 3 (lower is better)
Translates to: QVCLQPEPKCHP*SMPLAGTALMT
Trigger: AGTCATCAGAGCTGTGCCAGCAAGTGGCATGGAGCAGGGGTGGCACTTGGGCTCGGGCTGCAGGCAAACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp TCTGTGGCCTCACCTGGGACCCCTGGTCTGTCCACTTaGTACTGTCCAGTGACAGTGGCTTCCCACCATCCC +
Preference number: 3 (lower is better)
Translates to: SVASPGTPGLST*YCPVTVASHHP
Trigger: GGGATGGTGGGAAGCCACTGTCACTGGACAGTAGCAAGTGGACAGACCAGGGGTCCCAGGTGAGGCCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp ACTAAGAGCACACGGTGGGCCGGCCGCCGCGCTGCATaGATTACATTTCATCTTCAGGACCGCCACGTGAGG +
Preference number: 3 (lower is better)
Translates to: TKSTRWAGRRAA*ITFHLQDRHVR
Trigger: CCTCACGTGGCGGTCCTGAAGATGAAATGTAATGCATGCAGCGCGGCGGCCGGCCCACCGTGTGCTCTTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp AGCCCGACTCTGAAGGCCGAGCCTGTCACCACCTCATaGAATGGCTTTCCCTGCGGTCTCCCAAGGGGCTTT +
Preference number: 3 (lower is better)
Translates to: SPTLKAEPVTTS*NGFPCGLPRGF
Trigger: AAAGCCCCTTGGGAGACCGCAGGGAAAGCCATTGCATGAGGTGGTGACAGGCTCGGCCTTCAGAGTCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp CCACAGGCCAGAAGGCACCAGGCGGGCACGACCTACTaGCCAAAAGGTTCCAGCAGTCTGCTAAGGTGCCAA +
Preference number: 3 (lower is better)
Translates to: PQARRHQAGTTY*PKGSSSLLRCQ
Trigger: TTGGCACCTTAGCAGACTGCTGGAACCTTTTGGCCAGTAGGTCGTGCCCGCCTGGTGCCTTCTGGCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR CCA 72 bp TTGGAGGGAGGGGGAGACACACGTTCTGCAGCCTCCTaGCCAGTGTATGAGAGGTCCCTGGGGAACAGCAGA +
Preference number: 3 (lower is better)
Translates to: LEGGGDTRSAAS*PVYERSLGNSR
Trigger: TCTGCTGTTCCCCAGGGACCTCTCATACACTGGCCAGGAGGCTGCAGAACGTGTGTCTCCCCCTCCCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR CCA 72 bp CAGGGTTGGGGGCCTTGGCTGTGCCGATTCAGAAGGTaGTGGTTTCCCAGGGGACAATGGGAACTTCCACGG +
Preference number: 3 (lower is better)
Translates to: QGWGPWLCRFRR*WFPRGQWELPR
Trigger: CCGTGGAAGTTCCCATTGTCCCCTGGGAAACCACCACCTTCTGAATCGGCACAGCCAAGGCCCCCAACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GGTGTGGGTCCCCGAAGAGGCCACAGTGCGTGTAGTTaGGGGTGGCCGAGTGCTTGTGAAAGCTCTTCTCGT +
Preference number: 3 (lower is better)
Translates to: GVGPRRGHSACS*GWPSACESSSR
Trigger: ACGAGAAGAGCTTTCACAAGCACTCGGCCACCCCCAACTACACGCACTGTGGCCTCTTCGGGGACCCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR CCA 72 bp TGGCGCACCACGATGGTGGTGCCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCTGACACCTTCTCAGTG +
Preference number: 3 (lower is better)
Translates to: WRTTMVVPMYLA*ISTCWPDTFSV
Trigger: CACTGAGAAGGTGTCAGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR-3UTR CAA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGCCTGCCCAGGAGCTCTaGCATCTGCAGGAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVPAQEL*HLQERE
Trigger: CTCTCTCTCCTGCAGATGCAAGAGCTCCTGGGCAGG...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR TCA 72 bp GGCAGATCTGCTTGGCCAGACACATTCTGCTTTGGCTaGACGGCCTGGAGAGGGCTCCAATTCCTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: GRSAWPDTFCFG*TAWRGLQFLLG
Trigger: CCCCAGCAGGAATTGGAGCCCTCTCCAGGCCGTTCAGCCAAAGCAGAATGTGTCTGGCCAAGCAGATCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp GGTAGAGACCCTGGCTGTCCCAGTCCTCCACAGCATTaGCCACTTCCTCTGGCATGCGGACGGCAAAGGTCA +
Preference number: 3 (lower is better)
Translates to: GRDPGCPSPPQH*PLPLACGRQRS
Trigger: TGACCTTTGCCGTCCGCATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACTGGGACAGCCAGGGTCTCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
3UTR GCA 72 bp CACAGGCATGCATACACACATGCGCGCACACACACATaGGCGCACACACACACACTTGCTGCAGGGGATCCC +
Preference number: 3 (lower is better)
Translates to: HRHAYTHARTHT*AHTHTLAAGDP
Trigger: GGGATCCCCTGCAGCAAGTGTGTGTGTGTGCGCGCATGTGTGTGTGCGCGCATGTGTGTATGCATGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp GGGGCCTGTAGTGACGGTTCCGGCCGCCAGGGAAGATaGTGGGTACGTTTTGTCCTTTCCAGTCTGGTTCCT +
Preference number: 3 (lower is better)
Translates to: GACSDGSGRQGR*WVRFVLSSLVP
Trigger: AGGAACCAGACTGGAAAGGACAAAACGTACCCAGCATCTTCCCTGGCGGCCGGAACCGTCACTACAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp TTCTGTGTGCCCTGGCTTCTCAGGAACTGTTCTCTGTaGCGGACGAGCACCAATGGCTCCGCTCCTCCTTGC +
Preference number: 3 (lower is better)
Translates to: FCVPWLLRNCSL*RTSTNGSAPPC
Trigger: GCAAGGAGGAGCGGAGCCATTGGTGCTCGTCCGGCACAGAGAACAGTTCCTGAGAAGCCAGGGCACACAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp GAGAAAGGGAAGGTCAAGTCCACTCAAGAAGGCGGTTaGCGGAGTTTTCCTGCTCCACCCTGGGGAGGGACC +
Preference number: 3 (lower is better)
Translates to: EKGKVKSTQEGG*RSFPAPPWGGT
Trigger: GGTCCCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTGACCTTCCCTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GCCTGTAGTGACGGTTCCGGCCGCCAGGGAAGATGCTaGGTACGTTTTGTCCTTTCCAGTCTGGTTCCTGCC +
Preference number: 3 (lower is better)
Translates to: ACSDGSGRQGRC*VRFVLSSLVPA
Trigger: GGCAGGAACCAGACTGGAAAGGACAAAACGTACCCAGCATCTTCCCTGGCGGCCGGAACCGTCACTACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp AACTCCAGTTCTCGGCAACACATCAGTGAGACAGGATaGGGCGGGGAGAGGCGCCCACCTCCGTGTGCTAAT +
Preference number: 3 (lower is better)
Translates to: NSSSRQHISETG*GGERRPPPCAN
Trigger: ATTAGCACACGGAGGTGGGCGCCTCTCCCCGCCCCATCCTGTCTCACTGATGTGTTGCCGAGAACTGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp AGAGACAAACACGGAAGCCCAAAGCCCAGGCCTAACTaGAAGGCTCAGGGCGGCCTGAGGAGAGATGGGTCA +
Preference number: 3 (lower is better)
Translates to: RDKHGSPKPRPN*KAQGGLRRDGS
Trigger: TGACCCATCTCTCCTCAGGCCGCCCTGAGCCTTCCAGTTAGGCCTGGGCTTTGGGCTTCCGTGTTTGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GGTCCCCGAAGAGGCCACAGTGCGTGTAGTTGGGGGTaGCCGAGTGCTTGTGAAAGCTCTTCTCGTAATGGC +
Preference number: 3 (lower is better)
Translates to: GPRRGHSACSWG*PSACESSSRNG
Trigger: GCCATTACGAGAAGAGCTTTCACAAGCACTCGGCCACCCCCAACTACACGCACTGTGGCCTCTTCGGGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR-3UTR CAA 90 bp GTGCCCTCGAGGTGGTCAGTAACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACTCTTGCATCGTTTCCTaGACGGGGTGCTTTGGGGAC +
Preference number: 3 (lower is better)
Translates to: VPSRWSVTGGLKRTAASYSCIVS*TGCFGD
Trigger: GTCCCCAAAGCACCCCGTCAAGGAAACGATGCAAGA...GTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTTACTGACCACCTCGAGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CAA 90 bp ATTGGTGTGGAAGGCCTGGAAGTCGATCTGCTGGTTGAGGGGGCAGCCCCGCAGCTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCAC +
Preference number: 3 (lower is better)
Translates to: IGVEGLEVDLLVEGAAPQLQNSE*HLRILH
Trigger: GTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAG...CTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCACACCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR GCA 72 bp ACTTGGCCACTCTTGGGACTCCTCCCCTTGCTAGCCTaGAGGTTCACCTCTCCCAAGAGTCCAGGGTCTGTA +
Preference number: 3 (lower is better)
Translates to: TWPLLGLLPLLA*RFTSPKSPGSV
Trigger: TACAGACCCTGGACTCTTGGGAGAGGTGAACCTGCAGGCTAGCAAGGGGAGGAGTCCCAAGAGTGGCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp ATGCCACTTGCTGGCACAGCTCTGATGACTGTCTCCTaGCTGGCTCTGACGGGTCTCTGCCCAAGTGTTCTG +
Preference number: 3 (lower is better)
Translates to: MPLAGTALMTVS*LALTGLCPSVL
Trigger: CAGAACACTTGGGCAGAGACCCGTCAGAGCCAGGCAGGAGACAGTCATCAGAGCTGTGCCAGCAAGTGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp CCCATATTGCCAACTGCCTTATGTCCTTTACAGTCCTaGGGTCAGCATGGCCCCGAGCCAGCTCACCAGGGT +
Preference number: 3 (lower is better)
Translates to: PILPTALCPLQS*GQHGPEPAHQG
Trigger: ACCCTGGTGAGCTGGCTCGGGGCCATGCTGACCGCAGGACTGTAAAGGACATAAGGCAGTTGGCAATATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp AAATGGCACCACCATTTCCCCAGGTGCTCAGACCCCTaGGGAAGACATCGTGGTCTCCTGTCAAGCTCGCTC +
Preference number: 3 (lower is better)
Translates to: KWHHHFPRCSDP*GRHRGLLSSSL
Trigger: GAGCGAGCTTGACAGGAGACCACGATGTCTTCCCCAGGGGTCTGAGCACCTGGGGAAATGGTGGTGCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GGTTGGGGGCCTTGGCTGTGCCGATTCAGAAGGTGGTaGTTTCCCAGGGGACAATGGGAACTTCCACGGAAT +
Preference number: 3 (lower is better)
Translates to: GWGPWLCRFRRW*FPRGQWELPRN
Trigger: ATTCCGTGGAAGTTCCCATTGTCCCCTGGGAAACCACCACCTTCTGAATCGGCACAGCCAAGGCCCCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GATGCTGGGCGACATGAATGTTTTCGCCTTGGGATCTaGGCTGCCTGGGATCACAGCCCTCATTCCGGAACG +
Preference number: 3 (lower is better)
Translates to: DAGRHECFRLGI*AAWDHSPHSGT
Trigger: CGTTCCGGAATGAGGGCTGTGATCCCAGGCAGCCCAGATCCCAAGGCGAAAACATTCATGTCGCCCAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp AAGGAGGTAGACGTGGTGTCCAGAGGACGACAAAGATaGCAGCTCACCATGCACGTGGACCAGAGCCCACTC +
Preference number: 3 (lower is better)
Translates to: KEVDVVSRGRQR*QLTMHVDQSPL
Trigger: GAGTGGGCTCTGGTCCACGTGCATGGTGAGCTGCCATCTTTGTCGTCCTCTGGACACCACGTCTACCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CAA 90 bp ACTGGAGTCAAACATCAAGTCCTCCCGGAGCCGGAGAGCCCTGCAGTACTTTGGCCAGTCACCACAACCTaGTCACGTGCACTAGAAGGG +
Preference number: 3 (lower is better)
Translates to: TGVKHQVLPEPESPAVLWPVTTT*SRALEG
Trigger: CCCTTCTAGTGCACGTGACAAGGTTGTGGTGACTGG...CCAAAGTACTGCAGGGCTCTCCGGCTCCGGGAGGACTTGATGTTTGACTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp AAAAATCCCAAGGAGACCACACAGCTCGCGACGGGTTaGGCCAGTTTTGACGCCAAGTTTGCCTGCAGCCCG +
Preference number: 3 (lower is better)
Translates to: KNPKETTQLATG*ASFDAKFACSP
Trigger: CGGGCTGCAGGCAAACTTGGCGTCAAAACTGGCTCAACCCGTCGCGAGCTGTGTGGTCTCCTTGGGATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp GGGTCCCCTCTGAATACAGTACAGGCAAGTGGGAATTaGTGGCCAAGGAGCAGGGTGGGCTCAGTGGATGGA +
Preference number: 3 (lower is better)
Translates to: GSPLNTVQASGN*WPRSRVGSVDG
Trigger: TCCATCCACTGAGCCCACCCTGCTCCTTGGCCATCAATTCCCACTTGCCTGTACTGTATTCAGAGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp GGAGCAGGTTTGAGTTCAGATGTGGAAGAATCCAAGTaGCGTCTCAGGGTCACCCTGGGCAAGGACAGGGTG +
Preference number: 3 (lower is better)
Translates to: GAGLSSDVEESK*RLRVTLGKDRV
Trigger: CACCCTGTCCTTGCCCAGGGTGACCCTGAGACGGCACTTGGATTCTTCCACATCTGAACTCAAACCTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp CGACATGAATGTTTTCGCCTTGGGATCTGGGCTGCCTaGGATCACAGCCCTCATTCCGGAACGCCACTGACA +
Preference number: 3 (lower is better)
Translates to: RHECFRLGIWAA*DHSPHSGTPLT
Trigger: TGTCAGTGGCGTTCCGGAATGAGGGCTGTGATCCCAGGCAGCCCAGATCCCAAGGCGAAAACATTCATGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp TCTGGGCAGATCTGCTTGGCCAGACACATTCTGCTTTaGCTGAACGGCCTGGAGAGGGCTCCAATTCCTGCT +
Preference number: 3 (lower is better)
Translates to: SGQICLARHILL*LNGLERAPIPA
Trigger: AGCAGGAATTGGAGCCCTCTCCAGGCCGTTCAGCCAAAGCAGAATGTGTCTGGCCAAGCAGATCTGCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp CCCCCAAATCCAGACTACGACCAGCCACATCGGGGGTaGCCTACAAATGTTTGTGCCAGGAAGGAAGGGAAG +
Preference number: 3 (lower is better)
Translates to: PPNPDYDQPHRG*PTNVCARKEGK
Trigger: CTTCCCTTCCTTCCTGGCACAAACATTTGTAGGCCACCCCCGATGTGGCTGGTCGTAGTCTGGATTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CAA 90 bp TTTGTTGGAGTGGAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTTTGCACTTGAGGATCTaGCACGGGGAGGTGGGTAGG +
Preference number: 3 (lower is better)
Translates to: FVGVEHLDILQRVVGGQCLHLRI*HGEVGR
Trigger: CCTACCCACCTCCCCGTGCAAGATCCTCAAGTGCAA...ACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTCCACTCCAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR TCA 72 bp GCTGGTCCAGTGGACAGAGCTCTTGCATCGTTTCCTTaGCGGGGTGCTTTGGGGACTGCTGCTTCCCATATT +
Preference number: 3 (lower is better)
Translates to: AGPVDRALASFP*RGALGTAASHI
Trigger: AATATGGGAAGCAGCAGTCCCCAAAGCACCCCGTCAAGGAAACGATGCAAGAGCTCTGTCCACTGGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp ACAAGGAAAACCCACCCTTTTCATGCAGCCAGTAGGTaGCAGAGCTGGGAGCCTGGATCGGGTCTGGTTCTG +
Preference number: 3 (lower is better)
Translates to: TRKTHPFHAASR*QSWEPGSGLVL
Trigger: CAGAACCAGACCCGATCCAGGCTCCCAGCTCTGTCACCTACTGGCTGCATGAAAAGGGTGGGTTTTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp TTGCCAGGGGCTCTCGGGCCTTCAGTGTCCCAAACCTaGTCCTCCCATGATCTTTCCAGTCATGGTAAATGG +
Preference number: 3 (lower is better)
Translates to: LPGALGPSVSQT*SSHDLSSHGKW
Trigger: CCATTTACCATGACTGGAAAGATCATGGGAGGAGCAGGTTTGGGACACTGAAGGCCCGAGAGCCCCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp CGTGCTCTCCTACCAGACCCTGCTTGTAACCTGGAGTaGGTCAGTTGGCTTCTCTTTGCTTCTGTCTGTCCG +
Preference number: 3 (lower is better)
Translates to: RALLPDPACNLE*VSWLLFASVCP
Trigger: CGGACAGACAGAAGCAAAGAGAAGCCAACTGACCCACTCCAGGTTACAAGCAGGGTCTGGTAGGAGAGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GGACGCGTGCTCTCCTACCAGACCCTGCTTGTAACCTaGAGTGGGTCAGTTGGCTTCTCTTTGCTTCTGTCT +
Preference number: 3 (lower is better)
Translates to: GRVLSYQTLLVT*SGSVGFSLLLS
Trigger: AGACAGAAGCAAAGAGAAGCCAACTGACCCACTCCAGGTTACAAGCAGGGTCTGGTAGGAGAGCACGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GAGATTGGGGTCCCCTCTGAATACAGTACAGGCAAGTaGGAATTGATGGCCAAGGAGCAGGGTGGGCTCAGT +
Preference number: 3 (lower is better)
Translates to: EIGVPSEYSTGK*ELMAKEQGGLS
Trigger: ACTGAGCCCACCCTGCTCCTTGGCCATCAATTCCCACTTGCCTGTACTGTATTCAGAGGGGACCCCAATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp GCCGGGAGCTCGTCCATCTCAGCCTGGTACACCTTCTaGTCCACACACTCCTGGAAGTTCTTGAAGATGATG +
Preference number: 3 (lower is better)
Translates to: AGSSSISAWYTF*STHSWKFLKMM
Trigger: CATCATCTTCAAGAACTTCCAGGAGTGTGTGGACCAGAAGGTGTACCAGGCTGAGATGGACGAGCTCCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR TCA 72 bp ACCGCTGCAGCTGGGAAGAGAGATTGGGGTCCCCTCTaGATACAGTACAGGCAAGTGGGAATTGATGGCCAA +
Preference number: 3 (lower is better)
Translates to: TAAAGKRDWGPL*IQYRQVGIDGQ
Trigger: TTGGCCATCAATTCCCACTTGCCTGTACTGTATTCAGAGGGGACCCCAATCTCTCTTCCCAGCTGCAGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp CCAGGAACCTCCAGAGGCTCCCAACCTAGCCCGTCCTaGAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCT +
Preference number: 3 (lower is better)
Translates to: PGTSRGSQPSPS*KMKLLLGNLLA
Trigger: AGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGGGCTAGGTTGGGAGCCTCTGGAGGTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp AGGGAAGATGCTGGGTACGTTTTGTCCTTTCCAGTCTaGTTCCTGCCTCCCAAACCCAACTCCCGTGTTCTC +
Preference number: 3 (lower is better)
Translates to: REDAGYVLSFPV*FLPPKPNSRVL
Trigger: GAGAACACGGGAGTTGGGTTTGGGAGGCAGGAACCAGACTGGAAAGGACAAAACGTACCCAGCATCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp TCTCTCGGAACCTCTGGCCCACTTCCCTTTTCTCTGTaGAGCTCGTTACCATGGGACCCTGGGTTTTGTAAC +
Preference number: 3 (lower is better)
Translates to: SLGTSGPLPFSL*SSLPWDPGFCN
Trigger: GTTACAAAACCCAGGGTCCCATGGTAACGAGCTCCACAGAGAAAAGGGAAGTGGGCCAGAGGTTCCGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp TCATTCCTACACTCAAAGCCCGTGAACGGCTTCCTCTaGCAACTGGAGTCAAACATCAAGTCCTCCCGGAGC +
Preference number: 3 (lower is better)
Translates to: SFLHSKPVNGFL*QLESNIKSSRS
Trigger: GCTCCGGGAGGACTTGATGTTTGACTCCAGTTGCCAGAGGAAGCCGTTCACGGGCTTTGAGTGTAGGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp TGCCGATTCAGAAGGTGGTGGTTTCCCAGGGGACAATaGGAACTTCCACGGAATGAGGTCTGTAGACTCCTG +
Preference number: 3 (lower is better)
Translates to: CRFRRWWFPRGQ*ELPRNEVCRLL
Trigger: CAGGAGTCTACAGACCTCATTCCGTGGAAGTTCCCATTGTCCCCTGGGAAACCACCACCTTCTGAATCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp TCCAATTCCTGCTGGGGAGAGCTGAGGGAGCAGGTTTaGGTTCAGATGTGGAAGAATCCAAGTGCCGTCTCA +
Preference number: 3 (lower is better)
Translates to: SNSCWGELREQV*VQMWKNPSAVS
Trigger: TGAGACGGCACTTGGATTCTTCCACATCTGAACTCAAACCTGCTCCCTCAGCTCTCCCCAGCAGGAATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp CTGACGCTGGCCTTGTTGCACAGATGGAGCTCAGAGTaGGCTCAAAACCAATTCCCCAGACAGTGTCTGAAC +
Preference number: 3 (lower is better)
Translates to: LTLALLHRWSSE*AQNQFPRQCLN
Trigger: GTTCAGACACTGTCTGGGGAATTGGTTTTGAGCTCACTCTGAGCTCCATCTGTGCAACAAGGCCAGCGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp TCATCACGGGGCCTCATGACGTATTTGTTGAATGCCTaGATGTGCCCCCAAATCCAGACTACGACCAGCCAC +
Preference number: 3 (lower is better)
Translates to: SSRGLMTYLLNA*MCPQIQTTTSH
Trigger: GTGGCTGGTCGTAGTCTGGATTTGGGGGCACATTCAGGCATTCAACAAATACGTCATGAGGCCCCGTGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp CCAGGAAGGAAGGGAAGAAGGACTCCTCTTGTTTTATaGAACCAACACCCACCCTGGGGCACTTGCCTTAAG +
Preference number: 3 (lower is better)
Translates to: PGRKGRRTPLVL*NQHPPWGTCLK
Trigger: CTTAAGGCAAGTGCCCCAGGGTGGGTGTTGGTTGCATAAAACAAGAGGAGTCCTTCTTCCCTTCCTTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp CAGCTCATCACGGGGCCTCATGACGTATTTGTTGAATaGCTGAATGTGCCCCCAAATCCAGACTACGACCAG +
Preference number: 3 (lower is better)
Translates to: QLITGPHDVFVE*LNVPPNPDYDQ
Trigger: CTGGTCGTAGTCTGGATTTGGGGGCACATTCAGGCATTCAACAAATACGTCATGAGGCCCCGTGATGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp ACAGAGCTCTTGCATCGTTTCCTTGACGGGGTGCTTTaGGGACTGCTGCTTCCCATATTGCCAACTGCCTTA +
Preference number: 3 (lower is better)
Translates to: TELLHRFLDGVL*GLLLPILPTAL
Trigger: TAAGGCAGTTGGCAATATGGGAAGCAGCAGTCCCCAAAGCACCCCGTCAAGGAAACGATGCAAGAGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp CTGTGTTCCATATTCACGACGGCATTTCCATGCTCGTaGGGGCAACCAGTAGTAAGTAGCATGGCACTTGGG +
Preference number: 3 (lower is better)
Translates to: LCSIFTTAFPCS*GQPVVSSMALG
Trigger: CCCAAGTGCCATGCTACTTACTACTGGTTGCCCTCACGAGCATGGAAATGCCGTCGTGAATATGGAACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp CCAAGTCGGACACATCATTCCTACACTCAAAGCCCGTaGACGGCTTCCTCTGGCAACTGGAGTCAAACATCA +
Preference number: 3 (lower is better)
Translates to: PSRTHHSYTQSP*TASSGNWSQTS
Trigger: TGATGTTTGACTCCAGTTGCCAGAGGAAGCCGTTCACGGGCTTTGAGTGTAGGAATGATGTGTCCGACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp GTAATAAACTGCCACAAGCCCCTTCTCTGTAACAGCTaGCGCTGGCCTTGTTGCACAGATGGAGCTCAGAGT +
Preference number: 3 (lower is better)
Translates to: VINCHKPLLCNS*RWPCCTDGAQS
Trigger: ACTCTGAGCTCCATCTGTGCAACAAGGCCAGCGTCAGCTGTTACAGAGAAGGGGCTTGTGGCAGTTTATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp TTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTaGTCTAGGGCTGTTACACTGTTTTCTCTGCACAGA +
Preference number: 3 (lower is better)
Translates to: FPPSLKLPLCCC*SRAVTLFSLHR
Trigger: TCTGTGCAGAGAAAACAGTGTAACAGCCCTAGAGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp TGCATCGTTTCCTTGACGGGGTGCTTTGGGGACTGCTaGTTCCCATATTGCCAACTGCCTTATGTCCTTTAC +
Preference number: 3 (lower is better)
Translates to: CIVSLTGCFGDC*FPYCQLPYVLY
Trigger: GTAAAGGACATAAGGCAGTTGGCAATATGGGAAGCAGCAGTCCCCAAAGCACCCCGTCAAGGAAACGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp CCCCAGACAGTGTCTGAACACGTCTTTGTTCTTCTCTaGGCAGATCTGCTTGGCCAGACACATTCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: PQTVSEHVFVLL*ADLLGQTHSAL
Trigger: CAAAGCAGAATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACACTGTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp TACAGGCAAGTGGGAATTGATGGCCAAGGAGCAGGGTaGGCTCAGTGGATGGAAAACCTCTTAAGAGGAAAC +
Preference number: 3 (lower is better)
Translates to: YRQVGIDGQGAG*AQWMENLLRGN
Trigger: GTTTCCTCTTAAGAGGTTTTCCATCCACTGAGCCCACCCTGCTCCTTGGCCATCAATTCCCACTTGCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR-3UTR CAA 90 bp GTGTCTGAACACGTCTTTGTTCTTCTCTGGGCAGATCTGCTTGGCCAGACACATGATGCTGGGTACGTTTaGTCCTTTCCAGTCTGGTTC +
Preference number: 3 (lower is better)
Translates to: VSEHVFVLLWADLLGQTHDAGYV*SFPVWF
Trigger: GAACCAGACTGGAAAGGACAAAACGTACCCAGCATC...ATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp CAGAGTGAGCTCAAAACCAATTCCCCAGACAGTGTCTaGACACGTCTTTGTTCTTCTCTGGGCAGATCTGCT +
Preference number: 3 (lower is better)
Translates to: QSELKTNSPDSV*TRLCSSLGRSA
Trigger: AGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACACTGTCTGGGGAATTGGTTTTGAGCTCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp CAGTCTATCATTGAGCCCATTATTTCTGATAATCGCTaGATTGCCACTGCCTCAGACTGGCTCCTGACTTCC +
Preference number: 3 (lower is better)
Translates to: QSIIEPIISDNR*IATASDWLLTS
Trigger: GGAAGTCAGGAGCCAGTCTGAGGCAGTGGCAATGCAGCGATTATCAGAAATAATGGGCTCAATGATAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp CCAAAGAGATGTGATTTCTGGACCATACCTGAGATTTaGACACAGGAAAGTGCAGTCCCTGCCCTTGTGTGT +
Preference number: 3 (lower is better)
Translates to: PKRCDFWTIPEI*TQESAVPALVC
Trigger: ACACACAAGGGCAGGGACTGCACTTTCCTGTGTGCAAATCTCAGGTATGGTCCAGAAATCACATCTCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp TTGGAGGATGCAAAGTATCGTTCCTGGGTGTGTCTGTaGGGCTGTCGCCAAAGGAAATTAACATTTGAGTCA +
Preference number: 3 (lower is better)
Translates to: LEDAKYRSWVCL*GCRQRKLTFES
Trigger: TGACTCAAATGTTAATTTCCTTTGGCGACAGCCTCACAGACACACCCAGGAACGATACTTTGCATCCTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp GATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATaGTGTGTTCCATATTCACGACGGCATTTCCATGCT +
Preference number: 3 (lower is better)
Translates to: DEAASWESFSSG*CVPYSRRHFHA
Trigger: AGCATGGAAATGCCGTCGTGAATATGGAACACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CCA 72 bp CGGCCGAAACTGTTTAATATTGAGTGCCAACTTGATTaGATTGGAGGATGCAAAGTATCGTTCCTGGGTGTG +
Preference number: 3 (lower is better)
Translates to: RPKLFNIECQLD*IGGCKVSFLGV
Trigger: CACACCCAGGAACGATACTTTGCATCCTCCAATCCAATCAAGTTGGCACTCAATATTAAACAGTTTCGGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp TACCATGGGACCCTGGGTTTTGTAACTGTGGTTTATTaGCTTGTCTTTCCAATAAGAATGCACAGCAGTCTG +
Preference number: 3 (lower is better)
Translates to: YHGTLGFVTVVY*LVFPIRMHSSL
Trigger: CAGACTGCTGTGCATTCTTATTGGAAAGACAAGGCAATAAACCACAGTTACAAAACCCAGGGTCCCATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp CCCTGCAAAGGACATGAACTCATCCCTTTTTATGGCTaGATAGTACTCCATGGCGTATATGTGCCACATTTT +
Preference number: 3 (lower is better)
Translates to: PCKGHELIPFYG*IVLHGVYVPHF
Trigger: AAAATGTGGCACATATACGCCATGGAGTACTATGCAGCCATAAAAAGGGATGAGTTCATGTCCTTTGCAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR GCA 72 bp TTTAATATTGAGTGCCAACTTGATTGGATTGGAGGATaGAAAGTATCGTTCCTGGGTGTGTCTGTGAGGCTG +
Preference number: 3 (lower is better)
Translates to: FNIECQLDWIGG*KVSFLGVSVRL
Trigger: CAGCCTCACAGACACACCCAGGAACGATACTTTGCATCCTCCAATCCAATCAAGTTGGCACTCAATATTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR TCA 72 bp GTAAACCAGGGCAATATCTGCTTTCTAGGGTTTTTGTaGAATTTGACAAAGCAATGCAGGACTCGTTTCTAT +
Preference number: 3 (lower is better)
Translates to: VNQGNICFLGFL*NLTKQCRTRFY
Trigger: ATAGAAACGAGTCCTGCATTGCTTTGTCAAATTTCACAAAAACCCTAGAAAGCAGATATTGCCCTGGTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCGGCGCGAGCCGGCGCTaGATCGTCGCCGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLGASRR*IVAVPS
Trigger: GGAGGGCACGGCGACGATTCAGCGCCGGCTCGCGCC...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543599.5
CDS-3UTR GCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGAGGCTGGGGCGTGGCTaGCCGACGTGGCGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPARLGRG*PTWRSR
Trigger: TCTGGAGCGCCACGTCGGGCAGCCACGCCCCAGCCT...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGTGGCGGCTGCCAGCCTaGGGGCACCGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPWRLPA*GHRCPQ
Trigger: CTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGCCA...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCTGCAGGGCTGGCGGCTaGCAGCCTGCGGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLCRAGG*QPAGTG
Trigger: ACCGGTGCCCGCAGGCTGGCAGCCGCCAGCCCTGCA...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCGCAGCCGCCCTGCCTaGCAGGTCCCGAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPARSRPA*QVPSPL
Trigger: GAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCG...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACGCTGCGCCCCCGTGCTaGGGGCCTGCGGGCCTAACC +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHAAPPC*GPAGLT
Trigger: GGTTAGGCCCGCAGGCCCTCAGCACGGGGGCGCAGC...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR GCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCTGCAGGGCTGGCGGCTaGCAGCCTGCGGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRCRAGG*QPAGTG
Trigger: ACCGGTGCCCGCAGGCTGGCAGCCGCCAGCCCTGCA...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGAAGACTTGCCCCGGCTaGGCCCCCGTGCTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGKTCPG*APVLRA
Trigger: GGCCCTCAGCACGGGGGCGCAGCCGGGGCAAGTCTT...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCTCTGAGGCTGGGGCGTaGCTGCCCGACGTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGSEAGA*LPDVAL
Trigger: GAGCGCCACGTCGGGCAGCCACGCCCCAGCCTCAGA...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCTCTGAGGCTGGGGCGTaGCTGCCCGACGTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLSEAGA*LPDVAL
Trigger: GAGCGCCACGTCGGGCAGCCACGCCCCAGCCTCAGA...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCGCTGTCTCCGGCCGGTaGGAGCGTGCGCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAAVSGR*ERAQAW
Trigger: CCACGCCTGCGCACGCTCCCACCGGCCGGAGACAGC...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCGCTGTCTCCGGCCGGTaGGAGCGTGCGCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRAVSGR*ERAQAW
Trigger: CCACGCCTGCGCACGCTCCCACCGGCCGGAGACAGC...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCTGTCCGAGCGCTCCTaGCTGTCTCCGGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLLSERS*LSPAGG
Trigger: CCCACCGGCCGGAGACAGCCAGGAGCGCTCGGACAG...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGAGGTCTCGGGGGCTGTaGGTGCAGGGCTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPRSRGL*VQGWRL
Trigger: CAGCCGCCAGCCCTGCACCCACAGCCCCCGAGACCT...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCGCAGCCGCCCTGCCTaGCAGGTCCCGAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GGPSPHMGKPRGRSPRLPRSRPA*QVPSPL
Trigger: GAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCG...AGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCGCAGCCGCCCTGCCTaGCAGGTCCCGAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGRSRPA*QVPSPL
Trigger: GAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCG...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGGCAGCAGGCGGTCCCTaGCGTTCTGCGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPAAGGP*RSAGPW
Trigger: CCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGC...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCCGTGCCTGAGCCCTTaGCAGCAGGCGGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGPCLSP*QQAVPG
Trigger: GCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGG...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCGTGCCTGAGCCCTTaGCAGCAGGCGGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGPCLSP*QQAVPG
Trigger: GCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGG...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCTATGCCGGTCCGCGTaGCGCGCAGGGCCGGATGGT +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGLCRSA*RAGPDG
Trigger: ACCATCCGGCCCTGCGCGCCACGCGGACCGGCATAG...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR TCA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCGCTCCGCCCGGGCTATaGGAAGATGGGCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRAPPGL*EDGHWQ
Trigger: CTGCCAGTGCCCATCTTCTCATAGCCCGGGCGGAGC...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCACCTCGCTGCTTCCTaGAGACTTGCCCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAHLAAS*RLAPAA
Trigger: CGCAGCCGGGGCAAGTCTTCAGGAAGCAGCGAGGTG...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR GCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATTGCTCCCGGGCTGCATaGCTGCGAGCGCCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHCSRAA*LRAPGG
Trigger: TCCGCCAGGCGCTCGCAGGCATGCAGCCCGGGAGCA...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCAGGCGCCCTGCACCTTaGAGGTCTGGAAGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRRRPAP*RSGSGR
Trigger: CCGACCGCTTCCAGACCTGCAAGGTGCAGGGCGCCT...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATGGCGGCTGCCAGCCTaGGGGCACCGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRWRLPA*GHRCPQ
Trigger: CTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGCCA...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGTGGCGGCTGCCAGCCTaGGGGCACCGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGWRLPA*GHRCPQ
Trigger: CTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGCCA...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGATGCAGGGCTGGCGGCTaGCAGCCTGCGGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: RQEICTPWAVPAHTWGSRCRAGG*QPAGTG
Trigger: ACCGGTGCCCGCAGGCTGGCAGCCGCCAGCCCTGCA...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGATGCAGGGCTGGCGGCTaGCAGCCTGCGGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGCRAGG*QPAGTG
Trigger: ACCGGTGCCCGCAGGCTGGCAGCCGCCAGCCCTGCA...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCCGGTCCCTGGCGTTCTaGGGGGCCATGGTGGACACG +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLRSLAF*GAMVDT
Trigger: CGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCG...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCGGTCCCTGGCGTTCTaGGGGGCCATGGTGGACACG +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGRSLAF*GAMVDT
Trigger: CGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCG...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCGCCAAGCCCCAAGGATaGCTCCCTGTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRAKPQG*LPVWLG
Trigger: CCCCAGCCACACAGGGAGGCATCCTTGGGGCTTGGC...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACAGCCCACGCGGTGCACTaGGCCGACATCCCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTAHAVH*ADIPEG
Trigger: GCCCTCGGGGATGTCGGCGCAGTGCACCGCGTGGGC...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543599.5
CDS-3UTR GCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGACGCGAGCCCACGCGGTaGACTGCGCCGACATCCCCG +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGREPTR*TAPTSP
Trigger: CGGGGATGTCGGCGCAGTGCACCGCGTGGGCTCGCG...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543599.5
CDS-3UTR CCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCGAGCGTGCGCAGGCGTaGCTGCGAGGTGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAERAQA*LRGGAI
Trigger: GATGGCCCCACCTCGCAGCCACGCCTGCGCACGCTC...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATCTGTCCGAGCGCTCCTaGCTGTCTCCGGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHLSERS*LSPAGG
Trigger: CCCACCGGCCGGAGACAGCCAGGAGCGCTCGGACAG...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCGCTTGCTGGTGGCAGTaGCCGCTGAGCCGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLACWWQ*PLSRAA
Trigger: TGCTGCCCGGCTCAGCGGCCACTGCCACCAGCAAGC...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GCGGCTGCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGCCTGGCGCAGCCGCCCTGCCTaGCAGGTCCCGAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: AAASLRAPVPSALVWKAWRSRPA*QVPSPL
Trigger: GAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCG...CCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGGCAGCAGGCGGTCCCTaGCGTTCTGCGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWAAGGP*RSAGPW
Trigger: CCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGC...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GCGGCTGCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGCCTGGGCAGCAGGCGGTCCCTaGCGTTCTGCGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: AAASLRAPVPSALVWKAWAAGGP*RSAGPW
Trigger: CCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGC...CCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCCGTGCCTGAGCCCTTaGCAGCAGGCGGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRPCLSP*QQAVPG
Trigger: GCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGG...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCGGGCGCAGTGAGCGGTaGGGTGGACGCGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAGRSER*GGRVLS
Trigger: GGAGAGCACGCGTCCACCCCACCGCTCACTGCGCCC...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGTCACGTCGCCCGTGGTaGGGAGGTCGAAGACGCAGG +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPSRRPW*GGRRRR
Trigger: CCTGCGTCTTCGACCTCCTCACCACGGGCGACGTGA...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGATCCCGGCCCCAGCCTTaGCCTGAGGGCCACTCAGCG +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGSRPQP*PEGHSA
Trigger: CGCTGAGTGGCCCTCAGGTCAAGGCTGGGGCCGGGA...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GGAGCGCCCCGCCCCAGCTCGTTCTCTGCCCTCAAGCGAGGAGTAGGTGGGCGCATGGGCTGGTCACCGTaGAGGGCCCCCTCCCCACAC +
Preference number: 4 (lower is better)
Translates to: GAPRPSSFSALKRGVGGRMGWSP*RAPSPH
Trigger: GTGTGGGGAGGGGGCCCTTCACGGTGACCAGCCCAT...GCGCCCACCTACTCCTCGCTTGAGGGCAGAGAACGAGCTGGGGCGGGGCGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGCCTCTCCCCTGGGTTaGGCTGCGGCGCGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHASPLG*AAARAG
Trigger: GCCGGCTCGCGCCGCAGCTCAACCCAGGGGAGAGGC...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543599.5
CDS-3UTR TCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCCAGGCCACCCATCCTaGCTGGGTTTGGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGPGHPS*LGLACL
Trigger: GAGGCAGGCCAAACCCAGTCAGGATGGGTGGCCTGG...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR GCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGCTCCTGCTCCCGGGCTaGATGCCTGCGAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGLLLPG*MPASAW
Trigger: CCAGGCGCTCGCAGGCATGCAGCCCGGGAGCAGGAG...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAAGGCTGGGGCGTGGCTaGCCGACGTGGCGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGRLGRG*PTWRSR
Trigger: TCTGGAGCGCCACGTCGGGCAGCCACGCCCCAGCCT...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAGGGCCGTCCGCCGCGTaGACAGGGCGTAGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGGPSAA*TGRSCA
Trigger: TGCGCAGCTACGCCCTGTGCACGCGGCGGACGGCCC...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGGTGCGCAGGCGTGGCTaGGAGGTGGGGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWVRRRG*EVGPSL
Trigger: CAAGGATGGCCCCACCTCGCAGCCACGCCTGCGCAC...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCGTGCGCAGGCGTGGCTaGGAGGTGGGGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRVRRRG*EVGPSL
Trigger: CAAGGATGGCCCCACCTCGCAGCCACGCCTGCGCAC...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGTGCGCAGGCGTGGCTaGGAGGTGGGGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHVRRRG*EVGPSL
Trigger: CAAGGATGGCCCCACCTCGCAGCCACGCCTGCGCAC...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTAGGCGCCCTGCACCTTaGAGGTCTGGAAGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: GGPSPHMGKPRGRSPRLPRRPAP*RSGSGR
Trigger: CCGACCGCTTCCAGACCTGCAAGGTGCAGGGCGCCT...AGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGAGGCGCCCTGCACCTTaGAGGTCTGGAAGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPRRPAP*RSGSGR
Trigger: CCGACCGCTTCCAGACCTGCAAGGTGCAGGGCGCCT...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGAGCGGCCAGGCGCCCTaGACCTTGCAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPSGQAP*TLQVWK
Trigger: CTTCCAGACCTGCAAGGTGCAGGGCGCCTGGCCGCT...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCAGCGGCCAGGCGCCCTaGACCTTGCAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLSGQAP*TLQVWK
Trigger: CTTCCAGACCTGCAAGGTGCAGGGCGCCTGGCCGCT...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGGCCTGCGGGCACCGGTaGCCTCAGCATTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGACGHR*PQHWCG
Trigger: TCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGC...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCTGCAGGGCTGGCGGCTaGCAGCCTGCGGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSCRAGG*QPAGTG
Trigger: ACCGGTGCCCGCAGGCTGGCAGCCGCCAGCCCTGCA...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCACACGCCAGGAGATCTaGACCCCGTGGGCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGTRQEI*TPWAVP
Trigger: TGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGACACGCCAGGAGATCTaGACCCCGTGGGCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPTRQEI*TPWAVP
Trigger: TGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGCGGTCCCTGGCGTTCTaGGGGGCCATGGTGGACACG +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWRSLAF*GAMVDT
Trigger: CGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCG...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCGGGGCGAGGGGAGCTaGTCTCCCTCTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: GGPSPHMGKPRGRSPRLPRGEGS*SPSHTA
Trigger: AGCTGTGTGAGAGGGAGAGCAGCTCCCCTCGCCCCG...AGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGGGCCGGGCCTTTCAGTaGATTGCGAGGGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAGRAFQ*IARGKE
Trigger: CTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCC...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGGCCAAGCCCCAAGGATaGCTCCCTGTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGAKPQG*LPVWLG
Trigger: CCCCAGCCACACAGGGAGGCATCCTTGGGGCTTGGC...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCAGCAGTCTGCTAAGGTaGCAAGCAGCGCCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRSSLLR*QAAPRG
Trigger: ACCCCGGGGCGCTGCTTGGCACCTTAGCAGACTGCT...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCGCCTTGAACACAGGCTaGCTGTGCCCCCTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLALNTG*LCPLER
Trigger: GCGCTCCAGGGGGCACAGGCAGCCTGTGTTCAAGGC...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCTGGTTTGGCGCTCTCTaGGAGGCCCGCAAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRWFGAL*EARKAA
Trigger: TGCAGCCTTGCGGGCCTCGCAGAGAGCGCCAAACCA...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGATCTGAGGCTGGGGCGTaGCTGCCCGACGTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGSEAGA*LPDVAL
Trigger: GAGCGCCACGTCGGGCAGCCACGCCCCAGCCTCAGA...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGATCTGAGGCTGGGGCGTaGCTGCCCGACGTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGSEAGA*LPDVAL
Trigger: GAGCGCCACGTCGGGCAGCCACGCCCCAGCCTCAGA...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACGAGCGTGCGCAGGCGTaGCTGCGAGGTGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHERAQA*LRGGAI
Trigger: GATGGCCCCACCTCGCAGCCACGCCTGCGCACGCTC...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGGAGCGTGCGCAGGCGTaGCTGCGAGGTGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGERAQA*LRGGAI
Trigger: GATGGCCCCACCTCGCAGCCACGCCTGCGCACGCTC...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGCTGTCCGAGCGCTCCTaGCTGTCTCCGGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGLSERS*LSPAGG
Trigger: CCCACCGGCCGGAGACAGCCAGGAGCGCTCGGACAG...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGCGCAGCCGCCCTGCCTaGCAGGTCCCGAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGRSRPA*QVPSPL
Trigger: GAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCG...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCAGCCGCCCTGCCTaGCAGGTCCCGAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTRSRPA*QVPSPL
Trigger: GAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCG...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGGAGATCTGCACCCCGTaGGCGGTCCCAGCCCACACA +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPEICTP*AVPAHT
Trigger: TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTC...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCGAGATCTGCACCCCGTaGGCGGTCCCAGCCCACACA +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLEICTP*AVPAHT
Trigger: TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTC...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGACCGTGCCTGAGCCCTTaGCAGCAGGCGGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RQEICTPWAVPAHTWGSRPCLSP*QQAVPG
Trigger: GCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGG...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCCCGTGCCTGAGCCCTTaGCAGCAGGCGGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEAPCLSP*QQAVPG
Trigger: GCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGG...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAGTGTGTGCGTGCGTGTaGCGGGCACAGGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGVCACV*RAQGAP
Trigger: TGGGGCCCCCTGTGCCCGCCACACGCACGCACACAC...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCTCAGGGCAGGCCAGCTaGCCCCATCCACTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLSGQAS*PHPLGL
Trigger: GAGACCCAGTGGATGGGGCCAGCTGGCCTGCCCTGA...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGGCGGCAAGTCTCTCCTaGCTGTGTGGCCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAAASLS*LCGHRA
Trigger: AGCCCTGTGGCCACACAGCCAGGAGAGACTTGCCGC...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGGCACAGCAGCACAGGTaGGACTGTTCTGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAAQQHR*DCSGPL
Trigger: CAGGGGCCCAGAACAGTCCCACCTGTGCTGCTGTGC...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCAGAGGGGCTGCCGATaGGTGGGTAGGGTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPQRGCR*VGRVWS
Trigger: GCTCCACACCCTACCCACCCATCGGCAGCCCCTCTG...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCAGAGGGGCTGCCGATaGGTGGGTAGGGTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGQRGCR*VGRVWS
Trigger: GCTCCACACCCTACCCACCCATCGGCAGCCCCTCTG...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGGCCCACACACGGTTCTaGCAGAGGGAGCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAAHTRF*QREQDL
Trigger: GAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGC...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGAGGCCTCCGCGGAGCTaGCAGCCAGGAACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGRPPRS*QPGTSR
Trigger: TCTGGAGGTTCCTGGCTGCCAGCTCCGCGGAGGCCT...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGGCCGGATGGTTTaGCGCTCTCTGCGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRQGRMV*RSLRGP
Trigger: CGGGCCTCGCAGAGAGCGCCAAACCATCCGGCCCTG...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CCA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCATCCTGACTGGGTTTaGCCTGCCTCCAGCACCCCC +
Preference number: 4 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRHPDWV*PASSTP
Trigger: GGGGGTGCTGGAGGCAGGCCAAACCCAGTCAGGATG...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGGTTCCCGCCCGTCGTaGCCCCAGGCCACCCATCCT +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEAGSRPS*PQATHP
Trigger: AGGATGGGTGGCCTGGGGCCACGACGGGCGGGAACC...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR TCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCAGTAGGCGGCCAGTGTaGAGTTCACGTCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGSRRPV*SSRRPW
Trigger: CCACGGGCGACGTGAACTTCACACTGGCCGCCTACT...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCTTCTGGGCCCCTGGATaGGCACCCTGGGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRFWAPG*APWAEM
Trigger: CATTTCAGCCCAGGGTGCTCATCCAGGGGCCCAGAA...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCGACACGTGGACGCAGTaGGGGGTCCCCACTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGDTWTQ*GVPTSK
Trigger: CTTGGAAGTGGGGACCCCTCACTGCGTCCACGTGTC...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGGACACGTGGACGCAGTaGGGGGTCCCCACTTCCAAG +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPDTWTQ*GVPTSK
Trigger: CTTGGAAGTGGGGACCCCTCACTGCGTCCACGTGTC...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGTCCTTGCTGCCTCCCTaGGTCGCTCTGTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGSLLPP*VALSLG
Trigger: TCCCAGGGACAGAGCGACTCAGGGAGGCAGCAAGGA...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGGAGCGAACGGCCAGTaGTTCCCCGGCCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSREGANGQ*FPGPAA
Trigger: AGCCGCTGGGCCGGGGAAGCACTGGCCGTTCGCTCC...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGAGGCTGGGGCGTGGCTaGCCGACGTGGCGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRRLGRG*PTWRSR
Trigger: TCTGGAGCGCCACGTCGGGCAGCCACGCCCCAGCCT...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGCCGTCCGCCGCGTaGACAGGGCGTAGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMGPSAA*TGRSCA
Trigger: TGCGCAGCTACGCCCTGTGCACGCGGCGGACGGCCC...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATCGGGGCGAGGGGAGCTaGTCTCCCTCTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHRGEGS*SPSHTA
Trigger: AGCTGTGTGAGAGGGAGAGCAGCTCCCCTCGCCCCG...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGGTAAGAGTGTGTGCGTaGGTGTGGCGGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGVRVCA*VWRAQG
Trigger: CCCCTGTGCCCGCCACACGCACGCACACACTCTTAC...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCGCCAAGCCCCAAGGATaGCTCCCTGTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRAKPQG*LPVWLG
Trigger: CCCCAGCCACACAGGGAGGCATCCTTGGGGCTTGGC...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCAGCAGTCTGCTAAGGTaGCAAGCAGCGCCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLSSLLR*QAAPRG
Trigger: ACCCCGGGGCGCTGCTTGGCACCTTAGCAGACTGCT...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAGGGGTGGCGTGGCATaGAGGAGCTGCCCCATGGAC +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWRGGVA*RSCPMD
Trigger: GTCCATGGGGCAGCTCCTGCATGCCACGCCACCCCT...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGTGTGCCGCTTCCTTCTaGCACCCGCATCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGCAASF*HPHPLP
Trigger: GGGAAGGGGATGCGGGTGGCAGAAGGAAGCGGCACA...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATCCCGTGCTGAGGGCCTaGGGGCCTAACCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDPVLRA*GPNLAT
Trigger: GGTGGCAAGGTTAGGCCCGCAGGCCCTCAGCACGGG...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCTCTTGCACGGGGAGGTaGCTGCGGGGAAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGSCTGR*LRGSCR
Trigger: TCTGCAGCTTCCCCGCAGCCACCTCCCCGTGCAAGA...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGTGGCTGCCCGACGTaGCGCTCCAGAACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPRGCPT*RSRTQS
Trigger: ACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACG...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATCTGAGGCTGGGGCGTaGCTGCCCGACGTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTSEAGA*LPDVAL
Trigger: GAGCGCCACGTCGGGCAGCCACGCCCCAGCCTCAGA...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGGGCGTGGCTGCGAGGTaGGGCCATCCTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWGVAAR*GHPWSS
Trigger: ACTGCTCCAAGGATGGCCCCACCTCGCAGCCACGCC...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAGAGCGTGCGCAGGCGTaGCTGCGAGGTGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTERAQA*LRGGAI
Trigger: GATGGCCCCACCTCGCAGCCACGCCTGCGCACGCTC...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGAGCGTGCGCAGGCGTaGCTGCGAGGTGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSREERAQA*LRGGAI
Trigger: GATGGCCCCACCTCGCAGCCACGCCTGCGCACGCTC...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAGAGCGTGCGCAGGCGTaGCTGCGAGGTGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGERAQA*LRGGAI
Trigger: GATGGCCCCACCTCGCAGCCACGCCTGCGCACGCTC...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGCTGTCTCCGGCCGGTaGGAGCGTGCGCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHAVSGR*ERAQAW
Trigger: CCACGCCTGCGCACGCTCCCACCGGCCGGAGACAGC...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp TTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCAGGGCTGGCTGTCTCCGGCCGGTaGGAGCGTGCGCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LATAVSYGKVSGAVGAGLAVSGR*ERAQAW
Trigger: CCACGCCTGCGCACGCTCCCACCGGCCGGAGACAGC...CAGCCCTGCACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGACTGTCCGAGCGCTCCTaGCTGTCTCCGGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGLSERS*LSPAGG
Trigger: CCCACCGGCCGGAGACAGCCAGGAGCGCTCGGACAG...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGCTTGCTGGTGGCAGTaGCCGCTGAGCCGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGACWWQ*PLSRAA
Trigger: TGCTGCCCGGCTCAGCGGCCACTGCCACCAGCAAGC...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGAGCTTGCTGGTGGCAGTaGCCGCTGAGCCGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRACWWQ*PLSRAA
Trigger: TGCTGCCCGGCTCAGCGGCCACTGCCACCAGCAAGC...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAAGGTCTCGGGGGCTGTaGGTGCAGGGCTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTRSRGL*VQGWRL
Trigger: CAGCCGCCAGCCCTGCACCCACAGCCCCCGAGACCT...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCACGGCTGTCTCGTATaGGAAGGTCTCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAHGCLV*EGLGGC
Trigger: ACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTG...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGGAGATCTGCACCCCGTaGGCGGTCCCAGCCCACACA +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWEICTP*AVPAHT
Trigger: TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTC...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCGTTCTGCGGGGCCATaGTGGACACGCCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGRSAGP*WTRQEI
Trigger: GATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACG...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCGTTCTGCGGGGCCATaGTGGACACGCCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLRSAGP*WTRQEI
Trigger: GATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACG...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGGTGTGTGCGTGCGTGTaGCGGGCACAGGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGVCACV*RAQGAP
Trigger: TGGGGCCCCCTGTGCCCGCCACACGCACGCACACAC...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCGTGTGTGCGTGCGTGTaGCGGGCACAGGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSVCACV*RAQGAP
Trigger: TGGGGCCCCCTGTGCCCGCCACACGCACGCACACAC...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCTCAGGGCAGGCCAGCTaGCCCCATCCACTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRSGQAS*PHPLGL
Trigger: GAGACCCAGTGGATGGGGCCAGCTGGCCTGCCCTGA...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACCCAGACTCCAGACGTaGATGGACCGGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTPRLQT*MDRAGG
Trigger: GCCCCCAGCCCGGTCCATCCACGTCTGGAGTCTGGG...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCCCCAGACTCCAGACGTaGATGGACCGGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEAPRLQT*MDRAGG
Trigger: GCCCCCAGCCCGGTCCATCCACGTCTGGAGTCTGGG...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGGCACAGCAGCACAGGTaGGACTGTTCTGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPAQQHR*DCSGPL
Trigger: CAGGGGCCCAGAACAGTCCCACCTGTGCTGCTGTGC...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCGGGAGCAGGACCTCTTaGAGGGAGGGGGAGACACAC +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLGSRTS*REGETH
Trigger: GTGTGTCTCCCCCTCCCTCCAAGAGGTCCTGCTCCC...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCGCCCACACACGGTTCTaGCAGAGGGAGCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLAHTRF*QREQDL
Trigger: GAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGC...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCCACTGGCAGGGAGGGTaGCAGGCAGTCCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLHWQGG*QAVPTA
Trigger: AGCTGTTGGGACTGCCTGCCACCCTCCCTGCCAGTG...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGGGGATCTGGGCTGCCTaGGATCACAGCCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAGIWAA*DHSPHS
Trigger: GGAATGAGGGCTGTGATCCCAGGCAGCCCAGATCCC...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGCCAGAGCCCACTCCATaGCTGGGCGAGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWPEPTP*LGELGS
Trigger: ACTGCCCAGCTCGCCCAGCCATGGAGTGGGCTCTGG...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGGGGGCGGCTTGGCAATaGGCATCCTCGGCCCTCAAT +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGGAAWQ*ASSALN
Trigger: ATTGAGGGCCGAGGATGCCCATTGCCAAGCCGCCCC...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
70% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543599.5
CDS-3UTR CCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATAAAGCCGGGGCGGCTTaGCAATGGGCATCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHKAGAA*QWASSA
Trigger: GGCCGAGGATGCCCATTGCCAAGCCGCCCCGGCTTT...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543599.5
CDS-3UTR TCA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGACCAGAATCCCAGGGCTaGACGTCCTGCCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RQEICTPWAVPAHTWGSRPESQG*TSCPSP
Trigger: GGGAGAGGGGCAGGACGTTCAGCCCTGGGATTCTGG...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCTCACGTCGCCCGTGGTaGGGAGGTCGAAGACGCAGG +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEASRRPW*GGRRRR
Trigger: CCTGCGTCTTCGACCTCCTCACCACGGGCGACGTGA...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACTCACGTCGCCCGTGGTaGGGAGGTCGAAGACGCAGG +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHSRRPW*GGRRRR
Trigger: CCTGCGTCTTCGACCTCCTCACCACGGGCGACGTGA...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATCACGTCGCCCGTGGTaGGGAGGTCGAAGACGCAGG +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRSRRPW*GGRRRR
Trigger: CCTGCGTCTTCGACCTCCTCACCACGGGCGACGTGA...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATAGTAGGCGGCCAGTGTaGAGTTCACGTCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHSRRPV*SSRRPW
Trigger: CCACGGGCGACGTGAACTTCACACTGGCCGCCTACT...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp GGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCTCCTGGCCAGTGTATaGGAGGTCCCTGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: GGPSPHMGKPRGRSPRLPLLASV*EVPGEQ
Trigger: CTGTTCCCCAGGGACCTCTCATACACTGGCCAGGAG...AGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp GGAGCGCCCCGCCCCAGCTCGTTCTCTGCCCTCAAGCGAGGAGTAGGTGGGCGCGACACGTGGACGCAGTaGGGGGTCCCCACTTCCAAG +
Preference number: 4 (lower is better)
Translates to: GAPRPSSFSALKRGVGGRDTWTQ*GVPTSK
Trigger: CTTGGAAGTGGGGACCCCTCACTGCGTCCACGTGTC...GCGCCCACCTACTCCTCGCTTGAGGGCAGAGAACGAGCTGGGGCGGGGCGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CGGCCCACCTGGCGCACCACGATGGTGGTGCCGATGTACTTGGCCTGGATCTCCAGGCTGGGGCGTGGCTaGCCGACGTGGCGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RPTWRTTMVVPMYLAWISRLGRG*PTWRSR
Trigger: TCTGGAGCGCCACGTCGGGCAGCCACGCCCCAGCCT...GGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR GCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGAAGCGGCCAGGCGCCCTaGACCTTGCAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRSGQAP*TLQVWK
Trigger: CTTCCAGACCTGCAAGGTGCAGGGCGCCTGGCCGCT...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAAGCGGCCAGGCGCCCTaGACCTTGCAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGSGQAP*TLQVWK
Trigger: CTTCCAGACCTGCAAGGTGCAGGGCGCCTGGCCGCT...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATAGCGGCCAGGCGCCCTaGACCTTGCAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDSGQAP*TLQVWK
Trigger: CTTCCAGACCTGCAAGGTGCAGGGCGCCTGGCCGCT...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGGCACCACGATGGTGGTaGCGATGTACTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAAPRWW*RCTWPG
Trigger: TCCAGGCCAAGTACATCGGCACCACCATCGTGGTGC...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCACTTCCTCTGGCATaGGGACGGCAAAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAPLPLA*GRQRSG
Trigger: ACCTGACCTTTGCCGTCCGCATGCCAGAGGAAGTGG...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCCGGCAGCTTCTCCTTaGACTTGGCCACGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GGPSPHMGKPRGRSPRLPPAASP*TWPRLS
Trigger: AGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGG...AGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCACACGCCAGGAGATCTaGACCCCGTGGGCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEATRQEI*TPWAVP
Trigger: TGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGGGGAGGGGTCCGTaGCTGAGCCCTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGKGRGP*LSPWQQ
Trigger: CTGCTGCCAAGGGCTCAGGCACGGACCCCTCCCCTT...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAAAGGGGAGGGGTCCGTaGCTGAGCCCTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGKGRGP*LSPWQQ
Trigger: CTGCTGCCAAGGGCTCAGGCACGGACCCCTCCCCTT...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACAAAGGGGAGGGGTCCGTaGCTGAGCCCTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTKGRGP*LSPWQQ
Trigger: CTGCTGCCAAGGGCTCAGGCACGGACCCCTCCCCTT...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGGGCCTTTCAGTGCATTaGGAGGGGGAAGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAGLSVH*EGEGAD
Trigger: GTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCC...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGTAAGAGTGTGTGCGTaGGTGTGGCGGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHVRVCA*VWRAQG
Trigger: CCCCTGTGCCCGCCACACGCACGCACACACTCTTAC...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGCCAAGCCCCAAGGATaGCTCCCTGTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEAAKPQG*LPVWLG
Trigger: CCCCAGCCACACAGGGAGGCATCCTTGGGGCTTGGC...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCCCTCCAGGGCCTGGCTaGACTTTTGGGAGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLPPGPG*TFGSEA
Trigger: GGCTTCACTCCCAAAAGTGCAGCCAGGCCCTGGAGG...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATCTCCTGCAGCACCACTaGTCCGCCCGGGCTATGAGA +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHLLQHH*SARAMR
Trigger: TCTCATAGCCCGGGCGGAGCAGTGGTGCTGCAGGAG...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTTCCGCTCCTCCTTGCTaGCTCCCTGAGTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GGPSPHMGKPRGRSPRLPSAPPC*LPESLC
Trigger: ACAGAGCGACTCAGGGAGGCAGCAAGGAGGAGCGGA...AGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGCCCAAGTGCCACCCCTaGTCCATGCCACTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWPKCHP*SMPLAG
Trigger: GCCAGCAAGTGGCATGGAGCAGGGGTGGCACTTGGG...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGCAGCCCGAGCCCAAGTaGCACCCCTGCTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGQPEPK*HPCSMP
Trigger: TGGCATGGAGCAGGGGTGGCACTTGGGCTCGGGCTG...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGCGAGGCCCGCAAGGCTaGACTTGGGAGGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWRGPQG*TWEGFS
Trigger: ACTGAAGCCCTCCCAAGTGCAGCCTTGCGGGCCTCG...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR GCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCACCTTGGCACAGCTaGCACTCCAGAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAPPWHS*HSREMA
Trigger: AGCCATCTCTCTGGAGTGGCAGCTGTGCCAAGGTGG...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR GCA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGATGCTTCCTGAAGACTTaGCCCGGCTGCGCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: RQEICTPWAVPAHTWGSRCFLKT*PGCAPV
Trigger: CACGGGGGCGCAGCCGGGGCAAGTCTTCAGGAAGCA...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CCA 90 bp ACCCTCTGCTCACCCCAGAACCAGAGCCCTGGTTTGACTCCGCCCCTGCTGTGGGCTGTCTCCGGCCGGTaGGAGCGTGCGCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: TLCSPQNQSPGLTPPLLWAVSGR*ERAQAW
Trigger: CCACGCCTGCGCACGCTCCCACCGGCCGGAGACAGC...CCACAGCAGGGGCGGAGTCAAACCAGGGCTCTGGTTCTGGGGTGAGCAGAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGACTGTCCGAGCGCTCCTaGCTGTCTCCGGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGLSERS*LSPAGG
Trigger: CCCACCGGCCGGAGACAGCCAGGAGCGCTCGGACAG...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGCTGTCCGAGCGCTCCTaGCTGTCTCCGGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMLSERS*LSPAGG
Trigger: CCCACCGGCCGGAGACAGCCAGGAGCGCTCGGACAG...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCACAGTGCGTGTAGTTaGGGGTGGCCGAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAHSACS*GWPSAC
Trigger: ACAAGCACTCGGCCACCCCCAACTACACGCACTGTG...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTGGCGCACCACGATaGTGGTGCCGATGTACTTGG +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLPGAPR*WCRCTW
Trigger: CCAAGTACATCGGCACCACCATCGTGGTGCGCCAGG...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCTGGAAGTCGATCTGCTaGTTGAGGGGGCAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAWKSIC*LRGQPR
Trigger: GCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCA...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATAGGTCTCGGGGGCTGTaGGTGCAGGGCTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHRSRGL*VQGWRL
Trigger: CAGCCGCCAGCCCTGCACCCACAGCCCCCGAGACCT...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAAGGTCTCGGGGGCTGTaGGTGCAGGGCTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGRSRGL*VQGWRL
Trigger: CAGCCGCCAGCCCTGCACCCACAGCCCCCGAGACCT...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCACGGCTGTCTCGTATaGGAAGGTCTCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGHGCLV*EGLGGC
Trigger: ACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTG...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGACGCAGCCGCCCTGCCTaGCAGGTCCCGAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGRSRPA*QVPSPL
Trigger: GAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCG...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGATCTGCACCCCGTaGGCGGTCCCAGCCCACACA +
Preference number: 4 (lower is better)
Translates to: RQEICTPWAVPAHTWGSREICTP*AVPAHT
Trigger: TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTC...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCTCTGCGGGGCCATGGTaGACACGCCAGGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHASAGPW*TRQEIC
Trigger: GCAGATCTCCTGGCGTGTCCACCATGGCCCCGCAGA...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATTCTGCGGGGCCATGGTaGACACGCCAGGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHSAGPW*TRQEIC
Trigger: GCAGATCTCCTGGCGTGTCCACCATGGCCCCGCAGA...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGCAGCAGGCGGTCCCTaGCGTTCTGCGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMAAGGP*RSAGPW
Trigger: CCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGC...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGTGTGTGCGTGCGTGTaGCGGGCACAGGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGVCACV*RAQGAP
Trigger: TGGGGCCCCCTGTGCCCGCCACACGCACGCACACAC...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGTGTGTGCGTGCGTGTaGCGGGCACAGGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMVCACV*RAQGAP
Trigger: TGGGGCCCCCTGTGCCCGCCACACGCACGCACACAC...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCTTTCTAAGCACAGGGTaGAAGGGGCAGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGFLSTG*KGQGPR
Trigger: CCTGGGCCCCTGCCCCTTCCACCCTGTGCTTAGAAA...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCTTTCTAAGCACAGGGTaGAAGGGGCAGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLFLSTG*KGQGPR
Trigger: CCTGGGCCCCTGCCCCTTCCACCCTGTGCTTAGAAA...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGTTTCTAAGCACAGGGTaGAAGGGGCAGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGFLSTG*KGQGPR
Trigger: CCTGGGCCCCTGCCCCTTCCACCCTGTGCTTAGAAA...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGATCAGGGCAGGCCAGCTaGCCCCATCCACTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGSGQAS*PHPLGL
Trigger: GAGACCCAGTGGATGGGGCCAGCTGGCCTGCCCTGA...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGTCAGGGCAGGCCAGCTaGCCCCATCCACTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGSGQAS*PHPLGL
Trigger: GAGACCCAGTGGATGGGGCCAGCTGGCCTGCCCTGA...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCGACTCCAGACGTGGATaGACCGGGCTGGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHADSRRG*TGLGAL
Trigger: AAGAGCCCCCAGCCCGGTCCATCCACGTCTGGAGTC...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGCCTGGAAGTCGCCCAGACTCCAGACGTaGATGGACCGGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ASLRAPVPSALVWKAWKSPRLQT*MDRAGG
Trigger: GCCCCCAGCCCGGTCCATCCACGTCTGGAGTCTGGG...CGACTTCCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGGCACAGCAGCACAGGTaGGACTGTTCTGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWAQQHR*DCSGPL
Trigger: CAGGGGCCCAGAACAGTCCCACCTGTGCTGCTGTGC...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCGGGCTATGAGAAGATaGGCACTGGCAGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLRAMRR*ALAGRV
Trigger: CACCCTCCCTGCCAGTGCCCATCTTCTCATAGCCCG...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGTCCTGCGGTCAGCATaGCCCCGAGCCAGCTCACCA +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGVLRSA*PRASSP
Trigger: TGGTGAGCTGGCTCGGGGCCATGCTGACCGCAGGAC...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGCGTGGCGGGGTAGGGTaGGGCTGGTCCAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGRGGVG*GWSSGQ
Trigger: CTGTCCACTGGACCAGCCCCACCCTACCCCGCCACG...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCGCAAGGCTGCACTTaGGAGGGCTTCAGTATGGTG +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAPQGCT*EGFSMV
Trigger: CACCATACTGAAGCCCTCCCAAGTGCAGCCTTGCGG...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CCA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCGCGCGCAGGGCCGGATaGTTTGGCGCTCTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSARRAG*FGALCE
Trigger: CTCGCAGAGAGCGCCAAACCATCCGGCCCTGCGCGC...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR TCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGCCAGAATCCCAGGGCTaGACGTCCTGCCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGPESQG*TSCPSP
Trigger: GGGAGAGGGGCAGGACGTTCAGCCCTGGGATTCTGG...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCGCACAGGCGTGTTGGTaGCCTGCACGTTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRAQACW*PARSGN
Trigger: ATTACCTGAACGTGCAGGTCACCAACACGCCTGTGC...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCTGACACCTTCTCAGTaGTCTTCAGGCTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPALTPSQ*SSGCWP
Trigger: GGGCCAACAGCCTGAAGATCACTGAGAAGGTGTCAG...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATAGTAGGCGGCCAGTGTaGAGTTCACGTCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDSRRPV*SSRRPW
Trigger: CCACGGGCGACGTGAACTTCACACTGGCCGCCTACT...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGAAGTAGGCGGCCAGTGTaGAGTTCACGTCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRSRRPV*SSRRPW
Trigger: CCACGGGCGACGTGAACTTCACACTGGCCGCCTACT...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGAATGAGCACCCTGGGCTaGAATGAGGCGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRMSTLG*NEAGAS
Trigger: GCTGGCTCCCGCCTCATTTCAGCCCAGGGTGCTCAT...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp GGAGCGCCCCGCCCCAGCTCGTTCTCTGCCCTCAAGCGAGGAGTAGGTGGGCGCTTCTGGGCCCCTGGATaGGCACCCTGGGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: GAPRPSSFSALKRGVGGRFWAPG*APWAEM
Trigger: CATTTCAGCCCAGGGTGCTCATCCAGGGGCCCAGAA...GCGCCCACCTACTCCTCGCTTGAGGGCAGAGAACGAGCTGGGGCGGGGCGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GCGGCTGCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGCCTGGTTCTGGGCCCCTGGATaGGCACCCTGGGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: AAASLRAPVPSALVWKAWFWAPG*APWAEM
Trigger: CATTTCAGCCCAGGGTGCTCATCCAGGGGCCCAGAA...CCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR TCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGCCGCATCCCCTTCCCTaGTGGGCTGGTCACCGTGAA +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGPHPLP*WAGHRE
Trigger: TTCACGGTGACCAGCCCATCAGGGAAGGGGATGCGG...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGCCGGGGAGCGCCTCCTaGTCCCGGGCTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGPGSAS*SRAACL
Trigger: CAGGCATGCAGCCCGGGAGCAGGAGGCGCTCCCCGG...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCTGCACAGGGCGTAGCTaGGCAAGGCTGCACAGAACT +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLCTGRS*ARLHRT
Trigger: AGTTCTGTGCAGCCTTGCGCAGCTACGCCCTGTGCA...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGTGCGCAGGCGTGGCTaGGAGGTGGGGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGVRRRG*EVGPSL
Trigger: CAAGGATGGCCCCACCTCGCAGCCACGCCTGCGCAC...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGGCGCCCTGCACCTTaGAGGTCTGGAAGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGRRPAP*RSGSGR
Trigger: CCGACCGCTTCCAGACCTGCAAGGTGCAGGGCGCCT...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGAGGCTGTTGGCCCCGTaGTTGTCCCCACCGTTCTTA +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPRLLAP*LSPPFL
Trigger: TAAGAACGGTGGGGACAAGCACGGGGCCAACAGCCT...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCAGGCTGTTGGCCCCGTaGTTGTCCCCACCGTTCTTA +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLRLLAP*LSPPFL
Trigger: TAAGAACGGTGGGGACAAGCACGGGGCCAACAGCCT...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGGCACCACGATGGTGGTaGCGATGTACTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPAPRWW*RCTWPG
Trigger: TCCAGGCCAAGTACATCGGCACCACCATCGTGGTGC...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCACTTCCTCTGGCATaGGGACGGCAAAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGPLPLA*GRQRSG
Trigger: ACCTGACCTTTGCCGTCCGCATGCCAGAGGAAGTGG...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCACTTCCTCTGGCATaGGGACGGCAAAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLPLPLA*GRQRSG
Trigger: ACCTGACCTTTGCCGTCCGCATGCCAGAGGAAGTGG...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGCCTGGAAGTCGATCTaGTGGTTGAGGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGAWKSI*WLRGQP
Trigger: GGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGC...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GAGGGGGCAGCCCCGCAGGCAGAGGTAGAGACCCTGGCTGTCCCAGTCCTCCACGCCTGGAAGTCGATCTaGTGGTTGAGGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EGAAPQAEVETLAVPVLHAWKSI*WLRGQP
Trigger: GGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGC...GTGGAGGACTGGGACAGCCAGGGTCTCTACCTCTGCCTGCGGGGCTGCCCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR GCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAGCCTGCGGGCACCGGTaGCCTCAGCATTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTACGHR*PQHWCG
Trigger: TCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGC...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CTGCTGGTTGAGGGGGCAGCCCCGCAGGCAGAGGTAGAGACCCTGGCTGTCCCAGCCTGCGGGCACCGGTaGCCTCAGCATTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LLVEGAAPQAEVETLAVPACGHR*PQHWCG
Trigger: TCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGC...TGGGACAGCCAGGGTCTCTACCTCTGCCTGCGGGGCTGCCCCCTCAACCAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR GCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCCCGGCAGCTTCTCCTTaGACTTGGCCACGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAPAASP*TWPRLS
Trigger: AGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGG...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCACACGCCAGGAGATCTaGACCCCGTGGGCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSTRQEI*TPWAVP
Trigger: TGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAACACGCCAGGAGATCTaGACCCCGTGGGCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGTRQEI*TPWAVP
Trigger: TGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCAAGGGGAGGGGTCCGTaGCTGAGCCCTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSKGRGP*LSPWQQ
Trigger: CTGCTGCCAAGGGCTCAGGCACGGACCCCTCCCCTT...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACACGGGGCGAGGGGAGCTaGTCTCCCTCTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTRGEGS*SPSHTA
Trigger: AGCTGTGTGAGAGGGAGAGCAGCTCCCCTCGCCCCG...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCGGCCTTTCAGTGCATTaGGAGGGGGAAGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLGLSVH*EGEGAD
Trigger: GTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCC...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGAGGCCGGGCCTTTCAGTaGATTGCGAGGGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRGRAFQ*IARGKE
Trigger: CTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCC...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGGCCGGGCCTTTCAGTaGATTGCGAGGGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGGRAFQ*IARGKE
Trigger: CTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCC...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGGTAAGAGTGTGTGCGTaGGTGTGGCGGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGVRVCA*VWRAQG
Trigger: CCCCTGTGCCCGCCACACGCACGCACACACTCTTAC...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCTGAAAACCGGGACCTaGACTGGTACCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGLKTGT*TGTHSS
Trigger: GCTGCTGTGGGTACCAGTGCAGGTCCCGGTTTTCAG...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCCTCCAGGGCCTGGCTaGACTTTTGGGAGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRPPGPG*TFGSEA
Trigger: GGCTTCACTCCCAAAAGTGCAGCCAGGCCCTGGAGG...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATGAACAGCAGAGGGGCTaGCGATGGGTGGGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDEQQRG*RWVGRV
Trigger: CACCCTACCCACCCATCGGCAGCCCCTCTGCTGTTC...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAACAGCAGAGGGGCTaGCGATGGGTGGGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: RQEICTPWAVPAHTWGSREQQRG*RWVGRV
Trigger: CACCCTACCCACCCATCGGCAGCCCCTCTGCTGTTC...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGGGGAGACACACGTTCTaGAGCCTCCTGGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPGRHTF*SLLASV
Trigger: TACACTGGCCAGGAGGCTGCAGAACGTGTGTCTCCC...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCCCTTTGCTGCTGCTaGTCTAGGGCTGTTACACTG +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPAPLCCC*SRAVTL
Trigger: CAGTGTAACAGCCCTAGAGCAGCAGCAGCAAAGGGG...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCGGAGCCGGAGAGCCCTaGAGTACTTTGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAGAGEP*STLAAL
Trigger: CAGAGCAGCCAAAGTACTGCAGGGCTCTCCGGCTCC...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCTCGCTGCATTGCCACTaGCTCAGACTGGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLSLHCH*LRLAPD
Trigger: GTCAGGAGCCAGTCTGAGGCAGTGGCAATGCAGCGA...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGGGTGCGATCTCTGCTTaGTGCAAGTTCTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPGAISA*CKFCLP
Trigger: CGGGAGGCAGAACTTGCAGCAAGCAGAGATCGCACC...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCGTGTGTCTGTGCCCATaGCACTGTCCATCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRVCLCP*HCPSLA
Trigger: GGCCAGGGATGGACAGTGGCATGGGCACAGACACAC...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATCTGATGGAGCCTGCCTaGCCTTTGAGCCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHLMEPA*PLSPSS
Trigger: TGAGGAGGGGCTCAAAGGGCAGGCAGGCTCCATCAG...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCGCTGAATCGTCGCCGTaGCCTCCCGTCCACTTAGGA +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRAESSP*PPVHLG
Trigger: TCCTAAGTGGACGGGAGGGCACGGCGACGATTCAGC...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543599.5
CDS-3UTR GCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGACCAGAGAGATGGCTATaGCGGTCCGCGTGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGPERWL*RSAWRA
Trigger: TGCGCGCCACGCGGACCGGCATAGCCATCTCTCTGG...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGATCTTGCACGGGGAGGTaGCTGCGGGGAAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGSCTGR*LRGSCR
Trigger: TCTGCAGCTTCCCCGCAGCCACCTCCCCGTGCAAGA...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGCGTGGCTGCCCGACGTaGCGCTCCAGAACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGRGCPT*RSRTQS
Trigger: ACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACG...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGACGTGGCTGCCCGACGTaGCGCTCCAGAACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGRGCPT*RSRTQS
Trigger: ACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACG...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGCTTGCTGGTGGCAGTaGCCGCTGAGCCGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMACWWQ*PLSRAA
Trigger: TGCTGCCCGGCTCAGCGGCCACTGCCACCAGCAAGC...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGGGCGCACCACGATGGTaGTGCCGATGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWGAPRW*CRCTWP
Trigger: AGGCCAAGTACATCGGCACCACCATCGTGGTGCGCC...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCCCTGGCGCACCACGATaGTGGTGCCGATGTACTTGG +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAPGAPR*WCRCTW
Trigger: CCAAGTACATCGGCACCACCATCGTGGTGCGCCAGG...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GCGGCTGCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGCCTGGCCTGGCGCACCACGATaGTGGTGCCGATGTACTTGG +
Preference number: 4 (lower is better)
Translates to: AAASLRAPVPSALVWKAWPGAPR*WCRCTW
Trigger: CCAAGTACATCGGCACCACCATCGTGGTGCGCCAGG...CCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGATGGAAGTCGATCTGCTaGTTGAGGGGGCAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGWKSIC*LRGQPR
Trigger: GCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCA...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATGGAAGTCGATCTGCTaGTTGAGGGGGCAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRWKSIC*LRGQPR
Trigger: GCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCA...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCCACCTGGCGCACCACGATGGTGGTGCCGATGTACTTGGCCTGGATCTCCACGAGGTCTCGGGGGCTGTaGGTGCAGGGCTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PTWRTTMVVPMYLAWISTRSRGL*VQGWRL
Trigger: CAGCCGCCAGCCCTGCACCCACAGCCCCCGAGACCT...CGTGGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATCTGCGGGGCCATGGTaGACACGCCAGGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRSAGPW*TRQEIC
Trigger: GCAGATCTCCTGGCGTGTCCACCATGGCCCCGCAGA...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACTCTGCGGGGCCATGGTaGACACGCCAGGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHSAGPW*TRQEIC
Trigger: GCAGATCTCCTGGCGTGTCCACCATGGCCCCGCAGA...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACCGTTCTGCGGGGCCATaGTGGACACGCCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHRSAGP*WTRQEI
Trigger: GATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACG...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCGCAGCAGGCGGTCCCTaGCGTTCTGCGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGAAGGP*RSAGPW
Trigger: CCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGC...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCGCGGGCACGACCTACTaGCCAAAAGGTTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGAGTTY*PKGSSS
Trigger: ACTGCTGGAACCTTTTGGCCAGTAGGTCGTGCCCGC...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCGCGGGCACGACCTACTaGCCAAAAGGTTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLAGTTY*PKGSSS
Trigger: ACTGCTGGAACCTTTTGGCCAGTAGGTCGTGCCCGC...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAGACTCCAGACGTGGATaGACCGGGCTGGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGDSRRG*TGLGAL
Trigger: AAGAGCCCCCAGCCCGGTCCATCCACGTCTGGAGTC...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATCCCAGACTCCAGACGTaGATGGACCGGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHPRLQT*MDRAGG
Trigger: GCCCCCAGCCCGGTCCATCCACGTCTGGAGTCTGGG...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAGCGGCAAGTCTCTCCTaGCTGTGTGGCCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGAASLS*LCGHRA
Trigger: AGCCCTGTGGCCACACAGCCAGGAGAGACTTGCCGC...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGGCACAGCAGCACAGGTaGGACTGTTCTGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGAQQHR*DCSGPL
Trigger: CAGGGGCCCAGAACAGTCCCACCTGTGCTGCTGTGC...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGCAGTCCCAACAGCTaGGGCTCCAGGCTGATAGCA +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHGSPNS*GSRLIA
Trigger: TGCTATCAGCCTGGAGCCCCAGCTGTTGGGACTGCC...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATGGTCCCACAGTGACGTaGACAGCAGCCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDGPTVT*TAASCS
Trigger: GCTGCAGGAGGCTGCTGTCCACGTCACTGTGGGACC...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCCCATGGTCACACTGCTaGGGAGGTGGAGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAPWSHC*GGGEAR
Trigger: CCTGGCTTCTCCACCTCCCCAGCAGTGTGACCATGG...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGCCCAGGCTGGAGGCTaGAGTGCAGTGGTGCGATCT +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGAQAGG*SAVVRS
Trigger: AGATCGCACCACTGCACTCCAGCCTCCAGCCTGGGC...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGCCACTGTCCATCCCTaGCCATCCAGGCCCGTGAAA +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHATVHP*PSRPVK
Trigger: TTTCACGGGCCTGGATGGCCAGGGATGGACAGTGGC...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCAGCTCACCATGCACGTaGACCAGAGCCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLSSPCT*TRAHSM
Trigger: CATGGAGTGGGCTCTGGTCCACGTGCATGGTGAGCT...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAACTCCGCCCCTGCTGTaGGGCTCACGAGCATGCCTT +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGTPPLL*GSRACL
Trigger: AAGGCATGCTCGTGAGCCCCACAGCAGGGGCGGAGT...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GAGGGGGCAGCCCCGCAGGCAGAGGTAGAGACCCTGGCTGTCCCAGTCCTCCACTCCACCGACGCCCCCTaGCTCATCAGTCGCACTCAG +
Preference number: 4 (lower is better)
Translates to: EGAAPQAEVETLAVPVLHSTDAP*LISRTQ
Trigger: CTGAGTGCGACTGATGAGCCAGGGGGCGTCGGTGGA...GTGGAGGACTGGGACAGCCAGGGTCTCTACCTCTGCCTGCGGGGCTGCCCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR TCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGCCAGAATCCCAGGGCTaGACGTCCTGCCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMPESQG*TSCPSP
Trigger: GGGAGAGGGGCAGGACGTTCAGCCCTGGGATTCTGG...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGACTCAGAGTTGCACTTaGGGATCTTGCACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPTQSCT*GSCTGR
Trigger: CCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGT...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCACTCAGAGTTGCACTTaGGGATCTTGCACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLTQSCT*GSCTGR
Trigger: CCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGT...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCTGACACCTTCTCAGTaGTCTTCAGGCTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPLTPSQ*SSGCWP
Trigger: GGGCCAACAGCCTGAAGATCACTGAGAAGGTGTCAG...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCAGTCCTCCACAGCATTaGCCACTTCCTCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLSPPQH*PLPLAC
Trigger: GCATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACT...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGAGTCCTCCACAGCATTaGCCACTTCCTCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGSPPQH*PLPLAC
Trigger: GCATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACT...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGATGAGCACCCTGGGCTaGAATGAGGCGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGMSTLG*NEAGAS
Trigger: GCTGGCTCCCGCCTCATTTCAGCCCAGGGTGCTCAT...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCATGAGCACCCTGGGCTaGAATGAGGCGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSMSTLG*NEAGAS
Trigger: GCTGGCTCCCGCCTCATTTCAGCCCAGGGTGCTCAT...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTGCACTTTTGGGAGTaGAGCCTGGCTTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRLHFWE*SLALCC
Trigger: ACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAG...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGCTCCTGGCCAGTGTATaGGAGGTCCCTGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGLLASV*EVPGEQ
Trigger: CTGTTCCCCAGGGACCTCTCATACACTGGCCAGGAG...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACTCCTGGCCAGTGTATaGGAGGTCCCTGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTLLASV*EVPGEQ
Trigger: CTGTTCCCCAGGGACCTCTCATACACTGGCCAGGAG...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGGACACGTGGACGCAGTaGGGGGTCCCCACTTCCAAG +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGDTWTQ*GVPTSK
Trigger: CTTGGAAGTGGGGACCCCTCACTGCGTCCACGTGTC...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGAACCTGGTCCCACAGTaGCGTGGACAGCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGNLVPQ*RGQQPP
Trigger: AGGAGGCTGCTGTCCACGTCACTGTGGGACCAGGTT...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCTTGCATCGTTTCCTTaGCGGGGTGCTTTGGGGACT +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPLASFP*RGALGT
Trigger: AGTCCCCAAAGCACCCCGTCAAGGAAACGATGCAAG...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATGAGCTGGGCAGTGGGTaGCTGGCAGGAAATGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDELGSG*LAGNGQ
Trigger: CTGACCATTTCCTGCCAGTCACCCACTGCCCAGCTC...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCGCCTGTGGCTTAAGATaGGGGTCAGAGAACCTCCTG +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLACGLR*GSENLL
Trigger: CAGGAGGTTCTCTGACCCTCATCTTAAGCCACAGGC...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCACCGGTGCAGGAGGCTaGAAAACCCACTTCCGAGTT +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLTGAGG*KTHFRV
Trigger: AACTCGGAAGTGGGTTTTTCAGCCTCCTGCACCGGT...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425933.6
ENST00000554387.5
CDS-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGCTCTCCCTTGGCGGCTaGATGAGCCCCTGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGLSLGG*MSPCGP
Trigger: CGGGCCGCAGGGGCTCATGCAGCCGCCAAGGGAGAG...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGTAGCTGCGCAAGGCTaGACAGAACTCGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: RQEICTPWAVPAHTWGSRVAAQG*TELGGV
Trigger: GACACCCCCGAGTTCTGTGCAGCCTTGCGCAGCTAC...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGTAGCTGCGCAAGGCTaGACAGAACTCGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGVAAQG*TELGGV
Trigger: GACACCCCCGAGTTCTGTGCAGCCTTGCGCAGCTAC...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GCAGCCCCGCAGCCGCCCTGCCTGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTAGCTGCGCAAGGCTaGACAGAACTCGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: AAPQPPCLAGPESSHTGAVAAQG*TELGGV
Trigger: GACACCCCCGAGTTCTGTGCAGCCTTGCGCAGCTAC...TGCACCTGTATGAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCGGGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR GCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACGTAGCTGCGCAAGGCTaGACAGAACTCGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHVAAQG*TELGGV
Trigger: GACACCCCCGAGTTCTGTGCAGCCTTGCGCAGCTAC...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATTGCACAGGGCGTAGCTaGGCAAGGCTGCACAGAACT +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHCTGRS*ARLHRT
Trigger: AGTTCTGTGCAGCCTTGCGCAGCTACGCCCTGTGCA...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAGGCTGTTGGCCCCGTaGTTGTCCCCACCGTTCTTA +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWRLLAP*LSPPFL
Trigger: TAAGAACGGTGGGGACAAGCACGGGGCCAACAGCCT...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCGCCTGGATCTCCACGTaGTGGCCTGACACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAAWIST*WPDTFS
Trigger: TGAGAAGGTGTCAGGCCAGCACGTGGAGATCCAGGC...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGCACCACGATGGTGGTaGCGATGTACTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHAPRWW*RCTWPG
Trigger: TCCAGGCCAAGTACATCGGCACCACCATCGTGGTGC...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAGCCTGGAAGTCGATCTaGTGGTTGAGGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTAWKSI*WLRGQP
Trigger: GGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGC...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGCCTGCGGGCACCGGTaGCCTCAGCATTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMACGHR*PQHWCG
Trigger: TCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGC...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACCCGGCAGCTTCTCCTTaGACTTGGCCACGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHPAASP*TWPRLS
Trigger: AGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGG...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp ACCCTCTGCTCACCCCAGAACCAGAGCCCTGGTTTGACTCCGCCCCTGCTGTGGCGGTCCCTGGCGTTCTaGGGGGCCATGGTGGACACG +
Preference number: 4 (lower is better)
Translates to: TLCSPQNQSPGLTPPLLWRSLAF*GAMVDT
Trigger: CGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCG...CCACAGCAGGGGCGGAGTCAAACCAGGGCTCTGGTTCTGGGGTGAGCAGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGCGGTCCCTGGCGTTCTaGGGGGCCATGGTGGACACG +
Preference number: 4 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGRSLAF*GAMVDT
Trigger: CGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCG...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATCGGGGCGAGGGGAGCTaGTCTCCCTCTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHRGEGS*SPSHTA
Trigger: AGCTGTGTGAGAGGGAGAGCAGCTCCCCTCGCCCCG...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCAGTCTGCTAAGGTaGCAAGCAGCGCCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGSSLLR*QAAPRG
Trigger: ACCCCGGGGCGCTGCTTGGCACCTTAGCAGACTGCT...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCAGAGTCCTAAGACCCTaGTCCTCTCCCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGRVLRP*SSPQTP
Trigger: TGGAGTCTGGGGAGAGGAGCAGGGTCTTAGGACTCT...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGAGACCCTGCCAGGGATaGTCAGAGCTGAGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPRPCQG*SELRVL
Trigger: TAGGACTCTCAGCTCTGAGCATCCCTGGCAGGGTCT...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGCTCCGCTCCTCCTTaGTGCCTCCCTGAGTCGCTC +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHGSAPP*CLPESL
Trigger: GAGCGACTCAGGGAGGCAGCAAGGAGGAGCGGAGCC...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCTGGGGGCCTTGGCTGTaGCGATTCAGAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEAWGPWL*RFRRWW
Trigger: CCACCACCTTCTGAATCGGCACAGCCAAGGCCCCCA...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACACGCTCTGATGGAGCCTaGCTGCCCTTTGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTRSDGA*LPFEPL
Trigger: GAGGGGCTCAAAGGGCAGGCAGGCTCCATCAGAGCG...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATTTGCCGGAGTTTTCCTaGTCCACCCTGGGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDLPEFS*STLGRD
Trigger: GTCCCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAA...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGGTGAGGACAAGGGTGTaGCGCTTCCTTCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGVRTRV*RFLLPP
Trigger: GGGTGGCAGAAGGAAGCGGCACACCCTTGTCCTCAC...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAGGTTCCCTGGGCCCTaGAGTTCTGCTGCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHRFPGP*SSAAVV
Trigger: CACAACGGCAGCAGAACTGCAGGGCCCAGGGAACCT...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGCGTGGCTGCCCGACGTaGCGCTCCAGAACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSRERGCPT*RSRTQS
Trigger: ACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACG...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGACGTGGCTGCCCGACGTaGCGCTCCAGAACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGRGCPT*RSRTQS
Trigger: ACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACG...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCGGCAGCTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGTCTGAGGCTGGGGCGTaGCTGCCCGACGTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: PAASPCTWPRLSRMGRSRSEAGA*LPDVAL
Trigger: GAGCGCCACGTCGGGCAGCCACGCCCCAGCCTCAGA...CCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGTGGGGCCATCCTTaGAGCAGTTGTGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHARWGHP*SSCAGS
Trigger: TGAGCCAGCACAACTGCTCCAAGGATGGCCCCACCT...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATAGGTGGGGCCATCCTTaGAGCAGTTGTGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHRWGHP*SSCAGS
Trigger: TGAGCCAGCACAACTGCTCCAAGGATGGCCCCACCT...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGGCGTGGCTGCGAGGTaGGGCCATCCTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGGVAAR*GHPWSS
Trigger: ACTGCTCCAAGGATGGCCCCACCTCGCAGCCACGCC...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGCGTGGCTGCGAGGTaGGGCCATCCTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMGVAAR*GHPWSS
Trigger: ACTGCTCCAAGGATGGCCCCACCTCGCAGCCACGCC...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGCGTGTAGTTGGGGGTaGCCGAGTGCTTGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHACSWG*PSACES
Trigger: GCTTTCACAAGCACTCGGCCACCCCCAACTACACGC...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGCACAGTGCGTGTAGTTaGGGGTGGCCGAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWHSACS*GWPSAC
Trigger: ACAAGCACTCGGCCACCCCCAACTACACGCACTGTG...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCGAAAGTCCTGAGGTGTaGGTCCCCGAAGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRESPEV*VPEEAT
Trigger: TGTGGCCTCTTCGGGGACCCACACCTCAGGACTTTC...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGGAAAGTCCTGAGGTGTaGGTCCCCGAAGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWESPEV*VPEEAT
Trigger: TGTGGCCTCTTCGGGGACCCACACCTCAGGACTTTC...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGTGCACCTTGCAGGTCTaGAAGCGGTCGGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPCTLQV*KRSVKV
Trigger: GACTTTCACCGACCGCTTCCAGACCTGCAAGGTGCA...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCTGGATCTCCACGTGCTaGCCTGACACCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLWISTC*PDTFSV
Trigger: CACTGAGAAGGTGTCAGGCCAGCACGTGGAGATCCA...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGCCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWPMYLA*ISTCWP
Trigger: AGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGG...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRPMYLA*ISTCWP
Trigger: AGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGG...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GCGGCTGCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGCCTGGCCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: AAASLRAPVPSALVWKAWPMYLA*ISTCWP
Trigger: AGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGG...CCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGTGGTGCCGATGTACTTaGCCTGGATCTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGWCRCT*PGSPRA
Trigger: AGCACGTGGAGATCCAGGCCAAGTACATCGGCACCA...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACAGGCGCACCACGATGGTaGTGCCGATGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTGAPRW*CRCTWP
Trigger: AGGCCAAGTACATCGGCACCACCATCGTGGTGCGCC...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGGGCGCACCACGATGGTaGTGCCGATGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGGAPRW*CRCTWP
Trigger: AGGCCAAGTACATCGGCACCACCATCGTGGTGCGCC...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GAGGGGGCAGCCCCGCAGGCAGAGGTAGAGACCCTGGCTGTCCCAGTCCTCCACGGCGCACCACGATGGTaGTGCCGATGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: EGAAPQAEVETLAVPVLHGAPRW*CRCTWP
Trigger: AGGCCAAGTACATCGGCACCACCATCGTGGTGCGCC...GTGGAGGACTGGGACAGCCAGGGTCTCTACCTCTGCCTGCGGGGCTGCCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp GCTGCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGCCTGGAAGTGGAAGTCGATCTGCTaGTTGAGGGGGCAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: AASLRAPVPSALVWKAWKWKSIC*LRGQPR
Trigger: GCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCA...CTTCCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATCACGGCTGTCTCGTATaGGAAGGTCTCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDHGCLV*EGLGGC
Trigger: ACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTG...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACCACGGCTGTCTCGTATaGGAAGGTCTCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHHGCLV*EGLGGC
Trigger: ACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTG...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGAGATCTGCACCCCGTaGGCGGTCCCAGCCCACACA +
Preference number: 4 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGEICTP*AVPAHT
Trigger: TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTC...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATCTGCGGGGCCATGGTaGACACGCCAGGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTSAGPW*TRQEIC
Trigger: GCAGATCTCCTGGCGTGTCCACCATGGCCCCGCAGA...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGTTCTGCGGGGCCATaGTGGACACGCCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSRSAGP*WTRQEI
Trigger: GATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACG...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGCGTTCTGCGGGGCCATaGTGGACACGCCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGRSAGP*WTRQEI
Trigger: GATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACG...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAACCGGGACCTGCACTaGTACCCACAGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGNRDLH*YPQQPG
Trigger: ACCTGGCTGCTGTGGGTACCAGTGCAGGTCCCGGTT...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAACCGGGACCTGCACTaGTACCCACAGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHNRDLH*YPQQPG
Trigger: ACCTGGCTGCTGTGGGTACCAGTGCAGGTCCCGGTT...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATAACCGGGACCTGCACTaGTACCCACAGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDNRDLH*YPQQPG
Trigger: ACCTGGCTGCTGTGGGTACCAGTGCAGGTCCCGGTT...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGTTTCTAAGCACAGGGTaGAAGGGGCAGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGFLSTG*KGQGPR
Trigger: CCTGGGCCCCTGCCCCTTCCACCCTGTGCTTAGAAA...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGCCCAGACTCCAGACGTaGATGGACCGGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGPRLQT*MDRAGG
Trigger: GCCCCCAGCCCGGTCCATCCACGTCTGGAGTCTGGG...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTTCTCTCCTGGCTGTGTaGCCACAGGGCTTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: GGPSPHMGKPRGRSPRLPSLLAV*PQGLRE
Trigger: TTCCCTTAAGCCCTGTGGCCACACAGCCAGGAGAGA...AGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCGCGGCAAGTCTCTCCTaGCTGTGTGGCCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSAASLS*LCGHRA
Trigger: AGCCCTGTGGCCACACAGCCAGGAGAGACTTGCCGC...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAGGGGCTGCCGATGGGTaGGTAGGGTGTGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTGAADG*VGCGAV
Trigger: TACAGCTCCACACCCTACCCACCCATCGGCAGCCCC...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GCGGCCCACCTGGCGCACCACGATGGTGGTGCCGATGTACTTGGCCTGGATCTCCAGAGGGGCTGCCGATaGGTGGGTAGGGTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: AAHLAHHDGGADVLGLDLQRGCR*VGRVWS
Trigger: GCTCCACACCCTACCCACCCATCGGCAGCCCCTCTG...GAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGCGTTCTGCAGCCTCCTaGCCAGTGTATGAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWRSAAS*PVYERS
Trigger: GGACCTCTCATACACTGGCCAGGAGGCTGCAGAACG...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGAGCAGGACCTCTTaGAGGGAGGGGGAGACACAC +
Preference number: 4 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRGSRTS*REGETH
Trigger: GTGTGTCTCCCCCTCCCTCCAAGAGGTCCTGCTCCC...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGACTTTGGCTGCTCTGTaGCCTCACCTGGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGTLAAL*PHLGPL
Trigger: CAGGGGTCCCAGGTGAGGCCACAGAGCAGCCAAAGT...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGATGTCAGGGCAGGGGTaGCGTGGCATGCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGMSGQG*RGMQEL
Trigger: CAGCTCCTGCATGCCACGCCACCCCTGCCCTGACAT...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATTCTGGCTGGTCAGCCTaGGAGTATGTCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDSGWSA*EYVRAG
Trigger: CCCTGCCCTGACATACTCCCAGGCTGACCAGCCAGA...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGACAGGGTTGGGGGCCTTaGCTGTGCCGATTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGQGWGP*LCRFRR
Trigger: CCTTCTGAATCGGCACAGCCAAGGCCCCCAACCCTG...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGATCGGGTCTGGTTCTaGAGCCCGGGCCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSREDRVWF*SPGPSF
Trigger: GAAGGAAGGGCCCGGGCTCCAGAACCAGACCCGATC...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAAAGCCCAGGCCTAACTaGAAGGCTCAGGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTKPRPN*KAQGGL
Trigger: CAGGCCGCCCTGAGCCTTCCAGTTAGGCCTGGGCTT...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCTCCACCGACGCCCCCTaGCTCATCAGTCGCACTCAG +
Preference number: 4 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSSTDAP*LISRTQ
Trigger: CTGAGTGCGACTGATGAGCCAGGGGGCGTCGGTGGA...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425933.6
ENST00000554387.5
CDS-3UTR CCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAGCCACTCCAGAGAGATaGCTATGCCGGTCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTATPER*LCRSAW
Trigger: CCACGCGGACCGGCATAGCCATCTCTCTGGAGTGGC...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCTAACCTTGCCACCTTaGCACAGCTGCCACTCCAGA +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPLTLPP*HSCHSR
Trigger: TCTGGAGTGGCAGCTGTGCCAAGGTGGCAAGGTTAG...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR TCA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTCCAGAATCCCAGGGCTaGACGTCCTGCCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RAAVGRAFQCIARGKELTPESQG*TSCPSP
Trigger: GGGAGAGGGGCAGGACGTTCAGCCCTGGGATTCTGG...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATACTCAGAGTTGCACTTaGGGATCTTGCACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHTQSCT*GSCTGR
Trigger: CCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGT...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATGGTAATTATTGTCGATaGGCGGCCAGGCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDGNYCR*AARRPA
Trigger: TGCAGGGCGCCTGGCCGCTCATCGACAATAATTACC...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACGGTAATTATTGTCGATaGGCGGCCAGGCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHGNYCR*AARRPA
Trigger: TGCAGGGCGCCTGGCCGCTCATCGACAATAATTACC...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCCTCCACGTGCTGGCCTaGCACCTTCTCAGTGATCTT +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHALHVLA*HLLSDL
Trigger: AAGATCACTGAGAAGGTGTCAGGCCAGCACGTGGAG...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp GCGGCCCACCTGGCGCACCACGATGGTGGTGCCGATGTACTTGGCCTGGATCTCAGTAGGCGGCCAGTGTaGAGTTCACGTCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: AAHLAHHDGGADVLGLDLSRRPV*SSRRPW
Trigger: CCACGGGCGACGTGAACTTCACACTGGCCGCCTACT...GAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR TCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCTGGAGTGGAGCATCTTaGCATCCTCCAACGCGTAGT +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLWSGAS*HPPTRS
Trigger: ACTACGCGTTGGAGGATGTCAAGATGCTCCACTCCA...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGTGGAGTGGAGCATCTTaGCATCCTCCAACGCGTAGT +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGWSGAS*HPPTRS
Trigger: ACTACGCGTTGGAGGATGTCAAGATGCTCCACTCCA...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCTGGAGTGGAGCATCTTaGCATCCTCCAACGCGTAGT +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLWSGAS*HPPTRS
Trigger: ACTACGCGTTGGAGGATGTCAAGATGCTCCACTCCA...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATATGAGCACCCTGGGCTaGAATGAGGCGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHMSTLG*NEAGAS
Trigger: GCTGGCTCCCGCCTCATTTCAGCCCAGGGTGCTCAT...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAGTATGTACACGCGGTaGCACTCCACACAGGTCGCA +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWSMYTR*HSTQVA
Trigger: TGCGACCTGTGTGGAGTGTCACCGCGTGTACATACT...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGATTCTAGCCCGACTCTaGAGGCCGAGCCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGILARL*RPSLSP
Trigger: TGGTGACAGGCTCGGCCTTCAGAGTCGGGCTAGAAT...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GTGCCCTCGAGGTGGTCAGTAACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACAGGCTGGGGCGTGGCTaGCCGACGTGGCGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VPSRWSVTGGLKRTAASYRLGRG*PTWRSR
Trigger: TCTGGAGCGCCACGTCGGGCAGCCACGCCCCAGCCT...GTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTTACTGACCACCTCGAGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCTGCACAGGGCGTAGCTaGGCAAGGCTGCACAGAACT +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEACTGRS*ARLHRT
Trigger: AGTTCTGTGCAGCCTTGCGCAGCTACGCCCTGTGCA...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGATGCACAGGGCGTAGCTaGGCAAGGCTGCACAGAACT +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGCTGRS*ARLHRT
Trigger: AGTTCTGTGCAGCCTTGCGCAGCTACGCCCTGTGCA...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACGGGCCGTCCGCCGCGTaGACAGGGCGTAGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHGPSAA*TGRSCA
Trigger: TGCGCAGCTACGCCCTGTGCACGCGGCGGACGGCCC...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTTCCTTGGAGCAGTTGTaGTGGCTCATGAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GGPSPHMGKPRGRSPRLPSLEQL*WLMRSS
Trigger: AGAGGACCTCATGAGCCAGCACAACTGCTCCAAGGA...AGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAGGCTGTTGGCCCCGTaGTTGTCCCCACCGTTCTTA +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHRLLAP*LSPPFL
Trigger: TAAGAACGGTGGGGACAAGCACGGGGCCAACAGCCT...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGGCACCACGATGGTGGTaGCGATGTACTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGAPRWW*RCTWPG
Trigger: TCCAGGCCAAGTACATCGGCACCACCATCGTGGTGC...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGACCACTTCCTCTGGCATaGGGACGGCAAAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGPLPLA*GRQRSG
Trigger: ACCTGACCTTTGCCGTCCGCATGCCAGAGGAAGTGG...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGTGGCGGCTGCCAGCCTaGGGGCACCGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVWRLPA*GHRCPQ
Trigger: CTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGCCA...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCAAGGGGAGGGGTCCGTaGCTGAGCCCTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGKGRGP*LSPWQQ
Trigger: CTGCTGCCAAGGGCTCAGGCACGGACCCCTCCCCTT...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGAGGCCTTTCAGTGCATTaGGAGGGGGAAGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRGLSVH*EGEGAD
Trigger: GTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCC...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGTCGTGTAAGAGTGTGTaGGTGCGTGTGGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGSCKSV*VRVAGT
Trigger: TGTGCCCGCCACACGCACGCACACACTCTTACACGA...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGACTGAAAACCGGGACCTaGACTGGTACCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRLKTGT*TGTHSS
Trigger: GCTGCTGTGGGTACCAGTGCAGGTCCCGGTTTTCAG...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATAGAGTCCTAAGACCCTaGTCCTCTCCCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHRVLRP*SSPQTP
Trigger: TGGAGTCTGGGGAGAGGAGCAGGGTCTTAGGACTCT...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGCCTCCAGGGCCTGGCTaGACTTTTGGGAGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGPPGPG*TFGSEA
Trigger: GGCTTCACTCCCAAAAGTGCAGCCAGGCCCTGGAGG...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GCGGCCCACCTGGCGCACCACGATGGTGGTGCCGATGTACTTGGCCTGGATCTCGAACAGCAGAGGGGCTaGCGATGGGTGGGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: AAHLAHHDGGADVLGLDLEQQRG*RWVGRV
Trigger: CACCCTACCCACCCATCGGCAGCCCCTCTGCTGTTC...GAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR GCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACAGCACACACACACACTTaGTGCAGGGGATCCCACCAC +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTAHTHT*CRGSHH
Trigger: GTGGTGGGATCCCCTGCAGCAAGTGTGTGTGTGTGC...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATTTCCAGTCTGGTTCCTaGCTCCCAAACCCAACTCCC +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHFQSGS*LPNPTP
Trigger: GGGAGTTGGGTTTGGGAGGCAGGAACCAGACTGGAA...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCGGAAAGTGCAGTCCCTaGCCTTGTGTGTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLGKCSP*PCVSCL
Trigger: CAGACAAGACACACAAGGGCAGGGACTGCACTTTCC...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGAATGTTGAAAAGCCCTaGAGGATGGGGAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPANVEKP*RMGKVA
Trigger: AGCCACCTTCCCCATCCTGCAGGGCTTTTCAACATT...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCGCCTTGCACACTGGCTaGCTGCAGCTGTCTATTAAT +
Preference number: 4 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRALHTG*LQLSIN
Trigger: ATTAATAGACAGCTGCAGGCAGCCAGTGTGCAAGGC...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCACTCAAGAAGGCGGTTaGCGGAGTTTTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGTQEGG*RSFPAP
Trigger: TGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGT...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGTTGGACAGGGACCGCTaGAGCTGGGAAGAGAGATTG +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWLDRDR*SWEERL
Trigger: CAATCTCTCTTCCCAGCTGCAGCGGTCCCTGTCCAA...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGCTTCAAGCACCTCGCTaGTTCCTGAAGACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWLQAPR*FLKTCP
Trigger: GGGGCAAGTCTTCAGGAAGCAGCGAGGTGCTTGAAG...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGTCTTGCACGGGGAGGTaGCTGCGGGGAAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMSCTGR*LRGSCR
Trigger: TCTGCAGCTTCCCCGCAGCCACCTCCCCGTGCAAGA...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATAGGTGGGGCCATCCTTaGAGCAGTTGTGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDRWGHP*SSCAGS
Trigger: TGAGCCAGCACAACTGCTCCAAGGATGGCCCCACCT...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCGGCGTGGCTGCGAGGTaGGGCCATCCTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGGVAAR*GHPWSS
Trigger: ACTGCTCCAAGGATGGCCCCACCTCGCAGCCACGCC...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATGCGTGTAGTTGGGGGTaGCCGAGTGCTTGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDACSWG*PSACES
Trigger: GCTTTCACAAGCACTCGGCCACCCCCAACTACACGC...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATCACAGTGCGTGTAGTTaGGGGTGGCCGAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDHSACS*GWPSAC
Trigger: ACAAGCACTCGGCCACCCCCAACTACACGCACTGTG...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGCACAGTGCGTGTAGTTaGGGGTGGCCGAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGHSACS*GWPSAC
Trigger: ACAAGCACTCGGCCACCCCCAACTACACGCACTGTG...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGACACAGTGCGTGTAGTTaGGGGTGGCCGAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRHSACS*GWPSAC
Trigger: ACAAGCACTCGGCCACCCCCAACTACACGCACTGTG...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGAGAAAGTCCTGAGGTGTaGGTCCCCGAAGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRESPEV*VPEEAT
Trigger: TGTGGCCTCTTCGGGGACCCACACCTCAGGACTTTC...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATGAAAGTCCTGAGGTGTaGGTCCCCGAAGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDESPEV*VPEEAT
Trigger: TGTGGCCTCTTCGGGGACCCACACCTCAGGACTTTC...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGTGGATCTCCACGTGCTaGCCTGACACCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWWISTC*PDTFSV
Trigger: CACTGAGAAGGTGTCAGGCCAGCACGTGGAGATCCA...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGACCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGPMYLA*ISTCWP
Trigger: AGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGG...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGCCTGGCGCACCACGATaGTGGTGCCGATGTACTTGG +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSREPGAPR*WCRCTW
Trigger: CCAAGTACATCGGCACCACCATCGTGGTGCGCCAGG...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGTTGGTGTGGAAGGCCTaGAAGTCGATCTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPLVWKA*KSICWL
Trigger: CAACCAGCAGATCGACTTCCAGGCCTTCCACACCAA...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGACGGTGCCCTCAGCATTaGTGTGGAAGGCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGRCPQH*CGRPGS
Trigger: ACTTCCAGGCCTTCCACACCAATGCTGAGGGCACCG...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATCGGTGCCCTCAGCATTaGTGTGGAAGGCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDRCPQH*CGRPGS
Trigger: ACTTCCAGGCCTTCCACACCAATGCTGAGGGCACCG...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp TTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCAGGGCTGTCTGCGGGGCCATGGTaGACACGCCAGGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: LATAVSYGKVSGAVGAGLSAGPW*TRQEIC
Trigger: GCAGATCTCCTGGCGTGTCCACCATGGCCCCGCAGA...CAGCCCTGCACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGCGGGCACGACCTACTaGCCAAAAGGTTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGAGTTY*PKGSSS
Trigger: ACTGCTGGAACCTTTTGGCCAGTAGGTCGTGCCCGC...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GCGGCCCACCTGGCGCACCACGATGGTGGTGCCGATGTACTTGGCCTGGATCTCGACTCCAGACGTGGATaGACCGGGCTGGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: AAHLAHHDGGADVLGLDLDSRRG*TGLGAL
Trigger: AAGAGCCCCCAGCCCGGTCCATCCACGTCTGGAGTC...GAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGGAAGGCCTGGAAGTCGATCTGCTGGTTGAGGGGGCAGCCCCGCAGGCAGAGGCGGCAAGTCTCTCCTaGCTGTGTGGCCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: VEGLEVDLLVEGAAPQAEAASLS*LCGHRA
Trigger: AGCCCTGTGGCCACACAGCCAGGAGAGACTTGCCGC...CTCTGCCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCACAGCAGCACAGGTaGGACTGTTCTGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGAQQHR*DCSGPL
Trigger: CAGGGGCCCAGAACAGTCCCACCTGTGCTGCTGTGC...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGCTGCCGATGGGTaGGTAGGGTGTGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHGAADG*VGCGAV
Trigger: TACAGCTCCACACCCTACCCACCCATCGGCAGCCCC...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGCAGAGGGGCTGCCGATaGGTGGGTAGGGTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGQRGCR*VGRVWS
Trigger: GCTCCACACCCTACCCACCCATCGGCAGCCCCTCTG...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGACGTTCTGCAGCCTCCTaGCCAGTGTATGAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRRSAAS*PVYERS
Trigger: GGACCTCTCATACACTGGCCAGGAGGCTGCAGAACG...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGCGTTCTGCAGCCTCCTaGCCAGTGTATGAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGRSAAS*PVYERS
Trigger: GGACCTCTCATACACTGGCCAGGAGGCTGCAGAACG...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCAGGGCTGGGGAGCAGGACCTCTTaGAGGGAGGGGGAGACACAC +
Preference number: 4 (lower is better)
Translates to: LATAVSYGKVSGAVGAGLGSRTS*REGETH
Trigger: GTGTGTCTCCCCCTCCCTCCAAGAGGTCCTGCTCCC...CAGCCCTGCACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGACACTGCTGGGGAGGTaGAGAAGCCAGGATGTAGGC +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGTLLGR*RSQDVG
Trigger: GCCTACATCCTGGCTTCTCCACCTCCCCAGCAGTGT...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAAGCCCTGCAGTACTTTaGCTGCTCTGTGGCCTCACC +
Preference number: 4 (lower is better)
Translates to: RQEICTPWAVPAHTWGSRSPAVL*LLCGLT
Trigger: GGTGAGGCCACAGAGCAGCCAAAGTACTGCAGGGCT...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GGAGCGCCCCGCCCCAGCTCGTTCTCTGCCCTCAAGCGAGGAGTAGGTGGGCGCGCCACTGCCTCAGACTaGCTCCTGACTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GAPRPSSFSALKRGVGGRATASD*LLTSSF
Trigger: GAAAGAGGAAGTCAGGAGCCAGTCTGAGGCAGTGGC...GCGCCCACCTACTCCTCGCTTGAGGGCAGAGAACGAGCTGGGGCGGGGCGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGTGCGAGGGCGGAGGGTaGACTGTTTCTTCAAGATGC +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWCEGGG*TVSSRC
Trigger: GCATCTTGAAGAAACAGTCCACCCTCCGCCCTCGCA...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGGTGTGTCTTGTCTGCTaGGAGACACAGGTATGCGAG +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGVCLVC*ETQVCE
Trigger: CTCGCATACCTGTGTCTCCCAGCAGACAAGACACAC...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCTTTCGCCTTGGGATCTaGGCTGCCTGGGATCACAGC +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEAFRLGI*AAWDHS
Trigger: GCTGTGATCCCAGGCAGCCCAGATCCCAAGGCGAAA...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCAGAGGACGACAAAGATaGCAGCTCACCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLRGRQR*QLTMHV
Trigger: CACGTGCATGGTGAGCTGCCATCTTTGTCGTCCTCT...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCCAGCCACATCGGGGGTaGCCTACAAATGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAQPHRG*PTNVCA
Trigger: GGCACAAACATTTGTAGGCCACCCCCGATGTGGCTG...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGGGTAATTATTGTCGATaGGCGGCCAGGCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGGNYCR*AARRPA
Trigger: TGCAGGGCGCCTGGCCGCTCATCGACAATAATTACC...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGCACAGGCGTGTTGGTaGCCTGCACGTTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGAQACW*PARSGN
Trigger: ATTACCTGAACGTGCAGGTCACCAACACGCCTGTGC...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACTCCACGTGCTGGCCTaGCACCTTCTCAGTGATCTT +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTLHVLA*HLLSDL
Trigger: AAGATCACTGAGAAGGTGTCAGGCCAGCACGTGGAG...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCAGTCCTCCACAGCATTaGCCACTTCCTCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEASPPQH*PLPLAC
Trigger: GCATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACT...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp TCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTTCACGTCGCCCGTGGTaGGGAGGTCGAAGACGCAGG +
Preference number: 4 (lower is better)
Translates to: SLHLATAVSYGKVSGAVGSRRPW*GGRRRR
Trigger: CCTGCGTCTTCGACCTCCTCACCACGGGCGACGTGA...ACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR TCA 90 bp CCGGCAGCTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGTCACGTCGCCCGTGGTaGGGAGGTCGAAGACGCAGG +
Preference number: 4 (lower is better)
Translates to: PAASPCTWPRLSRMGRSRSRRPW*GGRRRR
Trigger: CCTGCGTCTTCGACCTCCTCACCACGGGCGACGTGA...CCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR TCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGTTCTGGGCCCCTGGATaGGCACCCTGGGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMFWAPG*APWAEM
Trigger: CATTTCAGCCCAGGGTGCTCATCCAGGGGCCCAGAA...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCCTGCACTTTTGGGAGTaGAGCCTGGCTTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHALHFWE*SLALCC
Trigger: ACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAG...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAGTATGTACACGCGGTaGCACTCCACACAGGTCGCA +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGSMYTR*HSTQVA
Trigger: TGCGACCTGTGTGGAGTGTCACCGCGTGTACATACT...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAACCGGTGCAGGAGGCTaGAAAACCCACTTCCGAGTT +
Preference number: 4 (lower is better)
Translates to: RQEICTPWAVPAHTWGSRTGAGG*KTHFRV
Trigger: AACTCGGAAGTGGGTTTTTCAGCCTCCTGCACCGGT...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000425933.6
ENST00000554387.5
CDS-3UTR GCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAAGGCTGTTGGCCCCGTaGTTGTCCCCACCGTTCTTA +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTRLLAP*LSPPFL
Trigger: TAAGAACGGTGGGGACAAGCACGGGGCCAACAGCCT...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCGCCTGGATCTCCACGTaGTGGCCTGACACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSAWIST*WPDTFS
Trigger: TGAGAAGGTGTCAGGCCAGCACGTGGAGATCCAGGC...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTGCCTGGAAGTCGATCTaGTGGTTGAGGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RAAVGRAFQCIARGKELTAWKSI*WLRGQP
Trigger: GGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGC...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTGCTTGGCGGCTGCCAGCCTaGGGGCACCGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PVTVASHHPLNSPFAAAAWRLPA*GHRCPQ
Trigger: CTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGCCA...AGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GTGGAAGGCCTGGAAGTCGATCTGCTGGTTGAGGGGGCAGCCCCGCAGGCAGAGCCGGCAGCTTCTCCTTaGACTTGGCCACGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: VEGLEVDLLVEGAAPQAEPAASP*TWPRLS
Trigger: AGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGG...CTCTGCCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR GCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACACAACCTTGTCACGTaGACTAGAAGGGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTHNLVT*TRRGGV
Trigger: GACCCCTCCCCTTCTAGTGCACGTGACAAGGTTGTG...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACAACCTTGTCACGTaGACTAGAAGGGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGHNLVT*TRRGGV
Trigger: GACCCCTCCCCTTCTAGTGCACGTGACAAGGTTGTG...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGCACAACCTTGTCACGTaGACTAGAAGGGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGHNLVT*TRRGGV
Trigger: GACCCCTCCCCTTCTAGTGCACGTGACAAGGTTGTG...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGCCTTTCAGTGCATTaGGAGGGGGAAGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRGLSVH*EGEGAD
Trigger: GTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCC...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGTCGTGTAAGAGTGTGTaGGTGCGTGTGGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSRESCKSV*VRVAGT
Trigger: TGTGCCCGCCACACGCACGCACACACTCTTACACGA...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACACTGAAAACCGGGACCTaGACTGGTACCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTLKTGT*TGTHSS
Trigger: GCTGCTGTGGGTACCAGTGCAGGTCCCGGTTTTCAG...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAAGAGTCCTAAGACCCTaGTCCTCTCCCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGRVLRP*SSPQTP
Trigger: TGGAGTCTGGGGAGAGGAGCAGGGTCTTAGGACTCT...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAAGACCCTGCCAGGGATaGTCAGAGCTGAGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGRPCQG*SELRVL
Trigger: TAGGACTCTCAGCTCTGAGCATCCCTGGCAGGGTCT...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAGGGAGACACACGTTCTaGAGCCTCCTGGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTGRHTF*SLLASV
Trigger: TACACTGGCCAGGAGGCTGCAGAACGTGTGTCTCCC...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp TCTGGAGCCCGGGCCCTTCCTTCGGTCTGGGTGTGTCTGTGCCCATGCCACTGTCTGGGATGGTGCCACTaGACTCCAGCCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: SGARALPSVWVCLCPCHCLGWCH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAGTGGCACCATCCCAG...ACAGTGGCATGGGCACAGACACACCCAGACCGAAGGAAGGGCCCGGGCTCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACAGTGGAAGAATCCAAGTaGCGTCTCAGGGTCACCCTG +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTVEESK*RLRVTL
Trigger: CAGGGTGACCCTGAGACGGCACTTGGATTCTTCCAC...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGATGGGGCTCACGAGCATaGCTTGAACACAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGWGSRA*LEHRLP
Trigger: AGGCAGCCTGTGTTCAAGGCATGCTCGTGAGCCCCA...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGCAGACGCGACACCGGTaGAGGAGGCTGAAAAACCCA +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSREQTRHR*RRLKNP
Trigger: TGGGTTTTTCAGCCTCCTGCACCGGTGTCGCGTCTG...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425933.6
ENST00000554387.5
CDS-3UTR CCA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCAGGTGGGGCCATCCTTaGAGCAGTTGTGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSRWGHP*SSCAGS
Trigger: TGAGCCAGCACAACTGCTCCAAGGATGGCCCCACCT...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAGCGTGTAGTTGGGGGTaGCCGAGTGCTTGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGACSWG*PSACES
Trigger: GCTTTCACAAGCACTCGGCCACCCCCAACTACACGC...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGCCTGGTACACCTTCTaGTCCACACACTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGAWYTF*STHSWK
Trigger: CTTCCAGGAGTGTGTGGACCAGAAGGTGTACCAGGC...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACAGCCTGGTACACCTTCTaGTCCACACACTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTAWYTF*STHSWK
Trigger: CTTCCAGGAGTGTGTGGACCAGAAGGTGTACCAGGC...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATGGATCTCCACGTGCTaGCCTGACACCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRWISTC*PDTFSV
Trigger: CACTGAGAAGGTGTCAGGCCAGCACGTGGAGATCCA...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGTGGTGCCGATGTACTTaGCCTGGATCTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGWCRCT*PGSPRA
Trigger: AGCACGTGGAGATCCAGGCCAAGTACATCGGCACCA...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp ACCCTCTGCTCACCCCAGAACCAGAGCCCTGGTTTGACTCCGCCCCTGCTGTGGTGGAAGTCGATCTGCTaGTTGAGGGGGCAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: TLCSPQNQSPGLTPPLLWWKSIC*LRGQPR
Trigger: GCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCA...CCACAGCAGGGGCGGAGTCAAACCAGGGCTCTGGTTCTGGGGTGAGCAGAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCTGGAAGTCGATCTGCTaGTTGAGGGGGCAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: LALGHGCLVWEGLGGCGCWKSIC*LRGQPR
Trigger: GCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCA...GCACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATTTGGTGTGGAAGGCCTaGAAGTCGATCTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHLVWKA*KSICWL
Trigger: CAACCAGCAGATCGACTTCCAGGCCTTCCACACCAA...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACCCCTCAGCATTGGTGTaGAAGGCCTGGAAGTCGATC +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHPSALV*KAWKSI
Trigger: GATCGACTTCCAGGCCTTCCACACCAATGCTGAGGG...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACACGGTGCCCTCAGCATTaGTGTGGAAGGCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTRCPQH*CGRPGS
Trigger: ACTTCCAGGCCTTCCACACCAATGCTGAGGGCACCG...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGCGGTGCCCTCAGCATTaGTGTGGAAGGCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSRERCPQH*CGRPGS
Trigger: ACTTCCAGGCCTTCCACACCAATGCTGAGGGCACCG...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACAGGTCTCGGGGGCTGTaGGTGCAGGGCTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHRSRGL*VQGWRL
Trigger: CAGCCGCCAGCCCTGCACCCACAGCCCCCGAGACCT...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGTCTCGGGGGCTGTaGGTGCAGGGCTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVRSRGL*VQGWRL
Trigger: CAGCCGCCAGCCCTGCACCCACAGCCCCCGAGACCT...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCAGGGCTGCACGGCTGTCTCGTATaGGAAGGTCTCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LATAVSYGKVSGAVGAGLHGCLV*EGLGGC
Trigger: ACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTG...CAGCCCTGCACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACAGCTTCTCCTTGCACTTaGCCACGGCTGTCTCGTATG +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTASPCT*PRLSRM
Trigger: CATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGC...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GTCCCAGTCCTCCACAGCATTGACCACTTCCTCTGGCATGCGGACGGCAAAGGTCCGTGCCTGAGCCCTTaGCAGCAGGCGGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: VPVLHSIDHFLWHADGKGPCLSP*QQAVPG
Trigger: GCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGG...ACCTTTGCCGTCCGCATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACTGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAGCGGGCACGACCTACTaGCCAAAAGGTTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTAGTTY*PKGSSS
Trigger: ACTGCTGGAACCTTTTGGCCAGTAGGTCGTGCCCGC...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCTCTCTCCTGGCTGTGTaGCCACAGGGCTTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEASLLAV*PQGLRE
Trigger: TTCCCTTAAGCCCTGTGGCCACACAGCCAGGAGAGA...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGTCTCTCCTGGCTGTGTaGCCACAGGGCTTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGSLLAV*PQGLRE
Trigger: TTCCCTTAAGCCCTGTGGCCACACAGCCAGGAGAGA...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCGGGGCTGCCGATGGGTaGGTAGGGTGTGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGGAADG*VGCGAV
Trigger: TACAGCTCCACACCCTACCCACCCATCGGCAGCCCC...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGGGGAGCAGGACCTCTTaGAGGGAGGGGGAGACACAC +
Preference number: 4 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGGSRTS*REGETH
Trigger: GTGTGTCTCCCCCTCCCTCCAAGAGGTCCTGCTCCC...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCGCCCACACACGGTTCTaGCAGAGGGAGCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGAHTRF*QREQDL
Trigger: GAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGC...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCTGTCCGGCTCTGCATaGCTTGTTCCTGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: PRGRSQPTHGEAERTEPALSGSA*LVPEIH
Trigger: ATGAATTTCAGGAACAAGCCATGCAGAGCCGGACAG...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCGGTATACACGTGCCATaGTGGTTTGCTGCACCTATG +
Preference number: 4 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGGIHVP*WFAAPM
Trigger: CATAGGTGCAGCAAACCACCATGGCACGTGTATACC...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCTTTCCCAGGGGACAATaGGAACTTCCACGGAATGAG +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLFPRGQ*ELPRNE
Trigger: CTCATTCCGTGGAAGTTCCCATTGTCCCCTGGGAAA...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCACGGTGCCCTCGAGGTaGTCAGTAACGGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGTVPSR*SVTGGL
Trigger: CAGCCCTCCCGTTACTGACCACCTCGAGGGCACCGT...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAAGGAAATGGTCAGCTTaGAGGAACGGTGCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGRKWSA*RNGALE
Trigger: CTCGAGGGCACCGTTCCTCCAAGCTGACCATTTCCT...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCTGGAGTGGGTCAGTTaGCTTCTCTTTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLLEWVS*LLFASV
Trigger: GACAGAAGCAAAGAGAAGCCAACTGACCCACTCCAG...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTGCTCTGGCCCCGCAGACCTaGTCCCTGGTGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: PVTVASHHPLNSPFAAAALAPQT*SLVVPA
Trigger: GGCCGGGACCACCAGGGACCAGGTCTGCGGGGCCAG...AGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCTCAGACACAGCCTGTaGCTTAAGATGAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: GGPSPHMGKPRGRSPRLPLRHSL*LKMRVR
Trigger: TCTGACCCTCATCTTAAGCCACAGGCTGTGTCTGAG...AGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp AGCTCGCGACGGGTTGAGCCAGTTTTGACGCCAAGTTaGCCTGCAGCCCGAGCCCAAGTGCCACCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSRRVEPVLTPS*PAARAQVPPLL
Trigger: GAGCAGGGGTGGCACTTGGGCTCGGGCTGCAGGCAAACTTGGCGTCAAAACTGGCTCAACCCGTCGCGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp GCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCACGGGGAGGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: AWLPDVALQNSE*HLRILHGEVGR
Trigger: CCTACCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR CAA 72 bp CCCACCTGGCGCACCACGATGGTGGTGCCGATGTACTaGGCCTGGATCTCCACGTGCTGGCCTGACACCTTC +
Preference number: 4 (lower is better)
Translates to: PTWRTTMVVPMY*AWISTCWPDTF
Trigger: GAAGGTGTCAGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR TCA 90 bp CTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTCCAGAATCCCAGGGCTaGACGTCCTGCCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLLALGHGCLVWEGLGGCPESQG*TSCPSP
Trigger: GGGAGAGGGGCAGGACGTTCAGCCCTGGGATTCTGG...ACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR TCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGTAATTATTGTCGATaGGCGGCCAGGCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMGNYCR*AARRPA
Trigger: TGCAGGGCGCCTGGCCGCTCATCGACAATAATTACC...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGCACAGGCGTGTTGGTaGCCTGCACGTTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSREAQACW*PARSGN
Trigger: ATTACCTGAACGTGCAGGTCACCAACACGCCTGTGC...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGCTGACACCTTCTCAGTaGTCTTCAGGCTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGLTPSQ*SSGCWP
Trigger: GGGCCAACAGCCTGAAGATCACTGAGAAGGTGTCAG...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACACTGACACCTTCTCAGTaGTCTTCAGGCTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTLTPSQ*SSGCWP
Trigger: GGGCCAACAGCCTGAAGATCACTGAGAAGGTGTCAG...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGCTGACACCTTCTCAGTaGTCTTCAGGCTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRLTPSQ*SSGCWP
Trigger: GGGCCAACAGCCTGAAGATCACTGAGAAGGTGTCAG...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCAGTCCTCCACAGCATTaGCCACTTCCTCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSSPPQH*PLPLAC
Trigger: GCATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACT...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAGAAGAGATTAGAGGTTaGAGACCCTGCCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGEEIRG*RPCQGC
Trigger: GCATCCCTGGCAGGGTCTTCAACCTCTAATCTCTTC...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGCTGCACTTTTGGGAGTaGAGCCTGGCTTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGLHFWE*SLALCC
Trigger: ACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAG...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGGACACGTGGACGCAGTaGGGGGTCCCCACTTCCAAG +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGDTWTQ*GVPTSK
Trigger: CTTGGAAGTGGGGACCCCTCACTGCGTCCACGTGTC...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGTATGTACACGCGGTaGCACTCCACACAGGTCGCA +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGSMYTR*HSTQVA
Trigger: TGCGACCTGTGTGGAGTGTCACCGCGTGTACATACT...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCAACAGACGTCTCGCTTaGGCCCAGGAGTTCAAGATC +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEANRRLA*AQEFKI
Trigger: GATCTTGAACTCCTGGGCTCAAGCGAGACGTCTGTT...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGATTGGGTATTTCTCCTaGTGCTCTCCCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSREIGYFS*CSPSPS
Trigger: GCTGGGGGAGGGAGAGCATCAGGAGAAATACCCAAT...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGTCCTGGGTGTGTCTGTaGGGCTGTCGCCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRSWVCL*GCRQRK
Trigger: TTTCCTTTGGCGACAGCCTCACAGACACACCCAGGA...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTCTCGCCCCAGCCTTGACCTaGGGGCCACTCAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: PTDRPQCVMFPSLCPCVLAPALT*GPLSGP
Trigger: AGGGCCGCTGAGTGGCCCTCAGGTCAAGGCTGGGGC...GAGAACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GGAGCGCCCCGCCCCAGCTCGTTCTCTGCCCTCAAGCGAGGAGTAGGTGGGCGCGGCTTTGCGCCAGTATaGGCTTATGTAGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GAPRPSSFSALKRGVGGRGFAPV*AYVVLP
Trigger: GGGAAGAACTACATAAGCTCATACTGGCGCAAAGCC...GCGCCCACCTACTCCTCGCTTGAGGGCAGAGAACGAGCTGGGGCGGGGCGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAGGGCTTCAGTATGGTaGCCTTTCCTAACTCTGTCG +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWRASVW*PFLTLS
Trigger: CGACAGAGTTAGGAAAGGTCACCATACTGAAGCCCT...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR GCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCGTAGCTGCGCAAGGCTaGACAGAACTCGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGVAAQG*TELGGV
Trigger: GACACCCCCGAGTTCTGTGCAGCCTTGCGCAGCTAC...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGGGGCCGTCCGCCGCGTaGACAGGGCGTAGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQGPSAA*TGRSCA
Trigger: TGCGCAGCTACGCCCTGTGCACGCGGCGGACGGCCC...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGTCCTTGGAGCAGTTGTaGTGGCTCATGAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGSLEQL*WLMRSS
Trigger: AGAGGACCTCATGAGCCAGCACAACTGCTCCAAGGA...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACTCCTTGGAGCAGTTGTaGTGGCTCATGAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHSLEQL*WLMRSS
Trigger: AGAGGACCTCATGAGCCAGCACAACTGCTCCAAGGA...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACGTGCGCAGGCGTGGCTaGGAGGTGGGGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHVRRRG*EVGPSL
Trigger: CAAGGATGGCCCCACCTCGCAGCCACGCCTGCGCAC...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGCCTGGATCTCCACGTaGTGGCCTGACACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHAWIST*WPDTFS
Trigger: TGAGAAGGTGTCAGGCCAGCACGTGGAGATCCAGGC...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GTGGAAGGCCTGGAAGTCGATCTGCTGGTTGAGGGGGCAGCCCCGCAGGCAGAGGCCTGGATCTCCACGTaGTGGCCTGACACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VEGLEVDLLVEGAAPQAEAWIST*WPDTFS
Trigger: TGAGAAGGTGTCAGGCCAGCACGTGGAGATCCAGGC...CTCTGCCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR GCA 90 bp GTGGAAGGCCTGGAAGTCGATCTGCTGGTTGAGGGGGCAGCCCCGCAGGCAGAGGCACCACGATGGTGGTaGCGATGTACTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VEGLEVDLLVEGAAPQAEAPRWW*RCTWPG
Trigger: TCCAGGCCAAGTACATCGGCACCACCATCGTGGTGC...CTCTGCCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR GCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGCCACTTCCTCTGGCATaGGGACGGCAAAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMPLPLA*GRQRSG
Trigger: ACCTGACCTTTGCCGTCCGCATGCCAGAGGAAGTGG...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp AGCTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGCCTGCGGGCACCGGTaGCCTCAGCATTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: SFSLHLATAVSYGKVSGAACGHR*PQHWCG
Trigger: TCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGC...AGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR GCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGTGGCGGCTGCCAGCCTaGGGGCACCGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQWRLPA*GHRCPQ
Trigger: CTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGCCA...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACGTCTGGCGGCTGCCAGCCTaGGGGCACCGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: EHLDILQRVVGGQCEVHVWRLPA*GHRCPQ
Trigger: CTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGCCA...GACGTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR GCA 90 bp GTGGAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACTGCAGGGCTGGCGGCTaGCAGCCTGCGGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: VEHLDILQRVVGGQCEVHCRAGG*QPAGTG
Trigger: ACCGGTGCCCGCAGGCTGGCAGCCGCCAGCCCTGCA...GTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR GCA 90 bp ATTGGTGTGGAAGGCCTGGAAGTCGATCTGCTGGTTGAGGGGGCAGCCCCGCAGGTAAGAGTGTGTGCGTaGGTGTGGCGGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: IGVEGLEVDLLVEGAAPQVRVCA*VWRAQG
Trigger: CCCCTGTGCCCGCCACACGCACGCACACACTCTTAC...CTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCACACCAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR GCA 90 bp GTGGAAGGCCTGGAAGTCGATCTGCTGGTTGAGGGGGCAGCCCCGCAGGCAGAGTCGTGTAAGAGTGTGTaGGTGCGTGTGGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: VEGLEVDLLVEGAAPQAESCKSV*VRVAGT
Trigger: TGTGCCCGCCACACGCACGCACACACTCTTACACGA...CTCTGCCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR GCA 90 bp AGCTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGCCAAGCCCCAAGGATaGCTCCCTGTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SFSLHLATAVSYGKVSGAAKPQG*LPVWLG
Trigger: CCCCAGCCACACAGGGAGGCATCCTTGGGGCTTGGC...AGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR GCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGAGAGTCCTAAGACCCTaGTCCTCTCCCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGRVLRP*SSPQTP
Trigger: TGGAGTCTGGGGAGAGGAGCAGGGTCTTAGGACTCT...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCTCTCTCTGGGAGCCCTaGAAGAACAGGGCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRSLWEP*KNRALE
Trigger: TTCTAAAGCCCTGTTCTTGCAGGGCTCCCAGAGAGA...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAGTGGCATGCAGGAGCTaGCCCATGGACATTGCCTTA +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGVACRS*PMDIAL
Trigger: TAAGGCAATGTCCATGGGGCAGCTCCTGCATGCCAC...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGGTTTCCTTGACGGGGTaGTTTGGGGACTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGVSLTG*FGDCCF
Trigger: GAAGCAGCAGTCCCCAAAGCACCCCGTCAAGGAAAC...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATGGCCGCCGCGCTGCATaGATTACATTTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDGRRAA*ITFHLQ
Trigger: CTGAAGATGAAATGTAATGCATGCAGCGCGGCGGCC...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTCCCCAGCTCGTTCTCTaGCCTCAAGCGAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RAAVGRAFQCIARGKELTPQLVL*PQARSR
Trigger: CCTACTCCTCGCTTGAGGGCAGAGAACGAGCTGGGG...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGCCTGTCACCACCTCATaGAATGGCTTTCCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRPVTTS*NGFPCG
Trigger: ACCGCAGGGAAAGCCATTGCATGAGGTGGTGACAGG...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGGCTGTCTCCGGCCGGTaGGAGCGTGCGCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQAVSGR*ERAQAW
Trigger: CCACGCCTGCGCACGCTCCCACCGGCCGGAGACAGC...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCGTGTAGTTGGGGGTaGCCGAGTGCTTGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGACSWG*PSACES
Trigger: GCTTTCACAAGCACTCGGCCACCCCCAACTACACGC...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGCGTGTAGTTGGGGGTaGCCGAGTGCTTGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMACSWG*PSACES
Trigger: GCTTTCACAAGCACTCGGCCACCCCCAACTACACGC...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGTGCACCTTGCAGGTCTaGAAGCGGTCGGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGCTLQV*KRSVKV
Trigger: GACTTTCACCGACCGCTTCCAGACCTGCAAGGTGCA...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGATCTCCACGTGCTaGCCTGACACCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTWISTC*PDTFSV
Trigger: CACTGAGAAGGTGTCAGGCCAGCACGTGGAGATCCA...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTCCTGGCGCACCACGATaGTGGTGCCGATGTACTTGG +
Preference number: 4 (lower is better)
Translates to: RAAVGRAFQCIARGKELTPGAPR*WCRCTW
Trigger: CCAAGTACATCGGCACCACCATCGTGGTGCGCCAGG...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGCCTGGCGCACCACGATaGTGGTGCCGATGTACTTGG +
Preference number: 4 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGPGAPR*WCRCTW
Trigger: CCAAGTACATCGGCACCACCATCGTGGTGCGCCAGG...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACTTGGTGTGGAAGGCCTaGAAGTCGATCTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHLVWKA*KSICWL
Trigger: CAACCAGCAGATCGACTTCCAGGCCTTCCACACCAA...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACATTGGTGTGGAAGGCCTaGAAGTCGATCTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTLVWKA*KSICWL
Trigger: CAACCAGCAGATCGACTTCCAGGCCTTCCACACCAA...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGACCCTCAGCATTGGTGTaGAAGGCCTGGAAGTCGATC +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGPSALV*KAWKSI
Trigger: GATCGACTTCCAGGCCTTCCACACCAATGCTGAGGG...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGCGGTGCCCTCAGCATTaGTGTGGAAGGCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMRCPQH*CGRPGS
Trigger: ACTTCCAGGCCTTCCACACCAATGCTGAGGGCACCG...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGCTTCTCCTTGCACTTaGCCACGGCTGTCTCGTATG +
Preference number: 4 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRASPCT*PRLSRM
Trigger: CATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGC...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAGCTTCTCCTTGCACTTaGCCACGGCTGTCTCGTATG +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTASPCT*PRLSRM
Trigger: CATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGC...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GCTGCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGCCTGGAAGGCTTCTCCTTGCACTTaGCCACGGCTGTCTCGTATG +
Preference number: 4 (lower is better)
Translates to: AASLRAPVPSALVWKAWKASPCT*PRLSRM
Trigger: CATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGC...CTTCCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGCTTCTCCTTGCACTTaGCCACGGCTGTCTCGTATG +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSREASPCT*PRLSRM
Trigger: CATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGC...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp TCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCCCACACACGGTTCTaGCAGAGGGAGCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: SLHLATAVSYGKVSGAVGAHTRF*QREQDL
Trigger: GAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGC...ACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATCTCCATGCCACTTGCTaGCACAGCTCTGATGACTGT +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDLHATC*HSSDDC
Trigger: ACAGTCATCAGAGCTGTGCCAGCAAGTGGCATGGAG...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCGTGAACGGCTTCCTCTaGCAACTGGAGTCAAACATC +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAVNGFL*QLESNI
Trigger: GATGTTTGACTCCAGTTGCCAGAGGAAGCCGTTCAC...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGATGCCGATTCAGAAGGTaGTGGTTTCCCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: RQEICTPWAVPAHTWGSRCRFRR*WFPRGQ
Trigger: TTGTCCCCTGGGAAACCACCACCTTCTGAATCGGCA...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCGTCTTTGTTCTTCTCTaGGCAGATCTGCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAVFVLL*ADLLGQ
Trigger: CTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGAC...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCGCCCTTCCTTCGGTCTaGGTGTGTCTGTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGALPSV*VCLCPC
Trigger: GCATGGGCACAGACACACCCAGACCGAAGGAAGGGC...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GTGCCCTCGAGGTGGTCAGTAACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACCATGGCTGGGCGAGCTaGGCAGTGGGTGACTGGCAG +
Preference number: 4 (lower is better)
Translates to: VPSRWSVTGGLKRTAASYHGWAS*AVGDWQ
Trigger: CTGCCAGTCACCCACTGCCCAGCTCGCCCAGCCATG...GTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTTACTGACCACCTCGAGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGGGGTGGCGTGGCATGCAGGAGCTGCCCCATGGACATTGCCTTAATGAACGAACTCCCAGTGGGGGCCTaGCCCCACCCTCTGCTCACC +
Preference number: 4 (lower is better)
Translates to: RGGVACRSCPMDIALMNELPVGA*PHPLLT
Trigger: GGTGAGCAGAGGGTGGGGCCAGGCCCCCACTGGGAG...TTCGTTCATTAAGGCAATGTCCATGGGGCAGCTCCTGCATGCCACGCCACCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTCTCCAGTCAGCCTCCCAGTaGGGGCCTGGCCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: PTDRPQCVMFPSLCPCVLQSASQ*GPGPTL
Trigger: GAGGGTGGGGCCAGGCCCCCACTGGGAGGCTGACTG...GAGAACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGGGTAATTATTGTCGATaGGCGGCCAGGCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGGNYCR*AARRPA
Trigger: TGCAGGGCGCCTGGCCGCTCATCGACAATAATTACC...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGCACAGGCGTGTTGGTaGCCTGCACGTTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHAQACW*PARSGN
Trigger: ATTACCTGAACGTGCAGGTCACCAACACGCCTGTGC...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATCTCCACGTGCTGGCCTaGCACCTTCTCAGTGATCTT +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHLHVLA*HLLSDL
Trigger: AAGATCACTGAGAAGGTGTCAGGCCAGCACGTGGAG...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp CAAGTCCACTCAAGAAGGCGGTTGCCGGAGTTTTCCTGCTCCACCCTGGGGAGGAGTAGGCGGCCAGTGTaGAGTTCACGTCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: QVHSRRRLPEFSCSTLGRSRRPV*SSRRPW
Trigger: CCACGGGCGACGTGAACTTCACACTGGCCGCCTACT...CCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGTGGAGTGGAGCATCTTaGCATCCTCCAACGCGTAGT +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSREWSGAS*HPPTRS
Trigger: ACTACGCGTTGGAGGATGTCAAGATGCTCCACTCCA...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR TCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGAAGAGATTAGAGGTTaGAGACCCTGCCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSREEEIRG*RPCQGC
Trigger: GCATCCCTGGCAGGGTCTTCAACCTCTAATCTCTTC...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGCTCCTGGCCAGTGTATaGGAGGTCCCTGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGLLASV*EVPGEQ
Trigger: CTGTTCCCCAGGGACCTCTCATACACTGGCCAGGAG...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGCCCGTCCTGCAAGATaGAGCTGCTTCTTGGGAATC +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHARPAR*SCFLGI
Trigger: GATTCCCAAGAAGCAGCTTCATCTTGCAGGACGGGC...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCCACCTGGCGCACCACGATGGTGGTGCCGATGTACTTGGCCTGGATCTCCACGAGGCTGTTGGCCCCGTaGTTGTCCCCACCGTTCTTA +
Preference number: 4 (lower is better)
Translates to: PTWRTTMVVPMYLAWISTRLLAP*LSPPFL
Trigger: TAAGAACGGTGGGGACAAGCACGGGGCCAACAGCCT...CGTGGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR GCA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTGCCTGGATCTCCACGTaGTGGCCTGACACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RAAVGRAFQCIARGKELTAWIST*WPDTFS
Trigger: TGAGAAGGTGTCAGGCCAGCACGTGGAGATCCAGGC...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACGCCTGCGGGCACCGGTaGCCTCAGCATTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHACGHR*PQHWCG
Trigger: TCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGC...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGCCGGCAGCTTCTCCTTaGACTTGGCCACGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGPAASP*TWPRLS
Trigger: AGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGG...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGTCGTGTAAGAGTGTGTaGGTGCGTGTGGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGSCKSV*VRVAGT
Trigger: TGTGCCCGCCACACGCACGCACACACTCTTACACGA...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTCTGAAAACCGGGACCTaGACTGGTACCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: RAAVGRAFQCIARGKELTLKTGT*TGTHSS
Trigger: GCTGCTGTGGGTACCAGTGCAGGTCCCGGTTTTCAG...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGAGACCCTGCCAGGGATaGTCAGAGCTGAGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMRPCQG*SELRVL
Trigger: TAGGACTCTCAGCTCTGAGCATCCCTGGCAGGGTCT...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATAGACCCTGCCAGGGATaGTCAGAGCTGAGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHRPCQG*SELRVL
Trigger: TAGGACTCTCAGCTCTGAGCATCCCTGGCAGGGTCT...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GGGAGTCATCCCAGATCTCAGGCTATCCCACCCATCTCATCCCAGAGGGCACCATGGACAGCAGCCTCCTaGAGCACCACTGCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: GSHPRSQAIPPISSQRAPWTAAS*STTAPP
Trigger: GGGCGGAGCAGTGGTGCTGCAGGAGGCTGCTGTCCA...TGGTGCCCTCTGGGATGAGATGGGTGGGATAGCCTGAGATCTGGGATGACTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGCTTAAACTCCCCCTTTaGTGCTGCTGCTCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRLKLPL*CCCSRA
Trigger: AGCCCTAGAGCAGCAGCAGCAAAGGGGGAGTTTAAG...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATACTGTTTCTTCAAGATaGCCTCTCCCCAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDTVSSR*PLPSSG
Trigger: GCCAGAACTGGGGAGAGGGCATCTTGAAGAAACAGT...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCGCTTCTTTTAATAGCTaGGGGGAAGCTGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAASFNS*GEAAEK
Trigger: CTTCTCTGCAGCTTCCCCGCAGCTATTAAAAGAAGC...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGCCCTCGAGGTGGTCAGTAACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACCGTGGCTGCCCGACGTaGCGCTCCAGAACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VPSRWSVTGGLKRTAASYRGCPT*RSRTQS
Trigger: ACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACG...GTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTTACTGACCACCTCGAGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGGGCGTGGCTGCGAGGTaGGGCCATCCTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVGVAAR*GHPWSS
Trigger: ACTGCTCCAAGGATGGCCCCACCTCGCAGCCACGCC...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGATGCACCTTGCAGGTCTaGAAGCGGTCGGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGCTLQV*KRSVKV
Trigger: GACTTTCACCGACCGCTTCCAGACCTGCAAGGTGCA...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGTGGATCTCCACGTGCTaGCCTGACACCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMWISTC*PDTFSV
Trigger: CACTGAGAAGGTGTCAGGCCAGCACGTGGAGATCCA...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGCCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGPMYLA*ISTCWP
Trigger: AGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGG...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGGGCGCACCACGATGGTaGTGCCGATGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGGAPRW*CRCTWP
Trigger: AGGCCAAGTACATCGGCACCACCATCGTGGTGCGCC...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGGAAGGCCTGGAAGTCGATCTGCTGGTTGAGGGGGCAGCCCCGCAGGCAGAGCCCTCAGCATTGGTGTaGAAGGCCTGGAAGTCGATC +
Preference number: 4 (lower is better)
Translates to: VEGLEVDLLVEGAAPQAEPSALV*KAWKSI
Trigger: GATCGACTTCCAGGCCTTCCACACCAATGCTGAGGG...CTCTGCCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp CGGCCCACCTGGCGCACCACGATGGTGGTGCCGATGTACTTGGCCTGGATCTCCGCTTCTCCTTGCACTTaGCCACGGCTGTCTCGTATG +
Preference number: 4 (lower is better)
Translates to: RPTWRTTMVVPMYLAWISASPCT*PRLSRM
Trigger: CATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGC...GGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGTTGTCTTTGTTGGAGTaGAGCATCTTGACATCCTCC +
Preference number: 4 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGLSLLE*SILTSS
Trigger: GGAGGATGTCAAGATGCTCCACTCCAACAAAGACAA...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CAGGCAGAGGTAGAGACCCTGGCTGTCCCAGTCCTCCACAGCATTGACCACTTCGAGATCTGCACCCCGTaGGCGGTCCCAGCCCACACA +
Preference number: 4 (lower is better)
Translates to: QAEVETLAVPVLHSIDHFEICTP*AVPAHT
Trigger: TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTC...GAAGTGGTCAATGCTGTGGAGGACTGGGACAGCCAGGGTCTCTACCTCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp AGCTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTCGTTCTGCGGGGCCATaGTGGACACGCCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: SFSLHLATAVSYGKVSGARSAGP*WTRQEI
Trigger: GATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACG...AGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCTACTGTCAAACATCATaGCACCAGTCACCACAACCT +
Preference number: 4 (lower is better)
Translates to: AVPAHTWGSREDGARASLYCQTS*HQSPQP
Trigger: AGGTTGTGGTGACTGGTGCCATGATGTTTGACAGTA...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGATCTCTCCTGGCTGTGTaGCCACAGGGCTTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGSLLAV*PQGLRE
Trigger: TTCCCTTAAGCCCTGTGGCCACACAGCCAGGAGAGA...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp AACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACTAAGAGCACACGGTGGGCCGGCGGCAAGTCTCTCCTaGCTGTGTGGCCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: NGRAEENSGQLLRAHGGPAASLS*LCGHRA
Trigger: AGCCCTGTGGCCACACAGCCAGGAGAGACTTGCCGC...CGGCCCACCGTGTGCTCTTAGTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGCTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGGGGCTGCCGATGGGTaGGTAGGGTGTGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SFSLHLATAVSYGKVSGAGAADG*VGCGAV
Trigger: TACAGCTCCACACCCTACCCACCCATCGGCAGCCCC...AGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp CGCAGCCGCCCTGCCTGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCCGTTCTGCAGCCTCCTaGCCAGTGTATGAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: RSRPAWQVPSPLIQVQFVRSAAS*PVYERS
Trigger: GGACCTCTCATACACTGGCCAGGAGGCTGCAGAACG...GACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGAAGTGACTTGCCCATaGTCACACTGCTGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHEVTCP*SHCWGG
Trigger: ACCTCCCCAGCAGTGTGACCATGGGCAAGTCACTTC...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATTGTCCTTTCCAGTCTaGTTCCTGCCTCCCAAACCC +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTLSFPV*FLPPKP
Trigger: GGGTTTGGGAGGCAGGAACCAGACTGGAAAGGACAA...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGTCTCTCGGAACCTCTaGCCCACTTCCCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSREVSRNL*PTSLFS
Trigger: AGAGAAAAGGGAAGTGGGCCAGAGGTTCCGAGAGAC...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCATACACGTGCCATGGTaGTTTGCTGCACCTATGAAC +
Preference number: 4 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAIHVPW*FAAPMN
Trigger: GTTCATAGGTGCAGCAAACCACCATGGCACGTGTAT...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCGCGTGCCTTGCACACTaGCTGCCTGCAGCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGACLAH*LPAAVY
Trigger: ATAGACAGCTGCAGGCAGCCAGTGTGCAAGGCACGC...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGCTGGGCAGATCTGCTTaGCCAGACACATTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGLGRSA*PDTFCF
Trigger: AAAGCAGAATGTGTCTGGCCAAGCAGATCTGCCCAG...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACTAAGAGCACACGGTGGGCCGGGGCGAGCTGGGCAGTaGGTGACTGGCAGGAAATGG +
Preference number: 4 (lower is better)
Translates to: NGRAEENSGQLLRAHGGPGRAGQ*VTGRKW
Trigger: CCATTTCCTGCCAGTCACCCACTGCCCAGCTCGCCC...CGGCCCACCGTGTGCTCTTAGTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCGGCCAAGGAGCAGGGTaGGCTCAGTGGATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGGQGAG*AQWMEN
Trigger: GTTTTCCATCCACTGAGCCCACCCTGCTCCTTGGCC...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp CTGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTaGAGGATCTTGCACGGGGAGGTGGGTAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LPDVALQNSELH*RILHGEVGRLG
Trigger: CCCCAACCTACCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR TCA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTGCACAGGCGTGTTGGTaGCCTGCACGTTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: RAAVGRAFQCIARGKELTAQACW*PARSGN
Trigger: ATTACCTGAACGTGCAGGTCACCAACACGCCTGTGC...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCCTGACACCTTCTCAGTaGTCTTCAGGCTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGLTPSQ*SSGCWP
Trigger: GGGCCAACAGCCTGAAGATCACTGAGAAGGTGTCAG...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCAGTCCTCCACAGCATTaGCCACTTCCTCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: LALGHGCLVWEGLGGCGCSPPQH*PLPLAC
Trigger: GCATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACT...GCACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR TCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGACTGCACTTTTGGGAGTaGAGCCTGGCTTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGLHFWE*SLALCC
Trigger: ACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAG...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCTTCCAAGCAGAACGTaGGCAAACACAACCAAAATA +
Preference number: 4 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPLPSRT*ANTTKI
Trigger: TATTTTGGTTGTGTTTGCTCACGTTCTGCTTGGAAG...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTGCTGGCCATCCAGGCCCGTaGAACACAAGGTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PVTVASHHPLNSPFAAAAGHPGP*NTRSLP
Trigger: GGGGAGGGACCTTGTGTTTCACGGGCCTGGATGGCC...AGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGGTGCGCAGGCGTGGCTaGGAGGTGGGGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQVRRRG*EVGPSL
Trigger: CAAGGATGGCCCCACCTCGCAGCCACGCCTGCGCAC...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCGGCAGCTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGAGGCTGTTGGCCCCGTaGTTGTCCCCACCGTTCTTA +
Preference number: 4 (lower is better)
Translates to: PAASPCTWPRLSRMGRSRRLLAP*LSPPFL
Trigger: TAAGAACGGTGGGGACAAGCACGGGGCCAACAGCCT...CCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR GCA 90 bp ATTGGTGTGGAAGGCCTGGAAGTCGATCTGCTGGTTGAGGGGGCAGCCCCGCAGCCACTTCCTCTGGCATaGGGACGGCAAAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: IGVEGLEVDLLVEGAAPQPLPLA*GRQRSG
Trigger: ACCTGACCTTTGCCGTCCGCATGCCAGAGGAAGTGG...CTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCACACCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR GCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGGCCTGGAAGTCGATCTaGTGGTTGAGGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVAWKSI*WLRGQP
Trigger: GGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGC...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGTCCTCTCATACAGGTaGAGTTTGTCTTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHVLSYR*SLSLLE
Trigger: CTCCAACAAAGACAAACTGCACCTGTATGAGAGGAC...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGCCGGTCCCTGGCGTTCTaGGGGGCCATGGTGGACACG +
Preference number: 4 (lower is better)
Translates to: GRSRVLSYRCSLSLLEWSRSLAF*GAMVDT
Trigger: CGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCG...GCTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR GCA 90 bp ACTGGAGTCAAACATCAAGTCCTCCCGGAGCCGGAGAGCCCTGCAGTACTTTGGCGGGGCGAGGGGAGCTaGTCTCCCTCTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: TGVKHQVLPEPESPAVLWRGEGS*SPSHTA
Trigger: AGCTGTGTGAGAGGGAGAGCAGCTCCCCTCGCCCCG...CCAAAGTACTGCAGGGCTCTCCGGCTCCGGGAGGACTTGATGTTTGACTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCGGCAGCTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGCCTTTCAGTGCATTaGGAGGGGGAAGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: PAASPCTWPRLSRMGRSRGLSVH*EGEGAD
Trigger: GTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCC...CCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR GCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGGGCCGGGCCTTTCAGTaGATTGCGAGGGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVGRAFQ*IARGKE
Trigger: CTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCC...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGGTAAGAGTGTGTGCGTaGGTGTGGCGGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVVRVCA*VWRAQG
Trigger: CCCCTGTGCCCGCCACACGCACGCACACACTCTTAC...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGCTGAAAACCGGGACCTaGACTGGTACCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGLKTGT*TGTHSS
Trigger: GCTGCTGTGGGTACCAGTGCAGGTCCCGGTTTTCAG...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGGAACAGCAGAGGGGCTaGCGATGGGTGGGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVEQQRG*RWVGRV
Trigger: CACCCTACCCACCCATCGGCAGCCCCTCTGCTGTTC...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTGGCCGCCAGGGAAGATaGTGGGTACGTTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: RAAVGRAFQCIARGKELTGRQGR*WVRFVL
Trigger: AAGGACAAAACGTACCCAGCATCTTCCCTGGCGGCC...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp AACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACTAAGAGCACACGGTGGGCCGGGTGCCAGGGCCATGTaGGAGGCCATTGACGAGTGT +
Preference number: 4 (lower is better)
Translates to: NGRAEENSGQLLRAHGGPGARAM*EAIDEC
Trigger: ACACTCGTCAATGGCCTCGCACATGGCCCTGGCACC...CGGCCCACCGTGTGCTCTTAGTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CAAGTCCACTCAAGAAGGCGGTTGCCGGAGTTTTCCTGCTCCACCCTGGGGAGGGTCTGTCTGGGTCATTaGGGTAGCCCCTCACACCCC +
Preference number: 4 (lower is better)
Translates to: QVHSRRRLPEFSCSTLGRVCLGH*GSPSHP
Trigger: GGGGTGTGAGGGGCTACCGCAATGACCCAGACAGAC...CCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGCCCACCACAGATGAATaGCCCTTCTCACCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGPTTDE*PFSPSC
Trigger: GCAGGAGGGTGAGAAGGGGCATTCATCTGTGGTGGG...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGCTTACACTGGTGGTTTaGCAGGGGCTCTCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGLTLVV*QGLSGL
Trigger: AAGGCCCGAGAGCCCCTGGCAAACCACCAGTGTAAG...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGATTGGATTGGAGGATaGAAAGTATCGTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHDWIGG*KVSFLG
Trigger: ACCCAGGAACGATACTTTGCATCCTCCAATCCAATC...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp AACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACTAAGAGCACACGGTGGGCCGTGGGAGACACAGGTATaGGAGGGCGGAGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: NGRAEENSGQLLRAHGGPWETQV*EGGGWT
Trigger: AGTCCACCCTCCGCCCTCGCATACCTGTGTCTCCCA...CGGCCCACCGTGTGCTCTTAGTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACAACCAGGGTAATAAACTaGCACAAGCCCCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTTRVIN*HKPLLC
Trigger: ACAGAGAAGGGGCTTGTGGCAGTTTATTACCCTGGT...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGCTTTGGGGACTGCTaGTTCCCATATTGCCAACTG +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTCFGDC*FPYCQL
Trigger: CAGTTGGCAATATGGGAAGCAGCAGTCCCCAAAGCA...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGGCCACTCAGCGGCCCTaGTCATCAAACCGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGATQRP*SSNRSD
Trigger: ATCAGAGCGGTTTGATGAGCAGGGCCGCTGAGTGGC...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCGGCAGCTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGCAGACGCGACACCGGTaGAGGAGGCTGAAAAACCCA +
Preference number: 4 (lower is better)
Translates to: PAASPCTWPRLSRMGRSRQTRHR*RRLKNP
Trigger: TGGGTTTTTCAGCCTCCTGCACCGGTGTCGCGTCTG...CCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCGCCTGGTACACCTTCTaGTCCACACACTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGAWYTF*STHSWK
Trigger: CTTCCAGGAGTGTGTGGACCAGAAGGTGTACCAGGC...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp ACCCTCTGCTCACCCCAGAACCAGAGCCCTGGTTTGACTCCGCCCCTGCTGTGGTGGTGCCGATGTACTTaGCCTGGATCTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: TLCSPQNQSPGLTPPLLWWCRCT*PGSPRA
Trigger: AGCACGTGGAGATCCAGGCCAAGTACATCGGCACCA...CCACAGCAGGGGCGGAGTCAAACCAGGGCTCTGGTTCTGGGGTGAGCAGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGTGGTGCCGATGTACTTaGCCTGGATCTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGWCRCT*PGSPRA
Trigger: AGCACGTGGAGATCCAGGCCAAGTACATCGGCACCA...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTTGGTGCCGATGTACTTaGCCTGGATCTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: RAAVGRAFQCIARGKELTWCRCT*PGSPRA
Trigger: AGCACGTGGAGATCCAGGCCAAGTACATCGGCACCA...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCTGGTGCCGATGTACTTaGCCTGGATCTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: LALGHGCLVWEGLGGCGCWCRCT*PGSPRA
Trigger: AGCACGTGGAGATCCAGGCCAAGTACATCGGCACCA...GCACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACTGGAAGTCGATCTGCTaGTTGAGGGGGCAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHWKSIC*LRGQPR
Trigger: GCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCA...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATTTGGTGTGGAAGGCCTaGAAGTCGATCTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHLVWKA*KSICWL
Trigger: CAACCAGCAGATCGACTTCCAGGCCTTCCACACCAA...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGCCCTCAGCATTGGTGTaGAAGGCCTGGAAGTCGATC +
Preference number: 4 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGPSALV*KAWKSI
Trigger: GATCGACTTCCAGGCCTTCCACACCAATGCTGAGGG...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCGCTTCTCCTTGCACTTaGCCACGGCTGTCTCGTATG +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGASPCT*PRLSRM
Trigger: CATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGC...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGTTGTCTTTGTTGGAGTaGAGCATCTTGACATCCTCC +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWLSLLE*SILTSS
Trigger: GGAGGATGTCAAGATGCTCCACTCCAACAAAGACAA...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCTTGTCTTTGTTGGAGTaGAGCATCTTGACATCCTCC +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRLSLLE*SILTSS
Trigger: GGAGGATGTCAAGATGCTCCACTCCAACAAAGACAA...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CCA 90 bp CCACCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTTCAGGGCAGGCCAGCTaGCCCCATCCACTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PPTDRPQCVMFPSLCPCVSGQAS*PHPLGL
Trigger: GAGACCCAGTGGATGGGGCCAGCTGGCCTGCCCTGA...AACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGGGGAGCAGGACCTCTTaGAGGGAGGGGGAGACACAC +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVGSRTS*REGETH
Trigger: GTGTGTCTCCCCCTCCCTCCAAGAGGTCCTGCTCCC...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAAGCCAGGATGTAGGCTaGCTTAACTGTGCTGCTATT +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGSQDVG*LNCAAI
Trigger: AATAGCAGCACAGTTAAGCCAGCCTACATCCTGGCT...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp ACTGGAGTCAAACATCAAGTCCTCCCGGAGCCGGAGAGCCCTGCAGTACTTTGGGGAGGCGGCCACTTTTaGCGGCCTCCATGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: TGVKHQVLPEPESPAVLWGGGHF*RPPCVV
Trigger: CACCACGCATGGAGGCCGCCAAAAGTGGCCGCCTCC...CCAAAGTACTGCAGGGCTCTCCGGCTCCGGGAGGACTTGATGTTTGACTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAGTTCAAGATCAGCCTaGGAAAACAGCAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWSSRSA*ENSKIL
Trigger: CAGGATCTTGCTGTTTTCCCAGGCTGATCTTGAACT...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAGCAGGGTGGGCTCAGTaGATGGAAAACCTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGAGWAQ*MENLLR
Trigger: TCTTAAGAGGTTTTCCATCCACTGAGCCCACCCTGC...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp CTCTGTGGCCTCACCTGGGACCCCTGGTCTGTCCACTaGCTACTGTCCAGTGACAGTGGCTTCCCACCATCC +
Preference number: 4 (lower is better)
Translates to: LCGLTWDPWSVH*LLSSDSGFPPS
Trigger: GGATGGTGGGAAGCCACTGTCACTGGACAGTAGCAAGTGGACAGACCAGGGGTCCCAGGTGAGGCCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp ACCCTCTGCTCACCCCAGAACCAGAGCCCTGGTTTGACTCCGCCCCTGCTGTGGGAAGAGATTAGAGGTTaGAGACCCTGCCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: TLCSPQNQSPGLTPPLLWEEIRG*RPCQGC
Trigger: GCATCCCTGGCAGGGTCTTCAACCTCTAATCTCTTC...CCACAGCAGGGGCGGAGTCAAACCAGGGCTCTGGTTCTGGGGTGAGCAGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACGTCGCCATGAGCACCCTGGGCTaGAATGAGGCGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HLDILQRVVGGQCEVHVAMSTLG*NEAGAS
Trigger: GCTGGCTCCCGCCTCATTTCAGCCCAGGGTGCTCAT...GGCGACGTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR TCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGGTAGTTTGTACAGATaGAATGTGATCACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGGSLYR*NVITAA
Trigger: GGCAGCTGTGATCACATTTCATCTGTACAAACTACC...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGTCGGCAACACATCAGTaGGACAGGATGGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVSATHQ*DRMGRG
Trigger: TCCCCGCCCCATCCTGTCTCACTGATGTGTTGCCGA...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GTGCCCTCGAGGTGGTCAGTAACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACACAGGCCCCAGTGTGTaGTGTTCCCTTCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: VPSRWSVTGGLKRTAASYTGPSV*CSLPCV
Trigger: GACACAGGGAAGGGAACATCACACACTGGGGCCTGT...GTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTTACTGACCACCTCGAGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCTTTCTGGACCATACCTaGGATTTGCACACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEAFLDHT*DLHTGK
Trigger: CTTTCCTGTGTGCAAATCTCAGGTATGGTCCAGAAA...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGTCCCCAGACAGTGTCTaGACACGTCTTTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSRESPDSV*TRLCSS
Trigger: AGAAGAACAAAGACGTGTTCAGACACTGTCTGGGGA...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGGCGCCCTGCACCTTaGAGGTCTGGAAGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRRRPAP*RSGSGR
Trigger: CCGACCGCTTCCAGACCTGCAAGGTGCAGGGCGCCT...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACGTCAGCGGCCAGGCGCCCTaGACCTTGCAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: EHLDILQRVVGGQCEVHVSGQAP*TLQVWK
Trigger: CTTCCAGACCTGCAAGGTGCAGGGCGCCTGGCCGCT...GACGTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR GCA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAGTCCTCTCATACAGGTaGAGTTTGTCTTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGVLSYR*SLSLLE
Trigger: CTCCAACAAAGACAAACTGCACCTGTATGAGAGGAC...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATGTCCTCTCATACAGGTaGAGTTTGTCTTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDVLSYR*SLSLLE
Trigger: CTCCAACAAAGACAAACTGCACCTGTATGAGAGGAC...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp AGTGCTTGTGAAAGCTCTTCTCGTAATGGCAGATCTCGGGGCTGTCCGAGCGCTACACGCCAGGAGATCTaGACCCCGTGGGCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SACESSSRNGRSRGCPSATRQEI*TPWAVP
Trigger: TGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT...AGCGCTCGGACAGCCCCGAGATCTGCCATTACGAGAAGAGCTTTCACAAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR GCA 90 bp ACTGGAGTCAAACATCAAGTCCTCCCGGAGCCGGAGAGCCCTGCAGTACTTTGGGGCCGGGCCTTTCAGTaGATTGCGAGGGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TGVKHQVLPEPESPAVLWGRAFQ*IARGKE
Trigger: CTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCC...CCAAAGTACTGCAGGGCTCTCCGGCTCCGGGAGGACTTGATGTTTGACTCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGCCTCCAGGGCCTGGCTaGACTTTTGGGAGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVPPGPG*TFGSEA
Trigger: GGCTTCACTCCCAAAAGTGCAGCCAGGCCCTGGAGG...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GATCACAGCCCTCATTCCGGAACGCCACTGACATTACGAGCGTGCCTTGCACACGACGCCAAGTTTGCCTaGAGCCCGAGCCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: DHSPHSGTPLTLRACLAHDAKFA*SPSPSA
Trigger: GGCACTTGGGCTCGGGCTGCAGGCAAACTTGGCGTC...GTGTGCAAGGCACGCTCGTAATGTCAGTGGCGTTCCGGAATGAGGGCTGTGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TCTGGAGCCCGGGCCCTTCCTTCGGTCTGGGTGTGTCTGTGCCCATGCCACTGTCCTGGTCTGTCCACTTaGTACTGTCCAGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: SGARALPSVWVCLCPCHCPGLST*YCPVTV
Trigger: CACTGTCACTGGACAGTAGCAAGTGGACAGACCAGG...ACAGTGGCATGGGCACAGACACACCCAGACCGAAGGAAGGGCCCGGGCTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAACTCCTCTTGTTTTATaGAACCAACACCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGTPLVL*NQHPPW
Trigger: CCAGGGTGGGTGTTGGTTGCATAAAACAAGAGGAGT...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCAGACTACGACCAGCCACATCGGGGGTGGCCTACAAATGTTTGTGCCAGGAAGTCTTGCACGGGGAGGTaGCTGCGGGGAAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PDYDQPHRGWPTNVCARKSCTGR*LRGSCR
Trigger: TCTGCAGCTTCCCCGCAGCCACCTCCCCGTGCAAGA...CTTCCTGGCACAAACATTTGTAGGCCACCCCCGATGTGGCTGGTCGTAGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACTAAGAGCACACGGTGGGCCGCACAGTGCGTGTAGTTaGGGGTGGCCGAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: NGRAEENSGQLLRAHGGPHSACS*GWPSAC
Trigger: ACAAGCACTCGGCCACCCCCAACTACACGCACTGTG...CGGCCCACCGTGTGCTCTTAGTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGTGCACCTTGCAGGTCTaGAAGCGGTCGGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGCTLQV*KRSVKV
Trigger: GACTTTCACCGACCGCTTCCAGACCTGCAAGGTGCA...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGGCCTGGTACACCTTCTaGTCCACACACTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGAWYTF*STHSWK
Trigger: CTTCCAGGAGTGTGTGGACCAGAAGGTGTACCAGGC...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCCTGGTACACCTTCTaGTCCACACACTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLHLATAVSYGKVSGAVGAWYTF*STHSWK
Trigger: CTTCCAGGAGTGTGTGGACCAGAAGGTGTACCAGGC...ACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp ATTGGTGTGGAAGGCCTGGAAGTCGATCTGCTGGTTGAGGGGGCAGCCCCGCAGTGGATCTCCACGTGCTaGCCTGACACCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: IGVEGLEVDLLVEGAAPQWISTC*PDTFSV
Trigger: CACTGAGAAGGTGTCAGGCCAGCACGTGGAGATCCA...CTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCACACCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp CCGGCAGCTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGTGGTGCCGATGTACTTaGCCTGGATCTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: PAASPCTWPRLSRMGRSRWCRCT*PGSPRA
Trigger: AGCACGTGGAGATCCAGGCCAAGTACATCGGCACCA...CCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACCCTGGCGCACCACGATaGTGGTGCCGATGTACTTGG +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHPGAPR*WCRCTW
Trigger: CCAAGTACATCGGCACCACCATCGTGGTGCGCCAGG...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGCCCTCAGCATTGGTGTaGAAGGCCTGGAAGTCGATC +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGPSALV*KAWKSI
Trigger: GATCGACTTCCAGGCCTTCCACACCAATGCTGAGGG...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGATACTGTCAAACATCATaGCACCAGTCACCACAACCT +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGYCQTS*HQSPQP
Trigger: AGGTTGTGGTGACTGGTGCCATGATGTTTGACAGTA...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACAACCGGGACCTGCACTaGTACCCACAGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHNRDLH*YPQQPG
Trigger: ACCTGGCTGCTGTGGGTACCAGTGCAGGTCCCGGTT...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGTTTCTAAGCACAGGGTaGAAGGGGCAGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVFLSTG*KGQGPR
Trigger: CCTGGGCCCCTGCCCCTTCCACCCTGTGCTTAGAAA...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp ACTGGAGTCAAACATCAAGTCCTCCCGGAGCCGGAGAGCCCTGCAGTACTTTGGCCGGACGAGCACCAATaGCTCCGCTCCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TGVKHQVLPEPESPAVLWPDEHQ*LRSSLL
Trigger: CAGCAAGGAGGAGCGGAGCCATTGGTGCTCGTCCGG...CCAAAGTACTGCAGGGCTCTCCGGCTCCGGGAGGACTTGATGTTTGACTCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGACTTCCCTTTTCTCTGTaGAGCTCGTTACCATGGGAC +
Preference number: 4 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGLPFSL*SSLPWD
Trigger: GTCCCATGGTAACGAGCTCCACAGAGAAAAGGGAAG...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GTGCCCTCGAGGTGGTCAGTAACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACCTCCCCAGTTCTGGCTaGTCAGCCTGGGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: VPSRWSVTGGLKRTAASYLPSSG*SAWEYV
Trigger: GACATACTCCCAGGCTGACCAGCCAGAACTGGGGAG...GTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTTACTGACCACCTCGAGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GTGCCCTCGAGGTGGTCAGTAACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACCACCACCTCATGCAATaGCTTTCCCTGCGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: VPSRWSVTGGLKRTAASYHHLMQ*LSLRSP
Trigger: GGGAGACCGCAGGGAAAGCCATTGCATGAGGTGGTG...GTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTTACTGACCACCTCGAGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGTACAGTACAGGCAAGTaGGAATTGATGGCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGYSTGK*ELMAKE
Trigger: CTCCTTGGCCATCAATTCCCACTTGCCTGTACTGTA...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTTGAGGATCTTGTCTTGCACGGGGAGGTaGGTAGGTTGGGGGCATAAC +
Preference number: 4 (lower is better)
Translates to: AWLPDVALQNSELHLRILSCTGR*VGWGHN
Trigger: GTTATGCCCCCAACCTACCCACCTCCCCGTGCAAGA...CAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR CAA 72 bp ACGGTTCCGGCCGCCAGGGAAGATGCTGGGTACGTTTaGTCCTTTCCAGTCTGGTTCCTGCCTCCCAAACCC +
Preference number: 4 (lower is better)
Translates to: TVPAAREDAGYV*SFPVWFLPPKP
Trigger: GGGTTTGGGAGGCAGGAACCAGACTGGAAAGGACAAAACGTACCCAGCATCTTCCCTGGCGGCCGGAACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTCTCCACGTGCTGGCCTaGCACCTTCTCAGTGATCTT +
Preference number: 4 (lower is better)
Translates to: LLLALGHGCLVWEGLGGCLHVLA*HLLSDL
Trigger: AAGATCACTGAGAAGGTGTCAGGCCAGCACGTGGAG...ACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR TCA 90 bp AACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACTAAGAGCACACGGTGGGCCGAGTCCTCCACAGCATTaGCCACTTCCTCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: NGRAEENSGQLLRAHGGPSPPQH*PLPLAC
Trigger: GCATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACT...CGGCCCACCGTGTGCTCTTAGTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CTGCCTGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGAGTAGGCGGCCAGTGTaGAGTTCACGTCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LPGRSRVLSYRCSLSLLESRRPV*SSRRPW
Trigger: CCACGGGCGACGTGAACTTCACACTGGCCGCCTACT...CTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR TCA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACCTTCCAAGCAGAACGTaGGCAAACACAACCAAAATA +
Preference number: 4 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHLPSRT*ANTTKI
Trigger: TATTTTGGTTGTGTTTGCTCACGTTCTGCTTGGAAG...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGACTTCCAAGCAGAACGTaGGCAAACACAACCAAAATA +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRLPSRT*ANTTKI
Trigger: TATTTTGGTTGTGTTTGCTCACGTTCTGCTTGGAAG...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CAAGTCCACTCAAGAAGGCGGTTGCCGGAGTTTTCCTGCTCCACCCTGGGGAGGGCTGATAGCAGTGGCTaGGAGGGAGTCATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: QVHSRRRLPEFSCSTLGRADSSG*EGVIPD
Trigger: ATCTGGGATGACTCCCTCTCAGCCACTGCTATCAGC...CCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCAAGGAAATTAACATTTaGGTCAGTGAACTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRKEINI*VSELGD
Trigger: GTCTCCCAGTTCACTGACTCAAATGTTAATTTCCTT...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAAAAAGTCGAAATGTTaGAAAGCCCTGCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGKKSKC*KALQDG
Trigger: CCCATCCTGCAGGGCTTTTCAACATTTCGACTTTTT...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGTATTTGTTGAATGCCTaGATGTGCCCCCAAATCCAG +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSREYLLNA*MCPQIQ
Trigger: CTGGATTTGGGGGCACATTCAGGCATTCAACAAATA...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTGCTGTAGCTGCGCAAGGCTaGACAGAACTCGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PVTVASHHPLNSPFAAAAVAAQG*TELGGV
Trigger: GACACCCCCGAGTTCTGTGCAGCCTTGCGCAGCTAC...AGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACGCACCACGATGGTGGTaGCGATGTACTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHAPRWW*RCTWPG
Trigger: TCCAGGCCAAGTACATCGGCACCACCATCGTGGTGC...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCGCCTGGAAGTCGATCTaGTGGTTGAGGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRAWKSI*WLRGQP
Trigger: GGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGC...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGGCCTGGAAGTCGATCTaGTGGTTGAGGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQAWKSI*WLRGQP
Trigger: GGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGC...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTGCTCCGGCAGCTTCTCCTTaGACTTGGCCACGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PVTVASHHPLNSPFAAAAPAASP*TWPRLS
Trigger: AGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGG...AGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAGTCCTCTCATACAGGTaGAGTTTGTCTTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTVLSYR*SLSLLE
Trigger: CTCCAACAAAGACAAACTGCACCTGTATGAGAGGAC...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CTGCTGGTTGAGGGGGCAGCCCCGCAGGCAGAGGTAGAGACCCTGGCTGTCCCAGTCCTCTCATACAGGTaGAGTTTGTCTTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LLVEGAAPQAEVETLAVPVLSYR*SLSLLE
Trigger: CTCCAACAAAGACAAACTGCACCTGTATGAGAGGAC...TGGGACAGCCAGGGTCTCTACCTCTGCCTGCGGGGCTGCCCCCTCAACCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR GCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGCAGTCTGCTAAGGTaGCAAGCAGCGCCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRSSLLR*QAAPRG
Trigger: ACCCCGGGGCGCTGCTTGGCACCTTAGCAGACTGCT...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGAGCAGTCTGCTAAGGTaGCAAGCAGCGCCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQSSLLR*QAAPRG
Trigger: ACCCCGGGGCGCTGCTTGGCACCTTAGCAGACTGCT...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAATAAATAAATGCAATTaGAGAGAGGAGGCGGCCACT +
Preference number: 4 (lower is better)
Translates to: RQEICTPWAVPAHTWGSRINKCN*REEAAT
Trigger: AGTGGCCGCCTCCTCTCTGCAATTGCATTTATTTAT...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGCTGCAGTACTTTGGCTaGTCTGTGGCCTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVLQYFG*SVASPG
Trigger: CCCAGGTGAGGCCACAGAGCAGCCAAAGTACTGCAG...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCACCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTGGCTGGAGGCTGGAGTaGAGTGGTGCGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PPTDRPQCVMFPSLCPCVGWRLE*SGAISA
Trigger: AGCAGAGATCGCACCACTGCACTCCAGCCTCCAGCC...AACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCTCTTGCACGGGGAGGTaGCTGCGGGGAAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRSCTGR*LRGSCR
Trigger: TCTGCAGCTTCCCCGCAGCCACCTCCCCGTGCAAGA...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
CDS-3UTR CCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACGAAAGTCCTGAGGTGTaGGTCCCCGAAGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHESPEV*VPEEAT
Trigger: TGTGGCCTCTTCGGGGACCCACACCTCAGGACTTTC...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGTTGGTGTGGAAGGCCTaGAAGTCGATCTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGLVWKA*KSICWL
Trigger: CAACCAGCAGATCGACTTCCAGGCCTTCCACACCAA...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACCGGTGCCCTCAGCATTaGTGTGGAAGGCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHRCPQH*CGRPGS
Trigger: ACTTCCAGGCCTTCCACACCAATGCTGAGGGCACCG...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGTTGTCTTTGTTGGAGTaGAGCATCTTGACATCCTCC +
Preference number: 4 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRLSLLE*SILTSS
Trigger: GGAGGATGTCAAGATGCTCCACTCCAACAAAGACAA...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGGCCCACACACGGTTCTaGCAGAGGGAGCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQAHTRF*QREQDL
Trigger: GAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGC...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAAAAAGCAATGTGTGGTaGCTGTTAAACTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGKSNVW*LLNCCI
Trigger: GATGCAGCAGTTTAACAGCCACCACACATTGCTTTT...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATTTCTTCTGTGTGCCCTaGCTTCTCAGGAACTGTTCT +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHFFCVP*LLRNCS
Trigger: AGAACAGTTCCTGAGAAGCCAGGGCACACAGAAGAA...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATCGAGTGTTAGCTCACTaGATTTCCATACTGACCTCG +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHRVLAH*ISILTS
Trigger: CGAGGTCAGTATGGAAATCCAGTGAGCTAACACTCG...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCACTCATCCCTTTTTATaGCTGCATAGTACTCCATGG +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEATHPFL*LHSTPW
Trigger: CCATGGAGTACTATGCAGCCATAAAAAGGGATGAGT...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGCGTCATCATCTACATTaGGTATTTCTCCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGRHHLH*VFLLML
Trigger: GAGCATCAGGAGAAATACCCAATGTAGATGATGACG...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CAAGTCCACTCAAGAAGGCGGTTGCCGGAGTTTTCCTGCTCCACCCTGGGGAGGCTTGACGGGGTGCTTTaGGGACTGCTGCTTCCCATA +
Preference number: 4 (lower is better)
Translates to: QVHSRRRLPEFSCSTLGRLDGVL*GLLLPI
Trigger: TATGGGAAGCAGCAGTCCCCAAAGCACCCCGTCAAG...CCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGTCCTCCACAGCATTaGCCACTTCCTCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVSPPQH*PLPLAC
Trigger: GCATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACT...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCTTCTGGGCCCCTGGATaGGCACCCTGGGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRFWAPG*APWAEM
Trigger: CATTTCAGCCCAGGGTGCTCATCCAGGGGCCCAGAA...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGCTCCTGGCCAGTGTATaGGAGGTCCCTGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQLLASV*EVPGEQ
Trigger: CTGTTCCCCAGGGACCTCTCATACACTGGCCAGGAG...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCTGTACAGATGAAATGTaGTCACAGCTGCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: HARRSAPRGRSQPTHGEACTDEM*SQLPIN
Trigger: GTTTATTGGCAGCTGTGATCACATTTCATCTGTACA...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GATCACAGCCCTCATTCCGGAACGCCACTGACATTACGAGCGTGCCTTGCACACACATTCTGCTTTGGCTaGACGGCCTGGAGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: DHSPHSGTPLTLRACLAHTFCFG*TAWRGL
Trigger: GAGCCCTCTCCAGGCCGTTCAGCCAAAGCAGAATGT...GTGTGCAAGGCACGCTCGTAATGTCAGTGGCGTTCCGGAATGAGGGCTGTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CCAGACTACGACCAGCCACATCGGGGGTGGCCTACAAATGTTTGTGCCAGGAAGCTCATCAAACCGCTCTaGTGGAGCCTGCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PDYDQPHRGWPTNVCARKLIKPL*WSLPAL
Trigger: AAGGGCAGGCAGGCTCCATCAGAGCGGTTTGATGAG...CTTCCTGGCACAAACATTTGTAGGCCACCCCCGATGTGGCTGGTCGTAGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp ACTGGAGTCAAACATCAAGTCCTCCCGGAGCCGGAGAGCCCTGCAGTACTTTGGTGCACAGGGCGTAGCTaGGCAAGGCTGCACAGAACT +
Preference number: 4 (lower is better)
Translates to: TGVKHQVLPEPESPAVLWCTGRS*ARLHRT
Trigger: AGTTCTGTGCAGCCTTGCGCAGCTACGCCCTGTGCA...CCAAAGTACTGCAGGGCTCTCCGGCTCCGGGAGGACTTGATGTTTGACTCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp AGCTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTTCCTTGGAGCAGTTGTaGTGGCTCATGAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFSLHLATAVSYGKVSGASLEQL*WLMRSS
Trigger: AGAGGACCTCATGAGCCAGCACAACTGCTCCAAGGA...AGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR GCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCCCGGCAGCTTCTCCTTaGACTTGGCCACGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRPAASP*TWPRLS
Trigger: AGACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGG...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGTCCTCTCATACAGGTaGAGTTTGTCTTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHVLSYR*SLSLLE
Trigger: CTCCAACAAAGACAAACTGCACCTGTATGAGAGGAC...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR GCA 90 bp CCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTGCTGGGAGACACACGTTCTaGAGCCTCCTGGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: PVTVASHHPLNSPFAAAAGRHTF*SLLASV
Trigger: TACACTGGCCAGGAGGCTGCAGAACGTGTGTCTCCC...AGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CTCCCCTTGCTAGCCTGCAGGTTCACCTCTCCCAAGAGTCCAGGGTCTGTATCGCACACACACACTTGCTaGAGGGGATCCCACCACCAA +
Preference number: 4 (lower is better)
Translates to: LPLLACRFTSPKSPGSVSHTHTC*RGSHHQ
Trigger: TTGGTGGTGGGATCCCCTGCAGCAAGTGTGTGTGTG...CGATACAGACCCTGGACTCTTGGGAGAGGTGAACCTGCAGGCTAGCAAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GGGAGTCATCCCAGATCTCAGGCTATCCCACCCATCTCATCCCAGAGGGCACCAAGGAACTGTTCTCTGTaGCGGACGAGCACCAATGGC +
Preference number: 4 (lower is better)
Translates to: GSHPRSQAIPPISSQRAPRNCSL*RTSTNG
Trigger: GCCATTGGTGCTCGTCCGGCACAGAGAACAGTTCCT...TGGTGCCCTCTGGGATGAGATGGGTGGGATAGCCTGAGATCTGGGATGACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATTACGAGTGAGAACATaGGGTGTTTGGTTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRLRVRT*GVWFSV
Trigger: AACAGAAAACCAAACACCGCATGTTCTCACTCGTAA...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGCCTTGGGATCTGGGCTaGCTGGGATCACAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQPWDLG*LGSQPS
Trigger: TGAGGGCTGTGATCCCAGGCAGCCCAGATCCCAAGG...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATCCCATATTGCCAACTaGCTTATGTCCTTTACAGTC +
Preference number: 4 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTSHIAN*LMSFTV
Trigger: GACTGTAAAGGACATAAGGCAGTTGGCAATATGGGA...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATTGCTGCTTCCCATATTaGCAACTGCCTTATGTCCTT +
Preference number: 4 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHCCFPY*QLPYVL
Trigger: AAGGACATAAGGCAGTTGGCAATATGGGAAGCAGCA...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp ACTGGAGTCAAACATCAAGTCCTCCCGGAGCCGGAGAGCCCTGCAGTACTTTGGGCCCCCTCCCCACACTaGACGTGTAACTCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: TGVKHQVLPEPESPAVLWAPSPH*TCNSCC
Trigger: ACAACACGAGTTACACGTGCAGTGTGGGGAGGGGGC...CCAAAGTACTGCAGGGCTCTCCGGCTCCGGGAGGACTTGATGTTTGACTCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGTCTCCCAAGGGGCTTTaGGCCAGTATGAGCTTATGT +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGSPKGL*ASMSLC
Trigger: ACATAAGCTCATACTGGCGCAAAGCCCCTTGGGAGA...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACGTCGCCAGGTGGGGCCATCCTTaGAGCAGTTGTGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: HLDILQRVVGGQCEVHVARWGHP*SSCAGS
Trigger: TGAGCCAGCACAACTGCTCCAAGGATGGCCCCACCT...GGCGACGTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp GTGTCTGAACACGTCTTTGTTCTTCTCTGGGCAGATCTGCTTGGCCAGACACATGCTTGCTGGTGGCAGTaGCCGCTGAGCCGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VSEHVFVLLWADLLGQTHACWWQ*PLSRAA
Trigger: TGCTGCCCGGCTCAGCGGCCACTGCCACCAGCAAGC...ATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGCCTGGAAGTCGATTGTCTTTGTTGGAGTaGAGCATCTTGACATCCTCC +
Preference number: 4 (lower is better)
Translates to: PACGHRCPQHWCGRPGSRLSLLE*SILTSS
Trigger: GGAGGATGTCAAGATGCTCCACTCCAACAAAGACAA...TCGACTTCCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp AGGGGTGGCGTGGCATGCAGGAGCTGCCCCATGGACATTGCCTTAATGAACGAACGTTCTGCAGCCTCCTaGCCAGTGTATGAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: RGGVACRSCPMDIALMNERSAAS*PVYERS
Trigger: GGACCTCTCATACACTGGCCAGGAGGCTGCAGAACG...TTCGTTCATTAAGGCAATGTCCATGGGGCAGCTCCTGCATGCCACGCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCAGACTACGACCAGCCACATCGGGGGTGGCCTACAAATGTTTGTGCCAGGAAGCTCACCTGGGACCCCTaGTCTGTCCACTTGCTACTG +
Preference number: 4 (lower is better)
Translates to: PDYDQPHRGWPTNVCARKLTWDP*SVHLLL
Trigger: CAGTAGCAAGTGGACAGACCAGGGGTCCCAGGTGAG...CTTCCTGGCACAAACATTTGTAGGCCACCCCCGATGTGGCTGGTCGTAGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGAGTGCCAACTTGATTaGATTGGAGGATGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRECQLD*IGGCKV
Trigger: TACTTTGCATCCTCCAATCCAATCAAGTTGGCACTC...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGGGGTGGCGTGGCATGCAGGAGCTGCCCCATGGACATTGCCTTAATGAACGAAGAGGCTGGAGTGCAGTaGTGCGATCTCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RGGVACRSCPMDIALMNEEAGVQ*CDLCLL
Trigger: CAGCAAGCAGAGATCGCACCACTGCACTCCAGCCTC...TTCGTTCATTAAGGCAATGTCCATGGGGCAGCTCCTGCATGCCACGCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACTAAGAGCACACGGTGGGCCGCGATTCAGAAGGTGGTaGTTTCCCAGGGGACAATGG +
Preference number: 4 (lower is better)
Translates to: NGRAEENSGQLLRAHGGPRFRRW*FPRGQW
Trigger: CCATTGTCCCCTGGGAAACCACCACCTTCTGAATCG...CGGCCCACCGTGTGCTCTTAGTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCAGACTACGACCAGCCACATCGGGGGTGGCCTACAAATGTTTGTGCCAGGAAGGTGGGGCTGGTCCAGTaGACAGAGCTCTTGCATCGT +
Preference number: 4 (lower is better)
Translates to: PDYDQPHRGWPTNVCARKVGLVQ*TELLHR
Trigger: ACGATGCAAGAGCTCTGTCCACTGGACCAGCCCCAC...CTTCCTGGCACAAACATTTGTAGGCCACCCCCGATGTGGCTGGTCGTAGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GTGGAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACGGGAGGTGGGTAGGTTaGGGGCATAACAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: VEHLDILQRVVGGQCEVHGRWVG*GHNSCP
Trigger: AGGGCAGCTGTTATGCCCCCAACCTACCCACCTCCC...GTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554387.5
3UTR CAA 72 bp CTCTGGGCAGATCTGCTTGGCCAGACACATTCTGCTTaGGCTGAACGGCCTGGAGAGGGCTCCAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: LWADLLGQTHSA*AERPGEGSNSC
Trigger: GCAGGAATTGGAGCCCTCTCCAGGCCGTTCAGCCAAAGCAGAATGTGTCTGGCCAAGCAGATCTGCCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp AGAGAAAGGGAAGGTCAAGTCCACTCAAGAAGGCGGTaGCCGGAGTTTTCCTGCTCCACCCTGGGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: REREGQVHSRRR*PEFSCSTLGRD
Trigger: GTCCCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTGACCTTCCCTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp GGGGTCCCCTCTGAATACAGTACAGGCAAGTGGGAATaGATGGCCAAGGAGCAGGGTGGGCTCAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: GVPSEYSTGKWE*MAKEQGGLSGW
Trigger: CCATCCACTGAGCCCACCCTGCTCCTTGGCCATCAATTCCCACTTGCCTGTACTGTATTCAGAGGGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp TGCTGGCCTGACACCTTCTCAGTGATCTTCAGGCTGTaGGCCCCGTGCTTGTCCCCACCGTTCTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: CWPDTFSVIFRL*APCLSPPFLEP
Trigger: TGGCTCTAAGAACGGTGGGGACAAGCACGGGGCCAACAGCCTGAAGATCACTGAGAAGGTGTCAGGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR TCA 90 bp GCAGAGGTAGAGACCCTGGCTGTCCCAGTCCTCCACAGCATTGACCACTTCCTCGAAGAGATTAGAGGTTaGAGACCCTGCCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: AEVETLAVPVLHSIDHFLEEIRG*RPCQGC
Trigger: GCATCCCTGGCAGGGTCTTCAACCTCTAATCTCTTC...GAGGAAGTGGTCAATGCTGTGGAGGACTGGGACAGCCAGGGTCTCTACCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR TCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACCTCAGAGAGGTGAAGTaGCTTGCCCATGGTCACACT +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHLREVK*LAHGHT
Trigger: AGTGTGACCATGGGCAAGTCACTTCACCTCTCTGAG...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGAGTGGGAGGATTGCTTaGGCCCAGGAAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQSGRIA*AQEVEA
Trigger: AGCCTCCACTTCCTGGGCTCAAGCAATCCTCCCACT...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp ACTGGAGTCAAACATCAAGTCCTCCCGGAGCCGGAGAGCCCTGCAGTACTTTGGATTCCGGAACGCCACTaGCATTACGAGCGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TGVKHQVLPEPESPAVLWIPERH*HYERAL
Trigger: CAAGGCACGCTCGTAATGTCAGTGGCGTTCCGGAAT...CCAAAGTACTGCAGGGCTCTCCGGCTCCGGGAGGACTTGATGTTTGACTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACCTTCTCTGTAACAGCTaGCGCTGGCCTTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHLLCNS*RWPCCT
Trigger: TGTGCAACAAGGCCAGCGTCAGCTGTTACAGAGAAG...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACTCCTTGGAGCAGTTGTaGTGGCTCATGAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHSLEQL*WLMRSS
Trigger: AGAGGACCTCATGAGCCAGCACAACTGCTCCAAGGA...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGGCCTGGATCTCCACGTaGTGGCCTGACACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQAWIST*WPDTFS
Trigger: TGAGAAGGTGTCAGGCCAGCACGTGGAGATCCAGGC...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp GTGGAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACGCACCACGATGGTGGTaGCGATGTACTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VEHLDILQRVVGGQCEVHAPRWW*RCTWPG
Trigger: TCCAGGCCAAGTACATCGGCACCACCATCGTGGTGC...GTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTCCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR GCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCCCACTTCCTCTGGCATaGGGACGGCAAAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRPLPLA*GRQRSG
Trigger: ACCTGACCTTTGCCGTCCGCATGCCAGAGGAAGTGG...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp ACCCTCTGCTCACCCCAGAACCAGAGCCCTGGTTTGACTCCGCCCCTGCTGTGGGTCCTCTCATACAGGTaGAGTTTGTCTTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TLCSPQNQSPGLTPPLLWVLSYR*SLSLLE
Trigger: CTCCAACAAAGACAAACTGCACCTGTATGAGAGGAC...CCACAGCAGGGGCGGAGTCAAACCAGGGCTCTGGTTCTGGGGTGAGCAGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCACCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTCACAACCTTGTCACGTaGACTAGAAGGGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PPTDRPQCVMFPSLCPCVHNLVT*TRRGGV
Trigger: GACCCCTCCCCTTCTAGTGCACGTGACAAGGTTGTG...AACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCACCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTAGACCCTGCCAGGGATaGTCAGAGCTGAGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: PPTDRPQCVMFPSLCPCVRPCQG*SELRVL
Trigger: TAGGACTCTCAGCTCTGAGCATCCCTGGCAGGGTCT...AACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCGGGAGACACACGTTCTaGAGCCTCCTGGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRGRHTF*SLLASV
Trigger: TACACTGGCCAGGAGGCTGCAGAACGTGTGTCTCCC...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGTGGTGGCTGTTAAACTaGTGCATCTTCTATCCGCCT +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGWWLLN*CIFYPP
Trigger: AGGCGGATAGAAGATGCAGCAGTTTAACAGCCACCA...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGTCAGCCTTCCTGGTCTaGCTGGGATTAATGAACTTG +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGSAFLV*LGLMNL
Trigger: CAAGTTCATTAATCCCAGGCAGACCAGGAAGGCTGA...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGCCTGACTTAGTGATCTaGCCGCTTTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVPDLVI*PLWPPK
Trigger: TTTGGGAGGCCAAAGCGGGCAGATCACTAAGTCAGG...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGTGCACACTGGCTGCCTaGAGCTGTCTATTAATTCAG +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGCTLAA*SCLLIQ
Trigger: CTGAATTAATAGACAGCTGCAGGCAGCCAGTGTGCA...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCATTACGAGCGTGCCTTaGACACTGGCTGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRITSVP*TLAACS
Trigger: GCTGCAGGCAGCCAGTGTGCAAGGCACGCTCGTAAT...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTGCTCTGACATTACGAGCGTaGCTTGCACACTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PVTVASHHPLNSPFAAAALTLRA*LAHWLP
Trigger: AGGCAGCCAGTGTGCAAGGCACGCTCGTAATGTCAG...AGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GGGAGTCATCCCAGATCTCAGGCTATCCCACCCATCTCATCCCAGAGGGCACCAAGTGGACAGAGCTCTTaGATCGTTTCCTTGACGGGG +
Preference number: 4 (lower is better)
Translates to: GSHPRSQAIPPISSQRAPSGQSS*IVSLTG
Trigger: CCCCGTCAAGGAAACGATGCAAGAGCTCTGTCCACT...TGGTGCCCTCTGGGATGAGATGGGTGGGATAGCCTGAGATCTGGGATGACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGCCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQPMYLA*ISTCWP
Trigger: AGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGG...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TTTGTTGGAGTGGAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTCACGGCTGTCTCGTATaGGAAGGTCTCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FVGVEHLDILQRVVGGQCHGCLV*EGLGGC
Trigger: ACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTG...ACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTCCACTCCAACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp TGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGAACCGGGACCTGCACTaGTACCCACAGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WQVPSPLIQVQFVFVGVENRDLH*YPQQPG
Trigger: ACCTGGCTGCTGTGGGTACCAGTGCAGGTCCCGGTT...CTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCTTTACCCTCAAACATTaGACTCCAAGTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSFTLKH*TPSSSA
Trigger: AGCTGAAGAACTTGGAGTCCAATGTTTGAGGGTAAA...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CAAGTCCACTCAAGAAGGCGGTTGCCGGAGTTTTCCTGCTCCACCCTGGGGAGGGCAGGATGGGGAAGGTaGCTAAGGAAAGCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: QVHSRRRLPEFSCSTLGRAGWGR*LRKAVD
Trigger: ATCAACAGCTTTCCTTAGCCACCTTCCCCATCCTGC...CCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTCTCAACCAACACCCACCCTaGGGCACTTGCCTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: PTDRPQCVMFPSLCPCVLNQHPP*GTCLKG
Trigger: TCCCTTAAGGCAAGTGCCCCAGGGTGGGTGTTGGTT...GAGAACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp GACAGGGTGATGCTGGGCGACATGAATGTTTTCGCCTaGGGATCTGGGCTGCCTGGGATCACAGCCCTCATT +
Preference number: 4 (lower is better)
Translates to: DRVMLGDMNVFA*GSGLPGITALI
Trigger: AATGAGGGCTGTGATCCCAGGCAGCCCAGATCCCAAGGCGAAAACATTCATGTCGCCCAGCATCACCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp GGCTGGTCCAGTGGACAGAGCTCTTGCATCGTTTCCTaGACGGGGTGCTTTGGGGACTGCTGCTTCCCATAT +
Preference number: 4 (lower is better)
Translates to: GWSSGQSSCIVS*TGCFGDCCFPY
Trigger: ATATGGGAAGCAGCAGTCCCCAAAGCACCCCGTCAAGGAAACGATGCAAGAGCTCTGTCCACTGGACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GTGGAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACCTGACACCTTCTCAGTaGTCTTCAGGCTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: VEHLDILQRVVGGQCEVHLTPSQ*SSGCWP
Trigger: GGGCCAACAGCCTGAAGATCACTGAGAAGGTGTCAG...GTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR TCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACGCATTTCCATGCTCGTaGGGGCAACCAGTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHAFPCS*GQPVVS
Trigger: ACTTACTACTGGTTGCCCTCACGAGCATGGAAATGC...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TTTGTTGGAGTGGAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGGGAGACACACGTTCTaGAGCCTCCTGGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: FVGVEHLDILQRVVGGQCGRHTF*SLLASV
Trigger: TACACTGGCCAGGAGGCTGCAGAACGTGTGTCTCCC...ACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTCCACTCCAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR GCA 90 bp GATCACAGCCCTCATTCCGGAACGCCACTGACATTACGAGCGTGCCTTGCACACAGAGGTGAAGTGACTTaGCCATGGTCACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: DHSPHSGTPLTLRACLAHRGEVT*PWSHCW
Trigger: CCAGCAGTGTGACCATGGGCAAGTCACTTCACCTCT...GTGTGCAAGGCACGCTCGTAATGTCAGTGGCGTTCCGGAATGAGGGCTGTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACTTCCAGAGAACAGCATaGAGGCTCAGAGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHFQRTA*RLREVK
Trigger: CTTCACCTCTCTGAGCCTGCATGCTGTTCTCTGGAA...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CTCCCCTTGCTAGCCTGCAGGTTCACCTCTCCCAAGAGTCCAGGGTCTGTATCGCAACCTAGCCCGTCCTaGAAGATGAAGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LPLLACRFTSPKSPGSVSQPSPS*KMKLLL
Trigger: AAGAAGCAGCTTCATCTTGCAGGACGGGCTAGGTTG...CGATACAGACCCTGGACTCTTGGGAGAGGTGAACCTGCAGGCTAGCAAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTGCTGCTCTGACGGGTCTCTaGCCAAGTGTTCTGGTAATG +
Preference number: 4 (lower is better)
Translates to: PVTVASHHPLNSPFAAAAALTGL*PSVLVM
Trigger: CATTACCAGAACACTTGGGCAGAGACCCGTCAGAGC...AGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACAGTAACTGTGGTTTATTaGCTTGTCTTTCCAATAAGA +
Preference number: 4 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTVTVVY*LVFPIR
Trigger: TCTTATTGGAAAGACAAGGCAATAAACCACAGTTAC...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGTGCACCTTGCAGGTCTaGAAGCGGTCGGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQCTLQV*KRSVKV
Trigger: GACTTTCACCGACCGCTTCCAGACCTGCAAGGTGCA...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GCCTGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGTGCACCTTGCAGGTCTaGAAGCGGTCGGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: AWQVPSPLIQVQFVFVGVCTLQV*KRSVKV
Trigger: GACTTTCACCGACCGCTTCCAGACCTGCAAGGTGCA...CACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CCA 90 bp GAGCATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACGTCGCCTGGTACACCTTCTaGTCCACACACTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: EHLDILQRVVGGQCEVHVAWYTF*STHSWK
Trigger: CTTCCAGGAGTGTGTGGACCAGAAGGTGTACCAGGC...GACGTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATGCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp TGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGCCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: WQVPSPLIQVQFVFVGVEPMYLA*ISTCWP
Trigger: AGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGG...CTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp TGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGCGGTGCCCTCAGCATTaGTGTGGAAGGCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: WQVPSPLIQVQFVFVGVERCPQH*CGRPGS
Trigger: ACTTCCAGGCCTTCCACACCAATGCTGAGGGCACCG...CTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGTTGTCTTTGTTGGAGTaGAGCATCTTGACATCCTCC +
Preference number: 4 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGLSLLE*SILTSS
Trigger: GGAGGATGTCAAGATGCTCCACTCCAACAAAGACAA...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCTCTCTCCTGGCTGTGTaGCCACAGGGCTTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRSLLAV*PQGLRE
Trigger: TTCCCTTAAGCCCTGTGGCCACACAGCCAGGAGAGA...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGACCAAGAATACTTTGTaGCTAGTGCCATTTAGCATT +
Preference number: 4 (lower is better)
Translates to: QEICTPWAVPAHTWGSRETKNTL*LVPFSI
Trigger: AATGCTAAATGGCACTAGCCACAAAGTATTCTTGGT...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp ACCCTCTGCTCACCCCAGAACCAGAGCCCTGGTTTGACTCCGCCCCTGCTGTGGTTATACTTTCAGTTATaGGGTACACGTGCAGAACGC +
Preference number: 4 (lower is better)
Translates to: TLCSPQNQSPGLTPPLLWLYFQL*GTRAER
Trigger: GCGTTCTGCACGTGTACCCCATAACTGAAAGTATAA...CCACAGCAGGGGCGGAGTCAAACCAGGGCTCTGGTTCTGGGGTGAGCAGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCGTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGCTCTGTCGCCCAGGCTaGAGGCTGGAGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PSCKMKLLLGNLLAQDAVLCRPG*RLECSG
Trigger: ACCACTGCACTCCAGCCTCCAGCCTGGGCGACAGAG...CACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTCTCAGACACATTCTGCTTTaGCTGAACGGCCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PTDRPQCVMFPSLCPCVLRHILL*LNGLER
Trigger: CCTCTCCAGGCCGTTCAGCCAAAGCAGAATGTGTCT...GAGAACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGTGGGCAGTGGGTGACTaGCAGGAAATGGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQWAVGD*QEMVSL
Trigger: CAAGCTGACCATTTCCTGCCAGTCACCCACTGCCCA...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGTGGAGTGGAGCATCTTaGCATCCTCCAACGCGTAGT +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQWSGAS*HPPTRS
Trigger: ACTACGCGTTGGAGGATGTCAAGATGCTCCACTCCA...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp GCCTGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGTGGAGTGGAGCATCTTaGCATCCTCCAACGCGTAGT +
Preference number: 4 (lower is better)
Translates to: AWQVPSPLIQVQFVFVGVWSGAS*HPPTRS
Trigger: ACTACGCGTTGGAGGATGTCAAGATGCTCCACTCCA...CACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR TCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCGAAGAGATTAGAGGTTaGAGACCCTGCCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGREEIRG*RPCQGC
Trigger: GCATCCCTGGCAGGGTCTTCAACCTCTAATCTCTTC...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCTACTGGTCAACATGGTaGAACACCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: TCTGTHSSQVNMGREATGYWSTW*NTISTK
Trigger: TTTAGTAGAGATGGTGTTTCACCATGTTGACCAGTA...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CCGTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGCTCACGAGCATGCCTTaGACACAGGCTGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PSCKMKLLLGNLLAQDAVLTSMP*TQAACA
Trigger: GGCACAGGCAGCCTGTGTTCAAGGCATGCTCGTGAG...CACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGAGGGCCGTCCGCCGCGTaGACAGGGCGTAGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRGPSAA*TGRSCA
Trigger: TGCGCAGCTACGCCCTGTGCACGCGGCGGACGGCCC...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGTCCTTGGAGCAGTTGTaGTGGCTCATGAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQSLEQL*WLMRSS
Trigger: AGAGGACCTCATGAGCCAGCACAACTGCTCCAAGGA...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGATGCAGGGCTGGCGGCTaGCAGCCTGCGGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRCRAGG*QPAGTG
Trigger: ACCGGTGCCCGCAGGCTGGCAGCCGCCAGCCCTGCA...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTGCTTTTCTCTGCACAGAATaGTCTGTCCGGCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: PVTVASHHPLNSPFAAAAFLCTE*SVRLCM
Trigger: CATGCAGAGCCGGACAGAGCATTCTGTGCAGAGAAA...AGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GTGCCCTCGAGGTGGTCAGTAACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACACCATACCTGAGATTTaGACACAGGAAAGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: VPSRWSVTGGLKRTAASYTIPEI*TQESAV
Trigger: GACTGCACTTTCCTGTGTGCAAATCTCAGGTATGGT...GTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTTACTGACCACCTCGAGGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GGGAGTCATCCCAGATCTCAGGCTATCCCACCCATCTCATCCCAGAGGGCACCACAGGGGTCTTCCCATTaGAGCAAGCTTCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: GSHPRSQAIPPISSQRAPQGSSH*SKLLSI
Trigger: AATGGAAAGAAGCTTGCTGCAATGGGAAGACCCCTG...TGGTGCCCTCTGGGATGAGATGGGTGGGATAGCCTGAGATCTGGGATGACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGCTTGGTGTGGAAGGCCTaGAAGTCGATCTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GRSRVLSYRCSLSLLEWSLVWKA*KSICWL
Trigger: CAACCAGCAGATCGACTTCCAGGCCTTCCACACCAA...GCTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CCA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTAAGTTCTTCAGCTTTTaGACTCTTGGACTTACACTG +
Preference number: 4 (lower is better)
Translates to: RAAVGRAFQCIARGKELTKFFSF*TLGLTL
Trigger: CAGTGTAAGTCCAAGAGTCCAAAAGCTGAAGAACTT...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCACCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTTTTGAGTCAGTGAACTaGGAGACAGAGACCCACGCT +
Preference number: 4 (lower is better)
Translates to: PPTDRPQCVMFPSLCPCVFESVN*ETETHA
Trigger: AGCGTGGGTCTCTGTCTCCCAGTTCACTGACTCAAA...AACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCGTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGCCCTCTCCCCAGTTCTaGCTGGTCAGCCTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: PSCKMKLLLGNLLAQDAVPSPQF*LVSLGV
Trigger: TACTCCCAGGCTGACCAGCCAGAACTGGGGAGAGGG...CACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGGTGACTGGCAGGAAATaGTCAGCTTGGAGGAACGGT +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQVTGRK*SAWRNG
Trigger: ACCGTTCCTCCAAGCTGACCATTTCCTGCCAGTCAC...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp CTTGACGGGGTGCTTTGGGGACTGCTGCTTCCCATATaGCCAACTGCCTTATGTCCTTTACAGTCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: LDGVLWGLLLPI*PTALCPLQSCG
Trigger: ACCGCAGGACTGTAAAGGACATAAGGCAGTTGGCAATATGGGAAGCAGCAGTCCCCAAAGCACCCCGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CCATGGGACCCTGGGTTTTGTAACTGTGGTTTATTGCCTTGTCTTTCCAATAAGTCACGTCGCCCGTGGTaGGGAGGTCGAAGACGCAGG +
Preference number: 4 (lower is better)
Translates to: PWDPGFCNCGLLPCLSNKSRRPW*GGRRRR
Trigger: CCTGCGTCTTCGACCTCCTCACCACGGGCGACGTGA...CTTATTGGAAAGACAAGGCAATAAACCACAGTTACAAAACCCAGGGTCCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp AGCTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTCTTCCAAGCAGAACGTaGGCAAACACAACCAAAATA +
Preference number: 4 (lower is better)
Translates to: SFSLHLATAVSYGKVSGALPSRT*ANTTKI
Trigger: TATTTTGGTTGTGTTTGCTCACGTTCTGCTTGGAAG...AGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR TCA 90 bp GTGCCCTCGAGGTGGTCAGTAACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACCCTTCTCCCCTTAACTaGTTTATCTTGCTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: VPSRWSVTGGLKRTAASYPSPLN*FILLWD
Trigger: ATCCCAAAGCAAGATAAATCAGTTAAGGGGAGAAGG...GTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTTACTGACCACCTCGAGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CCGTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGCTTCCCGCTGCCCAGTaGTTAAGGCCTAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PSCKMKLLLGNLLAQDAVLPAAQ*LRPSPA
Trigger: TGCAGGACTAGGCCTTAATCACTGGGCAGCGGGAAG...CACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCGTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGCTCCCCTTGCTAGCCTaGAGGTTCACCTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: PSCKMKLLLGNLLAQDAVLPLLA*RFTSPK
Trigger: CTTGGGAGAGGTGAACCTGCAGGCTAGCAAGGGGAG...CACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACTTGTCTTTGTTGGAGTaGAGCATCTTGACATCCTCC +
Preference number: 4 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHLSLLE*SILTSS
Trigger: GGAGGATGTCAAGATGCTCCACTCCAACAAAGACAA...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTCTCGCTTGTAACCTGGAGTaGGTCAGTTGGCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: PTDRPQCVMFPSLCPCVLACNLE*VSWLLF
Trigger: AAAGAGAAGCCAACTGACCCACTCCAGGTTACAAGC...GAGAACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp AGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTaGTTGGAGTGGAGCATCTTGACATCCTCCAACGCG +
Preference number: 4 (lower is better)
Translates to: RSRVLSYRCSLS*LEWSILTSSNA
Trigger: CGCGTTGGAGGATGTCAAGATGCTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR TCA 90 bp TCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGCATCTTGCTCCACGTGCTGGCCTaGCACCTTCTCAGTGATCTT +
Preference number: 4 (lower is better)
Translates to: SRVLSYRCSLSLLEWSILLHVLA*HLLSDL
Trigger: AAGATCACTGAGAAGGTGTCAGGCCAGCACGTGGAG...CAAGATGCTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR TCA 90 bp CCGTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGAGTATGTACACGCGGTaGCACTCCACACAGGTCGCA +
Preference number: 4 (lower is better)
Translates to: PSCKMKLLLGNLLAQDAVSMYTR*HSTQVA
Trigger: TGCGACCTGTGTGGAGTGTCACCGCGTGTACATACT...CACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp TCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGCATCTTGAGTATGTACACGCGGTaGCACTCCACACAGGTCGCA +
Preference number: 4 (lower is better)
Translates to: SRVLSYRCSLSLLEWSILSMYTR*HSTQVA
Trigger: TGCGACCTGTGTGGAGTGTCACCGCGTGTACATACT...CAAGATGCTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR TCA 90 bp AGGGGTGGCGTGGCATGCAGGAGCTGCCCCATGGACATTGCCTTAATGAACGAATCATGGCATTTAGTTTaGAGAGAAGGGGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RGGVACRSCPMDIALMNESWHLV*REGASG
Trigger: TCCTGAAGCCCCTTCTCTTCAAACTAAATGCCATGA...TTCGTTCATTAAGGCAATGTCCATGGGGCAGCTCCTGCATGCCACGCCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GTGTCTGAACACGTCTTTGTTCTTCTCTGGGCAGATCTGCTTGGCCAGACACATACAATTAGCCGGGTGTaGCGGCAGGCACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: VSEHVFVLLWADLLGQTHTISRV*RQAPVI
Trigger: GATTACAGGTGCCTGCCGTCACACCCGGCTAATTGT...ATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GGGAGTCATCCCAGATCTCAGGCTATCCCACCCATCTCATCCCAGAGGGCACCAACTGTGCTGCTATTCTaGCTCATGGCATTTAGTTTG +
Preference number: 4 (lower is better)
Translates to: GSHPRSQAIPPISSQRAPTVLLF*LMAFSL
Trigger: CAAACTAAATGCCATGAGGCAGAATAGCAGCACAGT...TGGTGCCCTCTGGGATGAGATGGGTGGGATAGCCTGAGATCTGGGATGACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCCCCTTCTCACCCTCCTaGAATCCAAAATGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRPFSPS*NPKCVS
Trigger: AGACACACATTTTGGATTGCAGGAGGGTGAGAAGGG...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GGGAGTCATCCCAGATCTCAGGCTATCCCACCCATCTCATCCCAGAGGGCACCAGACGTATTTGTTGAATaGCTGAATGTGCCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: GSHPRSQAIPPISSQRAPDVFVE*LNVPPN
Trigger: ATTTGGGGGCACATTCAGGCATTCAACAAATACGTC...TGGTGCCCTCTGGGATGAGATGGGTGGGATAGCCTGAGATCTGGGATGACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCATGGGACCCTGGGTTTTGTAACTGTGGTTTATTGCCTTGTCTTTCCAATAAGGACTCCAGACGTGGATaGACCGGGCTGGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PWDPGFCNCGLLPCLSNKDSRRG*TGLGAL
Trigger: AAGAGCCCCCAGCCCGGTCCATCCACGTCTGGAGTC...CTTATTGGAAAGACAAGGCAATAAACCACAGTTACAAAACCCAGGGTCCCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GCCTCAAGGGAGCCAAAGTCTGTTCAGAAAACAAACTCCAACACGTCTAAAAGAGGGGTAGGGTGGGGCTaGTCCAGTGGACAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ASREPKSVQKTNSNTSKRGVGWG*SSGQSS
Trigger: AGAGCTCTGTCCACTGGACCAGCCCCACCCTACCCC...TCTTTTAGACGTGTTGGAGTTTGTTTTCTGAACAGACTTTGGCTCCCTTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GCCTCAAGGGAGCCAAAGTCTGTTCAGAAAACAAACTCCAACACGTCTAAAAGAGATGGCAGCTCACCATaGACGTGGACCAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ASREPKSVQKTNSNTSKRDGSSP*TWTRAH
Trigger: GTGGGCTCTGGTCCACGTGCATGGTGAGCTGCCATC...TCTTTTAGACGTGTTGGAGTTTGTTTTCTGAACAGACTTTGGCTCCCTTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGTACTGTCAAACATCATaGCACCAGTCACCACAACCT +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQYCQTS*HQSPQP
Trigger: AGGTTGTGGTGACTGGTGCCATGATGTTTGACAGTA...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CCAGTGACAGTGGCTTCCCACCATCCCTTAAACTCCCCCTTTGCTGCTGCTGCTACTGGACGAGTCTTCTaGCCTTCATCTTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PVTVASHHPLNSPFAAAATGRVF*PSSFSH
Trigger: ATGAGAAAAAGATGAAGGCCAGAAGACTCGTCCAGT...AGCAGCAGCAGCAAAGGGGGAGTTTAAGGGATGGTGGGAAGCCACTGTCACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGTTCCACCTCAGACTGGCTCCTaGCTTCCTCTTTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LQDEAASWESFSSGCCVPPQTGS*LPLSSP
Trigger: TGGGGAAGAAAGAGGAAGTCAGGAGCCAGTCTGAGG...TGGAACACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGTTCCAAGAGTCCTAAGACCCTaGTCCTCTCCCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LQDEAASWESFSSGCCVPRVLRP*SSPQTP
Trigger: TGGAGTCTGGGGAGAGGAGCAGGGTCTTAGGACTCT...TGGAACACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GCCTCAAGGGAGCCAAAGTCTGTTCAGAAAACAAACTCCAACACGTCTAAAAGATGTCCTTTACAGTCCTaGGGTCAGCATGGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: ASREPKSVQKTNSNTSKRCPLQS*GQHGPE
Trigger: CTCGGGGCCATGCTGACCGCAGGACTGTAAAGGACA...TCTTTTAGACGTGTTGGAGTTTGTTTTCTGAACAGACTTTGGCTCCCTTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCATGGGACCCTGGGTTTTGTAACTGTGGTTTATTGCCTTGTCTTTCCAATAAGGCGTGTAGTTGGGGGTaGCCGAGTGCTTGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: PWDPGFCNCGLLPCLSNKACSWG*PSACES
Trigger: GCTTTCACAAGCACTCGGCCACCCCCAACTACACGC...CTTATTGGAAAGACAAGGCAATAAACCACAGTTACAAAACCCAGGGTCCCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGAGACTCCAGACGTGGATaGACCGGGCTGGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRDSRRG*TGLGAL
Trigger: AAGAGCCCCCAGCCCGGTCCATCCACGTCTGGAGTC...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GCCTCAAGGGAGCCAAAGTCTGTTCAGAAAACAAACTCCAACACGTCTAAAAGACTCCCGTGTTCTCTCTaGGAGCCCTGCAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: ASREPKSVQKTNSNTSKRLPCSL*EPCKNR
Trigger: CCTGTTCTTGCAGGGCTCCCAGAGAGAACACGGGAG...TCTTTTAGACGTGTTGGAGTTTGTTTTCTGAACAGACTTTGGCTCCCTTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp GTGTCTGAACACGTCTTTGTTCTTCTCTGGGCAGATCTGCTTGGCCAGACACATTCCAGTCATGGTAAATaGCACCACCATTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VSEHVFVLLWADLLGQTHSSHGK*HHHFPR
Trigger: CCTGGGGAAATGGTGGTGCCATTTACCATGACTGGA...ATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp CAAAACCAATTCCCCAGACAGTGTCTGAACACGTCTTaGTTCTTCTCTGGGCAGATCTGCTTGGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: QNQFPRQCLNTS*FFSGQICLARH
Trigger: GTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACACTGTCTGGGGAATTGGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp GCCTCAAGGGAGCCAAAGTCTGTTCAGAAAACAAACTCCAACACGTCTAAAAGACTCCACGTGCTGGCCTaGCACCTTCTCAGTGATCTT +
Preference number: 4 (lower is better)
Translates to: ASREPKSVQKTNSNTSKRLHVLA*HLLSDL
Trigger: AAGATCACTGAGAAGGTGTCAGGCCAGCACGTGGAG...TCTTTTAGACGTGTTGGAGTTTGTTTTCTGAACAGACTTTGGCTCCCTTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGGGTTTTTGTGAAATTTaGCAAAGCAATGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQGFCEI*QSNAGL
Trigger: GAGTCCTGCATTGCTTTGTCAAATTTCACAAAAACC...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGAGGCGCACCACGATGGTaGTGCCGATGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRGAPRW*CRCTWP
Trigger: AGGCCAAGTACATCGGCACCACCATCGTGGTGCGCC...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp CTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGTTCCATCCCAGCTACTTGAGTaGCTGAAGTGGGAGGATTGC +
Preference number: 4 (lower is better)
Translates to: LQDEAASWESFSSGCCVPSQLLE*LKWEDC
Trigger: GCAATCCTCCCACTTCAGCCACTCAAGTAGCTGGGA...TGGAACACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACCAGAACCAGAGCCCTaGTTTGACTCCGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRPEPEP*FDSAPA
Trigger: AGCAGGGGCGGAGTCAAACCAGGGCTCTGGTTCTGG...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGAGGTAATTATTGTCGATaGGCGGCCAGGCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRGNYCR*AARRPA
Trigger: TGCAGGGCGCCTGGCCGCTCATCGACAATAATTACC...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR TCA 90 bp CCATGGGACCCTGGGTTTTGTAACTGTGGTTTATTGCCTTGTCTTTCCAATAAGCTGCACTTTTGGGAGTaGAGCCTGGCTTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PWDPGFCNCGLLPCLSNKLHFWE*SLALCC
Trigger: ACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAG...CTTATTGGAAAGACAAGGCAATAAACCACAGTTACAAAACCCAGGGTCCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGATGCACAGGGCGTAGCTaGGCAAGGCTGCACAGAACT +
Preference number: 4 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRCTGRS*ARLHRT
Trigger: AGTTCTGTGCAGCCTTGCGCAGCTACGCCCTGTGCA...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGATCGTGTAAGAGTGTGTaGGTGCGTGTGGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRSCKSV*VRVAGT
Trigger: TGTGCCCGCCACACGCACGCACACACTCTTACACGA...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR GCA 90 bp CCGTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGTGGCTGTTAAACTGCTaGATCTTCTATCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PSCKMKLLLGNLLAQDAVWLLNC*IFYPPS
Trigger: TGAAGGCGGATAGAAGATGCAGCAGTTTAACAGCCA...CACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAAATGGATAAATAAATaGAATTGCAGAGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRKWINK*NCREEA
Trigger: CGCCTCCTCTCTGCAATTGCATTTATTTATCCATTT...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGTTCCATGGAGCTCGTTACCATaGGACCCTGGGTTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: LQDEAASWESFSSGCCVPWSSLP*DPGFCN
Trigger: GTTACAAAACCCAGGGTCCCATGGTAACGAGCTCCA...TGGAACACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGAGCCTGGTACACCTTCTaGTCCACACACTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRAWYTF*STHSWK
Trigger: CTTCCAGGAGTGTGTGGACCAGAAGGTGTACCAGGC...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
3UTR CAA 72 bp TTACCCTCAAACATTGGACTCCAAGTTCTTCAGCTTTaGGACTCTTGGACTTACACTGGTGGTTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPSNIGLQVLQL*DSWTYTGGLPG
Trigger: CCCTGGCAAACCACCAGTGTAAGTCCAAGAGTCCAAAAGCTGAAGAACTTGGAGTCCAATGTTTGAGGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp GCGGAGGATTCCAGCAAGACCAATTTAGCAGGACTCTaGCTAAAACCGAACAATCCAGAGACAAACACGGAA +
Preference number: 4 (lower is better)
Translates to: AEDSSKTNLAGL*LKPNNPETNTE
Trigger: TTCCGTGTTTGTCTCTGGATTGTTCGGTTTTAGCAAGAGTCCTGCTAAATTGGTCTTGCTGGAATCCTCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp CCGTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGTCTTTTAGCTCAGGATaGTGTGTTCCATATTCACGA +
Preference number: 4 (lower is better)
Translates to: PSCKMKLLLGNLLAQDAVSFSSG*CVPYSR
Trigger: TCGTGAATATGGAACACAGCATCCTGAGCTAAAAGA...CACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACTTGTGTGTCTTGTCTaGTGGGAGACACAGGTATGC +
Preference number: 4 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRLVCLV*WETQVC
Trigger: GCATACCTGTGTCTCCCAGCAGACAAGACACACAAG...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGATTCTCTGGGCAGATCTaGTTGGCCAGACACATTCTG +
Preference number: 4 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRFSGQI*LARHIL
Trigger: CAGAATGTGTCTGGCCAAGCAGATCTGCCCAGAGAA...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp CCGTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGTTCTTCCTGATTCACTaGGTAGTTTGTACAGATGAA +
Preference number: 4 (lower is better)
Translates to: PSCKMKLLLGNLLAQDAVFFLIH*VVCTDE
Trigger: TTCATCTGTACAAACTACCCAGTGAATCAGGAAGAA...CACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR TCA 90 bp CCATGGGACCCTGGGTTTTGTAACTGTGGTTTATTGCCTTGTCTTTCCAATAAGCTTCCAAGCAGAACGTaGGCAAACACAACCAAAATA +
Preference number: 4 (lower is better)
Translates to: PWDPGFCNCGLLPCLSNKLPSRT*ANTTKI
Trigger: TATTTTGGTTGTGTTTGCTCACGTTCTGCTTGGAAG...CTTATTGGAAAGACAAGGCAATAAACCACAGTTACAAAACCCAGGGTCCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR GCA 90 bp GTGTCTGAACACGTCTTTGTTCTTCTCTGGGCAGATCTGCTTGGCCAGACACATAATTTGACAAAGCAATaGAGGACTCGTTTCTATTTC +
Preference number: 4 (lower is better)
Translates to: VSEHVFVLLWADLLGQTHNLTKQ*RTRFYF
Trigger: GAAATAGAAACGAGTCCTGCATTGCTTTGTCAAATT...ATGTGTCTGGCCAAGCAGATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp TTACCATGGGACCCTGGGTTTTGTAACTGTGGTTTATaGCCTTGTCTTTCCAATAAGAATGCACAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LPWDPGFCNCGL*PCLSNKNAQQS
Trigger: AGACTGCTGTGCATTCTTATTGGAAAGACAAGGCAATAAACCACAGTTACAAAACCCAGGGTCCCATGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp GTTCAACTCCCACTTACGAGTGAGAACATGCGGTGTTaGGTTTTCTGTTCTTGTGTTAGTTTGCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: VQLPLTSENMRC*VFCSCVSLLRM
Trigger: CATTCTCAGCAAACTAACACAAGAACAGAAAACCAAACACCGCATGTTCTCACTCGTAAGTGGGAGTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
3UTR CAA 72 bp CGAAACTGTTTAATATTGAGTGCCAACTTGATTGGATaGGAGGATGCAAAGTATCGTTCCTGGGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RNCLILSANLIG*EDAKYRSWVCL
Trigger: CAGACACACCCAGGAACGATACTTTGCATCCTCCAATCCAATCAAGTTGGCACTCAATATTAAACAGTTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CCA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGATACTGTCAAACATCATaGCACCAGTCACCACAACCT +
Preference number: 4 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRYCQTS*HQSPQP
Trigger: AGGTTGTGGTGACTGGTGCCATGATGTTTGACAGTA...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CCA 90 bp GCCTCAAGGGAGCCAAAGTCTGTTCAGAAAACAAACTCCAACACGTCTAAAAGAAAGAGATGTGATTTCTaGACCATACCTGAGATTTGC +
Preference number: 4 (lower is better)
Translates to: ASREPKSVQKTNSNTSKRKRCDF*TIPEIC
Trigger: GCAAATCTCAGGTATGGTCCAGAAATCACATCTCTT...TCTTTTAGACGTGTTGGAGTTTGTTTTCTGAACAGACTTTGGCTCCCTTGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS CCA 90 bp CCCGGGCGGCGCGGGCCAATGGGGGTTCACGGCGGGACAGTCGGGTaGCCGGCTCCGTCCGGGGCTCCGCGAGCCGGGCTGAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: PGRRGPMGVHGGTVG*PAPSGAPRAGLREG
Trigger: TCCTTCCCTCAGCCCGGCTCGCGGAGCCCCGGACGGAGCCGGCCACCCGACTGTCCCGCCGTGAACCCCCATTGGCCCGCGCCGCCCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556950.1
CDS-3UTR CAA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCAGGCGCCCTGCACCTaGCAGGTCTGGAAGCGGTCG +
Preference number: 5 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRQAPCT*QVWKRS
Trigger: CGACCGCTTCCAGACCTGCAAGGTGCAGGGCGCCTG...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCTCCGTGCCTGAGCCCTaGGCAGCAGGCGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: AVPAHTWGSREDGARASLSVPEP*AAGGPW
Trigger: CCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGA...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATTCCGTGCCTGAGCCCTaGGCAGCAGGCGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHSVPEP*AAGGPW
Trigger: CCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGA...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGAAGCCTCTCCCCTGGGTaGAGCTGCGGCGCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGSLSPG*SCGASR
Trigger: CCGGCTCGCGCCGCAGCTCAACCCAGGGGAGAGGCT...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543599.5
CDS-3UTR CAA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATCAGGCGCCCTGCACCTaGCAGGTCTGGAAGCGGTCG +
Preference number: 5 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHQAPCT*QVWKRS
Trigger: CGACCGCTTCCAGACCTGCAAGGTGCAGGGCGCCTG...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTAAGTCGATCTGCTGGTaGAGGGGGCAGCCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: GGPSPHMGKPRGRSPRLPKSICW*RGQPRR
Trigger: CCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTT...AGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGACCGGCAGCTTCTCCTaGCACTTGGCCACGGCTGTC +
Preference number: 5 (lower is better)
Translates to: PRGRSQPTHGEAERTEPATGSFS*HLATAV
Trigger: GACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGGT...CGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGATCCGTGCCTGAGCCCTaGGCAGCAGGCGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGSVPEP*AAGGPW
Trigger: CCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGA...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACTCCGTGCCTGAGCCCTaGGCAGCAGGCGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHSVPEP*AAGGPW
Trigger: CCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGA...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCGAGCCTGCCTGCCCTTaGAGCCCCTCCTCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: AVPAHTWGSREDGARASLEPACP*SPSSVS
Trigger: GCTGACTGAGGAGGGGCTCAAAGGGCAGGCAGGCTC...GAGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCGAAAGCCGGGGCGGCTaGGCAATGGGCATCCTCGGC +
Preference number: 5 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAESRGG*AMGILG
Trigger: GCCGAGGATGCCCATTGCCAAGCCGCCCCGGCTTTC...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543599.5
CDS TCA 90 bp ACCACTAGCCTCTCCCCTGGGTTGAGCTGCGGCGCGAGCCGGCGCTaGATCGTCGCCGTGCCCTCCCGTCCACTTAGGAAAGCCGGGGCG +
Preference number: 5 (lower is better)
Translates to: TTSLSPGLSCGASRR*IVAVPSRPLRKAGA
Trigger: CGCCCCGGCTTTCCTAAGTGGACGGGAGGGCACGGCGACGATTCAGCGCCGGCTCGCGCCGCAGCTCAACCCAGGGGAGAGGCTAGTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543599.5
ENST00000555598.1
CDS-3UTR CAA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCGTGATCTTCAGGCTGTaGGCCCCGTGCTTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRVIFRL*APCLSP
Trigger: TGGGGACAAGCACGGGGCCAACAGCCTGAAGATCAC...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGACCGGCAGCTTCTCCTaGCACTTGGCCACGGCTGTC +
Preference number: 5 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPTGSFS*HLATAV
Trigger: GACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGGT...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGTCCGTGCCTGAGCCCTaGGCAGCAGGCGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: QEICTPWAVPAHTWGSRESVPEP*AAGGPW
Trigger: CCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGA...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS TCA 90 bp TCTCCCTCGAGGTTCCCGCCCGTCGTGGCCCCAGGCCACCCATCCTaGCTGGGTTTGGCCTGCCTCCAGCACCCCCTTCAAGCACCTCGC +
Preference number: 5 (lower is better)
Translates to: SPSRFPPVVAPGHPS*LGLACLQHPLQAPR
Trigger: GCGAGGTGCTTGAAGGGGGTGCTGGAGGCAGGCCAAACCCAGTCAGGATGGGTGGCCTGGGGCCACGACGGGCGGGAACCTCGAGGGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CCA 90 bp AGAGATGGCTATGCCGGTCCGCGTGGCGCGCAGGGCCGGATGGTTTaGCGCTCTCTGCGAGGCCCGCAAGGCTGCACTTGGGAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: RDGYAGPRGAQGRMV*RSLRGPQGCTWEGF
Trigger: GAAGCCCTCCCAAGTGCAGCCTTGCGGGCCTCGCAGAGAGCGCCAAACCATCCGGCCCTGCGCGCCACGCGGACCGGCATAGCCATCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CCA 90 bp TCCAGAGAGATGGCTATGCCGGTCCGCGTGGCGCGCAGGGCCGGATaGTTTGGCGCTCTCTGCGAGGCCCGCAAGGCTGCACTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: SREMAMPVRVARRAG*FGALCEARKAALGR
Trigger: CCTCCCAAGTGCAGCCTTGCGGGCCTCGCAGAGAGCGCCAAACCATCCGGCCCTGCGCGCCACGCGGACCGGCATAGCCATCTCTCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CCA 90 bp CTTGGCACAGCTGCCACTCCAGAGAGATGGCTATGCCGGTCCGCGTaGCGCGCAGGGCCGGATGGTTTGGCGCTCTCTGCGAGGCCCGCA +
Preference number: 5 (lower is better)
Translates to: LGTAATPERWLCRSA*RAGPDGLALSARPA
Trigger: TGCGGGCCTCGCAGAGAGCGCCAAACCATCCGGCCCTGCGCGCCACGCGGACCGGCATAGCCATCTCTCTGGAGTGGCAGCTGTGCCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CCA 90 bp CCTCGAGGTTCCCGCCCGTCGTGGCCCCAGGCCACCCATCCTGACTaGGTTTGGCCTGCCTCCAGCACCCCCTTCAAGCACCTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: PRGSRPSWPQATHPD*VWPASSTPFKHLAA
Trigger: AGCAGCGAGGTGCTTGAAGGGGGTGCTGGAGGCAGGCCAAACCCAGTCAGGATGGGTGGCCTGGGGCCACGACGGGCGGGAACCTCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CAA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCAGGCGCCCTGCACCTaGCAGGTCTGGAAGCGGTCG +
Preference number: 5 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSQAPCT*QVWKRS
Trigger: CGACCGCTTCCAGACCTGCAAGGTGCAGGGCGCCTG...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAAAGTCGATCTGCTGGTaGAGGGGGCAGCCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: RQEICTPWAVPAHTWGSRKSICW*RGQPRR
Trigger: CCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTT...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGTCGATCTGCTGGTaGAGGGGGCAGCCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGKSICW*RGQPRR
Trigger: CCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTT...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GCGGCTGCCAGCCTGCGGGCACCGGTGCCCTCAGCATTGGTGTGGAAGGCCTGGACCGGCAGCTTCTCCTaGCACTTGGCCACGGCTGTC +
Preference number: 5 (lower is better)
Translates to: AAASLRAPVPSALVWKAWTGSFS*HLATAV
Trigger: GACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGGT...CCAGGCCTTCCACACCAATGCTGAGGGCACCGGTGCCCGCAGGCTGGCAGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CAA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCGCACACACACACACTaGCTGCAGGGGATCCCACCA +
Preference number: 5 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGRTHTH*LQGIPP
Trigger: TGGTGGGATCCCCTGCAGCAAGTGTGTGTGTGTGCG...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGGAACGTTCTCCTTTTTaGGCCGGGCACGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGERSPF*AGHGGG
Trigger: GCCACCACCGTGCCCGGCCAAAAAAGGAGAACGTTC...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCATTACGAGCGTGCCTaGCACACTGGCTGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGHYERA*HTGCLQ
Trigger: CTGCAGGCAGCCAGTGTGCAAGGCACGCTCGTAATG...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCCCGCAAGGCTGCACTaGGGAGGGCTTCAGTATGGT +
Preference number: 5 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGPARLH*GGLQYG
Trigger: ACCATACTGAAGCCCTCCCAAGTGCAGCCTTGCGGG...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CAA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCTAACCTTGCCACCTaGGCACAGCTGCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGPNLAT*AQLPLQ
Trigger: CTGGAGTGGCAGCTGTGCCAAGGTGGCAAGGTTAGG...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CAA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGACTGCTTCCTGAAGACTaGCCCCGGCTGCGCCCCCGT +
Preference number: 5 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGLLPED*PRLRPR
Trigger: ACGGGGGCGCAGCCGGGGCAAGTCTTCAGGAAGCAG...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS GCA 90 bp TGCCTCCAGCACCCCCTTCAAGCACCTCGCTGCTTCCTGAAGACTTaGCCCGGCTGCGCCCCCGTGCTGAGGGCCTGCGGGCCTAACCTT +
Preference number: 5 (lower is better)
Translates to: CLQHPLQAPRCFLKT*PGCAPVLRACGPNL
Trigger: AAGGTTAGGCCCGCAGGCCCTCAGCACGGGGGCGCAGCCGGGGCAAGTCTTCAGGAAGCAGCGAGGTGCTTGAAGGGGGTGCTGGAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CAA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGTTGCACTTGAGGATCTaGCACGGGGAGGTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWLHLRI*HGEVAA
Trigger: CGCAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAA...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGGCAGCACAGGCGTGTaGGTGACCTGCACGTTCAGG +
Preference number: 5 (lower is better)
Translates to: RQEICTPWAVPAHTWGSRGSTGV*VTCTFR
Trigger: CCTGAACGTGCAGGTCACCAACACGCCTGTGCTGCC...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGGGCAGCACAGGCGTGTaGGTGACCTGCACGTTCAGG +
Preference number: 5 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGGSTGV*VTCTFR
Trigger: CCTGAACGTGCAGGTCACCAACACGCCTGTGCTGCC...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CCCCACGGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGGCAGCACAGGCGTGTaGGTGACCTGCACGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PHGSASSSRPGLSVHCEGGSTGV*VTCTFR
Trigger: CCTGAACGTGCAGGTCACCAACACGCCTGTGCTGCC...CCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCCGTGGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGGCAGCACAGGCGTGTaGGTGACCTGCACGTTCAGG +
Preference number: 5 (lower is better)
Translates to: HARRSAPRGRSQPTHGEAGSTGV*VTCTFR
Trigger: CCTGAACGTGCAGGTCACCAACACGCCTGTGCTGCC...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGAAGATGATGGTGAGCTaGCTGGTGGCAGTGGCCGCT +
Preference number: 5 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGKMMVS*LVAVAA
Trigger: AGCGGCCACTGCCACCAGCAAGCTCACCATCATCTT...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCAAGATGATGGTGAGCTaGCTGGTGGCAGTGGCCGCT +
Preference number: 5 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLKMMVS*LVAVAA
Trigger: AGCGGCCACTGCCACCAGCAAGCTCACCATCATCTT...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGTGGTGCCGATGTACTaGGCCTGGATCTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHVVPMY*AWISTC
Trigger: GCACGTGGAGATCCAGGCCAAGTACATCGGCACCAC...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCGTGGTGCCGATGTACTaGGCCTGGATCTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAVVPMY*AWISTC
Trigger: GCACGTGGAGATCCAGGCCAAGTACATCGGCACCAC...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCCAGTCACCACAACCTaGTCACGTGCACTAGAAGGG +
Preference number: 5 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRPVTTT*SRALEG
Trigger: CCCTTCTAGTGCACGTGACAAGGTTGTGGTGACTGG...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS CCA 90 bp GCCGTGCCCTCCCGTCCACTTAGGAAAGCCGGGGCGGCTTGGCAATaGGCATCCTCGGCCCTCAATCCAAGGTCCGCACCTTCCCGTACG +
Preference number: 5 (lower is better)
Translates to: AVPSRPLRKAGAAWQ*ASSALNPRSAPSRT
Trigger: CGTACGGGAAGGTGCGGACCTTGGATTGAGGGCCGAGGATGCCCATTGCCAAGCCGCCCCGGCTTTCCTAAGTGGACGGGAGGGCACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543599.5
ENST00000555598.1
CDS-3UTR CAA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGATTGCACTTGAGGATCTaGCACGGGGAGGTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGLHLRI*HGEVAA
Trigger: CGCAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAA...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGTTGCACTTGAGGATCTaGCACGGGGAGGTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: VDTPGDLHPVGGPSPHMGLHLRI*HGEVAA
Trigger: CGCAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAA...CCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTGGGTGCCAGGCGCCCTGCACCTaGCAGGTCTGGAAGCGGTCG +
Preference number: 5 (lower is better)
Translates to: LALGHGCLVWEGLGGCGCQAPCT*QVWKRS
Trigger: CGACCGCTTCCAGACCTGCAAGGTGCAGGGCGCCTG...GCACCCACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CAA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACGTGATCTTCAGGCTGTaGGCCCCGTGCTTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHVIFRL*APCLSP
Trigger: TGGGGACAAGCACGGGGCCAACAGCCTGAAGATCAC...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp AGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCAGTCCTCCACAGCATaGACCACTTCCTCTGGCATG +
Preference number: 5 (lower is better)
Translates to: RGPCLSPWQQAVPGVLRGQSSTA*TTSSGM
Trigger: CATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACTG...GCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCAGTCCTCCACAGCATaGACCACTTCCTCTGGCATG +
Preference number: 5 (lower is better)
Translates to: GGPSPHMGKPRGRSPRLPQSSTA*TTSSGM
Trigger: CATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACTG...AGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATAAGTCGATCTGCTGGTaGAGGGGGCAGCCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHKSICW*RGQPRR
Trigger: CCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTT...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGACCGGCAGCTTCTCCTaGCACTTGGCCACGGCTGTC +
Preference number: 5 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRTGSFS*HLATAV
Trigger: GACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGGT...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCCAGTCACCACAACCTaGTCACGTGCACTAGAAGGG +
Preference number: 5 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPPVTTT*SRALEG
Trigger: CCCTTCTAGTGCACGTGACAAGGTTGTGGTGACTGG...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATCCTGCCCAGGAGCTCTaGCATCTGCAGGAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDPAQEL*HLQERE
Trigger: CTCTCTCTCCTGCAGATGCAAGAGCTCCTGGGCAGG...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGACCTGCCCAGGAGCTCTaGCATCTGCAGGAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGPAQEL*HLQERE
Trigger: CTCTCTCTCCTGCAGATGCAAGAGCTCCTGGGCAGG...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCTGATAATCGCTGCATaGCCACTGCCTCAGACTGGC +
Preference number: 5 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGLIIAA*PLPQTG
Trigger: GCCAGTCTGAGGCAGTGGCAATGCAGCGATTATCAG...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGACTGTTGATAGCAGGGTaGGGGGCCTTGGCTGTGCCG +
Preference number: 5 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGLLIAG*GALAVP
Trigger: CGGCACAGCCAAGGCCCCCAACCCTGCTATCAACAG...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp GGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATCAGCTGACGCTGGCCTaGTTGCACAGATGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GPCLSPWQQAVPGVLRGHQLTLA*LHRWSS
Trigger: TGAGCTCCATCTGTGCAACAAGGCCAGCGTCAGCTG...ATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp GAGGGGTCCGTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGTCTTGCATCGTTTCCTaGACGGGGTGCTTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: EGSVPEPLAAGGPWRSAGSCIVS*TGCFGD
Trigger: GTCCCCAAAGCACCCCGTCAAGGAAACGATGCAAGA...CCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGCCTGCGGGCCTAACCTaGCCACCTTGGCACAGCTGC +
Preference number: 5 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMPAGLT*PPWHSC
Trigger: GCAGCTGTGCCAAGGTGGCAAGGTTAGGCCCGCAGG...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS TCA 90 bp GGGCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTTaGGGATCTTGCACGGGGAGGTGGCTCCCTGCTGTTGCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: GRGCPTWRSRTQSCT*GSCTGRWLPAVAAP
Trigger: AGGGGCAGCAACAGCAGGGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556658.1
CDS CCA 90 bp CCTTTCCAACCAGACTGCCGACCCCAAGCTTCCACCGACGCCCCCTaGCTCATCAGTCGCACTCAGACGCGACACCGGTGCAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PFQPDCRPQASTDAP*LISRTQTRHRCRRL
Trigger: CAGCCTCCTGCACCGGTGTCGCGTCTGAGTGCGACTGATGAGCCAGGGGGCGTCGGTGGAAGCTTGGGGTCGGCAGTCTGGTTGGAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425933.6
CDS CCA 90 bp ATCGTCGCCGTGCCCTCCCGTCCACTTAGGAAAGCCGGGGCGGCTTaGCAATGGGCATCCTCGGCCCTCAATCCAAGGTCCGCACCTTCC +
Preference number: 5 (lower is better)
Translates to: IVAVPSRPLRKAGAA*QWASSALNPRSAPS
Trigger: GGAAGGTGCGGACCTTGGATTGAGGGCCGAGGATGCCCATTGCCAAGCCGCCCCGGCTTTCCTAAGTGGACGGGAGGGCACGGCGACGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543599.5
ENST00000555598.1
CDS-3UTR CAA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGTTGCACTTGAGGATCTaGCACGGGGAGGTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: QEICTPWAVPAHTWGSRELHLRI*HGEVAA
Trigger: CGCAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAA...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GGATCGGCGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGGCAGCACAGGCGTGTaGGTGACCTGCACGTTCAGG +
Preference number: 5 (lower is better)
Translates to: GSASSSRPGLSVHCEGEGGSTGV*VTCTFR
Trigger: CCTGAACGTGCAGGTCACCAACACGCCTGTGCTGCC...TCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCGCCGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCAAGATGATGGTGAGCTaGCTGGTGGCAGTGGCCGCT +
Preference number: 5 (lower is better)
Translates to: HARRSAPRGRSQPTHGEAKMMVS*LVAVAA
Trigger: AGCGGCCACTGCCACCAGCAAGCTCACCATCATCTT...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAAAGATGATGGTGAGCTaGCTGGTGGCAGTGGCCGCT +
Preference number: 5 (lower is better)
Translates to: RQEICTPWAVPAHTWGSRKMMVS*LVAVAA
Trigger: AGCGGCCACTGCCACCAGCAAGCTCACCATCATCTT...TCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCAGCTTCTCCTTGCACTaGGCCACGGCTGTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: EPLAAGGPWRSAGPWWTRSFSLH*ATAVSY
Trigger: ATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCT...GCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGCTTCTCCTTGCACTaGGCCACGGCTGTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHASFSLH*ATAVSY
Trigger: ATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCT...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGACCGGCAGCTTCTCCTaGCACTTGGCCACGGCTGTC +
Preference number: 5 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMTGSFS*HLATAV
Trigger: GACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGGT...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGACCTGCCCAGGAGCTCTaGCATCTGCAGGAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGPAQEL*HLQERE
Trigger: CTCTCTCTCCTGCAGATGCAAGAGCTCCTGGGCAGG...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CTGCTGGTTGAGGGGGCAGCCCCGCAGGCAGAGGTAGAGACCCTGGCTGTCCCACCTGCCCAGGAGCTCTaGCATCTGCAGGAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LLVEGAAPQAEVETLAVPPAQEL*HLQERE
Trigger: CTCTCTCTCCTGCAGATGCAAGAGCTCCTGGGCAGG...TGGGACAGCCAGGGTCTCTACCTCTGCCTGCGGGGCTGCCCCCTCAACCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CAA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGCTCACGAGCATGCCTaGAACACAGGCTGCCTGTGC +
Preference number: 5 (lower is better)
Translates to: QEICTPWAVPAHTWGSREAHEHA*NTGCLC
Trigger: GCACAGGCAGCCTGTGTTCAAGGCATGCTCGTGAGC...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp GAGGGGGCAGCCCCGCAGGCAGAGGTAGAGACCCTGGCTGTCCCAGTCCTCCACTTGCACTTGAGGATCTaGCACGGGGAGGTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: EGAAPQAEVETLAVPVLHLHLRI*HGEVGR
Trigger: CCTACCCACCTCCCCGTGCAAGATCCTCAAGTGCAA...GTGGAGGACTGGGACAGCCAGGGTCTCTACCTCTGCCTGCGGGGCTGCCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554387.5
CDS-3UTR CAA 90 bp GGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCCCTCTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCAC +
Preference number: 5 (lower is better)
Translates to: GGPSPHMGKPRGRSPRLPLQNSE*HLRILH
Trigger: GTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAG...AGGGAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CCCACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGAAGATGATGGTGAGCTaGCTGGTGGCAGTGGCCGCT +
Preference number: 5 (lower is better)
Translates to: PTRPHTVLAEGAGPLGGRKMMVS*LVAVAA
Trigger: AGCGGCCACTGCCACCAGCAAGCTCACCATCATCTT...CCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAAAGATGATGGTGAGCTaGCTGGTGGCAGTGGCCGCT +
Preference number: 5 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTKMMVS*LVAVAA
Trigger: AGCGGCCACTGCCACCAGCAAGCTCACCATCATCTT...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGTGGTGCCGATGTACTaGGCCTGGATCTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHVVPMY*AWISTC
Trigger: GCACGTGGAGATCCAGGCCAAGTACATCGGCACCAC...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CGGCCCACCTGGCGCACCACGATGGTGGTGCCGATGTACTTGGCCTGGATCTCCGTGGTGCCGATGTACTaGGCCTGGATCTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: RPTWRTTMVVPMYLAWISVVPMY*AWISTC
Trigger: GCACGTGGAGATCCAGGCCAAGTACATCGGCACCAC...GGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGCCAGGTGGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CAA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACAGTCCTCCACAGCATaGACCACTTCCTCTGGCATG +
Preference number: 5 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGQSSTA*TTSSGM
Trigger: CATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACTG...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGAAGTCGATCTGCTGGTaGAGGGGGCAGCCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGKSICW*RGQPRR
Trigger: CCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTT...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACAAGCTTCTCCTTGCACTaGGCCACGGCTGTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: PEPLAAGGPWRSAGPWWTSFSLH*ATAVSY
Trigger: ATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCT...TGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCAGGTGCAGTTTGTCTTaGTTGGAGTGGAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: PVGGPSPHMGKPRGRSPRRCSLS*LEWSIL
Trigger: CAAGATGCTCCACTCCAACAAAGACAAACTGCACCT...GCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGTCCGTGCCTGAGCCCTaGGCAGCAGGCGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: QYVHAVTLHTGRRHVDAVSVPEP*AAGGPW
Trigger: CCAGGGACCGCCTGCTGCCAAGGGCTCAGGCACGGA...CACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGACCAGTCACCACAACCTaGTCACGTGCACTAGAAGGG +
Preference number: 5 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRPVTTT*SRALEG
Trigger: CCCTTCTAGTGCACGTGACAAGGTTGTGGTGACTGG...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGCCGGCTCTGCATGGCTaGTTCCTGAAATTCATGCAG +
Preference number: 5 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWPALHG*FLKFMQ
Trigger: CTGCATGAATTTCAGGAACAAGCCATGCAGAGCCGG...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGAGCCCTGCAGTACTTaGGCTGCTCTGTGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMEPCST*AALWPH
Trigger: GTGAGGCCACAGAGCAGCCAAAGTACTGCAGGGCTC...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACACTGCCCTTGTGTGTCTaGTCTGCTGGGAGACACAGG +
Preference number: 5 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTLPLCV*SAGRHR
Trigger: CCTGTGTCTCCCAGCAGACAAGACACACAAGGGCAG...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAATGAATGTTTTCGCCTaGGGATCTGGGCTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: LGSRRSLAFCGAMVDTPGMNVFA*GSGLPG
Trigger: CCCAGGCAGCCCAGATCCCAAGGCGAAAACATTCAT...TCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCGTGGCCTACAAATGTTaGTGCCAGGAAGGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLVAYKC*CQEGRE
Trigger: TTCCCTTCCTTCCTGGCACAAACATTTGTAGGCCAC...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAAACCCACTTCCGAGTaGTCTAGGTCTGGGCAGGAT +
Preference number: 5 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHAKPTSE*SRSGQD
Trigger: ATCCTGCCCAGACCTAGACAACTCGGAAGTGGGTTT...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425933.6
CDS TCA 90 bp GGGCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTTaGGGATCTTGCACGGGGAGGTGGCTCTCGGATTTCCACACGCTC +
Preference number: 5 (lower is better)
Translates to: GRGCPTWRSRTQSCT*GSCTGRWLSDFHTL
Trigger: GAGCGTGTGGAAATCCGAGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650169.1
CDS-3UTR CAA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTGTGATCTTCAGGCTGTaGGCCCCGTGCTTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: RAAVGRAFQCIARGKELTVIFRL*APCLSP
Trigger: TGGGGACAAGCACGGGGCCAACAGCCTGAAGATCAC...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CGCAGCCGCCCTGCCTGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCGTGATCTTCAGGCTGTaGGCCCCGTGCTTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: RSRPAWQVPSPLIQVQFVVIFRL*APCLSP
Trigger: TGGGGACAAGCACGGGGCCAACAGCCTGAAGATCAC...GACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCAGGCAGGGCGGCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CAA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGAGCTTCTCCTTGCACTaGGCCACGGCTGTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGSFSLH*ATAVSY
Trigger: ATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCT...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp GTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGCGCCTCTCATACAGGTGCAGTTaGTCTTTGTTGGAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: VGGPSPHMGKPRGRSPRLSYRCS*SLLEWS
Trigger: GCTCCACTCCAACAAAGACAAACTGCACCTGTATGA...GAGGCGCGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp ACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCCAGTCACCACAACCTaGTCACGTGCACTAGAAGGG +
Preference number: 5 (lower is better)
Translates to: TRQEICTPWAVPAHTWGSPVTTT*SRALEG
Trigger: CCCTTCTAGTGCACGTGACAAGGTTGTGGTGACTGG...GCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGCCAGTCACCACAACCTaGTCACGTGCACTAGAAGGG +
Preference number: 5 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGPVTTT*SRALEG
Trigger: CCCTTCTAGTGCACGTGACAAGGTTGTGGTGACTGG...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGCAGGAAATGGTCAGCTaGGAGGAACGGTGCCCTCGA +
Preference number: 5 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMQEMVS*EERCPR
Trigger: TCGAGGGCACCGTTCCTCCAAGCTGACCATTTCCTG...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS GCA 90 bp GCGCAGGGCCGGATGGTTTGGCGCTCTCTGCGAGGCCCGCAAGGCTaGACTTGGGAGGGCTTCAGTATGGTGACCTTTCCTAACTCTGTC +
Preference number: 5 (lower is better)
Translates to: AQGRMVWRSLRGPQG*TWEGFSMVTFPNSV
Trigger: GACAGAGTTAGGAAAGGTCACCATACTGAAGCCCTCCCAAGTGCAGCCTTGCGGGCCTCGCAGAGAGCGCCAAACCATCCGGCCCTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CAA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCCTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCAC +
Preference number: 5 (lower is better)
Translates to: HARRSAPRGRSQPTHGEALQNSE*HLRILH
Trigger: GTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAG...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp TGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCAC +
Preference number: 5 (lower is better)
Translates to: CLSPWQQAVPGVLRGHGGLQNSE*HLRILH
Trigger: GTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAG...TCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CCACCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTCAGGCGCCCTGCACCTaGCAGGTCTGGAAGCGGTCG +
Preference number: 5 (lower is better)
Translates to: PPTDRPQCVMFPSLCPCVQAPCT*QVWKRS
Trigger: CGACCGCTTCCAGACCTGCAAGGTGCAGGGCGCCTG...AACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp GTCCCAGTCCTCCACAGCATTGACCACTTCCTCTGGCATGCGGACGGCAAAGGTAAGTCGATCTGCTGGTaGAGGGGGCAGCCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: VPVLHSIDHFLWHADGKGKSICW*RGQPRR
Trigger: CCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTT...ACCTTTGCCGTCCGCATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CAA 90 bp CACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGGACGGAGCCCGTGCAGTTTGTCTTTGTaGGAGTGGAGCATCTTGACA +
Preference number: 5 (lower is better)
Translates to: HPVGGPSPHMGKPRGRSPCSLSL*EWSILT
Trigger: TGTCAAGATGCTCCACTCCAACAAAGACAAACTGCA...CGGGCTCCGTCCTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGCCTGCCCAGGAGCTCTaGCATCTGCAGGAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGPAQEL*HLQERE
Trigger: CTCTCTCTCCTGCAGATGCAAGAGCTCCTGGGCAGG...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CTCCCCTTGCTAGCCTGCAGGTTCACCTCTCCCAAGAGTCCAGGGTCTGTATCGAGGAGGCGGCCACTTTaGGCGGCCTCCATGCGTGGT +
Preference number: 5 (lower is better)
Translates to: LPLLACRFTSPKSPGSVSRRRPL*AASMRG
Trigger: ACCACGCATGGAGGCCGCCAAAAGTGGCCGCCTCCT...CGATACAGACCCTGGACTCTTGGGAGAGGTGAACCTGCAGGCTAGCAAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGCTGACGCTGGCCTTGTaGCACAGATGGAGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGLTLAL*HRWSSE
Trigger: CTCTGAGCTCCATCTGTGCAACAAGGCCAGCGTCAG...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTAGCTTCTCCTTGCACTaGGCCACGGCTGTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: RAAVGRAFQCIARGKELTSFSLH*ATAVSY
Trigger: ATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCT...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp GGGAGTCATCCCAGATCTCAGGCTATCCCACCCATCTCATCCCAGAGGGCACCAACCGGCAGCTTCTCCTaGCACTTGGCCACGGCTGTC +
Preference number: 5 (lower is better)
Translates to: GSHPRSQAIPPISSQRAPTGSFS*HLATAV
Trigger: GACAGCCGTGGCCAAGTGCAAGGAGAAGCTGCCGGT...TGGTGCCCTCTGGGATGAGATGGGTGGGATAGCCTGAGATCTGGGATGACTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp AGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCTGCAGTTTGTCTTTGTaGGAGTGGAGCATCTTGACA +
Preference number: 5 (lower is better)
Translates to: SPWQQAVPGVLRGHGGHACSLSL*EWSILT
Trigger: TGTCAAGATGCTCCACTCCAACAAAGACAAACTGCA...GGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GTGCCTGAGCCCTTGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGTGCAGTTTGTCTTTGTaGGAGTGGAGCATCTTGACA +
Preference number: 5 (lower is better)
Translates to: VPEPLAAGGPWRSAGPWWCSLSL*EWSILT
Trigger: TGTCAAGATGCTCCACTCCAACAAAGACAAACTGCA...CCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCAAGGGCTCAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp TGGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGAAGGTGCAGTTTGTCTTaGTTGGAGTGGAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: WQQAVPGVLRGHGGHARRRCSLS*LEWSIL
Trigger: CAAGATGCTCCACTCCAACAAAGACAAACTGCACCT...TCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GGCAGCAGGCGGTCCCTGGCGTTCTGCGGGGCCATGGTGGACACGCCAGGAGATTCATACAGGTGCAGTTaGTCTTTGTTGGAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: GSRRSLAFCGAMVDTPGDSYRCS*SLLEWS
Trigger: GCTCCACTCCAACAAAGACAAACTGCACCTGTATGA...ATCTCCTGGCGTGTCCACCATGGCCCCGCAGAACGCCAGGGACCGCCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCTCATACAGGTGCAGTTaGTCTTTGTTGGAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: HARRSAPRGRSQPTHGEASYRCS*SLLEWS
Trigger: GCTCCACTCCAACAAAGACAAACTGCACCTGTATGA...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp GGGAGTCATCCCAGATCTCAGGCTATCCCACCCATCTCATCCCAGAGGGCACCAGCAGGGTTGGGGGCCTaGGCTGTGCCGATTCAGAAG +
Preference number: 5 (lower is better)
Translates to: GSHPRSQAIPPISSQRAPAGLGA*AVPIQK
Trigger: CTTCTGAATCGGCACAGCCAAGGCCCCCAACCCTGC...TGGTGCCCTCTGGGATGAGATGGGTGGGATAGCCTGAGATCTGGGATGACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCGAGAGTCAGTTGGCTTCTCTTaGCTTCTGTCTGTCCGTCTG +
Preference number: 5 (lower is better)
Translates to: QEICTPWAVPAHTWGSRESVGFS*LLSVRL
Trigger: CAGACGGACAGACAGAAGCAAAGAGAAGCCAACTGA...CTCTCGGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CGAGCAGCAGTCGGCCGGGCCTTTCAGTGCATTGCGAGGGGGAAGGAGCTGACTGTCTCCCAAGGGGCTTaGCGCCAGTATGAGCTTATG +
Preference number: 5 (lower is better)
Translates to: RAAVGRAFQCIARGKELTVSQGA*RQYELM
Trigger: CATAAGCTCATACTGGCGCAAAGCCCCTTGGGAGAC...AGTCAGCTCCTTCCCCCTCGCAATGCACTGAAAGGCCCGGCCGACTGCTGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp TCTGGAGCCCGGGCCCTTCCTTCGGTCTGGGTGTGTCTGTGCCCATGCCACTGTACAGGCAAGTGGGAATaGATGGCCAAGGAGCAGGGT +
Preference number: 5 (lower is better)
Translates to: SGARALPSVWVCLCPCHCTGKWE*MAKEQG
Trigger: ACCCTGCTCCTTGGCCATCAATTCCCACTTGCCTGT...ACAGTGGCATGGGCACAGACACACCCAGACCGAAGGAAGGGCCCGGGCTCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCAACTCAGAGTTGCACTaGAGGATCTTGCACGGGGAG +
Preference number: 5 (lower is better)
Translates to: TCTGTHSSQVNMGREATGNSELH*RILHGE
Trigger: CTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTT...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGCTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCAC +
Preference number: 5 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMLQNSE*HLRILH
Trigger: GTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAG...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACGTGGTGCCGATGTACTaGGCCTGGATCTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHVVPMY*AWISTC
Trigger: GCACGTGGAGATCCAGGCCAAGTACATCGGCACCAC...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGCAGTCCTCCACAGCATaGACCACTTCCTCTGGCATG +
Preference number: 5 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGQSSTA*TTSSGM
Trigger: CATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACTG...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGAAGCCTGCAGTTTGTCTTTGTaGGAGTGGAGCATCTTGACA +
Preference number: 5 (lower is better)
Translates to: HARRSAPRGRSQPTHGEACSLSL*EWSILT
Trigger: TGTCAAGATGCTCCACTCCAACAAAGACAAACTGCA...GGCTTCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CTGCTGGTTGAGGGGGCAGCCCCGCAGGCAGAGGTAGAGACCCTGGCTGTCCCAAGGTGCAGTTTGTCTTaGTTGGAGTGGAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: LLVEGAAPQAEVETLAVPRCSLS*LEWSIL
Trigger: CAAGATGCTCCACTCCAACAAAGACAAACTGCACCT...TGGGACAGCCAGGGTCTCTACCTCTGCCTGCGGGGCTGCCCCCTCAACCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CAA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGTCATACAGGTGCAGTTaGTCTTTGTTGGAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGSYRCS*SLLEWS
Trigger: GCTCCACTCCAACAAAGACAAACTGCACCTGTATGA...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATCTGCTGCTTCCCATATaGCCAACTGCCTTATGTCCT +
Preference number: 5 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHLLLPI*PTALCP
Trigger: AGGACATAAGGCAGTTGGCAATATGGGAAGCAGCAG...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CCACCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTAACCAGAGCCCTGGTTaGACTCCGCCCCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PPTDRPQCVMFPSLCPCVNQSPG*TPPLLW
Trigger: CCACAGCAGGGGCGGAGTCAAACCAGGGCTCTGGTT...AACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS CCA 90 bp GGCCGGATGGTTTGGCGCTCTCTGCGAGGCCCGCAAGGCTGCACTTaGGAGGGCTTCAGTATGGTGACCTTTCCTAACTCTGTCGCTTAT +
Preference number: 5 (lower is better)
Translates to: GRMVWRSLRGPQGCT*EGFSMVTFPNSVAY
Trigger: ATAAGCGACAGAGTTAGGAAAGGTCACCATACTGAAGCCCTCCCAAGTGCAGCCTTGCGGGCCTCGCAGAGAGCGCCAAACCATCCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CAA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGGGCAGCACAGGCGTGTaGGTGACCTGCACGTTCAGG +
Preference number: 5 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQGSTGV*VTCTFR
Trigger: CCTGAACGTGCAGGTCACCAACACGCCTGTGCTGCC...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTCAGTCCTCCACAGCATaGACCACTTCCTCTGGCATG +
Preference number: 5 (lower is better)
Translates to: LLLALGHGCLVWEGLGGCQSSTA*TTSSGM
Trigger: CATGCCAGAGGAAGTGGTCAATGCTGTGGAGGACTG...ACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CAA 90 bp CTTCTCCTTGCACTTGGCCACGGCTGTCTCGTATGGGAAGGTCTCGGGGGCTGTAGCTTCTCCTTGCACTaGGCCACGGCTGTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: LLLALGHGCLVWEGLGGCSFSLH*ATAVSY
Trigger: ATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCT...ACAGCCCCCGAGACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CAA 90 bp ACCCGCCCACACACGGTTCTGGCAGAGGGAGCAGGACCTCTTGGAGGGAGGGGGTGCAGTTTGTCTTTGTaGGAGTGGAGCATCTTGACA +
Preference number: 5 (lower is better)
Translates to: TRPHTVLAEGAGPLGGRGCSLSL*EWSILT
Trigger: TGTCAAGATGCTCCACTCCAACAAAGACAAACTGCA...CCCCCTCCCTCCAAGAGGTCCTGCTCCCTCTGCCAGAACCGTGTGTGGGCGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp ATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGAGGTGCAGTTTGTCTTaGTTGGAGTGGAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: MVDTPGDLHPVGGPSPHMRCSLS*LEWSIL
Trigger: CAAGATGCTCCACTCCAACAAAGACAAACTGCACCT...CATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
ENST00000557301.2
CDS-3UTR CAA 90 bp CATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATCTCATGGCATTTAGTTaGAAGAGAAGGGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: HGGHARRSAPRGRSQPTHLMAFS*KRRGFR
Trigger: CCTGAAGCCCCTTCTCTTCAAACTAAATGCCATGAG...ATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp TGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACATGGGGATTAGTTTCTGTTCCTTaGCCTTCAGGGTTCTGCTAC +
Preference number: 5 (lower is better)
Translates to: WTRQEICTPWAVPAHTWGLVSVP*PSGFCY
Trigger: GTAGCAGAACCCTGAAGGCAAAGGAACAGAAACTAA...TCCCCATGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp TGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGTGAGGGGCTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCAC +
Preference number: 5 (lower is better)
Translates to: CTRGDTPHRSQTRGRSEGLQNSE*HLRILH
Trigger: GTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAG...CCCCTCACTGCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CTGCCTGGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGGTGATCTTCAGGCTGTaGGCCCCGTGCTTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: LPGRSRVLSYRCSLSLLEVIFRL*APCLSP
Trigger: TGGGGACAAGCACGGGGCCAACAGCCTGAAGATCAC...CTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CAA 90 bp AGGGGAGCTGCTCTCCCTCTCACACAGCTCTACTGTCAAACATCATGGCACCAGGTGGTGCCGATGTACTaGGCCTGGATCTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: RGAALPLTQLYCQTSWHQVVPMY*AWISTC
Trigger: GCACGTGGAGATCCAGGCCAAGTACATCGGCACCAC...CTGGTGCCATGATGTTTGACAGTAGAGCTGTGTGAGAGGGAGAGCAGCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp GTGGAAGGCCTGGAAGTCGATCTGCTGGTTGAGGGGGCAGCCCCGCAGGCAGAGTGCAGTTTGTCTTTGTaGGAGTGGAGCATCTTGACA +
Preference number: 5 (lower is better)
Translates to: VEGLEVDLLVEGAAPQAECSLSL*EWSILT
Trigger: TGTCAAGATGCTCCACTCCAACAAAGACAAACTGCA...CTCTGCCTGCGGGGCTGCCCCCTCAACCAGCAGATCGACTTCCAGGCCTTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CAA 90 bp GAGGGGGAAGGAGCTGACTCTGACGGTTCCCAGTGTGTCTCTGGTGGGGGTGGGTCATACAGGTGCAGTTaGTCTTTGTTGGAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: EGEGADSDGSQCVSGGGGSYRCS*SLLEWS
Trigger: GCTCCACTCCAACAAAGACAAACTGCACCTGTATGA...CCCACCCCCACCAGAGACACACTGGGAACCGTCAGAGTCAGCTCCTTCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp CCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACACAAACCAAGAATACTTaGTGGCTAGTGCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: PWWTRQEICTPWAVPAHTQTKNT*WLVPFS
Trigger: GCTAAATGGCACTAGCCACAAAGTATTCTTGGTTTG...TGTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACCAGACACATTCTGCTTaGGCTGAACGGCCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHQTHSA*AERPGE
Trigger: CTCTCCAGGCCGTTCAGCCAAAGCAGAATGTGTCTG...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp GCCATGGTGGACACGCCAGGAGATCTGCACCCCGTGGGCGGTCCCAGCCCACACAATTTAGCAGGACTCTaGCTAAAACCGAACAATCCA +
Preference number: 5 (lower is better)
Translates to: AMVDTPGDLHPVGGPSPHNLAGL*LKPNNP
Trigger: TGGATTGTTCGGTTTTAGCAAGAGTCCTGCTAAATT...GTGTGGGCTGGGACCGCCCACGGGGTGCAGATCTCCTGGCGTGTCCACCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CATCTTGACATCCTCCAACGCGTAGTAGGCGGCCAGTGTGAAGTTCACGTCGCCAGCTTCTCCTTGCACTaGGCCACGGCTGTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: HLDILQRVVGGQCEVHVASFSLH*ATAVSY
Trigger: ATACGAGACAGCCGTGGCCAAGTGCAAGGAGAAGCT...GGCGACGTGAACTTCACACTGGCCGCCTACTACGCGTTGGAGGATGTCAAGATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CAA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCCCGTCATCATCTACATaGGGTATTTCTCCTGATGCT +
Preference number: 5 (lower is better)
Translates to: TCTGTHSSQVNMGREATGPSSST*GISPDA
Trigger: AGCATCAGGAGAAATACCCAATGTAGATGATGACGG...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CCACCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTCAGTGGACAGAGCTCTaGCATCGTTTCCTTGACGGG +
Preference number: 5 (lower is better)
Translates to: PPTDRPQCVMFPSLCPCVQWTEL*HRFLDG
Trigger: CCCGTCAAGGAAACGATGCAAGAGCTCTGTCCACTG...AACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp ACCTGCACTGGTACCCACAGCAGCCAGGTGAACATGGGCAGGGAGGCCACAGGCCATTGTTTCAAGGGTTaGGTAAGTAAGGCCAATCAG +
Preference number: 5 (lower is better)
Translates to: TCTGTHSSQVNMGREATGHCFKG*VSKANQ
Trigger: CTGATTGGCCTTACTTACCAAACCCTTGAAACAATG...GCCTGTGGCCTCCCTGCCCATGTTCACCTGGCTGCTGTGGGTACCAGTGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp GATCACAGCCCTCATTCCGGAACGCCACTGACATTACGAGCGTGCCTTGCACACCCTGGAGTGGGTCAGTaGGCTTCTCTTTGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: DHSPHSGTPLTLRACLAHPGVGQ*ASLCFC
Trigger: ACAGAAGCAAAGAGAAGCCAACTGACCCACTCCAGG...GTGTGCAAGGCACGCTCGTAATGTCAGTGGCGTTCCGGAATGAGGGCTGTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CAGGCAGAGGTAGAGACCCTGGCTGTCCCAGTCCTCCACAGCATTGACCACTTCTCATACAGGTGCAGTTaGTCTTTGTTGGAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: QAEVETLAVPVLHSIDHFSYRCS*SLLEWS
Trigger: GCTCCACTCCAACAAAGACAAACTGCACCTGTATGA...GAAGTGGTCAATGCTGTGGAGGACTGGGACAGCCAGGGTCTCTACCTCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CAA 90 bp CCACCCACTGACAGGCCCCAGTGTGTGATGTTCCCTTCCCTGTGTCCATGTGTTGATGCTGGGTACGTTTaGTCCTTTCCAGTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: PPTDRPQCVMFPSLCPCVDAGYV*SFPVWF
Trigger: GAACCAGACTGGAAAGGACAAAACGTACCCAGCATC...AACACATGGACACAGGGAAGGGAACATCACACACTGGGGCCTGTCAGTGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp GTGCCCTCGAGGTGGTCAGTAACGGGAGGGCTGAAGAGAACAGCGGCCAGTTACGTCCATGTGTTCTCATaGTTCAACTCCCACTTACGA +
Preference number: 5 (lower is better)
Translates to: VPSRWSVTGGLKRTAASYVHVFS*FNSHLR
Trigger: TCGTAAGTGGGAGTTGAACAATGAGAACACATGGAC...GTAACTGGCCGCTGTTCTCTTCAGCCCTCCCGTTACTGACCACCTCGAGGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CAAGTCCACTCAAGAAGGCGGTTGCCGGAGTTTTCCTGCTCCACCCTGGGGAGGTCAGCTTTTGGACTCTaGGACTTACACTGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: QVHSRRRLPEFSCSTLGRSAFGL*DLHWWF
Trigger: AAACCACCAGTGTAAGTCCAAGAGTCCAAAAGCTGA...CCTCCCCAGGGTGGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTGGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp TTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACACGTGGACGCAGCTGGGAAGAGAGATaGGGGTCCCCTCTGAATACA +
Preference number: 5 (lower is better)
Translates to: FTVCTRGDTPHRSQTRGRSWEER*GSPLNT
Trigger: TGTATTCAGAGGGGACCCCAATCTCTCTTCCCAGCT...GCGTCCACGTGTCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CTGGCTGCACTTTTGGGAGTGAAGCCTGGCTTTGTGCTGTGGGCACAGCAGCACTGCAGTTTGTCTTTGTaGGAGTGGAGCATCTTGACA +
Preference number: 5 (lower is better)
Translates to: LAALLGVKPGFVLWAQQHCSLSL*EWSILT
Trigger: TGTCAAGATGCTCCACTCCAACAAAGACAAACTGCA...GTGCTGCTGTGCCCACAGCACAAAGCCAGGCTTCACTCCCAAAAGTGCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp ACTGGAGTCAAACATCAAGTCCTCCCGGAGCCGGAGAGCCCTGCAGTACTTTGGTGTCTGAACACGTCTTaGTTCTTCTCTGGGCAGATC +
Preference number: 5 (lower is better)
Translates to: TGVKHQVLPEPESPAVLWCLNTS*FFSGQI
Trigger: GATCTGCCCAGAGAAGAACAAAGACGTGTTCAGACA...CCAAAGTACTGCAGGGCTCTCCGGCTCCGGGAGGACTTGATGTTTGACTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACAGGCGCCCTGCACCTaGCAGGTCTGGAAGCGGTCG +
Preference number: 5 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRQAPCT*QVWKRS
Trigger: CGACCGCTTCCAGACCTGCAAGGTGCAGGGCGCCTG...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS-3UTR CAA 90 bp GGCAGGTCCCGAGTCCTCTCATACAGGTGCAGTTTGTCTTTGTTGGAGTGGAGCAGGTGCAGTTTGTCTTaGTTGGAGTGGAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: GRSRVLSYRCSLSLLEWSRCSLS*LEWSIL
Trigger: CAAGATGCTCCACTCCAACAAAGACAAACTGCACCT...GCTCCACTCCAACAAAGACAAACTGCACCTGTATGAGAGGACTCGGGACCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554387.5
ENST00000557420.1
CDS-3UTR CAA 90 bp GATCACAGCCCTCATTCCGGAACGCCACTGACATTACGAGCGTGCCTTGCACACGCCAACTTGATTGGATaGGAGGATGCAAAGTATCGT +
Preference number: 5 (lower is better)
Translates to: DHSPHSGTPLTLRACLAHANLIG*EDAKYR
Trigger: ACGATACTTTGCATCCTCCAATCCAATCAAGTTGGC...GTGTGCAAGGCACGCTCGTAATGTCAGTGGCGTTCCGGAATGAGGGCTGTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS TCA 90 bp CTCTGCGAGGCCCGCAAGGCTGCACTTGGGAGGGCTTCAGTATGGTaGCCTTTCCTAACTCTGTCGCTTATTTTTCTGGGAAAGAAACAT +
Preference number: 5 (lower is better)
Translates to: LCEARKAALGRASVW*PFLTLSLIFLGKKH
Trigger: ATGTTTCTTTCCCAGAAAAATAAGCGACAGAGTTAGGAAAGGTCACCATACTGAAGCCCTCCCAAGTGCAGCCTTGCGGGCCTCGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS-3UTR CAA 90 bp CTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGTTCCACACTCAAGAAGGCGGTaGCCGGAGTTTTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LQDEAASWESFSSGCCVPHSRRR*PEFSCS
Trigger: GGAGCAGGAAAACTCCGGCAACCGCCTTCTTGAGTG...TGGAACACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CCGTCCTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGAGGTGCAGTTTGTCTTaGTTGGAGTGGAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: PSCKMKLLLGNLLAQDAVRCSLS*LEWSIL
Trigger: CAAGATGCTCCACTCCAACAAAGACAAACTGCACCT...CACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAGGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp AGGGGTGGCGTGGCATGCAGGAGCTGCCCCATGGACATTGCCTTAATGAACGAATGTAACTGTGGTTTATaGCCTTGTCTTTCCAATAAG +
Preference number: 5 (lower is better)
Translates to: RGGVACRSCPMDIALMNECNCGL*PCLSNK
Trigger: CTTATTGGAAAGACAAGGCAATAAACCACAGTTACA...TTCGTTCATTAAGGCAATGTCCATGGGGCAGCTCCTGCATGCCACGCCACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CCATGGGACCCTGGGTTTTGTAACTGTGGTTTATTGCCTTGTCTTTCCAATAAGCTGGGATTAATGAACTaGGCCACTCTTGGGACTCCT +
Preference number: 5 (lower is better)
Translates to: PWDPGFCNCGLLPCLSNKLGLMN*ATLGTP
Trigger: AGGAGTCCCAAGAGTGGCCAAGTTCATTAATCCCAG...CTTATTGGAAAGACAAGGCAATAAACCACAGTTACAAAACCCAGGGTCCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp CTGCAAGATGAAGCTGCTTCTTGGGAATCTTTTAGCTCAGGATGCTGTGTTCCAGAAGAAGGACTCCTCTaGTTTTATGCAACCAACACC +
Preference number: 5 (lower is better)
Translates to: LQDEAASWESFSSGCCVPEEGLL*FYATNT
Trigger: GGTGTTGGTTGCATAAAACAAGAGGAGTCCTTCTTC...TGGAACACAGCATCCTGAGCTAAAAGATTCCCAAGAAGCAGCTTCATCTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS-3UTR CAA 90 bp TTAATAAATAATTTACAGTATGTACACGCGGTGACACTCCACACAGGTCGCAGACTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCAC +
Preference number: 5 (lower is better)
Translates to: LINNLQYVHAVTLHTGRRLQNSE*HLRILH
Trigger: GTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAG...TCTGCGACCTGTGTGGAGTGTCACCGCGTGTACATACTGTAAATTATTTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000554387.5
CDS CCA 72 bp CGCGGGCCAATGGGGGTTCACGGCGGGACAGTCGGGTaGCCGGCTCCGTCCGGGGCTCCGCGAGCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: RGPMGVHGGTVG*PAPSGAPRAGL
Trigger: CAGCCCGGCTCGCGGAGCCCCGGACGGAGCCGGCCACCCGACTGTCCCGCCGTGAACCCCCATTGGCCCGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556950.1
CDS CCA 72 bp CGCCTCCTGCTCCCGGGCTGCATGCCTGCGAGCGCCTaGCGGAGCCGGCCCGGGAGCGAACGGCCAGTGCTT +
Preference number: 6 (lower is better)
Translates to: RLLLPGCMPASA*RSRPGSERPVL
Trigger: AAGCACTGGCCGTTCGCTCCCGGGCCGGCTCCGCCAGGCGCTCGCAGGCATGCAGCCCGGGAGCAGGAGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329082.11
CDS GCA 72 bp CGAGGCAAAGGGCCGCCGGGACGCGAGCCCACGCGGTaGACTGCGCCGACATCCCCGAGGGCAGGAGATGGC +
Preference number: 6 (lower is better)
Translates to: RGKGPPGREPTR*TAPTSPRAGDG
Trigger: GCCATCTCCTGCCCTCGGGGATGTCGGCGCAGTGCACCGCGTGGGCTCGCGTCCCGGCGGCCCTTTGCCTCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543599.5
ENST00000555598.1
ENST00000556950.1
CDS GCA 72 bp CGCGTGGCGCGCAGGGCCGGATGGTTTGGCGCTCTCTaGGAGGCCCGCAAGGCTGCACTTGGGAGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: RVARRAGWFGAL*EARKAALGRAS
Trigger: TGAAGCCCTCCCAAGTGCAGCCTTGCGGGCCTCGCAGAGAGCGCCAAACCATCCGGCCCTGCGCGCCACGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CCA 72 bp TATGCCGGTCCGCGTGGCGCGCAGGGCCGGATGGTTTaGCGCTCTCTGCGAGGCCCGCAAGGCTGCACTTGG +
Preference number: 6 (lower is better)
Translates to: YAGPRGAQGRMV*RSLRGPQGCTW
Trigger: CCAAGTGCAGCCTTGCGGGCCTCGCAGAGAGCGCCAAACCATCCGGCCCTGCGCGCCACGCGGACCGGCATA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CCA 72 bp ATGGCTATGCCGGTCCGCGTGGCGCGCAGGGCCGGATaGTTTGGCGCTCTCTGCGAGGCCCGCAAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: MAMPVRVARRAG*FGALCEARKAA
Trigger: TGCAGCCTTGCGGGCCTCGCAGAGAGCGCCAAACCATCCGGCCCTGCGCGCCACGCGGACCGGCATAGCCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CAA 72 bp CTATGCCGGTCCGCGTGGCGCGCAGGGCCGGATGGTTaGGCGCTCTCTGCGAGGCCCGCAAGGCTGCACTTG +
Preference number: 6 (lower is better)
Translates to: LCRSAWRAGPDG*ALSARPARLHL
Trigger: CAAGTGCAGCCTTGCGGGCCTCGCAGAGAGCGCCAAACCATCCGGCCCTGCGCGCCACGCGGACCGGCATAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CAA 90 bp GAGAGATGGCTATGCCGGTCCGCGTGGCGCGCAGGGCCGGATGGTTaGGCGCTCTCTGCGAGGCCCGCAAGGCTGCACTTGGGAGGGCTT +
Preference number: 6 (lower is better)
Translates to: ERWLCRSAWRAGPDG*ALSARPARLHLGGL
Trigger: AAGCCCTCCCAAGTGCAGCCTTGCGGGCCTCGCAGAGAGCGCCAAACCATCCGGCCCTGCGCGCCACGCGGACCGGCATAGCCATCTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CAA 90 bp GGCTGCGCCCCCGTGCTGAGGGCCTGCGGGCCTAACCTTGCCACCTaGGCACAGCTGCCACTCCAGAGAGATGGCTATGCCGGTCCGCGT +
Preference number: 6 (lower is better)
Translates to: GCAPVLRACGPNLAT*AQLPLQRDGYAGPR
Trigger: ACGCGGACCGGCATAGCCATCTCTCTGGAGTGGCAGCTGTGCCAAGGTGGCAAGGTTAGGCCCGCAGGCCCTCAGCACGGGGGCGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CCA 72 bp GCTGCCACTCCAGAGAGATGGCTATGCCGGTCCGCGTaGCGCGCAGGGCCGGATGGTTTGGCGCTCTCTGCG +
Preference number: 6 (lower is better)
Translates to: AATPERWLCRSA*RAGPDGLALSA
Trigger: CGCAGAGAGCGCCAAACCATCCGGCCCTGCGCGCCACGCGGACCGGCATAGCCATCTCTCTGGAGTGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS TCA 72 bp CTCTCCCCTGGGTTGAGCTGCGGCGCGAGCCGGCGCTaGATCGTCGCCGTGCCCTCCCGTCCACTTAGGAAA +
Preference number: 6 (lower is better)
Translates to: LSPGLSCGASRR*IVAVPSRPLRK
Trigger: TTTCCTAAGTGGACGGGAGGGCACGGCGACGATTCAGCGCCGGCTCGCGCCGCAGCTCAACCCAGGGGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543599.5
ENST00000555598.1
CDS GCA 72 bp CAAGCACCTCGCTGCTTCCTGAAGACTTGCCCCGGCTaGGCCCCCGTGCTGAGGGCCTGCGGGCCTAACCTT +
Preference number: 6 (lower is better)
Translates to: QAPRCFLKTCPG*APVLRACGPNL
Trigger: AAGGTTAGGCCCGCAGGCCCTCAGCACGGGGGCGCAGCCGGGGCAAGTCTTCAGGAAGCAGCGAGGTGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CCA 72 bp CCAGACTGCCGACCCCAAGCTTCCACCGACGCCCCCTaGCTCATCAGTCGCACTCAGACGCGACACCGGTGC +
Preference number: 6 (lower is better)
Translates to: PDCRPQASTDAP*LISRTQTRHRC
Trigger: GCACCGGTGTCGCGTCTGAGTGCGACTGATGAGCCAGGGGGCGTCGGTGGAAGCTTGGGGTCGGCAGTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425933.6
CDS CCA 72 bp CCTTGCCACCTTGGCACAGCTGCCACTCCAGAGAGATaGCTATGCCGGTCCGCGTGGCGCGCAGGGCCGGAT +
Preference number: 6 (lower is better)
Translates to: PCHLGTAATPER*LCRSAWRAGPD
Trigger: ATCCGGCCCTGCGCGCCACGCGGACCGGCATAGCCATCTCTCTGGAGTGGCAGCTGTGCCAAGGTGGCAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CAA 90 bp GGGGCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTaGAGGATCTTGCACGGGGAGGTGGCTCCCTGCTGTTGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: GAWLPDVALQNSELH*RILHGEVAPCCCCP
Trigger: GGGGCAGCAACAGCAGGGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556658.1
CDS GCA 72 bp CACCTTGGCACAGCTGCCACTCCAGAGAGATGGCTATaGCGGTCCGCGTGGCGCGCAGGGCCGGATGGTTTG +
Preference number: 6 (lower is better)
Translates to: HLGTAATPERWL*RSAWRAGPDGL
Trigger: CAAACCATCCGGCCCTGCGCGCCACGCGGACCGGCATAGCCATCTCTCTGGAGTGGCAGCTGTGCCAAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CAA 90 bp GAGGCTGGGGCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCACGGGGAGGTGGCTCCCTGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: EAGAWLPDVALQNSE*HLRILHGEVAPCCC
Trigger: GCAACAGCAGGGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGCCCCAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556658.1
CDS CCA 72 bp GTGCCCTCCCGTCCACTTAGGAAAGCCGGGGCGGCTTaGCAATGGGCATCCTCGGCCCTCAATCCAAGGTCC +
Preference number: 6 (lower is better)
Translates to: VPSRPLRKAGAA*QWASSALNPRS
Trigger: GGACCTTGGATTGAGGGCCGAGGATGCCCATTGCCAAGCCGCCCCGGCTTTCCTAAGTGGACGGGAGGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543599.5
ENST00000555598.1
CDS CAA 72 bp GCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCACGGGGAGGTGGCTGCG +
Preference number: 6 (lower is better)
Translates to: AWLPDVALQNSE*HLRILHGEVAA
Trigger: CGCAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000555598.1
ENST00000557301.2
CDS CAA 72 bp CCCGTGCTGAGGGCCTGCGGGCCTAACCTTGCCACCTaGGCACAGCTGCCACTCCAGAGAGATGGCTATGCC +
Preference number: 6 (lower is better)
Translates to: PVLRACGPNLAT*AQLPLQRDGYA
Trigger: GGCATAGCCATCTCTCTGGAGTGGCAGCTGTGCCAAGGTGGCAAGGTTAGGCCCGCAGGCCCTCAGCACGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CAA 72 bp GCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCACGGGGAGGTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: AWLPDVALQNSE*HLRILHGEVAP
Trigger: GGGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556658.1
CDS TCA 72 bp TGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTTaGGGATCTTGCACGGGGAGGTGGCTGCGGGGAAGC +
Preference number: 6 (lower is better)
Translates to: CPTWRSRTQSCT*GSCTGRWLRGS
Trigger: GCTTCCCCGCAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000555598.1
ENST00000557301.2
CDS GCA 72 bp GGCCTGTTACCACTAGCCTCTCCTTTCCAACCAGACTaGCGACCCCAAGCTTCCACCGACGCCCCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: GLLPLASPFQPD*RPQASTDAPWL
Trigger: GAGCCAGGGGGCGTCGGTGGAAGCTTGGGGTCGGCAGTCTGGTTGGAAAGGAGAGGCTAGTGGTAACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425933.6
CDS CCA 72 bp TCCCGTCCACTTAGGAAAGCCGGGGCGGCTTGGCAATaGGCATCCTCGGCCCTCAATCCAAGGTCCGCACCT +
Preference number: 6 (lower is better)
Translates to: SRPLRKAGAAWQ*ASSALNPRSAP
Trigger: AGGTGCGGACCTTGGATTGAGGGCCGAGGATGCCCATTGCCAAGCCGCCCCGGCTTTCCTAAGTGGACGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543599.5
ENST00000555598.1
CDS CAA 72 bp CTGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTaGAGGATCTTGCACGGGGAGGTGGCTGCGGGGAAG +
Preference number: 6 (lower is better)
Translates to: LPDVALQNSELH*RILHGEVAAGK
Trigger: CTTCCCCGCAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329082.11
ENST00000425933.6
ENST00000542321.6
ENST00000543599.5
ENST00000555598.1
ENST00000557301.2
CDS CAA 72 bp GCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCACGGGGAGGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: AWLPDVALQNSE*HLRILHGEVAA
Trigger: TGCTGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555584.1
CDS CAA 72 bp GCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCACGGGGAGGTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: AWLPDVALQNSE*HLRILHGEVAL
Trigger: GAGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650169.1
CDS CAA 90 bp GGGGCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTaGAGGATCTTGCACGGGGAGGTGGCTCTCGGATTTCCACACGCT +
Preference number: 6 (lower is better)
Translates to: GAWLPDVALQNSELH*RILHGEVALGFPHA
Trigger: AGCGTGTGGAAATCCGAGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650169.1
CDS CAA 90 bp GAGGCTGGGGCGTGGCTGCCCGACGTGGCGCTCCAGAACTCAGAGTaGCACTTGAGGATCTTGCACGGGGAGGTGGCTCTCGGATTTCCA +
Preference number: 6 (lower is better)
Translates to: EAGAWLPDVALQNSE*HLRILHGEVALGFP
Trigger: TGGAAATCCGAGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAGCCACGCCCCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650169.1
CDS CAA 72 bp GTGGCGCTCCAGAACTCAGAGTTGCACTTGAGGATCTaGCACGGGGAGGTGGCTCCCTGCTGTTGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: VALQNSELHLRI*HGEVAPCCCCP
Trigger: GGGGCAGCAACAGCAGGGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556658.1
CDS CAA 72 bp CTGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTaGAGGATCTTGCACGGGGAGGTGGCTCCCTGCTGT +
Preference number: 6 (lower is better)
Translates to: LPDVALQNSELH*RILHGEVAPCC
Trigger: ACAGCAGGGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556658.1
CDS TCA 72 bp TGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTTaGGGATCTTGCACGGGGAGGTGGCTCCCTGCTGTT +
Preference number: 6 (lower is better)
Translates to: CPTWRSRTQSCT*GSCTGRWLPAV
Trigger: AACAGCAGGGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556658.1
CDS GCA 72 bp CGGATGGTTTGGCGCTCTCTGCGAGGCCCGCAAGGCTaGACTTGGGAGGGCTTCAGTATGGTGACCTTTCCT +
Preference number: 6 (lower is better)
Translates to: RMVWRSLRGPQG*TWEGFSMVTFP
Trigger: AGGAAAGGTCACCATACTGAAGCCCTCCCAAGTGCAGCCTTGCGGGCCTCGCAGAGAGCGCCAAACCATCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CAA 72 bp GTGGCGCTCCAGAACTCAGAGTTGCACTTGAGGATCTaGCACGGGGAGGTGGCAGCAGCAGCGGCCCTTCTT +
Preference number: 6 (lower is better)
Translates to: VALQNSELHLRI*HGEVAAAAALL
Trigger: AAGAAGGGCCGCTGCTGCTGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555584.1
CDS TCA 72 bp TGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTTaGGGATCTTGCACGGGGAGGTGGCTCTCGGATTTC +
Preference number: 6 (lower is better)
Translates to: CPTWRSRTQSCT*GSCTGRWLSDF
Trigger: GAAATCCGAGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650169.1
CDS CAA 72 bp CTGCCCGACGTGGCGCTCCAGAACTCAGAGTTGCACTaGAGGATCTTGCACGGGGAGGTGGCTCTCGGATTT +
Preference number: 6 (lower is better)
Translates to: LPDVALQNSELH*RILHGEVALGF
Trigger: AAATCCGAGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650169.1
CDS CAA 72 bp GTGGCGCTCCAGAACTCAGAGTTGCACTTGAGGATCTaGCACGGGGAGGTGGCTCTCGGATTTCCACACGCT +
Preference number: 6 (lower is better)
Translates to: VALQNSELHLRI*HGEVALGFPHA
Trigger: AGCGTGTGGAAATCCGAGAGCCACCTCCCCGTGCAAGATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650169.1
CDS GCA 72 bp GGATTTCCACACGCTCCATACCGGGCAACACGAAGGTaGTGCGGGGCCACAAAGACGAACGAAGACAAGAGT +
Preference number: 6 (lower is better)
Translates to: GFPHAPYRATRR*CGATKTNEDKS
Trigger: ACTCTTGTCTTCGTTCGTCTTTGTGGCCCCGCAGCACCTTCGTGTTGCCCGGTATGGAGCGTGTGGAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650169.1
CDS CAA 72 bp ACACCGGTGCAGGAGGCTGAAAAACCCACTTCCGAGTaGTCTAGGTCTGGGCAGGATGGCTCTCTGCATCTC +
Preference number: 6 (lower is better)
Translates to: TPVQEAEKPTSE*SRSGQDGSLHL
Trigger: GAGATGCAGAGAGCCATCCTGCCCAGACCTAGACAACTCGGAAGTGGGTTTTTCAGCCTCCTGCACCGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425933.6
CDS GCA 72 bp TTTCCACACGCTCCATACCGGGCAACACGAAGGTGCTaGGGGGCCACAAAGACGAACGAAGACAAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: FPHAPYRATRRC*GATKTNEDKSS
Trigger: AGAACTCTTGTCTTCGTTCGTCTTTGTGGCCCCGCAGCACCTTCGTGTTGCCCGGTATGGAGCGTGTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650169.1
CDS TCA 72 bp GCCCGCAAGGCTGCACTTGGGAGGGCTTCAGTATGGTaGCCTTTCCTAACTCTGTCGCTTATTTTTCTGGGA +
Preference number: 6 (lower is better)
Translates to: ARKAALGRASVW*PFLTLSLIFLG
Trigger: TCCCAGAAAAATAAGCGACAGAGTTAGGAAAGGTCACCATACTGAAGCCCTCCCAAGTGCAGCCTTGCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557301.2
CDS CCA 72 bp TGCGGAAACATCCCGGGTGGGTTTTGCTTTTCTGATTaGACCCTGGCACACCAGCCTAAGGATTTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: CGNIPGGFCFSD*TLAHQPKDFCF
Trigger: AAAGCAGAAATCCTTAGGCTGGTGTGCCAGGGTCCAATCAGAAAAGCAAAACCCACCCGGGATGTTTCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555584.1