RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RGL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000159496

Ensembl transcript IDs: ENST00000290691.10, ENST00000290691.9, ENST00000401461.5, ENST00000423392.5, ENST00000441897.5, ENST00000452208.1, ENST00000460003.4, ENST00000467354.2, ENST00000612432.4, ENST00000615003.4

Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTaGCAGCCTACGGGTTTTCGGGCTCCAGCTGGCAGGACAGCTTGT +
Preference number: 1 (lower is better)
Translates to: CSGQHPGGFPATAGC*QPTGFRAPAGRTAC
Trigger: ACAAGCTGTCCTGCCAGCTGGAGCCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR TCA 90 bp TTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACTGTCTACGGTCTGGGTaGGGGATGGTGCAGAGCCGG +
Preference number: 2 (lower is better)
Translates to: FWPASRWVPSHCRMLPAYCLRSG*GMVQSR
Trigger: CCGGCTCTGCACCATCCCTCACCCAGACCGTAGACA...GTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR TCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTGTCTACGGTCTGGGTaGGGGATGGTGCAGAGCCGG +
Preference number: 2 (lower is better)
Translates to: GAVGDEDPGQDAAELPASCLRSG*GMVQSR
Trigger: CCGGCTCTGCACCATCCCTCACCCAGACCGTAGACA...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290691.9
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
3UTR-3UTR GCA 90 bp TTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACTCCCCTGTCAGTGCCTaGCCAGCTGGAATCCTGGGT +
Preference number: 2 (lower is better)
Translates to: FWPASRWVPSHCRMLPAYSPVSA*PAGILG
Trigger: ACCCAGGATTCCAGCTGGGCAGGCACTGACAGGGGA...GTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR CCA 90 bp GCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTCTGGTGTCTACGGTCTaGGTGAGGGATGGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: ASIPVGSQPLQDVASLRVLVSTV*VRDGAE
Trigger: CTCTGCACCATCCCTCACCCAGACCGTAGACACCAG...AACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR CCA 90 bp GCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTCTCACAAAAGTCCCATaGCCTGATCCTGGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: ASIPVGSQPLQDVASLRVLTKVP*PDPGQQ
Trigger: CTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAG...AACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR GCA 90 bp GCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTGAACTCGGACCTCCTTaGTCCTCTTGTTGGTGTTGC +
Preference number: 2 (lower is better)
Translates to: ASIPVGSQPLQDVASLRVELGPP*SSCWCC
Trigger: GCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTC...AACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR GCA 90 bp ATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCGGGGCCACTTGGAGCAGCTaGATTTCCTGCAGAACTCGG +
Preference number: 2 (lower is better)
Translates to: IPVGSQPLQDVASLRVFGATWSS*ISCRTR
Trigger: CCGAGTTCTGCAGGAAATGCAGCTGCTCCAAGTGGC...CCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR CCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCCTGGTGTCTACGGTCTaGGTGAGGGATGGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: GAVGDEDPGQDAAELPASLVSTV*VRDGAE
Trigger: CTCTGCACCATCCCTCACCCAGACCGTAGACACCAG...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290691.9
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
3UTR-3UTR CCA 90 bp CTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGAAGCCTGTAATTCATaGCAGCCACTTGGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: LASIPVGSQPLQDVASLREACNS*QPLGAA
Trigger: AGCTGCTCCAAGTGGCTGCCATGAATTACAGGCTTC...CCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR TCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTTGTCTACGGTCTGGGTaGGGGATGGTGCAGAGCCGG +
Preference number: 2 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCCLRSG*GMVQSR
Trigger: CCGGCTCTGCACCATCCCTCACCCAGACCGTAGACA...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290691.9
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
3UTR-3UTR CCA 90 bp ATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCGGGCCTTGCTCCTCTTGTTaGTGTTGCCATCCAGGTCGT +
Preference number: 2 (lower is better)
Translates to: IPVGSQPLQDVASLRVFGPCSSC*CCHPGR
Trigger: ACGACCTGGATGGCAACACCAACAAGAGGAGCAAGG...CCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR GCA 90 bp TTTCCTGCAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTCTGGGTGAGGGATGGTaGAGAGCCGGTGTTCTGGCC +
Preference number: 2 (lower is better)
Translates to: FPAELGPPCSSCWCCHPGLGEGW*RAGVLA
Trigger: GGCCAGAACACCGGCTCTGCACCATCCCTCACCCAG...ACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTGCAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR TCA 90 bp CCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCCTGGACATCATCGTaGAACCCCATCTCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: PASRWVPSHCRMLPAYGFSWTSS*NPISLC
Trigger: ACAAAGAGAGATGGGGTTTCACGATGATGTCCAGGA...AAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR CCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTCTGGTGTCTACGGTCTaGGTGAGGGATGGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCLVSTV*VRDGAE
Trigger: CTCTGCACCATCCCTCACCCAGACCGTAGACACCAG...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290691.9
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
3UTR GCA 72 bp CAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTaGCAGCCTACGGGTTTTCGGGCTCCAGCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: QHPGGFPATAGC*QPTGFRAPAGR
Trigger: CCTGCCAGCTGGAGCCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR CAA 90 bp GCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTGGCCAGCAGGAGCAGTaGGTGATGAGGATCCAGGGC +
Preference number: 3 (lower is better)
Translates to: ASIPVGSQPLQDVASLRVGQQEQ*VMRIQG
Trigger: GCCCTGGATCCTCATCACCAACTGCTCCTGCTGGCC...AACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR GCA 72 bp GTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTaGAGGATGTTGCCAGCCTACGGGTTTTCGGGCTCC +
Preference number: 3 (lower is better)
Translates to: VFWPASRWVPSH*RMLPAYGFSGS
Trigger: GGAGCCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR CAA 90 bp CCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTCCCATGCAACAGGGCTaGATGCTGGCCGTGGAGGCA +
Preference number: 3 (lower is better)
Translates to: PASRWVPSHCRMLPAYGFPMQQG*MLAVEA
Trigger: TGCCTCCACGGCCAGCATCAAGCCCTGTTGCATGGG...AAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR GCA 72 bp GCAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTaGCATCCAGGTCGTCCGGGATGGCCGAATCCAGCC +
Preference number: 3 (lower is better)
Translates to: AELGPPCSSCWC*HPGRPGWPNPA
Trigger: GGCTGGATTCGGCCATCCCGGACGACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR CAA 90 bp CCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCCTTGCTCCTCTTGTaGGTGTTGCCATCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: PASRWVPSHCRMLPAYGFSLLLL*VLPSRS
Trigger: CGACCTGGATGGCAACACCAACAAGAGGAGCAAGGA...AAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR-3UTR CAA 90 bp ATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCGGGACCTCCTTGCTCCTCTaGTTGGTGTTGCCATCCAGG +
Preference number: 3 (lower is better)
Translates to: IPVGSQPLQDVASLRVFGTSLLL*LVLPSR
Trigger: CCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGT...CCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR CCA 72 bp TCCTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGGATaGCCGAATCCAGCCTCTGTAACTCAGTCAGAAAAT +
Preference number: 3 (lower is better)
Translates to: SSCWCCHPGRPG*PNPASVTQSEN
Trigger: ATTTTCTGACTGAGTTACAGAGGCTGGATTCGGCCATCCCGGACGACCTGGATGGCAACACCAACAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp CTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGTGTCCCGGGCCCTCATaGTGTGGTCCCCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LASIPVGSQPLQDVASLRCPGPS*CGPRGR
Trigger: CCTGCCTCGGGGACCACAGCATGAGGGCCCGGGACA...CCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp GCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTAGGGGGCCCTTCCCCTaGTGCTGGTGCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ASIPVGSQPLQDVASLRVRGPFP*CWCWPW
Trigger: CCAGGGCCAGCACCAGCACCAGGGGAAGGGCCCCCT...AACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCAGGTCCGCCAGCAGTaGTGGTGCTGGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQQVRQQ*WCWLQG
Trigger: GCCCTGGAGCCAGCACCACCACTGCTGGCGGACCTG...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR GCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCGGGCCCTTCCCCTGGTaGTGGTGCTGGCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASGPFPW*WCWPWC
Trigger: GCACCAGGGCCAGCACCAGCACCAGGGGAAGGGCCC...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCGTCCGCCAGCAGTGGTaGTGCTGGCTCCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAVRQQW*CWLQGR
Trigger: CCGGCCCTGGAGCCAGCACCACCACTGCTGGCGGAC...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCAGGGGGCCCTTCCCCTaGTGCTGGTGCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPARGPFP*CWCWPW
Trigger: CCAGGGCCAGCACCAGCACCAGGGGAAGGGCCCCCT...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp CTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGCCATGCAACAGGGCTTaGTGCTGGCCGTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LASIPVGSQPLQDVASLRPCNRA*CWPWRH
Trigger: ATGCCTCCACGGCCAGCATCAAGCCCTGTTGCATGG...CCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTGGGCCCTTCCCCTGGTaGTGGTGCTGGCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGGPFPW*WCWPWC
Trigger: GCACCAGGGCCAGCACCAGCACCAGGGGAAGGGCCC...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CCA 90 bp CAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGGTCCGCCAGCAGTGGTaGTGCTGGCTCCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QNSDLLAPLVGVAIQVVRVRQQW*CWLQGR
Trigger: CCGGCCCTGGAGCCAGCACCACCACTGCTGGCGGAC...CCGGACGACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCCAGGTCCGCCAGCAGTaGTGGTGCTGGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASQVRQQ*WCWLQG
Trigger: GCCCTGGAGCCAGCACCACCACTGCTGGCGGACCTG...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGAGGGGGCCCTTCCCCTaGTGCTGGTGCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRRGPFP*CWCWPW
Trigger: CCAGGGCCAGCACCAGCACCAGGGGAAGGGCCCCCT...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp CTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGAAAGCTCCCCGCCACTaGCCCAGATCCACACTCCCT +
Preference number: 4 (lower is better)
Translates to: LASIPVGSQPLQDVASLRKAPRH*PRSTLP
Trigger: AGGGAGTGTGGATCTGGGCCAGTGGCGGGGAGCTTT...CCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp GCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTGCCTCTCCAGATGTCTaGGTGGGCCTGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: ASIPVGSQPLQDVASLRVASPDV*VGLWLL
Trigger: AAGGAGCCACAGGCCCACTCAGACATCTGGAGAGGC...AACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCCCTGATGGGCACAGCTaGGGCCTAGCCTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASPDGHS*GLAWMG
Trigger: GCCCATCCAGGCTAGGCCTCAGCTGTGCCCATCAGG...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401461.5
CDS-3UTR TCA 90 bp GGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTACAGAGAAGCAGCTGTaGGGCCACCATGAGCCACAC +
Preference number: 4 (lower is better)
Translates to: GQHPGGFPATAGCCQPTGTEKQL*GHHEPH
Trigger: GTGTGGCTCATGGTGGCCTCACAGCTGCTTCTCTGT...ACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGTGTCCCGGGCCCTCATaGTGTGGTCCCCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRCPGPS*CGPRGR
Trigger: CCTGCCTCGGGGACCACAGCATGAGGGCCCGGGACA...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp CTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGTGGGTTCCCAGCCACTaGAGGATGTTGCCAGCCTAC +
Preference number: 4 (lower is better)
Translates to: LASIPVGSQPLQDVASLRWVPSH*RMLPAY
Trigger: GTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCA...CCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp GCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTGTGTCACCCAGTCTTaGAGCCGGGCCTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: ASIPVGSQPLQDVASLRVCVTQS*SRASLR
Trigger: TCTCAGGGAGGCCCGGCTGCAAGACTGGGTGACACA...AACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp CTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGCAGGATCATCTGGCTTaGCCTCGTTGGGCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: LASIPVGSQPLQDVASLRQDHLA*PRWAPE
Trigger: TTCCGGAGCCCAACGAGGCCAAGCCAGATGATCCTG...CCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGTCCGCCAGCAGTGGTaGTGCTGGCTCCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSVRQQW*CWLQGR
Trigger: CCGGCCCTGGAGCCAGCACCACCACTGCTGGCGGAC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGCAGGTCCGCCAGCAGTaGTGGTGCTGGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRQVRQQ*WCWLQG
Trigger: GCCCTGGAGCCAGCACCACCACTGCTGGCGGACCTG...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTCTCCAGCACTGTCCCTaGAGGGGGCCCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGLQHCP*RGPFPW
Trigger: CCAGGGGAAGGGCCCCCTCCAGGGACAGTGCTGGAG...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CCA 90 bp CAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGCTCCAGCACTGTCCCTaGAGGGGGCCCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: QNSDLLAPLVGVAIQVVRLQHCP*RGPFPW
Trigger: CCAGGGGAAGGGCCCCCTCCAGGGACAGTGCTGGAG...CCGGACGACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTTGGATCCCCAGGGAGTaGCGGGAGCCACCTGGCACC +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGWIPRE*REPPGT
Trigger: GGTGCCAGGTGGCTCCCGCCACTCCCTGGGGATCCA...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452208.1
CDS-3UTR TCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTGTCTACGGTCTGGGTaGGGGATGGTGCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPACLRSG*GMVQSR
Trigger: CCGGCTCTGCACCATCCCTCACCCAGACCGTAGACA...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR TCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCAAGTGGGGAGGGGCCTaGGGCTGCCCTGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSKWGGA*GCPDGH
Trigger: GTGCCCATCAGGGCAGCCTCAGGCCCCTCCCCACTT...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401461.5
CDS-3UTR TCA 90 bp TTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGCAGCCGGGCCTCCCTaGGACTGTTTCCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: FWPASRWVPSHCRMLPAYAAGPP*DCFLFC
Trigger: ACAGAAGAGGAAACAGTCTCAGGGAGGCCCGGCTGC...GTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCCTGTACAGACCCTCGTaGGCCCTGGCGTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPALYRPS*ALASHR
Trigger: TCTGTGGGACGCCAGGGCGCACGAGGGTCTGTACAG...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGGCCCTTCCCCTGGTaGTGGTGCTGGCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCGPFPW*WCWPWC
Trigger: GCACCAGGGCCAGCACCAGCACCAGGGGAAGGGCCC...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp GGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTGCCACTTGGAGCAGCTaGATTTCCTGCAGAACTCGG +
Preference number: 4 (lower is better)
Translates to: GQHPGGFPATAGCCQPTGATWSS*ISCRTR
Trigger: CCGAGTTCTGCAGGAAATGCAGCTGCTCCAAGTGGC...ACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCCTGGGTGAGGGATGGTaGAGAGCCGGTGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASLGEGW*RAGVLA
Trigger: GGCCAGAACACCGGCTCTGCACCATCCCTCACCCAG...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp CCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCCCCTGTCAGTGCCTaGCCAGCTGGAATCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PASRWVPSHCRMLPAYGFSPVSA*PAGILG
Trigger: ACCCAGGATTCCAGCTGGGCAGGCACTGACAGGGGA...AAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp GGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTGGTGGCACGAACTGTaGGTGCCATGTGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: GQHPGGFPATAGCCQPTGWWHEL*VPCAHS
Trigger: GGAATGAGCACATGGCACCCACAGTTCGTGCCACCA...ACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCTGGTGTCTACGGTCTaGGTGAGGGATGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQLVSTV*VRDGAE
Trigger: CTCTGCACCATCCCTCACCCAGACCGTAGACACCAG...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
CDS-3UTR CCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCTGCCAGGCACTGCCTaGGCTGTGAACCTGACATAC +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQLPGTA*AVNLTY
Trigger: GTATGTCAGGTTCACAGCCCAGGCAGTGCCTGGCAG...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401461.5
CDS-3UTR CCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGACTGGACGTGGTTGGTaGTGTGGTGCACGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQTGRGW*CGARAL
Trigger: AAGGGCACGTGCACCACACCACCAACCACGTCCAGT...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCGTGGCGGGAGCCACCTaGCACCGTGCTCATACCACT +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAVAGAT*HRAHTT
Trigger: AGTGGTATGAGCACGGTGCCAGGTGGCTCCCGCCAC...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452208.1
CDS-3UTR TCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCGCCTCTCCAGATGTCTaGGTGGGCCTGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAASPDV*VGLWLL
Trigger: AAGGAGCCACAGGCCCACTCAGACATCTGGAGAGGC...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGTGTCTACGGTCTGGGTaGGGGATGGTGCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRCLRSG*GMVQSR
Trigger: CCGGCTCTGCACCATCCCTCACCCAGACCGTAGACA...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR TCA 90 bp CTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGGATGGCCGAATCCAGCCTCTGTTGTCTACGGTCTGGGTaGGGGATGGTGCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LLLVLPSRSSGMAESSLCCLRSG*GMVQSR
Trigger: CCGGCTCTGCACCATCCCTCACCCAGACCGTAGACA...ACAGAGGCTGGATTCGGCCATCCCGGACGACCTGGATGGCAACACCAACAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp CTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGCTGACCTATTGGGTTaGTGCACAGAGCAGAGACGA +
Preference number: 4 (lower is better)
Translates to: LASIPVGSQPLQDVASLRADLLG*CTEQRR
Trigger: TCGTCTCTGCTCTGTGCAGCAACCCAATAGGTCAGC...CCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGCTGGGTGAGGGATGGTaGAGAGCCGGTGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRLGEGW*RAGVLA
Trigger: GGCCAGAACACCGGCTCTGCACCATCCCTCACCCAG...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp GGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTGTTGTGTGGAGCTCTaGAAAGAGAGTGCCCGAGAG +
Preference number: 4 (lower is better)
Translates to: GQHPGGFPATAGCCQPTGCCVEL*KESARE
Trigger: CTCTCGGGCACTCTCTTTGCAGAGCTCCACACAACA...ACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp TCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGACAGCTTCTCCCCAGTaGCGGGCTGGAAAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: SGQHPGGFPATAGCCQPTTASPQ*RAGKLA
Trigger: TGCTAACTTTCCAGCCCGGCACTGGGGAGAAGCTGT...CGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTTAAAGCTCCCCGCCTaGCAGGTGTCAGCGACAGGG +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPALKLPA*QVSATG
Trigger: CCCTGTCGCTGACACCTGGCAGGCGGGGAGCTTTAA...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452208.1
CDS-3UTR CCA 90 bp GCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTGTGAACCCCAACCTTTaGAGAACCCCAGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: ASIPVGSQPLQDVASLRVVNPNL*RTPVSL
Trigger: GAGGCTCACTGGGGTTCTCCAAAGGTTGGGGTTCAC...AACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGTCTTCCCAAAGGCCCTaGAGCACAGCACTGTACACC +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQSSQRP*STALYT
Trigger: GGTGTACAGTGCTGTGCTCCAGGGCCTTTGGGAAGA...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGGACCCTCGTGCGCCCTaGCGTCCCACAGACATTCTC +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRDPRAP*RPTDIL
Trigger: GAGAATGTCTGTGGGACGCCAGGGCGCACGAGGGTC...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTCTCCAGCACTGTCCCTaGAGGGGGCCCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCLQHCP*RGPFPW
Trigger: CCAGGGGAAGGGCCCCCTCCAGGGACAGTGCTGGAG...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCGCTCTGCCAGCAGCCTaGGAGGGAAGGTCGTCATGT +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASALPAA*EGRSSC
Trigger: ACATGACGACCTTCCCTCCCAGGCTGCTGGCAGAGC...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCGCTCTGCCAGCAGCCTaGGAGGGAAGGTCGTCATGT +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAALPAA*EGRSSC
Trigger: ACATGACGACCTTCCCTCCCAGGCTGCTGGCAGAGC...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCCCAGGTCGTCCGGGATaGCCGAATCCAGCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASPGRPG*PNPASV
Trigger: TACAGAGGCTGGATTCGGCCATCCCGGACGACCTGG...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCCCAGGTCGTCCGGGATaGCCGAATCCAGCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAPGRPG*PNPASV
Trigger: TACAGAGGCTGGATTCGGCCATCCCGGACGACCTGG...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp GGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTCATGGCAGCCACTTaGAGCAGCTGCATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GQHPGGFPATAGCCQPTGFMAAT*SSCISC
Trigger: GCAGGAAATGCAGCTGCTCCAAGTGGCTGCCATGAA...ACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp TTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACTCCCCAGTGCCGGGCTaGAAAGTTAGCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FWPASRWVPSHCRMLPAYSPVPG*KVSILQ
Trigger: CTGCAGGATGCTAACTTTCCAGCCCGGCACTGGGGA...GTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp TTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGCACCTCTGTGTCTTaGAGGGGGATGGACACTCAC +
Preference number: 4 (lower is better)
Translates to: FWPASRWVPSHCRMLPAYGTSVS*RGMDTH
Trigger: GTGAGTGTCCATCCCCCTCCAAGACACAGAGGTGCC...GTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTCAGCCACCCCGCACTTaGATCCCCAGGGAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCQPPRT*IPREWR
Trigger: CCGCCACTCCCTGGGGATCCAAGTGCGGGGTGGCTG...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452208.1
CDS-3UTR TCA 90 bp GGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTAGTGATACAGGCCATTaGGGCAGAATGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GQHPGGFPATAGCCQPTGSDTGH*GRMLRA
Trigger: AGCTCTCAGCATTCTGCCTCAATGGCCTGTATCACT...ACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCCCGAGGAGAAGTTGTTaGGGCTTAGGCACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAPRRSC*GLGTPW
Trigger: CCAGGGAGTGCCTAAGCCTCAACAACTTCTCCTCGG...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCAGGGCAAGATGCAGCTaGGCTGCCAGCCTCCTAGAT +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASRARCS*AASLLD
Trigger: ATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCT...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR TCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGAAATGGTCTCCCGCCTaGCTCACAAAAGTCCCATGG +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQKWSPA*LTKVPW
Trigger: CCATGGGACTTTTGTGAGTCAGGCGGGAGACCATTT...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
CDS-3UTR TCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTAGTGGCCTGTCTGGCTaGCCCCACAGTGGGACACCC +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCSGLSG*PHSGTP
Trigger: GGGTGTCCCACTGTGGGGTCAGCCAGACAGGCCACT...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401461.5
CDS-3UTR GCA 90 bp GGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTACTCAAGACTGCAGCTaGAGGCAGATTTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GQHPGGFPATAGCCQPTGTQDCS*RQICEQ
Trigger: CTGCTCACAAATCTGCCTGCAGCTGCAGTCTTGAGT...ACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp GGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTATTGTTAATGCGTGTTaGCCAGGACGTGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GQHPGGFPATAGCCQPTGIVNAC*PGRGAG
Trigger: TCCTGCTCCACGTCCTGGGCAACACGCATTAACAAT...ACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp TCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGCAGAGACGATGACGTaGACCGAGGAGAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SGQHPGGFPATAGCCQPTAETMT*TEEKLL
Trigger: CAACAACTTCTCCTCGGTGCACGTCATCGTCTCTGC...CGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCACCACACCCTTCTTCTaGCTCCGCAGCCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASTTPFF*LRSLIW
Trigger: CCAGATGAGGCTGCGGAGGCAGAAGAAGGGTGTGGT...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCGCCACTGCAGGATGTTaGCAGCCTACGGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASATAGC*QPTGFR
Trigger: CCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGC...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTGGGTTCCCAGCCACTaGAGGATGTTGCCAGCCTAC +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASWVPSH*RMLPAY
Trigger: GTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCA...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCCTGGGTGAGGGATGGTaGAGAGCCGGTGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSLGEGW*RAGVLA
Trigger: GGCCAGAACACCGGCTCTGCACCATCCCTCACCCAG...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCCATTTTGGCCTCTTGTaGGACGAGGAGGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAHFGLL*DEEVGS
Trigger: GCTGCCGACCTCCTCGTCGCACAAGAGGCCAAAATG...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR GCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGTGTTGTGTGGAGCTCTaGAAAGAGAGTGCCCGAGAG +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQCCVEL*KESARE
Trigger: CTCTCGGGCACTCTCTTTGCAGAGCTCCACACAACA...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR GCA 90 bp TCGTCCGGGATGGCCGAATCCAGCCTCTGTAACTCAGTCAGAAAATCCCCCAGGCCCGAGAGCTGTGGGTaGCTTCTGGCAAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSGMAESSLCNSVRKSPRPESCG*LLAKGQ
Trigger: CTGGCCCTTTGCCAGAAGGCACCCACAGCTCTCGGG...CCTGGGGGATTTTCTGACTGAGTTACAGAGGCTGGATTCGGCCATCCCGGACGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCAAAGCTCCAGATCTaGGTCCCCTGGTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPASKLQI*VPWSWG
Trigger: ACCCCAGGACCAGGGGACCCAGATCTGGAGCTTTGA...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGACCCTCGTGCGCCCTaGCGTCCCACAGACATTCTC +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSDPRAP*RPTDIL
Trigger: GAGAATGTCTGTGGGACGCCAGGGCGCACGAGGGTC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGCTGGCTTGGCCTCGTTaGGCTCCGGAAGCACCAACT +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRLAWPR*APEAPT
Trigger: AGTTGGTGCTTCCGGAGCCCAACGAGGCCAAGCCAG...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCCAGGATCATCTGGCTTaGCCTCGTTGGGCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAQDHLA*PRWAPE
Trigger: TTCCGGAGCCCAACGAGGCCAAGCCAGATGATCCTG...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCCAGGATCATCTGGCTTaGCCTCGTTGGGCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASQDHLA*PRWAPE
Trigger: TTCCGGAGCCCAACGAGGCCAAGCCAGATGATCCTG...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTGGAGCAGGATCATCTaGCTTGGCCTCGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAWSRII*LGLVGL
Trigger: GAGCCCAACGAGGCCAAGCCAGATGATCCTGCTCCA...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp ATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCGGGGTGTTGCCCAGGACGTaGAGCAGGATCATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: IPVGSQPLQDVASLRVFGVLPRT*SRIIWL
Trigger: AAGCCAGATGATCCTGCTCCACGTCCTGGGCAACAC...CCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCCCCTTCAGATGTCCTTaGCCCCAGATGCAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAPFRCP*PQMQPK
Trigger: CTTGGGCTGCATCTGGGGCCAAGGACATCTGAAGGG...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTGGGGGTTCCTCTCCTaGGTGGCCACCTTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASWGFLS*VATLKL
Trigger: GAGCTTTAAGGTGGCCACCCAGGAGAGGAACCCCCA...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGTTCATGGCAGCCACTTaGAGCAGCTGCATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQFMAAT*SSCISC
Trigger: GCAGGAAATGCAGCTGCTCCAAGTGGCTGCCATGAA...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
CDS-3UTR CCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTTGTCAGTGGCCTGTCTaGCTGACCCCACAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGCQWPV*LTPQWD
Trigger: GTCCCACTGTGGGGTCAGCCAGACAGGCCACTGACA...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401461.5
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCCCAGTGCCGGGCTaGAAAGTTAGCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPASPVPG*KVSILQ
Trigger: CTGCAGGATGCTAACTTTCCAGCCCGGCACTGGGGA...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CCA 90 bp CTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGGATGGCCGAATCCAGCCTCTGTAGTGCCCGAGAGCTGTaGGTGCCTTCTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LLLVLPSRSSGMAESSLCSAREL*VPSGKG
Trigger: CCCTTTGCCAGAAGGCACCCACAGCTCTCGGGCACT...ACAGAGGCTGGATTCGGCCATCCCGGACGACCTGGATGGCAACACCAACAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
3UTR CAA 72 bp TGCAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTaGCCATCCAGGTCGTCCGGGATGGCCGAATCCAGC +
Preference number: 4 (lower is better)
Translates to: CRTRTSLLLLLV*PSRSSGMAESS
Trigger: GCTGGATTCGGCCATCCCGGACGACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGCCGAGGAGAAGTTGTTaGGGCTTAGGCACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRPRRSC*GLGTPW
Trigger: CCAGGGAGTGCCTAAGCCTCAACAACTTCTCCTCGG...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTAGGGCAAGATGCAGCTaGGCTGCCAGCCTCCTAGAT +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGRARCS*AASLLD
Trigger: ATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCT...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
CDS-3UTR GCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTGCGTAAGCCATCAGTaGTGTCCTGGAAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASCVSHQ*CPGRGR
Trigger: TCTGCCCCTTCCAGGACAGCACTGATGGCTTACGCA...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGATTGTTAATGCGTGTTaGCCAGGACGTGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQIVNAC*PGRGAG
Trigger: TCCTGCTCCACGTCCTGGGCAACACGCATTAACAAT...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR GCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCGGCACGAACTGTGGGTaGCATGTGCTCATTCCCCTT +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAGTNCG*HVLIPL
Trigger: AAGGGGAATGAGCACATGGCACCCACAGTTCGTGCC...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp CAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGACCACACCCTTCTTCTaGCTCCGCAGCCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: QNSDLLAPLVGVAIQVVRTTPFF*LRSLIW
Trigger: CCAGATGAGGCTGCGGAGGCAGAAGAAGGGTGTGGT...CCGGACGACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCGCCACTTGGAGCAGCTaGATTTCCTGCAGAACTCGG +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAATWSS*ISCRTR
Trigger: CCGAGTTCTGCAGGAAATGCAGCTGCTCCAAGTGGC...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTGCCACTGCAGGATGTTaGCAGCCTACGGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGATAGC*QPTGFR
Trigger: CCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGC...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
CDS-3UTR GCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGGCCACTGCAGGATGTTaGCAGCCTACGGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRATAGC*QPTGFR
Trigger: CCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGC...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTTGGGTTCCCAGCCACTaGAGGATGTTGCCAGCCTAC +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGWVPSH*RMLPAY
Trigger: GTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCA...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
CDS-3UTR GCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTCTGGGTGAGGGATGGTaGAGAGCCGGTGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCLGEGW*RAGVLA
Trigger: GGCCAGAACACCGGCTCTGCACCATCCCTCACCCAG...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp TCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGTGGTGTGGTGCACGTaGCCTTTGAAGAATATGGAG +
Preference number: 4 (lower is better)
Translates to: SGQHPGGFPATAGCCQPTVVWCT*PLKNME
Trigger: CTCCATATTCTTCAAAGGGCACGTGCACCACACCAC...CGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCCGAGGCTCCGAGAGGTaGATCTTCAAGACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASRGSER*IFKTEP
Trigger: TGGCTCTGTCTTGAAGATGCACCTCTCGGAGCCTCG...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGTGGAGCAGGATCATCTaGCTTGGCCTCGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRWSRII*LGLVGL
Trigger: GAGCCCAACGAGGCCAAGCCAGATGATCCTGCTCCA...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCGTGTTGCCCAGGACGTaGAGCAGGATCATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASVLPRT*SRIIWL
Trigger: AAGCCAGATGATCCTGCTCCACGTCCTGGGCAACAC...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGCTCTGCCAGCAGCCTaGGAGGGAAGGTCGTCATGT +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSALPAA*EGRSSC
Trigger: ACATGACGACCTTCCCTCCCAGGCTGCTGGCAGAGC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTGGTGGCACGAACTGTaGGTGCCATGTGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAWWHEL*VPCAHS
Trigger: GGAATGAGCACATGGCACCCACAGTTCGTGCCACCA...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCTTTCATGCTTTTGCTaGACACTCCTGCCCACGTCT +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQLSCFC*TLLPTS
Trigger: AGACGTGGGCAGGAGTGTCCAGCAAAAGCATGAAAG...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTTGGGGGTTCCTCTCCTaGGTGGCCACCTTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGWGFLS*VATLKL
Trigger: GAGCTTTAAGGTGGCCACCCAGGAGAGGAACCCCCA...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
CDS-3UTR CCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCCCAGGTCGTCCGGGATaGCCGAATCCAGCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSPGRPG*PNPASV
Trigger: TACAGAGGCTGGATTCGGCCATCCCGGACGACCTGG...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGCTGGTGTCTACGGTCTaGGTGAGGGATGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRLVSTV*VRDGAE
Trigger: CTCTGCACCATCCCTCACCCAGACCGTAGACACCAG...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp CAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGCTGGTGTCTACGGTCTaGGTGAGGGATGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QNSDLLAPLVGVAIQVVRLVSTV*VRDGAE
Trigger: CTCTGCACCATCCCTCACCCAGACCGTAGACACCAG...CCGGACGACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCCTCACAAAAGTCCCATaGCCTGATCCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPALTKVP*PDPGQQ
Trigger: CTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAG...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCCTCACAAAAGTCCCATaGCCTGATCCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASLTKVP*PDPGQQ
Trigger: CTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAG...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGACTGGACGTGGTTGGTaGTGTGGTGCACGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRTGRGW*CGARAL
Trigger: AAGGGCACGTGCACCACACCACCAACCACGTCCAGT...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CCA 90 bp ATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCGGGGTAACGTCAGTACTTTaGGAGGCTGAGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: IPVGSQPLQDVASLRVFGVTSVL*EAEVGG
Trigger: TCCACCCACCTCAGCCTCCCAAAGTACTGACGTTAC...CCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp ATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCGGGATTGAGGCAGAATGCTaGGAGCTGCTTCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: IPVGSQPLQDVASLRVFGIEAEC*ELLQVR
Trigger: CCTCACTTGAAGCAGCTCTCAGCATTCTGCCTCAAT...CCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCCTTTATCCGGAAAGATaGCCGTTGCGGGGGCTGATA +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASLYPER*PLRGLI
Trigger: TATCAGCCCCCGCAACGGTCATCTTTCCGGATAAAG...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCCCTAGGACAATTTCCTaGTGGTCCTCCAAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAPRTIS*WSSKPS
Trigger: ACTGGGCTTGGAGGACCATCAGGAAATTGTCCTAGG...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp TCGTCCGGGATGGCCGAATCCAGCCTCTGTAACTCAGTCAGAAAATCCCCCAGGCCGAGGAGAAGTTGTTaGGGCTTAGGCACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSGMAESSLCNSVRKSPRPRRSC*GLGTPW
Trigger: CCAGGGAGTGCCTAAGCCTCAACAACTTCTCCTCGG...CCTGGGGGATTTTCTGACTGAGTTACAGAGGCTGGATTCGGCCATCCCGGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCCACGTCTTGTGTAGCTaGCCTATTGGGTTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAHVLCS*PIGLLH
Trigger: GTGCAGCAACCCAATAGGTCAGCTACACAAGACGTG...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCAGGGCAAGATGCAGCTaGGCTGCCAGCCTCCTAGAT +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSRARCS*AASLLD
Trigger: ATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCT...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR TCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCAAATGGTCTCCCGCCTaGCTCACAAAAGTCCCATGG +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAKWSPA*LTKVPW
Trigger: CCATGGGACTTTTGTGAGTCAGGCGGGAGACCATTT...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR TCA 90 bp GCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTGTCGAGGGTGAGGGTTaGACCAATGTCTATATTCTC +
Preference number: 4 (lower is better)
Translates to: ASIPVGSQPLQDVASLRVVEGEG*TNVYIL
Trigger: GAGAATATAGACATTGGTTCAACCCTCACCCTCGAC...AACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGTCCTGGACATCATCGTaGAACCCCATCTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQSWTSS*NPISLC
Trigger: ACAAAGAGAGATGGGGTTTCACGATGATGTCCAGGA...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp TTTCCTGCAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTCTGTACAGACCCTCGTaGGCCCTGGCGTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: FPAELGPPCSSCWCCHPGLYRPS*ALASHR
Trigger: TCTGTGGGACGCCAGGGCGCACGAGGGTCTGTACAG...ACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTGCAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCGAGCCTGTTGAAGTGTaGGATGGTGGCACGAACTGT +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASEPVEV*DGGTNC
Trigger: ACAGTTCGTGCCACCATCGCACACTTCAACAGGCTC...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCGCTCTTTCATGCTTTTaGTGGACACTCCTGCCCACG +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAALSCF*WTLLPT
Trigger: CGTGGGCAGGAGTGTCCAGCAAAAGCATGAAAGAGC...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCACCACACCCTTCTTCTaGCTCCGCAGCCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSTTPFF*LRSLIW
Trigger: CCAGATGAGGCTGCGGAGGCAGAAGAAGGGTGTGGT...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCGAACTCGGACCTCCTTaGTCCTCTTGTTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASELGPP*SSCWCC
Trigger: GCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTC...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGCCACTGCAGGATGTTaGCAGCCTACGGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSATAGC*QPTGFR
Trigger: CCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGACAGCTTCTCCCCAGTaGCGGGCTGGAAAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRTASPQ*RAGKLA
Trigger: TGCTAACTTTCCAGCCCGGCACTGGGGAGAAGCTGT...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGTGGAGACCCTTCTGTaGCCAATCTCACCGCAGACC +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSVETLL*PISPQT
Trigger: GGTCTGCGGTGAGATTGGGCACAGAAGGGTCTCCAC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGGTGAACCCCAACCTTTaGAGAACCCCAGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRVNPNL*RTPVSL
Trigger: GAGGCTCACTGGGGTTCTCCAAAGGTTGGGGTTCAC...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCTCAAAGCTCCAGATCTaGGTCCCCTGGTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSSKLQI*VPWSWG
Trigger: ACCCCAGGACCAGGGGACCCAGATCTGGAGCTTTGA...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGTCTTCCCAAAGGCCCTaGAGCACAGCACTGTACACC +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRSSQRP*STALYT
Trigger: GGTGTACAGTGCTGTGCTCCAGGGCCTTTGGGAAGA...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp ATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCGGGAGCTCCTCACTGGGTTaGTTCTTTACAGACCCACGA +
Preference number: 4 (lower is better)
Translates to: IPVGSQPLQDVASLRVFGSSSLG*FFTDPR
Trigger: TCGTGGGTCTGTAAAGAACCAACCCAGTGAGGAGCT...CCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp ATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCGGGCTTTCATGCTTTTGCTaGACACTCCTGCCCACGTCT +
Preference number: 4 (lower is better)
Translates to: IPVGSQPLQDVASLRVFGLSCFC*TLLPTS
Trigger: AGACGTGGGCAGGAGTGTCCAGCAAAAGCATGAAAG...CCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCTGGGGGTTCCTCTCCTaGGTGGCCACCTTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSWGFLS*VATLKL
Trigger: GAGCTTTAAGGTGGCCACCCAGGAGAGGAACCCCCA...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTCCAGGTCGTCCGGGATaGCCGAATCCAGCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCPGRPG*PNPASV
Trigger: TACAGAGGCTGGATTCGGCCATCCCGGACGACCTGG...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCCCTTGCTCCTCTTGTTaGTGTTGCCATCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASPCSSC*CCHPGR
Trigger: ACGACCTGGATGGCAACACCAACAAGAGGAGCAAGG...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTTCATGGCAGCCACTTaGAGCAGCTGCATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASFMAAT*SSCISC
Trigger: GCAGGAAATGCAGCTGCTCCAAGTGGCTGCCATGAA...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGCTCACAAAAGTCCCATaGCCTGATCCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRLTKVP*PDPGQQ
Trigger: CTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAG...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGGAAAGACTCTCATTTTaGCCTCTTGTGCGACGAGGA +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQERLSF*PLVRRG
Trigger: TCCTCGTCGCACAAGAGGCCAAAATGAGAGTCTTTC...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTATCCTGGGTCCCCAGTaGTCCCCATGCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCILGPQ*SPCNRA
Trigger: AGCCCTGTTGCATGGGGACCACTGGGGACCCAGGAT...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGGTAGTCCCAGCTGCTTaGGAGGCTGAGGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRVVPAA*EAEEGL
Trigger: AAGTCCTTCCTCAGCCTCCCAAGCAGCTGGGACTAC...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615003.4
CDS-3UTR TCA 90 bp CAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGCCCATGTTTTGTGGGTaGAAAGGCCCTTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: QNSDLLAPLVGVAIQVVRPMFCG*KGPSEP
Trigger: GGGTTCTGAAGGGCCTTTTCACCCACAAAACATGGG...CCGGACGACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGCCCATGTTTTGTGGGTaGAAAGGCCCTTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRPMFCG*KGPSEP
Trigger: GGGTTCTGAAGGGCCTTTTCACCCACAAAACATGGG...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTCTTTATCCGGAAAGATaGCCGTTGCGGGGGCTGATA +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGLYPER*PLRGLI
Trigger: TATCAGCCCCCGCAACGGTCATCTTTCCGGATAAAG...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR TCA 90 bp CAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGCTTTATCCGGAAAGATaGCCGTTGCGGGGGCTGATA +
Preference number: 4 (lower is better)
Translates to: QNSDLLAPLVGVAIQVVRLYPER*PLRGLI
Trigger: TATCAGCCCCCGCAACGGTCATCTTTCCGGATAAAG...CCGGACGACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGCACGTCTTGTGTAGCTaGCCTATTGGGTTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRHVLCS*PIGLLH
Trigger: GTGCAGCAACCCAATAGGTCAGCTACACAAGACGTG...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTAAATGGTCTCCCGCCTaGCTCACAAAAGTCCCATGG +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGKWSPA*LTKVPW
Trigger: CCATGGGACTTTTGTGAGTCAGGCGGGAGACCATTT...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
CDS-3UTR TCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGCAGGCTCCAAACACCTaGCAACCTACCTGCTCCTAT +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRQAPNT*QPTCSY
Trigger: ATAGGAGCAGGTAGGTTGTCAGGTGTTTGGAGCCTG...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401461.5
CDS-3UTR TCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGAGGTCTCCGGCAGATaGCAGCTTGAGGACTTGGGA +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCEVSGR*QLEDLG
Trigger: TCCCAAGTCCTCAAGCTGTCATCTGCCGGAGACCTC...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401461.5
CDS-3UTR TCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGAGGCAGACGTTGCAGTaGACAGAGATGGTGACACTG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRRQTLQ*TEMVTL
Trigger: CAGTGTCACCATCTCTGTTCACTGCAACGTCTGCCT...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615003.4
CDS-3UTR GCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGTCTGTCTACTGTGAGTaGCTGACTCTGAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQSVYCE*LTLSRI
Trigger: GATTCTACTCAGAGTCAGGCACTCACAGTAGACAGA...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCTGCGTAAGCCATCAGTaGTGTCCTGGAAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSCVSHQ*CPGRGR
Trigger: TCTGCCCCTTCCAGGACAGCACTGATGGCTTACGCA...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGGCACGAACTGTGGGTaGCATGTGCTCATTCCCCTT +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSGTNCG*HVLIPL
Trigger: AAGGGGAATGAGCACATGGCACCCACAGTTCGTGCC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp CTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGGATGGCCGAATCCAGCCTCTGTGAGCCTGTTGAAGTGTaGGATGGTGGCACGAACTGT +
Preference number: 4 (lower is better)
Translates to: LLLVLPSRSSGMAESSLCEPVEV*DGGTNC
Trigger: ACAGTTCGTGCCACCATCGCACACTTCAACAGGCTC...ACAGAGGCTGGATTCGGCCATCCCGGACGACCTGGATGGCAACACCAACAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGGCAGAGACGATGACGTaGACCGAGGAGAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRAETMT*TEEKLL
Trigger: CAACAACTTCTCCTCGGTGCACGTCATCGTCTCTGC...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGGCTCTTTCATGCTTTTaGTGGACACTCCTGCCCACG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRALSCF*WTLLPT
Trigger: CGTGGGCAGGAGTGTCCAGCAAAAGCATGAAAGAGC...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp CTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGGATGGCCGAATCCAGCCTCTGTGAACTCGGACCTCCTTaGTCCTCTTGTTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: LLLVLPSRSSGMAESSLCELGPP*SSCWCC
Trigger: GCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTC...ACAGAGGCTGGATTCGGCCATCCCGGACGACCTGGATGGCAACACCAACAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTGAACTCGGACCTCCTTaGTCCTCTTGTTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGELGPP*SSCWCC
Trigger: GCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTC...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
CDS-3UTR GCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTTGGGTTCCCAGCCACTaGAGGATGTTGCCAGCCTAC +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCWVPSH*RMLPAY
Trigger: GTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCA...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTCATTTTGGCCTCTTGTaGGACGAGGAGGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCHFGLL*DEEVGS
Trigger: GCTGCCGACCTCCTCGTCGCACAAGAGGCCAAAATG...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR GCA 90 bp TTTCCTGCAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTGCTCTGCAAAGAGAGTaGCCGAGAGCTGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: FPAELGPPCSSCWCCHPGALQRE*PRAVGA
Trigger: GGCACCCACAGCTCTCGGGCACTCTCTTTGCAGAGC...ACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTGCAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCCGAGGCTCCGAGAGGTaGATCTTCAAGACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSRGSER*IFKTEP
Trigger: TGGCTCTGTCTTGAAGATGCACCTCTCGGAGCCTCG...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCATGGTGACACTGCAGTaGAGCCTCTCTTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAMVTLQ*SLSLSL
Trigger: CAGTGACAAAGAGAGGCTGCACTGCAGTGTCACCAT...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615003.4
CDS-3UTR CCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTTGGAGCAGGATCATCTaGCTTGGCCTCGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCWSRII*LGLVGL
Trigger: GAGCCCAACGAGGCCAAGCCAGATGATCCTGCTCCA...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGCAGGCAGCTCCTCACTaGGTTGGTTCTTTACAGACC +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRQAAPH*VGSLQT
Trigger: GGTCTGTAAAGAACCAACCCAGTGAGGAGCTGCCTG...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp CTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGGATGGCCGAATCCAGCCTCTGTCAGGCAGCTCCTCACTaGGTTGGTTCTTTACAGACC +
Preference number: 4 (lower is better)
Translates to: LLLVLPSRSSGMAESSLCQAAPH*VGSLQT
Trigger: GGTCTGTAAAGAACCAACCCAGTGAGGAGCTGCCTG...ACAGAGGCTGGATTCGGCCATCCCGGACGACCTGGATGGCAACACCAACAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTCCCTTCAGATGTCCTTaGCCCCAGATGCAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCPFRCP*PQMQPK
Trigger: CTTGGGCTGCATCTGGGGCCAAGGACATCTGAAGGG...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCCTTTCATGCTTTTGCTaGACACTCCTGCCCACGTCT +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPALSCFC*TLLPTS
Trigger: AGACGTGGGCAGGAGTGTCCAGCAAAAGCATGAAAG...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTTGGGGGTTCCTCTCCTaGGTGGCCACCTTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCWGFLS*VATLKL
Trigger: GAGCTTTAAGGTGGCCACCCAGGAGAGGAACCCCCA...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTCCTTGCTCCTCTTGTTaGTGTTGCCATCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGPCSSC*CCHPGR
Trigger: ACGACCTGGATGGCAACACCAACAAGAGGAGCAAGG...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGTTCATGGCAGCCACTTaGAGCAGCTGCATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRFMAAT*SSCISC
Trigger: GCAGGAAATGCAGCTGCTCCAAGTGGCTGCCATGAA...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCGAAGCCTGTAATTCATaGCAGCCACTTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASEACNS*QPLGAA
Trigger: AGCTGCTCCAAGTGGCTGCCATGAATTACAGGCTTC...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCGAAGCCTGTAATTCATaGCAGCCACTTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAEACNS*QPLGAA
Trigger: AGCTGCTCCAAGTGGCTGCCATGAATTACAGGCTTC...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGCACCTCTGTGTCTTaGAGGGGGATGGACACTCAC +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCGTSVS*RGMDTH
Trigger: GTGAGTGTCCATCCCCCTCCAAGACACAGAGGTGCC...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGATTGAGGCAGAATGCTaGGAGCTGCTTCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRIEAEC*ELLQVR
Trigger: CCTCACTTGAAGCAGCTCTCAGCATTCTGCCTCAAT...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp TCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGTGTTTTTCCAAACAGTaGGTGATACAGGCCATTGAG +
Preference number: 4 (lower is better)
Translates to: SGQHPGGFPATAGCCQPTCFSKQ*VIQAIE
Trigger: CTCAATGGCCTGTATCACTCACTGTTTGGAAAAACA...CGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGTATGTGTTGAATGAGTaGACCCCAACCTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQYVLNE*TPTFGE
Trigger: TTCTCCAAAGGTTGGGGTTCACTCATTCAACACATA...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp CTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGTTTGAATGTATGTGTTaGATGAGTGAACCCCAACCT +
Preference number: 4 (lower is better)
Translates to: LASIPVGSQPLQDVASLRFECMC*MSEPQP
Trigger: AGGTTGGGGTTCACTCATTCAACACATACATTCAAA...CCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCCCTAGGACAATTTCCTaGTGGTCCTCCAAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSPRTIS*WSSKPS
Trigger: ACTGGGCTTGGAGGACCATCAGGAAATTGTCCTAGG...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCAAATGGTCTCCCGCCTaGCTCACAAAAGTCCCATGG +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSKWSPA*LTKVPW
Trigger: CCATGGGACTTTTGTGAGTCAGGCGGGAGACCATTT...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR TCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGTTGAGGCCAGGAGTTTaGGACGATCCTGGACATCAT +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRLRPGV*DDPGHH
Trigger: ATGATGTCCAGGATCGTCTCAAACTCCTGGCCTCAA...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp TCGTCCGGGATGGCCGAATCCAGCCTCTGTAACTCAGTCAGAAAATCCCCCAGGCACCGTCATCCCTCTTaGTCAGTAGGTCCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSGMAESSLCNSVRKSPRHRHPS*SVGPSS
Trigger: TGAAGAGGGACCTACTGATCAAGAGGGATGACGGTG...CCTGGGGGATTTTCTGACTGAGTTACAGAGGCTGGATTCGGCCATCCCGGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCAGTGAACAGAGATGGTaGCACTGCAGTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSSEQRW*HCSAAS
Trigger: AGAGGCTGCACTGCAGTGTCACCATCTCTGTTCACT...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615003.4
CDS-3UTR GCA 90 bp CTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGTTGTTTATGAAATTATaGCAAGCCCCAAGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: LASIPVGSQPLQDVASLRLFMKL*QAPRRA
Trigger: CGCTCTTCTTGGGGCTTGGCATAATTTCATAAACAA...CCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGATTGTTAATGCGTGTTaGCCAGGACGTGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRIVNAC*PGRGAG
Trigger: TCCTGCTCCACGTCCTGGGCAACACGCATTAACAAT...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGAGCCTGTTGAAGTGTaGGATGGTGGCACGAACTGT +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSEPVEV*DGGTNC
Trigger: ACAGTTCGTGCCACCATCGCACACTTCAACAGGCTC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGCAGAGACGATGACGTaGACCGAGGAGAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSAETMT*TEEKLL
Trigger: CAACAACTTCTCCTCGGTGCACGTCATCGTCTCTGC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGCTGACCTATTGGGTTaGTGCACAGAGCAGAGACGA +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSADLLG*CTEQRR
Trigger: TCGTCTCTGCTCTGTGCAGCAACCCAATAGGTCAGC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGCTCTTTCATGCTTTTaGTGGACACTCCTGCCCACG +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSALSCF*WTLLPT
Trigger: CGTGGGCAGGAGTGTCCAGCAAAAGCATGAAAGAGC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGCCACTTGGAGCAGCTaGATTTCCTGCAGAACTCGG +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCATWSS*ISCRTR
Trigger: CCGAGTTCTGCAGGAAATGCAGCTGCTCCAAGTGGC...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR GCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGGTGGTGTGGTGCACGTaGCCTTTGAAGAATATGGAG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRVVWCT*PLKNME
Trigger: CTCCATATTCTTCAAAGGGCACGTGCACCACACCAC...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGTGTTGCCCAGGACGTaGAGCAGGATCATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCVLPRT*SRIIWL
Trigger: AAGCCAGATGATCCTGCTCCACGTCCTGGGCAACAC...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTAGCTCCTCACTGGGTTaGTTCTTTACAGACCCACGA +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGSSSLG*FFTDPR
Trigger: TCGTGGGTCTGTAAAGAACCAACCCAGTGAGGAGCT...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCCAGGCAGCTCCTCACTaGGTTGGTTCTTTACAGACC +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSQAAPH*VGSLQT
Trigger: GGTCTGTAAAGAACCAACCCAGTGAGGAGCTGCCTG...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTTGGTGGCACGAACTGTaGGTGCCATGTGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCWWHEL*VPCAHS
Trigger: GGAATGAGCACATGGCACCCACAGTTCGTGCCACCA...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCCCTTGCTCCTCTTGTTaGTGTTGCCATCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSPCSSC*CCHPGR
Trigger: ACGACCTGGATGGCAACACCAACAAGAGGAGCAAGG...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTCTCACAAAAGTCCCATaGCCTGATCCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCLTKVP*PDPGQQ
Trigger: CTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAG...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR TCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCAGTGATACAGGCCATTaGGGCAGAATGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSSDTGH*GRMLRA
Trigger: AGCTCTCAGCATTCTGCCTCAATGGCCTGTATCACT...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTCCTAGGACAATTTCCTaGTGGTCCTCCAAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCPRTIS*WSSKPS
Trigger: ACTGGGCTTGGAGGACCATCAGGAAATTGTCCTAGG...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTGTCGAGGGTGAGGGTTaGACCAATGTCTATATTCTC +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGVEGEG*TNVYIL
Trigger: GAGAATATAGACATTGGTTCAACCCTCACCCTCGAC...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR TCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTCTTGGGATTCAGATCTaGGCAGACAAACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGLGIQI*ADKLCP
Trigger: AGGACACAGTTTGTCTGCTCAGATCTGAATCCCAAG...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401461.5
CDS-3UTR GCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGGACATCCTTTACCAGTaGCATCGCAGACTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRDILYQ*HRRLGF
Trigger: GAAACCAAGTCTGCGATGGCACTGGTAAAGGATGTC...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGACAGAACTCACTATTTaGCTCTTGTGGGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRTELTI*LLWGKS
Trigger: GGACTTCCCCCACAAGAGGCAAATAGTGAGTTCTGT...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp TCGTCCGGGATGGCCGAATCCAGCCTCTGTAACTCAGTCAGAAAATCCCCCAGGACTGTGGGTGCCATGTaGTCATTCCCCTTCAGATGT +
Preference number: 4 (lower is better)
Translates to: SSGMAESSLCNSVRKSPRTVGAM*SFPFRC
Trigger: ACATCTGAAGGGGAATGAGCACATGGCACCCACAGT...CCTGGGGGATTTTCTGACTGAGTTACAGAGGCTGGATTCGGCCATCCCGGACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCACTGTGGGTGCCATGTaGTCATTCCCCTTCAGATGT +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSTVGAM*SFPFRC
Trigger: ACATCTGAAGGGGAATGAGCACATGGCACCCACAGT...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp ATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCGGGCTTTTAGCTCTTTCATaGTTTTGCTGGACACTCCTG +
Preference number: 4 (lower is better)
Translates to: IPVGSQPLQDVASLRVFGLLALS*FCWTLL
Trigger: CAGGAGTGTCCAGCAAAAGCATGAAAGAGCTAAAAG...CCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCAGCTCCTCACTGGGTTaGTTCTTTACAGACCCACGA +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSSSSLG*FFTDPR
Trigger: TCGTGGGTCTGTAAAGAACCAACCCAGTGAGGAGCT...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGAAGCCTGTAATTCATaGCAGCCACTTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSEACNS*QPLGAA
Trigger: AGCTGCTCCAAGTGGCTGCCATGAATTACAGGCTTC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CCA 90 bp CAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGGAAAGACTCTCATTTTaGCCTCTTGTGCGACGAGGA +
Preference number: 4 (lower is better)
Translates to: QNSDLLAPLVGVAIQVVRERLSF*PLVRRG
Trigger: TCCTCGTCGCACAAGAGGCCAAAATGAGAGTCTTTC...CCGGACGACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CCA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTTTCCCCAACAGGATTTaGCACATAGGAGCATCTGCA +
Preference number: 4 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGFPNRI*HIGASA
Trigger: TGCAGATGCTCCTATGTGCCAAATCCTGTTGGGGAA...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401461.5
CDS-3UTR TCA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCAATGTATGTGTTGAATaGGTGAACCCCAACCTTTGG +
Preference number: 4 (lower is better)
Translates to: AGAVGDEDPGQDAAELPANVCVE*VNPNLW
Trigger: CCAAAGGTTGGGGTTCACTCATTCAACACATACATT...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGACATCCTTTACCAGTaGCATCGCAGACTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSDILYQ*HRRLGF
Trigger: GAAACCAAGTCTGCGATGGCACTGGTAAAGGATGTC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTACTCAAGACTGCAGCTaGAGGCAGATTTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCTQDCS*RQICEQ
Trigger: CTGCTCACAAATCTGCCTGCAGCTGCAGTCTTGAGT...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTACTGTGGGTGCCATGTaGTCATTCCCCTTCAGATGT +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCTVGAM*SFPFRC
Trigger: ACATCTGAAGGGGAATGAGCACATGGCACCCACAGT...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp TTTCCTGCAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTCCTTGCTCCTCTTGTTaGTGTTGCCATCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: FPAELGPPCSSCWCCHPGPCSSC*CCHPGR
Trigger: ACGACCTGGATGGCAACACCAACAAGAGGAGCAAGG...ACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTGCAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR TCA 90 bp TCGTCCGGGATGGCCGAATCCAGCCTCTGTAACTCAGTCAGAAAATCCCCCAGGCTCTTCTGTAAAGAGTaGTGCAAACCACAGCTACCT +
Preference number: 4 (lower is better)
Translates to: SSGMAESSLCNSVRKSPRLFCKE*CKPQLP
Trigger: AGGTAGCTGTGGTTTGCATCACTCTTTACAGAAGAG...CCTGGGGGATTTTCTGACTGAGTTACAGAGGCTGGATTCGGCCATCCCGGACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCTCTGTCTACTGTGAGTaGCTGACTCTGAGTAGAATC +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSSVYCE*LTLSRI
Trigger: GATTCTACTCAGAGTCAGGCACTCACAGTAGACAGA...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTACAGAACTCACTATTTaGCTCTTGTGGGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCTELTI*LLWGKS
Trigger: GGACTTCCCCCACAAGAGGCAAATAGTGAGTTCTGT...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR GCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGCTTTTAGCTCTTTCATaGTTTTGCTGGACACTCCTG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRLLALS*FCWTLL
Trigger: CAGGAGTGTCCAGCAAAAGCATGAAAGAGCTAAAAG...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGGTGCCATCGCAGACTTaGTTTCTATGTGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRVPSQT*FLCVFP
Trigger: TGGAAAAACACATAGAAACCAAGTCTGCGATGGCAC...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGACAGCTTGAGGACTTaGGATTCAGATCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCDSLRT*DSDLSR
Trigger: TCTGCTCAGATCTGAATCCCAAGTCCTCAAGCTGTC...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401461.5
CDS-3UTR TCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCAATGTATGTGTTGAATaGGTGAACCCCAACCTTTGG +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSNVCVE*VNPNLW
Trigger: CCAAAGGTTGGGGTTCACTCATTCAACACATACATT...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGAGAGCGATGCACAAATaGGGTGTTTTGAATGTATGT +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRRAMHK*GVLNVC
Trigger: ACATACATTCAAAACACCTCATTTGTGCATCGCTCT...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCAGAATATGGAGAAATTaGATCCATCCAACAGCTCTT +
Preference number: 4 (lower is better)
Translates to: GAVGDEDPGQDAAELPASRIWRN*IHPTAL
Trigger: AAGAGCTGTTGGATGGATTCAATTTCTCCATATTCT...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR GCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGTTGTTTATGAAATTATaGCAAGCCCCAAGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRLFMKL*QAPRRA
Trigger: CGCTCTTCTTGGGGCTTGGCATAATTTCATAAACAA...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTTATGTGTTGAATGAGTaGACCCCAACCTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCYVLNE*TPTFGE
Trigger: TTCTCCAAAGGTTGGGGTTCACTCATTCAACACATA...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCTTTGAATGTATGTGTTaGATGAGTGAACCCCAACCT +
Preference number: 4 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSFECMC*MSEPQP
Trigger: AGGTTGGGGTTCACTCATTCAACACATACATTCAAA...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp CTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGGATGGCCGAATCCAGCCTCTGTAGAATATGGAGAAATTaGATCCATCCAACAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLLVLPSRSSGMAESSLCRIWRN*IHPTAL
Trigger: AAGAGCTGTTGGATGGATTCAATTTCTCCATATTCT...ACAGAGGCTGGATTCGGCCATCCCGGACGACCTGGATGGCAACACCAACAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTCTTTTAGCTCTTTCATaGTTTTGCTGGACACTCCTG +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCLLALS*FCWTLL
Trigger: CAGGAGTGTCCAGCAAAAGCATGAAAGAGCTAAAAG...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR TCA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTAGAGCGATGCACAAATaGGGTGTTTTGAATGTATGT +
Preference number: 4 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCRAMHK*GVLNVC
Trigger: ACATACATTCAAAACACCTCATTTGTGCATCGCTCT...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CCA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGTCTCATTTTCATACTTaGTTTTCACAAGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: NGLPPDSQKSHGLILASRSHFHT*FSQVLS
Trigger: AGACAGGACTTGTGAAAACCAAGTATGAAAATGAGA...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR GCA 90 bp TCTTGTGAAATAGGTGACAAATTTCTCAAGAGGCCGAAGCCTGTAATTCATGGCCGGGGGATTGTCATCTaGTTTGTTTATGAAATTATG +
Preference number: 4 (lower is better)
Translates to: SCEIGDKFLKRPKPVIHGRGIVI*FVYEIM
Trigger: CATAATTTCATAAACAAAGCAGATGACAATCCCCCG...GCCATGAATTACAGGCTTCGGCCTCTTGAGAAATTTGTCACCTATTTCACAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCAGCCACCCCGCACTaGGATCCCCAGGGAGTGGCG +
Preference number: 5 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQPATPH*DPQGVA
Trigger: CGCCACTCCCTGGGGATCCAAGTGCGGGGTGGCTGG...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452208.1
CDS-3UTR CAA 90 bp CTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGCAGGATCATCTGGCTaGGCCTCGTTGGGCTCCGGA +
Preference number: 5 (lower is better)
Translates to: LASIPVGSQPLQDVASLRAGSSG*ASLGSG
Trigger: TCCGGAGCCCAACGAGGCCAAGCCAGATGATCCTGC...CCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp TCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGCCCATGCAACAGGGCTaGATGCTGGCCGTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: SGQHPGGFPATAGCCQPTPMQQG*MLAVEA
Trigger: TGCCTCCACGGCCAGCATCAAGCCCTGTTGCATGGG...CGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS GCA 90 bp AGCAGTGGTGGTGCTGGCTCCAGGGCCGGCATTGTTAATGCGTGTTaGCCAGGACGTGGAGCAGGATCATCTGGCTTGGCCTCGTTGGGC +
Preference number: 5 (lower is better)
Translates to: SSGGAGSRAGIVNAC*PGRGAGSSGLASLG
Trigger: GCCCAACGAGGCCAAGCCAGATGATCCTGCTCCACGTCCTGGGCAACACGCATTAACAATGCCGGCCCTGGAGCCAGCACCACCACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290691.10
ENST00000401461.5
ENST00000423392.5
ENST00000441897.5
ENST00000460003.4
ENST00000467354.2
ENST00000612432.4
ENST00000615003.4
CDS-3UTR CAA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTCTGGCTTGGCCTCGTaGGGCTCCGGAAGCACCAAC +
Preference number: 5 (lower is better)
Translates to: GAVGDEDPGQDAAELPASSGLAS*GSGSTN
Trigger: GTTGGTGCTTCCGGAGCCCAACGAGGCCAAGCCAGA...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCGGCCAGCAGGAGCAGTaGGTGATGAGGATCCAGGGC +
Preference number: 5 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAGQQEQ*VMRIQG
Trigger: GCCCTGGATCCTCATCACCAACTGCTCCTGCTGGCC...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CAA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGTCTCATTTTGGCCTCTaGTGCGACGAGGAGGTCGGC +
Preference number: 5 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQSHFGL*CDEEVG
Trigger: GCCGACCTCCTCGTCGCACAAGAGGCCAAAATGAGA...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CAA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGTCTGGCTTGGCCTCGTaGGGCTCCGGAAGCACCAAC +
Preference number: 5 (lower is better)
Translates to: NGLPPDSQKSHGLILASRSGLAS*GSGSTN
Trigger: GTTGGTGCTTCCGGAGCCCAACGAGGCCAAGCCAGA...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp CTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGGATGGCCGAATCCAGCCTCTGTTCTGGCTTGGCCTCGTaGGGCTCCGGAAGCACCAAC +
Preference number: 5 (lower is better)
Translates to: LLLVLPSRSSGMAESSLCSGLAS*GSGSTN
Trigger: GTTGGTGCTTCCGGAGCCCAACGAGGCCAAGCCAGA...ACAGAGGCTGGATTCGGCCATCCCGGACGACCTGGATGGCAACACCAACAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGGCAGGATCATCTGGCTaGGCCTCGTTGGGCTCCGGA +
Preference number: 5 (lower is better)
Translates to: NGLPPDSQKSHGLILASRAGSSG*ASLGSG
Trigger: TCCGGAGCCCAACGAGGCCAAGCCAGATGATCCTGC...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCGCTCCAGGGCCGGCATaGTTAATGCGTGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GAVGDEDPGQDAAELPASAPGPA*LMRVAQ
Trigger: CTGGGCAACACGCATTAACAATGCCGGCCCTGGAGC...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGTGGAGCACCACCTTCTaGAACAGCTCCGCATCCATG +
Preference number: 5 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQWSTTF*NSSASM
Trigger: CATGGATGCGGAGCTGTTCAAGAAGGTGGTGCTCCA...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CAA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCAGTTGGTGAGCCTGTaGAAGTGTGCGATGGTGGCA +
Preference number: 5 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQQLVSL*KCAMVA
Trigger: TGCCACCATCGCACACTTCAACAGGCTCACCAACTG...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CAA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGTCCTTGCTCCTCTTGTaGGTGTTGCCATCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQSLLLL*VLPSRS
Trigger: CGACCTGGATGGCAACACCAACAAGAGGAGCAAGGA...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
CDS-3UTR CAA 90 bp ATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCGGGAGCCACTGCAGGATGTaGCCAGCCTACGGGTTTTCG +
Preference number: 5 (lower is better)
Translates to: IPVGSQPLQDVASLRVFGSHCRM*PAYGFS
Trigger: CGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCT...CCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGGGCCAGCAGGAGCAGTaGGTGATGAGGATCCAGGGC +
Preference number: 5 (lower is better)
Translates to: NGLPPDSQKSHGLILASRGQQEQ*VMRIQG
Trigger: GCCCTGGATCCTCATCACCAACTGCTCCTGCTGGCC...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CAA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGCAGGATCATCTGGCTaGGCCTCGTTGGGCTCCGGA +
Preference number: 5 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSAGSSG*ASLGSG
Trigger: TCCGGAGCCCAACGAGGCCAAGCCAGATGATCCTGC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp TCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGTGTGTAGCTGACCTATaGGGTTGCTGCACAGAGCAG +
Preference number: 5 (lower is better)
Translates to: SGQHPGGFPATAGCCQPTCVADL*GCCTEQ
Trigger: CTGCTCTGTGCAGCAACCCAATAGGTCAGCTACACA...CGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp CGGTGTTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGATTCATGGCAGCCACTaGGAGCAGCTGCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: RCSGQHPGGFPATAGCCQIHGSH*EQLHFL
Trigger: CAGGAAATGCAGCTGCTCCAAGTGGCTGCCATGAAT...CTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAACACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
CDS-3UTR CAA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCAGTGAACCCCAACCTTaGGAGAACCCCAGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: AGAVGDEDPGQDAAELPASEPQP*ENPSEP
Trigger: AGGCTCACTGGGGTTCTCCAAAGGTTGGGGTTCACT...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCGCTCCAGGGCCGGCATaGTTAATGCGTGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSAPGPA*LMRVAQ
Trigger: CTGGGCAACACGCATTAACAATGCCGGCCCTGGAGC...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCCAGCTCCTCACTGGGTaGGTTCTTTACAGACCCACG +
Preference number: 5 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAQLLTG*VLYRPT
Trigger: CGTGGGTCTGTAAAGAACCAACCCAGTGAGGAGCTG...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTGGAGCACCACCTTCTaGAACAGCTCCGCATCCATG +
Preference number: 5 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAWSTTF*NSSASM
Trigger: CATGGATGCGGAGCTGTTCAAGAAGGTGGTGCTCCA...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTGGAGCACCACCTTCTaGAACAGCTCCGCATCCATG +
Preference number: 5 (lower is better)
Translates to: GAVGDEDPGQDAAELPASWSTTF*NSSASM
Trigger: CATGGATGCGGAGCTGTTCAAGAAGGTGGTGCTCCA...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTGCACCGAGGAGAAGTaGTTGAGGCTTAGGCACTCC +
Preference number: 5 (lower is better)
Translates to: AGAVGDEDPGQDAAELPACTEEK*LRLRHS
Trigger: GGAGTGCCTAAGCCTCAACAACTTCTCCTCGGTGCA...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCACCTCCTTGCTCCTCTaGTTGGTGTTGCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: AGAVGDEDPGQDAAELPATSLLL*LVLPSR
Trigger: CCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGT...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CAA 90 bp TTCTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACAGAACTCGGACCTCCTaGCTCCTCTTGTTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: FWPASRWVPSHCRMLPAYRTRTS*LLLLVL
Trigger: CAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCT...GTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp ATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTTCGGGATTCATGGCAGCCACTaGGAGCAGCTGCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: IPVGSQPLQDVASLRVFGIHGSH*EQLHFL
Trigger: CAGGAAATGCAGCTGCTCCAAGTGGCTGCCATGAAT...CCCGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTAGCCACTGCAGGATGTaGCCAGCCTACGGGTTTTCG +
Preference number: 5 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGSHCRM*PAYGFS
Trigger: CGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCT...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
CDS-3UTR CAA 90 bp TTTCCTGCAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTGTGTGTCACCCAGTCTaGCAGCCGGGCCTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: FPAELGPPCSSCWCCHPGVCHPV*QPGLPE
Trigger: CTCAGGGAGGCCCGGCTGCAAGACTGGGTGACACAC...ACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTGCAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGAGGCTGAGGAAGGACTaGAGCCCAGAAGGCAGACGT +
Preference number: 5 (lower is better)
Translates to: NGLPPDSQKSHGLILASRRLRKD*SPEGRR
Trigger: ACGTCTGCCTTCTGGGCTCAAGTCCTTCCTCAGCCT...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615003.4
CDS TCA 90 bp TTTCCTGATGGTCCTCCAAGCCCAGTCCAGGCCAGGAGAGGTTCCTaGAGGCCAGCTTTATCCGGAAAGATGACCGTTGCGGGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: FPDGPPSPVQARRGS*RPALSGKMTVAGAD
Trigger: ATCAGCCCCCGCAACGGTCATCTTTCCGGATAAAGCTGGCCTTCAGGAACCTCTCCTGGCCTGGACTGGGCTTGGAGGACCATCAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000290691.10
ENST00000401461.5
ENST00000423392.5
ENST00000441897.5
ENST00000460003.4
ENST00000467354.2
ENST00000612432.4
ENST00000615003.4
CDS GCA 90 bp AGCCTGTTGAAGTGTGCGATGGTGGCACGAACTGTGGGTGCCATGTaGTCATTCCCCTTCAGATGTCCTTGGCCCCAGATGCAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: SLLKCAMVARTVGAM*SFPFRCPWPQMQPK
Trigger: CTTGGGCTGCATCTGGGGCCAAGGACATCTGAAGGGGAATGAGCACATGGCACCCACAGTTCGTGCCACCATCGCACACTTCAACAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000290691.10
ENST00000401461.5
ENST00000423392.5
ENST00000441897.5
ENST00000460003.4
ENST00000467354.2
ENST00000612432.4
ENST00000615003.4
CDS-3UTR CAA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCCTCACTATTTGCCTCTaGTGGGGGAAGTCCCCAGAT +
Preference number: 5 (lower is better)
Translates to: AGAVGDEDPGQDAAELPALTICL*WGKSPD
Trigger: ATCTGGGGACTTCCCCCACAAGAGGCAAATAGTGAG...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCCTCACTATTTGCCTCTaGTGGGGGAAGTCCCCAGAT +
Preference number: 5 (lower is better)
Translates to: GAVGDEDPGQDAAELPASLTICL*WGKSPD
Trigger: ATCTGGGGACTTCCCCCACAAGAGGCAAATAGTGAG...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp GCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGGTTTACAGAACTCACTATTaGCCTCTTGTGGGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: ASIPVGSQPLQDVASLRVYRTHY*PLVGEV
Trigger: GACTTCCCCCACAAGAGGCAAATAGTGAGTTCTGTA...AACCCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGCTCCAGGGCCGGCATaGTTAATGCGTGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCAPGPA*LMRVAQ
Trigger: CTGGGCAACACGCATTAACAATGCCGGCCCTGGAGC...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp CAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGCAGTTGGTGAGCCTGTaGAAGTGTGCGATGGTGGCA +
Preference number: 5 (lower is better)
Translates to: QNSDLLAPLVGVAIQVVRQLVSL*KCAMVA
Trigger: TGCCACCATCGCACACTTCAACAGGCTCACCAACTG...CCGGACGACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCGAGGTGGTGATGCAGTaGGTGAGCCTGTTGAAGTGT +
Preference number: 5 (lower is better)
Translates to: GAVGDEDPGQDAAELPASEVVMQ*VSLLKC
Trigger: ACACTTCAACAGGCTCACCAACTGCATCACCACCTC...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTACCGAGGAGAAGTTGTaGAGGCTTAGGCACTCCCTG +
Preference number: 5 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGTEEKL*RLRHSL
Trigger: CAGGGAGTGCCTAAGCCTCAACAACTTCTCCTCGGT...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CAA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGTGCACCGAGGAGAAGTaGTTGAGGCTTAGGCACTCC +
Preference number: 5 (lower is better)
Translates to: NGLPPDSQKSHGLILASRCTEEK*LRLRHS
Trigger: GGAGTGCCTAAGCCTCAACAACTTCTCCTCGGTGCA...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGTCCTTGCTCCTCTTGTaGGTGTTGCCATCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: NGLPPDSQKSHGLILASRSLLLL*VLPSRS
Trigger: CGACCTGGATGGCAACACCAACAAGAGGAGCAAGGA...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CAA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCAGAACTCGGACCTCCTaGCTCCTCTTGTTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: AGAVGDEDPGQDAAELPARTRTS*LLLLVL
Trigger: CAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCT...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CAA 90 bp TTTCCTGCAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTGGCCAGCAGGAGCAGTaGGTGATGAGGATCCAGGGC +
Preference number: 5 (lower is better)
Translates to: FPAELGPPCSSCWCCHPGGQQEQ*VMRIQG
Trigger: GCCCTGGATCCTCATCACCAACTGCTCCTGCTGGCC...ACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTGCAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCCAGCAGGAGAACATGTaGTTCTCTCGAGCATCGCCT +
Preference number: 5 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAQQENM*FSRASP
Trigger: AGGCGATGCTCGAGAGAACAACATGTTCTCCTGCTG...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CAA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCGGAAAGACTCTCATTTaGGCCTCTTGTGCGACGAGG +
Preference number: 5 (lower is better)
Translates to: GAVGDEDPGQDAAELPASGKTLI*ASCATR
Trigger: CCTCGTCGCACAAGAGGCCAAAATGAGAGTCTTTCC...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CAA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCGGAAAGACTCTCATTTaGGCCTCTTGTGCGACGAGG +
Preference number: 5 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAGKTLI*ASCATR
Trigger: CCTCGTCGCACAAGAGGCCAAAATGAGAGTCTTTCC...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CAA 90 bp CTGGCCAGCATCCCGGTGGGTTCCCAGCCACTGCAGGATGTTGCCAGCCTACGGTGGTGCACGTGCCCTTaGAAGAATATGGAGAAATTG +
Preference number: 5 (lower is better)
Translates to: LASIPVGSQPLQDVASLRWCTCP*KNMEKL
Trigger: CAATTTCTCCATATTCTTCAAAGGGCACGTGCACCA...CCGTAGGCTGGCAACATCCTGCAGTGGCTGGGAACCCACCGGGATGCTGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCCAGCTCCTCACTGGGTaGGTTCTTTACAGACCCACG +
Preference number: 5 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSQLLTG*VLYRPT
Trigger: CGTGGGTCTGTAAAGAACCAACCCAGTGAGGAGCTG...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCCAGTTGGTGAGCCTGTaGAAGTGTGCGATGGTGGCA +
Preference number: 5 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSQLVSL*KCAMVA
Trigger: TGCCACCATCGCACACTTCAACAGGCTCACCAACTG...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCACCGAGGAGAAGTTGTaGAGGCTTAGGCACTCCCTG +
Preference number: 5 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSTEEKL*RLRHSL
Trigger: CAGGGAGTGCCTAAGCCTCAACAACTTCTCCTCGGT...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCTGCACCGAGGAGAAGTaGTTGAGGCTTAGGCACTCC +
Preference number: 5 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSCTEEK*LRLRHS
Trigger: GGAGTGCCTAAGCCTCAACAACTTCTCCTCGGTGCA...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCTCCTTGCTCCTCTTGTaGGTGTTGCCATCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSSLLLL*VLPSRS
Trigger: CGACCTGGATGGCAACACCAACAAGAGGAGCAAGGA...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CAA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCACCTCCTTGCTCCTCTaGTTGGTGTTGCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSTSLLL*LVLPSR
Trigger: CCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGT...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CAA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGAGAACTCGGACCTCCTaGCTCCTCTTGTTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: NGLPPDSQKSHGLILASRRTRTS*LLLLVL
Trigger: CAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCT...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CAA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGATTCATGGCAGCCACTaGGAGCAGCTGCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: NGLPPDSQKSHGLILASRIHGSH*EQLHFL
Trigger: CAGGAAATGCAGCTGCTCCAAGTGGCTGCCATGAAT...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CAA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTAGCCACTGCAGGATGTaGCCAGCCTACGGGTTTTCG +
Preference number: 5 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCSHCRM*PAYGFS
Trigger: CGAAAACCCGTAGGCTGGCAACATCCTGCAGTGGCT...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CAA 90 bp CAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGTCACCGTCATCCCTCTaGATCAGTAGGTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: QNSDLLAPLVGVAIQVVRSPSSL*ISRSLF
Trigger: GAAGAGGGACCTACTGATCAAGAGGGATGACGGTGA...CCGGACGACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS CCA 90 bp GGACAGCTTGTAGCAGAACAACAACAGCAGAACAACCGGACATGGTaGTGTACAGCGGTAGTCCCAGCTGCTTGGGAGGCTGAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: GQLVAEQQQQNNRTW*CTAVVPAAWEAEEG
Trigger: TCCTTCCTCAGCCTCCCAAGCAGCTGGGACTACCGCTGTACACCACCATGTCCGGTTGTTCTGCTGTTGTTGTTCTGCTACAAGCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467354.2
ENST00000615003.4
CDS CCA 90 bp GCAGGACAGCTTGTAGCAGAACAACAACAGCAGAACAACCGGACATaGTGGTGTACAGCGGTAGTCCCAGCTGCTTGGGAGGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: AGQLVAEQQQQNNRT*WCTAVVPAAWEAEE
Trigger: TTCCTCAGCCTCCCAAGCAGCTGGGACTACCGCTGTACACCACCATGTCCGGTTGTTCTGCTGTTGTTGTTCTGCTACAAGCTGTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467354.2
ENST00000615003.4
CDS-3UTR CAA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTACCGAGGAGAAGTTGTaGAGGCTTAGGCACTCCCTG +
Preference number: 5 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCTEEKL*RLRHSL
Trigger: CAGGGAGTGCCTAAGCCTCAACAACTTCTCCTCGGT...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCTGTGTAGCTGACCTATaGGGTTGCTGCACAGAGCAG +
Preference number: 5 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSCVADL*GCCTEQ
Trigger: CTGCTCTGTGCAGCAACCCAATAGGTCAGCTACACA...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCTTAAAGCTCCCCGCCTaGATCAGTAGGTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSLKLPA*ISRSLF
Trigger: GAAGAGGGACCTACTGATCAAGGCGGGGAGCTTTAA...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000615003.4
CDS-3UTR CAA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTACCTCCTTGCTCCTCTaGTTGGTGTTGCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCTSLLL*LVLPSR
Trigger: CCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGT...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000452208.1
ENST00000615003.4
CDS-3UTR CAA 90 bp TTTCCTGCAGAACTCGGACCTCCTTGCTCCTCTTGTTGGTGTTGCCATCCAGGTTCTCATTTTGGCCTCTaGTGCGACGAGGAGGTCGGC +
Preference number: 5 (lower is better)
Translates to: FPAELGPPCSSCWCCHPGSHFGL*CDEEVG
Trigger: GCCGACCTCCTCGTCGCACAAGAGGCCAAAATGAGA...ACCTGGATGGCAACACCAACAAGAGGAGCAAGGAGGTCCGAGTTCTGCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCCTGTGTCTTAGATCATaGAGTCCCTACAAGAACCCT +
Preference number: 5 (lower is better)
Translates to: GAVGDEDPGQDAAELPASLCLRS*SPYKNP
Trigger: AGGGTTCTTGTAGGGACTCAATGATCTAAGACACAG...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCAGTGCCATCGCAGACTaGGTTTCTATGTGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: GAVGDEDPGQDAAELPASSAIAD*VSMCFS
Trigger: GGAAAAACACATAGAAACCAAGTCTGCGATGGCACT...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGTACAGAACTCACTATTaGCCTCTTGTGGGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: NGLPPDSQKSHGLILASRYRTHY*PLVGEV
Trigger: GACTTCCCCCACAAGAGGCAAATAGTGAGTTCTGTA...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGAGGTGGTGATGCAGTaGGTGAGCCTGTTGAAGTGT +
Preference number: 5 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCEVVMQ*VSLLKC
Trigger: ACACTTCAACAGGCTCACCAACTGCATCACCACCTC...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp TTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTTTAAAGCTCCCCGCCTaGATCAGTAGGTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LVMRIQGKMQLSCQPPRCLKLPA*ISRSLF
Trigger: GAAGAGGGACCTACTGATCAAGGCGGGGAGCTTTAA...ACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000615003.4
CDS-3UTR CAA 90 bp GCAGGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTGGTGCACGTGCCCTTaGAAGAATATGGAGAAATTG +
Preference number: 5 (lower is better)
Translates to: AGAVGDEDPGQDAAELPAWCTCP*KNMEKL
Trigger: CAATTTCTCCATATTCTTCAAAGGGCACGTGCACCA...GGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS TCA 90 bp TCTTTCATGCTTTTGCTGGACACTCCTGCCCACGTCTTGTGTAGCTaGCCTATTGGGTTGCTGCACAGAGCAGAGACGATGACGTGCACC +
Preference number: 5 (lower is better)
Translates to: SFMLLLDTPAHVLCS*PIGLLHRAETMTCT
Trigger: GGTGCACGTCATCGTCTCTGCTCTGTGCAGCAACCCAATAGGTCAGCTACACAAGACGTGGGCAGGAGTGTCCAGCAAAAGCATGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290691.10
ENST00000401461.5
ENST00000423392.5
ENST00000441897.5
ENST00000460003.4
ENST00000467354.2
ENST00000612432.4
ENST00000615003.4
CDS-3UTR CAA 90 bp ATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCTAGATGTGGTTCCCTGTGTCTTAGATCATaGAGTCCCTACAAGAACCCT +
Preference number: 5 (lower is better)
Translates to: MRIQGKMQLSCQPPRCGSLCLRS*SPYKNP
Trigger: AGGGTTCTTGTAGGGACTCAATGATCTAAGACACAG...GGAACCACATCTAGGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp GGAGCAGTTGGTGATGAGGATCCAGGGCAAGATGCAGCTGAGCTGCCAGCCTCCACTGCAGTGTCTTTTTaGCAGAGTTCTTTTAGCTCT +
Preference number: 5 (lower is better)
Translates to: GAVGDEDPGQDAAELPASTAVSF*QSSFSS
Trigger: AGAGCTAAAAGAACTCTGCAAAAAAGACACTGCAGT...GGAGGCTGGCAGCTCAGCTGCATCTTGCCCTGGATCCTCATCACCAACTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401461.5
ENST00000441897.5
ENST00000615003.4
CDS-3UTR CAA 90 bp TGCCAGCCTCCTAGATGTGGTTCCCTGGTGTCTACGGTCTGGGTGAGGGATGGTACTGCAGTGTCTTTTTaGCAGAGTTCTTTTAGCTCT +
Preference number: 5 (lower is better)
Translates to: CQPPRCGSLVSTVWVRDGTAVSF*QSSFSS
Trigger: AGAGCTAAAAGAACTCTGCAAAAAAGACACTGCAGT...ACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTAGGAGGCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS-3UTR CAA 90 bp CTCTTGTTGGTGTTGCCATCCAGGTCGTCCGGGATGGCCGAATCCAGCCTCTGTACTGCAGTGTCTTTTTaGCAGAGTTCTTTTAGCTCT +
Preference number: 5 (lower is better)
Translates to: LLLVLPSRSSGMAESSLCTAVSF*QSSFSS
Trigger: AGAGCTAAAAGAACTCTGCAAAAAAGACACTGCAGT...ACAGAGGCTGGATTCGGCCATCCCGGACGACCTGGATGGCAACACCAACAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp AATGGTCTCCCGCCTGACTCACAAAAGTCCCATGGCCTGATCCTGGCCAGCAGGATCTCATTTTCATACTaGGTTTTCACAAGTCCTGTC +
Preference number: 5 (lower is better)
Translates to: NGLPPDSQKSHGLILASRISFSY*VFTSPV
Trigger: GACAGGACTTGTGAAAACCAAGTATGAAAATGAGAT...CCTGCTGGCCAGGATCAGGCCATGGGACTTTTGTGAGTCAGGCGGGAGACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp TCTTGTGAAATAGGTGACAAATTTCTCAAGAGGCCGAAGCCTGTAATTCATGGCCAGCTCCTCACTGGGTaGGTTCTTTACAGACCCACG +
Preference number: 5 (lower is better)
Translates to: SCEIGDKFLKRPKPVIHGQLLTG*VLYRPT
Trigger: CGTGGGTCTGTAAAGAACCAACCCAGTGAGGAGCTG...GCCATGAATTACAGGCTTCGGCCTCTTGAGAAATTTGTCACCTATTTCACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp TCTTGTGAAATAGGTGACAAATTTCTCAAGAGGCCGAAGCCTGTAATTCATGGCGAGGTGGTGATGCAGTaGGTGAGCCTGTTGAAGTGT +
Preference number: 5 (lower is better)
Translates to: SCEIGDKFLKRPKPVIHGEVVMQ*VSLLKC
Trigger: ACACTTCAACAGGCTCACCAACTGCATCACCACCTC...GCCATGAATTACAGGCTTCGGCCTCTTGAGAAATTTGTCACCTATTTCACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS-3UTR CAA 90 bp TCTTGTGAAATAGGTGACAAATTTCTCAAGAGGCCGAAGCCTGTAATTCATGGCAGTGCCATCGCAGACTaGGTTTCTATGTGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: SCEIGDKFLKRPKPVIHGSAIAD*VSMCFS
Trigger: GGAAAAACACATAGAAACCAAGTCTGCGATGGCACT...GCCATGAATTACAGGCTTCGGCCTCTTGAGAAATTTGTCACCTATTTCACAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS CCA 72 bp TCCCACACAACCCTCCAGGGCACCCCTGCGTGGTTCTaGGTCCCTGGCCTGTTGCTGCCAGTGTGGAGGACA +
Preference number: 6 (lower is better)
Translates to: SHTTLQGTPAWF*VPGLLLPVWRT
Trigger: TGTCCTCCACACTGGCAGCAACAGGCCAGGGACCCAGAACCACGCAGGGGTGCCCTGGAGGGTTGTGTGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460003.4
ENST00000467354.2
CDS CAA 90 bp GCCCCAGGTCCGCCAGCAGTGGTGGTGCTGGCTCCAGGGCCGGCATaGTTAATGCGTGTTGCCCAGGACGTGGAGCAGGATCATCTGGCT +
Preference number: 6 (lower is better)
Translates to: APGPPAVVVLAPGPA*LMRVAQDVEQDHLA
Trigger: AGCCAGATGATCCTGCTCCACGTCCTGGGCAACACGCATTAACAATGCCGGCCCTGGAGCCAGCACCACCACTGCTGGCGGACCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290691.10
ENST00000401461.5
ENST00000423392.5
ENST00000441897.5
ENST00000460003.4
ENST00000467354.2
ENST00000612432.4
ENST00000615003.4
CDS GCA 72 bp GGTGCTGGCTCCAGGGCCGGCATTGTTAATGCGTGTTaGCCAGGACGTGGAGCAGGATCATCTGGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: GAGSRAGIVNAC*PGRGAGSSGLA
Trigger: GGCCAAGCCAGATGATCCTGCTCCACGTCCTGGGCAACACGCATTAACAATGCCGGCCCTGGAGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290691.10
ENST00000401461.5
ENST00000423392.5
ENST00000441897.5
ENST00000460003.4
ENST00000467354.2
ENST00000612432.4
ENST00000615003.4
CDS TCA 72 bp GGCTCCGGAAGCACCAACTGGCCTAGGACAATTTCCTaGTGGTCCTCCAAGCCCAGTCCAGGCCAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: GSGSTNWPRTIS*WSSKPSPGQER
Trigger: CCTCTCCTGGCCTGGACTGGGCTTGGAGGACCATCAGGAAATTGTCCTAGGCCAGTTGGTGCTTCCGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290691.10
ENST00000401461.5
ENST00000423392.5
ENST00000441897.5
ENST00000460003.4
ENST00000467354.2
ENST00000612432.4
ENST00000615003.4
CDS GCA 72 bp CCCTGTTCCAGAGGAGCCAACCGAGGCTCCGAGAGGTaGATCTTCAAGACAGAGCCAGTAGGGGACAGAGGC +
Preference number: 6 (lower is better)
Translates to: PCSRGANRGSER*IFKTEPVGDRG
Trigger: GCCTCTGTCCCCTACTGGCTCTGTCTTGAAGATGCACCTCTCGGAGCCTCGGTTGGCTCCTCTGGAACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441897.5
ENST00000612432.4
ENST00000615003.4
CDS GCA 72 bp CCCAGATCCACACTCCCTGTGTGTGTCACCCAGTCTTaGAGCCGGGCCTCCCTGAGACTGTTTCCTCTTCTG +
Preference number: 6 (lower is better)
Translates to: PRSTLPVCVTQS*SRASLRLFPLL
Trigger: CAGAAGAGGAAACAGTCTCAGGGAGGCCCGGCTGCAAGACTGGGTGACACACACAGGGAGTGTGGATCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS CAA 72 bp CCAGGACGTGGAGCAGGATCATCTGGCTTGGCCTCGTaGGGCTCCGGAAGCACCAACTGGCCTAGGACAATT +
Preference number: 6 (lower is better)
Translates to: PGRGAGSSGLAS*GSGSTNWPRTI
Trigger: AATTGTCCTAGGCCAGTTGGTGCTTCCGGAGCCCAACGAGGCCAAGCCAGATGATCCTGCTCCACGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290691.10
ENST00000401461.5
ENST00000423392.5
ENST00000441897.5
ENST00000460003.4
ENST00000467354.2
ENST00000612432.4
ENST00000615003.4
CDS CAA 72 bp GCCCAGATCCACACTCCCTGTGTGTGTCACCCAGTCTaGCAGCCGGGCCTCCCTGAGACTGTTTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: AQIHTPCVCHPV*QPGLPETVSSS
Trigger: AGAAGAGGAAACAGTCTCAGGGAGGCCCGGCTGCAAGACTGGGTGACACACACAGGGAGTGTGGATCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441897.5
CDS CCA 72 bp CAGGACGTGGAGCAGGATCATCTGGCTTGGCCTCGTTaGGCTCCGGAAGCACCAACTGGCCTAGGACAATTT +
Preference number: 6 (lower is better)
Translates to: QDVEQDHLAWPR*APEAPTGLGQF
Trigger: AAATTGTCCTAGGCCAGTTGGTGCTTCCGGAGCCCAACGAGGCCAAGCCAGATGATCCTGCTCCACGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290691.10
ENST00000401461.5
ENST00000423392.5
ENST00000441897.5
ENST00000460003.4
ENST00000467354.2
ENST00000612432.4
ENST00000615003.4
CDS GCA 72 bp AAGTGTGCGATGGTGGCACGAACTGTGGGTGCCATGTaGTCATTCCCCTTCAGATGTCCTTGGCCCCAGATG +
Preference number: 6 (lower is better)
Translates to: KCAMVARTVGAM*SFPFRCPWPQM
Trigger: CATCTGGGGCCAAGGACATCTGAAGGGGAATGAGCACATGGCACCCACAGTTCGTGCCACCATCGCACACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000290691.10
ENST00000401461.5
ENST00000423392.5
ENST00000441897.5
ENST00000460003.4
ENST00000467354.2
ENST00000612432.4
ENST00000615003.4
CDS CCA 72 bp GTAGCAGAACAACAACAGCAGAACAACCGGACATGGTaGTGTACAGCGGTAGTCCCAGCTGCTTGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: VAEQQQQNNRTW*CTAVVPAAWEA
Trigger: AGCCTCCCAAGCAGCTGGGACTACCGCTGTACACCACCATGTCCGGTTGTTCTGCTGTTGTTGTTCTGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467354.2
ENST00000615003.4
CDS CCA 72 bp CCAGGGACTCCCAACAGCTTCTCCCCAGTGCCGGGCTaGAAAGTTAGCATCCTGCAGATCTCATTTTCATAC +
Preference number: 6 (lower is better)
Translates to: PGTPNSFSPVPG*KVSILQISFSY
Trigger: GTATGAAAATGAGATCTGCAGGATGCTAACTTTCCAGCCCGGCACTGGGGAGAAGCTGTTGGGAGTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS CCA 72 bp CTTGTAGCAGAACAACAACAGCAGAACAACCGGACATaGTGGTGTACAGCGGTAGTCCCAGCTGCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: LVAEQQQQNNRT*WCTAVVPAAWE
Trigger: CTCCCAAGCAGCTGGGACTACCGCTGTACACCACCATGTCCGGTTGTTCTGCTGTTGTTGTTCTGCTACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467354.2
ENST00000615003.4
CDS GCA 72 bp TATATTCTCGGGAAAGACTCTCATTTTGGCCTCTTGTaGGACGAGGAGGTCGGCAGCATGTCGGGATACAGC +
Preference number: 6 (lower is better)
Translates to: YILGKDSHFGLL*DEEVGSMSGYS
Trigger: GCTGTATCCCGACATGCTGCCGACCTCCTCGTCGCACAAGAGGCCAAAATGAGAGTCTTTCCCGAGAATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS CAA 72 bp GTCTATATTCTCGGGAAAGACTCTCATTTTGGCCTCTaGTGCGACGAGGAGGTCGGCAGCATGTCGGGATAC +
Preference number: 6 (lower is better)
Translates to: VYILGKDSHFGL*CDEEVGSMSGY
Trigger: GTATCCCGACATGCTGCCGACCTCCTCGTCGCACAAGAGGCCAAAATGAGAGTCTTTCCCGAGAATATAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS CCA 72 bp AACCAATGTCTATATTCTCGGGAAAGACTCTCATTTTaGCCTCTTGTGCGACGAGGAGGTCGGCAGCATGTC +
Preference number: 6 (lower is better)
Translates to: NQCLYSRERLSF*PLVRRGGRQHV
Trigger: GACATGCTGCCGACCTCCTCGTCGCACAAGAGGCCAAAATGAGAGTCTTTCCCGAGAATATAGACATTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401461.5
ENST00000441897.5
CDS TCA 72 bp GAATCAAGGCCGGGGGATTGTCATCTGCTTTGTTTATaGAATTATGCCAAGCCCCAAGAAGAGCGATGCACA +
Preference number: 6 (lower is better)
Translates to: ESRPGDCHLLCL*NYAKPQEERCT
Trigger: TGTGCATCGCTCTTCTTGGGGCTTGGCATAATTTCATAAACAAAGCAGATGACAATCCCCCGGCCTTGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000290691.10
ENST00000423392.5
ENST00000441897.5
ENST00000460003.4
ENST00000467354.2
ENST00000612432.4
ENST00000615003.4
CDS CAA 72 bp GAGTGCCTGACTCTGAGTAGAATCAAGGCCGGGGGATaGTCATCTGCTTTGTTTATGAAATTATGCCAAGCC +
Preference number: 6 (lower is better)
Translates to: ECLTLSRIKAGG*SSALFMKLCQA
Trigger: GGCTTGGCATAATTTCATAAACAAAGCAGATGACAATCCCCCGGCCTTGATTCTACTCAGAGTCAGGCACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000290691.10
ENST00000423392.5
ENST00000441897.5
ENST00000460003.4
ENST00000467354.2
ENST00000612432.4
ENST00000615003.4