RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RGL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000143344

Ensembl transcript IDs: ENST00000304685.8, ENST00000360851.4

Found 476 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTGACACCTCCAGAGGTGTCATGATGGCTAGACCAGTGGGGCGATaGTCCTCCGAAGCTCCTCCTGGCCTCCCTAGGGTAGCAGAAAGT +
Preference number: 1 (lower is better)
Translates to: LDTSRGVMMARPVGR*SSEAPPGLPRVAES
Trigger: ACTTTCTGCTACCCTAGGGAGGCCAGGAGGAGCTTCGGAGGACCATCGCCCCACTGGTCTAGCCATCATGACACCTCTGGAGGTGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR GCA 90 bp TCCGAAGCTCCTCCTGGCCTCCCTAGGGTAGCAGAAAGTGGCAGATaGAGGCAGAGGTTGAAGGCCACCAGCTCATCCAAACCCTTTCCA +
Preference number: 1 (lower is better)
Translates to: SEAPPGLPRVAESGR*RQRLKATSSSKPFP
Trigger: TGGAAAGGGTTTGGATGAGCTGGTGGCCTTCAACCTCTGCCTGCATCTGCCACTTTCTGCTACCCTAGGGAGGCCAGGAGGAGCTTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CCA 90 bp AGGCAGAGGTTGAAGGCCACCAGCTCATCCAAACCCTTTCCAAAGTaGCCTTTCATACAGCCTGTGGCAGTTCCAGCCTCTGCAGTTGTT +
Preference number: 1 (lower is better)
Translates to: RQRLKATSSSKPFPK*PFIQPVAVPASAVV
Trigger: AACAACTGCAGAGGCTGGAACTGCCACAGGCTGTATGAAAGGCCACTTTGGAAAGGGTTTGGATGAGCTGGTGGCCTTCAACCTCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR GCA 90 bp CCTTCGCACCAAGAATATCAGGCTGAGGCTACATATACTTCAACCTaGATGAGGGCTGCCACCCTGGCCATCTCTCCTACAAGCACAGAA +
Preference number: 1 (lower is better)
Translates to: PSHQEYQAEATYTST*MRAATLAISPTSTE
Trigger: TTCTGTGCTTGTAGGAGAGATGGCCAGGGTGGCAGCCCTCATGCAGGTTGAAGTATATGTAGCCTCAGCCTGATATTCTTGGTGCGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR GCA 90 bp ATATCTGCTGACTTCACCAATGATCCTCGAACACCGGATGGTAATTaGAATCACCGCAGCCTGTTTCTCAGCCCCACTCTGCCTTTGGCA +
Preference number: 1 (lower is better)
Translates to: ISADFTNDPRTPDGN*NHRSLFLSPTLPLA
Trigger: TGCCAAAGGCAGAGTGGGGCTGAGAAACAGGCTGCGGTGATTGCAATTACCATCCGGTGTTCGAGGATCATTGGTGAAGTCAGCAGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR GCA 90 bp GACCAAAGGAAATTGGAGGACTTCCTGGCCCGTTCTTCGGTCCATTaGCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCA +
Preference number: 1 (lower is better)
Translates to: DQRKLEDFLARSSVH*RKSLNFPWCFLWNS
Trigger: TGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCAATGGACCGAAGAACGGGCCAGGAAGTCCTCCAATTTCCTTTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR GCA 90 bp GCCCGTTCTTCGGTCCATTGCCGCAAATCTCTAAACTTTCCCTGGTaGTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATCCC +
Preference number: 1 (lower is better)
Translates to: ARSSVHCRKSLNFPW*FLWNSHGYLCNANP
Trigger: GGGATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCAATGGACCGAAGAACGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CCA 90 bp TCTTTACAATGTGTAGTCCAATCTCCTGGAAAGACCAAAGGAAATTaGAGGACTTCCTGGCCCGTTCTTCGGTCCATTGCCGCAAATCTC +
Preference number: 1 (lower is better)
Translates to: SLQCVVQSPGKTKGN*RTSWPVLRSIAANL
Trigger: GAGATTTGCGGCAATGGACCGAAGAACGGGCCAGGAAGTCCTCCAATTTCCTTTGGTCTTTCCAGGAGATTGGACTACACATTGTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CCA 90 bp CTAGTTGAAACCCAGTCAGTCTTTACAATGTGTAGTCCAATCTCCTaGAAAGACCAAAGGAAATTGGAGGACTTCCTGGCCCGTTCTTCG +
Preference number: 1 (lower is better)
Translates to: LVETQSVFTMCSPIS*KDQRKLEDFLARSS
Trigger: CGAAGAACGGGCCAGGAAGTCCTCCAATTTCCTTTGGTCTTTCCAGGAGATTGGACTACACATTGTAAAGACTGACTGGGTTTCAACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CCA 90 bp TCGGTCCATTGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTaGAATTCACATGGCTATTTATGCAACGCAAATCCCACACAACTT +
Preference number: 1 (lower is better)
Translates to: SVHCRKSLNFPWCFL*NSHGYLCNANPTQL
Trigger: AAGTTGTGTGGGATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCAATGGACCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CCA 90 bp CCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATaGCTATTTATGCAACGCAAATCCCACACAACTTTTAGGAGCTGT +
Preference number: 1 (lower is better)
Translates to: PQISKLSLVLLVEFT*LFMQRKSHTTFRSC
Trigger: ACAGCTCCTAAAAGTTGTGTGGGATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR TCA 90 bp GCTTCTTGTAATACTGGCACAAAGGACACTCTCTATTCCCAGGACTaGTTCCATTTACTCAGAATATACGAGACTAGGTTCTCAGTTTCT +
Preference number: 1 (lower is better)
Translates to: ASCNTGTKDTLYSQD*FHLLRIYETRFSVS
Trigger: AGAAACTGAGAACCTAGTCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTGTGCCAGTATTACAAGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR TCA 90 bp TCCAGACACATAGTTTTACATGCAAAAGGCAATCAGAGAAGGCAATaGAGCAGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCAC +
Preference number: 1 (lower is better)
Translates to: SRHIVLHAKGNQRRQ*SSDIPRQIRVQMSH
Trigger: GTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACTGCTTCATTGCCTTCTCTGATTGCCTTTTGCATGTAAAACTATGTGTCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR GCA 90 bp CTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATaGAACGCAAATCCCACACAACTTTTAGGAGCTGTATTATGGGAT +
Preference number: 1 (lower is better)
Translates to: LNFPWCFLWNSHGYL*NANPTQLLGAVLWD
Trigger: ATCCCATAATACAGCTCCTAAAAGTTGTGTGGGATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR TCA 90 bp CATAGTTTTACATGCAAAAGGCAATCAGAGAAGGCAATGAAGCAGTaGCATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTT +
Preference number: 1 (lower is better)
Translates to: HSFTCKRQSEKAMKQ*HSKTDKSPNESPFF
Trigger: AAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACTGCTTCATTGCCTTCTCTGATTGCCTTTTGCATGTAAAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCATACTTCAACCTGCATaGGGGCTGCCACCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGILQPA*GLPPWP
Trigger: TGGCCAGGGTGGCAGCCCTCATGCAGGTTGAAGTAT...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCCTTGTTTCAGGAGCTTaGCACCTCCAGAGGTGTCAT +
Preference number: 2 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGLVSGA*HLQRCH
Trigger: ATGACACCTCTGGAGGTGTCAAGCTCCTGAAACAAG...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACAGCCCCACTCTGCCTTTaGCAAACAAGGGGCCACTGG +
Preference number: 2 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTAPLCL*QTRGHW
Trigger: CCAGTGGCCCCTTGTTTGCCAAAGGCAGAGTGGGGC...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACAAGACCAGTGGGGCGATaGTCCTCCGAAGCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTRPVGR*SSEAPP
Trigger: AGGAGGAGCTTCGGAGGACCATCGCCCCACTGGTCT...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATCCTCCAGAGGTGTCATaGTGGCTAGACCAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYPPEVS*WLDQWG
Trigger: GCCCCACTGGTCTAGCCATCATGACACCTCTGGAGG...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CAA 90 bp AGACCAAAGGAAATTGGAGGACTTCCTGGCCCGTTCTTCGGTCCATaGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTC +
Preference number: 2 (lower is better)
Translates to: RPKEIGGLPGPFFGP*PQISKLSLVLLVEF
Trigger: GAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCAATGGACCGAAGAACGGGCCAGGAAGTCCTCCAATTTCCTTTGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCTTATCTGGTGGCACTTaGTTGAGAAAGTCATCCTCT +
Preference number: 2 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGLSGGT*LRKSSS
Trigger: AGAGGATGACTTTCTCAATCAAGTGCCACCAGATAA...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCCCAAGAATATCAGGCTaGGGCTACATATACTTCAAC +
Preference number: 2 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGPRISG*GYIYFN
Trigger: GTTGAAGTATATGTAGCCTCAGCCTGATATTCTTGG...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTAGACCAGTGGGGCGATaGTCCTCCGAAGCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALRPVGR*SSEAPP
Trigger: AGGAGGAGCTTCGGAGGACCATCGCCCCACTGGTCT...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTGATGCAGGCAGAGGTTaGAGGCCACCAGCTCATCCA +
Preference number: 2 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALDAGRG*RPPAHP
Trigger: TGGATGAGCTGGTGGCCTTCAACCTCTGCCTGCATC...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCAGTGTGATGGTGTTATaGGAGACAAAAGTGTCACTT +
Preference number: 2 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGSVMVL*ETKVSL
Trigger: AAGTGACACTTTTGTCTCTCATAACACCATCACACT...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACAGCCCCACTCTGCCTTTaGCAAACAAGGGGCCACTGG +
Preference number: 2 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTAPLCL*QTRGHW
Trigger: CCAGTGGCCCCTTGTTTGCCAAAGGCAGAGTGGGGC...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CCA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATCTTTCATACAGCCTGTaGCAGTTCCAGCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNLSYSL*QFQPLQ
Trigger: CTGCAGAGGCTGGAACTGCCACAGGCTGTATGAAAG...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACAACATATATGTCTTGGTaGTCACGCCCTCAACCAGGC +
Preference number: 2 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTTYMSW*SRPQPG
Trigger: GCCTGGTTGAGGGCGTGACCACCAAGACATATATGT...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCGATGCAGGCAGAGGTTaGAGGCCACCAGCTCATCCA +
Preference number: 2 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCDAGRG*RPPAHP
Trigger: TGGATGAGCTGGTGGCCTTCAACCTCTGCCTGCATC...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACCTCCAGAGGTGTCATaGTGGCTAGACCAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPPPEVS*WLDQWG
Trigger: GCCCCACTGGTCTAGCCATCATGACACCTCTGGAGG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR GCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATTTCTCAGCCCCACTCTaGCTTTGGCAAACAAGGGGC +
Preference number: 2 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANFSAPL*LWQTRG
Trigger: GCCCCTTGTTTGCCAAAGGCAGAGTGGGGCTGAGAA...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR GCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCTCAAACGTAGTCAATTaGAGTAGAAATTTCCACACC +
Preference number: 2 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGSNVVN*SRNFHT
Trigger: GGTGTGGAAATTTCTACTGCAATTGACTACGTTTGA...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACATGCCAGAAACTGAAATaGGCTTGTTTCAGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTCQKLK*ACFRSL
Trigger: CAAGCTCCTGAAACAAGCTCATTTCAGTTTCTGGCA...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATGCAGGGAACATCTTCTaGGGGGCTATTAACGGGACA +
Preference number: 2 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANAGNIF*GAINGT
Trigger: TGTCCCGTTAATAGCCCCTCAGAAGATGTTCCCTGC...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR GCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCACACCGGATGGTAATTaGAATCACCGCAGCCTGTTT +
Preference number: 2 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTTPDGN*NHRSLF
Trigger: AAACAGGCTGCGGTGATTGCAATTACCATCCGGTGT...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR GCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACAGCAGAAAGTGGCAGATaGAGGCAGAGGTTGAAGGCC +
Preference number: 2 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTAESGR*RQRLKA
Trigger: GGCCTTCAACCTCTGCCTGCATCTGCCACTTTCTGC...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CAA 90 bp TCTTCGGTCCATTGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTaGTGGAATTCACATGGCTATTTATGCAACGCAAATCCCACACAA +
Preference number: 2 (lower is better)
Translates to: SSVHCRKSLNFPWCF*WNSHGYLCNANPTQ
Trigger: TTGTGTGGGATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCAATGGACCGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCGCAGGGAACATCTTCTaGGGGGCTATTAACGGGACA +
Preference number: 2 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCAGNIF*GAINGT
Trigger: TGTCCCGTTAATAGCCCCTCAGAAGATGTTCCCTGC...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR GCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCATTCTCAGCCCCACTCTaGCTTTGGCAAACAAGGGGC +
Preference number: 2 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPFSAPL*LWQTRG
Trigger: GCCCCTTGTTTGCCAAAGGCAGAGTGGGGCTGAGAA...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATAAGGCAATGAAGCAGTaGCATTCCAAGACAGATAAG +
Preference number: 2 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNKAMKQ*HSKTDK
Trigger: CTTATCTGTCTTGGAATGTCACTGCTTCATTGCCTT...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACATGCTTTTTGACTAGTTaGAACCCAGTCAGTCTTTAC +
Preference number: 2 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTCFLTS*NPVSLY
Trigger: GTAAAGACTGACTGGGTTTCAACTAGTCAAAAAGCA...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR GCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATACACCGGATGGTAATTaGAATCACCGCAGCCTGTTT +
Preference number: 2 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANTPDGN*NHRSLF
Trigger: AAACAGGCTGCGGTGATTGCAATTACCATCCGGTGT...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR GCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACGCAGAAAGTGGCAGATaGAGGCAGAGGTTGAAGGCC +
Preference number: 2 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNAESGR*RQRLKA
Trigger: GGCCTTCAACCTCTGCCTGCATCTGCCACTTTCTGC...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATGTACTAAGATCCAGATaGCAAAAGACTCCAGACACA +
Preference number: 2 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYVLRSR*QKTPDT
Trigger: TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTAC...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATCTCTATTCCCAGGACTaGTTCCATTTACTCAGAATA +
Preference number: 2 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYLYSQD*FHLLRI
Trigger: TATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAG...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACTTGTTTCAGGAGCTTaGCACCTCCAGAGGTGTCAT +
Preference number: 2 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPLVSGA*HLQRCH
Trigger: ATGACACCTCTGGAGGTGTCAAGCTCCTGAAACAAG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR GCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATCTCCATGTTACAATCTaGACTTCATATTCCGGGTTT +
Preference number: 2 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYLHVTI*TSYSGF
Trigger: AAACCCGGAATATGAAGTGCAGATTGTAACATGGAG...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGAGTCAAAGAGAATCAGTaGATCGTTCATCCTTTTCAT +
Preference number: 2 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRVKENQ*IVHPFH
Trigger: ATGAAAAGGATGAACGATTCACTGATTCTCTTTGAC...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATGTCAAAGAGAATCAGTaGATCGTTCATCCTTTTCAT +
Preference number: 2 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANVKENQ*IVHPFH
Trigger: ATGAAAAGGATGAACGATTCACTGATTCTCTTTGAC...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACACTCTATTCCCAGGACTaGTTCCATTTACTCAGAATA +
Preference number: 2 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTLYSQD*FHLLRI
Trigger: TATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAG...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR GCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATTCAAACGTAGTCAATTaGAGTAGAAATTTCCACACC +
Preference number: 2 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANSNVVN*SRNFHT
Trigger: GGTGTGGAAATTTCTACTGCAATTGACTACGTTTGA...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR GCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATGTAAGTAAAATAGGATaGTGTTATCAGCAGGGAACA +
Preference number: 2 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANVSKIG*CYQQGT
Trigger: TGTTCCCTGCTGATAACAGCATCCTATTTTACTTAC...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR GCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACCTATCATAATGCTTTaGACACCACAGGAACTCAAT +
Preference number: 2 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPPIIML*TPQELN
Trigger: ATTGAGTTCCTGTGGTGTGCAAAGCATTATGATAGG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACATTGCGCTTTCTTTTCTaGCTTCATTACCAAAGAACA +
Preference number: 2 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTLRFLF*LHYQRT
Trigger: TGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAA...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACGTACTAAGATCCAGATaGCAAAAGACTCCAGACACA +
Preference number: 2 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNVLRSR*QKTPDT
Trigger: TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTAC...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR TCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACAGTGTGATGGTGTTATaGGAGACAAAAGTGTCACTT +
Preference number: 2 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNSVMVL*ETKVSL
Trigger: AAGTGACACTTTTGTCTCTCATAACACCATCACACT...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR GCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAACACATAGTTTTACATaGAAAAGGCAATCAGAGAAG +
Preference number: 2 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPTHSFT*KRQSEK
Trigger: CTTCTCTGATTGCCTTTTGCATGTAAAACTATGTGT...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACTTGCGCTTTCTTTTCTaGCTTCATTACCAAAGAACA +
Preference number: 2 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNLRFLF*LHYQRT
Trigger: TGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAA...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR TCA 72 bp GCTTGTTTCAGGAGCTTGACACCTCCAGAGGTGTCATaGTGGCTAGACCAGTGGGGCGATGGTCCTCCGAAG +
Preference number: 3 (lower is better)
Translates to: ACFRSLTPPEVS*WLDQWGDGPPK
Trigger: CTTCGGAGGACCATCGCCCCACTGGTCTAGCCATCATGACACCTCTGGAGGTGTCAAGCTCCTGAAACAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR GCA 72 bp GACTTCACCAATGATCCTCGAACACCGGATGGTAATTaGAATCACCGCAGCCTGTTTCTCAGCCCCACTCTG +
Preference number: 3 (lower is better)
Translates to: DFTNDPRTPDGN*NHRSLFLSPTL
Trigger: CAGAGTGGGGCTGAGAAACAGGCTGCGGTGATTGCAATTACCATCCGGTGTTCGAGGATCATTGGTGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CCA 72 bp TTGAAGGCCACCAGCTCATCCAAACCCTTTCCAAAGTaGCCTTTCATACAGCCTGTGGCAGTTCCAGCCTCT +
Preference number: 3 (lower is better)
Translates to: LKATSSSKPFPK*PFIQPVAVPAS
Trigger: AGAGGCTGGAACTGCCACAGGCTGTATGAAAGGCCACTTTGGAAAGGGTTTGGATGAGCTGGTGGCCTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCCGGAAATACACGGGGTaGCCAGAAACTGAAATGAGC +
Preference number: 3 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGRKYTG*PETEMS
Trigger: GCTCATTTCAGTTTCTGGCAACCCCGTGTATTTCCG...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR GCA 72 bp CAAGAATATCAGGCTGAGGCTACATATACTTCAACCTaGATGAGGGCTGCCACCCTGGCCATCTCTCCTACA +
Preference number: 3 (lower is better)
Translates to: QEYQAEATYTST*MRAATLAISPT
Trigger: TGTAGGAGAGATGGCCAGGGTGGCAGCCCTCATGCAGGTTGAAGTATATGTAGCCTCAGCCTGATATTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CCA 72 bp TGTGTAGTCCAATCTCCTGGAAAGACCAAAGGAAATTaGAGGACTTCCTGGCCCGTTCTTCGGTCCATTGCC +
Preference number: 3 (lower is better)
Translates to: CVVQSPGKTKGN*RTSWPVLRSIA
Trigger: GGCAATGGACCGAAGAACGGGCCAGGAAGTCCTCCAATTTCCTTTGGTCTTTCCAGGAGATTGGACTACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCGCCTATCATAATGCTTaGCACACCACAGGAACTCAA +
Preference number: 3 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGAYHNA*HTTGTQ
Trigger: TTGAGTTCCTGTGGTGTGCAAAGCATTATGATAGGC...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR GCA 72 bp AAATTGGAGGACTTCCTGGCCCGTTCTTCGGTCCATTaGCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTG +
Preference number: 3 (lower is better)
Translates to: KLEDFLARSSVH*RKSLNFPWCFL
Trigger: CAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCAATGGACCGAAGAACGGGCCAGGAAGTCCTCCAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTAGCCCCACTCTGCCTTaGGCAAACAAGGGGCCACTG +
Preference number: 3 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALSPTLP*ANKGPL
Trigger: CAGTGGCCCCTTGTTTGCCAAAGGCAGAGTGGGGCT...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR TCA 72 bp GAAAACGGAAATACACGGGGTTGCCAGAAACTGAAATaGGCTTGTTTCAGGAGCTTGACACCTCCAGAGGTG +
Preference number: 3 (lower is better)
Translates to: ENGNTRGCQKLK*ACFRSLTPPEV
Trigger: CACCTCTGGAGGTGTCAAGCTCCTGAAACAAGCTCATTTCAGTTTCTGGCAACCCCGTGTATTTCCGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CCA 72 bp CCAAACCCTTTCCAAAGTGGCCTTTCATACAGCCTGTaGCAGTTCCAGCCTCTGCAGTTGTTTTTATCTGGT +
Preference number: 3 (lower is better)
Translates to: PNPFQSGLSYSL*QFQPLQLFLSG
Trigger: ACCAGATAAAAACAACTGCAGAGGCTGGAACTGCCACAGGCTGTATGAAAGGCCACTTTGGAAAGGGTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAGCCCCACTCTGCCTTaGGCAAACAAGGGGCCACTG +
Preference number: 3 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCSPTLP*ANKGPL
Trigger: CAGTGGCCCCTTGTTTGCCAAAGGCAGAGTGGGGCT...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCGGCCATTGTGCAAATTaGTTTTTCCATAGTCCATAC +
Preference number: 3 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGGHCAN*FFHSPY
Trigger: GTATGGACTATGGAAAAACAAATTTGCACAATGGCC...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATGCTTGTTTCAGGAGCTaGACACCTCCAGAGGTGTCA +
Preference number: 3 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNACFRS*TPPEVS
Trigger: TGACACCTCTGGAGGTGTCAAGCTCCTGAAACAAGC...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATGCTTGTTTCAGGAGCTaGACACCTCCAGAGGTGTCA +
Preference number: 3 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYACFRS*TPPEVS
Trigger: TGACACCTCTGGAGGTGTCAAGCTCCTGAAACAAGC...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACACCGTTCTTCGGTCCATaGCCGCAAATCTCTAAACTT +
Preference number: 3 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTPFFGP*PQISKL
Trigger: AAGTTTAGAGATTTGCGGCAATGGACCGAAGAACGG...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CCA 72 bp ACCCAGTCAGTCTTTACAATGTGTAGTCCAATCTCCTaGAAAGACCAAAGGAAATTGGAGGACTTCCTGGCC +
Preference number: 3 (lower is better)
Translates to: TQSVFTMCSPIS*KDQRKLEDFLA
Trigger: GGCCAGGAAGTCCTCCAATTTCCTTTGGTCTTTCCAGGAGATTGGACTACACATTGTAAAGACTGACTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CCA 72 bp CACAGGATGAACACGGGCACAACATATATGTCTTGGTaGTCACGCCCTCAACCAGGCCAATGGTTTTATTTA +
Preference number: 3 (lower is better)
Translates to: HRMNTGTTYMSW*SRPQPGQWFYL
Trigger: TAAATAAAACCATTGGCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CCA 72 bp ATACACAGGATGAACACGGGCACAACATATATGTCTTaGTGGTCACGCCCTCAACCAGGCCAATGGTTTTAT +
Preference number: 3 (lower is better)
Translates to: IHRMNTGTTYMS*WSRPQPGQWFY
Trigger: ATAAAACCATTGGCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR GCA 72 bp CCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATaGAACGCAAATCCCACACAACTTTTAGGAGCTGTA +
Preference number: 3 (lower is better)
Translates to: PWCFLWNSHGYL*NANPTQLLGAV
Trigger: TACAGCTCCTAAAAGTTGTGTGGGATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR GCA 72 bp TCGGTCCATTGCCGCAAATCTCTAAACTTTCCCTGGTaGTTCTTGTGGAATTCACATGGCTATTTATGCAAC +
Preference number: 3 (lower is better)
Translates to: SVHCRKSLNFPW*FLWNSHGYLCN
Trigger: GTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCAATGGACCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CCA 72 bp ATGGCTTTTAGTTCAAACCCCAGCACAGCTCAGACTTaGAAGGAAGAGTGTGATGGTGTTATGAGAGACAAA +
Preference number: 3 (lower is better)
Translates to: MAFSSNPSTAQT*KEECDGVMRDK
Trigger: TTTGTCTCTCATAACACCATCACACTCTTCCTTCCAAGTCTGAGCTGTGCTGGGGTTTGAACTAAAAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCCGGAAATACACGGGGTaGCCAGAAACTGAAATGAGC +
Preference number: 3 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCRKYTG*PETEMS
Trigger: GCTCATTTCAGTTTCTGGCAACCCCGTGTATTTCCG...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTGAAACTGAAATGAGCTaGTTTCAGGAGCTTGACACC +
Preference number: 3 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALETEMS*FQELDT
Trigger: GGTGTCAAGCTCCTGAAACAAGCTCATTTCAGTTTC...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR TCA 72 bp ACATGCAAAAGGCAATCAGAGAAGGCAATGAAGCAGTaGCATTCCAAGACAGATAAGAGTCCAAATGAGTCA +
Preference number: 3 (lower is better)
Translates to: TCKRQSEKAMKQ*HSKTDKSPNES
Trigger: TGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACTGCTTCATTGCCTTCTCTGATTGCCTTTTGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR TCA 72 bp CAGCTCAGACTTGGAAGGAAGAGTGTGATGGTGTTATaGGAGACAAAAGTGTCACTTAACAATGATACTGTG +
Preference number: 3 (lower is better)
Translates to: QLRLGRKSVMVL*ETKVSLNNDTV
Trigger: CACAGTATCATTGTTAAGTGACACTTTTGTCTCTCATAACACCATCACACTCTTCCTTCCAAGTCTGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGACAACTTCCCAGGCCATaGTGCAAATTTGTTTTTCCA +
Preference number: 3 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRQLPRP*CKFVFP
Trigger: TGGAAAAACAAATTTGCACAATGGCCTGGGAAGTTG...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGGCCTATCATAATGCTTaGCACACCACAGGAACTCAA +
Preference number: 3 (lower is better)
Translates to: FALSFLASLPKNMVICAMAYHNA*HTTGTQ
Trigger: TTGAGTTCCTGTGGTGTGCAAAGCATTATGATAGGC...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CCA 72 bp TCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATaGCTATTTATGCAACGCAAATCCCACACAACTTTT +
Preference number: 3 (lower is better)
Translates to: SKLSLVLLVEFT*LFMQRKSHTTF
Trigger: AAAAGTTGTGTGGGATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCATTTATCTGGTGGCACTaGATTGAGAAAGTCATCCTC +
Preference number: 3 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPFIWWH*IEKVIL
Trigger: GAGGATGACTTTCTCAATCAAGTGCCACCAGATAAA...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATCACCTGAGGAATAAATaGCACATAATAAAGAGGTAC +
Preference number: 3 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANHLRNK*HIIKRY
Trigger: GTACCTCTTTATTATGTGCAATTTATTCCTCAGGTG...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR TCA 72 bp ATCGAACAGGGATTGAAAACAGAAGAAAGTGCTTTTTaGCTAGTTGAAACCCAGTCAGTCTTTACAATGTGT +
Preference number: 3 (lower is better)
Translates to: IEQGLKTEESAF*LVETQSVFTMC
Trigger: ACACATTGTAAAGACTGACTGGGTTTCAACTAGTCAAAAAGCACTTTCTTCTGTTTTCAATCCCTGTTCGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR-3UTR CAA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACACCTGAGGAATAAATaGCACATAATAAAGAGGTAC +
Preference number: 3 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPHLRNK*HIIKRY
Trigger: GTACCTCTTTATTATGTGCAATTTATTCCTCAGGTG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCCTGCATGATGCGCCCTaGTCGGAGGCCAACGCAATG +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGLHDAP*SEANAM
Trigger: CATTGCGTTGGCCTCCGAGCAGGGCGCATCATGCAG...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360851.4
CDS-3UTR TCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCGCACGTGAATTCTGCTaGCTCTCCACCCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGAREFC*LSTLQF
Trigger: GAACTGGAGGGTGGAGAGTCAGCAGAATTCACGTGC...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCCTTTGTCCTCCGAGATaGCCTGCACCAGCTCGTACT +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGLCPPR*PAPART
Trigger: AGTACGAGCTGGTGCAGGTCATCTCGGAGGACAAAG...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCTGCGCGAACGCTGCATaGTGCGCCCTGCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTCANAA*CALLGG
Trigger: GCCTCCGAGCAGGGCGCATCATGCAGCGTTCGCGCA...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360851.4
CDS-3UTR GCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCCTCTCGGAAGTCTTCTaGACACTGGTCAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGLSEVF*TLVKPG
Trigger: GCCTGGCTTGACCAGTGTGCAGAAGACTTCCGAGAG...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCGGCCAACGCAATGTCTaGTGGGCTCAGCCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTGQRNV*WAQPRG
Trigger: GCCGCGGGGCTGAGCCCAGCAGACATTGCGTTGGCC...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360851.4
CDS-3UTR GCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCAAGGCCACCTGCCGCTaGTGCCCATCCCCGCCAATC +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTKATCR*CPSPPI
Trigger: GATTGGCGGGGATGGGCAGCAGCGGCAGGTGGCCTT...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR CCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATGAGGCTTGGGCGAGGTaGTGCTGGCGTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYEAWAR*CWRQQL
Trigger: CAGCTGCTGACGCCAGCACCACCTCGCCCAAGCCTC...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCTGCCACGAGATCTTCTaGGAAGCACGTGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGCHEIF*EAREFC
Trigger: GCAGAATTCACGTGCTTCTCAGAAGATCTCGTGGCA...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCGTGAGGGTATTAAACTaGGAGATGGTGGCACGGATC +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGVRVLN*EMVARI
Trigger: GATCCGTGCCACCATCTCTCAGTTTAATACCCTCAC...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATGCTTGGGCGAGGTGGTaGTGGCGTCAGCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNAWARW*WRQQLL
Trigger: AAGCAGCTGCTGACGCCAGCACCACCTCGCCCAAGC...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTCCGGTGCGCGAACGCTaGATGATGCGCCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALPVRER*MMRPAR
Trigger: CCGAGCAGGGCGCATCATGCAGCGTTCGCGCACCGG...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360851.4
CDS-3UTR CCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCAAGTCTTCTGCACACTaGTCAAGCCAGGCCCTTAGT +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGKSSAH*SSQALS
Trigger: ACTAAGGGCCTGGCTTGACCAGTGTGCAGAAGACTT...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCTGCCTCTGGAACCACTaGATGAACTTTTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGCLWNH*MNFWSG
Trigger: CCCAGACCAAAAGTTCATCCAGTGGTTCCAGAGGCA...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCAGGAGCTGCTGCCTCTaGAACCACTGGATGAACTTT +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGRSCCL*NHWMNF
Trigger: AAAGTTCATCCAGTGGTTCCAGAGGCAGCAGCTCCT...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATTGCTCTTCCGAGGCTTaGGCGAGGTGGTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNCSSEA*ARWCWR
Trigger: ACGCCAGCACCACCTCGCCCAAGCCTCGGAAGAGCA...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACAAGCTCCCGCTGGCAGTaGACTTGGGCTGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTSSRWQ*TWAALW
Trigger: CCAAAGAGCAGCCCAAGTCCACTGCCAGCGGGAGCT...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGACAACGCAATGTCTGCTaGGCTCAGCCCCGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRQRNVC*AQPRGA
Trigger: GGCGCCGCGGGGCTGAGCCCAGCAGACATTGCGTTG...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360851.4
CDS-3UTR TCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCAGGTTTCATATTGACTaGCTGTGTGTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGRFHID*LCVLEA
Trigger: TGCCTCCAGGACACACAGTCAGTCAATATGAAACCT...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATCTCCTCGGCGGGGTCTaGGTCCAGATTGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNLLGGV*VQIVLQ
Trigger: CTGAAGCACAATCTGGACTCAGACCCCGCCGAGGAG...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCCTCCTCGGCGGGGTCTaGGTCCAGATTGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTLLGGV*VQIVLQ
Trigger: CTGAAGCACAATCTGGACTCAGACCCCGCCGAGGAG...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCCCTCCAGAGGTGTCATaGTGGCTAGACCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTPPEVS*WLDQWG
Trigger: GCCCCACTGGTCTAGCCATCATGACACCTCTGGAGG...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCGGGGTTGCCAGAAACTaGAATGAGCTTGTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGGVARN*NELVSG
Trigger: TCCTGAAACAAGCTCATTTCAGTTTCTGGCAACCCC...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCCGGCAATTAGAACGATaGTGGGCGCCCGGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTRQLER*WAPGCA
Trigger: TGCACACCCGGGCGCCCAGCATCGTTCTAATTGCCG...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR GCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACAGGTCAGTCAGGAAGGTaGCCAGGTAGGGCACAGTTC +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTGQSGR*PGRAQF
Trigger: GAACTGTGCCCTACCTGGGCACCTTCCTGACTGACC...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCACACCGGATGGTAATTaGAATCACCGCAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGTPDGN*NHRSLF
Trigger: AAACAGGCTGCGGTGATTGCAATTACCATCCGGTGT...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACATTTCGACTCCGTCCTTaGGGACTTCCCGCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTFRLRP*GLPAGQ
Trigger: TTGGCCAGCGGGAAGTCCCCAAGGACGGAGTCGAAA...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR CCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTGTCCTGGAGGCAGCTaGTCCCCTTCAACCCCTAGC +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYCPGGS*SPSTPS
Trigger: GCTAGGGGTTGAAGGGGACCAGCTGCCTCCAGGACA...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTGGGCGAGGTGGTGCTaGCGTCAGCAGCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYWARWC*RQQLLQ
Trigger: TTGAAGCAGCTGCTGACGCCAGCACCACCTCGCCCA...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCTGGGCGAGGTGGTGCTaGCGTCAGCAGCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTWARWC*RQQLLQ
Trigger: TTGAAGCAGCTGCTGACGCCAGCACCACCTCGCCCA...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCAGCTCCCGCTGGCAGTaGACTTGGGCTGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTSSRWQ*TWAALW
Trigger: CCAAAGAGCAGCCCAAGTCCACTGCCAGCGGGAGCT...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATGCCCCACTCTGCCTTTaGCAAACAAGGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYAPLCL*QTRGHW
Trigger: CCAGTGGCCCCTTGTTTGCCAAAGGCAGAGTGGGGC...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATCCATCCCCGCCAATCTaGGACCCCCTAGACTGGACC +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANPSPPI*DPLDWT
Trigger: GGTCCAGTCTAGGGGGTCTCAGATTGGCGGGGATGG...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR TCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATGCCCTCCTCAGCCTCTaGGTGGTTCGACTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANALLSL*VVRLAG
Trigger: TCCTGCGAGTCGAACCACTCAGAGGCTGAGGAGGGC...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAAAGCCAAGGCCACCTaGCGCTGCTGCCCATCCCCG +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCKAKAT*RCCPSP
Trigger: CGGGGATGGGCAGCAGCGGCAGGTGGCCTTGGCTTT...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR GCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATCCCTTCGAGACCAAATaGAGCCCAGGCAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYPFETK*SPGSGE
Trigger: CTCACCACTGCCTGGGCTGCATTTGGTCTCGAAGGG...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACATCTGTCAGGAGCTGCTaGCTCTGGAACCACTGGATG +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTSVRSC*LWNHWM
Trigger: CATCCAGTGGTTCCAGAGGCAGCAGCTCCTGACAGA...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCTCCTCTGTCAGGAGCTaGTGCCTCTGGAACCACTGG +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTSSVRS*CLWNHW
Trigger: CCAGTGGTTCCAGAGGCAGCAGCTCCTGACAGAGGA...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCCAGCATTCGGTCCCTTaGGACGGCAGCCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTQHSVP*DGSPSL
Trigger: AAGACTTGGGCTGCCGTCCCAAGGGACCGAATGCTG...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCGAGGCTTGGGCGAGGTaGTGCTGGCGTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCEAWAR*CWRQQL
Trigger: CAGCTGCTGACGCCAGCACCACCTCGCCCAAGCCTC...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGACACCAGAGCTCCCGCTaGCAGTGGACTTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRHQSSR*QWTWAA
Trigger: AGCAGCCCAAGTCCACTGCCAGCGGGAGCTCTGGTG...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATCAAACAAGGGGCCACTaGTCCCTCCCTTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNQTRGH*SLPSEG
Trigger: ACCCTCTGAAGGGAGGGACCAGTGGCCCCTTGTTTG...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CAA 72 bp CGGAAATACACGGGGTTGCCAGAAACTGAAATGAGCTaGTTTCAGGAGCTTGACACCTCCAGAGGTGTCATG +
Preference number: 4 (lower is better)
Translates to: RKYTGLPETEMS*FQELDTSRGVM
Trigger: CATGACACCTCTGGAGGTGTCAAGCTCCTGAAACAAGCTCATTTCAGTTTCTGGCAACCCCGTGTATTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CAA 72 bp GAAATTGGAGGACTTCCTGGCCCGTTCTTCGGTCCATaGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: EIGGLPGPFFGP*PQISKLSLVLL
Trigger: AAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCAATGGACCGAAGAACGGGCCAGGAAGTCCTCCAATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATTCTTCACCCCAGTCCTaGATCGAGCTCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNSSPQS*IELSSV
Trigger: GACAGAGGAGAGCTCGATTCAGGACTGGGGTGAAGA...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR TCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCGCACGTGAATTCTGCTaGCTCTCCACCCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTAREFC*LSTLQF
Trigger: GAACTGGAGGGTGGAGAGTCAGCAGAATTCACGTGC...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACATGGGAGTGGGACTGGTaGTCATGTCAGACCCTAGAA +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTWEWDW*SCQTLE
Trigger: TTCTAGGGTCTGACATGATCACCAGTCCCACTCCCA...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATCGCAGGATGACACGCTaGCAGAGTCCATGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYRRMTR*QSPCFH
Trigger: GTGAAAGCATGGACTCTGTCAGCGTGTCATCCTGCG...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGACCTCCAGAGGTGTCATaGTGGCTAGACCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRPPEVS*WLDQWG
Trigger: GCCCCACTGGTCTAGCCATCATGACACCTCTGGAGG...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACACAGATCCCGTTGCGATaGTGTCACACAGCACTGACA +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTQIPLR*CHTALT
Trigger: TGTCAGTGCTGTGTGACAGCATCGCAACGGGATCTG...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR GCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCTCTGTCAGGAGCTGCTaGCTCTGGAACCACTGGATG +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTSVRSC*LWNHWM
Trigger: CATCCAGTGGTTCCAGAGGCAGCAGCTCCTGACAGA...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATTTCTCAGCCCCACTCTaGCTTTGGCAAACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNFSAPL*LWQTRG
Trigger: GCCCCTTGTTTGCCAAAGGCAGAGTGGGGCTGAGAA...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCTTCTCAGCCCCACTCTaGCTTTGGCAAACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTFSAPL*LWQTRG
Trigger: GCCCCTTGTTTGCCAAAGGCAGAGTGGGGCTGAGAA...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATGCAGAAAGTGGCAGATaGAGGCAGAGGTTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYAESGR*RQRLKA
Trigger: GGCCTTCAACCTCTGCCTGCATCTGCCACTTTCTGC...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATGTCCTGGAGGCAGCTaGTCCCCTTCAACCCCTAGC +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRCPGGS*SPSTPS
Trigger: GCTAGGGGTTGAAGGGGACCAGCTGCCTCCAGGACA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCAGCTGCAGCCGCCTCTaGGTACGCTTCTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTSCSRL*VRFWFS
Trigger: AGAAAACCAGAAGCGTACCCAGAGGCGGCTGCAGCT...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATACACCCATGTCCTTCTaGAGCTGCAGCCGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANTPMSF*SCSRLW
Trigger: CCAGAGGCGGCTGCAGCTCCAGAAGGACATGGGTGT...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGACGCTGGCAGTGGACTTaGGCTGCTCTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRRWQWT*AALWWE
Trigger: CTCCCACCAAAGAGCAGCCCAAGTCCACTGCCAGCG...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGAAGACCAGTGGGGCGATaGTCCTCCGAAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRRPVGR*SSEAPP
Trigger: AGGAGGAGCTTCGGAGGACCATCGCCCCACTGGTCT...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCGTACTAAGATCCAGATaGCAAAAGACTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGVLRSR*QKTPDT
Trigger: TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTAC...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCTCCACTTCTTGCTTCTaGAACTGCTCAAGAAGATTT +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGSTSCF*NCSRRF
Trigger: AAATCTTCTTGAGCAGTTTCAGAAGCAAGAAGTGGA...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCCTTCCTCTTCCAGGCTaGAGGAGATCGTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTLPLPG*RRSCWE
Trigger: TTCCCAACACGATCTCCTTCAGCCTGGAAGAGGAAG...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGGCCCTCCTCAGCCTCTaGGTGGTTCGACTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: FALSFLASLPKNMVICAMALLSL*VVRLAG
Trigger: TCCTGCGAGTCGAACCACTCAGAGGCTGAGGAGGGC...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACACCTGGCTCGTCAACATaGTGCTCTTGTACATGTTGC +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTPGSST*CSCTCC
Trigger: GCAACATGTACAAGAGCATCATGTTGACGAGCCAGG...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATGATGCAGGCAGAGGTTaGAGGCCACCAGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANDAGRG*RPPAHP
Trigger: TGGATGAGCTGGTGGCCTTCAACCTCTGCCTGCATC...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCTGCTTTTTGACTAGTTaGAACCCAGTCAGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGCFLTS*NPVSLY
Trigger: GTAAAGACTGACTGGGTTTCAACTAGTCAAAAAGCA...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATGGTCAGTCAGGAAGGTaGCCAGGTAGGGCACAGTTC +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANGQSGR*PGRAQF
Trigger: GAACTGTGCCCTACCTGGGCACCTTCCTGACTGACC...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGGCTTGGGCGAGGTGGTaGTGGCGTCAGCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FALSFLASLPKNMVICAMAWARW*WRQQLL
Trigger: AAGCAGCTGCTGACGCCAGCACCACCTCGCCCAAGC...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGAGCAGTGGACTTGGGCTaGTCTTTGGTGGGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRAVDLG*SLVGVG
Trigger: TCCCACTCCCACCAAAGAGCAGCCCAAGTCCACTGC...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATTCCTCCGAGATGACCTaGACCAGCTCGTACTCCTCG +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANSSEMT*TSSYSS
Trigger: CGAGGAGTACGAGCTGGTGCAGGTCATCTCGGAGGA...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTCAGCATTCGGTCCCTTaGGACGGCAGCCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALQHSVP*DGSPSL
Trigger: AAGACTTGGGCTGCCGTCCCAAGGGACCGAATGCTG...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGTGCTCTTCCGAGGCTTaGGCGAGGTGGTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: FALSFLASLPKNMVICAMCSSEA*ARWCWR
Trigger: ACGCCAGCACCACCTCGCCCAAGCCTCGGAAGAGCA...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACACCAGAGCTCCCGCTaGCAGTGGACTTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPHQSSR*QWTWAA
Trigger: AGCAGCCCAAGTCCACTGCCAGCGGGAGCTCTGGTG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGACAAACAAGGGGCCACTaGTCCCTCCCTTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRQTRGH*SLPSEG
Trigger: ACCCTCTGAAGGGAGGGACCAGTGGCCCCTTGTTTG...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACAAATTGGAGGACTTCCTaGCCCGTTCTTCGGTCCATT +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTNWRTS*PVLRSI
Trigger: AATGGACCGAAGAACGGGCCAGGAAGTCCTCCAATT...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACATCCCATATTCGAACATaGTCTTCCACCAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTSHIRT*SSTSQC
Trigger: ACACTGGCTGGTGGAAGATCATGTTCGAATATGGGA...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR TCA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATCTTCTGAGAAGCACGTaGATTCTGCTGACTCTCCAC +
Preference number: 4 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNLLRST*ILLTLH
Trigger: GTGGAGAGTCAGCAGAATTCACGTGCTTCTCAGAAG...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGAGTTCGACTCGCAGGATaGCACGCTGACAGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRVRLAG*HADRVH
Trigger: ATGGACTCTGTCAGCGTGTCATCCTGCGAGTCGAAC...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATGTTCGACTCGCAGGATaGCACGCTGACAGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANVRLAG*HADRVH
Trigger: ATGGACTCTGTCAGCGTGTCATCCTGCGAGTCGAAC...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATCCTGGCTCGTCAACATaGTGCTCTTGTACATGTTGC +
Preference number: 4 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNPGSST*CSCTCC
Trigger: GCAACATGTACAAGAGCATCATGTTGACGAGCCAGG...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGACTTTGTCCTCCGAGATaGCCTGCACCAGCTCGTACT +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRLCPPR*PAPART
Trigger: AGTACGAGCTGGTGCAGGTCATCTCGGAGGACAAAG...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATCTTGTTTCAGGAGCTTaGCACCTCCAGAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYLVSGA*HLQRCH
Trigger: ATGACACCTCTGGAGGTGTCAAGCTCCTGAAACAAG...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACAATACTTCAACCTGCATaGGGGCTGCCACCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTILQPA*GLPPWP
Trigger: TGGCCAGGGTGGCAGCCCTCATGCAGGTTGAAGTAT...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCATACTTCAACCTGCATaGGGGCTGCCACCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCILQPA*GLPPWP
Trigger: TGGCCAGGGTGGCAGCCCTCATGCAGGTTGAAGTAT...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATATCGAGTTCAGGTTCTaGAGATCCCGTTGCGATGCT +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYIEFRF*RSRCDA
Trigger: AGCATCGCAACGGGATCTGCAGAACCTGAACTCGAT...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR GCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATCTCTCGGAAGTCTTCTaGACACTGGTCAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANLSEVF*TLVKPG
Trigger: GCCTGGCTTGACCAGTGTGCAGAAGACTTCCGAGAG...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTTGGTCTGGGGTCATaGAATAGCTGTTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYFGLGS*NSCCRQ
Trigger: CTGCCTGCAACAGCTATTGCATGACCCCAGACCAAA...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCTCCTCTGTCAGGAGCTaGTGCCTCTGGAACCACTGG +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCSSVRS*CLWNHW
Trigger: CCAGTGGTTCCAGAGGCAGCAGCTCCTGACAGAGGA...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCGCAGTGGACTTGGGCTaGTCTTTGGTGGGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCAVDLG*SLVGVG
Trigger: TCCCACTCCCACCAAAGAGCAGCCCAAGTCCACTGC...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCTCCTCCGAGATGACCTaGACCAGCTCGTACTCCTCG +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCSSEMT*TSSYSS
Trigger: CGAGGAGTACGAGCTGGTGCAGGTCATCTCGGAGGA...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCACATATACTTCAACCTaGATGAGGGCTGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTTYTST*MRAATL
Trigger: CAGGGTGGCAGCCCTCATGCAGGTTGAAGTATATGT...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTGTGCTCTTCTTTCTaGGTCAGAGCCCGGCATCAT +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYLCSSF*VRARHH
Trigger: ATGATGCCGGGCTCTGACCCAGAAAGAAGAGCACAA...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACACTCTGGGTACGCTTCTaGTTTTCTTTCACACTGCTG +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTLWVRF*FSFTLL
Trigger: CAGCAGTGTGAAAGAAAACCAGAAGCGTACCCAGAG...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATAGCTGCAGCCGCCTCTaGGTACGCTTCTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANSCSRL*VRFWFS
Trigger: AGAAAACCAGAAGCGTACCCAGAGGCGGCTGCAGCT...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACGCTGGCAGTGGACTTaGGCTGCTCTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPRWQWT*AALWWE
Trigger: CTCCCACCAAAGAGCAGCCCAAGTCCACTGCCAGCG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATTCCTCAGCCTCTGAGTaGTTCGACTCGCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANSSASE*FDSQDD
Trigger: GTCATCCTGCGAGTCGAACCACTCAGAGGCTGAGGA...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAGCCCCACTCTGCCTTTaGCAAACAAGGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPAPLCL*QTRGHW
Trigger: CCAGTGGCCCCTTGTTTGCCAAAGGCAGAGTGGGGC...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CAA 72 bp AATACACAGGATGAACACGGGCACAACATATATGTCTaGGTGGTCACGCCCTCAACCAGGCCAATGGTTTTA +
Preference number: 4 (lower is better)
Translates to: NTQDEHGHNIYV*VVTPSTRPMVL
Trigger: TAAAACCATTGGCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCTGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCAGGTTTCATATTGACTaGCTGTGTGTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTRFHID*LCVLEA
Trigger: TGCCTCCAGGACACACAGTCAGTCAATATGAAACCT...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCCGCAGGATGACACGCTaGCAGAGTCCATGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCRRMTR*QSPCFH
Trigger: GTGAAAGCATGGACTCTGTCAGCGTGTCATCCTGCG...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACATATTGTCTTCCACACTaGTGCGGATTATGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTYCLPH*CGLCRC
Trigger: ACACCTGCATAATCCGCATCAGTGTGGAAGACAATA...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAGATGCAGGCAGAGGTTaGAGGCCACCAGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPDAGRG*RPPAHP
Trigger: TGGATGAGCTGGTGGCCTTCAACCTCTGCCTGCATC...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACATACTCCTACCAACTaGAGGGCACTCGGTCCGGCA +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPHTPTN*RALGPA
Trigger: TGCCGGACCGAGTGCCCTGCAGTTGGTAGGAGTATG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR GCA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGCCCTTCGAGACCAAATaGAGCCCAGGCAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: FALSFLASLPKNMVICAMPFETK*SPGSGE
Trigger: CTCACCACTGCCTGGGCTGCATTTGGTCTCGAAGGG...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACACAATTAGAACGATGCTaGGCGCCCGGGTGTGCATCA +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTQLERC*APGCAS
Trigger: TGATGCACACCCGGGCGCCCAGCATCGTTCTAATTG...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR CCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACACACCCATGTCCTTCTaGAGCTGCAGCCGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNTPMSF*SCSRLW
Trigger: CCAGAGGCGGCTGCAGCTCCAGAAGGACATGGGTGT...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACATCCTCAGCCTCTGAGTaGTTCGACTCGCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTSSASE*FDSQDD
Trigger: GTCATCCTGCGAGTCGAACCACTCAGAGGCTGAGGA...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGAGATTGTGCTTCAGCATaGCTCTCTGGATCACAGCGG +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRDCASA*LSGSQR
Trigger: CCGCTGTGATCCAGAGAGCCATGCTGAAGCACAATC...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACATGGGCAACGTCAAGCTaGTCCGGCTACGCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTWATSS*SGYAVS
Trigger: TGAAACTGCGTAGCCGGACCAGCTTGACGTTGCCCA...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCAAGACCAAAGGAAATTaGAGGACTTCCTGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTKTKGN*RTSWPV
Trigger: AACGGGCCAGGAAGTCCTCCAATTTCCTTTGGTCTT...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACCGATGATAGGTCGTTaGCGGCTGCAGCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPPMIGR*RLQQKP
Trigger: TGGCTTTTGCTGCAGCCGTCAACGACCTATCATCGG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR TCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCCTGACAGATAAGATTTaGCCTTTCGACTCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTLTDKI*PFDSVL
Trigger: AAGGACGGAGTCGAAAGGTCAAATCTTATCTGTCAG...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR TCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATAATTTAGACACCTCTTaGGTAGGTTCTCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYNLDTS*VGSPTG
Trigger: ACCTGTGGGAGAACCTACTCAAGAGGTGTCTAAATT...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR TCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATTGGCAGCCTGTTaGATCTGGACTCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYLLAAC*IWTLLR
Trigger: CCTCAAAAGAGTCCAGATTCAACAGGCTGCCAATAA...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACATTACAGGTTTCATATTaGCTGACTGTGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTLQVSY*LTVCPG
Trigger: TCCAGGACACACAGTCAGTCAATATGAAACCTGTAA...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACACTTCCTCTTCCAGGCTaGAGGAGATCGTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTLPLPG*RRSCWE
Trigger: TTCCCAACACGATCTCCTTCAGCCTGGAAGAGGAAG...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTTGCCACGAGATCTTCTaGGAAGCACGTGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALCHEIF*EAREFC
Trigger: GCAGAATTCACGTGCTTCTCAGAAGATCTCGTGGCA...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCATTTTGGCTCTCTGCTaGGTTTTGAGTTCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTILALC*VLSSLP
Trigger: GGGCAAAGAACTCAAAACTCAGCAGAGAGCCAAAAT...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATATTTTGGCTCTCTGCTaGGTTTTGAGTTCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNILALC*VLSSLP
Trigger: GGGCAAAGAACTCAAAACTCAGCAGAGAGCCAAAAT...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATGCTTCAATCTCACATaGCAGGGCATAGCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRCFNLT*QGIALL
Trigger: GAGGAGAGCTATGCCCTGTCATGTGAGATTGAAGCA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTTGCTTCAATCTCACATaGCAGGGCATAGCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALCFNLT*QGIALL
Trigger: GAGGAGAGCTATGCCCTGTCATGTGAGATTGAAGCA...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTATTGTCTTCCACACTaGTGCGGATTATGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYYCLPH*CGLCRC
Trigger: ACACCTGCATAATCCGCATCAGTGTGGAAGACAATA...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATCCTCCCTTCAGAGGGTaGTTTTGCTGTGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANPPFRG*FCCVCY
Trigger: GTAACAGACACAGCAAAATCACCCTCTGAAGGGAGG...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCTGCCAGAAACTGAAATaGGCTTGTTTCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTCQKLK*ACFRSL
Trigger: CAAGCTCCTGAAACAAGCTCATTTCAGTTTCTGGCA...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACAAAGGCAATGAAGCAGTaGCATTCCAAGACAGATAAG +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTKAMKQ*HSKTDK
Trigger: CTTATCTGTCTTGGAATGTCACTGCTTCATTGCCTT...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATGGGTGTGCATCACTCTaGCTCATACTCCTACCAACT +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANGCASL*LILLPT
Trigger: AGTTGGTAGGAGTATGAGGCAGAGTGATGCACACCC...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR GCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACATTCTGCAGATCCCGTTaGGATGCTGTCACACAGCAC +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTFCRSR*DAVTQH
Trigger: GTGCTGTGTGACAGCATCGCAACGGGATCTGCAGAA...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR GCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCCCAGCCAGTGTCCCGTaGTTTCTACCTTGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCPASVP*FLPWWK
Trigger: TTTCCACCAAGGTAGAAAGCACGGGACACTGGCTGG...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR GCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATGGAATTAGACTGCAGTaGCGAAACGATGGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANGIRLQ*RNDGPQ
Trigger: TTGAGGGCCATCGTTTCGGCACTGCAGTCTAATTCC...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATTTGGTCTGGGGTCATaGAATAGCTGTTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRFGLGS*NSCCRQ
Trigger: CTGCCTGCAACAGCTATTGCATGACCCCAGACCAAA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATCTGAGTCCAGATTGTaGTTCAGCATGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRSESRL*FSMALW
Trigger: CCAGAGAGCCATGCTGAAGCACAATCTGGACTCAGA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGAACATATACTTCAACCTaGATGAGGGCTGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRTYTST*MRAATL
Trigger: CAGGGTGGCAGCCCTCATGCAGGTTGAAGTATATGT...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACACTTTCATACAGCCTGTaGCAGTTCCAGCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTLSYSL*QFQPLQ
Trigger: CTGCAGAGGCTGGAACTGCCACAGGCTGTATGAAAG...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACACCCTGGTGCTTCTTGTaGAATTCACATGGCTATTTA +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTPWCFL*NSHGYL
Trigger: TAAATAGCCATGTGAATTCCACAAGAAGCACCAGGG...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATACATATATGTCTTGGTaGTCACGCCCTCAACCAGGC +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANTYMSW*SRPQPG
Trigger: GCCTGGTTGAGGGCGTGACCACCAAGACATATATGT...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACACCGGCATCATCCGTGTaGGATAATCCAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTPASSV*DNPAVS
Trigger: AGAAACTGCTGGATTATCTCACACGGATGATGCCGG...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCTCTGGAACCACTGGATaGACTTTTGGTCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCSGTTG*TFGLGS
Trigger: TGACCCCAGACCAAAAGTTCATCCAGTGGTTCCAGA...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACACTCTATTCCCAGGACTaGTTCCATTTACTCAGAATA +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTLYSQD*FHLLRI
Trigger: TATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAG...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCCTTGTTTCAGGAGCTTaGCACCTCCAGAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCLVSGA*HLQRCH
Trigger: ATGACACCTCTGGAGGTGTCAAGCTCCTGAAACAAG...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCCCAAGAATATCAGGCTaGGGCTACATATACTTCAAC +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTPRISG*GYIYFN
Trigger: GTTGAAGTATATGTAGCCTCAGCCTGATATTCTTGG...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCGGAATTAGACTGCAGTaGCGAAACGATGGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCGIRLQ*RNDGPQ
Trigger: TTGAGGGCCATCGTTTCGGCACTGCAGTCTAATTCC...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACACCTATCATAATGCTTTaGACACCACAGGAACTCAAT +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTPIIML*TPQELN
Trigger: ATTGAGTTCCTGTGGTGTGCAAAGCATTATGATAGG...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACATCACATGGCTATTTATaGAACGCAAATCCCACACAA +
Preference number: 4 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTSHGYL*NANPTQ
Trigger: TTGTGTGGGATTTGCGTTGCATAAATAGCCATGTGA...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACTTGGGGACTTCCCGCTaGCCAAGAAGGGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNLGTSR*PRRVVP
Trigger: TGGAACTACCCTTCTTGGCCAGCGGGAAGTCCCCAA...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR CCA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATATCTTGCTCCTTTATTaGCAGCCTGTTGAATCTGGA +
Preference number: 4 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNILLLY*QPVESG
Trigger: TCCAGATTCAACAGGCTGCCAATAAAGGAGCAAGAT...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCGATGAACTTTTGGTCTaGGGTCATGCAATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTDELLV*GHAIAV
Trigger: AACAGCTATTGCATGACCCCAGACCAAAAGTTCATC...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCTGCCTCTGGAACCACTaGATGAACTTTTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCCLWNH*MNFWSG
Trigger: CCCAGACCAAAAGTTCATCCAGTGGTTCCAGAGGCA...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACAAGCGCTTGTGGATTTTaGGGTTGTTGTTGCAGGACG +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTSACGF*GCCCRT
Trigger: CGTCCTGCAACAACAACCCCAAAATCCACAAGCGCT...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAGCGCTTGTGGATTTTaGGGTTGTTGTTGCAGGACG +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCSACGF*GCCCRT
Trigger: CGTCCTGCAACAACAACCCCAAAATCCACAAGCGCT...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGAGAGACAGAGCGCTTGTaGATTTTGGGGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRETERL*ILGLLL
Trigger: CAACAACAACCCCAAAATCCACAAGCGCTCTGTCTC...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAGCGGGGGTTTTATCCTaGCTCGTCAACATGATGCTC +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPAGVLS*LVNMML
Trigger: GAGCATCATGTTGACGAGCCAGGATAAAACCCCCGC...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGGATTGTGCTTCAGCATaGCTCTCTGGATCACAGCGG +
Preference number: 4 (lower is better)
Translates to: FALSFLASLPKNMVICAMDCASA*LSGSQR
Trigger: CCGCTGTGATCCAGAGAGCCATGCTGAAGCACAATC...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTAAGCGATTGCATTCCTaGTCACCATTTTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALKRLHS*SPFWTL
Trigger: CAGAGTCCAAAATGGTGATCAGGAATGCAATCGCTT...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACCGGCATCATCCGTGTaGGATAATCCAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPPASSV*DNPAVS
Trigger: AGAAACTGCTGGATTATCTCACACGGATGATGCCGG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATGAGGCACTACTTTCTTaGAGAGTTGTGCATCCATGT +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANEALLS*RVVHPC
Trigger: ACATGGATGCACAACTCTTCAAGAAAGTAGTGCCTC...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCCTAGAAACAGTAGGCTaGGTCTCTTCACCATGCTCT +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCLETVG*VSSPCS
Trigger: AGAGCATGGTGAAGAGACTCAGCCTACTGTTTCTAG...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACTGGGAGTGGGACTGGTaGTCATGTCAGACCCTAGAA +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNWEWDW*SCQTLE
Trigger: TTCTAGGGTCTGACATGATCACCAGTCCCACTCCCA...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATTGCCAGAAACTGAAATaGGCTTGTTTCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANCQKLK*ACFRSL
Trigger: CAAGCTCCTGAAACAAGCTCATTTCAGTTTCTGGCA...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCGAAGAAAGTGCTTTTTaGCTAGTTGAAACCCAGTCA +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTEESAF*LVETQS
Trigger: TGACTGGGTTTCAACTAGTCAAAAAGCACTTTCTTC...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATTCATGCAATAGCTGTTaGAGGCAGACTGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANSCNSC*RQTVRA
Trigger: AGCTCTTACAGTCTGCCTGCAACAGCTATTGCATGA...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATCATGCAATAGCTGTTaGAGGCAGACTGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRSCNSC*RQTVRA
Trigger: AGCTCTTACAGTCTGCCTGCAACAGCTATTGCATGA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGTCTGAGTCCAGATTGTaGTTCAGCATGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FALSFLASLPKNMVICAMSESRL*FSMALW
Trigger: CCAGAGAGCCATGCTGAAGCACAATCTGGACTCAGA...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATTCACATGGCTATTTATaGAACGCAAATCCCACACAA +
Preference number: 4 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNSHGYL*NANPTQ
Trigger: TTGTGTGGGATTTGCGTTGCATAAATAGCCATGTGA...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCTCAGTAGTTCTCGGCTaGTCAAATGGTTATTATGGT +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTSVVLG*SNGYYG
Trigger: ACCATAATAACCATTTGACCAGCCGAGAACTACTGA...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAAGGAGCTGCTGCCTCTaGAACCACTGGATGAACTTT +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPRSCCL*NHWMNF
Trigger: AAAGTTCATCCAGTGGTTCCAGAGGCAGCAGCTCCT...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCGAGACAGAGCGCTTGTaGATTTTGGGGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCETERL*ILGLLL
Trigger: CAACAACAACCCCAAAATCCACAAGCGCTCTGTCTC...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAAATTGGAGGACTTCCTaGCCCGTTCTTCGGTCCATT +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPNWRTS*PVLRSI
Trigger: AATGGACCGAAGAACGGGCCAGGAAGTCCTCCAATT...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAAGACCAAAGGAAATTaGAGGACTTCCTGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCKTKGN*RTSWPV
Trigger: AACGGGCCAGGAAGTCCTCCAATTTCCTTTGGTCTT...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
3UTR CAA 72 bp CATTGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTaGTGGAATTCACATGGCTATTTATGCAACGCAAAT +
Preference number: 4 (lower is better)
Translates to: HCRKSLNFPWCF*WNSHGYLCNAN
Trigger: ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATCAGGTTTGCAAATTTTaGGGTTCCTTCCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANQVCKF*GSFLHQ
Trigger: CTGATGAAGGAAGGAACCTCAAAATTTGCAAACCTG...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACTCTGGAACCACTGGATaGACTTTTGGTCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNSGTTG*TFGLGS
Trigger: TGACCCCAGACCAAAAGTTCATCCAGTGGTTCCAGA...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCTCCCTTCAGAGGGTaGTTTTGCTGTGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNPPFRG*FCCVCY
Trigger: GTAACAGACACAGCAAAATCACCCTCTGAAGGGAGG...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATTATCTGGTGGCACTTaGTTGAGAAAGTCATCCTCT +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRLSGGT*LRKSSS
Trigger: AGAGGATGACTTTCTCAATCAAGTGCCACCAGATAA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAGGGGTTGCCAGAAACTaGAATGAGCTTGTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPGVARN*NELVSG
Trigger: TCCTGAAACAAGCTCATTTCAGTTTCTGGCAACCCC...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATAAAAGGACAACATTCTaGAAGTGCTTCTTACACATG +
Preference number: 4 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYKRTTF*KCFLHM
Trigger: CATGTGTAAGAAGCACTTTCAGAATGTTGTCCTTTT...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATGCTCTTGTACATGTTaGCGTTATTGTCTTCCACAC +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRCSCTC*RYCLPH
Trigger: GTGTGGAAGACAATAACGGCAACATGTACAAGAGCA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAACACCGGATGGTAATTaGAATCACCGCAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPTPDGN*NHRSLF
Trigger: AAACAGGCTGCGGTGATTGCAATTACCATCCGGTGT...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGACGTTCTTCGGTCCATTaGCGCAAATCTCTAAACTTT +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRRSSVH*RKSLNF
Trigger: AAAGTTTAGAGATTTGCGGCAATGGACCGAAGAACG...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACAAGTCTTCTGCACACTaGTCAAGCCAGGCCCTTAGT +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNKSSAH*SSQALS
Trigger: ACTAAGGGCCTGGCTTGACCAGTGTGCAGAAGACTT...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACGCAGTGCCGAAACGATaGCCCTCAAGGAGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNAVPKR*PSRRKN
Trigger: ATTTTTCCTCCTTGAGGGCCATCGTTTCGGCACTGC...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATCTCGGCTGGTCAAATaGTTATTATGGTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRSRLVK*LLWSEK
Trigger: CTTCTCAGACCATAATAACCATTTGACCAGCCGAGA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTTCTCGGCTGGTCAAATaGTTATTATGGTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALSRLVK*LLWSEK
Trigger: CTTCTCAGACCATAATAACCATTTGACCAGCCGAGA...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACTCTGGGTACGCTTCTaGTTTTCTTTCACACTGCTG +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPLWVRF*FSFTLL
Trigger: CAGCAGTGTGAAAGAAAACCAGAAGCGTACCCAGAG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTGATGAACTTTTGGTCTaGGGTCATGCAATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALDELLV*GHAIAV
Trigger: AACAGCTATTGCATGACCCCAGACCAAAAGTTCATC...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCTCACTTGTTCTTCCATaGAGTTCTTTTTGCGCAAAA +
Preference number: 4 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTSLVLP*SSFCAK
Trigger: TTTTGCGCAAAAAGAACTCCATGGAAGAACAAGTGA...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGAGTACTAAGATCCAGATaGCAAAAGACTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRVLRSR*QKTPDT
Trigger: TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTAC...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGGCTGTCACACAGCACTaGCAGATAAGATTTGACCTT +
Preference number: 4 (lower is better)
Translates to: FALSFLASLPKNMVICAMAVTQH*QIRFDL
Trigger: AAGGTCAAATCTTATCTGTCAGTGCTGTGTGACAGC...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR TCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCATTATTGGCAGCCTGTTaGATCTGGACTCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPLLAAC*IWTLLR
Trigger: CCTCAAAAGAGTCCAGATTCAACAGGCTGCCAATAA...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAAAGCGATTGCATTCCTaGTCACCATTTTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPKRLHS*SPFWTL
Trigger: CAGAGTCCAAAATGGTGATCAGGAATGCAATCGCTT...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATCCACTTCTTGCTTCTaGAACTGCTCAAGAAGATTT +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRSTSCF*NCSRRF
Trigger: AAATCTTCTTGAGCAGTTTCAGAAGCAAGAAGTGGA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAGAGGCACTACTTTCTTaGAGAGTTGTGCATCCATGT +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPEALLS*RVVHPC
Trigger: ACATGGATGCACAACTCTTCAAGAAAGTAGTGCCTC...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATAGTGTGATGGTGTTATaGGAGACAAAAGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANSVMVL*ETKVSL
Trigger: AAGTGACACTTTTGTCTCTCATAACACCATCACACT...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTTGCTTTTTGACTAGTTaGAACCCAGTCAGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALCFLTS*NPVSLY
Trigger: GTAAAGACTGACTGGGTTTCAACTAGTCAAAAAGCA...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACTCTTCACCCCAGTCCTaGATCGAGCTCATTTTAGCT +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNSSPQS*IELILA
Trigger: AGCTAAAATGAGCTCGATTCAGGACTGGGGTGAAGA...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360851.4
CDS-3UTR GCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCTGCTCTTGTACATGTTaGCGTTATTGTCTTCCACAC +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCCSCTC*RYCLPH
Trigger: GTGTGGAAGACAATAACGGCAACATGTACAAGAGCA...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATCTCCATGTTACAATCTaGACTTCATATTCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANLHVTI*TSYSGF
Trigger: AAACCCGGAATATGAAGTGCAGATTGTAACATGGAG...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTTCACTTGGCTGTTCATaGCATAAAAGACATTTGCTG +
Preference number: 4 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALSLGCS*HKRHLL
Trigger: CAGCAAATGTCTTTTATGCCATGAACAGCCAAGTGA...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCCCCTGGTGCTTCTTGTaGAATTCACATGGCTATTTA +
Preference number: 4 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCPWCFL*NSHGYL
Trigger: TAAATAGCCATGTGAATTCCACAAGAAGCACCAGGG...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATTCTCTAAACTTTCCCTaGTGCTTCTTGTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANSLNFP*CFLWNS
Trigger: TGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGA...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGACAACATATATGTCTTaGTGGTCACGCCCTCAACCA +
Preference number: 4 (lower is better)
Translates to: FALSFLASLPKNMVICAMTTYMS*WSRPQP
Trigger: TGGTTGAGGGCGTGACCACCAAGACATATATGTTGT...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGTTACAGGTTTCATATTaGCTGACTGTGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FALSFLASLPKNMVICAMLQVSY*LTVCPG
Trigger: TCCAGGACACACAGTCAGTCAATATGAAACCTGTAA...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTCAGCTTTTATGGTCCTaGTCTTACAGGTTTCATATT +
Preference number: 4 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALQLLWS*SYRFHI
Trigger: AATATGAAACCTGTAAGATCAGGACCATAAAAGCTG...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACAGGTTTGCAAATTTTaGGGTTCCTTCCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPQVCKF*GSFLHQ
Trigger: CTGATGAAGGAAGGAACCTCAAAATTTGCAAACCTG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGTTATCTGGTGGCACTTaGTTGAGAAAGTCATCCTCT +
Preference number: 4 (lower is better)
Translates to: FALSFLASLPKNMVICAMLSGGT*LRKSSS
Trigger: AGAGGATGACTTTCTCAATCAAGTGCCACCAGATAA...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACCAAGAATATCAGGCTaGGGCTACATATACTTCAAC +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPPRISG*GYIYFN
Trigger: GTTGAAGTATATGTAGCCTCAGCCTGATATTCTTGG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTTATAAATACACAGGATaGACACGGGCACAACATATA +
Preference number: 4 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALYKYTG*TRAQHI
Trigger: TATATGTTGTGCCCGTGTTCATCCTGTGTATTTATA...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATATAAATACACAGGATaGACACGGGCACAACATATA +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRYKYTG*TRAQHI
Trigger: TATATGTTGTGCCCGTGTTCATCCTGTGTATTTATA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACACCTATCATAATGCTTTaGACACCACAGGAACTCAAT +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTPIIML*TPQELN
Trigger: ATTGAGTTCCTGTGGTGTGCAAAGCATTATGATAGG...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATCAAACGTAGTCAATTaGAGTAGAAATTTCCACACC +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRSNVVN*SRNFHT
Trigger: GGTGTGGAAATTTCTACTGCAATTGACTACGTTTGA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTTCAAACGTAGTCAATTaGAGTAGAAATTTCCACACC +
Preference number: 4 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALSNVVN*SRNFHT
Trigger: GGTGTGGAAATTTCTACTGCAATTGACTACGTTTGA...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGAGTAAGTAAAATAGGATaGTGTTATCAGCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRVSKIG*CYQQGT
Trigger: TGTTCCCTGCTGATAACAGCATCCTATTTTACTTAC...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAATCTTGCTCCTTTATTaGCAGCCTGTTGAATCTGGA +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPILLLY*QPVESG
Trigger: TCCAGATTCAACAGGCTGCCAATAAAGGAGCAAGAT...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATTGCGCTTTCTTTTCTaGCTTCATTACCAAAGAACA +
Preference number: 4 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRLRFLF*LHYQRT
Trigger: TGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATCTTGTGGAATTCACATaGCTATTTATGCAACGCAAA +
Preference number: 4 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANLVEFT*LFMQRK
Trigger: TTTGCGTTGCATAAATAGCCATGTGAATTCCACAAG...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACATCTCTAAACTTTCCCTaGTGCTTCTTGTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTSLNFP*CFLWNS
Trigger: TGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGA...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACATGTAGTCCAATCTCCTaGAAAGACCAAAGGAAATTG +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTCSPIS*KDQRKL
Trigger: CAATTTCCTTTGGTCTTTCCAGGAGATTGGACTACA...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACACAACATATATGTCTTaGTGGTCACGCCCTCAACCA +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNTTYMS*WSRPQP
Trigger: TGGTTGAGGGCGTGACCACCAAGACATATATGTTGT...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACAATAAAAGACATTTGCTaGGTCTGGAATCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTIKDIC*VWNHKF
Trigger: GAACTTGTGATTCCAGACTCAGCAAATGTCTTTTAT...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACAAAAAGGACAACATTCTaGAAGTGCTTCTTACACATG +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTKRTTF*KCFLHM
Trigger: CATGTGTAAGAAGCACTTTCAGAATGTTGTCCTTTT...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAGAAGAAAGTGCTTTTTaGCTAGTTGAAACCCAGTCA +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPEESAF*LVETQS
Trigger: TGACTGGGTTTCAACTAGTCAAAAAGCACTTTCTTC...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCGTTCTTCGGTCCATTaGCGCAAATCTCTAAACTTT +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNRSSVH*RKSLNF
Trigger: AAAGTTTAGAGATTTGCGGCAATGGACCGAAGAACG...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACATCACTTGTTCTTCCATaGAGTTCTTTTTGCGCAAAA +
Preference number: 4 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTSLVLP*SSFCAK
Trigger: TTTTGCGCAAAAAGAACTCCATGGAAGAACAAGTGA...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGATAAAAGACATTTGCTaGGTCTGGAATCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: FALSFLASLPKNMVICAMIKDIC*VWNHKF
Trigger: GAACTTGTGATTCCAGACTCAGCAAATGTCTTTTAT...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCTCTATTCCCAGGACTaGTTCCATTTACTCAGAATA +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNLYSQD*FHLLRI
Trigger: TATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAG...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAGTAAGTAAAATAGGATaGTGTTATCAGCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPVSKIG*CYQQGT
Trigger: TGTTCCCTGCTGATAACAGCATCCTATTTTACTTAC...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACTGTAGTCCAATCTCCTaGAAAGACCAAAGGAAATTG +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNCSPIS*KDQRKL
Trigger: CAATTTCCTTTGGTCTTTCCAGGAGATTGGACTACA...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR TCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCAGCTTTTATGGTCCTaGTCTTACAGGTTTCATATT +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNQLLWS*SYRFHI
Trigger: AATATGAAACCTGTAAGATCAGGACCATAAAAGCTG...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR GCA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGACACATAGTTTTACATaGAAAAGGCAATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: FALSFLASLPKNMVICAMTHSFT*KRQSEK
Trigger: CTTCTCTGATTGCCTTTTGCATGTAAAACTATGTGT...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CCA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCTTGTGGAATTCACATaGCTATTTATGCAACGCAAA +
Preference number: 4 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNLVEFT*LFMQRK
Trigger: TTTGCGTTGCATAAATAGCCATGTGAATTCCACAAG...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS GCA 90 bp ATTCTCAGTTTTCTCTCCGGTGCGCGAACGCTGCATGATGCGCCCTaGTCGGAGGCCAACGCAATGTCTGCTGGGCTCAGCCCCGCGGCG +
Preference number: 5 (lower is better)
Translates to: ILSFLSGARTLHDAP*SEANAMSAGLSPAA
Trigger: CGCCGCGGGGCTGAGCCCAGCAGACATTGCGTTGGCCTCCGAGCAGGGCGCATCATGCAGCGTTCGCGCACCGGAGAGAAAACTGAGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360851.4
CDS GCA 90 bp CTCCGGCAATTAGAACGATGCTGGGCGCCCGGGTGTGCATCACTCTaGCTCATACTCCTACCAACTGCAGGGCACTCGGTCCGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: LRQLERCWAPGCASL*LILLPTAGHSVRQP
Trigger: TGGCTGCCGGACCGAGTGCCCTGCAGTTGGTAGGAGTATGAGGCAGAGTGATGCACACCCGGGCGCCCAGCATCGTTCTAATTGCCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS TCA 90 bp GTCCTCCGAGATGACCTGCACCAGCTCGTACTCCTCGGCGGGGTCTaGGTCCAGATTGTGCTTCAGCATGGCTCTCTGGATCACAGCGGG +
Preference number: 5 (lower is better)
Translates to: VLRDDLHQLVLLGGV*VQIVLQHGSLDHSG
Trigger: CCCGCTGTGATCCAGAGAGCCATGCTGAAGCACAATCTGGACTCAGACCCCGCCGAGGAGTACGAGCTGGTGCAGGTCATCTCGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS TCA 90 bp AGCCCTCCTCAGCCTCTGAGTGGTTCGACTCGCAGGATGACACGCTaGCAGAGTCCATGCTTTCACCAGAGCTCCCGCTGGCAGTGGACT +
Preference number: 5 (lower is better)
Translates to: SPPQPLSGSTRRMTR*QSPCFHQSSRWQWT
Trigger: AGTCCACTGCCAGCGGGAGCTCTGGTGAAAGCATGGACTCTGTCAGCGTGTCATCCTGCGAGTCGAACCACTCAGAGGCTGAGGAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS GCA 90 bp GAGGCAATGTCTCCGGCAATTAGAACGATGCTGGGCGCCCGGGTGTaGATCACTCTGCCTCATACTCCTACCAACTGCAGGGCACTCGGT +
Preference number: 5 (lower is better)
Translates to: EAMSPAIRTMLGARV*ITLPHTPTNCRALG
Trigger: ACCGAGTGCCCTGCAGTTGGTAGGAGTATGAGGCAGAGTGATGCACACCCGGGCGCCCAGCATCGTTCTAATTGCCGGAGACATTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS GCA 90 bp CCGCTGGCCAAGAAGGGTAGTTCCAATCCCAGGAAACGGGCTTCCTaGTCAGGAACGCAGCCTCTAGCAGCGCACAGTCTGAGGCAATGT +
Preference number: 5 (lower is better)
Translates to: PLAKKGSSNPRKRAS*SGTQPLAAHSLRQC
Trigger: ACATTGCCTCAGACTGTGCGCTGCTAGAGGCTGCGTTCCTGAGCAGGAAGCCCGTTTCCTGGGATTGGAACTACCCTTCTTGGCCAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS GCA 90 bp CTAGCAGCGCACAGTCTGAGGCAATGTCTCCGGCAATTAGAACGATaGTGGGCGCCCGGGTGTGCATCACTCTGCCTCATACTCCTACCA +
Preference number: 5 (lower is better)
Translates to: LAAHSLRQCLRQLER*WAPGCASLCLILLP
Trigger: TGGTAGGAGTATGAGGCAGAGTGATGCACACCCGGGCGCCCAGCATCGTTCTAATTGCCGGAGACATTGCCTCAGACTGTGCGCTGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS GCA 90 bp GAGTCCATGCTTTCACCAGAGCTCCCGCTGGCAGTGGACTTGGGCTaGTCTTTGGTGGGAGTGGGACTGGTGATCATGTCAGACCCTAGA +
Preference number: 5 (lower is better)
Translates to: ESMLSPELPLAVDLG*SLVGVGLVIMSDPR
Trigger: TCTAGGGTCTGACATGATCACCAGTCCCACTCCCACCAAAGAGCAGCCCAAGTCCACTGCCAGCGGGAGCTCTGGTGAAAGCATGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS GCA 90 bp CGGATGGTAATTGCAATCACCGCAGCCTGTTTCTCAGCCCCACTCTaGCTTTGGCAAACAAGGGGCCACTGGTCCCTCCCTTCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: RMVIAITAACFSAPL*LWQTRGHWSLPSEG
Trigger: ACCCTCTGAAGGGAGGGACCAGTGGCCCCTTGTTTGCCAAAGGCAGAGTGGGGCTGAGAAACAGGCTGCGGTGATTGCAATTACCATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CCA 90 bp GCAGCGCACAGTCTGAGGCAATGTCTCCGGCAATTAGAACGATGCTaGGCGCCCGGGTGTGCATCACTCTGCCTCATACTCCTACCAACT +
Preference number: 5 (lower is better)
Translates to: AAHSLRQCLRQLERC*APGCASLCLILLPT
Trigger: AGTTGGTAGGAGTATGAGGCAGAGTGATGCACACCCGGGCGCCCAGCATCGTTCTAATTGCCGGAGACATTGCCTCAGACTGTGCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS TCA 90 bp AAGCAATTTCATTCTCAGTTTTCTCTCCGGTGCGCGAACGCTGCATaGTGCGCCCTGCTCGGAGGCCAACGCAATGTCTGCTGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: KQFHSQFSLRCANAA*CALLGGQRNVCWAQ
Trigger: CTGAGCCCAGCAGACATTGCGTTGGCCTCCGAGCAGGGCGCATCATGCAGCGTTCGCGCACCGGAGAGAAAACTGAGAATGAAATTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360851.4
CDS GCA 90 bp AGTCCTGAAGGGCAGTGTCAAGCATGGTCAGGTCAGTCAGGAAGGTaGCCAGGTAGGGCACAGTTCCCTGCATCACACCCATGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SPEGQCQAWSGQSGR*PGRAQFPASHPCPS
Trigger: AGAAGGACATGGGTGTGATGCAGGGAACTGTGCCCTACCTGGGCACCTTCCTGACTGACCTGACCATGCTTGACACTGCCCTTCAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CCA 90 bp TCAGGGGTGTCCATGGGAGTAATGGAGCCCTCCTCAGCCTCTGAGTaGTTCGACTCGCAGGATGACACGCTGACAGAGTCCATGCTTTCA +
Preference number: 5 (lower is better)
Translates to: SGVSMGVMEPSSASE*FDSQDDTLTESMLS
Trigger: TGAAAGCATGGACTCTGTCAGCGTGTCATCCTGCGAGTCGAACCACTCAGAGGCTGAGGAGGGCTCCATTACTCCCATGGACACCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CCA 90 bp GTTCCCTGCATCACACCCATGTCCTTCTGGAGCTGCAGCCGCCTCTaGGTACGCTTCTGGTTTTCTTTCACACTGCTGTCCAGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: VPCITPMSFWSCSRL*VRFWFSFTLLSRFA
Trigger: TGCAAACCTGGACAGCAGTGTGAAAGAAAACCAGAAGCGTACCCAGAGGCGGCTGCAGCTCCAGAAGGACATGGGTGTGATGCAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS TCA 90 bp CAGATCCCGTTGCGATGCTGTCACACAGCACTGACAGATAAGATTTaGCCTTTCGACTCCGTCCTTGGGGACTTCCCGCTGGCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: QIPLRCCHTALTDKI*PFDSVLGDFPLAKK
Trigger: CTTCTTGGCCAGCGGGAAGTCCCCAAGGACGGAGTCGAAAGGTCAAATCTTATCTGTCAGTGCTGTGTGACAGCATCGCAACGGGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS CCA 90 bp CAGATAAGATTTGACCTTTCGACTCCGTCCTTGGGGACTTCCCGCTaGCCAAGAAGGGTAGTTCCAATCCCAGGAAACGGGCTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: QIRFDLSTPSLGTSR*PRRVVPIPGNGLPA
Trigger: AGCAGGAAGCCCGTTTCCTGGGATTGGAACTACCCTTCTTGGCCAGCGGGAAGTCCCCAAGGACGGAGTCGAAAGGTCAAATCTTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS CCA 90 bp GTAATTGCAATCACCGCAGCCTGTTTCTCAGCCCCACTCTGCCTTTaGCAAACAAGGGGCCACTGGTCCCTCCCTTCAGAGGGTGATTTT +
Preference number: 5 (lower is better)
Translates to: VIAITAACFSAPLCL*QTRGHWSLPSEGDF
Trigger: AAAATCACCCTCTGAAGGGAGGGACCAGTGGCCCCTTGTTTGCCAAAGGCAGAGTGGGGCTGAGAAACAGGCTGCGGTGATTGCAATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS TCA 90 bp GAGTTCAGGTTCTGCAGATCCCGTTGCGATGCTGTCACACAGCACTaGCAGATAAGATTTGACCTTTCGACTCCGTCCTTGGGGACTTCC +
Preference number: 5 (lower is better)
Translates to: EFRFCRSRCDAVTQH*QIRFDLSTPSLGTS
Trigger: GGAAGTCCCCAAGGACGGAGTCGAAAGGTCAAATCTTATCTGTCAGTGCTGTGTGACAGCATCGCAACGGGATCTGCAGAACCTGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR CAA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCCTTTCGACTCCGTCCTaGGGGACTTCCCGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTLSTPS*GTSRWP
Trigger: TGGCCAGCGGGAAGTCCCCAAGGACGGAGTCGAAAG...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS TCA 90 bp GATTTTGTGCTCTTCTTTCTGGGTCAGAGCCCGGCATCATCCGTGTaGGATAATCCAGCAGTTTCTGTAAGCAAGGGAAGTGAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: DFVLFFLGQSPASSV*DNPAVSVSKGSEGA
Trigger: AGCCCCCTCACTTCCCTTGCTTACAGAAACTGCTGGATTATCTCACACGGATGATGCCGGGCTCTGACCCAGAAAGAAGAGCACAAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATTCAGCATTCGGTCCCTaGGGACGGCAGCCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNSAFGP*GRQPKS
Trigger: AGACTTGGGCTGCCGTCCCAAGGGACCGAATGCTGA...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATATGCTCTTCCGAGGCTaGGGCGAGGTGGTGCTGGCG +
Preference number: 5 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANMLFRG*GEVVLA
Trigger: CGCCAGCACCACCTCGCCCAAGCCTCGGAAGAGCAT...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATAGCCCCACTCTGCCTTaGGCAAACAAGGGGCCACTG +
Preference number: 5 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNSPTLP*ANKGPL
Trigger: CAGTGGCCCCTTGTTTGCCAAAGGCAGAGTGGGGCT...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACAGGTTTCACCTCCATCTaGAAAGAGGCAGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTGFTSI*KEAGRR
Trigger: CCTCCTGCCTGCCTCTTTCAAGATGGAGGTGAAACC...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR CAA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACAATGCTCTTCCGAGGCTaGGGCGAGGTGGTGCTGGCG +
Preference number: 5 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTMLFRG*GEVVLA
Trigger: CGCCAGCACCACCTCGCCCAAGCCTCGGAAGAGCAT...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACAGAGCGCTTGTGGATTTaGGGGTTGTTGTTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTERLWI*GLLLQD
Trigger: GTCCTGCAACAACAACCCCAAAATCCACAAGCGCTC...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCGTCAACATGATGCTCTaGTACATGTTGCCGTTATTG +
Preference number: 5 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGVNMML*YMLPLL
Trigger: CAATAACGGCAACATGTACAAGAGCATCATGTTGAC...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGAAGCCCCACTCTGCCTTaGGCAAACAAGGGGCCACTG +
Preference number: 5 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRSPTLP*ANKGPL
Trigger: CAGTGGCCCCTTGTTTGCCAAAGGCAGAGTGGGGCT...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATCAACCCCTAGCCATCTaGCTCCTTTATTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYQPLAI*LLYWQP
Trigger: AGGCTGCCAATAAAGGAGCAAGATGGCTAGGGGTTG...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACAGTGTTGGGAAGCCCATaGTCAGTTTCCACTTCTTGC +
Preference number: 5 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTVLGSP*SVSTSC
Trigger: GCAAGAAGTGGAAACTGACAATGGGCTTCCCAACAC...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACACTGAAGGAGATCGTGTaGGGAAGCCCATTGTCAGTT +
Preference number: 5 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTLKEIV*GSPLSV
Trigger: AACTGACAATGGGCTTCCCAACACGATCTCCTTCAG...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACATCAGCATTCGGTCCCTaGGGACGGCAGCCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTSAFGP*GRQPKS
Trigger: AGACTTGGGCTGCCGTCCCAAGGGACCGAATGCTGA...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATTTGTGGATTTTGGGGTaGTTGTTGCAGGACGGAGGG +
Preference number: 5 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNLWILG*LLQDGG
Trigger: CCCTCCGTCCTGCAACAACAACCCCAAAATCCACAA...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCTTGTGGATTTTGGGGTaGTTGTTGCAGGACGGAGGG +
Preference number: 5 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTLWILG*LLQDGG
Trigger: CCCTCCGTCCTGCAACAACAACCCCAAAATCCACAA...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATACCGAGACAGAGCGCTaGTGGATTTTGGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNTETER*WILGLL
Trigger: CAACAACCCCAAAATCCACAAGCGCTCTGTCTCGGT...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACACCCGATGATAGGTCGTaGACGGCTGCAGCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTPDDRS*TAAAKA
Trigger: GGCTTTTGCTGCAGCCGTCAACGACCTATCATCGGG...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR CAA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACACTTCACAGTTTGGGCTaGTCAGGTTTCCATACCTGT +
Preference number: 5 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTLHSLG*SGFHTC
Trigger: ACAGGTATGGAAACCTGACAAGCCCAAACTGTGAAG...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATGTGTTGGGAAGCCCATaGTCAGTTTCCACTTCTTGC +
Preference number: 5 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYVLGSP*SVSTSC
Trigger: GCAAGAAGTGGAAACTGACAATGGGCTTCCCAACAC...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCCGGAAATACACGGGGTaGCCAGAAACTGAAATGAGC +
Preference number: 5 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTRKYTG*PETEMS
Trigger: GCTCATTTCAGTTTCTGGCAACCCCGTGTATTTCCG...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AGGATGAACACGGGCACAACATATATGTCTTGGTGGTCACGCCCTCAACCAGGCCACCTGAGGAATAAATaGCACATAATAAAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: RMNTGTTYMSWWSRPQPGHLRNK*HIIKRY
Trigger: GTACCTCTTTATTATGTGCAATTTATTCCTCAGGTG...GCCTGGTTGAGGGCGTGACCACCAAGACATATATGTTGTGCCCGTGTTCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCCACAACATATATGTCTaGGTGGTCACGCCCTCAACC +
Preference number: 5 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTHNIYV*VVTPST
Trigger: GGTTGAGGGCGTGACCACCAAGACATATATGTTGTG...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS TCA 90 bp GAGATCGTGTTGGGAAGCCCATTGTCAGTTTCCACTTCTTGCTTCTaGAACTGCTCAAGAAGATTTTGTGCTCTTCTTTCTGGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: EIVLGSPLSVSTSCF*NCSRRFCALLSGSE
Trigger: CTCTGACCCAGAAAGAAGAGCACAAAATCTTCTTGAGCAGTTTCAGAAGCAAGAAGTGGAAACTGACAATGGGCTTCCCAACACGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CCA 90 bp TTCTTGCTTCTGAAACTGCTCAAGAAGATTTTGTGCTCTTCTTTCTaGGTCAGAGCCCGGCATCATCCGTGTGAGATAATCCAGCAGTTT +
Preference number: 5 (lower is better)
Translates to: FLLLKLLKKILCSSF*VRARHHPCEIIQQF
Trigger: AAACTGCTGGATTATCTCACACGGATGATGCCGGGCTCTGACCCAGAAAGAAGAGCACAAAATCTTCTTGAGCAGTTTCAGAAGCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATCTTCACAGTTTGGGCTaGTCAGGTTTCCATACCTGT +
Preference number: 5 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYLHSLG*SGFHTC
Trigger: ACAGGTATGGAAACCTGACAAGCCCAAACTGTGAAG...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATACCGAGACAGAGCGCTaGTGGATTTTGGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANTETER*WILGLL
Trigger: CAACAACCCCAAAATCCACAAGCGCTCTGTCTCGGT...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCGGGTCTGAGTCCAGATaGTGCTTCAGCATGGCTCTC +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCGSESR*CFSMAL
Trigger: GAGAGCCATGCTGAAGCACAATCTGGACTCAGACCC...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCCTTCAGAGGGTGATTTaGCTGTGTCTGTTACTCCAG +
Preference number: 5 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTLQRVI*LCLLLQ
Trigger: CTGGAGTAACAGACACAGCAAAATCACCCTCTGAAG...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACAGAAACTGAAATGAGCTaGTTTCAGGAGCTTGACACC +
Preference number: 5 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTETEMS*FQELDT
Trigger: GGTGTCAAGCTCCTGAAACAAGCTCATTTCAGTTTC...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACATTTCCCTGGTGCTTCTaGTGGAATTCACATGGCTAT +
Preference number: 5 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTFPWCF*WNSHGY
Trigger: ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAA...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATCCGTTCTTCGGTCCATaGCCGCAAATCTCTAAACTT +
Preference number: 5 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNPFFGP*PQISKL
Trigger: AAGTTTAGAGATTTGCGGCAATGGACCGAAGAACGG...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAGTTCTGCAGATCCCGTaGCGATGCTGTCACACAGCA +
Preference number: 5 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPVLQIP*RCCHTA
Trigger: TGCTGTGTGACAGCATCGCAACGGGATCTGCAGAAC...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCCAACCCCTAGCCATCTaGCTCCTTTATTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCQPLAI*LLYWQP
Trigger: AGGCTGCCAATAAAGGAGCAAGATGGCTAGGGGTTG...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATCATCTTCTTCACAGTTaGGGCTTGTCAGGTTTCCAT +
Preference number: 5 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYHLLHS*GLSGFH
Trigger: ATGGAAACCTGACAAGCCCAAACTGTGAAGAAGATG...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATCTGCTCAAGAAGATTTaGTGCTCTTCTTTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNLLKKI*CSSFWV
Trigger: GACCCAGAAAGAAGAGCACAAAATCTTCTTGAGCAG...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACAGTCAACATGATGCTCTaGTACATGTTGCCGTTATTG +
Preference number: 5 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTVNMML*YMLPLL
Trigger: CAATAACGGCAACATGTACAAGAGCATCATGTTGAC...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGGGGTCTGAGTCCAGATaGTGCTTCAGCATGGCTCTC +
Preference number: 5 (lower is better)
Translates to: FALSFLASLPKNMVICAMGSESR*CFSMAL
Trigger: GAGAGCCATGCTGAAGCACAATCTGGACTCAGACCC...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTGGAATCACAAGTTCTTaGTCCTCCGAGATGACCTGC +
Preference number: 5 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALGITSS*SSEMTC
Trigger: GCAGGTCATCTCGGAGGACAAAGAACTTGTGATTCC...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCGCTTGTTTCAGGAGCTaGACACCTCCAGAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCACFRS*TPPEVS
Trigger: TGACACCTCTGGAGGTGTCAAGCTCCTGAAACAAGC...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATTTTATTGGCAGCCTGTaGAATCTGGACTCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNFIGSL*NLDSFE
Trigger: CTCAAAAGAGTCCAGATTCAACAGGCTGCCAATAAA...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCTTTATTGGCAGCCTGTaGAATCTGGACTCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTFIGSL*NLDSFE
Trigger: CTCAAAAGAGTCCAGATTCAACAGGCTGCCAATAAA...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTACTTTCTTGAAGAGTaGTGCATCCATGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYYFLEE*CIHVGQ
Trigger: CTGACCTACATGGATGCACAACTCTTCAAGAAAGTA...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTGGTGTCTTCATTCTGTaGGTTGTAAACAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALGVFIL*VVNRRQ
Trigger: CTGCCTCCTGTTTACAACCAACAGAATGAAGACACC...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATGGTGTCTTCATTCTGTaGGTTGTAAACAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANGVFIL*VVNRRQ
Trigger: CTGCCTCCTGTTTACAACCAACAGAATGAAGACACC...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATACATGTTGCCGTTATaGTCTTCCACACTGATGCGG +
Preference number: 5 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRYMLPL*SSTLMR
Trigger: CCGCATCAGTGTGGAAGACAATAACGGCAACATGTA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCGAGCAGCTAAAAGCATTACCCGGCTGTCCACCAGGAAACAAATTTAAGACAGAAGTCAAAGTTCACTaGGCTGTTCATGGCATAAAA +
Preference number: 5 (lower is better)
Translates to: CEQLKALPGCPPGNKFKTEVKVH*AVHGIK
Trigger: TTTTATGCCATGAACAGCCAAGTGAACTTTGACTTC...TGTCTTAAATTTGTTTCCTGGTGGACAGCCGGGTAATGCTTTTAGCTGCTCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATTTTATCTGGTGGCACTaGATTGAGAAAGTCATCCTC +
Preference number: 5 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNFIWWH*IEKVIL
Trigger: GAGGATGACTTTCTCAATCAAGTGCCACCAGATAAA...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACACGGAAATACACGGGGTaGCCAGAAACTGAAATGAGC +
Preference number: 5 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTRKYTG*PETEMS
Trigger: GCTCATTTCAGTTTCTGGCAACCCCGTGTATTTCCG...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACACACAACATATATGTCTaGGTGGTCACGCCCTCAACC +
Preference number: 5 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTHNIYV*VVTPST
Trigger: GGTTGAGGGCGTGACCACCAAGACATATATGTTGTG...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCGAATTTAGACACCTCTaGAGTAGGTTCTCCCACAGG +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCEFRHL*SRFSHR
Trigger: CCTGTGGGAGAACCTACTCAAGAGGTGTCTAAATTC...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR CAA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGACTTACAGGTTTCATATaGACTGACTGTGTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRLTGFI*TDCVSW
Trigger: CCAGGACACACAGTCAGTCAATATGAAACCTGTAAG...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTCATCTTCTTCACAGTTaGGGCTTGTCAGGTTTCCAT +
Preference number: 5 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALHLLHS*GLSGFH
Trigger: ATGGAAACCTGACAAGCCCAAACTGTGAAGAAGATG...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCCCACTGGATGAACTTTaGGTCTGGGGTCATGCAATA +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCPLDEL*VWGHAI
Trigger: TATTGCATGACCCCAGACCAAAAGTTCATCCAGTGG...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAGGAATCACAAGTTCTTaGTCCTCCGAGATGACCTGC +
Preference number: 5 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPGITSS*SSEMTC
Trigger: GCAGGTCATCTCGGAGGACAAAGAACTTGTGATTCC...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp GATTCAGATAATCTATACAGCCCCATCTCTTTCCCCACGACTAGGCACAGTAATGAAGTCAAAGTTCACTaGGCTGTTCATGGCATAAAA +
Preference number: 5 (lower is better)
Translates to: DSDNLYSPISFPTTRHSNEVKVH*AVHGIK
Trigger: TTTTATGCCATGAACAGCCAAGTGAACTTTGACTTC...ATTACTGTGCCTAGTCGTGGGGAAAGAGATGGGGCTGTATAGATTATCTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGCCGCAAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTCCATGGAGTTCTTTTaGCGCAAAATGAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: CRKSLNFPWCFLWNSHGYSMEFF*RKMKSK
Trigger: CTTTGACTTCATTTTGCGCAAAAAGAACTCCATGGA...ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTTGCGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCCTTCAGAGGGTGATTTaGCTGTGTCTGTTACTCCAG +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCLQRVI*LCLLLQ
Trigger: CTGGAGTAACAGACACAGCAAAATCACCCTCTGAAG...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AGTGACATTCCAAGACAGATAAGAGTCCAAATGAGTCACCATTCTTTTGCGCTTTTTCCCTGGTGCTTCTaGTGGAATTCACATGGCTAT +
Preference number: 5 (lower is better)
Translates to: SDIPRQIRVQMSHHSFALFPWCF*WNSHGY
Trigger: ATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAA...AAGCGCAAAAGAATGGTGACTCATTTGGACTCTTATCTGTCTTGGAATGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACACCGTTCTTCGGTCCATaGCCGCAAATCTCTAAACTT +
Preference number: 5 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTPFFGP*PQISKL
Trigger: AAGTTTAGAGATTTGCGGCAATGGACCGAAGAACGG...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCGTCAGTTTCCACTTCTaGCTTCTGAAACTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCVSFHF*LLKLLK
Trigger: CTTGAGCAGTTTCAGAAGCAAGAAGTGGAAACTGAC...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACAGTCAGTTTCCACTTCTaGCTTCTGAAACTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTVSFHF*LLKLLK
Trigger: CTTGAGCAGTTTCAGAAGCAAGAAGTGGAAACTGAC...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCTGAAGGAGATCGTGTaGGGAAGCCCATTGTCAGTT +
Preference number: 5 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNLKEIV*GSPLSV
Trigger: AACTGACAATGGGCTTCCCAACACGATCTCCTTCAG...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATCCAGGTTTGCAAATTTaGAGGTTCCTTCCTTCATCA +
Preference number: 5 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANPGLQI*RFLPSS
Trigger: TGATGAAGGAAGGAACCTCAAAATTTGCAAACCTGG...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGCCACTGGATGAACTTTaGGTCTGGGGTCATGCAATA +
Preference number: 5 (lower is better)
Translates to: FALSFLASLPKNMVICAMPLDEL*VWGHAI
Trigger: TATTGCATGACCCCAGACCAAAAGTTCATCCAGTGG...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGTACATGTTGCCGTTATaGTCTTCCACACTGATGCGG +
Preference number: 5 (lower is better)
Translates to: FALSFLASLPKNMVICAMYMLPL*SSTLMR
Trigger: CCGCATCAGTGTGGAAGACAATAACGGCAACATGTA...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATATGCTCTTGTACATGTaGCCGTTATTGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANMLLYM*PLLSST
Trigger: TGTGGAAGACAATAACGGCAACATGTACAAGAGCAT...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCGCCTATCATAATGCTTaGCACACCACAGGAACTCAA +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCAYHNA*HTTGTQ
Trigger: TTGAGTTCCTGTGGTGTGCAAAGCATTATGATAGGC...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATTTATCTGGTGGCACTaGATTGAGAAAGTCATCCTC +
Preference number: 5 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRFIWWH*IEKVIL
Trigger: GAGGATGACTTTCTCAATCAAGTGCCACCAGATAAA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCGAAACTGAAATGAGCTaGTTTCAGGAGCTTGACACC +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCETEMS*FQELDT
Trigger: GGTGTCAAGCTCCTGAAACAAGCTCATTTCAGTTTC...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TGTCAAATTCATTTCCAGTTTCCCCACGGTGCCTATCATAATGCTTTGCACACCCACCTGAGGAATAAATaGCACATAATAAAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: CQIHFQFPHGAYHNALHTHLRNK*HIIKRY
Trigger: GTACCTCTTTATTATGTGCAATTTATTCCTCAGGTG...GGTGTGCAAAGCATTATGATAGGCACCGTGGGGAAACTGGAAATGAATTTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCCCCGTGCTTTCTACCTaGGTGGAAAGTTTGAATTTA +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCPVLST*VESLNL
Trigger: TAAATTCAAACTTTCCACCAAGGTAGAAAGCACGGG...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCTTCCTGATCACCATTTaGGACTCTGATGAACTTTGG +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCFLITI*DSDELW
Trigger: CCAAAGTTCATCAGAGTCCAAAATGGTGATCAGGAA...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp ATTGCACATAATAAAGAGGTACTAAGATCCAGATGGCAAAAGACTCCAGACACATACTTTCTTGAAGAGTaGTGCATCCATGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: IAHNKEVLRSRWQKTPDTYFLEE*CIHVGQ
Trigger: CTGACCTACATGGATGCACAACTCTTCAAGAAAGTA...TGTGTCTGGAGTCTTTTGCCATCTGGATCTTAGTACCTCTTTATTATGTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCCCAGGTTTGCAAATTTaGAGGTTCCTTCCTTCATCA +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCPGLQI*RFLPSS
Trigger: TGATGAAGGAAGGAACCTCAAAATTTGCAAACCTGG...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp CAAAGGACACTCTCTATTCCCAGGACTGATTCCATTTACTCAGAATATACGAGATCCATGGAGTTCTTTTaGCGCAAAATGAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: QRTLSIPRTDSIYSEYTRSMEFF*RKMKSK
Trigger: CTTTGACTTCATTTTGCGCAAAAAGAACTCCATGGA...TCTCGTATATTCTGAGTAAATGGAATCAGTCCTGGGAATAGAGAGTGTCCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAGCTACGCAGTTTCACTaGTTCTTCCATGGAGTTCTT +
Preference number: 5 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPATQFH*FFHGVL
Trigger: AAGAACTCCATGGAAGAACAAGTGAAACTGCGTAGC...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp TTTGCGCTTTCTTTTCTGGCTTCATTACCAAAGAACATGGTTATTTGTGCAATGGCTACGCAGTTTCACTaGTTCTTCCATGGAGTTCTT +
Preference number: 5 (lower is better)
Translates to: FALSFLASLPKNMVICAMATQFH*FFHGVL
Trigger: AAGAACTCCATGGAAGAACAAGTGAAACTGCGTAGC...CATTGCACAAATAACCATGTTCTTTGGTAATGAAGCCAGAAAAGAAAGCGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCAACGCAAATGGCCATTGTGCAAATTaGTTTTTCCATAGTCCATAC +
Preference number: 5 (lower is better)
Translates to: NFPWCFLWNSHGYLCNANGHCAN*FFHSPY
Trigger: GTATGGACTATGGAAAAACAAATTTGCACAATGGCC...ATTTGCGTTGCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCCAACTTCCCAGGCCATaGTGCAAATTTGTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCQLPRP*CKFVFP
Trigger: TGGAAAAACAAATTTGCACAATGGCCTGGGAAGTTG...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCTTACAGGTTTCATATaGACTGACTGTGTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNLTGFI*TDCVSW
Trigger: CCAGGACACACAGTCAGTCAATATGAAACCTGTAAG...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACAACTTCCCAGGCCATaGTGCAAATTTGTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPQLPRP*CKFVFP
Trigger: TGGAAAAACAAATTTGCACAATGGCCTGGGAAGTTG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAATCTCTAAACTTTCCCTGGTGCTTCTTGTGGAATTCACATGGCTATTTATGCCGAGCTCATTTTAGCTaGCCAAAGCAATTTCATTCT +
Preference number: 5 (lower is better)
Translates to: KSLNFPWCFLWNSHGYLCRAHFS*PKQFHS
Trigger: AGAATGAAATTGCTTTGGCAAGCTAAAATGAGCTCG...GCATAAATAGCCATGTGAATTCCACAAGAAGCACCAGGGAAAGTTTAGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360851.4
CDS CCA 90 bp AATTTTGAGGTTCCTTCCTTCATCAGTAGTTCTCGGCTGGTCAAATaGTTATTATGGTCTGAGAAGATATCTGAAAGTTCTTCAAACATC +
Preference number: 5 (lower is better)
Translates to: NFEVPSFISSSRLVK*LLWSEKISESSSNI
Trigger: GATGTTTGAAGAACTTTCAGATATCTTCTCAGACCATAATAACCATTTGACCAGCCGAGAACTACTGATGAAGGAAGGAACCTCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACTTCCTGATCACCATTTaGGACTCTGATGAACTTTGG +
Preference number: 5 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNFLITI*DSDELW
Trigger: CCAAAGTTCATCAGAGTCCAAAATGGTGATCAGGAA...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACATGCTCTTGTACATGTaGCCGTTATTGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNMLLYM*PLLSST
Trigger: TGTGGAAGACAATAACGGCAACATGTACAAGAGCAT...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCAGGCCATTGTGCAAATTaGTTTTTCCATAGTCCATAC +
Preference number: 5 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPGHCAN*FFHSPY
Trigger: GTATGGACTATGGAAAAACAAATTTGCACAATGGCC...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp AAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCCCACAAATCGAACAGGGATaGAAAACAGAAGAAAGTGCT +
Preference number: 5 (lower is better)
Translates to: KCFLHMSIFHIWLLVQTPQIEQG*KTEESA
Trigger: AGCACTTTCTTCTGTTTTCAATCCCTGTTCGATTTG...TGGGGTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS-3UTR CAA 90 bp CTGAAAGTGCTTCTTACACATGTCAATATTCCACATATGGCTTTTAGTTCAAACCAAATCGAACAGGGATaGAAAACAGAAGAAAGTGCT +
Preference number: 5 (lower is better)
Translates to: LKVLLTHVNIPHMAFSSNQIEQG*KTEESA
Trigger: AGCACTTTCTTCTGTTTTCAATCCCTGTTCGATTTG...GTTTGAACTAAAAGCCATATGTGGAATATTGACATGTGTAAGAAGCACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS GCA 72 bp TTTCTCTCCGGTGCGCGAACGCTGCATGATGCGCCCTaGTCGGAGGCCAACGCAATGTCTGCTGGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: FLSGARTLHDAP*SEANAMSAGLS
Trigger: GCTGAGCCCAGCAGACATTGCGTTGGCCTCCGAGCAGGGCGCATCATGCAGCGTTCGCGCACCGGAGAGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360851.4
CDS CAA 72 bp CAGCCGGACCTTACGCAGGACCCCGATGATAGGTCGTaGACGGCTGCAGCAAAAGCCAAGGCCACCTGCCGC +
Preference number: 6 (lower is better)
Translates to: QPDLTQDPDDRS*TAAAKAKATCR
Trigger: GCGGCAGGTGGCCTTGGCTTTTGCTGCAGCCGTCAACGACCTATCATCGGGGTCCTGCGTAAGGTCCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS TCA 72 bp AGCCGGACCTTACGCAGGACCCCGATGATAGGTCGTTaGCGGCTGCAGCAAAAGCCAAGGCCACCTGCCGCT +
Preference number: 6 (lower is better)
Translates to: SRTLRRTPMIGR*RLQQKPRPPAA
Trigger: AGCGGCAGGTGGCCTTGGCTTTTGCTGCAGCCGTCAACGACCTATCATCGGGGTCCTGCGTAAGGTCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS GCA 72 bp CGGGTGTGCATCACTCTGCCTCATACTCCTACCAACTaGAGGGCACTCGGTCCGGCAGCCAGTCCATCCCAC +
Preference number: 6 (lower is better)
Translates to: RVCITLPHTPTN*RALGPAASPSH
Trigger: GTGGGATGGACTGGCTGCCGGACCGAGTGCCCTGCAGTTGGTAGGAGTATGAGGCAGAGTGATGCACACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS CAA 72 bp ACCAGCTCGTACTCCTCGGCGGGGTCTGAGTCCAGATaGTGCTTCAGCATGGCTCTCTGGATCACAGCGGGG +
Preference number: 6 (lower is better)
Translates to: TSSYSSAGSESR*CFSMALWITAG
Trigger: CCCCGCTGTGATCCAGAGAGCCATGCTGAAGCACAATCTGGACTCAGACCCCGCCGAGGAGTACGAGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS TCA 72 bp CATTCTCAGTTTTCTCTCCGGTGCGCGAACGCTGCATaGTGCGCCCTGCTCGGAGGCCAACGCAATGTCTGC +
Preference number: 6 (lower is better)
Translates to: HSQFSLRCANAA*CALLGGQRNVC
Trigger: GCAGACATTGCGTTGGCCTCCGAGCAGGGCGCATCATGCAGCGTTCGCGCACCGGAGAGAAAACTGAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360851.4
CDS GCA 72 bp TTAGAACGATGCTGGGCGCCCGGGTGTGCATCACTCTaGCTCATACTCCTACCAACTGCAGGGCACTCGGTC +
Preference number: 6 (lower is better)
Translates to: LERCWAPGCASL*LILLPTAGHSV
Trigger: GACCGAGTGCCCTGCAGTTGGTAGGAGTATGAGGCAGAGTGATGCACACCCGGGCGCCCAGCATCGTTCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS GCA 72 bp GGGCAGTGTCAAGCATGGTCAGGTCAGTCAGGAAGGTaGCCAGGTAGGGCACAGTTCCCTGCATCACACCCA +
Preference number: 6 (lower is better)
Translates to: GQCQAWSGQSGR*PGRAQFPASHP
Trigger: TGGGTGTGATGCAGGGAACTGTGCCCTACCTGGGCACCTTCCTGACTGACCTGACCATGCTTGACACTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS GCA 72 bp AGCTCGTACTCCTCGGCGGGGTCTGAGTCCAGATTGTaGTTCAGCATGGCTCTCTGGATCACAGCGGGGGTT +
Preference number: 6 (lower is better)
Translates to: SSYSSAGSESRL*FSMALWITAGV
Trigger: AACCCCCGCTGTGATCCAGAGAGCCATGCTGAAGCACAATCTGGACTCAGACCCCGCCGAGGAGTACGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CCA 72 bp TCACCATGCTCTTCCGAGGCTTGGGCGAGGTGGTGCTaGCGTCAGCAGCTGCTTCAATCTCACATGACAGGG +
Preference number: 6 (lower is better)
Translates to: SPCSSEAWARWC*RQQLLQSHMTG
Trigger: CCCTGTCATGTGAGATTGAAGCAGCTGCTGACGCCAGCACCACCTCGCCCAAGCCTCGGAAGAGCATGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CCA 72 bp ATCACCGCAGCCTGTTTCTCAGCCCCACTCTGCCTTTaGCAAACAAGGGGCCACTGGTCCCTCCCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: ITAACFSAPLCL*QTRGHWSLPSE
Trigger: CTCTGAAGGGAGGGACCAGTGGCCCCTTGTTTGCCAAAGGCAGAGTGGGGCTGAGAAACAGGCTGCGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS TCA 72 bp GGTGGTGCTGGCGTCAGCAGCTGCTTCAATCTCACATaGCAGGGCATAGCTCTCCTCCTCTGTCAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: GGAGVSSCFNLT*QGIALLLCQEL
Trigger: CAGCTCCTGACAGAGGAGGAGAGCTATGCCCTGTCATGTGAGATTGAAGCAGCTGCTGACGCCAGCACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS TCA 72 bp GATGACCTGCACCAGCTCGTACTCCTCGGCGGGGTCTaGGTCCAGATTGTGCTTCAGCATGGCTCTCTGGAT +
Preference number: 6 (lower is better)
Translates to: DDLHQLVLLGGV*VQIVLQHGSLD
Trigger: ATCCAGAGAGCCATGCTGAAGCACAATCTGGACTCAGACCCCGCCGAGGAGTACGAGCTGGTGCAGGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS GCA 72 bp TCTCCGGCAATTAGAACGATGCTGGGCGCCCGGGTGTaGATCACTCTGCCTCATACTCCTACCAACTGCAGG +
Preference number: 6 (lower is better)
Translates to: SPAIRTMLGARV*ITLPHTPTNCR
Trigger: CCTGCAGTTGGTAGGAGTATGAGGCAGAGTGATGCACACCCGGGCGCCCAGCATCGTTCTAATTGCCGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS CCA 72 bp TCCATGGGAGTAATGGAGCCCTCCTCAGCCTCTGAGTaGTTCGACTCGCAGGATGACACGCTGACAGAGTCC +
Preference number: 6 (lower is better)
Translates to: SMGVMEPSSASE*FDSQDDTLTES
Trigger: GGACTCTGTCAGCGTGTCATCCTGCGAGTCGAACCACTCAGAGGCTGAGGAGGGCTCCATTACTCCCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CAA 72 bp AATCACCGCAGCCTGTTTCTCAGCCCCACTCTGCCTTaGGCAAACAAGGGGCCACTGGTCCCTCCCTTCAGA +
Preference number: 6 (lower is better)
Translates to: NHRSLFLSPTLP*ANKGPLVPPFR
Trigger: TCTGAAGGGAGGGACCAGTGGCCCCTTGTTTGCCAAAGGCAGAGTGGGGCTGAGAAACAGGCTGCGGTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CAA 90 bp TTTGGCAAACAAGGGGCCACTGGTCCCTCCCTTCAGAGGGTGATTTaGCTGTGTCTGTTACTCCAGCAGCCCCGTTTAGCTGTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: FGKQGATGPSLQRVI*LCLLLQQPRLAVLG
Trigger: GCCCAGGACAGCTAAACGGGGCTGCTGGAGTAACAGACACAGCAAAATCACCCTCTGAAGGGAGGGACCAGTGGCCCCTTGTTTGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS TCA 72 bp CTGAGTCTGGAATCACAAGTTCTTTGTCCTCCGAGATaGCCTGCACCAGCTCGTACTCCTCGGCGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: LSLESQVLCPPR*PAPARTPRRGL
Trigger: CAGACCCCGCCGAGGAGTACGAGCTGGTGCAGGTCATCTCGGAGGACAAAGAACTTGTGATTCCAGACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS GCA 72 bp CACAGTCTGAGGCAATGTCTCCGGCAATTAGAACGATaGTGGGCGCCCGGGTGTGCATCACTCTGCCTCATA +
Preference number: 6 (lower is better)
Translates to: HSLRQCLRQLER*WAPGCASLCLI
Trigger: TATGAGGCAGAGTGATGCACACCCGGGCGCCCAGCATCGTTCTAATTGCCGGAGACATTGCCTCAGACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS GCA 72 bp AAGAAGGGTAGTTCCAATCCCAGGAAACGGGCTTCCTaGTCAGGAACGCAGCCTCTAGCAGCGCACAGTCTG +
Preference number: 6 (lower is better)
Translates to: KKGSSNPRKRAS*SGTQPLAAHSL
Trigger: CAGACTGTGCGCTGCTAGAGGCTGCGTTCCTGAGCAGGAAGCCCGTTTCCTGGGATTGGAACTACCCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS GCA 72 bp TCTTCACCATGCTCTTCCGAGGCTTGGGCGAGGTGGTaGTGGCGTCAGCAGCTGCTTCAATCTCACATGACA +
Preference number: 6 (lower is better)
Translates to: SSPCSSEAWARW*WRQQLLQSHMT
Trigger: TGTCATGTGAGATTGAAGCAGCTGCTGACGCCAGCACCACCTCGCCCAAGCCTCGGAAGAGCATGGTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CCA 72 bp AGTCTGAGGCAATGTCTCCGGCAATTAGAACGATGCTaGGCGCCCGGGTGTGCATCACTCTGCCTCATACTC +
Preference number: 6 (lower is better)
Translates to: SLRQCLRQLERC*APGCASLCLIL
Trigger: GAGTATGAGGCAGAGTGATGCACACCCGGGCGCCCAGCATCGTTCTAATTGCCGGAGACATTGCCTCAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS CCA 72 bp TTTGACCTTTCGACTCCGTCCTTGGGGACTTCCCGCTaGCCAAGAAGGGTAGTTCCAATCCCAGGAAACGGG +
Preference number: 6 (lower is better)
Translates to: FDLSTPSLGTSR*PRRVVPIPGNG
Trigger: CCCGTTTCCTGGGATTGGAACTACCCTTCTTGGCCAGCGGGAAGTCCCCAAGGACGGAGTCGAAAGGTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS CAA 72 bp GTAATGGACGTCACCGAGACAGAGCGCTTGTGGATTTaGGGGTTGTTGTTGCAGGACGGAGGGGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: VMDVTETERLWI*GLLLQDGGEER
Trigger: CCTCTCCTCCCCTCCGTCCTGCAACAACAACCCCAAAATCCACAAGCGCTCTGTCTCGGTGACGTCCATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CAA 90 bp ATGCTTTCACCAGAGCTCCCGCTGGCAGTGGACTTGGGCTGCTCTTaGGTGGGAGTGGGACTGGTGATCATGTCAGACCCTAGAAACAGT +
Preference number: 6 (lower is better)
Translates to: MLSPELPLAVDLGCS*VGVGLVIMSDPRNS
Trigger: ACTGTTTCTAGGGTCTGACATGATCACCAGTCCCACTCCCACCAAAGAGCAGCCCAAGTCCACTGCCAGCGGGAGCTCTGGTGAAAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS GCA 72 bp ATTTCATTCTCAGTTTTCTCTCCGGTGCGCGAACGCTaGATGATGCGCCCTGCTCGGAGGCCAACGCAATGT +
Preference number: 6 (lower is better)
Translates to: ISFSVFSPVRER*MMRPARRPTQC
Trigger: ACATTGCGTTGGCCTCCGAGCAGGGCGCATCATGCAGCGTTCGCGCACCGGAGAGAAAACTGAGAATGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360851.4
CDS CCA 72 bp ATCACACCCATGTCCTTCTGGAGCTGCAGCCGCCTCTaGGTACGCTTCTGGTTTTCTTTCACACTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: ITPMSFWSCSRL*VRFWFSFTLLS
Trigger: GGACAGCAGTGTGAAAGAAAACCAGAAGCGTACCCAGAGGCGGCTGCAGCTCCAGAAGGACATGGGTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CCA 72 bp GGGTCTGAGTCCAGATTGTGCTTCAGCATGGCTCTCTaGATCACAGCGGGGGTTTTATCCTGGCTCGTCAAC +
Preference number: 6 (lower is better)
Translates to: GSESRLCFSMAL*ITAGVLSWLVN
Trigger: GTTGACGAGCCAGGATAAAACCCCCGCTGTGATCCAGAGAGCCATGCTGAAGCACAATCTGGACTCAGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CAA 72 bp ACAGTCGAGGTAATGGACGTCACCGAGACAGAGCGCTaGTGGATTTTGGGGTTGTTGTTGCAGGACGGAGGG +
Preference number: 6 (lower is better)
Translates to: TVEVMDVTETER*WILGLLLQDGG
Trigger: CCCTCCGTCCTGCAACAACAACCCCAAAATCCACAAGCGCTCTGTCTCGGTGACGTCCATTACCTCGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CCA 72 bp TCCTTCTGGAGCTGCAGCCGCCTCTGGGTACGCTTCTaGTTTTCTTTCACACTGCTGTCCAGGTTTGCAAAT +
Preference number: 6 (lower is better)
Translates to: SFWSCSRLWVRF*FSFTLLSRFAN
Trigger: ATTTGCAAACCTGGACAGCAGTGTGAAAGAAAACCAGAAGCGTACCCAGAGGCGGCTGCAGCTCCAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CAA 90 bp CTCCAAGGTGCCAGCTTTTATGGTCCTGATCTTACAGGTTTCATATaGACTGACTGTGTGTCCTGGAGGCAGCTGGTCCCCTTCAACCCC +
Preference number: 6 (lower is better)
Translates to: LQGASFYGPDLTGFI*TDCVSWRQLVPFNP
Trigger: GGGGTTGAAGGGGACCAGCTGCCTCCAGGACACACAGTCAGTCAATATGAAACCTGTAAGATCAGGACCATAAAAGCTGGCACCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS TCA 72 bp TTCTGCAGATCCCGTTGCGATGCTGTCACACAGCACTaGCAGATAAGATTTGACCTTTCGACTCCGTCCTTG +
Preference number: 6 (lower is better)
Translates to: FCRSRCDAVTQH*QIRFDLSTPSL
Trigger: CAAGGACGGAGTCGAAAGGTCAAATCTTATCTGTCAGTGCTGTGTGACAGCATCGCAACGGGATCTGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS TCA 72 bp CTCTTCTTTCTGGGTCAGAGCCCGGCATCATCCGTGTaGGATAATCCAGCAGTTTCTGTAAGCAAGGGAAGT +
Preference number: 6 (lower is better)
Translates to: LFFLGQSPASSV*DNPAVSVSKGS
Trigger: ACTTCCCTTGCTTACAGAAACTGCTGGATTATCTCACACGGATGATGCCGGGCTCTGACCCAGAAAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CAA 72 bp GGCATTACGGATCGAGTTCAGGTTCTGCAGATCCCGTaGCGATGCTGTCACACAGCACTGACAGATAAGATT +
Preference number: 6 (lower is better)
Translates to: GITDRVQVLQIP*RCCHTALTDKI
Trigger: AATCTTATCTGTCAGTGCTGTGTGACAGCATCGCAACGGGATCTGCAGAACCTGAACTCGATCCGTAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS CAA 72 bp GGGCAACGTCAAGCTGGTCCGGCTACGCAGTTTCACTaGTTCTTCCATGGAGTTCTTTTTGCGCAAAATGAA +
Preference number: 6 (lower is better)
Translates to: GQRQAGPATQFH*FFHGVLFAQNE
Trigger: TTCATTTTGCGCAAAAAGAACTCCATGGAAGAACAAGTGAAACTGCGTAGCCGGACCAGCTTGACGTTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CAA 90 bp AGCTGTCCTGGGCAACGTCAAGCTGGTCCGGCTACGCAGTTTCACTaGTTCTTCCATGGAGTTCTTTTTGCGCAAAATGAAGTCAAAGTT +
Preference number: 6 (lower is better)
Translates to: SCPGQRQAGPATQFH*FFHGVLFAQNEVKV
Trigger: AACTTTGACTTCATTTTGCGCAAAAAGAACTCCATGGAAGAACAAGTGAAACTGCGTAGCCGGACCAGCTTGACGTTGCCCAGGACAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS TCA 72 bp CTCTCCTCTGTCTTTAAAACTTCCCATATTCGAACATaGTCTTCCACCAGCCAGTGTCCCGTGCTTTCTACC +
Preference number: 6 (lower is better)
Translates to: LSSVFKTSHIRT*SSTSQCPVLST
Trigger: GGTAGAAAGCACGGGACACTGGCTGGTGGAAGATCATGTTCGAATATGGGAAGTTTTAAAGACAGAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS TCA 72 bp ATGGTGCTGACAACACATTTGGTGAGGGTATTAAACTaGGAGATGGTGGCACGGATCGTAGGAGCCAAATGT +
Preference number: 6 (lower is better)
Translates to: MVLTTHLVRVLN*EMVARIVGAKC
Trigger: ACATTTGGCTCCTACGATCCGTGCCACCATCTCTCAGTTTAATACCCTCACCAAATGTGTTGTCAGCACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CCA 72 bp CTGAAACTGCTCAAGAAGATTTTGTGCTCTTCTTTCTaGGTCAGAGCCCGGCATCATCCGTGTGAGATAATC +
Preference number: 6 (lower is better)
Translates to: LKLLKKILCSSF*VRARHHPCEII
Trigger: GATTATCTCACACGGATGATGCCGGGCTCTGACCCAGAAAGAAGAGCACAAAATCTTCTTGAGCAGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CAA 72 bp CACACTGATGCGGATTATGCAGGTGTCTTCATTCTGTaGGTTGTAAACAGGAGGCAGCACAGTCGAGGTAAT +
Preference number: 6 (lower is better)
Translates to: HTDADYAGVFIL*VVNRRQHSRGN
Trigger: ATTACCTCGACTGTGCTGCCTCCTGTTTACAACCAACAGAATGAAGACACCTGCATAATCCGCATCAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS TCA 72 bp TCTACCTTGGTGGAAAGTTTGAATTTAGACACCTCTTaGGTAGGTTCTCCCACAGGTTTCACCTCCATCTTG +
Preference number: 6 (lower is better)
Translates to: STLVESLNLDTS*VGSPTGFTSIL
Trigger: CAAGATGGAGGTGAAACCTGTGGGAGAACCTACTCAAGAGGTGTCTAAATTCAAACTTTCCACCAAGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS CAA 72 bp GATCGTGTTGGGAAGCCCATTGTCAGTTTCCACTTCTaGCTTCTGAAACTGCTCAAGAAGATTTTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: DRVGKPIVSFHF*LLKLLKKILCS
Trigger: AGAGCACAAAATCTTCTTGAGCAGTTTCAGAAGCAAGAAGTGGAAACTGACAATGGGCTTCCCAACACGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CAA 72 bp TTCTACCTTGGTGGAAAGTTTGAATTTAGACACCTCTaGAGTAGGTTCTCCCACAGGTTTCACCTCCATCTT +
Preference number: 6 (lower is better)
Translates to: FYLGGKFEFRHL*SRFSHRFHLHL
Trigger: AAGATGGAGGTGAAACCTGTGGGAGAACCTACTCAAGAGGTGTCTAAATTCAAACTTTCCACCAAGGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304685.8
CDS CAA 72 bp CAAAGTTCACTTGGCTGTTCATGGCATAAAAGACATTaGCTGAGTCTGGAATCACAAGTTCTTTGTCCTCCG +
Preference number: 6 (lower is better)
Translates to: QSSLGCSWHKRH*LSLESQVLCPP
Trigger: CGGAGGACAAAGAACTTGTGATTCCAGACTCAGCAAATGTCTTTTATGCCATGAACAGCCAAGTGAACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS TCA 72 bp CAGCACTTCTTTAGTGGAGGCAAAGCCTCTGTACGTTaGAAGAAAGATGCTGATATAGGTAAAGTCATTGTC +
Preference number: 6 (lower is better)
Translates to: QHFFSGGKASVR*KKDADIGKVIV
Trigger: GACAATGACTTTACCTATATCAGCATCTTTCTTTCAACGTACAGAGGCTTTGCCTCCACTAAAGAAGTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS TCA 72 bp TTGGGAAGCCCATTGTCAGTTTCCACTTCTTGCTTCTaGAACTGCTCAAGAAGATTTTGTGCTCTTCTTTCT +
Preference number: 6 (lower is better)
Translates to: LGSPLSVSTSCF*NCSRRFCALLS
Trigger: AGAAAGAAGAGCACAAAATCTTCTTGAGCAGTTTCAGAAGCAAGAAGTGGAAACTGACAATGGGCTTCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CCA 72 bp GTTCCTTCCTTCATCAGTAGTTCTCGGCTGGTCAAATaGTTATTATGGTCTGAGAAGATATCTGAAAGTTCT +
Preference number: 6 (lower is better)
Translates to: VPSFISSSRLVK*LLWSEKISESS
Trigger: AGAACTTTCAGATATCTTCTCAGACCATAATAACCATTTGACCAGCCGAGAACTACTGATGAAGGAAGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4
CDS CCA 72 bp ATTTTGAGGTTCCTTCCTTCATCAGTAGTTCTCGGCTaGTCAAATGGTTATTATGGTCTGAGAAGATATCTG +
Preference number: 6 (lower is better)
Translates to: ILRFLPSSVVLG*SNGYYGLRRYL
Trigger: CAGATATCTTCTCAGACCATAATAACCATTTGACCAGCCGAGAACTACTGATGAAGGAAGGAACCTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304685.8
ENST00000360851.4