Pregenerated sensors for RFX8 (Homo sapiens)
Ensembl gene IDs: ENSG00000196460Ensembl transcript IDs: ENST00000428343.6, ENST00000481179.5, ENST00000484091.1, ENST00000492238.1, ENST00000646446.1, ENST00000646893.1
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCATGTTGCTCACACCCACGGGATATCGGCCCTGGCCCATGTGTGTaGGCATCACCCCCAGTGGCTCCATGCTGGGGCTGGCACACGCCT | + |
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Preference number: 1 (lower is better) Translates to: PCCSHPRDIGPGPCV*ASPPVAPCWGWHTP Trigger: AGGCGTGTGCCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAACATGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 90 bp | GGCCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTaGGGCTGGCACACGCCTGCGACAGTGAGGAATTCAGAGAATGGA | + |
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Preference number: 1 (lower is better) Translates to: GPGPCVWASPPVAPC*GWHTPATVRNSENG Trigger: TCCATTCTCTGAATTCCTCACTGTCGCAGGCGTGTGCCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 90 bp | AGGATCCTGAGGACCATGTTGCTCACACCCACGGGATATCGGCCCTaGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: RILRTMLLTPTGYRP*PMCVGITPSGSMLG Trigger: CCCCAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAACATGGTCCTCAGGATCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR TCA 90 bp | CCTGGTCTGGCTGGCCGAGAGTCGGGTCATCTGGTAGCATTTCCTTaGCAGTCCCCATGTCCTCCTCCTCCTCTTCCTCCTCTAGGCATG | + |
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Preference number: 1 (lower is better) Translates to: PGLAGRESGHLVAFP*QSPCPPPPLPPLGM Trigger: CATGCCTAGAGGAGGAAGAGGAGGAGGAGGACATGGGGACTGTCAAGGAAATGCTACCAGATGACCCGACTCTCGGCCAGCCAGACCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 90 bp | ATGCTGGGGCTGGCACACGCCTGCGACAGTGAGGAATTCAGAGAATaGAAAAGTGCCTGGTCTGGCTGGCCGAGAGTCGGGTCATCTGGT | + |
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Preference number: 1 (lower is better) Translates to: MLGLAHACDSEEFRE*KSAWSGWPRVGSSG Trigger: ACCAGATGACCCGACTCTCGGCCAGCCAGACCAGGCACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGTGTGCCAGCCCCAGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 90 bp | GCACACGCCTGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGCCTaGTCTGGCTGGCCGAGAGTCGGGTCATCTGGTAGCATTTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: AHACDSEEFREWKSA*SGWPRVGSSGSISL Trigger: CAAGGAAATGCTACCAGATGACCCGACTCTCGGCCAGCCAGACCAGGCACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 90 bp | TGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGCCTGGTCTGGCTaGCCGAGAGTCGGGTCATCTGGTAGCATTTCCTTGACAGTCCCC | + |
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Preference number: 1 (lower is better) Translates to: CDSEEFREWKSAWSG*PRVGSSGSISLTVP Trigger: GGGGACTGTCAAGGAAATGCTACCAGATGACCCGACTCTCGGCCAGCCAGACCAGGCACTTTTCCATTCTCTGAATTCCTCACTGTCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR TCA 90 bp | CTCCGGTCACTTGCCAGGGCTTTCTTAGAAGTAGCCAAAGTGCCTTaGTTGATGATGGCCTGTAGATCTGACTTCAAAACGCTGACACGC | + |
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Preference number: 1 (lower is better) Translates to: LRSLARAFLEVAKVP*LMMACRSDFKTLTR Trigger: GCGTGTCAGCGTTTTGAAGTCAGATCTACAGGCCATCATCAATCAAGGCACTTTGGCTACTTCTAAGAAAGCCCTGGCAAGTGACCGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR GCA 90 bp | CATCTCTGGGTTGTTCTCCAGTTCATCTGCGCCACTCCGGTCACTTaGCAGGGCTTTCTTAGAAGTAGCCAAAGTGCCTTGATTGATGAT | + |
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Preference number: 1 (lower is better) Translates to: HLWVVLQFICATPVT*QGFLRSSQSALIDD Trigger: ATCATCAATCAAGGCACTTTGGCTACTTCTAAGAAAGCCCTGGCAAGTGACCGGAGTGGCGCAGATGAACTGGAGAACAACCCAGAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 90 bp | GTCATGGCTTTGCTTACAGCAGTGAGAAGAAGATTCCATCTCAGCTaGAAGCTGGCGGCCAATTTGGTAAACTCTTCTTTGCTTCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: VMALLTAVRRRFHLS*KLAANLVNSSLLLL Trigger: AAGCAGAAGCAAAGAAGAGTTTACCAAATTGGCCGCCAGCTTCCAGCTGAGATGGAATCTTCTTCTCACTGCTGTAAGCAAAGCCATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 90 bp | AATACCATTCGCATAGTCTTTGAGTTTGGAGATCTGCAAGAGGGCTaGAACACCTTCCAAAGCATTAAGGAGCCACAGCTTAAATTTCTT | + |
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Preference number: 1 (lower is better) Translates to: NTIRIVFEFGDLQEG*NTFQSIKEPQLKFL Trigger: AAGAAATTTAAGCTGTGGCTCCTTAATGCTTTGGAAGGTGTTCCAGCCCTCTTGCAGATCTCCAAACTCAAAGACTATGCGAATGGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR GCA 90 bp | CAAGTTCTCAGTTCCTCACATTTCGTAAAATGTCTCGACAATAGTTaGAGTATTCGTCAGCAAGGAAGGCCATCATATTACAGGAGTATT | + |
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Preference number: 1 (lower is better) Translates to: QVLSSSHFVKCLDNS*SIRQQGRPSYYRSI Trigger: AATACTCCTGTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATTTTACGAAATGTGAGGAACTGAGAACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| 3UTR CAA 90 bp | CCCATGGCAGTGTCCACCAGGAAGCCCAGGATCCTGAGGACCATGTaGCTCACACCCACGGGATATCGGCCCTGGCCCATGTGTGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: PMAVSTRKPRILRTM*LTPTGYRPWPMCVG Trigger: GCCCACACACATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAACATGGTCCTCAGGATCCTGGGCTTCCTGGTGGACACTGCCATGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CAA 90 bp | GCCTGGTCTGGCTGGCCGAGAGTCGGGTCATCTGGTAGCATTTCCTaGACAGTCCCCATGTCCTCCTCCTCCTCTTCCTCCTCTAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: AWSGWPRVGSSGSIS*TVPMSSSSSSSSRH Trigger: ATGCCTAGAGGAGGAAGAGGAGGAGGAGGACATGGGGACTGTCAAGGAAATGCTACCAGATGACCCGACTCTCGGCCAGCCAGACCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR TCA 90 bp | GTTGCTCACACCCACGGGATATCGGCCCTGGCCCATGTGTGTGGGCATCACCCCAAATGCTTGGAGATGTaGAGACAGACAGCTGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: VAHTHGISALAHVCGHHPKCLEM*RQTAEE Trigger: TTCCTCAGCTGTCTGTCTTCACATCTCCAAGCATTT...GGGGTGATGCCCACACACATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR TCA 90 bp | GATCCTGAGGACCATGTTGCTCACACCCACGGGATATCGGCCCTGGCCCATGTGACACGCCTGCGACAGTaGGGAATTCAGAGAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: DPEDHVAHTHGISALAHVTRLRQ*GIQRME Trigger: TTCCATTCTCTGAATTCCTCACTGTCGCAGGCGTGT...CACATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAACATGGTCCTCAGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR TCA 90 bp | GGATATCGGCCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGCTTTGCTTACAGCAGTaGGAAGAAGATTCCATCTCA | + |
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Preference number: 2 (lower is better) Translates to: GYRPWPMCVGITPSGSMLLCLQQ*EEDSIS Trigger: TGAGATGGAATCTTCTTCTCACTGCTGTAAGCAAAG...CAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGGCCGATATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGGGCTGGCACACGCCTGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGGCCACTCCGGTCACTTaGCAGGGCTTTCTTAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: CWGWHTPATVRNSENGKVATPVT*QGFLRS Trigger: ACTTCTAAGAAAGCCCTGGCAAGTGACCGGAGTGGC...CACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGTGTGCCAGCCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR TCA 90 bp | AGCATTTCCTTGACAGTCCCCATGTCCTCCTCCTCCTCTTCCTCCTCTAGGCATGCACACGTCAGGCAATaGCATCAGCATGACTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SISLTVPMSSSSSSSSRHAHVRQ*HQHDCV Trigger: GACACAGTCATGCTGATGTCATTGCCTGACGTGTGC...ATGCCTAGAGGAGGAAGAGGAGGAGGAGGACATGGGGACTGTCAAGGAAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR CCA 90 bp | AGTTTAACTGCGCTTTCAGTGGTTTCATCTTCCAACAGCACCTGGATGAGCTTAGAAAAGTGCCTGGTCTaGCTGGCCGAGAGTCGGGTC | + |
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Preference number: 2 (lower is better) Translates to: SLTALSVVSSSNSTWMSLEKCLV*LAESRV Trigger: GACCCGACTCTCGGCCAGCCAGACCAGGCACTTTTC...TAAGCTCATCCAGGTGCTGTTGGAAGATGAAACCACTGAAAGCGCAGTTAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGCCGAGAGTCGGGTCATCTGGTAGCATTTCCTTGACAGTCCCCATGTCCACAGATTTCAGGTACTaGATAGAAACATCTTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GWPRVGSSGSISLTVPMSTDFRY*IETSSK Trigger: CTTGGAAGATGTTTCTATTCAGTACCTGAAATCTGT...GGACATGGGGACTGTCAAGGAAATGCTACCAGATGACCCGACTCTCGGCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR TCA 90 bp | CTTAAACATTTCATCTCTGGGTTGTTCTCCAGTTCATCTGCGCCACTCCGGTCAGCAATGACATCAGCATaGCTGTGTCTTGCTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LKHFISGLFSSSSAPLRSAMTSA*LCLAAE Trigger: CTCTGCAGCAAGACACAGTCATGCTGATGTCATTGC...TGACCGGAGTGGCGCAGATGAACTGGAGAACAACCCAGAGATGAAATGTTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR GCA 90 bp | AGTTTAACTGCGCTTTCAGTGGTTTCATCTTCCAACAGCACCTGGATGAGCTTAGTTCTCCAGTTCATCTaGGCCACTCCGGTCACTTGC | + |
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Preference number: 2 (lower is better) Translates to: SLTALSVVSSSNSTWMSLVLQFI*ATPVTC Trigger: GCAAGTGACCGGAGTGGCGCAGATGAACTGGAGAAC...TAAGCTCATCCAGGTGCTGTTGGAAGATGAAACCACTGAAAGCGCAGTTAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR GCA 90 bp | GAAGCTGGCGGCCAATTTGGTAAACTCTTCTTTGCTTCTGCTTGTCTGGAACACAGCATGACTGTGTCTTaGTGCAGAGACTTCCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: EAGGQFGKLFFASACLEHSMTVS*CRDFQK Trigger: CTTCTGGAAGTCTCTGCAGCAAGACACAGTCATGCT...GTGTTCCAGACAAGCAGAAGCAAAGAAGAGTTTACCAAATTGGCCGCCAGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR TCA 90 bp | TCCCCATGTCCTCCTCCTCCTCTTCCTCCTCTAGGCATGACTGAAGTATATGAACATTCGCATAGTCTTTaGGTTTGGAGATCTGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: SPCPPPPLPPLGMTEVYEHSHSL*VWRSAR Trigger: TCTTGCAGATCTCCAAACTCAAAGACTATGCGAATG...TTCATATACTTCAGTCATGCCTAGAGGAGGAAGAGGAGGAGGAGGACATGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR CCA 90 bp | TTTAACTGCGCTTTCAGTGGTTTCATCTTCCAACAGCACCTGGATGAGCTTATTGATCTGCAAGAGGGCTaGAACACCTTCCAAAGCATT | + |
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Preference number: 2 (lower is better) Translates to: FNCAFSGFIFQQHLDELIDLQEG*NTFQSI Trigger: AATGCTTTGGAAGGTGTTCCAGCCCTCTTGCAGATC...AATAAGCTCATCCAGGTGCTGTTGGAAGATGAAACCACTGAAAGCGCAGTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCATAGGAAGGCTGAGTTTAACTGCGCTTTCAGTGGTTTCATCTTCCAACTGGAACACAAATGCTTaGAGATGTGAAGACAGACAG | + |
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Preference number: 2 (lower is better) Translates to: CPIGRLSLTALSVVSSSNWNTNA*RCEDRQ Trigger: CTGTCTGTCTTCACATCTCCAAGCATTTGTGTTCCA...GTTGGAAGATGAAACCACTGAAAGCGCAGTTAAACTCAGCCTTCCTATGGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR TCA 90 bp | TTTAACTGCGCTTTCAGTGGTTTCATCTTCCAACAGCACCTGGATGAGCTTATTCTGACTTCAAAACGCTaGCACGCCTCTTACTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: FNCAFSGFIFQQHLDELILTSKR*HASYFS Trigger: TGAAAAGTAAGAGGCGTGTCAGCGTTTTGAAGTCAG...AATAAGCTCATCCAGGTGCTGTTGGAAGATGAAACCACTGAAAGCGCAGTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR TCA 90 bp | AATGTCTCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACAGAAATGGACATCTCCTaGATTCAGACAAAGGGGATC | + |
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Preference number: 2 (lower is better) Translates to: NVSTIVAVFVSKEGHHITEMDIS*IQTKGI Trigger: GATCCCCTTTGTCTGAATTCAGGAGATGTCCATTTC...TGTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| 3UTR-3UTR CCA 90 bp | AAATGTCTCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACTTCTTGCTCCAGAAATaGACATCTCCTGAATTCAGA | + |
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Preference number: 2 (lower is better) Translates to: KCLDNSCSIRQQGRPSYYFLLQK*TSPEFR Trigger: TCTGAATTCAGGAGATGTCCATTTCTGGAGCAAGAA...GTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| 3UTR CCA 72 bp | TCACACCCACGGGATATCGGCCCTGGCCCATGTGTGTaGGCATCACCCCCAGTGGCTCCATGCTGGGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SHPRDIGPGPCV*ASPPVAPCWGW Trigger: CCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGGCCGATATCCCGTGGGTGTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 72 bp | AGGACCATGTTGCTCACACCCACGGGATATCGGCCCTaGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: RTMLLTPTGYRP*PMCVGITPSGS Trigger: GGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAACATGGTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 72 bp | CCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTaGGGCTGGCACACGCCTGCGACAGTGAGGAATTCA | + |
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Preference number: 3 (lower is better) Translates to: PCVWASPPVAPC*GWHTPATVRNS Trigger: TGAATTCCTCACTGTCGCAGGCGTGTGCCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCCACACACATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 72 bp | GTGTGGGCATCACCCCCAGTGGCTCCATGCTGGGGCTaGCACACGCCTGCGACAGTGAGGAATTCAGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: VWASPPVAPCWG*HTPATVRNSEN Trigger: ATTCTCTGAATTCCTCACTGTCGCAGGCGTGTGCCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCCACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGGGGCTGGCATTGGTAAACTCTTCTTaGCTTCTGCTTGTCTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: PWPMCVGITPSGSMLGLALVNSS*LLLVWN Trigger: GTTCCAGACAAGCAGAAGCAAAGAAGAGTTTACCAA...TGCCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR CAA 90 bp | ATGGCAGTGTCCACCAGGAAGCCCAGGATCCTGAGGACCATGTTGCTCACACCCCAGCATGACTGTGTCTaGCTGCAGAGACTTCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: MAVSTRKPRILRTMLLTPQHDCV*LQRLPE Trigger: TTCTGGAAGTCTCTGCAGCAAGACACAGTCATGCTG...GGGTGTGAGCAACATGGTCCTCAGGATCCTGGGCTTCCTGGTGGACACTGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR CAA 90 bp | CCATGTTGCTCACACCCACGGGATATCGGCCCTGGCCCATGTGTGTGGGCATCACATTTCATCTCTGGGTaGTTCTCCAGTTCATCTGCG | + |
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Preference number: 3 (lower is better) Translates to: PCCSHPRDIGPGPCVWASHFISG*FSSSSA Trigger: CGCAGATGAACTGGAGAACAACCCAGAGATGAAATG...TGATGCCCACACACATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 72 bp | TGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGCCTaGTCTGGCTGGCCGAGAGTCGGGTCATCTGGTAGC | + |
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Preference number: 3 (lower is better) Translates to: CDSEEFREWKSA*SGWPRVGSSGS Trigger: GCTACCAGATGACCCGACTCTCGGCCAGCCAGACCAGGCACTTTTCCATTCTCTGAATTCCTCACTGTCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR GCA 72 bp | GTTGTTCTCCAGTTCATCTGCGCCACTCCGGTCACTTaGCAGGGCTTTCTTAGAAGTAGCCAAAGTGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: VVLQFICATPVT*QGFLRSSQSAL Trigger: CAAGGCACTTTGGCTACTTCTAAGAAAGCCCTGGCAAGTGACCGGAGTGGCGCAGATGAACTGGAGAACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 72 bp | GAGGAATTCAGAGAATGGAAAAGTGCCTGGTCTGGCTaGCCGAGAGTCGGGTCATCTGGTAGCATTTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: EEFREWKSAWSG*PRVGSSGSISL Trigger: CAAGGAAATGCTACCAGATGACCCGACTCTCGGCCAGCCAGACCAGGCACTTTTCCATTCTCTGAATTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR CAA 90 bp | ATTTCCTTGACAGTCCCCATGTCCTCCTCCTCCTCTTCCTCCTCTAGGCATGACCTTCTTTGCTTCTGCTaGTCTGGAACACAAATGCTT | + |
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Preference number: 3 (lower is better) Translates to: ISLTVPMSSSSSSSSRHDLLCFC*SGTQML Trigger: AAGCATTTGTGTTCCAGACAAGCAGAAGCAAAGAAG...GTCATGCCTAGAGGAGGAAGAGGAGGAGGAGGACATGGGGACTGTCAAGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 72 bp | CGCATAGTCTTTGAGTTTGGAGATCTGCAAGAGGGCTaGAACACCTTCCAAAGCATTAAGGAGCCACAGCTT | + |
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Preference number: 3 (lower is better) Translates to: RIVFEFGDLQEG*NTFQSIKEPQL Trigger: AAGCTGTGGCTCCTTAATGCTTTGGAAGGTGTTCCAGCCCTCTTGCAGATCTCCAAACTCAAAGACTATGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR-3UTR CAA 90 bp | TCCCCATGTCCTCCTCCTCCTCTTCCTCCTCTAGGCATGACTGAAGTATATGAAAAGCTGGCGGCCAATTaGGTAAACTCTTCTTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: SPCPPPPLPPLGMTEVYEKLAAN*VNSSLL Trigger: AAGCAAAGAAGAGTTTACCAAATTGGCCGCCAGCTT...TTCATATACTTCAGTCATGCCTAGAGGAGGAAGAGGAGGAGGAGGACATGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR TCA 72 bp | TCTTTGCCTGTTCTTGCTCCAGAAATGGACATCTCCTaGATTCAGACAAAGGGGATCCAACTGGGTCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: SLPVLAPEMDIS*IQTKGIQLGLS Trigger: AGACAGACCCAGTTGGATCCCCTTTGTCTGAATTCAGGAGATGTCCATTTCTGGAGCAAGAACAGGCAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| 3UTR TCA 72 bp | CTTGCCAGGGCTTTCTTAGAAGTAGCCAAAGTGCCTTaGTTGATGATGGCCTGTAGATCTGACTTCAAAACG | + |
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Preference number: 3 (lower is better) Translates to: LARAFLEVAKVP*LMMACRSDFKT Trigger: CGTTTTGAAGTCAGATCTACAGGCCATCATCAATCAAGGCACTTTGGCTACTTCTAAGAAAGCCCTGGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CCA 72 bp | TTGCTTACAGCAGTGAGAAGAAGATTCCATCTCAGCTaGAAGCTGGCGGCCAATTTGGTAAACTCTTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LLTAVRRRFHLS*KLAANLVNSSL Trigger: CAAAGAAGAGTTTACCAAATTGGCCGCCAGCTTCCAGCTGAGATGGAATCTTCTTCTCACTGCTGTAAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR GCA 72 bp | AGTTCCTCACATTTCGTAAAATGTCTCGACAATAGTTaGAGTATTCGTCAGCAAGGAAGGCCATCATATTAC | + |
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Preference number: 3 (lower is better) Translates to: SSSHFVKCLDNS*SIRQQGRPSYY Trigger: GTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATTTTACGAAATGTGAGGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR CCA 90 bp | CCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGGGGCTGGCACCTGGCCCATGTGTGTaGGCATCACCCCCAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PWPMCVGITPSGSMLGLAPGPCV*ASPPVA Trigger: AGCCACTGGGGGTGATGCCCACACACATGGGCCAGG...TGCCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | GTTGCTCACACCCACGGGATATCGGCCCTGGCCCATGTGTGTGGGCATCACCCCGCTCCATGCTGGGGCTaGCACACGCCTGCGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VAHTHGISALAHVCGHHPAPCWG*HTPATV Trigger: CACTGTCGCAGGCGTGTGCCAGCCCCAGCATGGAGC...GGGGTGATGCCCACACACATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | CCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGGGGCTGGCAGCGGTGTTGAGTCCGTaGGTGTCCTTGACTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PWPMCVGITPSGSMLGLAAVLSP*VSLTCL Trigger: CAAGCAAGTCAAGGACACCCACGGACTCAACACCGC...TGCCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | CCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGGGGCTGGCAGAATGGAAAAGTGCCTaGTCTGGCTGGCCGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PWPMCVGITPSGSMLGLAEWKSA*SGWPRV Trigger: GACTCTCGGCCAGCCAGACCAGGCACTTTTCCATTC...TGCCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| 3UTR CAA 72 bp | GTGTCCACCAGGAAGCCCAGGATCCTGAGGACCATGTaGCTCACACCCACGGGATATCGGCCCTGGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VSTRKPRILRTM*LTPTGYRPWPM Trigger: CATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAACATGGTCCTCAGGATCCTGGGCTTCCTGGTGGACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | GGATATCGGCCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGCGTAAATCTCATACATaGGACAGCGAGGGACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GYRPWPMCVGITPSGSMLRKSHT*DSEGRC Trigger: GCAGCGTCCCTCGCTGTCTCATGTATGAGATTTACG...CAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGGCCGATATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | ATGGCAGTGTCCACCAGGAAGCCCAGGATCCTGAGGACCATGTTGCTCACACCCGGAAGCCCAGGATCCTaGGGACCATGTTGCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: MAVSTRKPRILRTMLLTPGSPGS*GPCCSH Trigger: GTGTGAGCAACATGGTCCTCAGGATCCTGGGCTTCC...GGGTGTGAGCAACATGGTCCTCAGGATCCTGGGCTTCCTGGTGGACACTGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | GATCCTGAGGACCATGTTGCTCACACCCACGGGATATCGGCCCTGGCCCATGTGGACAGCGAGGGACGCTaGACTCTTCGCAAATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DPEDHVAHTHGISALAHVDSEGR*TLRKCR Trigger: TCTGCATTTGCGAAGAGTGCAGCGTCCCTCGCTGTC...CACATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAACATGGTCCTCAGGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | TGGAAAAGTGCCTGGTCTGGCTGGCCGAGAGTCGGGTCATCTGGTAGCATTTCCGAAAAGTGCCTGGTCTaGCTGGCCGAGAGTCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WKSAWSGWPRVGSSGSISEKCLV*LAESRV Trigger: GACCCGACTCTCGGCCAGCCAGACCAGGCACTTTTC...GGAAATGCTACCAGATGACCCGACTCTCGGCCAGCCAGACCAGGCACTTTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | GTTGCTCACACCCACGGGATATCGGCCCTGGCCCATGTGTGTGGGCATCACCCCTCTTCCAACAGCACCTaGATGAGCTTATTGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VAHTHGISALAHVCGHHPSSNST*MSLLPM Trigger: CATGGGCAATAAGCTCATCCAGGTGCTGTTGGAAGA...GGGGTGATGCCCACACACATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | TGGAAAAGTGCCTGGTCTGGCTGGCCGAGAGTCGGGTCATCTGGTAGCATTTCCGTTCTCCAGTTCATCTaGGCCACTCCGGTCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WKSAWSGWPRVGSSGSISVLQFI*ATPVTC Trigger: GCAAGTGACCGGAGTGGCGCAGATGAACTGGAGAAC...GGAAATGCTACCAGATGACCCGACTCTCGGCCAGCCAGACCAGGCACTTTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | ATTTCCTTGACAGTCCCCATGTCCTCCTCCTCCTCTTCCTCCTCTAGGCATGACTGCCCAGCCTCCGGGTaGCAAGGTCCGGAAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ISLTVPMSSSSSSSSRHDCPASG*QGPEKP Trigger: TGGTTTTTCCGGACCTTGGCACCCGGAGGCTGGGCA...GTCATGCCTAGAGGAGGAAGAGGAGGAGGAGGACATGGGGACTGTCAAGGAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | ATGGCAGTGTCCACCAGGAAGCCCAGGATCCTGAGGACCATGTTGCTCACACCCCAAAGGTGGCCGGGTTaGCTTGGTTCTCAGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MAVSTRKPRILRTMLLTPQRWPG*LGSQCF Trigger: AAAACACTGAGAACCAAGTCAACCCGGCCACCTTTG...GGGTGTGAGCAACATGGTCCTCAGGATCCTGGGCTTCCTGGTGGACACTGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
||
| CDS-3UTR TCA 90 bp | TGGAAAAGTGCCTGGTCTGGCTGGCCGAGAGTCGGGTCATCTGGTAGCATTTCCGCAATGACATCAGCATaGCTGTGTCTTGCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WKSAWSGWPRVGSSGSISAMTSA*LCLAAE Trigger: CTCTGCAGCAAGACACAGTCATGCTGATGTCATTGC...GGAAATGCTACCAGATGACCCGACTCTCGGCCAGCCAGACCAGGCACTTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | TGCTGGGGCTGGCACACGCCTGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGGCACACGTCAGGCAATaGCATCAGCATGACTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CWGWHTPATVRNSENGKVAHVRQ*HQHDCV Trigger: GACACAGTCATGCTGATGTCATTGCCTGACGTGTGC...CACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGTGTGCCAGCCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | GGATATCGGCCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGGCTTTGGGGTACATCTaGTATCTGAATCACAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: GYRPWPMCVGITPSGSMLALGYI*YLNHKL Trigger: CAATTTGTGATTCAGATATCAGATGTACCCCAAAGC...CAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGGCCGATATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | AGCATTTCCTTGACAGTCCCCATGTCCTCCTCCTCCTCTTCCTCCTCTAGGCATCAGAGAATGGAAAAGTaGCTGGTCTGGCTGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SISLTVPMSSSSSSSSRHQRMEK*LVWLAE Trigger: CTCGGCCAGCCAGACCAGGCACTTTTCCATTCTCTG...ATGCCTAGAGGAGGAAGAGGAGGAGGAGGACATGGGGACTGTCAAGGAAATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | CCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGGGGCTGGCAATGATCTTCACATGTTaGTTCTTGTTGGATAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: PWPMCVGITPSGSMLGLAMIFTC*FLLDNA Trigger: AGCATTATCCAACAAGAAGCAACATGTGAAGATCAT...TGCCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | ACGCCTGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGCCTGGTCTGGCTGGCGTGGCCGGGTTGACTTaGTTCTCAGTGTTTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPATVRNSENGKVPGLAGVAGLT*FSVFCP Trigger: TGGGCAAAACACTGAGAACCAAGTCAACCCGGCCAC...GCCAGCCAGACCAGGCACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | CCATGTTGCTCACACCCACGGGATATCGGCCCTGGCCCATGTGTGTGGGCATCAGTCTTCATCGGTGAATaGTCTTCACATGTTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PCCSHPRDIGPGPCVWASVFIGE*SSHVAS Trigger: AGAAGCAACATGTGAAGATCATTCACCGATGAAGAC...TGATGCCCACACACATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | GATCCTGAGGACCATGTTGCTCACACCCACGGGATATCGGCCCTGGCCCATGTGTTGCTTCTGCTTGTCTaGAACACAAATGCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DPEDHVAHTHGISALAHVLLLLV*NTNAWR Trigger: TCTCCAAGCATTTGTGTTCCAGACAAGCAGAAGCAA...CACATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAACATGGTCCTCAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | GTCACTTGCCAGGGCTTTCTTAGAAGTAGCCAAAGTGCCTTGATTGATGATGGCAGTGCCTGGTCTGGCTaGCCGAGAGTCGGGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VTCQGFLRSSQSALIDDGSAWSG*PRVGSS Trigger: AGATGACCCGACTCTCGGCCAGCCAGACCAGGCACT...GCCATCATCAATCAAGGCACTTTGGCTACTTCTAAGAAAGCCCTGGCAAGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | TCTGACTTCAAAACGCTGACACGCCTCTTACTTTTCAATACCATTCGCATAGTCGGGCATCACCCCCAGTaGCTCCATGCTGGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SDFKTLTRLLLFNTIRIVGHHPQ*LHAGAG Trigger: GCCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCC...GACTATGCGAATGGTATTGAAAAGTAAGAGGCGTGTCAGCGTTTTGAAGTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | TGGAAAAGTGCCTGGTCTGGCTGGCCGAGAGTCGGGTCATCTGGTAGCATTTCCTGCACTCTTCGCAAATaGAGAAGTTGTCGACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: WKSAWSGWPRVGSSGSISCTLRK*RSCRPT Trigger: TGTTGGTCGACAACTTCTGCATTTGCGAAGAGTGCA...GGAAATGCTACCAGATGACCCGACTCTCGGCCAGCCAGACCAGGCACTTTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | GAAGCTGGCGGCCAATTTGGTAAACTCTTCTTTGCTTCTGCTTGTCTGGAACACGGGCTGGCACACGCCTaGGACAGTGAGGAATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EAGGQFGKLFFASACLEHGLAHA*DSEEFR Trigger: TCTGAATTCCTCACTGTCGCAGGCGTGTGCCAGCCC...GTGTTCCAGACAAGCAGAAGCAAAGAAGAGTTTACCAAATTGGCCGCCAGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | ATGGCAGTGTCCACCAGGAAGCCCAGGATCCTGAGGACCATGTTGCTCACACCCTGGAACACAAATGCTTaGAGATGTGAAGACAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: MAVSTRKPRILRTMLLTPWNTNA*RCEDRQ Trigger: CTGTCTGTCTTCACATCTCCAAGCATTTGTGTTCCA...GGGTGTGAGCAACATGGTCCTCAGGATCCTGGGCTTCCTGGTGGACACTGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | TGCTGGGGCTGGCACACGCCTGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGGAAATGGACATCTCCTaGATTCAGACAAAGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: CWGWHTPATVRNSENGKVEMDIS*IQTKGI Trigger: GATCCCCTTTGTCTGAATTCAGGAGATGTCCATTTC...CACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGTGTGCCAGCCCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | TGCTGGGGCTGGCACACGCCTGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGAAATGCTTGGAGATGTaGAGACAGACAGCTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CWGWHTPATVRNSENGKVKCLEM*RQTAEE Trigger: TTCCTCAGCTGTCTGTCTTCACATCTCCAAGCATTT...CACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGTGTGCCAGCCCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | ATTTCCTTGACAGTCCCCATGTCCTCCTCCTCCTCTTCCTCCTCTAGGCATGACGATCTGCAAGAGGGCTaGAACACCTTCCAAAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: ISLTVPMSSSSSSSSRHDDLQEG*NTFQSI Trigger: AATGCTTTGGAAGGTGTTCCAGCCCTCTTGCAGATC...GTCATGCCTAGAGGAGGAAGAGGAGGAGGAGGACATGGGGACTGTCAAGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | TTTCATCTCTGGGTTGTTCTCCAGTTCATCTGCGCCACTCCGGTCACTTGCCAGCTGACTTCAAAACGCTaGCACGCCTCTTACTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FHLWVVLQFICATPVTCQLTSKR*HASYFS Trigger: TGAAAAGTAAGAGGCGTGTCAGCGTTTTGAAGTCAG...CTGGCAAGTGACCGGAGTGGCGCAGATGAACTGGAGAACAACCCAGAGATGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | TGCTGGGGCTGGCACACGCCTGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGCATTCGCATAGTCTTTaGGTTTGGAGATCTGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CWGWHTPATVRNSENGKVHSHSL*VWRSAR Trigger: TCTTGCAGATCTCCAAACTCAAAGACTATGCGAATG...CACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGTGTGCCAGCCCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | GAAGCTGGCGGCCAATTTGGTAAACTCTTCTTTGCTTCTGCTTGTCTGGAACACGCCACTCCGGTCACTTaGCAGGGCTTTCTTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EAGGQFGKLFFASACLEHATPVT*QGFLRS Trigger: ACTTCTAAGAAAGCCCTGGCAAGTGACCGGAGTGGC...GTGTTCCAGACAAGCAGAAGCAAAGAAGAGTTTACCAAATTGGCCGCCAGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | ACGCCTGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGCCTGGTCTGGCTGGCAAGGCTGAGTTTAACTaGGCTTTCAGTGGTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TPATVRNSENGKVPGLAGKAEFN*AFSGFI Trigger: GATGAAACCACTGAAAGCGCAGTTAAACTCAGCCTT...GCCAGCCAGACCAGGCACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | TTTAACTGCGCTTTCAGTGGTTTCATCTTCCAACAGCACCTGGATGAGCTTATTACGGGATATCGGCCCTaGCCCATGTGTGTGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FNCAFSGFIFQQHLDELITGYRP*PMCVGI Trigger: GATGCCCACACACATGGGCCAGGGCCGATATCCCGT...AATAAGCTCATCCAGGTGCTGTTGGAAGATGAAACCACTGAAAGCGCAGTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | ACTCCGGTCACTTGCCAGGGCTTTCTTAGAAGTAGCCAAAGTGCCTTGATTGATACACGCCTGCGACAGTaGGGAATTCAGAGAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPVTCQGFLRSSQSALIDTRLRQ*GIQRME Trigger: TTCCATTCTCTGAATTCCTCACTGTCGCAGGCGTGT...ATCAATCAAGGCACTTTGGCTACTTCTAAGAAAGCCCTGGCAAGTGACCGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | ACGCCTGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGCCTGGTCTGGCTGGCACAGGAGTATTTCTTTaGCTGTTCTTGCTCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPATVRNSENGKVPGLAGTGVFL*LFLLQK Trigger: TTTCTGGAGCAAGAACAGGCAAAGAAATACTCCTGT...GCCAGCCAGACCAGGCACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | TTTCATCTCTGGGTTGTTCTCCAGTTCATCTGCGCCACTCCGGTCACTTGCCAGTGTCTCGACAATAGTTaGAGTATTCGTCAGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FHLWVVLQFICATPVTCQCLDNS*SIRQQG Trigger: TCCTTGCTGACGAATACTGCAACTATTGTCGAGACA...CTGGCAAGTGACCGGAGTGGCGCAGATGAACTGGAGAACAACCCAGAGATGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | GACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACAGGAGTATTTGCCCAGCCTCCGGGTaGCAAGGTCCGGAAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: DNSCSIRQQGRPSYYRSICPASG*QGPEKP Trigger: TGGTTTTTCCGGACCTTGGCACCCGGAGGCTGGGCA...AATACTCCTGTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR GCA 90 bp | CTTAAACATTTCATCTCTGGGTTGTTCTCCAGTTCATCTGCGCCACTCCGGTCAAGCATGACTGTGTCTTaGTGCAGAGACTTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKHFISGLFSSSSAPLRSSMTVS*CRDFQK Trigger: CTTCTGGAAGTCTCTGCAGCAAGACACAGTCATGCT...TGACCGGAGTGGCGCAGATGAACTGGAGAACAACCCAGAGATGAAATGTTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | ATTTCCTTGACAGTCCCCATGTCCTCCTCCTCCTCTTCCTCCTCTAGGCATGACACAGATTTCAGGTACTaGATAGAAACATCTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLTVPMSSSSSSSSRHDTDFRY*IETSSK Trigger: CTTGGAAGATGTTTCTATTCAGTACCTGAAATCTGT...GTCATGCCTAGAGGAGGAAGAGGAGGAGGAGGACATGGGGACTGTCAAGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | ATTCGTCAGCAAGGAAGGCCATCATATTACAGGAGTATTTCTTTGCCTGTTCTTGACAGCGAGGGACGCTaGACTCTTCGCAAATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IRQQGRPSYYRSISLPVLDSEGR*TLRKCR Trigger: TCTGCATTTGCGAAGAGTGCAGCGTCCCTCGCTGTC...AAGAACAGGCAAAGAAATACTCCTGTAATATGATGGCCTTCCTTGCTGACGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR CCA 90 bp | AAATGTCTCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACGCGGTGTTGAGTCCGTaGGTGTCCTTGACTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KCLDNSCSIRQQGRPSYYAVLSP*VSLTCL Trigger: CAAGCAAGTCAAGGACACCCACGGACTCAACACCGC...GTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
||
| CDS-3UTR CCA 90 bp | TCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACAGGAGTAGTGGCCGGGTTGACTTaGTTCTCAGTGTTTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: STIVAVFVSKEGHHITGVVAGLT*FSVFCP Trigger: TGGGCAAAACACTGAGAACCAAGTCAACCCGGCCAC...TACTCCTGTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484091.1 |
||
| CDS-3UTR CCA 90 bp | ATGGCCTGTAGATCTGACTTCAAAACGCTGACACGCCTCTTACTTTTCAATACCAGATTCCATCTCAGCTaGAAGCTGGCGGCCAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: MACRSDFKTLTRLLLFNTRFHLS*KLAANL Trigger: CAAATTGGCCGCCAGCTTCCAGCTGAGATGGAATCT...GGTATTGAAAAGTAAGAGGCGTGTCAGCGTTTTGAAGTCAGATCTACAGGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
||
| 3UTR CAA 72 bp | AGCTGGAAGCTGGCGGCCAATTTGGTAAACTCTTCTTaGCTTCTGCTTGTCTGGAACACAAATGCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SWKLAANLVNSS*LLLVWNTNAWR Trigger: TCTCCAAGCATTTGTGTTCCAGACAAGCAGAAGCAAAGAAGAGTTTACCAAATTGGCCGCCAGCTTCCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
||
| 3UTR CAA 72 bp | AGAAGATTCCATCTCAGCTGGAAGCTGGCGGCCAATTaGGTAAACTCTTCTTTGCTTCTGCTTGTCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RRFHLSWKLAAN*VNSSLLLLVWN Trigger: GTTCCAGACAAGCAGAAGCAAAGAAGAGTTTACCAAATTGGCCGCCAGCTTCCAGCTGAGATGGAATCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | AATGTCTCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACACGTAAATCTCATACATaGGACAGCGAGGGACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NVSTIVAVFVSKEGHHITRKSHT*DSEGRC Trigger: GCAGCGTCCCTCGCTGTCTCATGTATGAGATTTACG...TGTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR TCA 90 bp | AGTTTAACTGCGCTTTCAGTGGTTTCATCTTCCAACAGCACCTGGATGAGCTTAGTAGCCAAAGTGCCTTaGTTGATGATGGCCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLTALSVVSSSNSTWMSLVAKVP*LMMACR Trigger: TCTACAGGCCATCATCAATCAAGGCACTTTGGCTAC...TAAGCTCATCCAGGTGCTGTTGGAAGATGAAACCACTGAAAGCGCAGTTAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | AAATGTCTCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACCAAAGGTGGCCGGGTTaGCTTGGTTCTCAGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KCLDNSCSIRQQGRPSYYQRWPG*LGSQCF Trigger: AAAACACTGAGAACCAAGTCAACCCGGCCACCTTTG...GTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR TCA 90 bp | TGTCCCATAGGAAGGCTGAGTTTAACTGCGCTTTCAGTGGTTTCATCTTCCAACCTTTGCTTACAGCAGTaGGAAGAAGATTCCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CPIGRLSLTALSVVSSSNLCLQQ*EEDSIS Trigger: TGAGATGGAATCTTCTTCTCACTGCTGTAAGCAAAG...GTTGGAAGATGAAACCACTGAAAGCGCAGTTAAACTCAGCCTTCCTATGGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | ACTCCGGTCACTTGCCAGGGCTTTCTTAGAAGTAGCCAAAGTGCCTTGATTGATACTCTTCTTTGCTTCTaGTTGTCTGGAACACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: TPVTCQGFLRSSQSALIDTLLCF*LSGTQM Trigger: CATTTGTGTTCCAGACAAGCAGAAGCAAAGAAGAGT...ATCAATCAAGGCACTTTGGCTACTTCTAAGAAAGCCCTGGCAAGTGACCGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | TTTAACTGCGCTTTCAGTGGTTTCATCTTCCAACAGCACCTGGATGAGCTTATTGAGGAATTCAGAGAATaGAAAAGTGCCTGGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FNCAFSGFIFQQHLDELIEEFRE*KSAWSG Trigger: GCCAGACCAGGCACTTTTCCATTCTCTGAATTCCTC...AATAAGCTCATCCAGGTGCTGTTGGAAGATGAAACCACTGAAAGCGCAGTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR GCA 90 bp | TCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACAGGAGTATGCACTCTTCGCAAATaGAGAAGTTGTCGACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: STIVAVFVSKEGHHITGVCTLRK*RSCRPT Trigger: TGTTGGTCGACAACTTCTGCATTTGCGAAGAGTGCA...TACTCCTGTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR CCA 90 bp | AACATCCTCAATTCCCTTGTACAGCTGGACGTCGTAGCATTTAAAGAGCTGGCATTCTTGCTCCAGAAATaGACATCTCCTGAATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NILNSLVQLDVVAFKELAFLLQK*TSPEFR Trigger: TCTGAATTCAGGAGATGTCCATTTCTGGAGCAAGAA...TGCCAGCTCTTTAAATGCTACGACGTCCAGCTGTACAAGGGAATTGAGGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CCA 90 bp | TGTCCCATAGGAAGGCTGAGTTTAACTGCGCTTTCAGTGGTTTCATCTTCCAACATTTTTCAAAGGCAATaGCATCTCCACTGTGATACC | + |
|
Preference number: 4 (lower is better) Translates to: CPIGRLSLTALSVVSSSNIFQRQ*HLHCDT Trigger: GGTATCACAGTGGAGATGCCATTGCCTTTGAAAAAT...GTTGGAAGATGAAACCACTGAAAGCGCAGTTAAACTCAGCCTTCCTATGGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR TCA 90 bp | AATGTCTCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACAGTCTTCATCGGTGAATaGTCTTCACACTGTGATACC | + |
|
Preference number: 4 (lower is better) Translates to: NVSTIVAVFVSKEGHHITVFIGE*SSHCDT Trigger: GGTATCACAGTGTGAAGATCATTCACCGATGAAGAC...TGTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR GCA 90 bp | ATTCGTCAGCAAGGAAGGCCATCATATTACAGGAGTATTTCTTTGCCTGTTCTTTGTCTCGACAATAGTTaGAGTATTCGTCAGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IRQQGRPSYYRSISLPVLCLDNS*SIRQQG Trigger: TCCTTGCTGACGAATACTGCAACTATTGTCGAGACA...AAGAACAGGCAAAGAAATACTCCTGTAATATGATGGCCTTCCTTGCTGACGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR TCA 90 bp | TTTAACTGCGCTTTCAGTGGTTTCATCTTCCAACAGCACCTGGATGAGCTTATTGGTACATCTGATATCTaGATCACAAATTGTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FNCAFSGFIFQQHLDELIGTSDI*ITNCCP Trigger: TGGACAACAATTTGTGATTCAGATATCAGATGTACC...AATAAGCTCATCCAGGTGCTGTTGGAAGATGAAACCACTGAAAGCGCAGTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS CCA 90 bp | CGGCCCCGGGCCTGCAGCACCGAGGCAGGCAGCGAGCGGCGGCCGTaGGCGGCGCTGGGTTGCACCGGTCCTGCTACCGCCGCTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPRACSTEAGSERRP*AALGCTGPATAAPR Trigger: CCGAGGAGCGGCGGTAGCAGGACCGGTGCAACCCAGCGCCGCCCACGGCCGCCGCTCGCTGCCTGCCTCGGTGCTGCAGGCCCGGGGCCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646893.1 |
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| CDS CCA 90 bp | GGCTACCCTCGCCGCTCGACGGCGAGGCCGGCACCCCCTCGGCCATaGCTCGGCCCCGGGCCTGCAGCACCGAGGCAGGCAGCGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GYPRRSTARPAPPRP*LGPGPAAPRQAASG Trigger: GCCGCTCGCTGCCTGCCTCGGTGCTGCAGGCCCGGGGCCGAGCCATGGCCGAGGGGGTGCCGGCCTCGCCGTCGAGCGGCGAGGGTAGCC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646893.1 |
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| CDS CCA 90 bp | CCTGCAGCACCGAGGCAGGCAGCGAGCGGCGGCCGTGGGCGGCGCTaGGTTGCACCGGTCCTGCTACCGCCGCTCCTCGGTGTTTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: PAAPRQAASGGRGRR*VAPVLLPPLLGVYF Trigger: AAAGTAAACACCGAGGAGCGGCGGTAGCAGGACCGGTGCAACCCAGCGCCGCCCACGGCCGCCGCTCGCTGCCTGCCTCGGTGCTGCAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646893.1 |
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| CDS GCA 90 bp | AGGCAGCGAGCGGCGGCCGTGGGCGGCGCTGGGTTGCACCGGTCCTaGTACCGCCGCTCCTCGGTGTTTACTTTAGAAAGGAGCGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RQRAAAVGGAGLHRS*YRRSSVFTLERSAR Trigger: CCGCGCGCTCCTTTCTAAAGTAAACACCGAGGAGCGGCGGTAGCAGGACCGGTGCAACCCAGCGCCGCCCACGGCCGCCGCTCGCTGCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646893.1 |
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| CDS TCA 90 bp | TGTCTGACATCACCAGGCTGTGGTACCACCGCCGCCGGCTCCCTGTaGACCCGCTCGCCGCCAGCGCGGTGCAGCCTGGAAGACGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: CLTSPGCGTTAAGSL*TRSPPARCSLEDEP Trigger: AGGTTCGTCTTCCAGGCTGCACCGCGCTGGCGGCGAGCGGGTTCACAGGGAGCCGGCGGCGGTGGTACCACAGCCTGGTGATGTCAGACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492238.1 |
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| CDS CCA 90 bp | GAGACCCCTCTGAAAGAACCACTGGTGTCTGACATCACCAGGCTGTaGTACCACCGCCGCCGGCTCCCTGTGAACCCGCTCGCCGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ETPLKEPLVSDITRL*YHRRRLPVNPLAAS Trigger: GCTGGCGGCGAGCGGGTTCACAGGGAGCCGGCGGCGGTGGTACCACAGCCTGGTGATGTCAGACACCAGTGGTTCTTTCAGAGGGGTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492238.1 |
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| CDS TCA 90 bp | CCTGCTTGGGGCTGGAGAGACCCCTCTGAAAGAACCACTGGTGTCTaGCATCACCAGGCTGTGGTACCACCGCCGCCGGCTCCCTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PAWGWRDPSERTTGV*HHQAVVPPPPAPCE Trigger: TTCACAGGGAGCCGGCGGCGGTGGTACCACAGCCTGGTGATGTCAGACACCAGTGGTTCTTTCAGAGGGGTCTCTCCAGCCCCAAGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492238.1 |
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| CDS-3UTR CAA 90 bp | CCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGGGGCTGGCAGTGGGTGTCCTTGACTaGCTTGAGCGTTGGAGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PWPMCVGITPSGSMLGLAVGVLD*LERWSY Trigger: ATAACTCCAACGCTCAAGCAAGTCAAGGACACCCAC...TGCCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | GGATATCGGCCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGCCAAAGGTGGCCGGGTaGACTTGGTTCTCAGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GYRPWPMCVGITPSGSMLPKVAG*TWFSVF Trigger: AAACACTGAGAACCAAGTCAACCCGGCCACCTTTGG...CAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGGCCGATATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | GGATATCGGCCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGTCTGGTAGCATTTCCTaGACAGTCCCCATGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GYRPWPMCVGITPSGSMLSGSIS*TVPMSS Trigger: GGAGGACATGGGGACTGTCAAGGAAATGCTACCAGA...CAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGGCCGATATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS CCA 90 bp | AGGAGTTTTGAAAAATCTCGGAGCTCTCTGGCAGGCGGGCGCATCTaGACTTCTAGGAGGCTGGTCCCAGGTGACTCCAGTGTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSFEKSRSSLAGGRI*TSRRLVPGDSSVLL Trigger: GAGCAGCACACTGGAGTCACCTGGGACCAGCCTCCTAGAAGTCCAGATGCGCCCGCCTGCCAGAGAGCTCCGAGATTTTTCAAAACTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS-3UTR CAA 90 bp | CCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGGGGCTGGCACTTCTTTGCTTCTGCTaGTCTGGAACACAAATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PWPMCVGITPSGSMLGLALLCFC*SGTQML Trigger: AAGCATTTGTGTTCCAGACAAGCAGAAGCAAAGAAG...TGCCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | GGCTGGCCGAGAGTCGGGTCATCTGGTAGCATTTCCTTGACAGTCCCCATGTCCACCTGGATGAGCTTATaGCCCATGGCAGTGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GWPRVGSSGSISLTVPMSTWMSL*PMAVST Trigger: GGTGGACACTGCCATGGGCAATAAGCTCATCCAGGT...GGACATGGGGACTGTCAAGGAAATGCTACCAGATGACCCGACTCTCGGCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | TGCTGGGGCTGGCACACGCCTGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGAGTCCGTGGGTGTCCTaGACTTGCTTGAGCGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CWGWHTPATVRNSENGKVSPWVS*TCLSVG Trigger: TCCAACGCTCAAGCAAGTCAAGGACACCCACGGACT...CACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGTGTGCCAGCCCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | TTTCATCTCTGGGTTGTTCTCCAGTTCATCTGCGCCACTCCGGTCACTTGCCAGAATCTGGTCGCGGTGTaGAGTCCGTGGGTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FHLWVVLQFICATPVTCQNLVAV*SPWVSL Trigger: CAAGGACACCCACGGACTCAACACCGCGACCAGATT...CTGGCAAGTGACCGGAGTGGCGCAGATGAACTGGAGAACAACCCAGAGATGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | ATTTCCTTGACAGTCCCCATGTCCTCCTCCTCCTCTTCCTCCTCTAGGCATGACGGTGGCCGGGTTGACTaGGTTCTCAGTGTTTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISLTVPMSSSSSSSSRHDGGRVD*VLSVLP Trigger: GGGCAAAACACTGAGAACCAAGTCAACCCGGCCACC...GTCATGCCTAGAGGAGGAAGAGGAGGAGGAGGACATGGGGACTGTCAAGGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | GGATATCGGCCCTGGCCCATGTGTGTGGGCATCACCCCCAGTGGCTCCATGCTGTTGGTAAACTCTTCTTaGCTTCTGCTTGTCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GYRPWPMCVGITPSGSMLLVNSS*LLLVWN Trigger: GTTCCAGACAAGCAGAAGCAAAGAAGAGTTTACCAA...CAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGGCCGATATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | TGCTGGGGCTGGCACACGCCTGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGGGTTATGAGGGCTTCTaGTCCCATAGGAAGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CWGWHTPATVRNSENGKVGYEGF*SHRKAE Trigger: CTCAGCCTTCCTATGGGACAAGAAGCCCTCATAACC...CACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGTGTGCCAGCCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | ACGCCTGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGCCTGGTCTGGCTGGCTTGGTTCTCAGTGTTTaGCCCACAGGTCTCCACGTA | + |
|
Preference number: 5 (lower is better) Translates to: TPATVRNSENGKVPGLAGLVLSV*PTGLHV Trigger: TACGTGGAGACCTGTGGGCAAAACACTGAGAACCAA...GCCAGCCAGACCAGGCACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | ACGCCTGCGACAGTGAGGAATTCAGAGAATGGAAAAGTGCCTGGTCTGGCTGGCCAGCATGACTGTGTCTaGCTGCAGAGACTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TPATVRNSENGKVPGLAGQHDCV*LQRLPE Trigger: TTCTGGAAGTCTCTGCAGCAAGACACAGTCATGCTG...GCCAGCCAGACCAGGCACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS GCA 90 bp | GTCCTGCCAGTCCTTGCTCTCAAGAGCCATTTATGTCAGTGTCATTaGTGTGTGACATGGAGCTGCTGGCCATCTCCAAGTTCACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLPVLALKSHLCQCH*CVTWSCWPSPSSLP Trigger: AGGAAGTGAACTTGGAGATGGCCAGCAGCTCCATGTCACACAGCAATGACACTGACATAAATGGCTCTTGAGAGCAAGGACTGGCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS CCA 90 bp | TTGTCGACCAACACCTTTTCCAATCTGGTCGCGGTGTTGAGTCCGTaGGTGTCCTTGACTTGCTTGAGCGTTGGAGTTATTCAGGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSTNTFSNLVAVLSP*VSLTCLSVGVIQAV Trigger: AACTGCCTGAATAACTCCAACGCTCAAGCAAGTCAAGGACACCCACGGACTCAACACCGCGACCAGATTGGAAAAGGTGTTGGTCGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS TCA 90 bp | GGTTCTCAGTGTTTTGCCCACAGGTCTCCACGTAAATCTCATACATaGGACAGCGAGGGACGCTGCACTCTTCGCAAATGCAGAAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSQCFAHRSPRKSHT*DSEGRCTLRKCRSC Trigger: ACAACTTCTGCATTTGCGAAGAGTGCAGCGTCCCTCGCTGTCTCATGTATGAGATTTACGTGGAGACCTGTGGGCAAAACACTGAGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000428343.6 ENST00000481179.5 ENST00000484091.1 ENST00000646446.1 ENST00000646893.1 |
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| CDS-3UTR CAA 90 bp | TCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACAGGAGTAAATCTGGTCGCGGTGTaGAGTCCGTGGGTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: STIVAVFVSKEGHHITGVNLVAV*SPWVSL Trigger: CAAGGACACCCACGGACTCAACACCGCGACCAGATT...TACTCCTGTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR CAA 90 bp | TTTCATCTCTGGGTTGTTCTCCAGTTCATCTGCGCCACTCCGGTCACTTGCCAGTTTCTTTGCCTGTTCTaGCTCCAGAAATGGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: FHLWVVLQFICATPVTCQFLCLF*LQKWTS Trigger: AGATGTCCATTTCTGGAGCAAGAACAGGCAAAGAAA...CTGGCAAGTGACCGGAGTGGCGCAGATGAACTGGAGAACAACCCAGAGATGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | TGTCCCATAGGAAGGCTGAGTTTAACTGCGCTTTCAGTGGTTTCATCTTCCAACATCCTGAGGACCATGTaGCTCACACCCACGGGATAT | + |
|
Preference number: 5 (lower is better) Translates to: CPIGRLSLTALSVVSSSNILRTM*LTPTGY Trigger: ATATCCCGTGGGTGTGAGCAACATGGTCCTCAGGAT...GTTGGAAGATGAAACCACTGAAAGCGCAGTTAAACTCAGCCTTCCTATGGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | TCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACAGGAGTAAGTCCGTGGGTGTCCTaGACTTGCTTGAGCGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: STIVAVFVSKEGHHITGVSPWVS*TCLSVG Trigger: TCCAACGCTCAAGCAAGTCAAGGACACCCACGGACT...TACTCCTGTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR CAA 90 bp | AAATGTCTCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACGGTGGCCGGGTTGACTaGGTTCTCAGTGTTTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KCLDNSCSIRQQGRPSYYGGRVD*VLSVLP Trigger: GGGCAAAACACTGAGAACCAAGTCAACCCGGCCACC...GTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR CAA 90 bp | ACTCCGGTCACTTGCCAGGGCTTTCTTAGAAGTAGCCAAAGTGCCTTGATTGATAAGCTGGCGGCCAATTaGGTAAACTCTTCTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TPVTCQGFLRSSQSALIDKLAAN*VNSSLL Trigger: AAGCAAAGAAGAGTTTACCAAATTGGCCGCCAGCTT...ATCAATCAAGGCACTTTGGCTACTTCTAAGAAAGCCCTGGCAAGTGACCGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | TCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACAGGAGTATTGGTTCTCAGTGTTTaGCCCACAGGTCTCCACGTA | + |
|
Preference number: 5 (lower is better) Translates to: STIVAVFVSKEGHHITGVLVLSV*PTGLHV Trigger: TACGTGGAGACCTGTGGGCAAAACACTGAGAACCAA...TACTCCTGTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR CAA 90 bp | AAATGTCTCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACCCAAAGGTGGCCGGGTaGACTTGGTTCTCAGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KCLDNSCSIRQQGRPSYYPKVAG*TWFSVF Trigger: AAACACTGAGAACCAAGTCAACCCGGCCACCTTTGG...GTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR CAA 90 bp | GTCACTTGCCAGGGCTTTCTTAGAAGTAGCCAAAGTGCCTTGATTGATGATGGCTACAGGAGTATTTCTTaGCCTGTTCTTGCTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VTCQGFLRSSQSALIDDGYRSIS*PVLAPE Trigger: TTCTGGAGCAAGAACAGGCAAAGAAATACTCCTGTA...GCCATCATCAATCAAGGCACTTTGGCTACTTCTAAGAAAGCCCTGGCAAGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | AGTTTAACTGCGCTTTCAGTGGTTTCATCTTCCAACAGCACCTGGATGAGCTTACATTTCATCTCTGGGTaGTTCTCCAGTTCATCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SLTALSVVSSSNSTWMSLHFISG*FSSSSA Trigger: CGCAGATGAACTGGAGAACAACCCAGAGATGAAATG...TAAGCTCATCCAGGTGCTGTTGGAAGATGAAACCACTGAAAGCGCAGTTAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481179.5 |
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| CDS-3UTR CAA 90 bp | AAATGTCTCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACTTTCTTTGCCTGTTCTaGCTCCAGAAATGGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: KCLDNSCSIRQQGRPSYYFLCLF*LQKWTS Trigger: AGATGTCCATTTCTGGAGCAAGAACAGGCAAAGAAA...GTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS-3UTR CAA 90 bp | AAATGTCTCGACAATAGTTGCAGTATTCGTCAGCAAGGAAGGCCATCATATTACTACAGGAGTATTTCTTaGCCTGTTCTTGCTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: KCLDNSCSIRQQGRPSYYYRSIS*PVLAPE Trigger: TTCTGGAGCAAGAACAGGCAAAGAAATACTCCTGTA...GTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484091.1 |
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| CDS CCA 72 bp | CCGAGGCAGGCAGCGAGCGGCGGCCGTGGGCGGCGCTaGGTTGCACCGGTCCTGCTACCGCCGCTCCTCGGT | + |
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Preference number: 6 (lower is better) Translates to: PRQAASGGRGRR*VAPVLLPPLLG Trigger: ACCGAGGAGCGGCGGTAGCAGGACCGGTGCAACCCAGCGCCGCCCACGGCCGCCGCTCGCTGCCTGCCTCGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646893.1 |
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| CDS CAA 72 bp | GGCAGGCAGCGAGCGGCGGCCGTGGGCGGCGCTGGGTaGCACCGGTCCTGCTACCGCCGCTCCTCGGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: GRQRAAAVGGAG*HRSCYRRSSVF Trigger: AAACACCGAGGAGCGGCGGTAGCAGGACCGGTGCAACCCAGCGCCGCCCACGGCCGCCGCTCGCTGCCTGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646893.1 |
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| CDS CAA 90 bp | CAGCACCGAGGCAGGCAGCGAGCGGCGGCCGTGGGCGGCGCTGGGTaGCACCGGTCCTGCTACCGCCGCTCCTCGGTGTTTACTTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: QHRGRQRAAAVGGAG*HRSCYRRSSVFTLE Trigger: TTCTAAAGTAAACACCGAGGAGCGGCGGTAGCAGGACCGGTGCAACCCAGCGCCGCCCACGGCCGCCGCTCGCTGCCTGCCTCGGTGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646893.1 |
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| CDS GCA 72 bp | CAGAAGTTGTCGACCAACCACTGGATGACGCCGCTGTaGGGGCCCCGGCTACCCTCGCCGCTCGACGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: QKLSTNHWMTPL*GPRLPSPLDGE Trigger: CTCGCCGTCGAGCGGCGAGGGTAGCCGGGGCCCGCACAGCGGCGTCATCCAGTGGTTGGTCGACAACTTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646893.1 |
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| CDS GCA 72 bp | GCGGCGGCCGTGGGCGGCGCTGGGTTGCACCGGTCCTaGTACCGCCGCTCCTCGGTGTTTACTTTAGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: AAAVGGAGLHRS*YRRSSVFTLER Trigger: CCTTTCTAAAGTAAACACCGAGGAGCGGCGGTAGCAGGACCGGTGCAACCCAGCGCCGCCCACGGCCGCCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646893.1 |
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| CDS TCA 72 bp | GGCTGGAGAGACCCCTCTGAAAGAACCACTGGTGTCTaGCATCACCAGGCTGTGGTACCACCGCCGCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: GWRDPSERTTGV*HHQAVVPPPPA Trigger: AGCCGGCGGCGGTGGTACCACAGCCTGGTGATGTCAGACACCAGTGGTTCTTTCAGAGGGGTCTCTCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492238.1 |
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| CDS CCA 72 bp | CTGAAAGAACCACTGGTGTCTGACATCACCAGGCTGTaGTACCACCGCCGCCGGCTCCCTGTGAACCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: LKEPLVSDITRL*YHRRRLPVNPL Trigger: GAGCGGGTTCACAGGGAGCCGGCGGCGGTGGTACCACAGCCTGGTGATGTCAGACACCAGTGGTTCTTTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492238.1 |
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| CDS TCA 72 bp | AGTGTGCTGCTCCAGGTGAGCAGTGCCACCTCAACGTaGGTCCCCATATCTGTAGCCAGGTCCTGCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SVLLQVSSATST*VPISVARSCQS Trigger: GGACTGGCAGGACCTGGCTACAGATATGGGGACTCACGTTGAGGTGGCACTGCTCACCTGGAGCAGCACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS CCA 72 bp | GAAAAATCTCGGAGCTCTCTGGCAGGCGGGCGCATCTaGACTTCTAGGAGGCTGGTCCCAGGTGACTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: EKSRSSLAGGRI*TSRRLVPGDSS Trigger: ACTGGAGTCACCTGGGACCAGCCTCCTAGAAGTCCAGATGCGCCCGCCTGCCAGAGAGCTCCGAGATTTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS GCA 72 bp | CAACCGGCTTTTTCAGGGTCCCGGGTGATGCTAATGTaGCCGCCGTTGCTGAAAACCACTGTCTCTAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: QPAFSGSRVMLM*PPLLKTTVSRS Trigger: ACTCCTAGAGACAGTGGTTTTCAGCAACGGCGGGCACATTAGCATCACCCGGGACCCTGAAAAAGCCGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS CCA 72 bp | TTGGCTGCACACACAGAAGGAAAACAGCTTCCTGCTTaGGGCTGGAGAGACCCCTCTGAAAGAACCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: LAAHTEGKQLPA*GWRDPSERTTG Trigger: ACCAGTGGTTCTTTCAGAGGGGTCTCTCCAGCCCCAAGCAGGAAGCTGTTTTCCTTCTGTGTGTGCAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492238.1 |
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| CDS TCA 72 bp | AGACAAAGGGGATCCAACTGGGTCTGTCTTCATCGGTaGATGATCTTCACACTGAGAGGGAGGTCCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RQRGSNWVCLHR*MIFTLRGRSSG Trigger: CCCAGAGGACCTCCCTCTCAGTGTGAAGATCATTCACCGATGAAGACAGACCCAGTTGGATCCCCTTTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492238.1 |
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| CDS CAA 72 bp | TCCAATCTGGTCGCGGTGTTGAGTCCGTGGGTGTCCTaGACTTGCTTGAGCGTTGGAGTTATTCAGGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: SNLVAVLSPWVS*TCLSVGVIQAV Trigger: AACTGCCTGAATAACTCCAACGCTCAAGCAAGTCAAGGACACCCACGGACTCAACACCGCGACCAGATTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS CAA 72 bp | TTGTCGACCAACACCTTTTCCAATCTGGTCGCGGTGTaGAGTCCGTGGGTGTCCTTGACTTGCTTGAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: LSTNTFSNLVAV*SPWVSLTCLSV Trigger: AACGCTCAAGCAAGTCAAGGACACCCACGGACTCAACACCGCGACCAGATTGGAAAAGGTGTTGGTCGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000428343.6 ENST00000481179.5 ENST00000484091.1 ENST00000646446.1 |
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| CDS CAA 72 bp | CAATCTCACAAGCTTCCCAAAGGTGGCCGGGTTGACTaGGTTCTCAGTGTTTTGCCCACAGGTCTCCACGTA | + |
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Preference number: 6 (lower is better) Translates to: QSHKLPKGGRVD*VLSVLPTGLHV Trigger: TACGTGGAGACCTGTGGGCAAAACACTGAGAACCAAGTCAACCCGGCCACCTTTGGGAAGCTTGTGAGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000481179.5 ENST00000484091.1 ENST00000646446.1 |
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| CDS CAA 90 bp | GGTCCTGCCAGTCCTTGCTCTCAAGAGCCATTTATGTCAGTGTCATaGCTGTGTGACATGGAGCTGCTGGCCATCTCCAAGTTCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: GPASPCSQEPFMSVS*LCDMELLAISKFTS Trigger: GGAAGTGAACTTGGAGATGGCCAGCAGCTCCATGTCACACAGCAATGACACTGACATAAATGGCTCTTGAGAGCAAGGACTGGCAGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS TCA 72 bp | TGTTTTGCCCACAGGTCTCCACGTAAATCTCATACATaGGACAGCGAGGGACGCTGCACTCTTCGCAAATGC | + |
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Preference number: 6 (lower is better) Translates to: CFAHRSPRKSHT*DSEGRCTLRKC Trigger: GCATTTGCGAAGAGTGCAGCGTCCCTCGCTGTCTCATGTATGAGATTTACGTGGAGACCTGTGGGCAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000428343.6 ENST00000481179.5 ENST00000484091.1 ENST00000646446.1 ENST00000646893.1 |
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| CDS TCA 72 bp | GTGAATGATCTTCACACTTCCCAAAGGTGGCCGGGTTaGCTTGGTTCTCAGTGTTTTGCCCACAGGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VNDLHTSQRWPG*LGSQCFAHRSP Trigger: TGGAGACCTGTGGGCAAAACACTGAGAACCAAGTCAACCCGGCCACCTTTGGGAAGTGTGAAGATCATTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000428343.6 ENST00000646893.1 |
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| CDS TCA 72 bp | AGACAAAGGGGATCCAACTGGGTCTGTCTTCATCGGTaGATGATCTTCACACTTCCCAAAGGTGGCCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: RQRGSNWVCLHR*MIFTLPKGGRV Trigger: AACCCGGCCACCTTTGGGAAGTGTGAAGATCATTCACCGATGAAGACAGACCCAGTTGGATCCCCTTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000428343.6 ENST00000646893.1 |
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| CDS TCA 72 bp | AAACCAATCTCACAAGCTTCCCAAAGGTGGCCGGGTTaGCTTGGTTCTCAGTGTTTTGCCCACAGGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: KPISQASQRWPG*LGSQCFAHRSP Trigger: TGGAGACCTGTGGGCAAAACACTGAGAACCAAGTCAACCCGGCCACCTTTGGGAAGCTTGTGAGATTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000481179.5 ENST00000484091.1 ENST00000646446.1 |
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| CDS GCA 72 bp | CTGGTCGCGGTGTTGAGTCCGTGGGTGTCCTTGACTTaGTTGAGCGTTGGAGTTATTCAGGCAGTTTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LVAVLSPWVSLT*LSVGVIQAVFK Trigger: TTTGAAAACTGCCTGAATAACTCCAACGCTCAAGCAAGTCAAGGACACCCACGGACTCAACACCGCGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS CAA 72 bp | TCTGGTCGCGGTGTTGAGTCCGTGGGTGTCCTTGACTaGCTTGAGCGTTGGAGTTATTCAGGCAGTTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: SGRGVESVGVLD*LERWSYSGSFQ Trigger: TTGAAAACTGCCTGAATAACTCCAACGCTCAAGCAAGTCAAGGACACCCACGGACTCAACACCGCGACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS CAA 72 bp | ATGATCTTCACACTTCCCAAAGGTGGCCGGGTTGACTaGGTTCTCAGTGTTTTGCCCACAGGTCTCCACGTA | + |
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Preference number: 6 (lower is better) Translates to: MIFTLPKGGRVD*VLSVLPTGLHV Trigger: TACGTGGAGACCTGTGGGCAAAACACTGAGAACCAAGTCAACCCGGCCACCTTTGGGAAGTGTGAAGATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000428343.6 ENST00000646893.1 |
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| CDS CAA 72 bp | AAAACCAATCTCACAAGCTTCCCAAAGGTGGCCGGGTaGACTTGGTTCTCAGTGTTTTGCCCACAGGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KTNLTSFPKVAG*TWFSVFCPQVS Trigger: GGAGACCTGTGGGCAAAACACTGAGAACCAAGTCAACCCGGCCACCTTTGGGAAGCTTGTGAGATTGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000481179.5 ENST00000484091.1 ENST00000646446.1 |
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| CDS CAA 90 bp | ATGCAGAAGTTGTCGACCAACACCTTTTCCAATCTGGTCGCGGTGTaGAGTCCGTGGGTGTCCTTGACTTGCTTGAGCGTTGGAGTTATT | + |
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Preference number: 6 (lower is better) Translates to: MQKLSTNTFSNLVAV*SPWVSLTCLSVGVI Trigger: AATAACTCCAACGCTCAAGCAAGTCAAGGACACCCACGGACTCAACACCGCGACCAGATTGGAAAAGGTGTTGGTCGACAACTTCTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS CCA 72 bp | AACACCTTTTCCAATCTGGTCGCGGTGTTGAGTCCGTaGGTGTCCTTGACTTGCTTGAGCGTTGGAGTTATT | + |
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Preference number: 6 (lower is better) Translates to: NTFSNLVAVLSP*VSLTCLSVGVI Trigger: AATAACTCCAACGCTCAAGCAAGTCAAGGACACCCACGGACTCAACACCGCGACCAGATTGGAAAAGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS CAA 72 bp | GTCGCGGTGTTGAGTCCGTGGGTGTCCTTGACTTGCTaGAGCGTTGGAGTTATTCAGGCAGTTTTCAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: VAVLSPWVSLTC*SVGVIQAVFKN Trigger: ATTTTTGAAAACTGCCTGAATAACTCCAACGCTCAAGCAAGTCAAGGACACCCACGGACTCAACACCGCGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS CAA 90 bp | TCCAATCTGGTCGCGGTGTTGAGTCCGTGGGTGTCCTTGACTTGCTaGAGCGTTGGAGTTATTCAGGCAGTTTTCAAAAATATTGATACC | + |
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Preference number: 6 (lower is better) Translates to: SNLVAVLSPWVSLTC*SVGVIQAVFKNIDT Trigger: GGTATCAATATTTTTGAAAACTGCCTGAATAACTCCAACGCTCAAGCAAGTCAAGGACACCCACGGACTCAACACCGCGACCAGATTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428343.6 |
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| CDS CCA 72 bp | AGTAACTTCTTTGAGTTTGGAGATCTGCAAGAGGGCTaGAACACCTTCCAAAGCATTAAGGAGCCACAGCTT | + |
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Preference number: 6 (lower is better) Translates to: SNFFEFGDLQEG*NTFQSIKEPQL Trigger: AAGCTGTGGCTCCTTAATGCTTTGGAAGGTGTTCCAGCCCTCTTGCAGATCTCCAAACTCAAAGAAGTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000428343.6 ENST00000646446.1 ENST00000646893.1 |
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| CDS GCA 72 bp | AGTCCTCCACATTTCGTAAAATGTCTCGACAATAGTTaGAGTATTCGTCAGCAAGGAAGGCCATCATATTAC | + |
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Preference number: 6 (lower is better) Translates to: SPPHFVKCLDNS*SIRQQGRPSYY Trigger: GTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATTTTACGAAATGTGGAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000428343.6 ENST00000646446.1 ENST00000646893.1 |
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| CDS CCA 72 bp | ATAGCATGTAAGCACTTCAGTGCAGTGGGTTACCATTaGACATCTGTTGACGGGGTCTCTTCAAATAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: IACKHFSAVGYH*TSVDGVSSNKN Trigger: ATTTTTATTTGAAGAGACCCCGTCAACAGATGTCCAATGGTAACCCACTGCACTGAAGTGCTTACATGCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492238.1 |
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