RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RFX5 (Homo sapiens)

Ensembl gene IDs: ENSG00000143390

Ensembl transcript IDs: ENST00000290524.8, ENST00000368870.6, ENST00000392746.7, ENST00000412774.5, ENST00000421986.5, ENST00000422595.5, ENST00000430227.5, ENST00000435314.5, ENST00000436271.5, ENST00000436637.5, ENST00000437327.5, ENST00000444392.5, ENST00000450506.5, ENST00000452456.1, ENST00000452671.7, ENST00000458484.5, ENST00000469513.5, ENST00000475144.1, ENST00000478564.5, ENST00000479681.5, ENST00000494217.5

Found 480 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTTTTCCCAAGGATACATCTGGAGGGTCTGCATTCCTTTCTCATTaGTGCCGCCTGACCACAGAACTAGCTTTTTCCGTGACATCTAAC +
Preference number: 1 (lower is better)
Translates to: AFPKDTSGGSAFLSH*CRLTTELAFSVTSN
Trigger: GTTAGATGTCACGGAAAAAGCTAGTTCTGTGGTCAGGCGGCACCAATGAGAAAGGAATGCAGACCCTCCAGATGTATCCTTGGGAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR GCA 90 bp TTTCCCAAGGATACATCTGGAGGGTCTGCATTCCTTTCTCATTGGTaGCGCCTGACCACAGAACTAGCTTTTTCCGTGACATCTAACCTA +
Preference number: 1 (lower is better)
Translates to: FPKDTSGGSAFLSHW*RLTTELAFSVTSNL
Trigger: TAGGTTAGATGTCACGGAAAAAGCTAGTTCTGTGGTCAGGCGGCACCAATGAGAAAGGAATGCAGACCCTCCAGATGTATCCTTGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR-3UTR TCA 90 bp TTCCAGGTGGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTGCTCAGTCCAGTGGTGGGTCCTaGGGGGAGCTGAAGGTAGAG +
Preference number: 2 (lower is better)
Translates to: FQVVADPPIGIHVLLIAQSSGGS*GELKVE
Trigger: CTCTACCTTCAGCTCCCCTCAGGACCCACCACTGGA...CTGAGCAATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
3UTR-3UTR TCA 90 bp GGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTGCTCAGTGTACTTGTCCAGTGGTGGGTCCTaGGGGGAGCTGAAGGTAGAG +
Preference number: 2 (lower is better)
Translates to: GCGSTYRHTCTPHCSVYLSSGGS*GELKVE
Trigger: CTCTACCTTCAGCTCCCCTCAGGACCCACCACTGGA...CAAGTACACTGAGCAATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
3UTR-3UTR CCA 90 bp AACCCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGACTGGCAGCCATTAAGTaGCCCAGACTTAAATGGTCC +
Preference number: 2 (lower is better)
Translates to: NPAVLSPDTYDKMLPPGGLAAIK*PRLKWS
Trigger: GGACCATTTAAGTCTGGGCCACTTAATGGCTGCCAG...TCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR-3UTR CCA 90 bp CCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACCTGGCAGCCATTAAGTaGCCCAGACTTAAATGGTCC +
Preference number: 2 (lower is better)
Translates to: PAVLSPDTYDKMLPPGGYLAAIK*PRLKWS
Trigger: GGACCATTTAAGTCTGGGCCACTTAATGGCTGCCAG...GTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR-3UTR CCA 90 bp CAGACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATATTTTGTCTCCAGTGGTaGGTCCTGAGGGGAGCTGAA +
Preference number: 2 (lower is better)
Translates to: QTGVSVLFQVVADPPIGIFCLQW*VLRGAE
Trigger: TTCAGCTCCCCTCAGGACCCACCACTGGAGACAAAA...TATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
3UTR-3UTR TCA 90 bp AACCCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGAGGCTACAGCTTGTATTaGGGGAAATGCAAGACTGAG +
Preference number: 2 (lower is better)
Translates to: NPAVLSPDTYDKMLPPGGGYSLY*GKCKTE
Trigger: CTCAGTCTTGCATTTCCCTCAATACAAGCTGTAGCC...TCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR-3UTR TCA 90 bp CCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACGAAAGCAGGTCTAGCTaGTCTCAACTTAGCAAGCTA +
Preference number: 2 (lower is better)
Translates to: PAVLSPDTYDKMLPPGGYESRSS*SQLSKL
Trigger: TAGCTTGCTAAGTTGAGATCAGCTAGACCTGCTTTC...GTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR CAA 90 bp CAAGACTCTCACAGTACTTCCGATAGGCATCATAAACACTTTGCTTaGGCAGACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCC +
Preference number: 2 (lower is better)
Translates to: QDSHSTSDRHHKHFA*ADRCQCALPGGCGS
Trigger: GGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTCTGCCAAAGCAAAGTGTTTATGATGCCTATCGGAAGTACTGTGAGAGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421986.5
3UTR-3UTR TCA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGCCCAGGGTATCAAGCTaGAAAGGTCAGAGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSEPRVSS*KGQRQQ
Trigger: TTGCTGCCTCTGACCTTTTCAGCTTGATACCCTGGG...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR-3UTR TCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCACCCAGGGTATCAAGCTaGAAAGGTCAGAGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSPRVSS*KGQRQQ
Trigger: TTGCTGCCTCTGACCTTTTCAGCTTGATACCCTGGG...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR-3UTR TCA 90 bp CATTGTCAGAAAATTTCTGTACATCTTGAGGGTGTCAGACTGAAAAAGGACCTTAAGGCCAAGGCAGGCTaGTCACAAGGTCAGGAGATC +
Preference number: 2 (lower is better)
Translates to: HCQKISVHLEGVRLKKDLKAKAG*SQGQEI
Trigger: GATCTCCTGACCTTGTGATCAGCCTGCCTTGGCCTT...AAGGTCCTTTTTCAGTCTGACACCCTCAAGATGTACAGAAATTTTCTGACAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
3UTR-3UTR CCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCATCCCAAGGATACATCTaGAGGGTCTGCATTCCTTTC +
Preference number: 2 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSSQGYI*RVCIPF
Trigger: GAAAGGAATGCAGACCCTCCAGATGTATCCTTGGGA...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR-3UTR TCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAGAAAGCAGGTCTAGCTaGTCTCAACTTAGCAAGCTA +
Preference number: 2 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSESRSS*SQLSKL
Trigger: TAGCTTGCTAAGTTGAGATCAGCTAGACCTGCTTTC...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR-3UTR CCA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATATCCCAAGGATACATCTaGAGGGTCTGCATTCCTTTC +
Preference number: 2 (lower is better)
Translates to: QDSLTEATLCRGQSRSSISQGYI*RVCIPF
Trigger: GAAAGGAATGCAGACCCTCCAGATGTATCCTTGGGA...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR CCA 72 bp GGCCACCCAAGCAACTCCCTGCTCCTAGTTTCCACTTaGGGAATCCATGTGATTTTGGGGAGGCTGACCCCC +
Preference number: 3 (lower is better)
Translates to: GHPSNSLLLVST*GIHVILGRLTP
Trigger: GGGGGTCAGCCTCCCCAAAATCACATGGATTCCCCAAGTGGAAACTAGGAGCAGGGAGTTGCTTGGGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR-3UTR CAA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGAGGAATCCATGTGATTTaGGGGAGGCTGACCCCCACC +
Preference number: 3 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRGIHVI*GRLTPT
Trigger: GGTGGGGGTCAGCCTCCCCAAAATCACATGGATTCC...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR-3UTR CAA 90 bp GACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACACTTGGCTCTGAGCTTTaGTCTCCAGTGGTGGGTCCT +
Preference number: 3 (lower is better)
Translates to: DRCQCALPGGCGSTYRHTLGSEL*SPVVGP
Trigger: AGGACCCACCACTGGAGACAAAAGCTCAGAGCCAAG...TGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
3UTR GCA 72 bp TTGGCAGACAGGTGTCAGTGTGCTCTTCCAGGTGGTTaGGGATCCACCTATAGGCATACATGTACTCCTCAT +
Preference number: 3 (lower is better)
Translates to: LADRCQCALPGG*GSTYRHTCTPH
Trigger: ATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
3UTR GCA 72 bp GATACATCTGGAGGGTCTGCATTCCTTTCTCATTGGTaGCGCCTGACCACAGAACTAGCTTTTTCCGTGACA +
Preference number: 3 (lower is better)
Translates to: DTSGGSAFLSHW*RLTTELAFSVT
Trigger: TGTCACGGAAAAAGCTAGTTCTGTGGTCAGGCGGCACCAATGAGAAAGGAATGCAGACCCTCCAGATGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR GCA 72 bp GTTTACTGCTTTTCCCAAGGATACATCTGGAGGGTCTaGATTCCTTTCTCATTGGTGCCGCCTGACCACAGA +
Preference number: 3 (lower is better)
Translates to: VYCFSQGYIWRV*IPFSLVPPDHR
Trigger: TCTGTGGTCAGGCGGCACCAATGAGAAAGGAATGCAGACCCTCCAGATGTATCCTTGGGAAAAGCAGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR CCA 72 bp AAGGATACATCTGGAGGGTCTGCATTCCTTTCTCATTaGTGCCGCCTGACCACAGAACTAGCTTTTTCCGTG +
Preference number: 3 (lower is better)
Translates to: KDTSGGSAFLSH*CRLTTELAFSV
Trigger: CACGGAAAAAGCTAGTTCTGTGGTCAGGCGGCACCAATGAGAAAGGAATGCAGACCCTCCAGATGTATCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR CCA 72 bp AAAGTCAGTCCGGTATTTAGAGACATACTGAACTACTaGGTCAAGTCTTCACCTGGAGCCAGCACTACCTAT +
Preference number: 3 (lower is better)
Translates to: KVSPVFRDILNY*VKSSPGASTTY
Trigger: ATAGGTAGTGCTGGCTCCAGGTGAAGACTTGACCCAGTAGTTCAGTATGTCTCTAAATACCGGACTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR CCA 72 bp AAAAGTGTAATCTTAGGAATGCTGGCAGCCATTAAGTaGCCCAGACTTAAATGGTCCTACAGAAGATGCAAC +
Preference number: 3 (lower is better)
Translates to: KSVILGMLAAIK*PRLKWSYRRCN
Trigger: GTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGCCAGCATTCCTAAGATTACACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR-3UTR CAA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGGTCACTACAGATTTATaGGTTACACTAAAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQVTTDL*VTLKPR
Trigger: CCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGAC...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp CCTGGTGTTAGCGGCCACCCAAGCAACTCCCTGCTCCTAGTTTCCACTTGGGGAGCAGAGATGAGATGCTaGTGTAGCAGGAAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: PGVSGHPSNSLLLVSTWGAEMRC*CSRKRA
Trigger: CGCCCGCTTCCTGCTACAGCAGCATCTCATCTCTGC...TCCCCAAGTGGAAACTAGGAGCAGGGAGTTGCTTGGGTGGCCGCTAACACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACGGTCAGGGCACACGCTaGCTCCACCAGTTCATCTCG +
Preference number: 4 (lower is better)
Translates to: PAVLSPDTYDKMLPPGGYGQGTR*LHQFIS
Trigger: CGAGATGAACTGGTGGAGGCAGCGTGTGCCCTGACC...GTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp GATACTCAGAGAAGGAGGCCATGGGTAGGCTCGAAGAGTCCCGATAGGCATCATTCCAGTGGTGGGTCCTaGGGGGAGCTGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: DTQRRRPWVGSKSPDRHHSSGGS*GELKVE
Trigger: CTCTACCTTCAGCTCCCCTCAGGACCCACCACTGGA...ATGATGCCTATCGGGACTCTTCGAGCCTACCCATGGCCTCCTTCTCTGAGTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435314.5
CDS-3UTR TCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGAGTTGCCTTCCCCTCCTaGGCCCCATGTCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRVAFPS*APCLPW
Trigger: CCATGGGAGACATGGGGCTCAGGAGGGGAAGGCAAC...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCACTTCCGCTCTCCACGTaGGAGAGGACCGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSLPLST*ERTGPS
Trigger: ACTGGGGCCGGTCCTCTCGCACGTGGAGAGCGGAAG...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp AACCCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGACTTTGCTGCTTTAGCTaGTGGAGCCTGCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: NPAVLSPDTYDKMLPPGGLCCFS*WSLPTG
Trigger: GCCAGTGGGCAGGCTCCACCAGCTAAAGCAGCAAAG...TCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp CCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACCAGATCGGGCAGAGATaGGATGCTGCTGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PAVLSPDTYDKMLPPGGYQIGQR*DAAVAG
Trigger: TCCTGCTACAGCAGCATCTCATCTCTGCCCGATCTG...GTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp TGGCAGACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCTCTGCCATCCCGGCATaGGGGCTTCTCCGAAAATTA +
Preference number: 4 (lower is better)
Translates to: WQTGVSVLFQVVADPPIGSAIPA*GLLRKL
Trigger: TAATTTTCGGAGAAGCCCTCATGCCGGGATGGCAGA...GCCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CCA 90 bp AACCCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGAAGATCCTTAGGAGGCTaGGCCAGTCTCTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: NPAVLSPDTYDKMLPPGGRSLGG*ASLSGF
Trigger: GAAGCCAGAGAGACTGGCCCAGCCTCCTAAGGATCT...TCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CCTGGTGTTAGCGGCCACCCAAGCAACTCCCTGCTCCTAGTTTCCACTTGGGGATTGTCATGTGGTCCTTaGTCACCACCTATGCCTACC +
Preference number: 4 (lower is better)
Translates to: PGVSGHPSNSLLLVSTWGLSCGP*SPPMPT
Trigger: GGTAGGCATAGGTGGTGACCAAGGACCACATGACAA...TCCCCAAGTGGAAACTAGGAGCAGGGAGTTGCTTGGGTGGCCGCTAACACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CCTGGTGTTAGCGGCCACCCAAGCAACTCCCTGCTCCTAGTTTCCACTTGGGGACACAGACCTGTATCATaGGGGTGTTGCTTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: PGVSGHPSNSLLLVSTWGHRPVS*GCCFWV
Trigger: GACCCAAAAGCAACACCCCCATGATACAGGTCTGTG...TCCCCAAGTGGAAACTAGGAGCAGGGAGTTGCTTGGGTGGCCGCTAACACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CCTGGTGTTAGCGGCCACCCAAGCAACTCCCTGCTCCTAGTTTCCACTTGGGGAGCATTCCTTTCTCATTaGTGCCGCCTGACCACAGAA +
Preference number: 4 (lower is better)
Translates to: PGVSGHPSNSLLLVSTWGAFLSH*CRLTTE
Trigger: TTCTGTGGTCAGGCGGCACCAATGAGAAAGGAATGC...TCCCCAAGTGGAAACTAGGAGCAGGGAGTTGCTTGGGTGGCCGCTAACACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp GACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACACAGAGAAGGAGGCCATaGGTAGGCTCGAAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: DRCQCALPGGCGSTYRHTQRRRP*VGSKSP
Trigger: GGGACTCTTCGAGCCTACCCATGGCCTCCTTCTCTG...TGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435314.5
CDS-3UTR TCA 90 bp ACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACATGTACCTCGGAGCCTCTaGAGAAGGGTGGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TGVSVLFQVVADPPIGIHVPRSL*RRVVGS
Trigger: GGAACCTACCACCCTTCTTCAGAGGCTCCGAGGTAC...ATGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421986.5
CDS-3UTR TCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCATCCAGTGGTGGGTCCTaGGGGGAGCTGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSSSGGS*GELKVE
Trigger: CTCTACCTTCAGCTCCCCTCAGGACCCACCACTGGA...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGAACAGTACCATCTCCCTaGCCCTGGGCAAGTACTGCC +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRTVPSP*PWASTA
Trigger: GGCAGTACTTGCCCAGGGTCAGGGAGATGGTACTGT...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp CCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACCCCAGGGTATCAAGCTaGAAAGGTCAGAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PAVLSPDTYDKMLPPGGYPRVSS*KGQRQQ
Trigger: TTGCTGCCTCTGACCTTTTCAGCTTGATACCCTGGG...GTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp AACCCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGAGAACTGGCAATAGGGTaGGAGGGAAGCAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: NPAVLSPDTYDKMLPPGGELAIG*EGSRNE
Trigger: CTCATTCCTGCTTCCCTCTCACCCTATTGCCAGTTC...TCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp GTGTACTTGGCTCTGAGCTTTTGTCTCCAGTGGTGGGTCCTGAGGGGAGCTGAATCTGCCATCCCGGCATaGGGGCTTCTCCGAAAATTA +
Preference number: 4 (lower is better)
Translates to: VYLALSFCLQWWVLRGAESAIPA*GLLRKL
Trigger: TAATTTTCGGAGAAGCCCTCATGCCGGGATGGCAGA...TTCAGCTCCCCTCAGGACCCACCACTGGAGACAAAAGCTCAGAGCCAAGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR GCA 90 bp GCTTTGGCAGACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATGCTCTTCCAGGTGGTTaGGGATCCACCTATAGGCAT +
Preference number: 4 (lower is better)
Translates to: ALADRCQCALPGGCGSTYALPGG*GSTYRH
Trigger: ATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGC...ATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTCTGCCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR GCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGACGGGCAGAGATGAGATaGTGCTGTAGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRRAEMR*CCSRKR
Trigger: CCGCTTCCTGCTACAGCAGCATCTCATCTCTGCCCG...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTACTTCCGCTCTCCACGTaGGAGAGGACCGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLLPLST*ERTGPS
Trigger: ACTGGGGCCGGTCCTCTCGCACGTGGAGAGCGGAAG...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp CCTGGTGTTAGCGGCCACCCAAGCAACTCCCTGCTCCTAGTTTCCACTTGGGGACTCTATATCCTGCTTTaGTGCTTTAGCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PGVSGHPSNSLLLVSTWGLYILL*CFSWWS
Trigger: GCTCCACCAGCTAAAGCAGCAAAGCAGGATATAGAG...TCCCCAAGTGGAAACTAGGAGCAGGGAGTTGCTTGGGTGGCCGCTAACACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp AACCCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGAAAGTCCAGGCAGGGGTaGCATAGACACCAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: NPAVLSPDTYDKMLPPGGKSRQG*HRHQGL
Trigger: AAGACCTTGGTGTCTATGCCACCCCTGCCTGGACTT...TCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGCTGGGCCAGTCTCTCTaGCTTCTTGTGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQLGQSL*LLVGST
Trigger: GGTGGAGCCCACAAGAAGCCAGAGAGACTGGCCCAG...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCATGCTGCTTTAGCTGGTaGAGCCTGCCCACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSCCFSW*SLPTGL
Trigger: GAGGCCAGTGGGCAGGCTCCACCAGCTAAAGCAGCA...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp AACCCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGAGGTCAAGTCTTCACCTaGAGCCAGCACTACCTATGG +
Preference number: 4 (lower is better)
Translates to: NPAVLSPDTYDKMLPPGGGQVFT*SQHYLW
Trigger: CCATAGGTAGTGCTGGCTCCAGGTGAAGACTTGACC...TCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGACAGATCGGGCAGAGATaGGATGCTGCTGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRQIGQR*DAAVAG
Trigger: TCCTGCTACAGCAGCATCTCATCTCTGCCCGATCTG...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTAGTTGCCTTCCCCTCCTaGGCCCCATGTCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLVAFPS*APCLPW
Trigger: CCATGGGAGACATGGGGCTCAGGAGGGGAAGGCAAC...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp TTCCAGGTGGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTGCTCAGCTTGCTCGGAGCCTCTaGAGAAGGGTGGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: FQVVADPPIGIHVLLIAQLARSL*RRVVGS
Trigger: GGAACCTACCACCCTTCTTCAGAGGCTCCGAGCAAG...CTGAGCAATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435314.5
CDS-3UTR GCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCATTTCAGGATCCGCTCTaGCCAGTCACAGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSFQDPL*PVTGQG
Trigger: GCCCTGACCTGTGACTGGGCAGAGCGGATCCTGAAA...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTCCCTCTACTTTGTTCTaGACGGCCTTGCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: VLFQVVADPPIGIHVLLIPSTLF*TALLGA
Trigger: GGCTCCGAGCAAGGCCGTGCAGAACAAAGTAGAGGG...AATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435314.5
CDS-3UTR CCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGGTTGGCTGTGCTGAGTaGGCGGCAACAGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQVGCAE*AATGKT
Trigger: AGTCTTGCCTGTTGCCGCCCACTCAGCACAGCCAAC...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGCTGGGCCAGTCTCTCTaGCTTCTTGTGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSELGQSL*LLVGST
Trigger: GGTGGAGCCCACAAGAAGCCAGAGAGACTGGCCCAG...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCAGTGGAGCCTGCCCACTaGCCTCACTCACAGGTACTT +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSVEPAH*PHSQVL
Trigger: AAGTACCTGTGAGTGAGGCCAGTGGGCAGGCTCCAC...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACATTCTGCACGGCGAAATaGTACCTCGGAGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: DRCQCALPGGCGSTYRHTFCTAK*YLGASE
Trigger: TTCAGAGGCTCCGAGGTACCATTTCGCCGTGCAGAA...TGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421986.5
CDS-3UTR TCA 90 bp AACCCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATCTGCCCCACCTTTCTaGAGTCTCCTAAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: NPAVLSPDTYDKMLPPGGSAPPF*SLLNLE
Trigger: TTCCAGATTTAGGAGACTTCAGAAAGGTGGGGCAGA...TCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp GCTTTGGCAGACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATTCTGCCCCACCTTTCTaGAGTCTCCTAAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: ALADRCQCALPGGCGSTYSAPPF*SLLNLE
Trigger: TTCCAGATTTAGGAGACTTCAGAAAGGTGGGGCAGA...ATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTCTGCCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR TCA 90 bp TTGGCAGACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGTCTGCCCCACCTTTCTaGAGTCTCCTAAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: LADRCQCALPGGCGSTYRSAPPF*SLLNLE
Trigger: TTCCAGATTTAGGAGACTTCAGAAAGGTGGGGCAGA...CCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTCTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR TCA 90 bp GGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGGTGGTACCTCGGAGCCTCTaGAGAAGGGTGGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GVRLKKDLRNYLTRPGTVVPRSL*RRVVGS
Trigger: GGAACCTACCACCCTTCTTCAGAGGCTCCGAGGTAC...CACCGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR TCA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGCAAAGTTGGCTGTGCTaGGTGGGCGGCAACAGGCAA +
Preference number: 4 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSEQSWLC*VGGNRQ
Trigger: TTGCCTGTTGCCGCCCACTCAGCACAGCCAACTTTG...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGACAGTACCATCTCCCTaGCCCTGGGCAAGTACTGCC +
Preference number: 4 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSETVPSP*PWASTA
Trigger: GGCAGTACTTGCCCAGGGTCAGGGAGATGGTACTGT...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp CCTGGTGTTAGCGGCCACCCAAGCAACTCCCTGCTCCTAGTTTCCACTTGGGGATGTGGTGGAAATAAATaGACACATGAAGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PGVSGHPSNSLLLVSTWGCGGNK*THEVSL
Trigger: CAGGGAGACTTCATGTGTTCATTTATTTCCACCACA...TCCCCAAGTGGAAACTAGGAGCAGGGAGTTGCTTGGGTGGCCGCTAACACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp AACCCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGACCCTCTACTTTGTTCTaGACGGCCTTGGAAATGGTA +
Preference number: 4 (lower is better)
Translates to: NPAVLSPDTYDKMLPPGGPSTLF*TALEMV
Trigger: TACCATTTCCAAGGCCGTGCAGAACAAAGTAGAGGG...TCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGAGACAGGTGTCAGTGTaGTCTTCCAGGTGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQRQVSV*SSRWLR
Trigger: CCGCAACCACCTGGAAGAGCACACTGACACCTGTCT...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GCGGATCCACCTATAGGCATACATGTACTCCTCATTGCTCAGTGTACTTGGCTCAGACAGGTGTCAGTGTaGTCTTCCAGGTGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: ADPPIGIHVLLIAQCTWLRQVSV*SSRWLR
Trigger: CCGCAACCACCTGGAAGAGCACACTGACACCTGTCT...GAGCCAAGTACACTGAGCAATGAGGAGTACATGTATGCCTATAGGTGGATCCGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR GCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCACAGTTCATCTCGAGGTaGTGGGGTTACTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSQFISR*WGYFWA
Trigger: GGCCCAGAAGTAACCCCAGCACCTCGAGATGAACTG...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGCGGGCAGAGATGAGATaGTGCTGTAGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSERAEMR*CCSRKR
Trigger: CCGCTTCCTGCTACAGCAGCATCTCATCTCTGCCCG...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGCTTCCGCTCTCCACGTaGGAGAGGACCGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQLPLST*ERTGPS
Trigger: ACTGGGGCCGGTCCTCTCGCACGTGGAGAGCGGAAG...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCTTCCGCTCTCCACGTaGGAGAGGACCGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRLPLST*ERTGPS
Trigger: ACTGGGGCCGGTCCTCTCGCACGTGGAGAGCGGAAG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR GCA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATACACAGCTGCTGGGGGTaGCCCGGCCCTACTAGACAG +
Preference number: 4 (lower is better)
Translates to: QDSLTEATLCRGQSRSSIHSCWG*PGPTRQ
Trigger: CTGTCTAGTAGGGCCGGGGCACCCCCAGCAGCTGTG...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGCACAGCTGCTGGGGGTaGCCCGGCCCTACTAGACAG +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQHSCWG*PGPTRQ
Trigger: CTGTCTAGTAGGGCCGGGGCACCCCCAGCAGCTGTG...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCACACAGCTGCTGGGGGTaGCCCGGCCCTACTAGACAG +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAHSCWG*PGPTRQ
Trigger: CTGTCTAGTAGGGCCGGGGCACCCCCAGCAGCTGTG...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp AACCCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGAACACGTATGACAAGATaGTGCCACCTGGTGGATACA +
Preference number: 4 (lower is better)
Translates to: NPAVLSPDTYDKMLPPGGTRMTR*CHLVDT
Trigger: TGTATCCACCAGGTGGCAGCATCTTGTCATACGTGT...TCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp TTCCAGGTGGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTGCTCAGATCAGGCTCATCTTCTaGCATCCCGGCATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: FQVVADPPIGIHVLLIAQIRLIF*HPGMRA
Trigger: AGCCCTCATGCCGGGATGGCAGAAGATGAGCCTGAT...CTGAGCAATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR GCA 90 bp GTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTATCAGGCTCATCTTCTaGCATCCCGGCATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VLFQVVADPPIGIHVLLIIRLIF*HPGMRA
Trigger: AGCCCTCATGCCGGGATGGCAGAAGATGAGCCTGAT...AATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGTGTTCTGCACGGCCTTaGAAATGGTACCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQCSARP*KWYLGA
Trigger: GGCTCCGAGGTACCATTTCCAAGGCCGTGCAGAACA...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGATTTTGTCTCCAGTGGTaGGTCCTGAGGGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRFCLQW*VLRGAE
Trigger: TTCAGCTCCCCTCAGGACCCACCACTGGAGACAAAA...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGATGCTGGGGTTACTTCTaGGCCCATTTCTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRCWGYF*AHFWTL
Trigger: GAGAGTCCAGAAATGGGCCCAGAAGTAACCCCAGCA...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGATTCATCTCGAGGTGCTaGGGTTACTTCTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRFISRC*GYFWAH
Trigger: ATGGGCCCAGAAGTAACCCCAGCACCTCGAGATGAA...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGAATGGCCTTAAGCACATaGGCATGTGCAGATCGGGCA +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRMALST*ACADRA
Trigger: TGCCCGATCTGCACATGCCCATGTGCTTAAGGCCAT...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGAAGTGATTGGTCAGGGTaGACATGTGACCCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRSDWSG*TCDPGL
Trigger: TAGGCCTGGGTCACATGTCCACCCTGACCAATCACT...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CTCAGTGTACTTGGCTCTGAGCTTTTGTCTCCAGTGGTGGGTCCTGAGGGGAGCAACATTGCATATGCCTaGGAGGTCAGAAAGGATACG +
Preference number: 4 (lower is better)
Translates to: LSVLGSELLSPVVGPEGSNIAYA*EVRKDT
Trigger: CGTATCCTTTCTGACCTCCCAGGCATATGCAATGTT...GCTCCCCTCAGGACCCACCACTGGAGACAAAAGCTCAGAGCCAAGTACACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435314.5
CDS-3UTR TCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTAGTACCTCGGAGCCTCTaGAGAAGGGTGGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLVPRSL*RRVVGS
Trigger: GGAACCTACCACCCTTCTTCAGAGGCTCCGAGGTAC...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGCTTCAGCTGTCCTCTTaGCACCCTTGTCATGTGGTC +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQLQLSS*HPCHVV
Trigger: GACCACATGACAAGGGTGTCAAGAGGACAGCTGAAG...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCACTTCAGCTGTCCTCTTaGCACCCTTGTCATGTGGTC +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSLQLSS*HPCHVV
Trigger: GACCACATGACAAGGGTGTCAAGAGGACAGCTGAAG...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAGTTGCCTTCCCCTCCTaGGCCCCATGTCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAVAFPS*APCLPW
Trigger: CCATGGGAGACATGGGGCTCAGGAGGGGAAGGCAAC...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCAGAACTGGCAATAGGGTaGGAGGGAAGCAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSELAIG*EGSRNE
Trigger: CTCATTCCTGCTTCCCTCTCACCCTATTGCCAGTTC...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp GTGTACTTGGCTCTGAGCTTTTGTCTCCAGTGGTGGGTCCTGAGGGGAGCTGAAAAATCTGGAAAACTCTaGACAGTCGCCTTCCAACAC +
Preference number: 4 (lower is better)
Translates to: VYLALSFCLQWWVLRGAEKSGKL*TVAFQH
Trigger: GTGTTGGAAGGCGACTGTTCAGAGTTTTCCAGATTT...TTCAGCTCCCCTCAGGACCCACCACTGGAGACAAAAGCTCAGAGCCAAGTACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000421986.5
CDS-3UTR TCA 90 bp GGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGGTGAAGGCCAAGGCAGGCTaGTCACAAGGTCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: GVRLKKDLRNYLTRPGTVKAKAG*SQGQEI
Trigger: GATCTCCTGACCTTGTGATCAGCCTGCCTTGGCCTT...CACCGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR TCA 90 bp GAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGAAGGCCAAGGCAGGCTaGTCACAAGGTCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: EGVRLKKDLRNYLTRPGTKAKAG*SQGQEI
Trigger: GATCTCCTGACCTTGTGATCAGCCTGCCTTGGCCTT...CGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR GCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGGCTCTTCCAGGTGGTTaGGGATCCACCTATAGGCAT +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQALPGG*GSTYRH
Trigger: ATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGC...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTGCTCTTCCAGGTGGTTaGGGATCCACCTATAGGCAT +
Preference number: 4 (lower is better)
Translates to: VLFQVVADPPIGIHVLLIALPGG*GSTYRH
Trigger: ATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGC...AATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR GCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTACGGGCAGAGATGAGATaGTGCTGTAGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLRAEMR*CCSRKR
Trigger: CCGCTTCCTGCTACAGCAGCATCTCATCTCTGCCCG...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGAAGCACATGGGCATGTaGAGATCGGGCAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQKHMGM*RSGRDE
Trigger: CTCATCTCTGCCCGATCTGCACATGCCCATGTGCTT...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGACTTGGTCACCACCTATaGCTACCTCTCTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRLGHHL*LPLCSL
Trigger: CAGAGAACAGAGAGGTAGGCATAGGTGGTGACCAAG...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTAGCTGGTGGAGCCTaGCCACTGGCCTCACTCACA +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLLAGGA*PLASLT
Trigger: TGTGAGTGAGGCCAGTGGGCAGGCTCCACCAGCTAA...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGATCAGGCTCATCTTCTaGCATCCCGGCATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: EGVRLKKDLRNYLTRPGTIRLIF*HPGMRA
Trigger: AGCCCTCATGCCGGGATGGCAGAAGATGAGCCTGAT...CGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452456.1
CDS-3UTR CCA 90 bp GAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGGCACGGCCTTGGAAATaGTACCTCGGAGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: EGVRLKKDLRNYLTRPGTARPWK*YLGASE
Trigger: TTCAGAGGCTCCGAGGTACCATTTCCAAGGCCGTGC...CGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR CCA 90 bp GAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGTGTTCTGCACGGCCTTaGAAATGGTACCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: EGVRLKKDLRNYLTRPGTCSARP*KWYLGA
Trigger: GGCTCCGAGGTACCATTTCCAAGGCCGTGCAGAACA...CGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR CCA 90 bp GTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTTTTTGTCTCCAGTGGTaGGTCCTGAGGGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: VLFQVVADPPIGIHVLLIFCLQW*VLRGAE
Trigger: TTCAGCTCCCCTCAGGACCCACCACTGGAGACAAAA...AATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CCA 90 bp TGGTGGGTCCTGAGGGGAGCTGAAGGTAGAGATACAGCTTGTCATTGTCAGAAATTTTGTCTCCAGTGGTaGGTCCTGAGGGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: WWVLRGAEGRDTACHCQKFCLQW*VLRGAE
Trigger: TTCAGCTCCCCTCAGGACCCACCACTGGAGACAAAA...TTTCTGACAATGACAAGCTGTATCTCTACCTTCAGCTCCCCTCAGGACCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTAGTTGGCTGTGCTGAGTaGGCGGCAACAGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLVGCAE*AATGKT
Trigger: AGTCTTGCCTGTTGCCGCCCACTCAGCACAGCCAAC...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATGGCCTTAAGCACATaGGCATGTGCAGATCGGGCA +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQMALST*ACADRA
Trigger: TGCCCGATCTGCACATGCCCATGTGCTTAAGGCCAT...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGATTGTCATGTGGTCCTTaGTCACCACCTATGCCTACC +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRLSCGP*SPPMPT
Trigger: GGTAGGCATAGGTGGTGACCAAGGACCACATGACAA...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCAGGTAACCTTGAGGACTaGGCAGATTCCATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSGNLED*ADSMAA
Trigger: AGCTGCCATGGAATCTGCCCAGTCCTCAAGGTTACC...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTTCCAGTGGTGGGTCCTaGGGGGAGCTGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVSSGGS*GELKVE
Trigger: CTCTACCTTCAGCTCCCCTCAGGACCCACCACTGGA...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGTCCAGTGGTGGGTCCTaGGGGGAGCTGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQSSGGS*GELKVE
Trigger: CTCTACCTTCAGCTCCCCTCAGGACCCACCACTGGA...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGCTTCAGCTGTCCTCTTaGCACCCTTGTCATGTGGTC +
Preference number: 4 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSELQLSS*HPCHVV
Trigger: GACCACATGACAAGGGTGTCAAGAGGACAGCTGAAG...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCATCCTCCTGGCCACAGTaGTTGGTCAGGGTGGACATG +
Preference number: 4 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSSSWPQ*LVRVDM
Trigger: CATGTCCACCCTGACCAATCACTGTGGCCAGGAGGA...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp CCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACTGTGGTGGAAATAAATaGACACATGAAGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PAVLSPDTYDKMLPPGGYCGGNK*THEVSL
Trigger: CAGGGAGACTTCATGTGTTCATTTATTTCCACCACA...GTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp GAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGTCTGCCATCCCGGCATaGGGGCTTCTCCGAAAATTA +
Preference number: 4 (lower is better)
Translates to: EGVRLKKDLRNYLTRPGTSAIPA*GLLRKL
Trigger: TAATTTTCGGAGAAGCCCTCATGCCGGGATGGCAGA...CGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452456.1
CDS-3UTR GCA 90 bp CCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGGTCTTCCTCCTTATaGCACTGTAGCAATATTTGG +
Preference number: 4 (lower is better)
Translates to: PAVLSPDTYDKMLPPGGYRSSSL*HCSNIW
Trigger: CCAAATATTGCTACAGTGGCATAAGGAGGAAGACCT...GTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTGGTCAGGGCACACGCTaGCTCCACCAGTTCATCTCG +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVGQGTR*LHQFIS
Trigger: CGAGATGAACTGGTGGAGGCAGCGTGTGCCCTGACC...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGGGTCAGGGCACACGCTaGCTCCACCAGTTCATCTCG +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRGQGTR*LHQFIS
Trigger: CGAGATGAACTGGTGGAGGCAGCGTGTGCCCTGACC...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR GCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGCTTGGTCACCACCTATaGCTACCTCTCTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQLGHHL*LPLCSL
Trigger: CAGAGAACAGAGAGGTAGGCATAGGTGGTGACCAAG...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGACTCTATATCCTGCTTTaGTGCTTTAGCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRLYILL*CFSWWS
Trigger: GCTCCACCAGCTAAAGCAGCAAAGCAGGATATAGAG...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGACGTATGACAAGATGCTaGCACCTGGTGGATACAGAA +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRRMTRC*HLVDTE
Trigger: TTCTGTATCCACCAGGTGGCAGCATCTTGTCATACG...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp GAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGGGCCCAGCCGGCTCGTaGGTTGCTTTATTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: EGVRLKKDLRNYLTRPGTGPAGS*VALFSF
Trigger: AAAGGAAAATAAAGCAACGCACGAGCCGGCTGGGCC...CGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444392.5
CDS-3UTR GCA 90 bp GCTTTGGCAGACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATAAATCTGGAAAACATTaGATATGCCTGGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: ALADRCQCALPGGCGSTYKSGKH*ICLGGQ
Trigger: CTGACCTCCCAGGCATATGCAATGTTTTCCAGATTT...ATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTCTGCCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435314.5
CDS-3UTR CCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTAGCACGGCCTTGGAAATaGTACCTCGGAGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLARPWK*YLGASE
Trigger: TTCAGAGGCTCCGAGGTACCATTTCCAAGGCCGTGC...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CTTGAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCGCACGGCCTTGGAAATaGTACCTCGGAGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LEGVRLKKDLRNYLTRPGARPWK*YLGASE
Trigger: TTCAGAGGCTCCGAGGTACCATTTCCAAGGCCGTGC...GCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACCCTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR CCA 90 bp CTTGAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCTGTTCTGCACGGCCTTaGAAATGGTACCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LEGVRLKKDLRNYLTRPGCSARP*KWYLGA
Trigger: GGCTCCGAGGTACCATTTCCAAGGCCGTGCAGAACA...GCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACCCTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCTGGGCCAGTCTCTCTaGCTTCTTGTGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRLGQSL*LLVGST
Trigger: GGTGGAGCCCACAAGAAGCCAGAGAGACTGGCCCAG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTAAGATCCTTAGGAGGCTaGGCCAGTCTCTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLRSLGG*ASLSGF
Trigger: GAAGCCAGAGAGACTGGCCCAGCCTCCTAAGGATCT...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGGGGGGCCAGAATAGGTaGAGAGACTGGGATTGGCGG +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQGGQNR*RDWDWR
Trigger: CCGCCAATCCCAGTCTCTCCACCTATTCTGGCCCCC...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATAGGGGGCCAGAATAGGTaGAGAGACTGGGATTGGCGG +
Preference number: 4 (lower is better)
Translates to: QDSLTEATLCRGQSRSSIGGQNR*RDWDWR
Trigger: CCGCCAATCCCAGTCTCTCCACCTATTCTGGCCCCC...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCAGACACCCTTGTCATGTaGTCCTTGGTCACCACCTAT +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSDTLVM*SLVTTY
Trigger: ATAGGTGGTGACCAAGGACCACATGACAAGGGTGTC...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCATGCTGCTTTAGCTGGTaGAGCCTGCCCACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEACCFSW*SLPTGL
Trigger: GAGGCCAGTGGGCAGGCTCCACCAGCTAAAGCAGCA...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTTGCTGCTTTAGCTGGTaGAGCCTGCCCACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVCCFSW*SLPTGL
Trigger: GAGGCCAGTGGGCAGGCTCCACCAGCTAAAGCAGCA...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGGGCCCCTTCCTCCTTTaGAAACAGTACCATCTCCCT +
Preference number: 4 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSEGPFLL*KQYHLP
Trigger: AGGGAGATGGTACTGTTTCCAAAGGAGGAAGGGGCC...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAGCTTCTTTGGTATGCTaGGAACCGGGGCCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSASLVC*EPGPLP
Trigger: AGGAAGGGGCCCCGGTTCCCAGCATACCAAAGAAGC...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCATGGGGGTGTTGCTTTTaGGTCTTTATGCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSWGCCF*VFMLLG
Trigger: TCCCAGGAGCATAAAGACCCAAAAGCAACACCCCCA...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGCTGGCAGCCATTAAGTaGCCCAGACTTAAATGGTCC +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQLAAIK*PRLKWS
Trigger: GGACCATTTAAGTCTGGGCCACTTAATGGCTGCCAG...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACCAAGATGCTGCCACCTaGTGGATACAGAATAGATTT +
Preference number: 4 (lower is better)
Translates to: PAVLSPDTYDKMLPPGGYQDAAT*WIQNRF
Trigger: AAATCTATTCTGTATCCACCAGGTGGCAGCATCTTG...GTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR CAA 72 bp CAAGGATACATCTGGAGGGTCTGCATTCCTTTCTCATaGGTGCCGCCTGACCACAGAACTAGCTTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: QGYIWRVCIPFS*VPPDHRTSFFR
Trigger: ACGGAAAAAGCTAGTTCTGTGGTCAGGCGGCACCAATGAGAAAGGAATGCAGACCCTCCAGATGTATCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
3UTR CAA 72 bp TCGAAGAGTCCCGATAGGCATCATAAACACTTTGCTTaGGCAGACAGGTGTCAGTGTGCTCTTCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SKSPDRHHKHFA*ADRCQCALPGG
Trigger: ACCACCTGGAAGAGCACACTGACACCTGTCTGCCAAAGCAAAGTGTTTATGATGCCTATCGGGACTCTTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435314.5
CDS-3UTR TCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTGTACCTCGGAGCCTCTaGAGAAGGGTGGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVVPRSL*RRVVGS
Trigger: GGAACCTACCACCCTTCTTCAGAGGCTCCGAGGTAC...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGGTACCTCGGAGCCTCTaGAGAAGGGTGGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQVPRSL*RRVVGS
Trigger: GGAACCTACCACCCTTCTTCAGAGGCTCCGAGGTAC...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCAAAGTTGGCTGTGCTaGGTGGGCGGCAACAGGCAA +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRQSWLC*VGGNRQ
Trigger: TTGCCTGTTGCCGCCCACTCAGCACAGCCAACTTTG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR TCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTACCTCAACGATGGAACTaGAGGACCGTTTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLPQRWN*RTVSGS
Trigger: GGATCCTGAAACGGTCCTTCAGTTCCATCGTTGAGG...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAACAGTACCATCTCCCTaGCCCTGGGCAAGTACTGCC +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEATVPSP*PWASTA
Trigger: GGCAGTACTTGCCCAGGGTCAGGGAGATGGTACTGT...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp GAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGACCTTAGAAATTATTTaGCAAGGCCGGGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: EGVRLKKDLRNYLTRPGTTLEII*QGRARW
Trigger: CCACCGTGCCCGGCCTTGTCAAATAATTTCTAAGGT...CGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR TCA 90 bp GGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGGTGACCTTAGAAATTATTTaGCAAGGCCGGGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: GVRLKKDLRNYLTRPGTVTLEII*QGRARW
Trigger: CCACCGTGCCCGGCCTTGTCAAATAATTTCTAAGGT...CACCGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR GCA 90 bp CCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAATTTCTGTACATCTTaGAGGATCCCCTCTACTTTG +
Preference number: 4 (lower is better)
Translates to: PAVLSPDTYDKMLPPGGYNFCTS*RIPSTL
Trigger: CAAAGTAGAGGGGATCCTGCAAGATGTACAGAAATT...GTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGGTCAGGGCACACGCTaGCTCCACCAGTTCATCTCG +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSGQGTR*LHQFIS
Trigger: CGAGATGAACTGGTGGAGGCAGCGTGTGCCCTGACC...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCTTTCAGGATCCGCTCTaGCCAGTCACAGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPFQDPL*PVTGQG
Trigger: GCCCTGACCTGTGACTGGGCAGAGCGGATCCTGAAA...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTTTCAGGATCCGCTCTaGCCAGTCACAGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRFQDPL*PVTGQG
Trigger: GCCCTGACCTGTGACTGGGCAGAGCGGATCCTGAAA...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR GCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAGCAGAGATGAGATGCTaGTGTAGCAGGAAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAAEMRC*CSRKRA
Trigger: CGCCCGCTTCCTGCTACAGCAGCATCTCATCTCTGC...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGGCAGAGATGAGATGCTaGTGTAGCAGGAAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRAEMRC*CSRKRA
Trigger: CGCCCGCTTCCTGCTACAGCAGCATCTCATCTCTGC...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR GCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGGCAGAGATGAGATGCTaGTGTAGCAGGAAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQAEMRC*CSRKRA
Trigger: CGCCCGCTTCCTGCTACAGCAGCATCTCATCTCTGC...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCGGGCAGAGATGAGATaGTGCTGTAGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRRAEMR*CCSRKR
Trigger: CCGCTTCCTGCTACAGCAGCATCTCATCTCTGCCCG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR GCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTAAAGCACATGGGCATGTaGAGATCGGGCAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLKHMGM*RSGRDE
Trigger: CTCATCTCTGCCCGATCTGCACATGCCCATGTGCTT...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTTTAGCTGGTGGAGCCTaGCCACTGGCCTCACTCACA +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVLAGGA*PLASLT
Trigger: TGTGAGTGAGGCCAGTGGGCAGGCTCCACCAGCTAA...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCATTAGCTGGTGGAGCCTaGCCACTGGCCTCACTCACA +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEALAGGA*PLASLT
Trigger: TGTGAGTGAGGCCAGTGGGCAGGCTCCACCAGCTAA...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCATATATCCTGCTTTGCTaGTTTAGCTGGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSYILLC*FSWWSL
Trigger: CAGGCTCCACCAGCTAAAGCAGCAAAGCAGGATATA...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCACCCTGGGCAAGTACTaGCCCCTTTTCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPTLGKY*PLFSLS
Trigger: GGAGAGGCTGAAAAGGGGGCAGTACTTGCCCAGGGT...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACCCTGGGCAAGTACTaGCCCCTTTTCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVTLGKY*PLFSLS
Trigger: GGAGAGGCTGAAAAGGGGGCAGTACTTGCCCAGGGT...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp CCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACGGGAATTTTATCTTCTaGTTCTTTGGTATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PAVLSPDTYDKMLPPGGYGNFIF*FFGMLG
Trigger: TCCCAGCATACCAAAGAAGCAGAAGATAAAATTCCC...GTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGTTCCTTTCTCATTGGTaGCGCCTGACCACAGAACTA +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQFLSHW*RLTTEL
Trigger: TAGTTCTGTGGTCAGGCGGCACCAATGAGAAAGGAA...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTAGGCCCAGCCGGCTCGTaGGTTGCTTTATTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLGPAGS*VALFSF
Trigger: AAAGGAAAATAAAGCAACGCACGAGCCGGCTGGGCC...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368870.6
CDS-3UTR GCA 90 bp GTGTACTTGGCTCTGAGCTTTTGTCTCCAGTGGTGGGTCCTGAGGGGAGCTGAAGATACGAACATATTCTaGCCTTCTAGGCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: VYLALSFCLQWWVLRGAEDTNIF*PSRLGK
Trigger: TTTTCCAAGCCTAGAAGGGCAGAATATGTTCGTATC...TTCAGCTCCCCTCAGGACCCACCACTGGAGACAAAAGCTCAGAGCCAAGTACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435314.5
CDS-3UTR CCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCATGTTCTGCACGGCCTTaGAAATGGTACCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSCSARP*KWYLGA
Trigger: GGCTCCGAGGTACCATTTCCAAGGCCGTGCAGAACA...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCGTTGGCTGTGCTGAGTaGGCGGCAACAGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPVGCAE*AATGKT
Trigger: AGTCTTGCCTGTTGCCGCCCACTCAGCACAGCCAAC...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGGTTGGCTGTGCTGAGTaGGCGGCAACAGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRVGCAE*AATGKT
Trigger: AGTCTTGCCTGTTGCCGCCCACTCAGCACAGCCAAC...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTACACTGTAGCAATATTTaGACTGGCCCCGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLHCSNI*TGPGHQ
Trigger: TTGGTGGCCGGGGCCAGTCCAAATATTGCTACAGTG...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTAAAGTCCAGGCAGGGGTaGCATAGACACCAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLKSRQG*HRHQGL
Trigger: AAGACCTTGGTGTCTATGCCACCCCTGCCTGGACTT...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTCATCTCGAGGTGCTaGGGTTACTTCTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLFISRC*GYFWAH
Trigger: ATGGGCCCAGAAGTAACCCCAGCACCTCGAGATGAA...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCACTGGGCCAGTCTCTCTaGCTTCTTGTGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSLGQSL*LLVGST
Trigger: GGTGGAGCCCACAAGAAGCCAGAGAGACTGGCCCAG...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAAGATCCTTAGGAGGCTaGGCCAGTCTCTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSRSLGG*ASLSGF
Trigger: GAAGCCAGAGAGACTGGCCCAGCCTCCTAAGGATCT...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCACAGGTTATTGGCTCCTaGGGCCGAGCTCTCAACTAC +
Preference number: 4 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSQVIGS*GRALNY
Trigger: GTAGTTGAGAGCTCGGCCCCAGGAGCCAATAACCTG...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATAGTGGAGCCTGCCCACTaGCCTCACTCACAGGTACTT +
Preference number: 4 (lower is better)
Translates to: QDSLTEATLCRGQSRSSIVEPAH*PHSQVL
Trigger: AAGTACCTGTGAGTGAGGCCAGTGGGCAGGCTCCAC...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCTTTGCTGCTTTAGCTaGTGGAGCCTGCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRLCCFS*WSLPTG
Trigger: GCCAGTGGGCAGGCTCCACCAGCTAAAGCAGCAAAG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTAGGCCCCTTCCTCCTTTaGAAACAGTACCATCTCCCT +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLGPFLL*KQYHLP
Trigger: AGGGAGATGGTACTGTTTCCAAAGGAGGAAGGGGCC...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATAGCTTCTTTGGTATGCTaGGAACCGGGGCCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QDSLTEATLCRGQSRSSIASLVC*EPGPLP
Trigger: AGGAAGGGGCCCCGGTTCCCAGCATACCAAAGAAGC...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCGCTTCTTTGGTATGCTaGGAACCGGGGCCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPASLVC*EPGPLP
Trigger: AGGAAGGGGCCCCGGTTCCCAGCATACCAAAGAAGC...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
3UTR CAA 72 bp CACAGTACTTCCGATAGGCATCATAAACACTTTGCTTaGGCAGACAGGTGTCAGTGTGCTCTTCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: HSTSDRHHKHFA*ADRCQCALPGG
Trigger: ACCACCTGGAAGAGCACACTGACACCTGTCTGCCAAAGCAAAGTGTTTATGATGCCTATCGGAAGTACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421986.5
CDS-3UTR TCA 90 bp GAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGTCTGCCCCACCTTTCTaGAGTCTCCTAAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: EGVRLKKDLRNYLTRPGTSAPPF*SLLNLE
Trigger: TTCCAGATTTAGGAGACTTCAGAAAGGTGGGGCAGA...CGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR TCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTACAAGCCTTCGAGCTTTaGTGTCAGGGAAGATCTCTC +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLQAFEL*CQGRSL
Trigger: GAGAGATCTTCCCTGACATCAAAGCTCGAAGGCTTG...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCAGATCGGGCAGAGATaGGATGCTGCTGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRQIGQR*DAAVAG
Trigger: TCCTGCTACAGCAGCATCTCATCTCTGCCCGATCTG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR TCA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGATTCTTTGGTTTAGATaGCCGTTCCCGAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSEILWFR*PFPRCM
Trigger: CATGCACCTCGGGAACGGTCATCTAAACCAAAGAAT...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGGATGACACTCACTTTTaGGGGGACCAAGGGAATTTT +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQDDTHF*GDQGNF
Trigger: AAAATTCCCTTGGTCCCCTCAAAAGTGAGTGTCATC...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCATCCTCCTGGCCACAGTaGTTGGTCAGGGTGGACATG +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSSSWPQ*LVRVDM
Trigger: CATGTCCACCCTGACCAATCACTGTGGCCAGGAGGA...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGGAAAGCAGGTCTAGCTaGTCTCAACTTAGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQESRSS*SQLSKL
Trigger: TAGCTTGCTAAGTTGAGATCAGCTAGACCTGCTTTC...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGAGAACCAAGATTCCCTaGCAGAAGCTACCCTATGTA +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQRTKIP*QKLPYV
Trigger: TACATAGGGTAGCTTCTGTCAGGGAATCTTGGTTCT...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCAAGAACCAAGATTCCCTaGCAGAAGCTACCCTATGTA +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSRTKIP*QKLPYV
Trigger: TACATAGGGTAGCTTCTGTCAGGGAATCTTGGTTCT...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGGTGCGGCATGAGGGCACTTaGCTTCTCCGAAAATTAGAA +
Preference number: 4 (lower is better)
Translates to: GVRLKKDLRNYLTRPGTVRHEGT*LLRKLE
Trigger: TTCTAATTTTCGGAGAAGGCAAGTGCCCTCATGCCG...CACCGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444392.5
CDS-3UTR GCA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCATCAGGCTCATCTTCTaGCATCCCGGCATGAGGGCA +
Preference number: 4 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPIRLIF*HPGMRA
Trigger: TGCCCTCATGCCGGGATGGCAGAAGATGAGCCTGAT...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290524.8
CDS-3UTR GCA 90 bp GACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACAAATTTCTGTACATCTTaGAGGATCCCCTCTACTTTG +
Preference number: 4 (lower is better)
Translates to: DRCQCALPGGCGSTYRHTNFCTS*RIPSTL
Trigger: CAAAGTAGAGGGGATCCTGCAAGATGTACAGAAATT...TGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR GCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAGCTCTTCCAGGTGGTTaGGGATCCACCTATAGGCAT +
Preference number: 4 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSALPGG*GSTYRH
Trigger: ATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGC...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAAGACAGGTGTCAGTGTaGTCTTCCAGGTGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEARQVSV*SSRWLR
Trigger: CCGCAACCACCTGGAAGAGCACACTGACACCTGTCT...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGCAGTTCATCTCGAGGTaGTGGGGTTACTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQQFISR*WGYFWA
Trigger: GGCCCAGAAGTAACCCCAGCACCTCGAGATGAACTG...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCAGTTCATCTCGAGGTaGTGGGGTTACTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRQFISR*WGYFWA
Trigger: GGCCCAGAAGTAACCCCAGCACCTCGAGATGAACTG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR GCA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATACAGTTCATCTCGAGGTaGTGGGGTTACTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QDSLTEATLCRGQSRSSIQFISR*WGYFWA
Trigger: GGCCCAGAAGTAACCCCAGCACCTCGAGATGAACTG...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCATTTCAGGATCCGCTCTaGCCAGTCACAGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSFQDPL*PVTGQG
Trigger: GCCCTGACCTGTGACTGGGCAGAGCGGATCCTGAAA...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGTCTGCTTCTTTGGTATaGTGGGAACCGGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQSASLV*WEPGPL
Trigger: AAGGGGCCCCGGTTCCCAGCATACCAAAGAAGCAGA...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTTCTGCTTCTTTGGTATaGTGGGAACCGGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVSASLV*WEPGPL
Trigger: AAGGGGCCCCGGTTCCCAGCATACCAAAGAAGCAGA...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCTCTGCTTCTTTGGTATaGTGGGAACCGGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPSASLV*WEPGPL
Trigger: AAGGGGCCCCGGTTCCCAGCATACCAAAGAAGCAGA...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGAGCTTTTGGGTCTTTATaGTCCTGGGATAAGGAACTT +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRAFGSL*SWDKEL
Trigger: AAGTTCCTTATCCCAGGAGCATAAAGACCCAAAAGC...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCAGTATCATGGGGGTGTTaGTTTTGGGTCTTTATGCTC +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSVSWGC*FWVFML
Trigger: GAGCATAAAGACCCAAAAGCAACACCCCCATGATAC...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGCGTATGACAAGATGCTaGCACCTGGTGGATACAGAA +
Preference number: 4 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSERMTRC*HLVDTE
Trigger: TTCTGTATCCACCAGGTGGCAGCATCTTGTCATACG...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCATACATCTGGAGGGTCTaGATTCCTTTCTCATTGGTG +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSYIWRV*IPFSLV
Trigger: CACCAATGAGAAAGGAATGCAGACCCTCCAGATGTA...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATAATCAGGCTCATCTTCTaGCATCCCGGCATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QDSLTEATLCRGQSRSSIIRLIF*HPGMRA
Trigger: AGCCCTCATGCCGGGATGGCAGAAGATGAGCCTGAT...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452671.7
CDS-3UTR CCA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCGCACGGCCTTGGAAATaGTACCTCGGAGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPARPWK*YLGASE
Trigger: TTCAGAGGCTCCGAGGTACCATTTCCAAGGCCGTGC...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTTGTTCTGCACGGCCTTaGAAATGGTACCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVCSARP*KWYLGA
Trigger: GGCTCCGAGGTACCATTTCCAAGGCCGTGCAGAACA...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGAGATCCTTAGGAGGCTaGGCCAGTCTCTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRRSLGG*ASLSGF
Trigger: GAAGCCAGAGAGACTGGCCCAGCCTCCTAAGGATCT...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCACAGGTTATTGGCTCCTaGGGCCGAGCTCTCAACTAC +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAQVIGS*GRALNY
Trigger: GTAGTTGAGAGCTCGGCCCCAGGAGCCAATAACCTG...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGCAGGTTATTGGCTCCTaGGGCCGAGCTCTCAACTAC +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQQVIGS*GRALNY
Trigger: GTAGTTGAGAGCTCGGCCCCAGGAGCCAATAACCTG...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCAGGTTATTGGCTCCTaGGGCCGAGCTCTCAACTAC +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRQVIGS*GRALNY
Trigger: GTAGTTGAGAGCTCGGCCCCAGGAGCCAATAACCTG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGTGGAGCCTGCCCACTaGCCTCACTCACAGGTACTT +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSVEPAH*PHSQVL
Trigger: AAGTACCTGTGAGTGAGGCCAGTGGGCAGGCTCCAC...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCACTTTGCTGCTTTAGCTaGTGGAGCCTGCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSLCCFS*WSLPTG
Trigger: GCCAGTGGGCAGGCTCCACCAGCTAAAGCAGCAAAG...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGGTCTTTATTACCCTGTaGTGCAGTGTCTACCTCTCC +
Preference number: 4 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSEVFITL*CSVYLS
Trigger: GGAGAGGTAGACACTGCACCACAGGGTAATAAAGAC...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTACTGGCAGCCATTAAGTaGCCCAGACTTAAATGGTCC +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLLAAIK*PRLKWS
Trigger: GGACCATTTAAGTCTGGGCCACTTAATGGCTGCCAG...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCACAAGCCTTCGAGCTTTaGTGTCAGGGAAGATCTCTC +
Preference number: 4 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSQAFEL*CQGRSL
Trigger: GAGAGATCTTCCCTGACATCAAAGCTCGAAGGCTTG...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCCCTCAACGATGGAACTaGAGGACCGTTTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPPQRWN*RTVSGS
Trigger: GGATCCTGAAACGGTCCTTCAGTTCCATCGTTGAGG...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCCTCAACGATGGAACTaGAGGACCGTTTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRPQRWN*RTVSGS
Trigger: GGATCCTGAAACGGTCCTTCAGTTCCATCGTTGAGG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR TCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTCCTCAACGATGGAACTaGAGGACCGTTTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVPQRWN*RTVSGS
Trigger: GGATCCTGAAACGGTCCTTCAGTTCCATCGTTGAGG...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCACAGATCGGGCAGAGATaGGATGCTGCTGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSQIGQR*DAAVAG
Trigger: TCCTGCTACAGCAGCATCTCATCTCTGCCCGATCTG...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTAATTCTTTGGTTTAGATaGCCGTTCCCGAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLILWFR*PFPRCM
Trigger: CATGCACCTCGGGAACGGTCATCTAAACCAAAGAAT...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCATGGGATAAGGAACTTTaGAGCACATGCTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSWDKEL*STCSFK
Trigger: CTTAAAGGAGCATGTGCTTCAAAGTTCCTTATCCCA...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGTGGGATAAGGAACTTTaGAGCACATGCTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQWDKEL*STCSFK
Trigger: CTTAAAGGAGCATGTGCTTCAAAGTTCCTTATCCCA...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCACCCAGGGTATCAAGCTaGAAAGGTCAGAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAPRVSS*KGQRQQ
Trigger: TTGCTGCCTCTGACCTTTTCAGCTTGATACCCTGGG...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCCCAGGGTATCAAGCTaGAAAGGTCAGAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRPRVSS*KGQRQQ
Trigger: TTGCTGCCTCTGACCTTTTCAGCTTGATACCCTGGG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR TCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTTCTGCCATCCCGGCATaGGGGCTTCTCCGAAAATTA +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVSAIPA*GLLRKL
Trigger: TAATTTTCGGAGAAGCCCTCATGCCGGGATGGCAGA...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452671.7
CDS-3UTR GCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGGCTCTTCCAGGTGGTTaGGGATCCACCTATAGGCAT +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQALPGG*GSTYRH
Trigger: ATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGC...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGAAGCACATGGGCATGTaGAGATCGGGCAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRKHMGM*RSGRDE
Trigger: CTCATCTCTGCCCGATCTGCACATGCCCATGTGCTT...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR GCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAAAGCACATGGGCATGTaGAGATCGGGCAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAKHMGM*RSGRDE
Trigger: CTCATCTCTGCCCGATCTGCACATGCCCATGTGCTT...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCAGCTTTTGGGTCTTTATaGTCCTGGGATAAGGAACTT +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSAFGSL*SWDKEL
Trigger: AAGTTCCTTATCCCAGGAGCATAAAGACCCAAAAGC...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTCCTTTCTCATTGGTaGCGCCTGACCACAGAACTA +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLFLSHW*RLTTEL
Trigger: TAGTTCTGTGGTCAGGCGGCACCAATGAGAAAGGAA...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGGGAGAATGGACTTCCTaGAGGTTATTGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRGEWTS*RLLAPG
Trigger: CCCAGGAGCCAATAACCTGCAGGAAGTCCATTCTCC...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436637.5
CDS-3UTR CCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGCACGGCCTTGGAAATaGTACCTCGGAGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSARPWK*YLGASE
Trigger: TTCAGAGGCTCCGAGGTACCATTTCCAAGGCCGTGC...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTTTTGTCTCCAGTGGTaGGTCCTGAGGGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRFCLQW*VLRGAE
Trigger: TTCAGCTCCCCTCAGGACCCACCACTGGAGACAAAA...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCTTTTGTCTCCAGTGGTaGGTCCTGAGGGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPFCLQW*VLRGAE
Trigger: TTCAGCTCCCCTCAGGACCCACCACTGGAGACAAAA...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCCACTGTAGCAATATTTaGACTGGCCCCGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPHCSNI*TGPGHQ
Trigger: TTGGTGGCCGGGGCCAGTCCAAATATTGCTACAGTG...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGCACTGTAGCAATATTTaGACTGGCCCCGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQHCSNI*TGPGHQ
Trigger: TTGGTGGCCGGGGCCAGTCCAAATATTGCTACAGTG...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCACTGTAGCAATATTTaGACTGGCCCCGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRHCSNI*TGPGHQ
Trigger: TTGGTGGCCGGGGCCAGTCCAAATATTGCTACAGTG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGAAGTCCAGGCAGGGGTaGCATAGACACCAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRKSRQG*HRHQGL
Trigger: AAGACCTTGGTGTCTATGCCACCCCTGCCTGGACTT...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CCA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCAAGTCCAGGCAGGGGTaGCATAGACACCAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPKSRQG*HRHQGL
Trigger: AAGACCTTGGTGTCTATGCCACCCCTGCCTGGACTT...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGTGCTGGGGTTACTTCTaGGCCCATTTCTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQCWGYF*AHFWTL
Trigger: GAGAGTCCAGAAATGGGCCCAGAAGTAACCCCAGCA...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTTGCTGGGGTTACTTCTaGGCCCATTTCTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVCWGYF*AHFWTL
Trigger: GAGAGTCCAGAAATGGGCCCAGAAGTAACCCCAGCA...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTGCTGGGGTTACTTCTaGGCCCATTTCTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRCWGYF*AHFWTL
Trigger: GAGAGTCCAGAAATGGGCCCAGAAGTAACCCCAGCA...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTTCATCTCGAGGTGCTaGGGTTACTTCTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRFISRC*GYFWAH
Trigger: ATGGGCCCAGAAGTAACCCCAGCACCTCGAGATGAA...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAATGGCCTTAAGCACATaGGCATGTGCAGATCGGGCA +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAMALST*ACADRA
Trigger: TGCCCGATCTGCACATGCCCATGTGCTTAAGGCCAT...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGATGGCCTTAAGCACATaGGCATGTGCAGATCGGGCA +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRMALST*ACADRA
Trigger: TGCCCGATCTGCACATGCCCATGTGCTTAAGGCCAT...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGGGTAACCTTGAGGACTaGGCAGATTCCATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRGNLED*ADSMAA
Trigger: AGCTGCCATGGAATCTGCCCAGTCCTCAAGGTTACC...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAGGTCAAGTCTTCACCTaGAGCCAGCACTACCTATGG +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAGQVFT*SQHYLW
Trigger: CCATAGGTAGTGCTGGCTCCAGGTGAAGACTTGACC...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCAGTGATTGGTCAGGGTaGACATGTGACCCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPSDWSG*TCDPGL
Trigger: TAGGCCTGGGTCACATGTCCACCCTGACCAATCACT...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGCAAGATGCTGCCACCTaGTGGATACAGAATAGATTT +
Preference number: 4 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQQDAAT*WIQNRF
Trigger: AAATCTATTCTGTATCCACCAGGTGGCAGCATCTTG...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp CAGAAAATTTCTGTACATCTTGAGGGTGTCAGACTGAAAAAGGACCTTAGAAATGTACCTCGGAGCCTCTaGAGAAGGGTGGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: QKISVHLEGVRLKKDLRNVPRSL*RRVVGS
Trigger: GGAACCTACCACCCTTCTTCAGAGGCTCCGAGGTAC...ATTTCTAAGGTCCTTTTTCAGTCTGACACCCTCAAGATGTACAGAAATTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR TCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCAAGCCTTCGAGCTTTaGTGTCAGGGAAGATCTCTC +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRQAFEL*CQGRSL
Trigger: GAGAGATCTTCCCTGACATCAAAGCTCGAAGGCTTG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR TCA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATACAAGCCTTCGAGCTTTaGTGTCAGGGAAGATCTCTC +
Preference number: 4 (lower is better)
Translates to: QDSLTEATLCRGQSRSSIQAFEL*CQGRSL
Trigger: GAGAGATCTTCCCTGACATCAAAGCTCGAAGGCTTG...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATTCTTTGGTTTAGATaGCCGTTCCCGAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSILWFR*PFPRCM
Trigger: CATGCACCTCGGGAACGGTCATCTAAACCAAAGAAT...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAGGCTACAGCTTGTATTaGGGGAAATGCAAGACTGAG +
Preference number: 4 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSGYSLY*GKCKTE
Trigger: CTCAGTCTTGCATTTCCCTCAATACAAGCTGTAGCC...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCACGGCATGAGGGCACTTaGCTTCTCCGAAAATTAGAA +
Preference number: 4 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSRHEGT*LLRKLE
Trigger: TTCTAATTTTCGGAGAAGGCAAGTGCCCTCATGCCG...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290524.8
CDS-3UTR GCA 90 bp CATTGTCAGAAAATTTCTGTACATCTTGAGGGTGTCAGACTGAAAAAGGACCTTATCAGGCTCATCTTCTaGCATCCCGGCATGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HCQKISVHLEGVRLKKDLIRLIF*HPGMRA
Trigger: TGCCCTCATGCCGGGATGGCAGAAGATGAGCCTGAT...AAGGTCCTTTTTCAGTCTGACACCCTCAAGATGTACAGAAATTTTCTGACAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444392.5
CDS-3UTR GCA 90 bp GTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTAATTTCTGTACATCTTaGAGGATCCCCTCTACTTTG +
Preference number: 4 (lower is better)
Translates to: VLFQVVADPPIGIHVLLINFCTS*RIPSTL
Trigger: CAAAGTAGAGGGGATCCTGCAAGATGTACAGAAATT...AATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR GCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGACTAGGGCATTAACCTaGAGGTTATTGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQTRALT*RLLAPG
Trigger: CCCAGGAGCCAATAACCTGCAGGTTAATGCCCTAGT...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAACTAGGGCATTAACCTaGAGGTTATTGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEATRALT*RLLAPG
Trigger: CCCAGGAGCCAATAACCTGCAGGTTAATGCCCTAGT...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCTTGGTCACCACCTATaGCTACCTCTCTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRLGHHL*LPLCSL
Trigger: CAGAGAACAGAGAGGTAGGCATAGGTGGTGACCAAG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCAGGGAATTTTATCTTCTaGTTCTTTGGTATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSGNFIF*FFGMLG
Trigger: TCCCAGCATACCAAAGAAGCAGAAGATAAAATTCCC...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTTATTACCCTGTGGTaGAGTGTCTACCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLFITLW*SVYLSL
Trigger: AAGGGAGAGGTAGACACTGCACCACAGGGTAATAAA...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATACATCTGGAGGGTCTaGATTCCTTTCTCATTGGTG +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLYIWRV*IPFSLV
Trigger: CACCAATGAGAAAGGAATGCAGACCCTCCAGATGTA...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAATCAGGCTCATCTTCTaGCATCCCGGCATGAGGGTT +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSIRLIF*HPGMRV
Trigger: AACCCTCATGCCGGGATGGCAGAAGATGAGCCTGAT...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368870.6
CDS-3UTR GCA 90 bp GAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGAAATCTGGAAAACATTaGATATGCCTGGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: EGVRLKKDLRNYLTRPGTKSGKH*ICLGGQ
Trigger: CTGACCTCCCAGGCATATGCAATGTTTTCCAGATTT...CGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452456.1
CDS-3UTR CCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGTTGTCATGTGGTCCTTaGTCACCACCTATGCCTACC +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQLSCGP*SPPMPT
Trigger: GGTAGGCATAGGTGGTGACCAAGGACCACATGACAA...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTGACACCCTTGTCATGTaGTCCTTGGTCACCACCTAT +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVDTLVM*SLVTTY
Trigger: ATAGGTGGTGACCAAGGACCACATGACAAGGGTGTC...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGGTAACCTTGAGGACTaGGCAGATTCCATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSGNLED*ADSMAA
Trigger: AGCTGCCATGGAATCTGCCCAGTCCTCAAGGTTACC...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGGCCCCTTCCTCCTTTaGAAACAGTACCATCTCCCT +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSGPFLL*KQYHLP
Trigger: AGGGAGATGGTACTGTTTCCAAAGGAGGAAGGGGCC...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAGTCTTTATTACCCTGTaGTGCAGTGTCTACCTCTCC +
Preference number: 4 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSVFITL*CSVYLS
Trigger: GGAGAGGTAGACACTGCACCACAGGGTAATAAAGAC...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCATGGGGGTGTTGCTTTTaGGTCTTTATGCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAWGCCF*VFMLLG
Trigger: TCCCAGGAGCATAAAGACCCAAAAGCAACACCCCCA...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTGGGGGTGTTGCTTTTaGGTCTTTATGCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRWGCCF*VFMLLG
Trigger: TCCCAGGAGCATAAAGACCCAAAAGCAACACCCCCA...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCACACAGACCTGTATCATaGGGGTGTTGCTTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAHRPVS*GCCFWV
Trigger: GACCCAAAAGCAACACCCCCATGATACAGGTCTGTG...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCACAGACCTGTATCATaGGGGTGTTGCTTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRHRPVS*GCCFWV
Trigger: GACCCAAAAGCAACACCCCCATGATACAGGTCTGTG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCAGATGCTGCCACCTGGTaGATACAGAATAGATTTAAT +
Preference number: 4 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSDAATW*IQNRFN
Trigger: ATTAAATCTATTCTGTATCCACCAGGTGGCAGCATC...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCGCATTCCTTTCTCATTaGTGCCGCCTGACCACAGAA +
Preference number: 4 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPAFLSH*CRLTTE
Trigger: TTCTGTGGTCAGGCGGCACCAATGAGAAAGGAATGC...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGAAAAATCAGTGTTTCTTaGGAAGAACCAAGATTCCCT +
Preference number: 4 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRKISVS*EEPRFP
Trigger: AGGGAATCTTGGTTCTTCCCAAGAAACACTGATTTT...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGTCTGCCCCACCTTTCTaGAGTCTCCTAAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQSAPPF*SLLNLE
Trigger: TTCCAGATTTAGGAGACTTCAGAAAGGTGGGGCAGA...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGATTCTTTGGTTTAGATaGCCGTTCCCGAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRILWFR*PFPRCM
Trigger: CATGCACCTCGGGAACGGTCATCTAAACCAAAGAAT...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR TCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAGATGACACTCACTTTTaGGGGGACCAAGGGAATTTT +
Preference number: 4 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSDDTHF*GDQGNF
Trigger: AAAATTCCCTTGGTCCCCTCAAAAGTGAGTGTCATC...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGGGCTACAGCTTGTATTaGGGGAAATGCAAGACTGAG +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQGYSLY*GKCKTE
Trigger: CTCAGTCTTGCATTTCCCTCAATACAAGCTGTAGCC...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATATATATCCTGCTTTGCTaGTTTAGCTGGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: QDSLTEATLCRGQSRSSIYILLC*FSWWSL
Trigger: CAGGCTCCACCAGCTAAAGCAGCAAAGCAGGATATA...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCTCTATATCCTGCTTTaGTGCTTTAGCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRLYILL*CFSWWS
Trigger: GCTCCACCAGCTAAAGCAGCAAAGCAGGATATAGAG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGGTCTACCTCTCCCTTTaGCAAAGGAAAAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRVYLSL*QRKSLL
Trigger: AAGGAGGCTTTTCCTTTGGCAAAGGGAGAGGTAGAC...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTGTCTACCTCTCCCTTTaGCAAAGGAAAAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVVYLSL*QRKSLL
Trigger: AAGGAGGCTTTTCCTTTGGCAAAGGGAGAGGTAGAC...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGGATACGAACATATTCTaGCCTTCTAGGCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: EGVRLKKDLRNYLTRPGTDTNIF*PSRLGK
Trigger: TTTTCCAAGCCTAGAAGGGCAGAATATGTTCGTATC...CGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452456.1
CDS-3UTR CCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGACACCCTTGTCATGTaGTCCTTGGTCACCACCTAT +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSDTLVM*SLVTTY
Trigger: ATAGGTGGTGACCAAGGACCACATGACAAGGGTGTC...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCATGGCCCAGACTTAAATaGTCCTACAGAAGATGCAAC +
Preference number: 4 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSWPRLK*SYRRCN
Trigger: GTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCA...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCATCCCAAGGATACATCTaGAGGGTCTGCATTCCTTTC +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEASQGYI*RVCIPF
Trigger: GAAAGGAATGCAGACCCTCCAGATGTATCCTTGGGA...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGGAAAGCAGGTCTAGCTaGTCTCAACTTAGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRESRSS*SQLSKL
Trigger: TAGCTTGCTAAGTTGAGATCAGCTAGACCTGCTTTC...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR TCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTATTTTCCTTTTTCTaGATGGTTGTAACAGCCGCG +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLLFSFF*MVVTAA
Trigger: CGCGGCTGTTACAACCATTCAGAAAAAGGAAAATAA...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368870.6
CDS-3UTR TCA 90 bp GGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGGTGAATTTCTGTACATCTTaGGGGTGTCAGACTGAAAAA +
Preference number: 4 (lower is better)
Translates to: GVRLKKDLRNYLTRPGTVNFCTS*GCQTEK
Trigger: TTTTTCAGTCTGACACCCTCAAGATGTACAGAAATT...CACCGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR GCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGGTATCATGGGGGTGTTaGTTTTGGGTCTTTATGCTC +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQVSWGC*FWVFML
Trigger: GAGCATAAAGACCCAAAAGCAACACCCCCATGATAC...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAGTATCATGGGGGTGTTaGTTTTGGGTCTTTATGCTC +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAVSWGC*FWVFML
Trigger: GAGCATAAAGACCCAAAAGCAACACCCCCATGATAC...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAACACGTATGACAAGATaGTGCCACCTGGTGGATACA +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSTRMTR*CHLVDT
Trigger: TGTATCCACCAGGTGGCAGCATCTTGTCATACGTGT...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGTCTTTATTACCCTGTaGTGCAGTGTCTACCTCTCC +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSVFITL*CSVYLS
Trigger: GGAGAGGTAGACACTGCACCACAGGGTAATAAAGAC...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGTGGCCCAGACTTAAATaGTCCTACAGAAGATGCAAC +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQWPRLK*SYRRCN
Trigger: GTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCA...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTAGATGCTGCCACCTGGTaGATACAGAATAGATTTAAT +
Preference number: 4 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLDAATW*IQNRFN
Trigger: ATTAAATCTATTCTGTATCCACCAGGTGGCAGCATC...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCATCCCAAGGATACATCTaGAGGGTCTGCATTCCTTTC +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSSQGYI*RVCIPF
Trigger: GAAAGGAATGCAGACCCTCCAGATGTATCCTTGGGA...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCTGTACAGAGGAGAATaGACTTCCTGCAGGTTATTG +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRLYRGE*TSCRLL
Trigger: CAATAACCTGCAGGAAGTCCATTCTCCTCTGTACAG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436637.5
CDS-3UTR TCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGATGACACTCACTTTTaGGGGGACCAAGGGAATTTT +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSDDTHF*GDQGNF
Trigger: AAAATTCCCTTGGTCCCCTCAAAAGTGAGTGTCATC...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR TCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCATGGGATAAGGAACTTTaGAGCACATGCTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAWDKEL*STCSFK
Trigger: CTTAAAGGAGCATGTGCTTCAAAGTTCCTTATCCCA...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAAGGTCTTCCTCCTTATaGCACTGTAGCAATATTTGG +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEARSSSL*HCSNIW
Trigger: CCAAATATTGCTACAGTGGCATAAGGAGGAAGACCT...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGAGGTCTTCCTCCTTATaGCACTGTAGCAATATTTGG +
Preference number: 4 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQRSSSL*HCSNIW
Trigger: CCAAATATTGCTACAGTGGCATAAGGAGGAAGACCT...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGAGGTCTTCCTCCTTATaGCACTGTAGCAATATTTGG +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRRSSSL*HCSNIW
Trigger: CCAAATATTGCTACAGTGGCATAAGGAGGAAGACCT...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR GCA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATAGTATCCTCTATATCCTaGTTTGCTGCTTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QDSLTEATLCRGQSRSSIVSSIS*FAALAG
Trigger: ACCAGCTAAAGCAGCAAAGCAGGATATAGAGGATAC...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR GCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAGTATCCTCTATATCCTaGTTTGCTGCTTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAVSSIS*FAALAG
Trigger: ACCAGCTAAAGCAGCAAAGCAGGATATAGAGGATAC...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCATTTATTACCCTGTGGTaGAGTGTCTACCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSFITLW*SVYLSL
Trigger: AAGGGAGAGGTAGACACTGCACCACAGGGTAATAAA...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGGCTTTTGGGTCTTTATaGTCCTGGGATAAGGAACTT +
Preference number: 4 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRAFGSL*SWDKEL
Trigger: AAGTTCCTTATCCCAGGAGCATAAAGACCCAAAAGC...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAAATTTCTGTACATCTTaGAGGATCCCCTCTACTTTG +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEANFCTS*RIPSTL
Trigger: CAAAGTAGAGGGGATCCTGCAAGATGTACAGAAATT...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTAATTTCTGTACATCTTaGAGGATCCCCTCTACTTTG +
Preference number: 4 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVNFCTS*RIPSTL
Trigger: CAAAGTAGAGGGGATCCTGCAAGATGTACAGAAATT...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR GCA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAGGGAATTTTATCTTCTaGTTCTTTGGTATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAGNFIF*FFGMLG
Trigger: TCCCAGCATACCAAAGAAGCAGAAGATAAAATTCCC...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CCA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATAAAAATCAGTGTTTCTTaGGAAGAACCAAGATTCCCT +
Preference number: 4 (lower is better)
Translates to: QDSLTEATLCRGQSRSSIKISVS*EEPRFP
Trigger: AGGGAATCTTGGTTCTTCCCAAGAAACACTGATTTT...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CCA 90 bp CAGAAAATTTCTGTACATCTTGAGGGTGTCAGACTGAAAAAGGACCTTAGAAATAACATTGCATATGCCTaGGAGGTCAGAAAGGATACG +
Preference number: 4 (lower is better)
Translates to: QKISVHLEGVRLKKDLRNNIAYA*EVRKDT
Trigger: CGTATCCTTTCTGACCTCCCAGGCATATGCAATGTT...ATTTCTAAGGTCCTTTTTCAGTCTGACACCCTCAAGATGTACAGAAATTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452456.1
CDS-3UTR TCA 90 bp CATTGTCAGAAAATTTCTGTACATCTTGAGGGTGTCAGACTGAAAAAGGACCTTAATTTCTGTACATCTTaGGGGTGTCAGACTGAAAAA +
Preference number: 4 (lower is better)
Translates to: HCQKISVHLEGVRLKKDLNFCTS*GCQTEK
Trigger: TTTTTCAGTCTGACACCCTCAAGATGTACAGAAATT...AAGGTCCTTTTTCAGTCTGACACCCTCAAGATGTACAGAAATTTTCTGACAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS GCA 90 bp CCGTTTCAGGATCCGCTCTGCCCAGTCACAGGTCAGGGCACACGCTaGCTCCACCAGTTCATCTCGAGGTGCTGGGGTTACTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PFQDPLCPVTGQGTR*LHQFISRCWGYFWA
Trigger: GGCCCAGAAGTAACCCCAGCACCTCGAGATGAACTGGTGGAGGCAGCGTGTGCCCTGACCTGTGACTGGGCAGAGCGGATCCTGAAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000422595.5
ENST00000436637.5
ENST00000452671.7
ENST00000475144.1
CDS GCA 90 bp TCCTGGGGCCGAGCTCTCAACTACACTCTTCTTCCGCTCTCCACGTaGGAGAGGACCGGCCCCAGTTCGGGCTTCCAGATCCTTAGGAGG +
Preference number: 5 (lower is better)
Translates to: SWGRALNYTLLPLST*ERTGPSSGFQILRR
Trigger: CCTCCTAAGGATCTGGAAGCCCGAACTGGGGCCGGTCCTCTCGCACGTGGAGAGCGGAAGAAGAGTGTAGTTGAGAGCTCGGCCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000436637.5
ENST00000452671.7
CDS GCA 90 bp GCCCGGGGAAGGAGCAGAGGCAGCCGAGCCACTAGGGCATTAACCTaGAGGTTATTGGCTCCTGGGGCCGAGCTCTCAACTACACTCTTC +
Preference number: 5 (lower is better)
Translates to: ARGRSRGSRATRALT*RLLAPGAELSTTLF
Trigger: GAAGAGTGTAGTTGAGAGCTCGGCCCCAGGAGCCAATAACCTGCAGGTTAATGCCCTAGTGGCTCGGCTGCCTCTGCTCCTTCCCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000452671.7
CDS-3UTR CAA 90 bp CCTGGTGTTAGCGGCCACCCAAGCAACTCCCTGCTCCTAGTTTCCACTTGGGGAGCCCTTCCCCCAGTCTaGGGGCTCTTAGCATCAGGC +
Preference number: 5 (lower is better)
Translates to: PGVSGHPSNSLLLVSTWGALPPV*GLLASG
Trigger: GCCTGATGCTAAGAGCCCCAAGACTGGGGGAAGGGC...TCCCCAAGTGGAAACTAGGAGCAGGGAGTTGCTTGGGTGGCCGCTAACACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp CTCAGTGTACTTGGCTCTGAGCTTTTGTCTCCAGTGGTGGGTCCTGAGGGGAGCGCCCTTCCCCCAGTCTaGGGGCTCTTAGCATCAGGC +
Preference number: 5 (lower is better)
Translates to: LSVLGSELLSPVVGPEGSALPPV*GLLASG
Trigger: GCCTGATGCTAAGAGCCCCAAGACTGGGGGAAGGGC...GCTCCCCTCAGGACCCACCACTGGAGACAAAAGCTCAGAGCCAAGTACACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS CCA 90 bp CCCAGGTCCTCCACCCCCAACCTCTCTAGTCAAGGATACTTGGACTaGCCCCGGCCACCAAGCCTTCGAGCTTTGATGTCAGGGAAGATC +
Preference number: 5 (lower is better)
Translates to: PRSSTPNLSSQGYLD*PRPPSLRALMSGKI
Trigger: GATCTTCCCTGACATCAAAGCTCGAAGGCTTGGTGGCCGGGGCCAGTCCAAGTATCCTTGACTAGAGAGGTTGGGGGTGGAGGACCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469513.5
CDS CCA 90 bp GGTGCATGTTCGTCCTCTTCAGCGAGCCCCATGGCCTTAAGCACATaGGCATGTGCAGATCGGGCAGAGATGAGATGCTGCTGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: GACSSSSASPMALST*ACADRAEMRCCCSR
Trigger: CCTGCTACAGCAGCATCTCATCTCTGCCCGATCTGCACATGCCCATGTGCTTAAGGCCATGGGGCTCGCTGAAGAGGACGAACATGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CAA 90 bp CCTGGTGTTAGCGGCCACCCAAGCAACTCCCTGCTCCTAGTTTCCACTTGGGGACTTGGCTCTGAGCTTTaGTCTCCAGTGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: PGVSGHPSNSLLLVSTWGLGSEL*SPVVGP
Trigger: AGGACCCACCACTGGAGACAAAAGCTCAGAGCCAAG...TCCCCAAGTGGAAACTAGGAGCAGGGAGTTGCTTGGGTGGCCGCTAACACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS GCA 90 bp GCCTTAAGCACATGGGCATGTGCAGATCGGGCAGAGATGAGATGCTaGTGTAGCAGGAAGCGGGCGACCTCAACGATGGAACTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: ALSTWACADRAEMRC*CSRKRATSTMELKD
Trigger: GTCCTTCAGTTCCATCGTTGAGGTCGCCCGCTTCCTGCTACAGCAGCATCTCATCTCTGCCCGATCTGCACATGCCCATGTGCTTAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000436637.5
ENST00000452671.7
CDS GCA 90 bp ATGGCCTTAAGCACATGGGCATGTGCAGATCGGGCAGAGATGAGATaGTGCTGTAGCAGGAAGCGGGCGACCTCAACGATGGAACTGAAG +
Preference number: 5 (lower is better)
Translates to: MALSTWACADRAEMR*CCSRKRATSTMELK
Trigger: CTTCAGTTCCATCGTTGAGGTCGCCCGCTTCCTGCTACAGCAGCATCTCATCTCTGCCCGATCTGCACATGCCCATGTGCTTAAGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000436637.5
ENST00000452671.7
CDS GCA 90 bp CGCCCCCGTTTCCTTTTGGCATCACTTGCTGTATCCTCTATATCCTaGTTTGCTGCTTTAGCTGGTGGAGCCTGCCCACTGGCCTCACTC +
Preference number: 5 (lower is better)
Translates to: RPRFLLASLAVSSIS*FAALAGGACPLASL
Trigger: GAGTGAGGCCAGTGGGCAGGCTCCACCAGCTAAAGCAGCAAAGCAGGATATAGAGGATACAGCAAGTGATGCCAAAAGGAAACGGGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000452671.7
CDS-3UTR CAA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCAGCCCTTCCCCCAGTCTaGGGGCTCTTAGCATCAGGC +
Preference number: 5 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSALPPV*GLLASG
Trigger: GCCTGATGCTAAGAGCCCCAAGACTGGGGGAAGGGC...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp GTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTGCCCTTCCCCCAGTCTaGGGGCTCTTAGCATCAGGC +
Preference number: 5 (lower is better)
Translates to: VLFQVVADPPIGIHVLLIALPPV*GLLASG
Trigger: GCCTGATGCTAAGAGCCCCAAGACTGGGGGAAGGGC...AATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CAA 90 bp CCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACCTTGGCTCTGAGCTTTaGTCTCCAGTGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: PAVLSPDTYDKMLPPGGYLGSEL*SPVVGP
Trigger: AGGACCCACCACTGGAGACAAAAGCTCAGAGCCAAG...GTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp TTGGCAGACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCTTGGCTCTGAGCTTTaGTCTCCAGTGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: LADRCQCALPGGCGSTYRLGSEL*SPVVGP
Trigger: AGGACCCACCACTGGAGACAAAAGCTCAGAGCCAAG...CCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTCTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CAA 90 bp CCTGGTGTTAGCGGCCACCCAAGCAACTCCCTGCTCCTAGTTTCCACTTGGGGACCAAGCCTTCGAGCTTaGATGTCAGGGAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: PGVSGHPSNSLLLVSTWGPSLRA*MSGKIS
Trigger: AGAGATCTTCCCTGACATCAAAGCTCGAAGGCTTGG...TCCCCAAGTGGAAACTAGGAGCAGGGAGTTGCTTGGGTGGCCGCTAACACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS CCA 90 bp CAGGCAAGACTCTCACAGTACTTCCTGAGTGAGAGGGGAGCAGAGTaGGAAGATACTCAGAGAAGGAGGCCATGGGTAGGCTCGAAGAGT +
Preference number: 5 (lower is better)
Translates to: QARLSQYFLSERGAE*EDTQRRRPWVGSKS
Trigger: ACTCTTCGAGCCTACCCATGGCCTCCTTCTCTGAGTATCTTCCCACTCTGCTCCCCTCTCACTCAGGAAGTACTGTGAGAGTCTTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475144.1
CDS-3UTR CAA 90 bp GGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGGTGGCCCTTCCCCCAGTCTaGGGGCTCTTAGCATCAGGC +
Preference number: 5 (lower is better)
Translates to: GVRLKKDLRNYLTRPGTVALPPV*GLLASG
Trigger: GCCTGATGCTAAGAGCCCCAAGACTGGGGGAAGGGC...CACCGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR CAA 90 bp GAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGGCCCTTCCCCCAGTCTaGGGGCTCTTAGCATCAGGC +
Preference number: 5 (lower is better)
Translates to: EGVRLKKDLRNYLTRPGTALPPV*GLLASG
Trigger: GCCTGATGCTAAGAGCCCCAAGACTGGGGGAAGGGC...CGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR CAA 90 bp CAGACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACTTGGCTCTGAGCTTTaGTCTCCAGTGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: QTGVSVLFQVVADPPIGILGSEL*SPVVGP
Trigger: AGGACCCACCACTGGAGACAAAAGCTCAGAGCCAAG...TATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CAA 90 bp CCTGGTGTTAGCGGCCACCCAAGCAACTCCCTGCTCCTAGTTTCCACTTGGGGAATCTCTCTGATGATCTaGCCAAAGTTGGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: PGVSGHPSNSLLLVSTWGISLMI*PKLAVL
Trigger: CAGCACAGCCAACTTTGGCAAGATCATCAGAGAGAT...TCCCCAAGTGGAAACTAGGAGCAGGGAGTTGCTTGGGTGGCCGCTAACACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGAGTCTCTCTGGCTTCTaGTGGGCTCCACCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQSLSGF*WAPPSG
Trigger: CCCAGAGGGTGGAGCCCACAAGAAGCCAGAGAGACT...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp CCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACTCTCCCATGGTAACCTaGAGGACTGGGCAGATTCCA +
Preference number: 5 (lower is better)
Translates to: PAVLSPDTYDKMLPPGGYSPMVT*RTGQIP
Trigger: TGGAATCTGCCCAGTCCTCAAGGTTACCATGGGAGA...GTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS CCA 90 bp CTCACTCACAGGTACTTCAGCTGTCCTCTTGACACCCTTGTCATGTaGTCCTTGGTCACCACCTATGCCTACCTCTCTGTTCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: LTHRYFSCPLDTLVM*SLVTTYAYLSVLCA
Trigger: GGCACAGAGAACAGAGAGGTAGGCATAGGTGGTGACCAAGGACCACATGACAAGGGTGTCAAGAGGACAGCTGAAGTACCTGTGAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000452671.7
CDS-3UTR CAA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGAGTCTCTCTGGCTTCTaGTGGGCTCCACCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSESLSGF*WAPPSG
Trigger: CCCAGAGGGTGGAGCCCACAAGAAGCCAGAGAGACT...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp AACCCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATTATCTTCTGCTTCTTaGGTATGCTGGGAACCGGGG +
Preference number: 5 (lower is better)
Translates to: NPAVLSPDTYDKMLPPGGLSSAS*VCWEPG
Trigger: CCCCGGTTCCCAGCATACCAAAGAAGCAGAAGATAA...TCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp CCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACTGTCTACCTCTCCCTTaGCCAAAGGAAAAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PAVLSPDTYDKMLPPGGYCLPLP*PKEKPP
Trigger: AGGAGGCTTTTCCTTTGGCAAAGGGAGAGGTAGACA...GTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS CCA 90 bp AGGGAAGATCTCTCTGATGATCTTGCCAAAGTTGGCTGTGCTGAGTaGGCGGCAACAGGCAAGACTCTCACAGTACTTCCGATAGGCATC +
Preference number: 5 (lower is better)
Translates to: REDLSDDLAKVGCAE*AATGKTLTVLPIGI
Trigger: GATGCCTATCGGAAGTACTGTGAGAGTCTTGCCTGTTGCCGCCCACTCAGCACAGCCAACTTTGGCAAGATCATCAGAGAGATCTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000422595.5
ENST00000436637.5
ENST00000450506.5
ENST00000452671.7
ENST00000458484.5
ENST00000469513.5
CDS-3UTR CAA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAGCCCTTCCCCCAGTCTaGGGGCTCTTAGCATCAGGC +
Preference number: 5 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSALPPV*GLLASG
Trigger: GCCTGATGCTAAGAGCCCCAAGACTGGGGGAAGGGC...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp CCTGGTGTTAGCGGCCACCCAAGCAACTCCCTGCTCCTAGTTTCCACTTGGGGAGTCACTACAGATTTATaGGTTACACTAAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PGVSGHPSNSLLLVSTWGVTTDL*VTLKPR
Trigger: CCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGAC...TCCCCAAGTGGAAACTAGGAGCAGGGAGTTGCTTGGGTGGCCGCTAACACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGATGCATTCCTTTCTCATaGGTGCCGCCTGACCACAGA +
Preference number: 5 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRCIPFS*VPPDHR
Trigger: TCTGTGGTCAGGCGGCACCAATGAGAAAGGAATGCA...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp TTCCAGGTGGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTGCTCAGAGGATCCCCTCTACTTaGTTCTGCACGGCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: FQVVADPPIGIHVLLIAQRIPST*FCTALL
Trigger: GAGCAAGGCCGTGCAGAACAAAGTAGAGGGGATCCT...CTGAGCAATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435314.5
CDS GCA 90 bp TTTCCTTTTGGCATCACTTGCTGTATCCTCTATATCCTGCTTTGCTaGTTTAGCTGGTGGAGCCTGCCCACTGGCCTCACTCACAGGTAC +
Preference number: 5 (lower is better)
Translates to: FPFGITCCILYILLC*FSWWSLPTGLTHRY
Trigger: GTACCTGTGAGTGAGGCCAGTGGGCAGGCTCCACCAGCTAAAGCAGCAAAGCAGGATATAGAGGATACAGCAAGTGATGCCAAAAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000452671.7
CDS-3UTR CAA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGTCTCCCATGGTAACCTaGAGGACTGGGCAGATTCCA +
Preference number: 5 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQSPMVT*RTGQIP
Trigger: TGGAATCTGCCCAGTCCTCAAGGTTACCATGGGAGA...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AACCCCGCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATGTATCATGGGGGTGTaGCTTTTGGGTCTTTATGCT +
Preference number: 5 (lower is better)
Translates to: NPAVLSPDTYDKMLPPGGCIMGV*LLGLYA
Trigger: AGCATAAAGACCCAAAAGCAACACCCCCATGATACA...TCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGCGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTGGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTGCTCAGTGTACAGGATCCCCTCTACTTaGTTCTGCACGGCGAAATGG +
Preference number: 5 (lower is better)
Translates to: GGCGSTYRHTCTPHCSVYRIPST*FCTAKW
Trigger: CCATTTCGCCGTGCAGAACAAAGTAGAGGGGATCCT...GTACACTGAGCAATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421986.5
CDS-3UTR CAA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGCCAAGCCTTCGAGCTTaGATGTCAGGGAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQPSLRA*MSGKIS
Trigger: AGAGATCTTCCCTGACATCAAAGCTCGAAGGCTTGG...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGAGTCTCTCTGGCTTCTaGTGGGCTCCACCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRSLSGF*WAPPSG
Trigger: CCCAGAGGGTGGAGCCCACAAGAAGCCAGAGAGACT...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CAA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATAAGTCTCTCTGGCTTCTaGTGGGCTCCACCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: QDSLTEATLCRGQSRSSISLSGF*WAPPSG
Trigger: CCCAGAGGGTGGAGCCCACAAGAAGCCAGAGAGACT...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGACTTCAGCTGTCCTCTaGACACCCTTGTCATGTGGT +
Preference number: 5 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQTSAVL*TPLSCG
Trigger: ACCACATGACAAGGGTGTCAAGAGGACAGCTGAAGT...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTACGCCCCCGTTTCCTTTaGGCATCACTTGCTGTATCC +
Preference number: 5 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLRPRFL*ASLAVS
Trigger: GGATACAGCAAGTGATGCCAAAAGGAAACGGGGGCG...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGTTATCTTCTGCTTCTTaGGTATGCTGGGAACCGGGG +
Preference number: 5 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQLSSAS*VCWEPG
Trigger: CCCCGGTTCCCAGCATACCAAAGAAGCAGAAGATAA...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGACTTCCTGCAGGTTATaGGCTCCTGGGGCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRTSCRL*APGAEL
Trigger: GAGCTCGGCCCCAGGAGCCAATAACCTGCAGGAAGT...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436637.5
CDS-3UTR CAA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGATACATGTACTCCTCATaGCTCAGTGTACTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRYMYSS*LSVLGS
Trigger: AGAGCCAAGTACACTGAGCAATGAGGAGTACATGTA...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp ACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACATTACATGTACTCCTCATaGCTCAGTGTACTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: TGVSVLFQVVADPPIGIHYMYSS*LSVLGS
Trigger: AGAGCCAAGTACACTGAGCAATGAGGAGTACATGTA...ATGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CAA 90 bp ACAGGTGTCAGTGTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACATCATAAACACTTTGCTTaGGCAGACAGGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: TGVSVLFQVVADPPIGIHHKHFA*ADRCQC
Trigger: ACACTGACACCTGTCTGCCAAAGCAAAGTGTTTATG...ATGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACTGACACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CAA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGGGCATCATAAACACTTaGCTTTGGCAGACAGGTGTC +
Preference number: 5 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQGIINT*LWQTGV
Trigger: GACACCTGTCTGCCAAAGCAAAGTGTTTATGATGCC...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp TGGTGGGTCCTGAGGGGAGCTGAAGGTAGAGATACAGCTTGTCATTGTCAGAAAGGCATCATAAACACTTaGCTTTGGCAGACAGGTGTC +
Preference number: 5 (lower is better)
Translates to: WWVLRGAEGRDTACHCQKGIINT*LWQTGV
Trigger: GACACCTGTCTGCCAAAGCAAAGTGTTTATGATGCC...TTTCTGACAATGACAAGCTGTATCTCTACCTTCAGCTCCCCTCAGGACCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CAA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATGATCTTGCCAAAGTaGGCTGTGCTGAGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSMILPK*AVLSGR
Trigger: CCGCCCACTCAGCACAGCCAACTTTGGCAAGATCAT...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATCTCTCTGATGATCTaGCCAAAGTTGGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQISLMI*PKLAVL
Trigger: CAGCACAGCCAACTTTGGCAAGATCATCAGAGAGAT...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCATTAACCTGCAGGTTATaGGCTCCTGGGGCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEALTCRL*APGAEL
Trigger: GAGCTCGGCCCCAGGAGCCAATAACCTGCAGGTTAA...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCTTAACCTGCAGGTTATaGGCTCCTGGGGCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPLTCRL*APGAEL
Trigger: GAGCTCGGCCCCAGGAGCCAATAACCTGCAGGTTAA...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTACTTGTCATGTGGTCCTaGGTCACCACCTATGCCTAC +
Preference number: 5 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLLVMWS*VTTYAY
Trigger: GTAGGCATAGGTGGTGACCAAGGACCACATGACAAG...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGTTATCTTCTGCTTCTTaGGTATGCTGGGAACCGGGG +
Preference number: 5 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSELSSAS*VCWEPG
Trigger: CCCCGGTTCCCAGCATACCAAAGAAGCAGAAGATAA...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGTGGCTTCTGCTGCCCTaGATGACACTCACTTTTGAG +
Preference number: 5 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSEWLLLP*MTLTFE
Trigger: CTCAAAAGTGAGTGTCATCAAGGGCAGCAGAAGCCA...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGAGGAAAAGCCTCCTTTaGGCTTCTGCTGCCCTTGAT +
Preference number: 5 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSERKSLL*ASAALD
Trigger: ATCAAGGGCAGCAGAAGCCAAAAGGAGGCTTTTCCT...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTGGAATCCATGTGATTTaGGGGAGGCTGACCCCCACC +
Preference number: 5 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVGIHVI*GRLTPT
Trigger: GGTGGGGGTCAGCCTCCCCAAAATCACATGGATTCC...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp GCAGTCCTAAGTCCTGACACGTATGACAAGATGCTGCCACCTGGTGGATACAGAGCTCCTAGTTTCCACTaGGGGAATCCATGTGATTTT +
Preference number: 5 (lower is better)
Translates to: AVLSPDTYDKMLPPGGYRAPSFH*GNPCDF
Trigger: AAAATCACATGGATTCCCCAAGTGGAAACTAGGAGC...TCTGTATCCACCAGGTGGCAGCATCTTGTCATACGTGTCAGGACTTAGGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTGTCAGACTGAAAAAGGACCTTAGAAATTATTTGACAAGGCCGGGCACGGTGGACCTTAGAAATTATTaGACAAGGCCGGGCACGGTG +
Preference number: 5 (lower is better)
Translates to: GVRLKKDLRNYLTRPGTVDLRNY*TRPGTV
Trigger: CACCGTGCCCGGCCTTGTCAAATAATTTCTAAGGTC...CACCGTGCCCGGCCTTGTCAAATAATTTCTAAGGTCCTTTTTCAGTCTGACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR CAA 90 bp GCGGATCCACCTATAGGCATACATGTACTCCTCATTGCTCAGTGTACTTGGCTCTGCCCAAAGAGATCTTaGCCATCTCCATTCTATCTG +
Preference number: 5 (lower is better)
Translates to: ADPPIGIHVLLIAQCTWLCPKRS*PSPFYL
Trigger: CAGATAGAATGGAGATGGCAAAGATCTCTTTGGGCA...GAGCCAAGTACACTGAGCAATGAGGAGTACATGTATGCCTATAGGTGGATCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CAA 90 bp GTGCTCTTCCAGGTGGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTTGCCCAAAGAGATCTTaGCCATCTCCATTCTATCTG +
Preference number: 5 (lower is better)
Translates to: VLFQVVADPPIGIHVLLICPKRS*PSPFYL
Trigger: CAGATAGAATGGAGATGGCAAAGATCTCTTTGGGCA...AATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CAA 90 bp CAGGTGGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTGCTCAGTGTCATAAACACTTTGCTTaGGCAGACAGGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: QVVADPPIGIHVLLIAQCHKHFA*ADRCQC
Trigger: ACACTGACACCTGTCTGCCAAAGCAAAGTGTTTATG...ACACTGAGCAATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CAA 90 bp CAAGCTGAAAAGGTCAGAGGCAGCAACCAGGTACTAAGTAGACTGGGTGACTCACATAAACACTTTGCTTaGGCAGACAGGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: QAEKVRGSNQVLSRLGDSHKHFA*ADRCQC
Trigger: ACACTGACACCTGTCTGCCAAAGCAAAGTGTTTATG...TGAGTCACCCAGTCTACTTAGTACCTGGTTGCTGCCTCTGACCTTTTCAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp GCAGCCATTAAGTGGCCCAGACTTAAATGGTCCTACAGAAGATGCAACAGTGAGGGCATCATAAACACTTaGCTTTGGCAGACAGGTGTC +
Preference number: 5 (lower is better)
Translates to: AAIKWPRLKWSYRRCNSEGIINT*LWQTGV
Trigger: GACACCTGTCTGCCAAAGCAAAGTGTTTATGATGCC...CTCACTGTTGCATCTTCTGTAGGACCATTTAAGTCTGGGCCACTTAATGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTGCTCAGTGTACTTGGGCATCATAAACACTTaGCTTTGGCAGACAGGTGTC +
Preference number: 5 (lower is better)
Translates to: GCGSTYRHTCTPHCSVYLGIINT*LWQTGV
Trigger: GACACCTGTCTGCCAAAGCAAAGTGTTTATGATGCC...CAAGTACACTGAGCAATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CAA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGATGATCTTGCCAAAGTaGGCTGTGCTGAGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRMILPK*AVLSGR
Trigger: CCGCCCACTCAGCACAGCCAACTTTGGCAAGATCAT...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CAA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTACCAAGCCTTCGAGCTTaGATGTCAGGGAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLPSLRA*MSGKIS
Trigger: AGAGATCTTCCCTGACATCAAAGCTCGAAGGCTTGG...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAGTGGAGAGACTGGGATaGGCGGAATTAGTGAGCGAG +
Preference number: 5 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAVERLG*AELVSE
Trigger: CTCGCTCACTAATTCCGCCAATCCCAGTCTCTCCAC...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTGTGGAGAGACTGGGATaGGCGGAATTAGTGAGCGAG +
Preference number: 5 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVVERLG*AELVSE
Trigger: CTCGCTCACTAATTCCGCCAATCCCAGTCTCTCCAC...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCGTGGAGAGACTGGGATaGGCGGAATTAGTGAGCGAG +
Preference number: 5 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPVERLG*AELVSE
Trigger: CTCGCTCACTAATTCCGCCAATCCCAGTCTCTCCAC...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCACGCCCCCGTTTCCTTTaGGCATCACTTGCTGTATCC +
Preference number: 5 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEARPRFL*ASLAVS
Trigger: GGATACAGCAAGTGATGCCAAAAGGAAACGGGGGCG...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCGCCCCCGTTTCCTTTaGGCATCACTTGCTGTATCC +
Preference number: 5 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRRPRFL*ASLAVS
Trigger: GGATACAGCAAGTGATGCCAAAAGGAAACGGGGGCG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGGAATCCATGTGATTTaGGGGAGGCTGACCCCCACC +
Preference number: 5 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSGIHVI*GRLTPT
Trigger: GGTGGGGGTCAGCCTCCCCAAAATCACATGGATTCC...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS TCA 90 bp GGGGGTGTTGCTTTTGGGTCTTTATGCTCCTGGGATAAGGAACTTTaGAGCACATGCTCCTTTAAGTCTTTATTACCCTGTGGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: GGVAFGSLCSWDKEL*STCSFKSLLPCGAV
Trigger: CACTGCACCACAGGGTAATAAAGACTTAAAGGAGCATGTGCTTCAAAGTTCCTTATCCCAGGAGCATAAAGACCCAAAAGCAACACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS TCA 90 bp CCCAAAGAGATCTTTGCCATCTCCATTCTATCTGCCCCACCTTTCTaGAGTCTCCTAAATCTGGAAAACTCTGAACAGTCGCCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: PKEIFAISILSAPPF*SLLNLENSEQSPSN
Trigger: GTTGGAAGGCGACTGTTCAGAGTTTTCCAGATTTAGGAGACTTCAGAAAGGTGGGGCAGATAGAATGGAGATGGCAAAGATCTCTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412774.5
ENST00000421986.5
ENST00000430227.5
CDS GCA 90 bp AGGCCCATATATGCCCAAAGAGATCTTTGCCATCTCCATTCTATCTaGCCCACCTTTCTGAAGTCTCCTAAATCTGGAAAACTCGTAGCC +
Preference number: 5 (lower is better)
Translates to: RPIYAQRDLCHLHSI*PTFLKSPKSGKLVA
Trigger: GGCTACGAGTTTTCCAGATTTAGGAGACTTCAGAAAGGTGGGGCAGATAGAATGGAGATGGCAAAGATCTCTTTGGGCATATATGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000437327.5
ENST00000444392.5
ENST00000452671.7
ENST00000494217.5
CDS GCA 90 bp AGGCCCATATATGCCCAAAGAGATCTTTGCCATCTCCATTCTATCTaGCCCACCTTTCTGAAGTCTCCTAAATCTGGAAAACTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: RPIYAQRDLCHLHSI*PTFLKSPKSGKLLP
Trigger: GGGAAGGAGTTTTCCAGATTTAGGAGACTTCAGAAAGGTGGGGCAGATAGAATGGAGATGGCAAAGATCTCTTTGGGCATATATGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422595.5
CDS-3UTR CAA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGAGGATCCCCTCTACTTaGTTCTGCACGGCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQRIPST*FCTALE
Trigger: TTCCAAGGCCGTGCAGAACAAAGTAGAGGGGATCCT...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTAGGATCCCCTCTACTTaGTTCTGCACGGCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVRIPST*FCTALE
Trigger: TTCCAAGGCCGTGCAGAACAAAGTAGAGGGGATCCT...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGAGGATCCCCTCTACTTaGTTCTGCACGGCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRRIPST*FCTALE
Trigger: TTCCAAGGCCGTGCAGAACAAAGTAGAGGGGATCCT...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCACTTGGCTCTGAGCTTTaGTCTCCAGTGGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSLGSEL*SPVVGP
Trigger: AGGACCCACCACTGGAGACAAAAGCTCAGAGCCAAG...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTTGCGGATCCACCTATAGGCATACATGTACTCCTCATTGCTCAGTGTACTTGTACATGTACTCCTCATaGCTCAGTGTACTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: GCGSTYRHTCTPHCSVYLYMYSS*LSVLGS
Trigger: AGAGCCAAGTACACTGAGCAATGAGGAGTACATGTA...CAAGTACACTGAGCAATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000435314.5
CDS-3UTR CAA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAATGATCTTGCCAAAGTaGGCTGTGCTGAGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSMILPK*AVLSGR
Trigger: CCGCCCACTCAGCACAGCCAACTTTGGCAAGATCAT...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCACTTGTCATGTGGTCCTaGGTCACCACCTATGCCTAC +
Preference number: 5 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEALVMWS*VTTYAY
Trigger: GTAGGCATAGGTGGTGACCAAGGACCACATGACAAG...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp CCATTCCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGTCCTTTTGGCATCACTaGCTGTATCCTCTATATCCT +
Preference number: 5 (lower is better)
Translates to: PFLPSHRIAQGIQVRSLQSFWHH*LYPLYP
Trigger: AGGATATAGAGGATACAGCAAGTGATGCCAAAAGGA...CTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCATCTCCCATGGTAACCTaGAGGACTGGGCAGATTCCA +
Preference number: 5 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEASPMVT*RTGQIP
Trigger: TGGAATCTGCCCAGTCCTCAAGGTTACCATGGGAGA...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGATGGGGGTGTTGCTTTaGGGTCTTTATGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRMGVLL*GLYAPG
Trigger: CCCAGGAGCATAAAGACCCAAAAGCAACACCCCCAT...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCATGGGGGTGTTGCTTTaGGGTCTTTATGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPMGVLL*GLYAPG
Trigger: CCCAGGAGCATAAAGACCCAAAAGCAACACCCCCAT...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTGCATTCCTTTCTCATaGGTGCCGCCTGACCACAGA +
Preference number: 5 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRCIPFS*VPPDHR
Trigger: TCTGTGGTCAGGCGGCACCAATGAGAAAGGAATGCA...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGCCAAGCCTTCGAGCTTaGATGTCAGGGAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRPSLRA*MSGKIS
Trigger: AGAGATCTTCCCTGACATCAAAGCTCGAAGGCTTGG...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CAA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCACTTGTCATGTGGTCCTaGGTCACCACCTATGCCTAC +
Preference number: 5 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSLVMWS*VTTYAY
Trigger: GTAGGCATAGGTGGTGACCAAGGACCACATGACAAG...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCACTTCAGCTGTCCTCTaGACACCCTTGTCATGTGGT +
Preference number: 5 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPTSAVL*TPLSCG
Trigger: ACCACATGACAAGGGTGTCAAGAGGACAGCTGAAGT...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAACTTCAGCTGTCCTCTaGACACCCTTGTCATGTGGT +
Preference number: 5 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEATSAVL*TPLSCG
Trigger: ACCACATGACAAGGGTGTCAAGAGGACAGCTGAAGT...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCAATGGCAGCTGCTGACTaGAGAGGGGTAGAATTCCTT +
Preference number: 5 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAMAAAD*RGVEFL
Trigger: AAGGAATTCTACCCCTCTCAAGTCAGCAGCTGCCAT...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGATGGCAGCTGCTGACTaGAGAGGGGTAGAATTCCTT +
Preference number: 5 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRMAAAD*RGVEFL
Trigger: AAGGAATTCTACCCCTCTCAAGTCAGCAGCTGCCAT...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCATGGCTTCTGCTGCCCTaGATGACACTCACTTTTGAG +
Preference number: 5 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAWLLLP*MTLTFE
Trigger: CTCAAAAGTGAGTGTCATCAAGGGCAGCAGAAGCCA...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCTGGCTTCTGCTGCCCTaGATGACACTCACTTTTGAG +
Preference number: 5 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPWLLLP*MTLTFE
Trigger: CTCAAAAGTGAGTGTCATCAAGGGCAGCAGAAGCCA...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATAAGGAAAAGCCTCCTTTaGGCTTCTGCTGCCCTTGAT +
Preference number: 5 (lower is better)
Translates to: QDSLTEATLCRGQSRSSIRKSLL*ASAALD
Trigger: ATCAAGGGCAGCAGAAGCCAAAAGGAGGCTTTTCCT...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGAAAAGCCTCCTTTaGGCTTCTGCTGCCCTTGAT +
Preference number: 5 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPRKSLL*ASAALD
Trigger: ATCAAGGGCAGCAGAAGCCAAAAGGAGGCTTTTCCT...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCATGTCTACCTCTCCCTTaGCCAAAGGAAAAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEACLPLP*PKEKPP
Trigger: AGGAGGCTTTTCCTTTGGCAAAGGGAGAGGTAGACA...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAATGGGGGTGTTGCTTTaGGGTCTTTATGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSMGVLL*GLYAPG
Trigger: CCCAGGAGCATAAAGACCCAAAAGCAACACCCCCAT...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCGGCATCATAAACACTTaGCTTTGGCAGACAGGTGTC +
Preference number: 5 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPGIINT*LWQTGV
Trigger: GACACCTGTCTGCCAAAGCAAAGTGTTTATGATGCC...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGATCTCTCTGATGATCTaGCCAAAGTTGGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQISLMI*PKLAVL
Trigger: CAGCACAGCCAACTTTGGCAAGATCATCAGAGAGAT...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGATCTCTCTGATGATCTaGCCAAAGTTGGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRISLMI*PKLAVL
Trigger: CAGCACAGCCAACTTTGGCAAGATCATCAGAGAGAT...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CAA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAATGGCAGCTGCTGACTaGAGAGGGGTAGAATTCCTT +
Preference number: 5 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSMAAAD*RGVEFL
Trigger: AAGGAATTCTACCCCTCTCAAGTCAGCAGCTGCCAT...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCATGTCTACCTCTCCCTTaGCCAAAGGAAAAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSCLPLP*PKEKPP
Trigger: AGGAGGCTTTTCCTTTGGCAAAGGGAGAGGTAGACA...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp CCTACCTTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTAGTCACTACAGATTTATaGGTTACACTAAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PTFPQDSTGNTGKVTTDLVTTDL*VTLKPR
Trigger: CCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGAC...TAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAAGGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS GCA 90 bp CTCCGAAAATTAGAAATTATTCCATTACTTCGCCAGGCCCATATATaGCCAAAGAGATCTTTGCCATCTCCATTCTATCTGCCCCACCTT +
Preference number: 5 (lower is better)
Translates to: LRKLEIIPLLRQAHI*PKRSLPSPFYLPHL
Trigger: AAGGTGGGGCAGATAGAATGGAGATGGCAAAGATCTCTTTGGGCATATATGGGCCTGGCGAAGTAATGGAATAATTTCTAATTTTCGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000412774.5
ENST00000421986.5
ENST00000422595.5
ENST00000430227.5
ENST00000435314.5
ENST00000436271.5
ENST00000437327.5
ENST00000444392.5
ENST00000450506.5
ENST00000452456.1
ENST00000452671.7
ENST00000478564.5
ENST00000479681.5
ENST00000494217.5
CDS GCA 90 bp AGGCCCATATATGCCCAAAGAGATCTTTGCCATCTCCATTCTATCTaGCCCACCTTTCTGAAGTCTCCTAAATCTGGAAAACATTGCATA +
Preference number: 5 (lower is better)
Translates to: RPIYAQRDLCHLHSI*PTFLKSPKSGKHCI
Trigger: TATGCAATGTTTTCCAGATTTAGGAGACTTCAGAAAGGTGGGGCAGATAGAATGGAGATGGCAAAGATCTCTTTGGGCATATATGGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392746.7
ENST00000435314.5
ENST00000436271.5
ENST00000450506.5
ENST00000452456.1
ENST00000478564.5
ENST00000479681.5
CDS-3UTR CAA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATATGCCCAAAGAGATCTTaGCCATCTCCATTCTATCTG +
Preference number: 5 (lower is better)
Translates to: QDSLTEATLCRGQSRSSICPKRS*PSPFYL
Trigger: CAGATAGAATGGAGATGGCAAAGATCTCTTTGGGCA...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp ACCTATATATTCATCATACTTAGCCCATTCCTACCTTCCCACAGGATAGCACAGTGCCCAAAGAGATCTTaGCCATCTCCATTCTATCTG +
Preference number: 5 (lower is better)
Translates to: TYIFIILSPFLPSHRIAQCPKRS*PSPFYL
Trigger: CAGATAGAATGGAGATGGCAAAGATCTCTTTGGGCA...CTGTGCTATCCTGTGGGAAGGTAGGAATGGGCTAAGTATGATGAATATATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp CAGAAAATTTCTGTACATCTTGAGGGTGTCAGACTGAAAAAGGACCTTAGAAATAGGATCCCCTCTACTTaGTTCTGCACGGCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: QKISVHLEGVRLKKDLRNRIPST*FCTALE
Trigger: TTCCAAGGCCGTGCAGAACAAAGTAGAGGGGATCCT...ATTTCTAAGGTCCTTTTTCAGTCTGACACCCTCAAGATGTACAGAAATTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR CAA 90 bp AGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCAGAGGCATACATGTACTCCTCATaGCTCAGTGTACTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: RFIGYTKAQGIKLKRSEAYMYSS*LSVLGS
Trigger: AGAGCCAAGTACACTGAGCAATGAGGAGTACATGTA...TGCCTCTGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTTACATGTACTCCTCATaGCTCAGTGTACTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVYMYSS*LSVLGS
Trigger: AGAGCCAAGTACACTGAGCAATGAGGAGTACATGTA...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCCATAAACACTTTGCTTaGGCAGACAGGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPHKHFA*ADRCQC
Trigger: ACACTGACACCTGTCTGCCAAAGCAAAGTGTTTATG...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTCATAAACACTTTGCTTaGGCAGACAGGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVHKHFA*ADRCQC
Trigger: ACACTGACACCTGTCTGCCAAAGCAAAGTGTTTATG...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTACACTAAAGCCCTGTATCATGGGGGTGTaGCTTTTGGGTCTTTATGCT +
Preference number: 5 (lower is better)
Translates to: STGNTGKVTTDLLVTLKPCIMGV*LLGLYA
Trigger: AGCATAAAGACCCAAAAGCAACACCCCCATGATACA...GGGCTTTAGTGTAACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp AACCAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAGTCACTACAGATTTATaGGTTACACTAAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: NQDSLTEATLCRGQSRSSVTTDL*VTLKPR
Trigger: CCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGAC...TGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp CAAGATTCCCTGACAGAAGCTACCCTATGTAGAGGACAAAGTAGGTCTTCAATAGCTCCTAGTTTCCACTaGGGGAATCCATGTGATTTT +
Preference number: 5 (lower is better)
Translates to: QDSLTEATLCRGQSRSSIAPSFH*GNPCDF
Trigger: AAAATCACATGGATTCCCCAAGTGGAAACTAGGAGC...TATTGAAGACCTACTTTGTCCTCTACATAGGGTAGCTTCTGTCAGGGAATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290524.8
ENST00000452671.7
CDS-3UTR CAA 90 bp TTCCCACAGGATAGCACAGGGAATACAGGTAAGGTCACTACAGATTTATTGGTTTCCTTTTGGCATCACTaGCTGTATCCTCTATATCCT +
Preference number: 5 (lower is better)
Translates to: FPQDSTGNTGKVTTDLLVSFWHH*LYPLYP
Trigger: AGGATATAGAGGATACAGCAAGTGATGCCAAAAGGA...AACCAATAAATCTGTAGTGACCTTACCTGTATTCCCTGTGCTATCCTGTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp CACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGTCATGTATCATGGGGGTGTaGCTTTTGGGTCTTTATGCT +
Preference number: 5 (lower is better)
Translates to: HYRFIGYTKAQGIKLKRSCIMGV*LLGLYA
Trigger: AGCATAAAGACCCAAAAGCAACACCCCCATGATACA...TGACCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS-3UTR CAA 90 bp GGTCACTACAGATTTATTGGTTACACTAAAGCCCAGGGTATCAAGCTGAAAAGGGTCACTACAGATTTATaGGTTACACTAAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GHYRFIGYTKAQGIKLKRVTTDL*VTLKPR
Trigger: CCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGAC...CCTTTTCAGCTTGATACCCTGGGCTTTAGTGTAACCAATAAATCTGTAGTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000436637.5
ENST00000452671.7
CDS-3UTR CAA 90 bp CAGAAAATTTCTGTACATCTTGAGGGTGTCAGACTGAAAAAGGACCTTAGAAATGACCTTAGAAATTATTaGACAAGGCCGGGCACGGTG +
Preference number: 5 (lower is better)
Translates to: QKISVHLEGVRLKKDLRNDLRNY*TRPGTV
Trigger: CACCGTGCCCGGCCTTGTCAAATAATTTCTAAGGTC...ATTTCTAAGGTCCTTTTTCAGTCTGACACCCTCAAGATGTACAGAAATTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS-3UTR CAA 90 bp CAGAAAATTTCTGTACATCTTGAGGGTGTCAGACTGAAAAAGGACCTTAGAAATTGCCCAAAGAGATCTTaGCCATCTCCATTCTATCTG +
Preference number: 5 (lower is better)
Translates to: QKISVHLEGVRLKKDLRNCPKRS*PSPFYL
Trigger: CAGATAGAATGGAGATGGCAAAGATCTCTTTGGGCA...ATTTCTAAGGTCCTTTTTCAGTCTGACACCCTCAAGATGTACAGAAATTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS GCA 72 bp CGAGCTCTCAACTACACTCTTCTTCCGCTCTCCACGTaGGAGAGGACCGGCCCCAGTTCGGGCTTCCAGATC +
Preference number: 6 (lower is better)
Translates to: RALNYTLLPLST*ERTGPSSGFQI
Trigger: GATCTGGAAGCCCGAACTGGGGCCGGTCCTCTCGCACGTGGAGAGCGGAAGAAGAGTGTAGTTGAGAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000436637.5
ENST00000452671.7
CDS CAA 90 bp CTTCCTCCCAGGTCCTCCACCCCCAACCTCTCTAGTCAAGGATACTaGGACTGGCCCCGGCCACCAAGCCTTCGAGCTTTGATGTCAGGG +
Preference number: 6 (lower is better)
Translates to: LPPRSSTPNLSSQGY*DWPRPPSLRALMSG
Trigger: CCCTGACATCAAAGCTCGAAGGCTTGGTGGCCGGGGCCAGTCCAAGTATCCTTGACTAGAGAGGTTGGGGGTGGAGGACCTGGGAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469513.5
CDS TCA 72 bp GCTGTAGCAGGAAGCGGGCGACCTCAACGATGGAACTaGAGGACCGTTTCAGGATCCGCTCTGCCCAGTCAC +
Preference number: 6 (lower is better)
Translates to: AVAGSGRPQRWN*RTVSGSALPSH
Trigger: GTGACTGGGCAGAGCGGATCCTGAAACGGTCCTTCAGTTCCATCGTTGAGGTCGCCCGCTTCCTGCTACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000436637.5
ENST00000452671.7
ENST00000475144.1
CDS GCA 72 bp AGGAGCAGAGGCAGCCGAGCCACTAGGGCATTAACCTaGAGGTTATTGGCTCCTGGGGCCGAGCTCTCAACT +
Preference number: 6 (lower is better)
Translates to: RSRGSRATRALT*RLLAPGAELST
Trigger: AGTTGAGAGCTCGGCCCCAGGAGCCAATAACCTGCAGGTTAATGCCCTAGTGGCTCGGCTGCCTCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000452671.7
CDS CAA 72 bp AGGTCCTCCACCCCCAACCTCTCTAGTCAAGGATACTaGGACTGGCCCCGGCCACCAAGCCTTCGAGCTTTG +
Preference number: 6 (lower is better)
Translates to: RSSTPNLSSQGY*DWPRPPSLRAL
Trigger: CAAAGCTCGAAGGCTTGGTGGCCGGGGCCAGTCCAAGTATCCTTGACTAGAGAGGTTGGGGGTGGAGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469513.5
CDS TCA 72 bp TTCTGCACGGCCTTGGAAATGGTACCTCGGAGCCTCTaGAGAAGGGTGGTAGGTTCCCCAGCCTCAGCACCA +
Preference number: 6 (lower is better)
Translates to: FCTALEMVPRSL*RRVVGSPASAP
Trigger: TGGTGCTGAGGCTGGGGAACCTACCACCCTTCTTCAGAGGCTCCGAGGTACCATTTCCAAGGCCGTGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000412774.5
ENST00000422595.5
ENST00000430227.5
ENST00000436271.5
ENST00000437327.5
ENST00000444392.5
ENST00000450506.5
ENST00000452456.1
ENST00000452671.7
ENST00000458484.5
ENST00000478564.5
ENST00000479681.5
CDS GCA 72 bp AGCACATGGGCATGTGCAGATCGGGCAGAGATGAGATaGTGCTGTAGCAGGAAGCGGGCGACCTCAACGATG +
Preference number: 6 (lower is better)
Translates to: STWACADRAEMR*CCSRKRATSTM
Trigger: CATCGTTGAGGTCGCCCGCTTCCTGCTACAGCAGCATCTCATCTCTGCCCGATCTGCACATGCCCATGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000436637.5
ENST00000452671.7
ENST00000475144.1
CDS CCA 72 bp GGCACACGCTGCCTCCACCAGTTCATCTCGAGGTGCTaGGGTTACTTCTGGGCCCATTTCTGGACTCTCAGA +
Preference number: 6 (lower is better)
Translates to: GTRCLHQFISRC*GYFWAHFWTLR
Trigger: TCTGAGAGTCCAGAAATGGGCCCAGAAGTAACCCCAGCACCTCGAGATGAACTGGTGGAGGCAGCGTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000422595.5
ENST00000436637.5
ENST00000452671.7
ENST00000475144.1
CDS CCA 72 bp TCGTCCTCTTCAGCGAGCCCCATGGCCTTAAGCACATaGGCATGTGCAGATCGGGCAGAGATGAGATGCTGC +
Preference number: 6 (lower is better)
Translates to: SSSSASPMALST*ACADRAEMRCC
Trigger: GCAGCATCTCATCTCTGCCCGATCTGCACATGCCCATGTGCTTAAGGCCATGGGGCTCGCTGAAGAGGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000436637.5
ENST00000452671.7
CDS TCA 72 bp TTTGTTCTGCACGGCGAAATGGTACCTCGGAGCCTCTaGAGAAGGGTGGTAGGTTCCCCAGCCTCAGCACCA +
Preference number: 6 (lower is better)
Translates to: FVLHGEMVPRSL*RRVVGSPASAP
Trigger: TGGTGCTGAGGCTGGGGAACCTACCACCCTTCTTCAGAGGCTCCGAGGTACCATTTCGCCGTGCAGAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421986.5
ENST00000494217.5
CDS GCA 72 bp ACATGGGCATGTGCAGATCGGGCAGAGATGAGATGCTaGTGTAGCAGGAAGCGGGCGACCTCAACGATGGAA +
Preference number: 6 (lower is better)
Translates to: TWACADRAEMRC*CSRKRATSTME
Trigger: TTCCATCGTTGAGGTCGCCCGCTTCCTGCTACAGCAGCATCTCATCTCTGCCCGATCTGCACATGCCCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000436637.5
ENST00000452671.7
ENST00000475144.1
CDS CCA 72 bp CTTTGGTATGCTGGGAACCGGGGCCCCTTCCTCCTTTaGAAACAGTACCATCTCCCTGACCCTGGGCAAGTA +
Preference number: 6 (lower is better)
Translates to: LWYAGNRGPFLL*KQYHLPDPGQV
Trigger: TACTTGCCCAGGGTCAGGGAGATGGTACTGTTTCCAAAGGAGGAAGGGGCCCCGGTTCCCAGCATACCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000452671.7
CDS CCA 72 bp TCCACCCCCAACCTCTCTAGTCAAGGATACTTGGACTaGCCCCGGCCACCAAGCCTTCGAGCTTTGATGTCA +
Preference number: 6 (lower is better)
Translates to: STPNLSSQGYLD*PRPPSLRALMS
Trigger: TGACATCAAAGCTCGAAGGCTTGGTGGCCGGGGCCAGTCCAAGTATCCTTGACTAGAGAGGTTGGGGGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469513.5
CDS TCA 72 bp GTGGGCGGCAACAGGCAAGACTCTCACAGTACTTCCTaGGTGAGAGGGGAGCAGAGTGGGAAGATACTCAGA +
Preference number: 6 (lower is better)
Translates to: VGGNRQDSHSTS*VRGEQSGKILR
Trigger: TCTGAGTATCTTCCCACTCTGCTCCCCTCTCACTCAGGAAGTACTGTGAGAGTCTTGCCTGTTGCCGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475144.1
CDS CCA 72 bp CAGAGGAGAATGGACTTCCTGCAGGTTATTGGCTCCTaGGGCCGAGCTCTCAACTACACTCTTCTTCCGCTC +
Preference number: 6 (lower is better)
Translates to: QRRMDFLQVIGS*GRALNYTLLPL
Trigger: GAGCGGAAGAAGAGTGTAGTTGAGAGCTCGGCCCCAGGAGCCAATAACCTGCAGGAAGTCCATTCTCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436637.5
CDS CCA 72 bp CTCTCACAGTACTTCCTGAGTGAGAGGGGAGCAGAGTaGGAAGATACTCAGAGAAGGAGGCCATGGGTAGGC +
Preference number: 6 (lower is better)
Translates to: LSQYFLSERGAE*EDTQRRRPWVG
Trigger: GCCTACCCATGGCCTCCTTCTCTGAGTATCTTCCCACTCTGCTCCCCTCTCACTCAGGAAGTACTGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475144.1
CDS CCA 72 bp CTCTCTGATGATCTTGCCAAAGTTGGCTGTGCTGAGTaGGCGGCAACAGGCAAGACTCTCACAGTACTTCCG +
Preference number: 6 (lower is better)
Translates to: LSDDLAKVGCAE*AATGKTLTVLP
Trigger: CGGAAGTACTGTGAGAGTCTTGCCTGTTGCCGCCCACTCAGCACAGCCAACTTTGGCAAGATCATCAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000422595.5
ENST00000436637.5
ENST00000450506.5
ENST00000452671.7
ENST00000458484.5
ENST00000469513.5
CDS CCA 72 bp TGCTGTATCCTCTATATCCTGCTTTGCTGCTTTAGCTaGTGGAGCCTGCCCACTGGCCTCACTCACAGGTAC +
Preference number: 6 (lower is better)
Translates to: CCILYILLCCFS*WSLPTGLTHRY
Trigger: GTACCTGTGAGTGAGGCCAGTGGGCAGGCTCCACCAGCTAAAGCAGCAAAGCAGGATATAGAGGATACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000452671.7
CDS CAA 72 bp TACTTGGACTGGCCCCGGCCACCAAGCCTTCGAGCTTaGATGTCAGGGAAGATCTCTCTGATGATCTTGCCA +
Preference number: 6 (lower is better)
Translates to: YLDWPRPPSLRA*MSGKISLMILP
Trigger: TGGCAAGATCATCAGAGAGATCTTCCCTGACATCAAAGCTCGAAGGCTTGGTGGCCGGGGCCAGTCCAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469513.5
CDS CAA 90 bp CCAAGCCTTCGAGCTTTGATGTCAGGGAAGATCTCTCTGATGATCTaGCCAAAGTTGGCTGTGCTGAGTGGGCGGCAACAGGCAAGACTC +
Preference number: 6 (lower is better)
Translates to: PSLRALMSGKISLMI*PKLAVLSGRQQARL
Trigger: GAGTCTTGCCTGTTGCCGCCCACTCAGCACAGCCAACTTTGGCAAGATCATCAGAGAGATCTTCCCTGACATCAAAGCTCGAAGGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000422595.5
ENST00000436637.5
ENST00000450506.5
ENST00000452671.7
ENST00000458484.5
ENST00000469513.5
ENST00000475144.1
CDS CCA 72 bp TCAGCTGTCCTCTTGACACCCTTGTCATGTGGTCCTTaGTCACCACCTATGCCTACCTCTCTGTTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: SAVLLTPLSCGP*SPPMPTSLFSV
Trigger: CACAGAGAACAGAGAGGTAGGCATAGGTGGTGACCAAGGACCACATGACAAGGGTGTCAAGAGGACAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000452671.7
CDS CCA 72 bp TGTATCCTCTATATCCTGCTTTGCTGCTTTAGCTGGTaGAGCCTGCCCACTGGCCTCACTCACAGGTACTTC +
Preference number: 6 (lower is better)
Translates to: CILYILLCCFSW*SLPTGLTHRYF
Trigger: GAAGTACCTGTGAGTGAGGCCAGTGGGCAGGCTCCACCAGCTAAAGCAGCAAAGCAGGATATAGAGGATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000452671.7
CDS CCA 72 bp CTCTCTGATGATCTTGCCAAAGTTGGCTGTGCTGAGTaGGCGGCAACAGGCAAGACTCTCACAGTACTTCCT +
Preference number: 6 (lower is better)
Translates to: LSDDLAKVGCAE*AATGKTLTVLP
Trigger: AGGAAGTACTGTGAGAGTCTTGCCTGTTGCCGCCCACTCAGCACAGCCAACTTTGGCAAGATCATCAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475144.1
CDS CAA 72 bp ATGTCAGGGAAGATCTCTCTGATGATCTTGCCAAAGTaGGCTGTGCTGAGTGGGCGGCAACAGGCAAGACTC +
Preference number: 6 (lower is better)
Translates to: MSGKISLMILPK*AVLSGRQQARL
Trigger: GAGTCTTGCCTGTTGCCGCCCACTCAGCACAGCCAACTTTGGCAAGATCATCAGAGAGATCTTCCCTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000422595.5
ENST00000436637.5
ENST00000450506.5
ENST00000452671.7
ENST00000458484.5
ENST00000469513.5
ENST00000475144.1
CDS CAA 72 bp CGAGCTTTGATGTCAGGGAAGATCTCTCTGATGATCTaGCCAAAGTTGGCTGTGCTGAGTGGGCGGCAACAG +
Preference number: 6 (lower is better)
Translates to: RALMSGKISLMI*PKLAVLSGRQQ
Trigger: CTGTTGCCGCCCACTCAGCACAGCCAACTTTGGCAAGATCATCAGAGAGATCTTCCCTGACATCAAAGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000422595.5
ENST00000436637.5
ENST00000450506.5
ENST00000452671.7
ENST00000458484.5
ENST00000469513.5
ENST00000475144.1
CDS CAA 72 bp TATTTGGACTGGCCCCGGCCACCAAGCCTTCGAGCTTaGATGTCAGGGAAGATCTCTCTGATGATCTTGCCA +
Preference number: 6 (lower is better)
Translates to: YLDWPRPPSLRA*MSGKISLMILP
Trigger: TGGCAAGATCATCAGAGAGATCTTCCCTGACATCAAAGCTCGAAGGCTTGGTGGCCGGGGCCAGTCCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000422595.5
ENST00000436637.5
ENST00000450506.5
ENST00000452671.7
ENST00000458484.5
ENST00000475144.1
CDS CAA 72 bp ATGGTGAAACCCCGTTTCTACAGGATCCCCTCTACTTaGTTCTGCACGGCCTTGGAAATGGTACCTCGGAGC +
Preference number: 6 (lower is better)
Translates to: MVKPRFYRIPST*FCTALEMVPRS
Trigger: GCTCCGAGGTACCATTTCCAAGGCCGTGCAGAACAAAGTAGAGGGGATCCTGTAGAAACGGGGTTTCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444392.5
ENST00000452456.1
CDS CAA 90 bp CGAGCTTTGATGTCAGGGAAGATCTCTCTGATGATCTTGCCAAAGTaGGCTGTGCTGAGTGGGCGGCAACAGGCAAGACTCTCACAGTAC +
Preference number: 6 (lower is better)
Translates to: RALMSGKISLMILPK*AVLSGRQQARLSQY
Trigger: GTACTGTGAGAGTCTTGCCTGTTGCCGCCCACTCAGCACAGCCAACTTTGGCAAGATCATCAGAGAGATCTTCCCTGACATCAAAGCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000422595.5
ENST00000436637.5
ENST00000450506.5
ENST00000452671.7
ENST00000458484.5
ENST00000469513.5
ENST00000475144.1
CDS CAA 90 bp AGTCAAGGATACTTGGACTGGCCCCGGCCACCAAGCCTTCGAGCTTaGATGTCAGGGAAGATCTCTCTGATGATCTTGCCAAAGTTGGCT +
Preference number: 6 (lower is better)
Translates to: SQGYLDWPRPPSLRA*MSGKISLMILPKLA
Trigger: AGCCAACTTTGGCAAGATCATCAGAGAGATCTTCCCTGACATCAAAGCTCGAAGGCTTGGTGGCCGGGGCCAGTCCAAGTATCCTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469513.5
CDS CCA 72 bp AGGTACTTCAGCTGTCCTCTTGACACCCTTGTCATGTaGTCCTTGGTCACCACCTATGCCTACCTCTCTGTT +
Preference number: 6 (lower is better)
Translates to: RYFSCPLDTLVM*SLVTTYAYLSV
Trigger: AACAGAGAGGTAGGCATAGGTGGTGACCAAGGACCACATGACAAGGGTGTCAAGAGGACAGCTGAAGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000452671.7
CDS CAA 72 bp TTCAGCTGTCCTCTTGACACCCTTGTCATGTGGTCCTaGGTCACCACCTATGCCTACCTCTCTGTTCTCTGT +
Preference number: 6 (lower is better)
Translates to: FSCPLDTLVMWS*VTTYAYLSVLC
Trigger: ACAGAGAACAGAGAGGTAGGCATAGGTGGTGACCAAGGACCACATGACAAGGGTGTCAAGAGGACAGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000452671.7
CDS CAA 72 bp CTTTATTACCCTGTGGTGCAGTGTCTACCTCTCCCTTaGCCAAAGGAAAAGCCTCCTTTTGGCTTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LYYPVVQCLPLP*PKEKPPFGFCC
Trigger: GCAGCAGAAGCCAAAAGGAGGCTTTTCCTTTGGCAAAGGGAGAGGTAGACACTGCACCACAGGGTAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000392746.7
ENST00000452671.7
CDS TCA 72 bp CCAGCCGGCTCGTGCGTTGCTTTATTTTCCTTTTTCTaGATGGTTGTAACAGCCGCGATCTGCCTAGATACA +
Preference number: 6 (lower is better)
Translates to: PAGSCVALFSFF*MVVTAAICLDT
Trigger: TGTATCTAGGCAGATCGCGGCTGTTACAACCATTCAGAAAAAGGAAAATAAAGCAACGCACGAGCCGGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368870.6
CDS CAA 72 bp TCTTCCCCACAGACCTGTATCATGGGGGTGTTGCTTTaGGGTCTTTATGCTCCTGGGATAAGGAACTTTGAA +
Preference number: 6 (lower is better)
Translates to: SSPQTCIMGVLL*GLYAPGIRNFE
Trigger: TTCAAAGTTCCTTATCCCAGGAGCATAAAGACCCAAAAGCAACACCCCCATGATACAGGTCTGTGGGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS CAA 90 bp TATAAACACTCTTCCCCACAGACCTGTATCATGGGGGTGTTGCTTTaGGGTCTTTATGCTCCTGGGATAAGGAACTTTGAAGCACATGCT +
Preference number: 6 (lower is better)
Translates to: YKHSSPQTCIMGVLL*GLYAPGIRNFEAHA
Trigger: AGCATGTGCTTCAAAGTTCCTTATCCCAGGAGCATAAAGACCCAAAAGCAACACCCCCATGATACAGGTCTGTGGGGAAGAGTGTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7
CDS TCA 72 bp GCTTTTGGGTCTTTATGCTCCTGGGATAAGGAACTTTaGAGCACATGCTCCTTTAAGTCTTTATTACCCTGT +
Preference number: 6 (lower is better)
Translates to: AFGSLCSWDKEL*STCSFKSLLPC
Trigger: ACAGGGTAATAAAGACTTAAAGGAGCATGTGCTTCAAAGTTCCTTATCCCAGGAGCATAAAGACCCAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290524.8
ENST00000368870.6
ENST00000452671.7