RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RFX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000087903

Ensembl transcript IDs: ENST00000303657.10, ENST00000359161.7, ENST00000586302.5, ENST00000586806.1, ENST00000586940.1, ENST00000587181.1, ENST00000587700.1, ENST00000588021.5, ENST00000589340.1, ENST00000589523.1, ENST00000589641.1, ENST00000589712.1, ENST00000589742.5, ENST00000590778.1, ENST00000590822.1, ENST00000592172.5, ENST00000592281.5, ENST00000592337.1, ENST00000592473.5, ENST00000592546.5, ENST00000592883.5, ENST00000593241.5

Found 700 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGATGGGTTCCTaGAGCACAGCCGGCCTCCCGCCTCGGGGCATCCGGCAGGGAGGT +
Preference number: 1 (lower is better)
Translates to: LSAAPQVLWHLEMGS*STAGLPPRGIRQGG
Trigger: ACCTCCCTGCCGGATGCCCCGAGGCGGGAGGCCGGCTGTGCTGCAGGAACCCATCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CCA 90 bp CACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGATaGGTTCCTGCAGCACAGCCGGCCTCCCGCCTCGGGGCATCCGGC +
Preference number: 1 (lower is better)
Translates to: HSDCQLPLKSFGIWR*VPAAQPASRLGASG
Trigger: GCCGGATGCCCCGAGGCGGGAGGCCGGCTGTGCTGCAGGAACCCATCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CCA 90 bp CCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTaGAGATGGGTTCCTGCAGCACAGCCGGCCTCCCGCCTCGGGGCA +
Preference number: 1 (lower is better)
Translates to: PGHSDCQLPLKSFGI*RWVPAAQPASRLGA
Trigger: TGCCCCGAGGCGGGAGGCCGGCTGTGCTGCAGGAACCCATCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR TCA 90 bp CTCCCACATGGTGCTACCAGACAAGGGCACTCCACTTTCCATTCCTaGGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCG +
Preference number: 1 (lower is better)
Translates to: LPHGATRQGHSTFHS*GDSRDAGELCASPA
Trigger: CGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGGAGTGCCCTTGTCTGGTAGCACCATGTGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CCA 90 bp GGATCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTaGCATCTGGAGATGGGTTCCTGCAGCACAGCCGGCCTCCCGCCT +
Preference number: 1 (lower is better)
Translates to: GSAGTQRLSAAPQVL*HLEMGSCSTAGLPP
Trigger: AGGCGGGAGGCCGGCTGTGCTGCAGGAACCCATCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CCA 90 bp GCAGGGAGGTCTGGATCTAAAAGGCCACAGGGCGCTGCGCCCAGCTaGGTCCCTCCCACATGGTGCTACCAGACAAGGGCACTCCACTTT +
Preference number: 1 (lower is better)
Translates to: AGRSGSKRPQGAAPS*VPPTWCYQTRALHF
Trigger: AAAGTGGAGTGCCCTTGTCTGGTAGCACCATGTGGGAGGGACCCAGCTGGGCGCAGCGCCCTGTGGCCTTTTAGATCCAGACCTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR TCA 90 bp AGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGTaGCCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGCCGGCCGGG +
Preference number: 1 (lower is better)
Translates to: RGTNLVEPVKSRFPE*PGGIFWNLEEAPAG
Trigger: CCCGGCCGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR CCA 90 bp CCGTGGAGCGGGACGCAGGCACTGCTGTTTGGACGACACGCGGGATaGCTGCTTTCTGAAGTTGTGGCTGTGACACTGACCCTGTTGGAC +
Preference number: 1 (lower is better)
Translates to: PWSGTQALLFGRHAG*LLSEVVAVTLTLLD
Trigger: GTCCAACAGGGTCAGTGTCACAGCCACAACTTCAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCCGCTCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CCA 90 bp ATCGCGTCCTGGGCCGAGGCTCGTCTTTCTTCTCTGCAGTTGGTTTaGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTAC +
Preference number: 1 (lower is better)
Translates to: IASWAEARLSSLQLV*GQNSSTQLSNCSGY
Trigger: GTAGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGAAAGACGAGCCTCGGCCCAGGACGCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR TCA 90 bp GACGCAGGCACTGCTGTTTGGACGACACGCGGGATGGCTGCTTTCTaGAGTTGTGGCTGTGACACTGACCCTGTTGGACAAACTCCTTCC +
Preference number: 1 (lower is better)
Translates to: DAGTAVWTTRGMAAF*SCGCDTDPVGQTPS
Trigger: GGAAGGAGTTTGTCCAACAGGGTCAGTGTCACAGCCACAACTTCAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR GCA 90 bp TTCTTTTTCGAGCTGCGGATCTGCCGGGACACAGCGATTGTCAGCTaGCCCTCAAGTCCTTTGGCATCTGGAGATGGGTTCCTGCAGCAC +
Preference number: 1 (lower is better)
Translates to: FFFELRICRDTAIVS*PSSPLASGDGFLQH
Trigger: GTGCTGCAGGAACCCATCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGATCCGCAGCTCGAAAAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR GCA 90 bp CTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTaGAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAG +
Preference number: 1 (lower is better)
Translates to: LQLVWGQNSSTQLSN*SGYVFPWRQTWCLK
Trigger: CTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CCA 90 bp AACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATaGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGAAAGTCCCG +
Preference number: 1 (lower is better)
Translates to: NSSTQLSNCSGYVFP*RQTWCLKFRASKVP
Trigger: CGGGACTTTCGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CCA 90 bp CAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTaGTGTCTCAAGTTCAGGGCTTCGAAAGTCCCGAATATTTGTTTG +
Preference number: 1 (lower is better)
Translates to: QLSNCSGYVFPWRQT*CLKFRASKVPNICL
Trigger: CAAACAAATATTCGGGACTTTCGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp AGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTGCTCCGGGATTAGTTCAGAGGGGACTCCAGGGACGCTaGCGAGCTCTGTGCCTCCCC +
Preference number: 2 (lower is better)
Translates to: RGPGGTRWGWGAPGLVQRGLQGR*RALCLP
Trigger: GGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCC...CCTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCCACCTGGACCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp GCACCCCTCACTCTGGCGCAGGCCCAGCGATGCTCTGAGCTCCTGCGGGCGGGGTCCTTCCACAGCCAGTaGCTTGATGGTGACGGTGAA +
Preference number: 2 (lower is better)
Translates to: APLTLAQAQRCSELLRAGSFHSQ*LDGDGE
Trigger: TTCACCGTCACCATCAAGCCACTGGCTGTGGAAGGA...CCCCGCCCGCAGGAGCTCAGAGCATCGCTGGGCCTGCGCCAGAGTGAGGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303657.10
3UTR-3UTR TCA 90 bp GTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCCCGGGAGCCCCCGCTTaGGTCAAAGTAAACATCACA +
Preference number: 2 (lower is better)
Translates to: VAAQGPGDPEHSYSQWEPPGAPA*VKVNIT
Trigger: TGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGG...GGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR-3UTR GCA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGCGCTGGCGAGCTCTGTaGCTCCCCAGCGGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLERWRAL*LPSGGR
Trigger: CCTGCCACCGCTGGGGAGGCACAGAGCTCGCCAGCG...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp CTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGGGTCTGGTGGGGCCCTaGTGGCTGCGCAGGGACCTG +
Preference number: 2 (lower is better)
Translates to: LCSWFGDRTPARSCPTAAGLVGP*WLRRDL
Trigger: CAGGTCCCTGCGCAGCCACCAGGGCCCCACCAGACC...CGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp AGCGGGACGCAGGCACTGCTGTTTGGACGACACGCGGGATGGCTGCTTTCTGAAGTGCCTCCCCAGCGGTaGCAGGTAGGAGGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: SGTQALLFGRHAGWLLSEVPPQR*QVGGER
Trigger: CCTCTCCCCTCCTACCTGCCACCGCTGGGGAGGCAC...TTCAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR TCA 90 bp AGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTGCTCCGGGATTAGTTCAGAGGTTCCTTCTTGAACACTaGCCCCGGGAGCCCCCGCTT +
Preference number: 2 (lower is better)
Translates to: RGPGGTRWGWGAPGLVQRFLLEH*PREPPL
Trigger: AAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGAA...CCTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCCACCTGGACCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR GCA 90 bp TGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTCTGGAGATGGGTTCCTaGAGCACAGCCGGCCTCCCG +
Preference number: 2 (lower is better)
Translates to: CSWFGDRTPARSCPTAAALEMGS*STAGLP
Trigger: CGGGAGGCCGGCTGTGCTGCAGGAACCCATCTCCAG...AGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGGGCTGCGCAGGGACCTaGGGACCCAGAGCACAGCTA +
Preference number: 2 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLEGCAGT*GPRAQL
Trigger: TAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp TGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTTTGAAGAGGTCCAGGTaGGACTCGCTGGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: CSWFGDRTPARSCPTAAALKRSR*DSLGVG
Trigger: CCCCACCCCCAGCGAGTCCCACCTGGACCTCTTCAA...AGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCCCAGGCGGCATCTTTTaGAACCTCGAGGAGGCGCCG +
Preference number: 2 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSPGGIF*NLEEAP
Trigger: CGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGG...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR CAA 90 bp AATCGCGTCCTGGGCCGAGGCTCGTCTTTCTTCTCTGCAGTTGGTTaGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTA +
Preference number: 2 (lower is better)
Translates to: NRVLGRGSSFFSAVG*GTELQHAAVQLQRL
Trigger: TAGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGAAAGACGAGCCTCGGCCCAGGACGCGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR TCA 90 bp GAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACATTCCTTCTTGAACACTaGCCCCGGGAGCCCCCGCTT +
Preference number: 2 (lower is better)
Translates to: ELQHAAVQLQRLRVSMETFLLEH*PREPPL
Trigger: AAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGAA...TGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp CTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCAGGCGGCATCTTTTaGAACCTCGAGGAGGCGCCG +
Preference number: 2 (lower is better)
Translates to: LGPKSRVPAEEGLSRIRNPGGIF*NLEEAP
Trigger: CGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGG...GTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR-3UTR TCA 90 bp CAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGTCCAGGTTCCCAGAGTaGCCAGGCGGCATCTTTTGG +
Preference number: 2 (lower is better)
Translates to: QPFQLLKGLGPKSRVPAESRFPE*PGGIFW
Trigger: CCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGA...CTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR TCA 90 bp GCCAGTGGGAGCCCTGGCCTGGGCTTCTGTAGCTTCAACAACTGCTTTCCTTCTTCCAGGTTCCCAGAGTaGCCAGGCGGCATCTTTTGG +
Preference number: 2 (lower is better)
Translates to: ASGSPGLGFCSFNNCFPSSRFPE*PGGIFW
Trigger: CCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGA...AGAAGGAAAGCAGTTGTTGAAGCTACAGAAGCCCAGGCCAGGGCTCCCACTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR-3UTR TCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCTCCAGGTTCCCAGAGTaGCCAGGCGGCATCTTTTGG +
Preference number: 2 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSSRFPE*PGGIFW
Trigger: CCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGA...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR-3UTR TCA 90 bp GGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTGGCTGCATTTGGTGGAGCCGGTaGAATCCAGGTTCCCAGAGT +
Preference number: 2 (lower is better)
Translates to: GGFVQNKEPMVWWGPGGCIWWSR*NPGSQS
Trigger: ACTCTGGGAACCTGGATTTCACCGGCTCCACCAAAT...GCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR-3UTR CCA 90 bp CTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCCCCTCAAGTCCTTTaGCATCTGGAGATGGGTTCC +
Preference number: 2 (lower is better)
Translates to: LCSWFGDRTPARSCPTAAAPQVL*HLEMGS
Trigger: GGAACCCATCTCCAGATGCCAAAGGACTTGAGGGGC...CGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCACAGAGGGAGGTGTTCTaGAAGACTCCGTGGAGCGGG +
Preference number: 2 (lower is better)
Translates to: LLCSWFGDRTPARSCPTAQREVF*KTPWSG
Trigger: CCCGCTCCACGGAGTCTTCCAGAACACCTCCCTCTG...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CAA 90 bp TTAGAAATCGCGTCCTGGGCCGAGGCTCGTCTTTCTTCTCTGCAGTaGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGC +
Preference number: 2 (lower is better)
Translates to: LEIASWAEARLSSLQ*VWGQNSSTQLSNCS
Trigger: GCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGAAAGACGAGCCTCGGCCCAGGACGCGATTTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR TCA 90 bp AGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTCCGGGAGCCCCCGCTTaGGTCAAAGTAAACATCACA +
Preference number: 2 (lower is better)
Translates to: SRGGFVQNKEPMVWWGPGPGAPA*VKVNIT
Trigger: TGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGG...ACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR-3UTR TCA 90 bp CTCAGCACAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAACTGCTTTCCTTCTTaGACACTGACCCCGGGAGCC +
Preference number: 2 (lower is better)
Translates to: LSTALSALKGTGAKVQGSNCFPS*TLTPGA
Trigger: GGCTCCCGGGGTCAGTGTTCAAGAAGGAAAGCAGTT...GGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTGTGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR GCA 90 bp TCTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCGTCCCTCCCACATGGTaGTACCAGACAAGGGCACTC +
Preference number: 2 (lower is better)
Translates to: SSLQLVWGQNSSTQLSNCVPPTW*YQTRAL
Trigger: GAGTGCCCTTGTCTGGTAGCACCATGTGGGAGGGAC...GCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp AACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGGCTGCGCAGGGACCTaGGGACCCAGAGCACAGCTA +
Preference number: 2 (lower is better)
Translates to: NCSGYVFPWRQTWCLKFRGCAGT*GPRAQL
Trigger: TAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC...CCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR TCA 90 bp CTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGAAAAATTGGTTCCAGTTaGGTGCAGAGGCCAGTGCTC +
Preference number: 2 (lower is better)
Translates to: LPGHSDCQLPLKSFGIWRKIGSS*VQRPVL
Trigger: GAGCACTGGCCTCTGCACTCAACTGGAACCAATTTT...TCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp GGAAAAGCCGGGCATTACAATCCGTTAACTGTGAGCTTCAGTGTCTCCAAGGAGAAGGAACCCATGGTCTaGTGGGGCCCTGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: GKAGHYNPLTVSFSVSKEKEPMV*WGPGGC
Trigger: GCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTT...CTCCTTGGAGACACTGAAGCTCACAGTTAACGGATTGTAATGCCCGGCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303657.10
3UTR-3UTR CCA 90 bp CACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGGCCCCTCAAGTCCTTTaGCATCTGGAGATGGGTTCC +
Preference number: 2 (lower is better)
Translates to: HAAVQLQRLRVSMETNLVAPQVL*HLEMGS
Trigger: GGAACCCATCTCCAGATGCCAAAGGACTTGAGGGGC...CACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CAA 90 bp GGGCTTCGAAAGTCCCGAATATTTGTTTGTCCCGAGAGAAGAGTTTaGACTTTGAAGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTGC +
Preference number: 2 (lower is better)
Translates to: GLRKSRIFVCPERRV*TLKRSRWDSLGVGC
Trigger: GCACCCCACCCCCAGCGAGTCCCACCTGGACCTCTTCAAAGTCAAAACTCTTCTCTCGGGACAAACAAATATTCGGGACTTTCGAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR TCA 90 bp TCTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCATTTGGTGGAGCCGGTaGAATCCAGGTTCCCAGAGT +
Preference number: 2 (lower is better)
Translates to: SSLQLVWGQNSSTQLSNCIWWSR*NPGSQS
Trigger: ACTCTGGGAACCTGGATTTCACCGGCTCCACCAAAT...GCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR GCA 90 bp TCTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCTTGGTTCCAGTTGAGTaGAGAGGCCAGTGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: SSLQLVWGQNSSTQLSNCLVPVE*RGQCSQ
Trigger: CTGAGAGCACTGGCCTCTGCACTCAACTGGAACCAA...GCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp AACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCAGGCACTGCTGTTTaGACGACACGCGGGATGGCT +
Preference number: 2 (lower is better)
Translates to: NCSGYVFPWRQTWCLKFRAGTAV*TTRGMA
Trigger: AGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGC...CCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp GGAAAAGCCGGGCATTACAATCCGTTAACTGTGAGCTTCAGTGTCTCCAAGGAGTTCTGGAAGACTCCGTaGAGCGGGACGCAGGCACTG +
Preference number: 2 (lower is better)
Translates to: GKAGHYNPLTVSFSVSKEFWKTP*SGTQAL
Trigger: CAGTGCCTGCGTCCCGCTCCACGGAGTCTTCCAGAA...CTCCTTGGAGACACTGAAGCTCACAGTTAACGGATTGTAATGCCCGGCTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
3UTR-3UTR TCA 90 bp AGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGCCGGGAGCCCCCGCTTaGGTCAAAGTAAACATCACA +
Preference number: 2 (lower is better)
Translates to: SGYVFPWRQTWCLKFRASPGAPA*VKVNIT
Trigger: TGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGG...CGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR GCA 90 bp AGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGTTGGTTCCAGTTGAGTaGAGAGGCCAGTGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: SGYVFPWRQTWCLKFRASLVPVE*RGQCSQ
Trigger: CTGAGAGCACTGGCCTCTGCACTCAACTGGAACCAA...CGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp TCTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCGGCTACGTGTTTCCATaGAGACAAACTTGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: SSLQLVWGQNSSTQLSNCGYVFP*RQTWCL
Trigger: GAGACACCAAGTTTGTCTCCATGGAAACACGTAGCC...GCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp AGAGAAAACTATTGCATTTCGTTAGAAATCGCGTCCTGGGCCGAGGCTCGTCTTAGAATAAGGAACCCATaGTCTGGTGGGGCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: RENYCISLEIASWAEARLRIRNP*SGGALV
Trigger: CACCAGGGCCCCACCAGACCATGGGTTCCTTATTCT...AAGACGAGCCTCGGCCCAGGACGCGATTTCTAACGAAATGCAATAGTTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR GCA 90 bp AGAGAAAACTATTGCATTTCGTTAGAAATCGCGTCCTGGGCCGAGGCTCGTCTTACAGCGATTGTCAGCTaGCCCTCAAGTCCTTTGGCA +
Preference number: 2 (lower is better)
Translates to: RENYCISLEIASWAEARLTAIVS*PSSPLA
Trigger: TGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGT...AAGACGAGCCTCGGCCCAGGACGCGATTTCTAACGAAATGCAATAGTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CAA 90 bp GCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTaGGTGTCTCAAGTTCAGGGCTTCGAAAGTCCCGAATATTTGTTT +
Preference number: 2 (lower is better)
Translates to: AAVQLQRLRVSMETN*VSQVQGFESPEYLF
Trigger: AAACAAATATTCGGGACTTTCGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR GCA 90 bp GACAAACAGTGTGATTATTCCCAGCTTTTCGTTTCTAAAGTGAGCACGCGTCTTGATGCTCTGAGCTCCTaGGGGCGGGGAAGTAGGTTT +
Preference number: 2 (lower is better)
Translates to: DKQCDYSQLFVSKVSTRLDALSS*GRGSRF
Trigger: AAACCTACTTCCCCGCCCGCAGGAGCTCAGAGCATC...AAGACGCGTGCTCACTTTAGAAACGAAAAGCTGGGAATAATCACACTGTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303657.10
3UTR-3UTR GCA 90 bp CTAAGGTTTGGGCTATACGACCAGACAAACAGTGTGATTATTCCCAGCTTTTCGACAGCGATTGTCAGCTaGCCCTCAAGTCCTTTGGCA +
Preference number: 2 (lower is better)
Translates to: LRFGLYDQTNSVIIPSFSTAIVS*PSSPLA
Trigger: TGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGT...CGAAAAGCTGGGAATAATCACACTGTTTGTCTGGTCGTATAGCCCAAACCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
3UTR-3UTR CCA 90 bp TTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGAAAGTCCCGAATAAGTCCTTTGGCATCTaGAGATGGGTTCCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: FPWRQTWCLKFRASKVPNKSFGI*RWVPAA
Trigger: TGCTGCAGGAACCCATCTCCAGATGCCAAAGGACTT...ATTCGGGACTTTCGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CCA 90 bp GGAAAAGCCGGGCATTACAATCCGTTAACTGTGAGCTTCAGTGTCTCCAAGGAGATTTCAACTAAGGTTTaGGCTATACGACCAGACAAA +
Preference number: 2 (lower is better)
Translates to: GKAGHYNPLTVSFSVSKEISTKV*AIRPDK
Trigger: TTTGTCTGGTCGTATAGCCCAAACCTTAGTTGAAAT...CTCCTTGGAGACACTGAAGCTCACAGTTAACGGATTGTAATGCCCGGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
3UTR-3UTR CAA 90 bp GCACCCCTCACTCTGGCGCAGGCCCAGCGATGCTCTGAGCTCCTGCGGGCGGGGCGCAGGCACTGCTGTTaGGACGACACGCGGGATGGC +
Preference number: 3 (lower is better)
Translates to: APLTLAQAQRCSELLRAGRRHCC*DDTRDG
Trigger: GCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCG...CCCCGCCCGCAGGAGCTCAGAGCATCGCTGGGCCTGCGCCAGAGTGAGGGGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303657.10
3UTR GCA 72 bp GCCCCTCAAGTCCTTTGGCATCTGGAGATGGGTTCCTaGAGCACAGCCGGCCTCCCGCCTCGGGGCATCCGG +
Preference number: 3 (lower is better)
Translates to: APQVLWHLEMGS*STAGLPPRGIR
Trigger: CCGGATGCCCCGAGGCGGGAGGCCGGCTGTGCTGCAGGAACCCATCTCCAGATGCCAAAGGACTTGAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CAA 90 bp GGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGCCCGGGAGCCCCCGCTaGAGTCAAAGTAAACATCAC +
Preference number: 3 (lower is better)
Translates to: GCAGTWGPRAQLQPVGALPGSPR*SQSKHH
Trigger: GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGG...CAGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR-3UTR CAA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTCCCGGGAGCCCCCGCTaGAGTCAAAGTAAACATCAC +
Preference number: 3 (lower is better)
Translates to: WLRRDLGTQSTATASGSPPGSPR*SQSKHH
Trigger: GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGG...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR-3UTR CAA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCAACTGCTTTCCTTCTaGAACACTGACCCCGGGAGC +
Preference number: 3 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGAQLLSF*NTDPGS
Trigger: GCTCCCGGGGTCAGTGTTCAAGAAGGAAAGCAGTTG...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR-3UTR CAA 90 bp AGGGCACTCCACTTTCCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGACCAGGCGGCATCTTTaGGAACCTCGAGGAGGCGCC +
Preference number: 3 (lower is better)
Translates to: RALHFPFLRGLQGRWRALTRRHL*EPRGGA
Trigger: GGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGT...CAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGGAGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CAA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTCAACTGCTTTCCTTCTaGAACACTGACCCCGGGAGC +
Preference number: 3 (lower is better)
Translates to: WLRRDLGTQSTATASGSPQLLSF*NTDPGS
Trigger: GCTCCCGGGGTCAGTGTTCAAGAAGGAAAGCAGTTG...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR TCA 72 bp GGTGCTACCAGACAAGGGCACTCCACTTTCCATTCCTaGGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCC +
Preference number: 3 (lower is better)
Translates to: GATRQGHSTFHS*GDSRDAGELCA
Trigger: GGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGGAGTGCCCTTGTCTGGTAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CCA 72 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATaGTCTGGTGGGGCCCTGGTGGCTGCGCAGGGACCT +
Preference number: 3 (lower is better)
Translates to: PAEEGLSRIRNP*SGGALVAAQGP
Trigger: AGGTCCCTGCGCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR CCA 72 bp AGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTaGAGATGGGTTCCTGCAGCACAGCCGGCCTCCCGC +
Preference number: 3 (lower is better)
Translates to: SDCQLPLKSFGI*RWVPAAQPASR
Trigger: GCGGGAGGCCGGCTGTGCTGCAGGAACCCATCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CAA 90 bp TGGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCTAAGAGGCACTAATTaGGTGGAGCCGGTGAAATCC +
Preference number: 3 (lower is better)
Translates to: WWLRRDLGTQSTATASGSLRGTN*VEPVKS
Trigger: GGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAG...GCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR-3UTR CAA 90 bp CCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCGGTGAAAATTGGTTCCAGTaGAGTGCAGAGGCCAGTGCT +
Preference number: 3 (lower is better)
Translates to: PFLRGLQGRWRALCLPSGENWFQ*SAEASA
Trigger: AGCACTGGCCTCTGCACTCAACTGGAACCAATTTTC...ACCGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR GCA 72 bp TGTTCTGGAAGACTCCGTGGAGCGGGACGCAGGCACTaGTGTTTGGACGACACGCGGGATGGCTGCTTTCTG +
Preference number: 3 (lower is better)
Translates to: CSGRLRGAGRRH*CLDDTRDGCFL
Trigger: CAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCCGCTCCACGGAGTCTTCCAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CCA 72 bp GGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTaGCATCTGGAGATGGGTTCCTGCAGCACAGCCGGC +
Preference number: 3 (lower is better)
Translates to: GTQRLSAAPQVL*HLEMGSCSTAG
Trigger: GCCGGCTGTGCTGCAGGAACCCATCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR GCA 72 bp GAGCTGCGGATCTGCCGGGACACAGCGATTGTCAGCTaGCCCTCAAGTCCTTTGGCATCTGGAGATGGGTTC +
Preference number: 3 (lower is better)
Translates to: ELRICRDTAIVS*PSSPLASGDGF
Trigger: GAACCCATCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGATCCGCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR GCA 72 bp TTGAAGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTaGTCCGGGATTAGTTCAGAGGGAGGTGTTCTGGAA +
Preference number: 3 (lower is better)
Translates to: LKRSRWDSLGVG*SGISSEGGVLE
Trigger: TTCCAGAACACCTCCCTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCCACCTGGACCTCTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CCA 72 bp GGGACGCAGGCACTGCTGTTTGGACGACACGCGGGATaGCTGCTTTCTGAAGTTGTGGCTGTGACACTGACC +
Preference number: 3 (lower is better)
Translates to: GTQALLFGRHAG*LLSEVVAVTLT
Trigger: GGTCAGTGTCACAGCCACAACTTCAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CAA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAACCAGGCGGCATCTTTaGGAACCTCGAGGAGGCGCC +
Preference number: 3 (lower is better)
Translates to: LLCSWFGDRTPARSCPTATRRHL*EPRGGA
Trigger: GGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGT...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CAA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGCCCGGGAGCCCCCGCTaGAGTCAAAGTAAACATCAC +
Preference number: 3 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALPGSPR*SQSKHH
Trigger: GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGG...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR-3UTR CAA 90 bp AGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGCGCAGGCACTGCTGTTaGGACGACACGCGGGATGGC +
Preference number: 3 (lower is better)
Translates to: SGYVFPWRQTWCLKFRASRRHCC*DDTRDG
Trigger: GCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCG...CGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR GCA 72 bp AAATCGCGTCCTGGGCCGAGGCTCGTCTTTCTTCTCTaGAGTTGGTTTGGGGACAGAACTCCAGCACGCAGC +
Preference number: 3 (lower is better)
Translates to: KSRPGPRLVFLL*SWFGDRTPARS
Trigger: GCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGAAAGACGAGCCTCGGCCCAGGACGCGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CCA 72 bp TGGGCCGAGGCTCGTCTTTCTTCTCTGCAGTTGGTTTaGGGACAGAACTCCAGCACGCAGCTGTCCAACTGC +
Preference number: 3 (lower is better)
Translates to: WAEARLSSLQLV*GQNSSTQLSNC
Trigger: GCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGAAAGACGAGCCTCGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CAA 90 bp AGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTCAACTGCTTTCCTTCTaGAACACTGACCCCGGGAGC +
Preference number: 3 (lower is better)
Translates to: SRGGFVQNKEPMVWWGPGQLLSF*NTDPGS
Trigger: GCTCCCGGGGTCAGTGTTCAAGAAGGAAAGCAGTTG...ACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR-3UTR CAA 90 bp GAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACATCCACAGCCAGTGGCTaGATGGTGACGGTGAACTTG +
Preference number: 3 (lower is better)
Translates to: ELQHAAVQLQRLRVSMETSTASG*MVTVNL
Trigger: CAAGTTCACCGTCACCATCAAGCCACTGGCTGTGGA...TGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR TCA 72 bp AATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGTaGCCAGGCGGCATCTTTTGGAACCTCGAGGAGGCG +
Preference number: 3 (lower is better)
Translates to: NLVEPVKSRFPE*PGGIFWNLEEA
Trigger: CGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTCACCGGCTCCACCAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
3UTR-3UTR CAA 90 bp CTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGACTAAGAGGCACTAATTaGGTGGAGCCGGTGAAATCC +
Preference number: 3 (lower is better)
Translates to: LPGHSDCQLPLKSFGIWRLRGTN*VEPVKS
Trigger: GGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAG...TCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR TCA 72 bp ACTGCTGTTTGGACGACACGCGGGATGGCTGCTTTCTaGAGTTGTGGCTGTGACACTGACCCTGTTGGACAA +
Preference number: 3 (lower is better)
Translates to: TAVWTTRGMAAF*SCGCDTDPVGQ
Trigger: TTGTCCAACAGGGTCAGTGTCACAGCCACAACTTCAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CCA 72 bp ACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATaGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCG +
Preference number: 3 (lower is better)
Translates to: TQLSNCSGYVFP*RQTWCLKFRAS
Trigger: CGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CAA 90 bp AACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGATGGTGACGGTGAACTaGGACAGAGTCCCACATCCT +
Preference number: 3 (lower is better)
Translates to: NCSGYVFPWRQTWCLKFRMVTVN*DRVPHP
Trigger: AGGATGTGGGACTCTGTCCAAGTTCACCGTCACCAT...CCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CAA 90 bp TCTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCGTCCCGAATATTTGTTaGTCCCGAGAGAAGAGTTTT +
Preference number: 3 (lower is better)
Translates to: SSLQLVWGQNSSTQLSNCVPNIC*SREKSF
Trigger: AAAACTCTTCTCTCGGGACAAACAAATATTCGGGAC...GCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CCA 72 bp AACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTaGTGTCTCAAGTTCAGGGCTTCGAAAGTCCCGAAT +
Preference number: 3 (lower is better)
Translates to: NCSGYVFPWRQT*CLKFRASKVPN
Trigger: ATTCGGGACTTTCGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CAA 90 bp AGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGGTCCCGAATATTTGTTaGTCCCGAGAGAAGAGTTTT +
Preference number: 3 (lower is better)
Translates to: SGYVFPWRQTWCLKFRASVPNIC*SREKSF
Trigger: AAAACTCTTCTCTCGGGACAAACAAATATTCGGGAC...CGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR-3UTR CAA 90 bp CTAAGGTTTGGGCTATACGACCAGACAAACAGTGTGATTATTCCCAGCTTTTCGCTAAGAGGCACTAATTaGGTGGAGCCGGTGAAATCC +
Preference number: 3 (lower is better)
Translates to: LRFGLYDQTNSVIIPSFSLRGTN*VEPVKS
Trigger: GGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAG...CGAAAAGCTGGGAATAATCACACTGTTTGTCTGGTCGTATAGCCCAAACCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
3UTR CCA 72 bp AGAGAAAACTATTGCATTTCGTTAGAAATCGCGTCCTaGGCCGAGGCTCGTCTTTCTTCTCTGCAGTTGGTT +
Preference number: 3 (lower is better)
Translates to: RENYCISLEIAS*AEARLSSLQLV
Trigger: AACCAACTGCAGAGAAGAAAGACGAGCCTCGGCCCAGGACGCGATTTCTAACGAAATGCAATAGTTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGAAGGCCACAGGGCGCTaGGCCCAGCTGGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GCAGTWGPRAQLQPVGALKATGR*AQLGPS
Trigger: GGAGGGACCCAGCTGGGCGCAGCGCCCTGTGGCCTT...CAGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGTGCAGGCCGCTGTaGGAGCCGCTGTCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGALCRPL*EPLSPR
Trigger: CCTCGGGGACAGCGGCTCCCACAGCGGCCTGCACAG...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCGGCTACAGTCTCTATaGCGGCGGCGGTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGARLQSL*RRRWRR
Trigger: CCGCCGCCACCGCCGCCGCCATAGAGACTGTAGCCG...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592546.5
CDS-3UTR GCA 90 bp GCCTCGGGGCATCCGGCAGGGAGGTCTGGATCTAAAAGGCCACAGGGCGCTGCGGCGCAGGCCCAGCGATaGTCTGAGCTCCTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: ASGHPAGRSGSKRPQGAAAQAQR*SELLRA
Trigger: CGCCCGCAGGAGCTCAGAGCATCGCTGGGCCTGCGC...CGCAGCGCCCTGTGGCCTTTTAGATCCAGACCTCCCTGCCGGATGCCCCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp GTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCGATAGGCTCCCGCGCTaGAGACGATGGGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: VAAQGPGDPEHSYSQWEPDRLPR*RRWGSP
Trigger: GGGGGAGCCCCATCGTCTCCAGCGCGGGAGCCTATC...GGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GCCTCGGGGCATCCGGCAGGGAGGTCTGGATCTAAAAGGCCACAGGGCGCTGCGGGTCTGGTGGGGCCCTaGTGGCTGCGCAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: ASGHPAGRSGSKRPQGAAGLVGP*WLRRDL
Trigger: CAGGTCCCTGCGCAGCCACCAGGGCCCCACCAGACC...CGCAGCGCCCTGTGGCCTTTTAGATCCAGACCTCCCTGCCGGATGCCCCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGGGACTCCAGGGACGCTaGCGAGCTCTGTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GCAGTWGPRAQLQPVGALGLQGR*RALCLP
Trigger: GGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCC...CAGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp TGGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGCAGCAGGAAGCTaGCCAGGTCGGGCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: WWLRRDLGTQSTATASGSPAAGS*PGRALG
Trigger: TCCCAGCGCCCGACCTGGGCAGCTTCCTGCTGCAGG...GCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCGGTATCTGGGACGTGTTCTaGAGCACCGCCCGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PFLRGLQGRWRALCLPSGIWDVF*STARAA
Trigger: GGCGGCCCGGGCGGTGCTGCAGAACACGTCCCAGAT...ACCGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGCTGGGGCTGCCGGCATaGTGCTTCAGGACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GCAGTWGPRAQLQPVGALLGLPA*CFRTWV
Trigger: CACCCAGGTCCTGAAGCAGCATGCCGGCAGCCCCAG...CAGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGGGGCTGCCGGCATaGTGCTTCAGGACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGALGLPA*CFRTWV
Trigger: CACCCAGGTCCTGAAGCAGCATGCCGGCAGCCCCAG...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp GCACCCCTCACTCTGGCGCAGGCCCAGCGATGCTCTGAGCTCCTGCGGGCGGGGAGTGGTTGGGGTCACTaGGCTCCCGCTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: APLTLAQAQRCSELLRAGSGWGH*APALPG
Trigger: CCCTGGTAAAGCGGGAGCGCAGTGACCCCAACCACT...CCCCGCCCGCAGGAGCTCAGAGCATCGCTGGGCCTGCGCCAGAGTGAGGGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR GCA 90 bp GGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGGCCGGGGCTGCTAGATaGCCTGCAGGGAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GCAGTWGPRAQLQPVGALAGAAR*PAGSGW
Trigger: CCAACCACTCCCTGCAGGGCATCTAGCAGCCCCGGC...CAGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTATGCCCACCATGCTGTaGGAGGGGACCGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: WLRRDLGTQSTATASGSPMPTML*EGTAGG
Trigger: CCCGCCAGCGGTCCCCTCCCACAGCATGGTGGGCAT...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCCCTGCAGGGAGTGGTTaGGGTCACTGCGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: VAAQGPGDPEHSYSQWEPPAGSG*GHCAPA
Trigger: AGCGGGAGCGCAGTGACCCCAACCACTCCCTGCAGG...GGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGGAACCCATGGTCTGGTaGGGCCCTGGTGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: GCAGTWGPRAQLQPVGALEPMVW*GPGGCA
Trigger: TGCGCAGCCACCAGGGCCCCACCAGACCATGGGTTC...CAGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCGAACCCATGGTCTGGTaGGGCCCTGGTGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGAEPMVW*GPGGCA
Trigger: TGCGCAGCCACCAGGGCCCCACCAGACCATGGGTTC...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGTGCCTCCCCAGCGGTaGCAGGTAGGAGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: WLRRDLGTQSTATASGSPVPPQR*QVGGER
Trigger: CCTCTCCCCTCCTACCTGCCACCGCTGGGGAGGCAC...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCGCAGGATACACGTGCTaGACCGGCTGCACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VAAQGPGDPEHSYSQWEPAGYTC*TGCTCW
Trigger: CCAGCAGGTGCAGCCGGTGCAGCACGTGTATCCTGC...GGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCGGTTCGAGTTGCCCCTGGTaGCCAGCCGCCGCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PFLRGLQGRWRALCLPSGSSCPW*PAAAFS
Trigger: TGAGAACGCGGCGGCTGGGCACCAGGGGCAACTCGA...ACCGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCAGGGCCTTGACGTCGTaGAGTGTGACGCCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VAAQGPGDPEHSYSQWEPRALTS*SVTPSC
Trigger: GCAGGACGGCGTCACACTGCACGACGTCAAGGCCCT...GGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCGGTCTGGAGATGGGTTCCTaGAGCACAGCCGGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: PFLRGLQGRWRALCLPSGLEMGS*STAGLP
Trigger: CGGGAGGCCGGCTGTGCTGCAGGAACCCATCTCCAG...ACCGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTACTTCGAGTTGCCCCTaGTGCCCAGCCGCCGCGTTC +
Preference number: 4 (lower is better)
Translates to: WLRRDLGTQSTATASGSPTSSCP*CPAAAF
Trigger: GAACGCGGCGGCTGGGCACCAGGGGCAACTCGAAGT...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGGGCTTCTGGTGCATaGGCTGCTGCCGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: VAAQGPGDPEHSYSQWEPWASGA*AAAAWP
Trigger: TGGCCATGCGGCAGCAGCCCATGCACCAGAAGCCCA...GGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGCGGGGTCTTCGTCACTaGCAGGAAGAGAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GCAGTWGPRAQLQPVGALRGLRH*QEERWG
Trigger: GCCCCACCTCTCTTCCTGCCAGTGACGAAGACCCCG...CAGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCCAGGCGGCATCTTTTaGAACCTCGAGGAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGAPGGIF*NLEEAP
Trigger: CGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGG...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TGGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCGGCTGCGCAGGGACCTaGGGACCCAGAGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: WWLRRDLGTQSTATASGSGCAGT*GPRAQL
Trigger: TAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC...GCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTTCTGGGCGAAGGCACTaGCGACGCCCACCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: WLRRDLGTQSTATASGSPSGRRH*RRPPWS
Trigger: AGACCAAGGTGGGCGTCGTCAGTGCCTTCGCCCAGA...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp GGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTGGCTGCGAGCGTGGCGGGCGATaGGCGGGAGGTGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGFVQNKEPMVWWGPGGCERGGR*AGGVGQ
Trigger: CTGGCCCACACCTCCCGCTCATCGCCCGCCACGCTC...GCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592546.5
CDS-3UTR GCA 90 bp GTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCAATGGTACTTCGAGTTaGCCCTGGTGCCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: VAAQGPGDPEHSYSQWEPNGTSS*PWCPAA
Trigger: GGCGGCTGGGCACCAGGGGCAACTCGAAGTACCATT...GGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTAGTGTGACGCCGTCCTaGAGCAGGAAGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WLRRDLGTQSTATASGSPSVTPS*SRKLPR
Trigger: CCTGGGCAGCTTCCTGCTGCAGGACGGCGTCACACT...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp GCACCCCTCACTCTGGCGCAGGCCCAGCGATGCTCTGAGCTCCTGCGGGCGGGGACGCAGCTGTCCAACTaGAGCGGCTACGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: APLTLAQAQRCSELLRAGTQLSN*SGYVFP
Trigger: TGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGT...CCCCGCCCGCAGGAGCTCAGAGCATCGCTGGGCCTGCGCCAGAGTGAGGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCGCATCTGGGCCCCTTTaGGATTGGAGCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGAASGPL*DWSWLP
Trigger: AGGCAGCCAGCTCCAATCCCAAAGGGGCCCAGATGC...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTTGGGCTTCTGGTGCATaGGCTGCTGCCGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: WLRRDLGTQSTATASGSPWASGA*AAAAWP
Trigger: TGGCCATGCGGCAGCAGCCCATGCACCAGAAGCCCA...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GCCTCGGGGCATCCGGCAGGGAGGTCTGGATCTAAAAGGCCACAGGGCGCTGCGGTCCGTCTTCTGGGCTaGCCGGTACCTGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ASGHPAGRSGSKRPQGAAVRLLG*PVPGLL
Trigger: CAGAAGCCCAGGTACCGGCCAGCCCAGAAGACGGAC...CGCAGCGCCCTGTGGCCTTTTAGATCCAGACCTCCCTGCCGGATGCCCCGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp AGGGCACTCCACTTTCCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGCTGTGCAGGCCGCTGTaGGAGCCGCTGTCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: RALHFPFLRGLQGRWRALLCRPL*EPLSPR
Trigger: CCTCGGGGACAGCGGCTCCCACAGCGGCCTGCACAG...CAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGGAGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCGGCTCTGCACGGCCATaGTCTGTTCCGGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGAGSARP*SVPECC
Trigger: ACAGCACTCCGGAACAGACCATGGCCGTGCAGAGCC...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TGGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCGGGGTCTTCGTCACTaGCAGGAAGAGAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WWLRRDLGTQSTATASGSRGLRH*QEERWG
Trigger: GCCCCACCTCTCTTCCTGCCAGTGACGAAGACCCCG...GCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CCACTTTCCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCGGACTCCAGGGACGCTaGCGAGCTCTGTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PLSIPEGTPGTLASSVPPGLQGR*RALCLP
Trigger: GGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCC...GGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGCAGAGGGAGGTGTTCTaGAAGACTCCGTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: GCAGTWGPRAQLQPVGALQREVF*KTPWSG
Trigger: CCCGCTCCACGGAGTCTTCCAGAACACCTCCCTCTG...CAGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp AGCGGGACGCAGGCACTGCTGTTTGGACGACACGCGGGATGGCTGCTTTCTGAAGGCCCAGCGATGCTCTaGGCTCCTGCGGGCGGGGAA +
Preference number: 4 (lower is better)
Translates to: SGTQALLFGRHAGWLLSEGPAML*APAGGE
Trigger: TTCCCCGCCCGCAGGAGCTCAGAGCATCGCTGGGCC...TTCAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR GCA 90 bp CCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCGGTTACCTGGGCTTCTGGTaGATGGGCTGCTGCCGCATG +
Preference number: 4 (lower is better)
Translates to: PFLRGLQGRWRALCLPSGYLGFW*MGCCRM
Trigger: CATGCGGCAGCAGCCCATGCACCAGAAGCCCAGGTA...ACCGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGCCGGCTGTTCCGGAGTGCTGTaGAGGCCGCTGTGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: QVPRVTRRHLLEPRGGAGCSGVL*RPLWEP
Trigger: CGGCTCCCACAGCGGCCTGCACAGCACTCCGGAACA...GCCGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp GCCTCGGGGCATCCGGCAGGGAGGTCTGGATCTAAAAGGCCACAGGGCGCTGCGTGGTGGTGCTGGCTCTaGACGGCCATGGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ASGHPAGRSGSKRPQGAAWWCWL*TAMVCS
Trigger: GGAACAGACCATGGCCGTGCAGAGCCAGCACCACCA...CGCAGCGCCCTGTGGCCTTTTAGATCCAGACCTCCCTGCCGGATGCCCCGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCATGTACTGCTGGTGGTaGTGGCTCTGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: VAAQGPGDPEHSYSQWEPMYCWW*WLCTAM
Trigger: CATGGCCGTGCAGAGCCAGCACCACCAGCAGTACAT...GGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp AGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTGCTCCGGGATTAGTTCAGAGGCTGGGGCTGCCGGCATaGTGCTTCAGGACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RGPGGTRWGWGAPGLVQRLGLPA*CFRTWV
Trigger: CACCCAGGTCCTGAAGCAGCATGCCGGCAGCCCCAG...CCTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCCACCTGGACCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTGGCTGCCTGGGCCCGCCTCGCTaGCACGCTGCTCATCGCCCA +
Preference number: 4 (lower is better)
Translates to: GGFVQNKEPMVWWGPGGCLGPPR*HAAHRP
Trigger: TGGGCGATGAGCAGCGTGGCAGCGAGGCGGGCCCAG...GCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TGGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCAGTGGTTGGGGTCACTaGGCTCCCGCTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: WWLRRDLGTQSTATASGSSGWGH*APALPG
Trigger: CCCTGGTAAAGCGGGAGCGCAGTGACCCCAACCACT...GCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGGCGGCTGCTGCGTGTTaGTCCCCGTTGGTAAGTAAC +
Preference number: 4 (lower is better)
Translates to: GCAGTWGPRAQLQPVGALAAAAC*SPLVSN
Trigger: GTTACTTACCAACGGGGACCAACACGCAGCAGCCGC...CAGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000592546.5
CDS-3UTR CCA 90 bp GTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTCCACGTACTGCACCTaGGCAGGATACACGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VAAQGPGDPEHSYSQWEPSTYCT*AGYTCC
Trigger: GCAGCACGTGTATCCTGCCCAGGTGCAGTACGTGGA...GGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CCTCCCCAGCGGTGGCAGGTAGGAGGGGAGAGGCCGTCCCTTTCTAGTCGGGCTTGGGCTGCTGCCGCATaGCCATGTACTGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PPQRWQVGGERPSLSSRAWAAAA*PCTACP
Trigger: AGGACACGCAGTACATGGCCATGCGGCAGCAGCCCA...AGCCCGACTAGAAAGGGACGGCCTCTCCCCTCCTACCTGCCACCGCTGGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGCCGGCAGGCTGTCCGTCTTCTaGGCTGGCCGGTACCTGGGC +
Preference number: 4 (lower is better)
Translates to: QVPRVTRRHLLEPRGGAGRLSVF*AGRYLG
Trigger: GCCCAGGTACCGGCCAGCCCAGAAGACGGACAGCCT...GCCGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTGCTCCGGGATTAGTTCAGAGGAGGCTGTCCGTCTTCTaGGCTGGCCGGTACCTGGGC +
Preference number: 4 (lower is better)
Translates to: RGPGGTRWGWGAPGLVQRRLSVF*AGRYLG
Trigger: GCCCAGGTACCGGCCAGCCCAGAAGACGGACAGCCT...CCTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCCACCTGGACCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCGGTGGCTCTGCACGGCCATaGTCTGTTCCGGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PFLRGLQGRWRALCLPSGGSARP*SVPECC
Trigger: ACAGCACTCCGGAACAGACCATGGCCGTGCAGAGCC...ACCGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCTCTATGTACTGCTGGTaGTGCTGGCTCTGCACGGCC +
Preference number: 4 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGASMYCW*CWLCTA
Trigger: GGCCGTGCAGAGCCAGCACCACCAGCAGTACATAGA...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTGCTCCGGGATTAGTTCAGAGGAGCCAGCTGGCCCACTaGTCCAGGGAGCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGPGGTRWGWGAPGLVQRSQLAH*SRELCC
Trigger: GCAGCAGAGCTCCCTGGACCAGTGGGCCAGCTGGCT...CCTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCCACCTGGACCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGCCGGCGGCTGCGCAGGGACCTaGGGACCCAGAGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: QVPRVTRRHLLEPRGGAGGCAGT*GPRAQL
Trigger: TAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC...GCCGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CCTCCCCAGCGGTGGCAGGTAGGAGGGGAGAGGCCGTCCCTTTCTAGTCGGGCTGCAGGCACTGCTGTTTaGACGACACGCGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: PPQRWQVGGERPSLSSRAAGTAV*TTRGMA
Trigger: AGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGC...AGCCCGACTAGAAAGGGACGGCCTCTCCCCTCCTACCTGCCACCGCTGGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGAAGCGTGGCGGGCGATaGGCGGGAGGTGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALKRGGR*AGGVGQ
Trigger: CTGGCCCACACCTCCCGCTCATCGCCCGCCACGCTT...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp TGGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCAGCCGGTTCAGTGGTaGGTCCGGCTTCAGACGAAT +
Preference number: 4 (lower is better)
Translates to: WWLRRDLGTQSTATASGSQPVQW*VRLQTN
Trigger: ATTCGTCTGAAGCCGGACTCACCACTGAACCGGCTG...GCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp TGGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCTCCAGGTTCCCAGAGTaGCCAGGCGGCATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: WWLRRDLGTQSTATASGSSRFPE*PGGIFW
Trigger: CCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGA...GCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGCCGGCGCAGGATACACGTGCTaGACCGGCTGCACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QVPRVTRRHLLEPRGGAGAGYTC*TGCTCW
Trigger: CCAGCAGGTGCAGCCGGTGCAGCACGTGTATCCTGC...GCCGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp AGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTGCTCCGGGATTAGTTCAGAGGTGGGCAGGATACACGTaGTGCACCGGCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: RGPGGTRWGWGAPGLVQRWAGYT*CTGCTC
Trigger: GCAGGTGCAGCCGGTGCAGCACGTGTATCCTGCCCA...CCTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCCACCTGGACCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCGGTACTGGGTCTAGCTTGTaGTCCTGGCAGTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PFLRGLQGRWRALCLPSGTGSSL*SWQCRR
Trigger: CCTTCGGCACTGCCAGGAGCACAAGCTAGACCCAGT...ACCGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CCTCCCCAGCGGTGGCAGGTAGGAGGGGAGAGGCCGTCCCTTTCTAGTCGGGCTTTCTGGTGCATGGGCTaGTGCCGCATGGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: PPQRWQVGGERPSLSSRAFWCMG*CRMAMY
Trigger: GTACATGGCCATGCGGCAGCAGCCCATGCACCAGAA...AGCCCGACTAGAAAGGGACGGCCTCTCCCCTCCTACCTGCCACCGCTGGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGCCGGCTGGTCTGTTCCGGAGTaGTGTGCAGGCCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QVPRVTRRHLLEPRGGAGWSVPE*CAGRCG
Trigger: CCCACAGCGGCCTGCACAGCACTCCGGAACAGACCA...GCCGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGCCGGCAGTGTGACGCCGTCCTaGAGCAGGAAGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QVPRVTRRHLLEPRGGAGSVTPS*SRKLPR
Trigger: CCTGGGCAGCTTCCTGCTGCAGGACGGCGTCACACT...GCCGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGCTGGGCCCGCCTCGCTaGCACGCTGCTCATCGCCCA +
Preference number: 4 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLELGPPR*HAAHRP
Trigger: TGGGCGATGAGCAGCGTGGCAGCGAGGCGGGCCCAG...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGCGCTGGCGAGCTCTGTaGCTCCCCAGCGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALRWRAL*LPSGGR
Trigger: CCTGCCACCGCTGGGGAGGCACAGAGCTCGCCAGCG...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GCCTCGGGGCATCCGGCAGGGAGGTCTGGATCTAAAAGGCCACAGGGCGCTGCGCTTTGGGATTGGAGCTaGCTGCCTGGACCAACACCC +
Preference number: 4 (lower is better)
Translates to: ASGHPAGRSGSKRPQGAALWDWS*LPGPTP
Trigger: GGGTGTTGGTCCAGGCAGCCAGCTCCAATCCCAAAG...CGCAGCGCCCTGTGGCCTTTTAGATCCAGACCTCCCTGCCGGATGCCCCGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTCTTTGGGATTGGAGCTaGCTGCCTGGACCAACACCC +
Preference number: 4 (lower is better)
Translates to: WLRRDLGTQSTATASGSPLWDWS*LPGPTP
Trigger: GGGTGTTGGTCCAGGCAGCCAGCTCCAATCCCAAAG...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGCTGCCACGGTCACCTaGGCACCGCCTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QPFQLLKGLGPKSRVPAEAATVT*APPGAS
Trigger: CGAGGCCCCAGGCGGTGCCCAGGTGACCGTGGCAGC...CTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGGCTGCCACGGTCACCTaGGCACCGCCTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QLLKGLGPKSRVPAEEGLAATVT*APPGAS
Trigger: CGAGGCCCCAGGCGGTGCCCAGGTGACCGTGGCAGC...CAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GCCAGTGGGAGCCCTGGCCTGGGCTTCTGTAGCTTCAACAACTGCTTTCCTTCTGTGGGAGGGGACCGCTaGCGGGGACGAGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ASGSPGLGFCSFNNCFPSVGGDR*RGRGCH
Trigger: GTGGCAGCCTCGTCCCCGCCAGCGGTCCCCTCCCAC...AGAAGGAAAGCAGTTGTTGAAGCTACAGAAGCCCAGGCCAGGGCTCCCACTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AGCGGGACGCAGGCACTGCTGTTTGGACGACACGCGGGATGGCTGCTTTCTGAAATGCCCACCATGCTGTaGGAGGGGACCGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: SGTQALLFGRHAGWLLSEMPTML*EGTAGG
Trigger: CCCGCCAGCGGTCCCCTCCCACAGCATGGTGGGCAT...TTCAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp AGCGGGACGCAGGCACTGCTGTTTGGACGACACGCGGGATGGCTGCTTTCTGAAGATAGGCTCCCGCGCTaGAGACGATGGGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SGTQALLFGRHAGWLLSEDRLPR*RRWGSP
Trigger: GGGGGAGCCCCATCGTCTCCAGCGCGGGAGCCTATC...TTCAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGCCGGCTCGCCATTTCAAGCGTaGCGGGCGATGAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: QVPRVTRRHLLEPRGGAGSPFQA*RAMSGR
Trigger: CCTCCCGCTCATCGCCCGCCACGCTTGAAATGGCGA...GCCGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTTGCTGCTTCAGGACCTaGGTGACCACACTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: WLRRDLGTQSTATASGSPCCFRT*VTTLSS
Trigger: GCTGGACAGTGTGGTCACCCAGGTCCTGAAGCAGCA...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp AGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTGCTCCGGGATTAGTTCAGAGGAGCTCCTCATCCACCTaGGGATGGGGTCGCACTGAC +
Preference number: 4 (lower is better)
Translates to: RGPGGTRWGWGAPGLVQRSSSST*GWGRTD
Trigger: GTCAGTGCGACCCCATCCTCAGGTGGATGAGGAGCT...CCTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCCACCTGGACCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp GGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGATTTGGTGGAGCCGGTaGAATCCAGGTTCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: GCAGTWGPRAQLQPVGALIWWSR*NPGSQS
Trigger: ACTCTGGGAACCTGGATTTCACCGGCTCCACCAAAT...CAGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TCTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCTGGCACAGGCGGGGCTaGCGCCGAGGGACGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SSLQLVWGQNSSTQLSNCWHRRG*RRGTQS
Trigger: GCTCTGCGTCCCTCGGCGGCAGCCCCGCCTGTGCCA...GCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GCCGGTGAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGATGGCGGGGACGAGGCTaGCACGGTCACCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: AGEIQVPRVTRRHLLEPRWRGRG*HGHLGT
Trigger: GGTGCCCAGGTGACCGTGGCAGCCTCGTCCCCGCCA...TCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTCACCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp AGGGCACTCCACTTTCCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGAGTGTGACGCCGTCCTaGAGCAGGAAGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RALHFPFLRGLQGRWRALSVTPS*SRKLPR
Trigger: CCTGGGCAGCTTCCTGCTGCAGGACGGCGTCACACT...CAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGGAGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CTCAGCACAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCCGCTGGCGAGCTCTGTaGCTCCCCAGCGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSTALSALKGTGAKVQGSRWRAL*LPSGGR
Trigger: CCTGCCACCGCTGGGGAGGCACAGAGCTCGCCAGCG...GGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTGTGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GCCAGTGGGAGCCCTGGCCTGGGCTTCTGTAGCTTCAACAACTGCTTTCCTTCTAAGGCCACAGGGCGCTaGGCCCAGCTGGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ASGSPGLGFCSFNNCFPSKATGR*AQLGPS
Trigger: GGAGGGACCCAGCTGGGCGCAGCGCCCTGTGGCCTT...AGAAGGAAAGCAGTTGTTGAAGCTACAGAAGCCCAGGCCAGGGCTCCCACTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGCCGGCTCGCTGGGGGTGGGGTaGTCCGGGATTAGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: QVPRVTRRHLLEPRGGAGSLGVG*SGISSE
Trigger: CTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGA...GCCGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGGCTGCCACGGTCACCTaGGCACCGCCTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: HAAVQLQRLRVSMETNLVAATVT*APPGAS
Trigger: CGAGGCCCCAGGCGGTGCCCAGGTGACCGTGGCAGC...CACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCCTGTGCAGGCCGCTGTaGGAGCCGCTGTCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGLCRPL*EPLSPR
Trigger: CCTCGGGGACAGCGGCTCCCACAGCGGCCTGCACAG...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTGCTCCGGGATTAGTTCAGAGGTACTGCTGGTGGTGCTaGCTCTGCACGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: RGPGGTRWGWGAPGLVQRYCWWC*LCTAMV
Trigger: GACCATGGCCGTGCAGAGCCAGCACCACCAGCAGTA...CCTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCCACCTGGACCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GCCAGTGGGAGCCCTGGCCTGGGCTTCTGTAGCTTCAACAACTGCTTTCCTTCTTCGGCGTCTCTCCGGTaGCCTCCGCGACGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: ASGSPGLGFCSFNNCFPSSASLR*PPRRGA
Trigger: AGCACCGCGTCGCGGAGGCCACCGGAGAGACGCCGA...AGAAGGAAAGCAGTTGTTGAAGCTACAGAAGCCCAGGCCAGGGCTCCCACTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AGCGGGACGCAGGCACTGCTGTTTGGACGACACGCGGGATGGCTGCTTTCTGAACCTGCAGGGAGTGGTTaGGGTCACTGCGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SGTQALLFGRHAGWLLSEPAGSG*GHCAPA
Trigger: AGCGGGAGCGCAGTGACCCCAACCACTCCCTGCAGG...TTCAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTGGCTGCTGGGCAGGATACACGTaGTGCACCGGCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: GGFVQNKEPMVWWGPGGCWAGYT*CTGCTC
Trigger: GCAGGTGCAGCCGGTGCAGCACGTGTATCCTGCCCA...GCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATATGGCGGGGACGAGGCTaGCACGGTCACCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRIWRGRG*HGHLGT
Trigger: GGTGCCCAGGTGACCGTGGCAGCCTCGTCCCCGCCA...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp AGGGCACTCCACTTTCCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGCGTCTGTACACCAGCTaGAGGGCCTTGACGTCGTGC +
Preference number: 4 (lower is better)
Translates to: RALHFPFLRGLQGRWRALRLYTS*RALTSC
Trigger: GCACGACGTCAAGGCCCTGCAGCTGGTGTACAGACG...CAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGGAGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTGGCTGCTGGGGAAGCTGGGGCTaGCGGCATGCTGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GGFVQNKEPMVWWGPGGCWGSWG*RHAASG
Trigger: TCCTGAAGCAGCATGCCGGCAGCCCCAGCTTCCCCA...GCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGCTGGAGATGGGTTCCTaGAGCACAGCCGGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLELEMGS*STAGLP
Trigger: CGGGAGGCCGGCTGTGCTGCAGGAACCCATCTCCAG...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCGGTACAGCGATTGTCAGCTaGCCCTCAAGTCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: PFLRGLQGRWRALCLPSGTAIVS*PSSPLA
Trigger: TGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGT...ACCGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp AGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTGCTCCGGGATTAGTTCAGAGGGATGCTCTGAGCTCCTaGGGGCGGGGAAGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: RGPGGTRWGWGAPGLVQRDALSS*GRGSRF
Trigger: AAACCTACTTCCCCGCCCGCAGGAGCTCAGAGCATC...CCTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCCACCTGGACCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp GGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTGGCTGCCACCTGGGCACCGCCTaGGGCCTCGAAGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GGFVQNKEPMVWWGPGGCHLGTA*GLEVRS
Trigger: GCTTCTTACTTCGAGGCCCCAGGCGGTGCCCAGGTG...GCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCATGCCCACCATGCTGTaGGAGGGGACCGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSMPTML*EGTAGG
Trigger: CCCGCCAGCGGTCCCCTCCCACAGCATGGTGGGCAT...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTGCTCCGGGATTAGTTCAGAGGTCTATGTACTGCTGGTaGTGCTGGCTCTGCACGGCC +
Preference number: 4 (lower is better)
Translates to: RGPGGTRWGWGAPGLVQRSMYCW*CWLCTA
Trigger: GGCCGTGCAGAGCCAGCACCACCAGCAGTACATAGA...CCTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCCACCTGGACCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCAACTCGGGGAAGACGTaGGAGACATCTATGTACTGC +
Preference number: 4 (lower is better)
Translates to: VAAQGPGDPEHSYSQWEPNSGKT*ETSMYC
Trigger: GCAGTACATAGATGTCTCCCACGTCTTCCCCGAGTT...GGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGCCCAGGTCGGGCGCTaGGAACTCGGGGAAGACGTG +
Preference number: 4 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGAQVGR*ELGEDV
Trigger: CACGTCTTCCCCGAGTTCCCAGCGCCCGACCTGGGC...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTAGGTCGCTGAGCATCTaGTTGATCTGGGACGTGTTC +
Preference number: 4 (lower is better)
Translates to: WLRRDLGTQSTATASGSPRSLSI*LIWDVF
Trigger: GAACACGTCCCAGATCAACCAGATGCTCAGCGACCT...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGAGCCAGCTGGCCCACTaGTCCAGGGAGCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALSQLAH*SRELCC
Trigger: GCAGCAGAGCTCCCTGGACCAGTGGGCCAGCTGGCT...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCATCGGCGTCTCTCCGGTaGCCTCCGCGACGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLCSWFGDRTPARSCPTASASLR*PPRRGA
Trigger: AGCACCGCGTCGCGGAGGCCACCGGAGAGACGCCGA...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTGGCTGCATGCCCTGCAGGGAGTaGTTGGGGTCACTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GGFVQNKEPMVWWGPGGCMPCRE*LGSLRS
Trigger: GGAGCGCAGTGACCCCAACCACTCCCTGCAGGGCAT...GCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GCCAGTGGGAGCCCTGGCCTGGGCTTCTGTAGCTTCAACAACTGCTTTCCTTCTGTGCCTCCCCAGCGGTaGCAGGTAGGAGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ASGSPGLGFCSFNNCFPSVPPQR*QVGGER
Trigger: CCTCTCCCCTCCTACCTGCCACCGCTGGGGAGGCAC...AGAAGGAAAGCAGTTGTTGAAGCTACAGAAGCCCAGGCCAGGGCTCCCACTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp CCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCGGTAAAATTGGTTCCAGTTaGGTGCAGAGGCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: PFLRGLQGRWRALCLPSGKIGSS*VQRPVL
Trigger: GAGCACTGGCCTCTGCACTCAACTGGAACCAATTTT...ACCGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGGGAGGGAGATCGGCTaGATCTGGGCCCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALGREIG*IWAPLG
Trigger: TCCCAAAGGGGCCCAGATGCAGCCGATCTCCCTCCC...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGGCAGGATACACGTGCTaGACCGGCTGCACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLEAGYTC*TGCTCW
Trigger: CCAGCAGGTGCAGCCGGTGCAGCACGTGTATCCTGC...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCTCGAGTTGCCCCTGGTaGCCAGCCGCCGCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSSSCPW*PAAAFS
Trigger: TGAGAACGCGGCGGCTGGGCACCAGGGGCAACTCGA...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp GCCAGTGGGAGCCCTGGCCTGGGCTTCTGTAGCTTCAACAACTGCTTTCCTTCTTGTTCCGGAGTGCTGTaGAGGCCGCTGTGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: ASGSPGLGFCSFNNCFPSCSGVL*RPLWEP
Trigger: CGGCTCCCACAGCGGCCTGCACAGCACTCCGGAACA...AGAAGGAAAGCAGTTGTTGAAGCTACAGAAGCCCAGGCCAGGGCTCCCACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp AGCGGGACGCAGGCACTGCTGTTTGGACGACACGCGGGATGGCTGCTTTCTGAAGCCTCGCTGCCACGCTaGTCATCGCCCATGTCATCT +
Preference number: 4 (lower is better)
Translates to: SGTQALLFGRHAGWLLSEASLPR*SSPMSS
Trigger: AGATGACATGGGCGATGAGCAGCGTGGCAGCGAGGC...TTCAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCGCCGGGGCTGCTAGATaGCCTGCAGGGAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSAGAAR*PAGSGW
Trigger: CCAACCACTCCCTGCAGGGCATCTAGCAGCCCCGGC...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp GCCGGTGAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGCGGGACGCAGGCACTaGTGTTTGGACGACACGCGG +
Preference number: 4 (lower is better)
Translates to: AGEIQVPRVTRRHLLEPRAGRRH*CLDDTR
Trigger: CCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCCGC...TCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTCACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp AGCGGGACGCAGGCACTGCTGTTTGGACGACACGCGGGATGGCTGCTTTCTGAACTGCATGCTCAGGTCTaGAGTTCGGGCCGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SGTQALLFGRHAGWLLSELHAQV*SSGREF
Trigger: GAACTCCCGGCCCGAACTCCAGACCTGAGCATGCAG...TTCAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp AGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGGTGGGAGGGGACCGCTaGCGGGGACGAGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SGYVFPWRQTWCLKFRASVGGDR*RGRGCH
Trigger: GTGGCAGCCTCGTCCCCGCCAGCGGTCCCCTCCCAC...CGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CTTTCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATGTGGGAGGGGACCGCTaGCGGGGACGAGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LSFLNTDPGSPRLSQSKHVGGDR*RGRGCH
Trigger: GTGGCAGCCTCGTCCCCGCCAGCGGTCCCCTCCCAC...ATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAGATAGGCTCCCGCGCTaGAGACGATGGGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LKGLGPKSRVPAEEGLSRDRLPR*RRWGSP
Trigger: GGGGGAGCCCCATCGTCTCCAGCGCGGGAGCCTATC...TCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTACTTCGAGTTGCCCCTaGTGCCCAGCCGCCGCGTTC +
Preference number: 4 (lower is better)
Translates to: SRGGFVQNKEPMVWWGPGTSSCP*CPAAAF
Trigger: GAACGCGGCGGCTGGGCACCAGGGGCAACTCGAAGT...ACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCACTTCGAGTTGCCCCTaGTGCCCAGCCGCCGCGTTC +
Preference number: 4 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGTSSCP*CPAAAF
Trigger: GAACGCGGCGGCTGGGCACCAGGGGCAACTCGAAGT...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GCCAGTGGGAGCCCTGGCCTGGGCTTCTGTAGCTTCAACAACTGCTTTCCTTCTCGGTACCTGGGCTTCTaGTGCATGGGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ASGSPGLGFCSFNNCFPSRYLGF*CMGCCR
Trigger: GCGGCAGCAGCCCATGCACCAGAAGCCCAGGTACCG...AGAAGGAAAGCAGTTGTTGAAGCTACAGAAGCCCAGGCCAGGGCTCCCACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCCGGTACCTGGGCTTCTaGTGCATGGGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSRYLGF*CMGCCR
Trigger: GCGGCAGCAGCCCATGCACCAGAAGCCCAGGTACCG...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCGGGCTGGCCGGTACCTaGGCTTCTGGTGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSGLAGT*ASGAWA
Trigger: AGCCCATGCACCAGAAGCCCAGGTACCGGCCAGCCC...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAGCCCAGGTCGGGCGCTaGGAACTCGGGGAAGACGTG +
Preference number: 4 (lower is better)
Translates to: LKGLGPKSRVPAEEGLSRAQVGR*ELGEDV
Trigger: CACGTCTTCCCCGAGTTCCCAGCGCCCGACCTGGGC...TCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTTGGCAGGAAGAGAGGTaGGGCCGTCGCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SRGGFVQNKEPMVWWGPGWQEER*GRRWRR
Trigger: CCTCCTCCAGCGACGGCCCCACCTCTCTTCCTGCCA...ACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GCCAGTGGGAGCCCTGGCCTGGGCTTCTGTAGCTTCAACAACTGCTTTCCTTCTTGGCAGGAAGAGAGGTaGGGCCGTCGCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ASGSPGLGFCSFNNCFPSWQEER*GRRWRR
Trigger: CCTCCTCCAGCGACGGCCCCACCTCTCTTCCTGCCA...AGAAGGAAAGCAGTTGTTGAAGCTACAGAAGCCCAGGCCAGGGCTCCCACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TGGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCTGGCAAAGTTACGGATaGCCTGTGTCAAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: WWLRRDLGTQSTATASGSWQSYG*PVSRYW
Trigger: CCAGTACCTTGACACAGGCCATCCGTAACTTTGCCA...GCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTAGCCTTCCAAGCTCTTaGCAAAGTTACGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: WLRRDLGTQSTATASGSPSLPSS*QSYGWP
Trigger: AGGCCATCCGTAACTTTGCCAAGAGCTTGGAAGGCT...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGGTCCCGGATCACCATaGAGCTGTAAAAGGACCATT +
Preference number: 4 (lower is better)
Translates to: WLRRDLGTQSTATASGSPGPGSP*SCKRTI
Trigger: AATGGTCCTTTTACAGCTCCATGGTGATCCGGGACC...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGACCAGGCGGCATCTTTTaGAACCTCGAGGAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: LPGHSDCQLPLKSFGIWRPGGIF*NLEEAP
Trigger: CGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGG...TCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACGGTCTGGTGGGGCCCTaGTGGCTGCGCAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHGLVGP*WLRRDL
Trigger: CAGGTCCCTGCGCAGCCACCAGGGCCCCACCAGACC...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTGAACCCATGGTCTGGTaGGGCCCTGGTGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: SRGGFVQNKEPMVWWGPGEPMVW*GPGGCA
Trigger: TGCGCAGCCACCAGGGCCCCACCAGACCATGGGTTC...ACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CCACTTTCCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCGCCCCTCAAGTCCTTTaGCATCTGGAGATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PLSIPEGTPGTLASSVPPAPQVL*HLEMGS
Trigger: GGAACCCATCTCCAGATGCCAAAGGACTTGAGGGGC...GGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGGGCTACGTGTTTCCATaGAGACAAACTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GCAGTWGPRAQLQPVGALGYVFP*RQTWCL
Trigger: GAGACACCAAGTTTGTCTCCATGGAAACACGTAGCC...CAGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CAA 72 bp GGAAGACTCCGTGGAGCGGGACGCAGGCACTGCTGTTaGGACGACACGCGGGATGGCTGCTTTCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GRLRGAGRRHCC*DDTRDGCFLKL
Trigger: CAACTTCAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCCGCTCCACGGAGTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CAA 72 bp GCGTCCTGGGCCGAGGCTCGTCTTTCTTCTCTGCAGTaGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ASWAEARLSSLQ*VWGQNSSTQLS
Trigger: GGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGAAAGACGAGCCTCGGCCCAGGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp CAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGCCCCGACATCCATGGTaGTGCCCACCATGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QPFQLLKGLGPKSRVPAEPRHPW*CPPCCG
Trigger: CCCACAGCATGGTGGGCATCACCATGGATGTCGGGG...CTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGAGCTCCTCATCCACCTaGGGATGGGGTCGCACTGAC +
Preference number: 4 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLESSSST*GWGRTD
Trigger: GTCAGTGCGACCCCATCCTCAGGTGGATGAGGAGCT...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCTCTGGGCGAAGGCACTaGCGACGCCCACCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGSGRRH*RRPPWS
Trigger: AGACCAAGGTGGGCGTCGTCAGTGCCTTCGCCCAGA...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGGGAGGGAGATCGGCTaGATCTGGGCCCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGGREIG*IWAPLG
Trigger: TCCCAAAGGGGCCCAGATGCAGCCGATCTCCCTCCC...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp AGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTGGGAGGGAGATCGGCTaGATCTGGGCCCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SRGGFVQNKEPMVWWGPGGREIG*IWAPLG
Trigger: TCCCAAAGGGGCCCAGATGCAGCCGATCTCCCTCCC...ACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CTTTCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATTGGCGGGGACGAGGCTaGCACGGTCACCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: LSFLNTDPGSPRLSQSKHWRGRG*HGHLGT
Trigger: GGTGCCCAGGTGACCGTGGCAGCCTCGTCCCCGCCA...ATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATATCGAGTTGCCCCTGGTaGCCAGCCGCCGCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRISSCPW*PAAAFS
Trigger: TGAGAACGCGGCGGCTGGGCACCAGGGGCAACTCGA...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTTGGTGGTGCTGGCTCTaGACGGCCATGGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CSWFGDRTPARSCPTAAAWWCWL*TAMVCS
Trigger: GGAACAGACCATGGCCGTGCAGAGCCAGCACCACCA...AGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTGGCTGCATGTACTGCTGGTGGTaGTGGCTCTGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: GGFVQNKEPMVWWGPGGCMYCWW*WLCTAM
Trigger: CATGGCCGTGCAGAGCCAGCACCACCAGCAGTACAT...GCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CAGCTGGGTCCCTCCCACATGGTGCTACCAGACAAGGGCACTCCACTTTCCATTAGGGCCTTGACGTCGTaGAGTGTGACGCCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QLGPSHMVLPDKGTPLSIRALTS*SVTPSC
Trigger: GCAGGACGGCGTCACACTGCACGACGTCAAGGCCCT...AATGGAAAGTGGAGTGCCCTTGTCTGGTAGCACCATGTGGGAGGGACCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGATCTGGGACGTGTTCTaGAGCACCGCCCGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMIWDVF*STARAA
Trigger: GGCGGCCCGGGCGGTGCTGCAGAACACGTCCCAGAT...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CTCAGCACAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCTGGGGAAGCTGGGGCTaGCGGCATGCTGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LSTALSALKGTGAKVQGSWGSWG*RHAASG
Trigger: TCCTGAAGCAGCATGCCGGCAGCCCCAGCTTCCCCA...GGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTGTGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCTGGGGAAGCTGGGGCTaGCGGCATGCTGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSWGSWG*RHAASG
Trigger: TCCTGAAGCAGCATGCCGGCAGCCCCAGCTTCCCCA...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGATCGCTGGGGGTGGGGTaGTCCGGGATTAGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LPGHSDCQLPLKSFGIWRSLGVG*SGISSE
Trigger: CTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGA...TCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp TGGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCTCGTCTTTCTTCTCTaGAGTTGGTTTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: WWLRRDLGTQSTATASGSLVFLL*SWFGDR
Trigger: TCTGTCCCCAAACCAACTGCAGAGAAGAAAGACGAG...GCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GCCAGTGGGAGCCCTGGCCTGGGCTTCTGTAGCTTCAACAACTGCTTTCCTTCTGGGCCCCTTTGGGATTaGAGCTGGCTGCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: ASGSPGLGFCSFNNCFPSGPLWD*SWLPGP
Trigger: TGGTCCAGGCAGCCAGCTCCAATCCCAAAGGGGCCC...AGAAGGAAAGCAGTTGTTGAAGCTACAGAAGCCCAGGCCAGGGCTCCCACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCGGGCCCCTTTGGGATTaGAGCTGGCTGCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSGPLWD*SWLPGP
Trigger: TGGTCCAGGCAGCCAGCTCCAATCCCAAAGGGGCCC...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGGCATCTGGGCCCCTTTaGGATTGGAGCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLEASGPL*DWSWLP
Trigger: AGGCAGCCAGCTCCAATCCCAAAGGGGCCCAGATGC...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACACACCTGGGCACCGCCTaGGGCCTCGAAGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ELQHAAVQLQRLRVSMETHLGTA*GLEVRS
Trigger: GCTTCTTACTTCGAGGCCCCAGGCGGTGCCCAGGTG...TGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGATGAGCGGGAGGTGTaGGCCAGGGAGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGDEREV*ARECLV
Trigger: CACCAGACACTCCCTGGCCCACACCTCCCGCTCATC...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTGGGCTTCTGGTGCATaGGCTGCTGCCGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: QLLKGLGPKSRVPAEEGLWASGA*AAAAWP
Trigger: TGGCCATGCGGCAGCAGCCCATGCACCAGAAGCCCA...CAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGGGCTGGCCGGTACCTaGGCTTCTGGTGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: LLCSWFGDRTPARSCPTAGLAGT*ASGAWA
Trigger: AGCCCATGCACCAGAAGCCCAGGTACCGGCCAGCCC...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp AGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTGTCCGTCTTCTGGGCTaGCCGGTACCTGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SRGGFVQNKEPMVWWGPGVRLLG*PVPGLL
Trigger: CAGAAGCCCAGGTACCGGCCAGCCCAGAAGACGGAC...ACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGGGCTCTGCACGGCCATaGTCTGTTCCGGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LCSWFGDRTPARSCPTAAGSARP*SVPECC
Trigger: ACAGCACTCCGGAACAGACCATGGCCGTGCAGAGCC...CGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACTGGCAGGAAGAGAGGTaGGGCCGTCGCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGPKSRVPAEEGLSRIRNWQEER*GRRWRR
Trigger: CCTCCTCCAGCGACGGCCCCACCTCTCTTCCTGCCA...GTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCGGTCTGGATGACCTGTTGTaGGAAGTCACTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: PFLRGLQGRWRALCLPSGLDDLL*EVTHGI
Trigger: AATGCCATGAGTGACTTCCCACAACAGGTCATCCAG...ACCGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACCGGCCTTGGGGAAGCTaGGGCTGCCGGCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHRPWGS*GCRHAA
Trigger: AGCAGCATGCCGGCAGCCCCAGCTTCCCCAAGGCCG...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGATGCCCTGCAGGGAGTaGTTGGGGTCACTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: QPFQLLKGLGPKSRVPAEMPCRE*LGSLRS
Trigger: GGAGCGCAGTGACCCCAACCACTCCCTGCAGGGCAT...CTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCATGCCCTGCAGGGAGTaGTTGGGGTCACTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGMPCRE*LGSLRS
Trigger: GGAGCGCAGTGACCCCAACCACTCCCTGCAGGGCAT...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCGGTCTGGTGGGGCCCTaGTGGCTGCGCAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHIGLVGP*WLRRDL
Trigger: CAGGTCCCTGCGCAGCCACCAGGGCCCCACCAGACC...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GCCAGTGGGAGCCCTGGCCTGGGCTTCTGTAGCTTCAACAACTGCTTTCCTTCTAAGGAACCCATGGTCTaGTGGGGCCCTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ASGSPGLGFCSFNNCFPSKEPMV*WGPGGC
Trigger: GCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTT...AGAAGGAAAGCAGTTGTTGAAGCTACAGAAGCCCAGGCCAGGGCTCCCACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGTTCTGGAAGACTCCGTaGAGCGGGACGCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALFWKTP*SGTQAL
Trigger: CAGTGCCTGCGTCCCGCTCCACGGAGTCTTCCAGAA...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGGGGACTCGCTGGGGGTaGGGTGCTCCGGGATTAGTT +
Preference number: 4 (lower is better)
Translates to: QLLKGLGPKSRVPAEEGLGTRWG*GAPGLV
Trigger: AACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCC...CAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCTTGAAGAGGTCCAGGTaGGACTCGCTGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSLKRSR*DSLGVG
Trigger: CCCCACCCCCAGCGAGTCCCACCTGGACCTCTTCAA...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCGGTGGCTACGTGTTTCCATaGAGACAAACTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PFLRGLQGRWRALCLPSGGYVFP*RQTWCL
Trigger: GAGACACCAAGTTTGTCTCCATGGAAACACGTAGCC...ACCGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TCTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCCTGCACCCCTCACTCTaGCGCAGGCCCAGCGATGCT +
Preference number: 4 (lower is better)
Translates to: SSLQLVWGQNSSTQLSNCLHPSL*RRPSDA
Trigger: AGCATCGCTGGGCCTGCGCCAGAGTGAGGGGTGCAG...GCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACACAGCCACTGGAGCGTaGCGGGCGATGAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHTATGA*RAMSGR
Trigger: CCTCCCGCTCATCGCCCGCCACGCTCCAGTGGCTGT...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592546.5
CDS-3UTR TCA 90 bp CAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGAGCTCCTCATCCACCTaGGGATGGGGTCGCACTGAC +
Preference number: 4 (lower is better)
Translates to: QLLKGLGPKSRVPAEEGLSSSST*GWGRTD
Trigger: GTCAGTGCGACCCCATCCTCAGGTGGATGAGGAGCT...CAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp TTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGATCTGGGCGAAGGCACTaGCGACGCCCACCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LKGLGPKSRVPAEEGLSRSGRRH*RRPPWS
Trigger: AGACCAAGGTGGGCGTCGTCAGTGCCTTCGCCCAGA...TCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCTTCCTTCTTGAACACTaGCCCCGGGAGCCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGFLLEH*PREPPL
Trigger: AAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGAA...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp GGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTGGCTGCCGAAGTAAGAAGCCGTaGTGCTGGGGGCGTACATCT +
Preference number: 4 (lower is better)
Translates to: GGFVQNKEPMVWWGPGGCRSKKP*CWGRTS
Trigger: AGATGTACGCCCCCAGCAGCACGGCTTCTTACTTCG...GCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGATACTGCGTGTCCTCCTaGAGCCGGTTCAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LPGHSDCQLPLKSFGIWRYCVSS*SRFSGE
Trigger: CTCACCACTGAACCGGCTGCAGGAGGACACGCAGTA...TCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCGCATGGCCATGTACTaGGTGTCCTCCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LGPKSRVPAEEGLSRIRNRMAMY*VSSCSR
Trigger: CCGGCTGCAGGAGGACACGCAGTACATGGCCATGCG...GTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CAGCTGGGTCCCTCCCACATGGTGCTACCAGACAAGGGCACTCCACTTTCCATTTGGTGCATGGGCTGCTaGCGCATGGCCATGTACTGC +
Preference number: 4 (lower is better)
Translates to: QLGPSHMVLPDKGTPLSIWCMGC*RMAMYC
Trigger: GCAGTACATGGCCATGCGGCAGCAGCCCATGCACCA...AATGGAAAGTGGAGTGCCCTTGTCTGGTAGCACCATGTGGGAGGGACCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCATGGTCTGTTCCGGAGTaGTGTGCAGGCCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLCSWFGDRTPARSCPTAWSVPE*CAGRCG
Trigger: CCCACAGCGGCCTGCACAGCACTCCGGAACAGACCA...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCCCTGCAGCAGGAAGCTaGCCAGGTCGGGCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHIPAAGS*PGRALG
Trigger: TCCCAGCGCCCGACCTGGGCAGCTTCCTGCTGCAGG...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp AGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTCGTCTGTACACCAGCTaGAGGGCCTTGACGTCGTGC +
Preference number: 4 (lower is better)
Translates to: SRGGFVQNKEPMVWWGPGRLYTS*RALTSC
Trigger: GCACGACGTCAAGGCCCTGCAGCTGGTGTACAGACG...ACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACGCCGGGGCTGCTAGATaGCCTGCAGGGAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHAGAAR*PAGSGW
Trigger: CCAACCACTCCCTGCAGGGCATCTAGCAGCCCCGGC...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGGTCCCTCCCACATGGTaGTACCAGACAAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLEVPPTW*YQTRAL
Trigger: GAGTGCCCTTGTCTGGTAGCACCATGTGGGAGGGAC...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGATTCGAGCTGCGGATCTaGCGGGACACAGCGATTGTC +
Preference number: 4 (lower is better)
Translates to: LPGHSDCQLPLKSFGIWRFELRI*RDTAIV
Trigger: GACAATCGCTGTGTCCCGGCAGATCCGCAGCTCGAA...TCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGAGCGTCTTTGTCTTCCTaGACCCCTCACTCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: LPGHSDCQLPLKSFGIWRASLSS*TPHSGA
Trigger: TGCGCCAGAGTGAGGGGTGCAGGAAGACAAAGACGC...TCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGCTTTGGGATTGGAGCTaGCTGCCTGGACCAACACCC +
Preference number: 4 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLELWDWS*LPGPTP
Trigger: GGGTGTTGGTCCAGGCAGCCAGCTCCAATCCCAAAG...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACGGGCCCCTTTGGGATTaGAGCTGGCTGCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: LGPKSRVPAEEGLSRIRNGPLWD*SWLPGP
Trigger: TGGTCCAGGCAGCCAGCTCCAATCCCAAAGGGGCCC...GTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGAGATCGGCTGCATCTaGGCCCCTTTGGGATTGGAG +
Preference number: 4 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALEIGCI*APLGLE
Trigger: CTCCAATCCCAAAGGGGCCCAGATGCAGCCGATCTC...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TCTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCCACCTGGGCACCGCCTaGGGCCTCGAAGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSLQLVWGQNSSTQLSNCHLGTA*GLEVRS
Trigger: GCTTCTTACTTCGAGGCCCCAGGCGGTGCCCAGGTG...GCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGATCGCCATTTCAAGCGTaGCGGGCGATGAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LKGLGPKSRVPAEEGLSRSPFQA*RAMSGR
Trigger: CCTCCCGCTCATCGCCCGCCACGCTTGAAATGGCGA...TCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACGGGCTGGCCGGTACCTaGGCTTCTGGTGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHGLAGT*ASGAWA
Trigger: AGCCCATGCACCAGAAGCCCAGGTACCGGCCAGCCC...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAGTCCGTCTTCTGGGCTaGCCGGTACCTGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LKGLGPKSRVPAEEGLSRVRLLG*PVPGLL
Trigger: CAGAAGCCCAGGTACCGGCCAGCCCAGAAGACGGAC...TCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTTTCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATGCCCAGGTCGGGCGCTaGGAACTCGGGGAAGACGTG +
Preference number: 4 (lower is better)
Translates to: LSFLNTDPGSPRLSQSKHAQVGR*ELGEDV
Trigger: CACGTCTTCCCCGAGTTCCCAGCGCCCGACCTGGGC...ATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACACCTGTGTCAAGGTACTaGGGACCGGCCTCAGCACGT +
Preference number: 4 (lower is better)
Translates to: ELQHAAVQLQRLRVSMETPVSRY*GPASAR
Trigger: ACGTGCTGAGGCCGGTCCCCAGTACCTTGACACAGG...TGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCCCTGTGTCAAGGTACTaGGGACCGGCCTCAGCACGT +
Preference number: 4 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGPVSRY*GPASAR
Trigger: ACGTGCTGAGGCCGGTCCCCAGTACCTTGACACAGG...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTGCTCCGGGATTAGTTCAGAGGAGCCTTCCAAGCTCTTaGCAAAGTTACGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: RGPGGTRWGWGAPGLVQRSLPSS*QSYGWP
Trigger: AGGCCATCCGTAACTTTGCCAAGAGCTTGGAAGGCT...CCTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCCACCTGGACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTTGCTGCTTCAGGACCTaGGTGACCACACTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: CSWFGDRTPARSCPTAAACCFRT*VTTLSS
Trigger: GCTGGACAGTGTGGTCACCCAGGTCCTGAAGCAGCA...AGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp AACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGTCGGCGTCTCTCCGGTaGCCTCCGCGACGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: NCSGYVFPWRQTWCLKFRSASLR*PPRRGA
Trigger: AGCACCGCGTCGCGGAGGCCACCGGAGAGACGCCGA...CCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACCCTGCAGGGAGTGGTTaGGGTCACTGCGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHPAGSG*GHCAPA
Trigger: AGCGGGAGCGCAGTGACCCCAACCACTCCCTGCAGG...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGGCTGCGCAGGGACCTaGGGACCCAGAGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMGCAGT*GPRAQL
Trigger: TAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AGGGCACTCCACTTTCCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTCCTTCCACAGCCAGTaGCTTGATGGTGACGGTGAA +
Preference number: 4 (lower is better)
Translates to: RALHFPFLRGLQGRWRALSFHSQ*LDGDGE
Trigger: TTCACCGTCACCATCAAGCCACTGGCTGTGGAAGGA...CAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGGAGTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp AGGGCACTCCACTTTCCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTTAGAAATCGCGTCCTaGGCCGAGGCTCGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RALHFPFLRGLQGRWRALLEIAS*AEARLS
Trigger: AGAAAGACGAGCCTCGGCCCAGGACGCGATTTCTAA...CAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGGAGTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGCCCCGACATCCATGGTaGTGCCCACCATGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMPRHPW*CPPCCG
Trigger: CCCACAGCATGGTGGGCATCACCATGGATGTCGGGG...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp GCCGGTGAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGACAGCCGGTTCAGTGGTaGGTCCGGCTTCAGACGAAT +
Preference number: 4 (lower is better)
Translates to: AGEIQVPRVTRRHLLEPRQPVQW*VRLQTN
Trigger: ATTCGTCTGAAGCCGGACTCACCACTGAACCGGCTG...TCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTCACCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGAGGATGGGGTCGCACTaGCACAGGGAGATAAGCTTG +
Preference number: 4 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALRMGSH*HREISL
Trigger: CAAGCTTATCTCCCTGTGTCAGTGCGACCCCATCCT...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp CTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGACCGGGAGCCCCCGCTTaGGTCAAAGTAAACATCACA +
Preference number: 4 (lower is better)
Translates to: LPGHSDCQLPLKSFGIWRPGAPA*VKVNIT
Trigger: TGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGG...TCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp TCTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCTTCCTTCTTGAACACTaGCCCCGGGAGCCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: SSLQLVWGQNSSTQLSNCFLLEH*PREPPL
Trigger: AAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGAA...GCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATACCCCCTTCCACGTACTaGACCTGGGCAGGATACACG +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRIPPSTY*TWAGYT
Trigger: CGTGTATCCTGCCCAGGTGCAGTACGTGGAAGGGGG...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGAGTAAGAAGCCGTGCTaGTGGGGGCGTACATCTGAG +
Preference number: 4 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALSKKPC*WGRTSE
Trigger: CTCAGATGTACGCCCCCAGCAGCACGGCTTCTTACT...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGAAGTAAGAAGCCGTGCTaGTGGGGGCGTACATCTGAG +
Preference number: 4 (lower is better)
Translates to: LPGHSDCQLPLKSFGIWRSKKPC*WGRTSE
Trigger: CTCAGATGTACGCCCCCAGCAGCACGGCTTCTTACT...TCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAATGGTACTTCGAGTTaGCCCTGGTGCCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRINGTSS*PWCPAA
Trigger: GGCGGCTGGGCACCAGGGGCAACTCGAAGTACCATT...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACCGCATGGCCATGTACTaGGTGTCCTCCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHRMAMY*VSSCSR
Trigger: CCGGCTGCAGGAGGACACGCAGTACATGGCCATGCG...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCATGGTGCATGGGCTGCTaGCGCATGGCCATGTACTGC +
Preference number: 4 (lower is better)
Translates to: LLCSWFGDRTPARSCPTAWCMGC*RMAMYC
Trigger: GCAGTACATGGCCATGCGGCAGCAGCCCATGCACCA...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CTCAGCACAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCACAGTTGCCTCGCAGTaGCGTCTGTACACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSTALSALKGTGAKVQGSTVASQ*RLYTSC
Trigger: GCAGCTGGTGTACAGACGGCACTGCGAGGCAACTGT...GGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTGTGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCCATTTCAGCAAGAACTaGCGGGCGGCCTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSHFSKN*RAALGK
Trigger: CTTCCCCAAGGCCGCCCGGCAGTTCTTGCTGAAATG...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp AGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTTTCGAGCTGCGGATCTaGCGGGACACAGCGATTGTC +
Preference number: 4 (lower is better)
Translates to: SRGGFVQNKEPMVWWGPGFELRI*RDTAIV
Trigger: GACAATCGCTGTGTCCCGGCAGATCCGCAGCTCGAA...ACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCGGTCCTCGGAATTCTGCATaGTCAGGTCTTTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: PFLRGLQGRWRALCLPSGPRNSA*SGLWNF
Trigger: AAAATTCCAAAGACCTGAGCATGCAGAATTCCGAGG...ACCGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359161.7
CDS-3UTR CCA 90 bp CTTTCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCAGAGCCACGGACGCTaGCGAATCCGCTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: LSFLNTDPGSPRLSQSKHQSHGR*RIRSTL
Trigger: GAGGGTGGAGCGGATTCGCCAGCGTCCGTGGCTCTG...ATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGGAGATCGGCTGCATCTaGGCCCCTTTGGGATTGGAG +
Preference number: 4 (lower is better)
Translates to: QLLKGLGPKSRVPAEEGLEIGCI*APLGLE
Trigger: CTCCAATCCCAAAGGGGCCCAGATGCAGCCGATCTC...CAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GCCAGTGGGAGCCCTGGCCTGGGCTTCTGTAGCTTCAACAACTGCTTTCCTTCTGAGATCGGCTGCATCTaGGCCCCTTTGGGATTGGAG +
Preference number: 4 (lower is better)
Translates to: ASGSPGLGFCSFNNCFPSEIGCI*APLGLE
Trigger: CTCCAATCCCAAAGGGGCCCAGATGCAGCCGATCTC...AGAAGGAAAGCAGTTGTTGAAGCTACAGAAGCCCAGGCCAGGGCTCCCACTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCTCCACGTACTGCACCTaGGCAGGATACACGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSSTYCT*AGYTCC
Trigger: GCAGCACGTGTATCCTGCCCAGGTGCAGTACGTGGA...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGTTCGTATGGCTCCATTaGTGTAGACGGCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LCSWFGDRTPARSCPTAAFVWLH*CRRRLP
Trigger: GGGGAGACGCCGTCTACACCAATGGAGCCATACGAA...CGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGATGAGCGGGAGGTGTaGGCCAGGGAGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMDEREV*ARECLV
Trigger: CACCAGACACTCCCTGGCCCACACCTCCCGCTCATC...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACGATGAGCGGGAGGTGTaGGCCAGGGAGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHDEREV*ARECLV
Trigger: CACCAGACACTCCCTGGCCCACACCTCCCGCTCATC...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CCTCCCCAGCGGTGGCAGGTAGGAGGGGAGAGGCCGTCCCTTTCTAGTCGGGCTTTATCCAACAGCCACTaGAGATGGCTGTTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: PPQRWQVGGERPSLSSRALSNSH*RWLLSK
Trigger: TTTACTCAACAGCCATCTCCAGTGGCTGTTGGATAA...AGCCCGACTAGAAAGGGACGGCCTCTCCCCTCCTACCTGCCACCGCTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTGGGCTGCTGCCGCATaGCCATGTACTGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: HAAVQLQRLRVSMETNLVWAAAA*PCTACP
Trigger: AGGACACGCAGTACATGGCCATGCGGCAGCAGCCCA...CACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACTGGGCTGCTGCCGCATaGCCATGTACTGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGPKSRVPAEEGLSRIRNWAAAA*PCTACP
Trigger: AGGACACGCAGTACATGGCCATGCGGCAGCAGCCCA...GTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCATACTGCTGGTGGTGCTaGCTCTGCACGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LLCSWFGDRTPARSCPTAYCWWC*LCTAMV
Trigger: GACCATGGCCGTGCAGAGCCAGCACCACCAGCAGTA...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGATACTGCTGGTGGTGCTaGCTCTGCACGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LKGLGPKSRVPAEEGLSRYCWWC*LCTAMV
Trigger: GACCATGGCCGTGCAGAGCCAGCACCACCAGCAGTA...TCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTTCTATGTACTGCTGGTaGTGCTGGCTCTGCACGGCC +
Preference number: 4 (lower is better)
Translates to: SRGGFVQNKEPMVWWGPGSMYCW*CWLCTA
Trigger: GGCCGTGCAGAGCCAGCACCACCAGCAGTACATAGA...ACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTCGGGGTCTTCGTCACTaGCAGGAAGAGAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SRVPAEEGLSRIRNPWSGRGLRH*QEERWG
Trigger: GCCCCACCTCTCTTCCTGCCAGTGACGAAGACCCCG...ACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATACCTGTGTCAAGGTACTaGGGACCGGCCTCAGCACGT +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRIPVSRY*GPASAR
Trigger: ACGTGCTGAGGCCGGTCCCCAGTACCTTGACACAGG...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACAAGGAACCCATGGTCTaGTGGGGCCCTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHKEPMV*WGPGGC
Trigger: GCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTT...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGATTTGGCATCTGGAGATaGGTTCCTGCAGCACAGCCG +
Preference number: 4 (lower is better)
Translates to: LPGHSDCQLPLKSFGIWRFGIWR*VPAAQP
Trigger: CGGCTGTGCTGCAGGAACCCATCTCCAGATGCCAAA...TCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp AGGGCACTCCACTTTCCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGAAGTCCTTTGGCATCTaGAGATGGGTTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RALHFPFLRGLQGRWRALKSFGI*RWVPAA
Trigger: TGCTGCAGGAACCCATCTCCAGATGCCAAAGGACTT...CAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGGAGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACGCAGGCACTGCTGTTTaGACGACACGCGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: LGPKSRVPAEEGLSRIRNAGTAV*TTRGMA
Trigger: AGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGC...GTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CCTCCCCAGCGGTGGCAGGTAGGAGGGGAGAGGCCGTCCCTTTCTAGTCGGGCTGAAACCAGCTTGTATTaGTTACCAGGAGTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PPQRWQVGGERPSLSSRAETSLY*LPGVRK
Trigger: TTTCCTCACTCCTGGTAACCAATACAAGCTGGTTTC...AGCCCGACTAGAAAGGGACGGCCTCTCCCCTCCTACCTGCCACCGCTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp CAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTTATCCAACAGCCACTaGAGCGTGGCGGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: QLLKGLGPKSRVPAEEGLLSNSH*SVAGDE
Trigger: CTCATCGCCCGCCACGCTCCAGTGGCTGTTGGATAA...CAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592546.5
3UTR CAA 72 bp CTGGGCCGAGGCTCGTCTTTCTTCTCTGCAGTTGGTTaGGGGACAGAACTCCAGCACGCAGCTGTCCAACTG +
Preference number: 4 (lower is better)
Translates to: LGRGSSFFSAVG*GTELQHAAVQL
Trigger: CAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGAAAGACGAGCCTCGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp CTTTCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCCCCGACATCCATGGTaGTGCCCACCATGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LSFLNTDPGSPRLSQSKHPRHPW*CPPCCG
Trigger: CCCACAGCATGGTGGGCATCACCATGGATGTCGGGG...ATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATACAGCCGGTTCAGTGGTaGGTCCGGCTTCAGACGAAT +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRIQPVQW*VRLQTN
Trigger: ATTCGTCTGAAGCCGGACTCACCACTGAACCGGCTG...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCAGGATGGGGTCGCACTaGCACAGGGAGATAAGCTTG +
Preference number: 4 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGRMGSH*HREISL
Trigger: CAAGCTTATCTCCCTGTGTCAGTGCGACCCCATCCT...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp GAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACACCACCTTGGTCTGGATaGCCTGTTGTGGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: ELQHAAVQLQRLRVSMETPPWSG*PVVGSH
Trigger: GTGACTTCCCACAACAGGTCATCCAGACCAAGGTGG...TGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCCCACCTTGGTCTGGATaGCCTGTTGTGGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSPPWSG*PVVGSH
Trigger: GTGACTTCCCACAACAGGTCATCCAGACCAAGGTGG...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCATCCAGGTTCCCAGAGTaGCCAGGCGGCATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LLCSWFGDRTPARSCPTASRFPE*PGGIFW
Trigger: CCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGA...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGATTTGGTGGAGCCGGTaGAATCCAGGTTCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLEIWWSR*NPGSQS
Trigger: ACTCTGGGAACCTGGATTTCACCGGCTCCACCAAAT...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCCCGGGAGCCCCCGCTTaGGTCAAAGTAAACATCACA +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSPGAPA*VKVNIT
Trigger: TGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGG...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAACTGCTTTCCTTCTTaGACACTGACCCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSNCFPS*TLTPGA
Trigger: GGCTCCCGGGGTCAGTGTTCAAGAAGGAAAGCAGTT...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp CTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACTCCACTTTCCATTCCTaGGGGGACTCCAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: LGPKSRVPAEEGLSRIRNSTFHS*GDSRDA
Trigger: AGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGGA...GTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGCCACCCTCGGAATTCTaGATGCTCAGGTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALPPSEF*MLRSGV
Trigger: AACTCCAGACCTGAGCATGCAGAATTCCGAGGGTGG...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000592546.5
CDS-3UTR GCA 90 bp CAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGCGAAGTAAGAAGCCGTaGTGCTGGGGGCGTACATCT +
Preference number: 4 (lower is better)
Translates to: QPFQLLKGLGPKSRVPAERSKKP*CWGRTS
Trigger: AGATGTACGCCCCCAGCAGCACGGCTTCTTACTTCG...CTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGACTGGGTCTAGCTTGTaGTCCTGGCAGTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: HAAVQLQRLRVSMETNLVTGSSL*SWQCRR
Trigger: CCTTCGGCACTGCCAGGAGCACAAGCTAGACCCAGT...CACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACTACTGCGTGTCCTCCTaGAGCCGGTTCAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LGPKSRVPAEEGLSRIRNYCVSS*SRFSGE
Trigger: CTCACCACTGAACCGGCTGCAGGAGGACACGCAGTA...GTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp AGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGCGCATGGCCATGTACTaGGTGTCCTCCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SGYVFPWRQTWCLKFRASRMAMY*VSSCSR
Trigger: CCGGCTGCAGGAGGACACGCAGTACATGGCCATGCG...CGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATATTCTGGTGCATGGGCTaGTGCCGCATGGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRIFWCMG*CRMAMY
Trigger: GTACATGGCCATGCGGCAGCAGCCCATGCACCAGAA...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp GTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTTGTTCCGGAGTGCTGTaGAGGCCGCTGTGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: VQLQRLRVSMETNLVSQVCSGVL*RPLWEP
Trigger: CGGCTCCCACAGCGGCCTGCACAGCACTCCGGAACA...AACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCTGGTCTGTTCCGGAGTaGTGTGCAGGCCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHIWSVPE*CAGRCG
Trigger: CCCACAGCGGCCTGCACAGCACTCCGGAACAGACCA...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGGAGACATCTATGTACTaGTGGTGGTGCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LCSWFGDRTPARSCPTAAETSMY*WWCWLC
Trigger: GCAGAGCCAGCACCACCAGCAGTACATAGATGTCTC...CGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CTTTCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATAGGGCCTTGACGTCGTaGAGTGTGACGCCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LSFLNTDPGSPRLSQSKHRALTS*SVTPSC
Trigger: GCAGGACGGCGTCACACTGCACGACGTCAAGGCCCT...ATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCACATTTCAGCAAGAACTaGCGGGCGGCCTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LLCSWFGDRTPARSCPTAHFSKN*RAALGK
Trigger: CTTCCCCAAGGCCGCCCGGCAGTTCTTGCTGAAATG...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp TCTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCCATTTCAGCAAGAACTaGCGGGCGGCCTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSLQLVWGQNSSTQLSNCHFSKN*RAALGK
Trigger: CTTCCCCAAGGCCGCCCGGCAGTTCTTGCTGAAATG...GCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp TTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGAAAGTCCCGAATCTGGGCCCGCCTCGCTaGCACGCTGCTCATCGCCCA +
Preference number: 4 (lower is better)
Translates to: FPWRQTWCLKFRASKVPNLGPPR*HAAHRP
Trigger: TGGGCGATGAGCAGCGTGGCAGCGAGGCGGGCCCAG...ATTCGGGACTTTCGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp TGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTACAGCGATTGTCAGCTaGCCCTCAAGTCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: CSWFGDRTPARSCPTAAATAIVS*PSSPLA
Trigger: TGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGT...AGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAGCGGCTGCTGCGTGTTaGTCCCCGTTGGTAAGTAAC +
Preference number: 4 (lower is better)
Translates to: LKGLGPKSRVPAEEGLSRAAAAC*SPLVSN
Trigger: GTTACTTACCAACGGGGACCAACACGCAGCAGCCGC...TCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000592546.5
CDS-3UTR CCA 90 bp TCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTCTGCATGCTCAGGTCTaGAGTTCGGGCCGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SRVPAEEGLSRIRNPWSGLHAQV*SSGREF
Trigger: GAACTCCCGGCCCGAACTCCAGACCTGAGCATGCAG...ACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000592546.5
CDS-3UTR CCA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACGCATCTGGGCCCCTTTaGGATTGGAGCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHASGPL*DWSWLP
Trigger: AGGCAGCCAGCTCCAATCCCAAAGGGGCCCAGATGC...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAGTACCTGCTGAACTCTaGGGAGGGAGATCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRIVPAEL*GGRSAA
Trigger: TGCAGCCGATCTCCCTCCCCAGAGTTCAGCAGGTAC...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGTACCTGCTGAACTCTaGGGAGGGAGATCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLCSWFGDRTPARSCPTAVPAEL*GGRSAA
Trigger: TGCAGCCGATCTCCCTCCCCAGAGTTCAGCAGGTAC...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACGTACCTGCTGAACTCTaGGGAGGGAGATCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGPKSRVPAEEGLSRIRNVPAEL*GGRSAA
Trigger: TGCAGCCGATCTCCCTCCCCAGAGTTCAGCAGGTAC...GTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCTTCGTATGGCTCCATTaGTGTAGACGGCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSFVWLH*CRRRLP
Trigger: GGGGAGACGCCGTCTACACCAATGGAGCCATACGAA...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGAGGCTGTCCGTCTTCTaGGCTGGCCGGTACCTGGGC +
Preference number: 4 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPERLSVF*AGRYLG
Trigger: GCCCAGGTACCGGCCAGCCCAGAAGACGGACAGCCT...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGACATCTATGTACTGCTaGTGGTGCTGGCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLETSMYC*WCWLCT
Trigger: CGTGCAGAGCCAGCACCACCAGCAGTACATAGATGT...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp AGCGGGACGCAGGCACTGCTGTTTGGACGACACGCGGGATGGCTGCTTTCTGAAAACTCGGGGAAGACGTaGGAGACATCTATGTACTGC +
Preference number: 4 (lower is better)
Translates to: SGTQALLFGRHAGWLLSENSGKT*ETSMYC
Trigger: GCAGTACATAGATGTCTCCCACGTCTTCCCCGAGTT...TTCAGAAAGCAGCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAACGCCCACCTTGGTCTaGATGACCTGTTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ELQHAAVQLQRLRVSMETTPTLV*MTCCGK
Trigger: CTTCCCACAACAGGTCATCCAGACCAAGGTGGGCGT...TGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCACGCCCACCTTGGTCTaGATGACCTGTTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSTPTLV*MTCCGK
Trigger: CTTCCCACAACAGGTCATCCAGACCAAGGTGGGCGT...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGAAGGTCGCTGAGCATCTaGTTGATCTGGGACGTGTTC +
Preference number: 4 (lower is better)
Translates to: LPGHSDCQLPLKSFGIWRRSLSI*LIWDVF
Trigger: GAACACGTCCCAGATCAACCAGATGCTCAGCGACCT...TCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTAGCCAGCTGGCCCACTaGTCCAGGGAGCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VQLQRLRVSMETNLVSQVSQLAH*SRELCC
Trigger: GCAGCAGAGCTCCCTGGACCAGTGGGCCAGCTGGCT...AACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp AGAGAAAACTATTGCATTTCGTTAGAAATCGCGTCCTGGGCCGAGGCTCGTCTTCGGCCTTGGGGAAGCTaGGGCTGCCGGCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: RENYCISLEIASWAEARLRPWGS*GCRHAA
Trigger: AGCAGCATGCCGGCAGCCCCAGCTTCCCCAAGGCCG...AAGACGAGCCTCGGCCCAGGACGCGATTTCTAACGAAATGCAATAGTTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CTTTCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCCAGGCGGCATCTTTTaGAACCTCGAGGAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: LSFLNTDPGSPRLSQSKHPGGIF*NLEEAP
Trigger: CGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGG...ATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GCCGGTGAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGCCCCTCAAGTCCTTTaGCATCTGGAGATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: AGEIQVPRVTRRHLLEPRAPQVL*HLEMGS
Trigger: GGAACCCATCTCCAGATGCCAAAGGACTTGAGGGGC...TCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTCACCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGTCCTTCCACAGCCAGTaGCTTGATGGTGACGGTGAA +
Preference number: 4 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALSFHSQ*LDGDGE
Trigger: TTCACCGTCACCATCAAGCCACTGGCTGTGGAAGGA...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGGACGACACGCGGGATaGCTGCTTTCTGAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGGRHAG*LLSEVV
Trigger: CACAACTTCAGAAAGCAGCCATCCCGCGTGTCGTCC...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
3UTR CAA 72 bp TCTTTTTCGAGCTGCGGATCTGCCGGGACACAGCGATaGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: SFSSCGSAGTQR*SAAPQVLWHLE
Trigger: CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGATCCGCAGCTCGAAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp TCTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCCCACCTTGGTCTGGATaGCCTGTTGTGGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SSLQLVWGQNSSTQLSNCPPWSG*PVVGSH
Trigger: GTGACTTCCCACAACAGGTCATCCAGACCAAGGTGG...GCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGTCCAGGTTCCCAGAGTaGCCAGGCGGCATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMSRFPE*PGGIFW
Trigger: CCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGA...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAACTGCTTTCCTTCTTaGACACTGACCCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRINCFPS*TLTPGA
Trigger: GGCTCCCGGGGTCAGTGTTCAAGAAGGAAAGCAGTT...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp CCTCCCCAGCGGTGGCAGGTAGGAGGGGAGAGGCCGTCCCTTTCTAGTCGGGCTCAAAACATTTGGGACTaGATATACTGCAATGTACAC +
Preference number: 4 (lower is better)
Translates to: PPQRWQVGGERPSLSSRAQNIWD*IYCNVH
Trigger: GTGTACATTGCAGTATATTCAGTCCCAAATGTTTTG...AGCCCGACTAGAAAGGGACGGCCTCTCCCCTCCTACCTGCCACCGCTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR GCA 90 bp GGAAAAGCCGGGCATTACAATCCGTTAACTGTGAGCTTCAGTGTCTCCAAGGAGTGGGCAGGATACACGTaGTGCACCGGCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: GKAGHYNPLTVSFSVSKEWAGYT*CTGCTC
Trigger: GCAGGTGCAGCCGGTGCAGCACGTGTATCCTGCCCA...CTCCTTGGAGACACTGAAGCTCACAGTTAACGGATTGTAATGCCCGGCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR GCA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCCCCCCTTCCACGTACTaGACCTGGGCAGGATACACG +
Preference number: 4 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHIPPSTY*TWAGYT
Trigger: CGTGTATCCTGCCCAGGTGCAGTACGTGGAAGGGGG...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGACTGGGTCTAGCTTGTaGTCCTGGCAGTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMTGSSL*SWQCRR
Trigger: CCTTCGGCACTGCCAGGAGCACAAGCTAGACCCAGT...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCTGGTGCATGGGCTGCTaGCGCATGGCCATGTACTGC +
Preference number: 4 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHIWCMGC*RMAMYC
Trigger: GCAGTACATGGCCATGCGGCAGCAGCCCATGCACCA...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCTACCTGGGCTTCTGGTaGATGGGCTGCTGCCGCATG +
Preference number: 4 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHIYLGFW*MGCCRM
Trigger: CATGCGGCAGCAGCCCATGCACCAGAAGCCCAGGTA...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCTGGTGGTGCTGGCTCTaGACGGCCATGGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHIWWCWL*TAMVCS
Trigger: GGAACAGACCATGGCCGTGCAGAGCCAGCACCACCA...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGATGTACTGCTGGTGGTaGTGGCTCTGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMMYCWW*WLCTAM
Trigger: CATGGCCGTGCAGAGCCAGCACCACCAGCAGTACAT...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGACATCTATGTACTaGTGGTGGTGCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QPFQLLKGLGPKSRVPAEETSMY*WWCWLC
Trigger: GCAGAGCCAGCACCACCAGCAGTACATAGATGTCTC...CTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GCCGGTGAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGAGACATCTATGTACTaGTGGTGGTGCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AGEIQVPRVTRRHLLEPRETSMY*WWCWLC
Trigger: GCAGAGCCAGCACCACCAGCAGTACATAGATGTCTC...TCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTCACCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCGCCTCGCTGCCACGCTaGTCATCGCCCATGTCATCT +
Preference number: 4 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHIASLPR*SSPMSS
Trigger: AGATGACATGGGCGATGAGCAGCGTGGCAGCGAGGC...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GCCGGTGAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAACATCTATGTACTGCTaGTGGTGCTGGCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: AGEIQVPRVTRRHLLEPRTSMYC*WCWLCT
Trigger: CGTGCAGAGCCAGCACCACCAGCAGTACATAGATGT...TCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTCACCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGATGGCAAAGTTACGGATaGCCTGTGTCAAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: LPGHSDCQLPLKSFGIWRWQSYG*PVSRYW
Trigger: CCAGTACCTTGACACAGGCCATCCGTAACTTTGCCA...TCTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGGGTCCCGGATCACCATaGAGCTGTAAAAGGACCATT +
Preference number: 4 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLEGPGSP*SCKRTI
Trigger: AATGGTCCTTTTACAGCTCCATGGTGATCCGGGACC...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGAAGGAACCCATGGTCTaGTGGGGCCCTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPEKEPMV*WGPGGC
Trigger: GCAGCCACCAGGGCCCCACCAGACCATGGGTTCCTT...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGAATAAGGAACCCATaGTCTGGTGGGGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRIRIRNP*SGGALV
Trigger: CACCAGGGCCCCACCAGACCATGGGTTCCTTATTCT...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGGGACTCGCTGGGGGTaGGGTGCTCCGGGATTAGTT +
Preference number: 4 (lower is better)
Translates to: NCSGYVFPWRQTWCLKFRGTRWG*GAPGLV
Trigger: AACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCC...CCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp AACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGTTGAAGAGGTCCAGGTaGGACTCGCTGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: NCSGYVFPWRQTWCLKFRLKRSR*DSLGVG
Trigger: CCCCACCCCCAGCGAGTCCCACCTGGACCTCTTCAA...CCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp GACAAACAGTGTGATTATTCCCAGCTTTTCGTTTCTAAAGTGAGCACGCGTCTTAAGCGTGGCGGGCGATaGGCGGGAGGTGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: DKQCDYSQLFVSKVSTRLKRGGR*AGGVGQ
Trigger: CTGGCCCACACCTCCCGCTCATCGCCCGCCACGCTT...AAGACGCGTGCTCACTTTAGAAACGAAAAGCTGGGAATAATCACACTGTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR TCA 90 bp AACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGTTCCTTCTTGAACACTaGCCCCGGGAGCCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: NCSGYVFPWRQTWCLKFRFLLEH*PREPPL
Trigger: AAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGAA...CCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp TCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTAACTGCTTTCCTTCTTaGACACTGACCCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SRVPAEEGLSRIRNPWSGNCFPS*TLTPGA
Trigger: GGCTCCCGGGGTCAGTGTTCAAGAAGGAAAGCAGTT...ACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGCCTCGGAATTCTGCATaGTCAGGTCTGGAGTTCGGG +
Preference number: 4 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMPRNSA*SGLEFG
Trigger: CCCGAACTCCAGACCTGAGCATGCAGAATTCCGAGG...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000592546.5
CDS-3UTR GCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATACCACCCTCGGAATTCTaGATGCTCAGGTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRIPPSEF*MLRSGV
Trigger: AACTCCAGACCTGAGCATGCAGAATTCCGAGGGTGG...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000592546.5
CDS-3UTR GCA 90 bp AACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGCCCCCTTCCACGTACTaGACCTGGGCAGGATACACG +
Preference number: 4 (lower is better)
Translates to: NCSGYVFPWRQTWCLKFRPPSTY*TWAGYT
Trigger: CGTGTATCCTGCCCAGGTGCAGTACGTGGAAGGGGG...CCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACAGTAAGAAGCCGTGCTaGTGGGGGCGTACATCTGAG +
Preference number: 4 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHSKKPC*WGRTSE
Trigger: CTCAGATGTACGCCCCCAGCAGCACGGCTTCTTACT...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTCGAAGTAAGAAGCCGTaGTGCTGGGGGCGTACATCT +
Preference number: 4 (lower is better)
Translates to: SRVPAEEGLSRIRNPWSGRSKKP*CWGRTS
Trigger: AGATGTACGCCCCCAGCAGCACGGCTTCTTACTTCG...ACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp AACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGAATGGTACTTCGAGTTaGCCCTGGTGCCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: NCSGYVFPWRQTWCLKFRNGTSS*PWCPAA
Trigger: GGCGGCTGGGCACCAGGGGCAACTCGAAGTACCATT...CCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp AACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGTACCTGGGCTTCTGGTaGATGGGCTGCTGCCGCATG +
Preference number: 4 (lower is better)
Translates to: NCSGYVFPWRQTWCLKFRYLGFW*MGCCRM
Trigger: CATGCGGCAGCAGCCCATGCACCAGAAGCCCAGGTA...CCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCGTCTGTACACCAGCTaGAGGGCCTTGACGTCGTGC +
Preference number: 4 (lower is better)
Translates to: VQLQRLRVSMETNLVSQVRLYTS*RALTSC
Trigger: GCACGACGTCAAGGCCCTGCAGCTGGTGTACAGACG...AACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTAGTGGTTGGGGTCACTaGGCTCCCGCTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: VQLQRLRVSMETNLVSQVSGWGH*APALPG
Trigger: CCCTGGTAAAGCGGGAGCGCAGTGACCCCAACCACT...AACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTTGGTTCCAGTTGAGTaGAGAGGCCAGTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: HAAVQLQRLRVSMETNLVLVPVE*RGQCSQ
Trigger: CTGAGAGCACTGGCCTCTGCACTCAACTGGAACCAA...CACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATATGTTCTTTTTCGAGCTaGGGATCTGCCGGGACACAG +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRICSFSS*GSAGTQ
Trigger: CTGTGTCCCGGCAGATCCGCAGCTCGAAAAAGAACA...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGACACGCGGGATGGCTaGTTTCTGAAGTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMDTRDG*FLKLWL
Trigger: CAGCCACAACTTCAGAAAGCAGCCATCCCGCGTGTC...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCTGTAGGCTGTTCGTATaGCTCCATTGGTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGCRLFV*LHWCRR
Trigger: CCGTCTACACCAATGGAGCCATACGAACAGCCTACA...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAACATCTATGTACTGCTaGTGGTGCTGGCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRITSMYC*WCWLCT
Trigger: CGTGCAGAGCCAGCACCACCAGCAGTACATAGATGT...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTCAGCACAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCCTTCCAAGCTCTTaGCAAAGTTACGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: LSTALSALKGTGAKVQGSSLPSS*QSYGWP
Trigger: AGGCCATCCGTAACTTTGCCAAGAGCTTGGAAGGCT...GGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTGTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAAGGTCGCTGAGCATCTaGTTGATCTGGGACGTGTTC +
Preference number: 4 (lower is better)
Translates to: LKGLGPKSRVPAEEGLSRRSLSI*LIWDVF
Trigger: GAACACGTCCCAGATCAACCAGATGCTCAGCGACCT...TCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTAAGGTTTGGGCTATACGACCAGACAAACAGTGTGATTATTCCCAGCTTTTCGCGGCCTTGGGGAAGCTaGGGCTGCCGGCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRFGLYDQTNSVIIPSFSRPWGS*GCRHAA
Trigger: AGCAGCATGCCGGCAGCCCCAGCTTCCCCAAGGCCG...CGAAAAGCTGGGAATAATCACACTGTTTGTCTGGTCGTATAGCCCAAACCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGAGAATAAGGAACCCATaGTCTGGTGGGGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMRIRNP*SGGALV
Trigger: CACCAGGGCCCCACCAGACCATGGGTTCCTTATTCT...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGAGGGAGGTGTTCTaGAAGACTCCGTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: VQLQRLRVSMETNLVSQVQREVF*KTPWSG
Trigger: CCCGCTCCACGGAGTCTTCCAGAACACCTCCCTCTG...AACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp CTCAGCACAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCACTGGAGATGGCTGTTaGGTAAACCGCTTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSTALSALKGTGAKVQGSTGDGC*VNRFCV
Trigger: CACACAAAAGCGGTTTACTCAACAGCCATCTCCAGT...GGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTGTGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp CAGCTGGGTCCCTCCCACATGGTGCTACCAGACAAGGGCACTCCACTTTCCATTACTGGAGATGGCTGTTaGGTAAACCGCTTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: QLGPSHMVLPDKGTPLSITGDGC*VNRFCV
Trigger: CACACAAAAGCGGTTTACTCAACAGCCATCTCCAGT...AATGGAAAGTGGAGTGCCCTTGTCTGGTAGCACCATGTGGGAGGGACCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp AGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGAGGATGGGGTCGCACTaGCACAGGGAGATAAGCTTG +
Preference number: 4 (lower is better)
Translates to: SGYVFPWRQTWCLKFRASRMGSH*HREISL
Trigger: CAAGCTTATCTCCCTGTGTCAGTGCGACCCCATCCT...CGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp GTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTTCCACTTTCCATTCCTaGGGGGACTCCAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: VQLQRLRVSMETNLVSQVSTFHS*GDSRDA
Trigger: AGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGGA...AACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGTTCTGGTGCATGGGCTaGTGCCGCATGGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPEFWCMG*CRMAMY
Trigger: GTACATGGCCATGCGGCAGCAGCCCATGCACCAGAA...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGACAGTTGCCTCGCAGTaGCGTCTGTACACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPETVASQ*RLYTSC
Trigger: GCAGCTGGTGTACAGACGGCACTGCGAGGCAACTGT...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR GCA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCACGCAGCTGTCCAACTaGAGCGGCTACGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHITQLSN*SGYVFP
Trigger: TGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGT...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp TCTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCCCACCCTCGGAATTCTaGATGCTCAGGTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SSLQLVWGQNSSTQLSNCPPSEF*MLRSLE
Trigger: TTCCAAAGACCTGAGCATGCAGAATTCCGAGGGTGG...GCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359161.7
CDS-3UTR CCA 90 bp CTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACTGTAGGCTGTTCGTATaGCTCCATTGGTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: LGPKSRVPAEEGLSRIRNCRLFV*LHWCRR
Trigger: CCGTCTACACCAATGGAGCCATACGAACAGCCTACA...GTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAACAGCCACTGGAGATaGCTGTTGAGTAAACCGCTT +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSNSHWR*LLSKPL
Trigger: AAGCGGTTTACTCAACAGCCATCTCCAGTGGCTGTT...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTGTAAAGAGAACTTCTaGGGAGACTCACACCTTCCG +
Preference number: 4 (lower is better)
Translates to: QLLKGLGPKSRVPAEEGLCKENF*GDSHLP
Trigger: CGGAAGGTGTGAGTCTCCCCAGAAGTTCTCTTTACA...CAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGTGCTGCTTCAGGACCTaGGTGACCACACTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPECCFRT*VTTLSS
Trigger: GCTGGACAGTGTGGTCACCCAGGTCCTGAAGCAGCA...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAAAGTCCTTTGGCATCTaGAGATGGGTTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LKGLGPKSRVPAEEGLSRKSFGI*RWVPAA
Trigger: TGCTGCAGGAACCCATCTCCAGATGCCAAAGGACTT...TCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTTCTCTGCAGTTGGTTTaGGGACAGAACTCCAGCACG +
Preference number: 4 (lower is better)
Translates to: SRVPAEEGLSRIRNPWSGSLQLV*GQNSST
Trigger: CGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGA...ACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCATTTGGTGGAGCCGGTaGAATCCAGGTTCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHIIWWSR*NPGSQS
Trigger: ACTCTGGGAACCTGGATTTCACCGGCTCCACCAAAT...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR TCA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGTTTTCGTTTCTAAAGTaGGCACGCGTCTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLEFSFLK*ARVFVF
Trigger: GAAGACAAAGACGCGTGCTCACTTTAGAAACGAAAA...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR GCA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGCCTCGGAATTCTGCATaGTCAGGTCTGGAGTTCGGG +
Preference number: 4 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPEPRNSA*SGLEFG
Trigger: CCCGAACTCCAGACCTGAGCATGCAGAATTCCGAGG...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000592546.5
CDS-3UTR GCA 90 bp AGAGAAAACTATTGCATTTCGTTAGAAATCGCGTCCTGGGCCGAGGCTCGTCTTACAGTTGCCTCGCAGTaGCGTCTGTACACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RENYCISLEIASWAEARLTVASQ*RLYTSC
Trigger: GCAGCTGGTGTACAGACGGCACTGCGAGGCAACTGT...AAGACGAGCCTCGGCCCAGGACGCGATTTCTAACGAAATGCAATAGTTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp TTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGAAAGTCCCGAATGCCTCGCTGCCACGCTaGTCATCGCCCATGTCATCT +
Preference number: 4 (lower is better)
Translates to: FPWRQTWCLKFRASKVPNASLPR*SSPMSS
Trigger: AGATGACATGGGCGATGAGCAGCGTGGCAGCGAGGC...ATTCGGGACTTTCGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTGACACGCGGGATGGCTaGTTTCTGAAGTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VQLQRLRVSMETNLVSQVDTRDG*FLKLWL
Trigger: CAGCCACAACTTCAGAAAGCAGCCATCCCGCGTGTC...AACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp GACAAACAGTGTGATTATTCCCAGCTTTTCGTTTCTAAAGTGAGCACGCGTCTTGCGGGACGCAGGCACTaGTGTTTGGACGACACGCGG +
Preference number: 4 (lower is better)
Translates to: DKQCDYSQLFVSKVSTRLAGRRH*CLDDTR
Trigger: CCGCGTGTCGTCCAAACAGCAGTGCCTGCGTCCCGC...AAGACGCGTGCTCACTTTAGAAACGAAAAGCTGGGAATAATCACACTGTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR GCA 90 bp TTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGACTCGTCTTTCTTCTCTaGAGTTGGTTTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LKGLGPKSRVPAEEGLSRLVFLL*SWFGDR
Trigger: TCTGTCCCCAAACCAACTGCAGAGAAGAAAGACGAG...TCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAAACAGCCACTGGAGATaGCTGTTGAGTAAACCGCTT +
Preference number: 4 (lower is better)
Translates to: LLCSWFGDRTPARSCPTANSHWR*LLSKPL
Trigger: AAGCGGTTTACTCAACAGCCATCTCCAGTGGCTGTT...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTTTATCCAACAGCCACTaGAGATGGCTGTTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: CSWFGDRTPARSCPTAAALSNSH*RWLLSK
Trigger: TTTACTCAACAGCCATCTCCAGTGGCTGTTGGATAA...AGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACAACTCGGGGAAGACGTaGGAGACATCTATGTACTGC +
Preference number: 4 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHNSGKT*ETSMYC
Trigger: GCAGTACATAGATGTCTCCCACGTCTTCCCCGAGTT...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCACTGGATGACCTGTTGTaGGAAGTCACTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: LLCSWFGDRTPARSCPTALDDLL*EVTHGI
Trigger: AATGCCATGAGTGACTTCCCACAACAGGTCATCCAG...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CAGCTGGGTCCCTCCCACATGGTGCTACCAGACAAGGGCACTCCACTTTCCATTTTTCTTCTCTGCAGTTaGTTTGGGGACAGAACTCCA +
Preference number: 4 (lower is better)
Translates to: QLGPSHMVLPDKGTPLSIFLLCS*FGDRTP
Trigger: TGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGAAA...AATGGAAAGTGGAGTGCCCTTGTCTGGTAGCACCATGTGGGAGGGACCCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp TTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGAAAGTCCCGAATTACTGCGTGTCCTCCTaGAGCCGGTTCAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: FPWRQTWCLKFRASKVPNYCVSS*SRFSGE
Trigger: CTCACCACTGAACCGGCTGCAGGAGGACACGCAGTA...ATTCGGGACTTTCGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGTGTTCTTTTTCGAGCTaGGGATCTGCCGGGACACAG +
Preference number: 4 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPECSFSS*GSAGTQ
Trigger: CTGTGTCCCGGCAGATCCGCAGCTCGAAAAAGAACA...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGTTTAAATCAGTCATTTaGACACCATCCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: LCSWFGDRTPARSCPTAAFKSVI*TPSTML
Trigger: CAGCATGGTGGATGGTGTGCAAATGACTGATTTAAA...CGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359161.7
CDS-3UTR CCA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCTGGCAAAGTTACGGATaGCCTGTGTCAAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHIWQSYG*PVSRYW
Trigger: CCAGTACCTTGACACAGGCCATCCGTAACTTTGCCA...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTGGGAAGTCACTCATaGCATTTGTCAACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMVGSHS*HLSTSL
Trigger: AAGGCTGGTTGACAAATGCCATGAGTGACTTCCCAC...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACCTGGATGACCTGTTGTaGGAAGTCACTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHLDDLL*EVTHGI
Trigger: AATGCCATGAGTGACTTCCCACAACAGGTCATCCAG...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCGGTCCCGGATCACCATaGAGCTGTAAAAGGACCATT +
Preference number: 4 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHIGPGSP*SCKRTI
Trigger: AATGGTCCTTTTACAGCTCCATGGTGATCCGGGACC...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp AGAGAAAACTATTGCATTTCGTTAGAAATCGCGTCCTGGGCCGAGGCTCGTCTTGGACGACACGCGGGATaGCTGCTTTCTGAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: RENYCISLEIASWAEARLGRHAG*LLSEVV
Trigger: CACAACTTCAGAAAGCAGCCATCCCGCGTGTCGTCC...AAGACGAGCCTCGGCCCAGGACGCGATTTCTAACGAAATGCAATAGTTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTTCTCTGCAGTTGGTTTaGGGACAGAACTCCAGCACG +
Preference number: 4 (lower is better)
Translates to: VQLQRLRVSMETNLVSQVSLQLV*GQNSST
Trigger: CGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGA...AACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGAAAATTGGTTCCAGTTaGGTGCAGAGGCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPEKIGSS*VQRPVL
Trigger: GAGCACTGGCCTCTGCACTCAACTGGAACCAATTTT...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp GGAAAAGCCGGGCATTACAATCCGTTAACTGTGAGCTTCAGTGTCTCCAAGGAGATTGGTTACCAGGAGTaGGGAAAAGCCGGGCATTAC +
Preference number: 4 (lower is better)
Translates to: GKAGHYNPLTVSFSVSKEIGYQE*GKAGHY
Trigger: GTAATGCCCGGCTTTTCCTCACTCCTGGTAACCAAT...CTCCTTGGAGACACTGAAGCTCACAGTTAACGGATTGTAATGCCCGGCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp TTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGAAAGTCCCGAATTTCGTATGGCTCCATTaGTGTAGACGGCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: FPWRQTWCLKFRASKVPNFVWLH*CRRRLP
Trigger: GGGGAGACGCCGTCTACACCAATGGAGCCATACGAA...ATTCGGGACTTTCGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAATCATGGTGAAAATTaGTTCCAGTTGAGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSNHGEN*FQLSAE
Trigger: CTCTGCACTCAACTGGAACCAATTTTCACCATGATT...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CAACTAAGGTTTGGGCTATACGACCAGACAAACAGTGTGATTATTCCCAGCTTTTTCTGGAAGACTCCGTaGAGCGGGACGCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: QLRFGLYDQTNSVIIPSFFWKTP*SGTQAL
Trigger: CAGTGCCTGCGTCCCGCTCCACGGAGTCTTCCAGAA...AAAGCTGGGAATAATCACACTGTTTGTCTGGTCGTATAGCCCAAACCTTAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCCCATGGAGACAAACTTaGTGTCTCAAGTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHIPWRQT*CLKFRA
Trigger: AGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGG...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp AGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGCCATGGAGACAAACTTaGTGTCTCAAGTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SGYVFPWRQTWCLKFRASPWRQT*CLKFRA
Trigger: AGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGG...CGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR GCA 90 bp CAACTAAGGTTTGGGCTATACGACCAGACAAACAGTGTGATTATTCCCAGCTTTGTCCCTCCCACATGGTaGTACCAGACAAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: QLRFGLYDQTNSVIIPSFVPPTW*YQTRAL
Trigger: GAGTGCCCTTGTCTGGTAGCACCATGTGGGAGGGAC...AAAGCTGGGAATAATCACACTGTTTGTCTGGTCGTATAGCCCAAACCTTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp CAACTAAGGTTTGGGCTATACGACCAGACAAACAGTGTGATTATTCCCAGCTTTTCCACGTACTGCACCTaGGCAGGATACACGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QLRFGLYDQTNSVIIPSFSTYCT*AGYTCC
Trigger: GCAGCACGTGTATCCTGCCCAGGTGCAGTACGTGGA...AAAGCTGGGAATAATCACACTGTTTGTCTGGTCGTATAGCCCAAACCTTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp AGAGAAAACTATTGCATTTCGTTAGAAATCGCGTCCTGGGCCGAGGCTCGTCTTTGTAGGCTGTTCGTATaGCTCCATTGGTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: RENYCISLEIASWAEARLCRLFV*LHWCRR
Trigger: CCGTCTACACCAATGGAGCCATACGAACAGCCTACA...AAGACGAGCCTCGGCCCAGGACGCGATTTCTAACGAAATGCAATAGTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp GTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTTGTAAAGAGAACTTCTaGGGAGACTCACACCTTCCG +
Preference number: 4 (lower is better)
Translates to: VQLQRLRVSMETNLVSQVCKENF*GDSHLP
Trigger: CGGAAGGTGTGAGTCTCCCCAGAAGTTCTCTTTACA...AACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGGTGGGAAGTCACTCATaGCATTTGTCAACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPEVGSHS*HLSTSL
Trigger: AAGGCTGGTTGACAAATGCCATGAGTGACTTCCCAC...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CCA 90 bp CTAAGGTTTGGGCTATACGACCAGACAAACAGTGTGATTATTCCCAGCTTTTCGACGCCCACCTTGGTCTaGATGACCTGTTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LRFGLYDQTNSVIIPSFSTPTLV*MTCCGK
Trigger: CTTCCCACAACAGGTCATCCAGACCAAGGTGGGCGT...CGAAAAGCTGGGAATAATCACACTGTTTGTCTGGTCGTATAGCCCAAACCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp TTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGAAAGTCCCGAATTTAGAAATCGCGTCCTaGGCCGAGGCTCGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FPWRQTWCLKFRASKVPNLEIAS*AEARLS
Trigger: AGAAAGACGAGCCTCGGCCCAGGACGCGATTTCTAA...ATTCGGGACTTTCGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR TCA 90 bp GACAAACAGTGTGATTATTCCCAGCTTTTCGTTTCTAAAGTGAGCACGCGTCTTCCGGGAGCCCCCGCTTaGGTCAAAGTAAACATCACA +
Preference number: 4 (lower is better)
Translates to: DKQCDYSQLFVSKVSTRLPGAPA*VKVNIT
Trigger: TGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGG...AAGACGCGTGCTCACTTTAGAAACGAAAAGCTGGGAATAATCACACTGTTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR GCA 90 bp CTAAGGTTTGGGCTATACGACCAGACAAACAGTGTGATTATTCCCAGCTTTTCGTTGGTTCCAGTTGAGTaGAGAGGCCAGTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LRFGLYDQTNSVIIPSFSLVPVE*RGQCSQ
Trigger: CTGAGAGCACTGGCCTCTGCACTCAACTGGAACCAA...CGAAAAGCTGGGAATAATCACACTGTTTGTCTGGTCGTATAGCCCAAACCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGTTTCTTCTCTGCAGTTaGTTTGGGGACAGAACTCCA +
Preference number: 4 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPEFLLCS*FGDRTP
Trigger: TGGAGTTCTGTCCCCAAACCAACTGCAGAGAAGAAA...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CCA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAATTTCAACTAAGGTTTaGGCTATACGACCAGACAAA +
Preference number: 4 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRIISTKV*AIRPDK
Trigger: TTTGTCTGGTCGTATAGCCCAAACCTTAGTTGAAAT...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR TCA 90 bp GGAAAAGCCGGGCATTACAATCCGTTAACTGTGAGCTTCAGTGTCTCCAAGGAGTTTTTAAAGGCCACGTaGGCTGACATTAGTACCTTC +
Preference number: 4 (lower is better)
Translates to: GKAGHYNPLTVSFSVSKEFLKAT*ADISTF
Trigger: GAAGGTACTAATGTCAGCTCACGTGGCCTTTAAAAA...CTCCTTGGAGACACTGAAGCTCACAGTTAACGGATTGTAATGCCCGGCTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp CAACTAAGGTTTGGGCTATACGACCAGACAAACAGTGTGATTATTCCCAGCTTTTGTAAAGAGAACTTCTaGGGAGACTCACACCTTCCG +
Preference number: 4 (lower is better)
Translates to: QLRFGLYDQTNSVIIPSFCKENF*GDSHLP
Trigger: CGGAAGGTGTGAGTCTCCCCAGAAGTTCTCTTTACA...AAAGCTGGGAATAATCACACTGTTTGTCTGGTCGTATAGCCCAAACCTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CCA 90 bp CAACTAAGGTTTGGGCTATACGACCAGACAAACAGTGTGATTATTCCCAGCTTTAATCATGGTGAAAATTaGTTCCAGTTGAGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QLRFGLYDQTNSVIIPSFNHGEN*FQLSAE
Trigger: CTCTGCACTCAACTGGAACCAATTTTCACCATGATT...AAAGCTGGGAATAATCACACTGTTTGTCTGGTCGTATAGCCCAAACCTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS CCA 90 bp GACCGCTGGCGGGGACGAGGCTGCCACGGTCACCTGGGCACCGCCTaGGGCCTCGAAGTAAGAAGCCGTGCTGCTGGGGGCGTACATCTG +
Preference number: 5 (lower is better)
Translates to: DRWRGRGCHGHLGTA*GLEVRSRAAGGVHL
Trigger: CAGATGTACGCCCCCAGCAGCACGGCTTCTTACTTCGAGGCCCCAGGCGGTGCCCAGGTGACCGTGGCAGCCTCGTCCCCGCCAGCGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000586302.5
ENST00000586940.1
ENST00000592172.5
ENST00000592473.5
ENST00000592546.5
ENST00000592883.5
ENST00000593241.5
CDS-3UTR CAA 90 bp TGGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCCTGCAGGGAGTGGTaGGGGTCACTGCGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: WWLRRDLGTQSTATASGSPCREW*GSLRSR
Trigger: GCGGGAGCGCAGTGACCCCAACCACTCCCTGCAGGG...GCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS GCA 90 bp ACTGCTGGTGGTGCTGGCTCTGCACGGCCATGGTCTGTTCCGGAGTaGTGTGCAGGCCGCTGTGGGAGCCGCTGTCCCCGAGGCTGTCCG +
Preference number: 5 (lower is better)
Translates to: TAGGAGSARPWSVPE*CAGRCGSRCPRGCP
Trigger: CGGACAGCCTCGGGGACAGCGGCTCCCACAGCGGCCTGCACAGCACTCCGGAACAGACCATGGCCGTGCAGAGCCAGCACCACCAGCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589742.5
ENST00000592337.1
ENST00000592546.5
CDS GCA 90 bp GCCTGGGCTGGGGCGGTCACCTCGCAGTGCCGTCTGTACACCAGCTaGAGGGCCTTGACGTCGTGCAGTGTGACGCCGTCCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: AWAGAVTSQCRLYTS*RALTSCSVTPSCSR
Trigger: CCTGCTGCAGGACGGCGTCACACTGCACGACGTCAAGGCCCTGCAGCTGGTGTACAGACGGCACTGCGAGGTGACCGCCCCAGCCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588021.5
CDS CCA 90 bp TGGCACAGGCGGGGCTGCCGCCGAGGGACGCAGAGCCACGGACGCTaGCGAATCCGCTCCACCCTCGGAATTCTGCATGCTCAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: WHRRGCRRGTQSHGR*RIRSTLGILHAQVW
Trigger: CCAGACCTGAGCATGCAGAATTCCGAGGGTGGAGCGGATTCGCCAGCGTCCGTGGCTCTGCGTCCCTCGGCGGCAGCCCCGCCTGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303657.10
ENST00000586302.5
ENST00000586940.1
ENST00000592172.5
ENST00000592546.5
CDS CCA 90 bp TGGCACAGGCGGGGCTGCCGCCGAGGGACGCAGAGCCACGGACGCTaGCGAATCCGCTCCACCCTCGGAATTCTGCATGCTCAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: WHRRGCRRGTQSHGR*RIRSTLGILHAQVL
Trigger: CAGCACCTGAGCATGCAGAATTCCGAGGGTGGAGCGGATTCGCCAGCGTCCGTGGCTCTGCGTCCCTCGGCGGCAGCCCCGCCTGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587181.1
CDS GCA 90 bp GAGCCACGGACGCTGGCGAATCCGCTCCACCCTCGGAATTCTGCATaGTCAGGTCTGGAGTTCGGGCCGGGAGTTCGGGCAGCGGCTCCC +
Preference number: 5 (lower is better)
Translates to: EPRTLANPLHPRNSA*SGLEFGPGVRAAAP
Trigger: GGGAGCCGCTGCCCGAACTCCCGGCCCGAACTCCAGACCTGAGCATGCAGAATTCCGAGGGTGGAGCGGATTCGCCAGCGTCCGTGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303657.10
ENST00000586302.5
ENST00000586940.1
ENST00000592172.5
ENST00000592546.5
CDS GCA 90 bp CGCAGAGCCACGGACGCTGGCGAATCCGCTCCACCCTCGGAATTCTaGATGCTCAGGTCTGGAGTTCGGGCCGGGAGTTCGGGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: RRATDAGESAPPSEF*MLRSGVRAGSSGSG
Trigger: GCCGCTGCCCGAACTCCCGGCCCGAACTCCAGACCTGAGCATGCAGAATTCCGAGGGTGGAGCGGATTCGCCAGCGTCCGTGGCTCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303657.10
ENST00000586302.5
ENST00000586940.1
ENST00000592172.5
ENST00000592546.5
CDS GCA 90 bp TGGTGGTGCTGGCTCTGCACGGCCATGGTCTGTTCCGGAGTGCTGTaGAGGCCGCTGTGGGAGCCGCTGTCCCCGAGGCTGTCCGTCTTC +
Preference number: 5 (lower is better)
Translates to: WWCWLCTAMVCSGVL*RPLWEPLSPRLSVF
Trigger: GAAGACGGACAGCCTCGGGGACAGCGGCTCCCACAGCGGCCTGCACAGCACTCCGGAACAGACCATGGCCGTGCAGAGCCAGCACCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589742.5
ENST00000592337.1
ENST00000592546.5
CDS-3UTR CAA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCTGCATCTGGGCCCCTTaGGGATTGGAGCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGACIWAP*GLELAA
Trigger: GGCAGCCAGCTCCAATCCCAAAGGGGCCCAGATGCA...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCACCAGCTGCAGGGCCTaGACGTCGTGCAGTGTGACG +
Preference number: 5 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGATSCRA*TSCSVT
Trigger: CGTCACACTGCACGACGTCAAGGCCCTGCAGCTGGT...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp TGGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCGCAGGCACTGCTGTTaGGACGACACGCGGGATGGC +
Preference number: 5 (lower is better)
Translates to: WWLRRDLGTQSTATASGSRRHCC*DDTRDG
Trigger: GCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCG...GCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS GCA 90 bp TACACCAGCTGCAGGGCCTTGACGTCGTGCAGTGTGACGCCGTCCTaGAGCAGGAAGCTGCCCAGGTCGGGCGCTGGGAACTCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: YTSCRALTSCSVTPS*SRKLPRSGAGNSGK
Trigger: CTTCCCCGAGTTCCCAGCGCCCGACCTGGGCAGCTTCCTGCTGCAGGACGGCGTCACACTGCACGACGTCAAGGCCCTGCAGCTGGTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589340.1
ENST00000589742.5
ENST00000592546.5
CDS GCA 90 bp TTACCAGGGGCTCACCCAGGCTGCGGGCGTCTGGGCCCGCCTCGCTaGCACGCTGCTCATCGCCCATGTCATCTTTGTCGAGCAGCGTCA +
Preference number: 5 (lower is better)
Translates to: LPGAHPGCGRLGPPR*HAAHRPCHLCRAAS
Trigger: TGACGCTGCTCGACAAAGATGACATGGGCGATGAGCAGCGTGGCAGCGAGGCGGGCCCAGACGCCCGCAGCCTGGGTGAGCCCCTGGTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000590778.1
ENST00000592546.5
CDS CCA 90 bp TGGCACAGGCGGGGCTGCCGCCGAGGGACGCAGAGCCACGGACGCTaGCGAATCCGCTCCACCCTCGGAATTCTGCATGCTCAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: WHRRGCRRGTQSHGR*RIRSTLGILHAQVF
Trigger: AAAGACCTGAGCATGCAGAATTCCGAGGGTGGAGCGGATTCGCCAGCGTCCGTGGCTCTGCGTCCCTCGGCGGCAGCCCCGCCTGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359161.7
CDS CCA 90 bp GAGATCGGCTGCATCTGGGCCCCTTTGGGATTGGAGCTGGCTGCCTaGACCAACACCCTCTGGAGTTCGGGCCGGGAGTTCGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: EIGCIWAPLGLELAA*TNTLWSSGREFGQR
Trigger: CCGCTGCCCGAACTCCCGGCCCGAACTCCAGAGGGTGTTGGTCCAGGCAGCCAGCTCCAATCCCAAAGGGGCCCAGATGCAGCCGATCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593241.5
CDS-3UTR CAA 90 bp CCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCCAGCGGTTGCATCTGGGCCCCTTaGGGATTGGAGCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PFLRGLQGRWRALCLPSGCIWAP*GLELAA
Trigger: GGCAGCCAGCTCCAATCCCAAAGGGGCCCAGATGCA...ACCGCTGGGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS GCA 90 bp GAGGGAGATCGGCTGCATCTGGGCCCCTTTGGGATTGGAGCTGGCTaGCTGGACCAACACCCTCTGGAGTTCGGGCCGGGAGTTCGGGCA +
Preference number: 5 (lower is better)
Translates to: EGDRLHLGPFGIGAG*LDQHPLEFGPGVRA
Trigger: TGCCCGAACTCCCGGCCCGAACTCCAGAGGGTGTTGGTCCAGGCAGCCAGCTCCAATCCCAAAGGGGCCCAGATGCAGCCGATCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593241.5
CDS CCA 90 bp GGGCTGGCCGGTACCTGGGCTTCTGGTGCATGGGCTGCTGCCGCATaGCCATGTACTGCGTGTCCTCCTGCAGCCGGTTCAGTGGTGAGT +
Preference number: 5 (lower is better)
Translates to: GLAGTWASGAWAAAA*PCTACPPAAGSVVS
Trigger: ACTCACCACTGAACCGGCTGCAGGAGGACACGCAGTACATGGCCATGCGGCAGCAGCCCATGCACCAGAAGCCCAGGTACCGGCCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000586806.1
ENST00000588021.5
ENST00000592337.1
ENST00000592546.5
CDS-3UTR CAA 90 bp GTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTTCACTGGGTCTAGCTaGTGCTCCTGGCAGTGCCGA +
Preference number: 5 (lower is better)
Translates to: VAAQGPGDPEHSYSQWEPFTGSS*CSWQCR
Trigger: TCGGCACTGCCAGGAGCACAAGCTAGACCCAGTGAA...GGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCTTCACTGGGTCTAGCTaGTGCTCCTGGCAGTGCCGA +
Preference number: 5 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGAFTGSS*CSWQCR
Trigger: TCGGCACTGCCAGGAGCACAAGCTAGACCCAGTGAA...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp TGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTCACAGGGAGATAAGCTaGTCCTTGGGCAGGACGGCG +
Preference number: 5 (lower is better)
Translates to: WLRRDLGTQSTATASGSPHREIS*SLGRTA
Trigger: CGCCGTCCTGCCCAAGGACAAGCTTATCTCCCTGTG...AGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp TGGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCACAGGGAGATAAGCTaGTCCTTGGGCAGGACGGCG +
Preference number: 5 (lower is better)
Translates to: WWLRRDLGTQSTATASGSHREIS*SLGRTA
Trigger: CGCCGTCCTGCCCAAGGACAAGCTTATCTCCCTGTG...GCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CCACTTTCCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGTGCCTCCCGAGATAAGCTTGTCCTaGGGCAGGACGGCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: PLSIPEGTPGTLASSVPPEISLS*GRTAPS
Trigger: CGAGGGCGCCGTCCTGCCCAAGGACAAGCTTATCTC...GGGAGGCACAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS CCA 90 bp GGGAGACATCTATGTACTGCTGGTGGTGCTGGCTCTGCACGGCCATaGTCTGTTCCGGAGTGCTGTGCAGGCCGCTGTGGGAGCCGCTGT +
Preference number: 5 (lower is better)
Translates to: GRHLCTAGGAGSARP*SVPECCAGRCGSRC
Trigger: ACAGCGGCTCCCACAGCGGCCTGCACAGCACTCCGGAACAGACCATGGCCGTGCAGAGCCAGCACCACCAGCAGTACATAGATGTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589742.5
ENST00000592337.1
ENST00000592546.5
CDS CCA 90 bp CAGTGTGACGCCGTCCTGCAGCAGGAAGCTGCCCAGGTCGGGCGCTaGGAACTCGGGGAAGACGTGGGAGACATCTATGTACTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: QCDAVLQQEAAQVGR*ELGEDVGDIYVLLV
Trigger: CACCAGCAGTACATAGATGTCTCCCACGTCTTCCCCGAGTTCCCAGCGCCCGACCTGGGCAGCTTCCTGCTGCAGGACGGCGTCACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589742.5
ENST00000592546.5
CDS-3UTR CAA 90 bp GCCTCGGGGCATCCGGCAGGGAGGTCTGGATCTAAAAGGCCACAGGGCGCTGCGCAGCCTTCCAAGCTCTaGGCAAAGTTACGGATGGCC +
Preference number: 5 (lower is better)
Translates to: ASGHPAGRSGSKRPQGAAQPSKL*AKLRMA
Trigger: GGCCATCCGTAACTTTGCCAAGAGCTTGGAAGGCTG...CGCAGCGCCCTGTGGCCTTTTAGATCCAGACCTCCCTGCCGGATGCCCCGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCCCCTGCAGGGAGTGGTaGGGGTCACTGCGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGPCREW*GSLRSR
Trigger: GCGGGAGCGCAGTGACCCCAACCACTCCCTGCAGGG...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp TGGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCAACTGCTTTCCTTCTaGAACACTGACCCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: WWLRRDLGTQSTATASGSQLLSF*NTDPGS
Trigger: GCTCCCGGGGTCAGTGTTCAAGAAGGAAAGCAGTTG...GCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCTTCTCTGCAGTTGGTTaGGGGACAGAACTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGAFSAVG*GTELQH
Trigger: GTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAA...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS TCA 90 bp AGGATGTGGTCGCAGCTCCTCATCCACCTGAGGATGGGGTCGCACTaGCACAGGGAGATAAGCTTGTCCTTGGGCAGGACGGCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: RMWSQLLIHLRMGSH*HREISLSLGRTAPS
Trigger: CGAGGGCGCCGTCCTGCCCAAGGACAAGCTTATCTCCCTGTGTCAGTGCGACCCCATCCTCAGGTGGATGAGGAGCTGCGACCACATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000589340.1
ENST00000592546.5
CDS GCA 90 bp GGGAAGACGTGGGAGACATCTATGTACTGCTGGTGGTGCTGGCTCTaGACGGCCATGGTCTGTTCCGGAGTGCTGTGCAGGCCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: GKTWETSMYCWWCWL*TAMVCSGVLCRPLW
Trigger: CCACAGCGGCCTGCACAGCACTCCGGAACAGACCATGGCCGTGCAGAGCCAGCACCACCAGCAGTACATAGATGTCTCCCACGTCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589742.5
ENST00000592337.1
ENST00000592546.5
CDS GCA 90 bp CGGCCTCCGACCACGGTGGTTCTGCCTTCTCTCATTAGCTACCCTTaGTTCAAGCCAAGGAGGACGTCAGGGTCACCGTGGCGGGCGATG +
Preference number: 5 (lower is better)
Translates to: RPPTTVVLPSLISYP*FKPRRTSGSPWRAM
Trigger: CATCGCCCGCCACGGTGACCCTGACGTCCTCCTTGGCTTGAAGCAAGGGTAGCTAATGAGAGAAGGCAGAACCACCGTGGTCGGAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586940.1
CDS-3UTR CAA 90 bp GGTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCAGTCACTCATGGCATTaGTCAACCAGCCTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: GGCAGTWGPRAQLQPVGASHSWH*STSLPS
Trigger: GCTTGGAAGGCTGGTTGACAAATGCCATGAGTGACT...GGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGCCGGCCTGACGACGCCCACCTaGGTCTGGATGACCTGTTGT +
Preference number: 5 (lower is better)
Translates to: QVPRVTRRHLLEPRGGAGLTTPT*VWMTCC
Trigger: ACAACAGGTCATCCAGACCAAGGTGGGCGTCGTCAG...GCCGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATACCCTGCAGGGAGTGGTaGGGGTCACTGCGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRIPCREW*GSLRSR
Trigger: GCGGGAGCGCAGTGACCCCAACCACTCCCTGCAGGG...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp GGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTGCTAAGAGGCACTAATTaGGTGGAGCCGGTGAAATCC +
Preference number: 5 (lower is better)
Translates to: GCAGTWGPRAQLQPVGALLRGTN*VEPVKS
Trigger: GGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAG...CAGGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CCTCCCCAGCGGTGGCAGGTAGGAGGGGAGAGGCCGTCCCTTTCTAGTCGGGCTCCAGCAGAGGAGGGTTaGTCCAGAATAAGGAACCCA +
Preference number: 5 (lower is better)
Translates to: PPQRWQVGGERPSLSSRAPAEEG*SRIRNP
Trigger: TGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG...AGCCCGACTAGAAAGGGACGGCCTCTCCCCTCCTACCTGCCACCGCTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS GCA 90 bp ATCACCACATCTACAGTTGCCTCGCAGTGCCGTCTGTACACCAGCTaGAGGGCCTTGACGTCGTGCAGTGTGACGCCGTCCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ITTSTVASQCRLYTS*RALTSCSVTPSCSR
Trigger: CCTGCTGCAGGACGGCGTCACACTGCACGACGTCAAGGCCCTGCAGCTGGTGTACAGACGGCACTGCGAGGCAACTGTAGATGTGGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000589340.1
ENST00000589742.5
ENST00000592546.5
CDS-3UTR CAA 90 bp AGGGCACTCCACTTTCCATTCCTGAGGGGACTCCAGGGACGCTGGCGAGCTCTGCTGACGACGCCCACCTaGGTCTGGATGACCTGTTGT +
Preference number: 5 (lower is better)
Translates to: RALHFPFLRGLQGRWRALLTTPT*VWMTCC
Trigger: ACAACAGGTCATCCAGACCAAGGTGGGCGTCGTCAG...CAGAGCTCGCCAGCGTCCCTGGAGTCCCCTCAGGAATGGAAAGTGGAGTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp CTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGACCAGGCGGCATCTTTaGGAACCTCGAGGAGGCGCC +
Preference number: 5 (lower is better)
Translates to: LCSWFGDRTPARSCPTAATRRHL*EPRGGA
Trigger: GGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGT...CGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCCGCAGGCACTGCTGTTaGGACGACACGCGGGATGGC +
Preference number: 5 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSRRHCC*DDTRDG
Trigger: GCCATCCCGCGTGTCGTCCAAACAGCAGTGCCTGCG...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS CCA 90 bp AGGCCAGACTTCATGGCAGCAACACACCCCCTGCTCTACGTTCCCTaGGGAACCCAGAGGCTGAGTGATCCTAAGACGTGCAGGCCTACG +
Preference number: 5 (lower is better)
Translates to: RPDFMAATHPLLYVP*GTQRLSDPKTCRPT
Trigger: CGTAGGCCTGCACGTCTTAGGATCACTCAGCCTCTGGGTTCCCCAGGGAACGTAGAGCAGGGGGTGTGTTGCTGCCATGAAGTCTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590778.1
CDS-3UTR CAA 90 bp CAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTGCATCTGGGCCCCTTaGGGATTGGAGCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: QLLKGLGPKSRVPAEEGLCIWAP*GLELAA
Trigger: GGCAGCCAGCTCCAATCCCAAAGGGGCCCAGATGCA...CAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCACCAGCTGCAGGGCCTaGACGTCGTGCAGTGTGACG +
Preference number: 5 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSTSCRA*TSCSVT
Trigger: CGTCACACTGCACGACGTCAAGGCCCTGCAGCTGGT...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGAGATAAGCTTGTCCTaGGGCAGGACGGCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGEISLS*GRTAPS
Trigger: CGAGGGCGCCGTCCTGCCCAAGGACAAGCTTATCTC...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGACCAGGCGGCATCTTTaGGAACCTCGAGGAGGCGCC +
Preference number: 5 (lower is better)
Translates to: QLLKGLGPKSRVPAEEGLTRRHL*EPRGGA
Trigger: GGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGT...CAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGCCGGGACACAGCGATaGTCAGCTGCCCCTCAAGTC +
Preference number: 5 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGAGTQR*SAAPQV
Trigger: GACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGC...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp CAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCGCCGGCATGGTGACGGTGAACTaGGACAGAGTCCCACATCCT +
Preference number: 5 (lower is better)
Translates to: QVPRVTRRHLLEPRGGAGMVTVN*DRVPHP
Trigger: AGGATGTGGGACTCTGTCCAAGTTCACCGTCACCAT...GCCGGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp GCCTCGGGGCATCCGGCAGGGAGGTCTGGATCTAAAAGGCCACAGGGCGCTGCGAGAAGAGTTTTGACTTaGAAGAGGTCCAGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: ASGHPAGRSGSKRPQGAARRVLT*KRSRWD
Trigger: GTCCCACCTGGACCTCTTCAAAGTCAAAACTCTTCT...CGCAGCGCCCTGTGGCCTTTTAGATCCAGACCTCCCTGCCGGATGCCCCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS TCA 90 bp ACTGCTGAGTCAAACGCGCCAGTGGGAACATCTCCCGTGGCTTCCTaGCTTCATGTGAGGGGGCACAGGAGAGACGCAGCTAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: TAESNAPVGTSPVAS*LHVRGHRRDAARSS
Trigger: GCTGCTTCTAGCTGCGTCTCTCCTGTGCCCCCTCACATGAAGTCAGGAAGCCACGGGAGATGTTCCCACTGGCGCGTTTGACTCAGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592281.5
CDS-3UTR CAA 90 bp GTGGCTGCGCAGGGACCTGGGGACCCAGAGCACAGCTACAGCCAGTGGGAGCCCTTGAGTAAACCGCTTTaGTGTGATGTGATTCCTTCG +
Preference number: 5 (lower is better)
Translates to: VAAQGPGDPEHSYSQWEPLSKPL*CDVIPS
Trigger: CGAAGGAATCACATCACACAAAAGCGGTTTACTCAA...GGGCTCCCACTGGCTGTAGCTGTGCTCTGGGTCCCCAGGTCCCTGCGCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp CTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACGAGATAAGCTTGTCCTaGGGCAGGACGGCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: LGPKSRVPAEEGLSRIRNEISLS*GRTAPS
Trigger: CGAGGGCGCCGTCCTGCCCAAGGACAAGCTTATCTC...GTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAACCAGGCGGCATCTTTaGGAACCTCGAGGAGGCGCC +
Preference number: 5 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRITRRHL*EPRGGA
Trigger: GGCGCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGT...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp AGAGGTCCAGGTGGGACTCGCTGGGGGTGGGGTGCTCCGGGATTAGTTCAGAGGCCCGAGAGAAGAGTTTaGACTTTGAAGAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RGPGGTRWGWGAPGLVQRPERRV*TLKRSR
Trigger: CCTGGACCTCTTCAAAGTCAAAACTCTTCTCTCGGG...CCTCTGAACTAATCCCGGAGCACCCCACCCCCAGCGAGTCCCACCTGGACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp CCTCCCCAGCGGTGGCAGGTAGGAGGGGAGAGGCCGTCCCTTTCTAGTCGGGCTGATTCCTTCGCTTTTTaGGAGGTTTTCAATCGCCAT +
Preference number: 5 (lower is better)
Translates to: PPQRWQVGGERPSLSSRADSFAF*EVFNRH
Trigger: ATGGCGATTGAAAACCTCCAAAAAAGCGAAGGAATC...AGCCCGACTAGAAAGGGACGGCCTCTCCCCTCCTACCTGCCACCGCTGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCTTCACTGGGTCTAGCTaGTGCTCCTGGCAGTGCCGA +
Preference number: 5 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGFTGSS*CSWQCR
Trigger: TCGGCACTGCCAGGAGCACAAGCTAGACCCAGTGAA...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGTCGCTGAGCATCTGGTaGATCTGGGACGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALSLSIW*IWDVFC
Trigger: GCAGAACACGTCCCAGATCAACCAGATGCTCAGCGA...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp GAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACATCGCCCATGTCATCTTaGTCGAGCAGCGTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: ELQHAAVQLQRLRVSMETSPMSS*SSSVSD
Trigger: GTCGCTGACGCTGCTCGACAAAGATGACATGGGCGA...TGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp GCCAGTGGGAGCCCTGGCCTGGGCTTCTGTAGCTTCAACAACTGCTTTCCTTCTCCCGGGAGCCCCCGCTaGAGTCAAAGTAAACATCAC +
Preference number: 5 (lower is better)
Translates to: ASGSPGLGFCSFNNCFPSPGSPR*SQSKHH
Trigger: GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGG...AGAAGGAAAGCAGTTGTTGAAGCTACAGAAGCCCAGGCCAGGGCTCCCACTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS CCA 90 bp GGCAAATCCACAGAGACAGAAAGTGGATTCACAGTTGCCCGGGGCTaGGAGGAGGAAGGGCAAGTGGCTGTTCATGGCAGGTTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: GKSTETESGFTVARG*EEEGQVAVHGRFRV
Trigger: AACCCTGAACCTGCCATGAACAGCCACTTGCCCTTCCTCCTCCCAGCCCCGGGCAACTGTGAATCCACTTTCTGTCTCTGTGGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590822.1
CDS-3UTR CAA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGCACAGGGAGATAAGCTaGTCCTTGGGCAGGACGGCG +
Preference number: 5 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMHREIS*SLGRTA
Trigger: CGCCGTCCTGCCCAAGGACAAGCTTATCTCCCTGTG...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGGGTCTGGATGACCTGTaGTGGGAAGTCACTCATGGC +
Preference number: 5 (lower is better)
Translates to: QLLKGLGPKSRVPAEEGLGLDDL*WEVTHG
Trigger: GCCATGAGTGACTTCCCACAACAGGTCATCCAGACC...CAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp GAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACATCGCTGAGCATCTGGTaGATCTGGGACGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: ELQHAAVQLQRLRVSMETSLSIW*IWDVFC
Trigger: GCAGAACACGTCCCAGATCAACCAGATGCTCAGCGA...TGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCTCGCTGAGCATCTGGTaGATCTGGGACGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSSLSIW*IWDVFC
Trigger: GCAGAACACGTCCCAGATCAACCAGATGCTCAGCGA...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp GAAATCCAGGTTCCCAGAGTGACCAGGCGGCATCTTTTGGAACCTCGAGGAGGCAGAGAGGCGAGATCGTaGAACTCTCCCATCACAGCG +
Preference number: 5 (lower is better)
Translates to: EIQVPRVTRRHLLEPRGGREARS*NSPITA
Trigger: CGCTGTGATGGGAGAGTTCAACGATCTCGCCTCTCT...GCCTCCTCGAGGTTCCAAAAGATGCCGCCTGGTCACTCTGGGAACCTGGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGCCAGCAGAGGAGGGTTaGTCCAGAATAAGGAACCCA +
Preference number: 5 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALPAEEG*SRIRNP
Trigger: TGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp AGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTTGCCCCTCAAGTCCTTaGGCATCTGGAGATGGGTTC +
Preference number: 5 (lower is better)
Translates to: SRGGFVQNKEPMVWWGPGCPSSP*ASGDGF
Trigger: GAACCCATCTCCAGATGCCAAAGGACTTGAGGGGCA...ACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp CAGCTGGGTCCCTCCCACATGGTGCTACCAGACAAGGGCACTCCACTTTCCATTTCCACAGCCAGTGGCTaGATGGTGACGGTGAACTTG +
Preference number: 5 (lower is better)
Translates to: QLGPSHMVLPDKGTPLSISTASG*MVTVNL
Trigger: CAAGTTCACCGTCACCATCAAGCCACTGGCTGTGGA...AATGGAAAGTGGAGTGCCCTTGTCTGGTAGCACCATGTGGGAGGGACCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp TCTGCCGGGACACAGCGATTGTCAGCTGCCCCTCAAGTCCTTTGGCATCTGGAGTTCTCTGCAGTTGGTTaGGGGACAGAACTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: SAGTQRLSAAPQVLWHLEFSAVG*GTELQH
Trigger: GTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAA...CTCCAGATGCCAAAGGACTTGAGGGGCAGCTGACAATCGCTGTGTCCCGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS TCA 90 bp CCTCGGAATTCTGCATGCTCAGGTTTGACCTTTTGGAGCCACTGCTaGGTCAAACGCGCCAGTGGGAACATCTCCCGTGGCTTCCTGACT +
Preference number: 5 (lower is better)
Translates to: PRNSACSGLTFWSHC*VKRASGNISRGFLT
Trigger: AGTCAGGAAGCCACGGGAGATGTTCCCACTGGCGCGTTTGACTCAGCAGTGGCTCCAAAAGGTCAAACCTGAGCATGCAGAATTCCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592281.5
CDS CCA 90 bp GTGGGAAGTCACTCATGGCATTTGTCAACCAGCCTTCCAAGCTCTTaGCAAAGTTACGGATGGCCTGTGTCAAGGTACTGGGGACCGGCC +
Preference number: 5 (lower is better)
Translates to: VGSHSWHLSTSLPSS*QSYGWPVSRYWGPA
Trigger: GGCCGGTCCCCAGTACCTTGACACAGGCCATCCGTAACTTTGCCAAGAGCTTGGAAGGCTGGTTGACAAATGCCATGAGTGACTTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGGCGTGTTGGTCCCCGTaGGTAAGTAACAGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: HAAVQLQRLRVSMETNLVACWSP*VSNSLH
Trigger: GTGGAGACTGTTACTTACCAACGGGGACCAACACGC...CACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CAA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGACCAGCTGCAGGGCCTaGACGTCGTGCAGTGTGACG +
Preference number: 5 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPETSCRA*TSCSVT
Trigger: CGTCACACTGCACGACGTCAAGGCCCTGCAGCTGGT...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGAGTCACTCATGGCATTaGTCAACCAGCCTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: PAEEGLSRIRNPWSGGALSHSWH*STSLPS
Trigger: GCTTGGAAGGCTGGTTGACAAATGCCATGAGTGACT...CAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CACGCAGCTGTCCAACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGGGTCTGGATGACCTGTaGTGGGAAGTCACTCATGGC +
Preference number: 5 (lower is better)
Translates to: HAAVQLQRLRVSMETNLVGLDDL*WEVTHG
Trigger: GCCATGAGTGACTTCCCACAACAGGTCATCCAGACC...CACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTTGGACAGCTGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAGGTCTGGATGACCTGTaGTGGGAAGTCACTCATGGC +
Preference number: 5 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRIGLDDL*WEVTHG
Trigger: GCCATGAGTGACTTCCCACAACAGGTCATCCAGACC...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp AAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGAGAGGCGAGATCGTaGAACTCTCCCATCACAGCG +
Preference number: 5 (lower is better)
Translates to: KGLGPKSRVPAEEGLSRIREARS*NSPITA
Trigger: CGCTGTGATGGGAGAGTTCAACGATCTCGCCTCTCT...TATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp TCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTCCCGGGAGCCCCCGCTaGAGTCAAAGTAAACATCAC +
Preference number: 5 (lower is better)
Translates to: SRVPAEEGLSRIRNPWSGPGSPR*SQSKHH
Trigger: GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGG...ACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCAACTGCTTTCCTTCTaGAACACTGACCCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: LGPKSRVPAEEGLSRIRNQLLSF*NTDPGS
Trigger: GCTCCCGGGGTCAGTGTTCAAGAAGGAAAGCAGTTG...GTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGCCAGCAGAGGAGGGTTaGTCCAGAATAAGGAACCCA +
Preference number: 5 (lower is better)
Translates to: QPFQLLKGLGPKSRVPAEPAEEG*SRIRNP
Trigger: TGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGG...CTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp TGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGGCTGAAAATTGGTTCCAGTaGAGTGCAGAGGCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: CSWFGDRTPARSCPTAAAENWFQ*SAEASA
Trigger: AGCACTGGCCTCTGCACTCAACTGGAACCAATTTTC...AGCCGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp CAGCCCTTTCAGCTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGTGACACTGACCCTGTaGGACAAACTCCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: QPFQLLKGLGPKSRVPAEVTLTL*DKLLPQ
Trigger: CTGTGGAAGGAGTTTGTCCAACAGGGTCAGTGTCAC...CTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAGCTGAAAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS GCA 90 bp GGCAGGAAGTCTCAGCTCCTCATTCCATGGCCTTCTCCACAGAATTaGTTGAGTGTCTTCACGGCATGGTTGCCAGTCACCCCTACATCG +
Preference number: 5 (lower is better)
Translates to: GRKSQLLIPWPSPQN*LSVFTAWLPVTPTS
Trigger: CGATGTAGGGGTGACTGGCAACCATGCCGTGAAGACACTCAAGCAATTCTGTGGAGAAGGCCATGGAATGAGGAGCTGAGACTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS-3UTR CAA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACGCGTGTTGGTCCCCGTaGGTAAGTAACAGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHACWSP*VSNSLH
Trigger: GTGGAGACTGTTACTTACCAACGGGGACCAACACGC...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000592546.5
CDS-3UTR CAA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGCAGCCTTCCAAGCTCTaGGCAAAGTTACGGATGGCC +
Preference number: 5 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMQPSKL*AKLRMA
Trigger: GGCCATCCGTAACTTTGCCAAGAGCTTGGAAGGCTG...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACCAGCCTTCCAAGCTCTaGGCAAAGTTACGGATGGCC +
Preference number: 5 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHQPSKL*AKLRMA
Trigger: GGCCATCCGTAACTTTGCCAAGAGCTTGGAAGGCTG...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp AGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTCTGGTGGGGCCCTGGTAGTCACTCATGGCATTaGTCAACCAGCCTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: SRGGFVQNKEPMVWWGPGSHSWH*STSLPS
Trigger: GCTTGGAAGGCTGGTTGACAAATGCCATGAGTGACT...ACCAGGGCCCCACCAGACCATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCCTGACGACGCCCACCTaGGTCTGGATGACCTGTTGT +
Preference number: 5 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHILTTPT*VWMTCC
Trigger: ACAACAGGTCATCCAGACCAAGGTGGGCGTCGTCAG...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp AGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGTCGCCCATGTCATCTTaGTCGAGCAGCGTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: SGYVFPWRQTWCLKFRASSPMSS*SSSVSD
Trigger: GTCGCTGACGCTGCTCGACAAAGATGACATGGGCGA...CGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCTCGCCCATGTCATCTTaGTCGAGCAGCGTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHISPMSS*SSSVSD
Trigger: GTCGCTGACGCTGCTCGACAAAGATGACATGGGCGA...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp GCCAGTGGGAGCCCTGGCCTGGGCTTCTGTAGCTTCAACAACTGCTTTCCTTCTCTAAGAGGCACTAATTaGGTGGAGCCGGTGAAATCC +
Preference number: 5 (lower is better)
Translates to: ASGSPGLGFCSFNNCFPSLRGTN*VEPVKS
Trigger: GGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAG...AGAAGGAAAGCAGTTGTTGAAGCTACAGAAGCCCAGGCCAGGGCTCCCACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS-3UTR CAA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCCTTTCTTCTCTGCAGTaGGTTTGGGGACAGAACTCC +
Preference number: 5 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSLSSLQ*VWGQNS
Trigger: GGAGTTCTGTCCCCAAACCAACTGCAGAGAAGAAAG...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS GCA 90 bp ATATGGCAGCCACTGGCCACTATGTGGTCTGTCCAAACCAAGATGTaGTACATCGAGTACCACCAGCAGTGTCTCGGCGTCGAGAAGTCT +
Preference number: 5 (lower is better)
Translates to: IWQPLATMWSVQTKM*YIEYHQQCLGVEKS
Trigger: AGACTTCTCGACGCCGAGACACTGCTGGTGGTACTCGATGTAGCACATCTTGGTTTGGACAGACCACATAGTGGCCAGTGGCTGCCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589641.1
CDS CCA 90 bp ATTCCATGGCCTTCTCCACAGAATTGCTTGAGTGTCTTCACGGCATaGTTGCCAGTCACCCCTACATCGAGTACCACCAGCAGTGTCTCG +
Preference number: 5 (lower is better)
Translates to: IPWPSPQNCLSVFTA*LPVTPTSSTTSSVS
Trigger: CGAGACACTGCTGGTGGTACTCGATGTAGGGGTGACTGGCAACCATGCCGTGAAGACACTCAAGCAATTCTGTGGAGAAGGCCATGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS CCA 90 bp AATCCGCTCCACCCTCGGAATTCTGCATGCTCAGGTCTAGATGACTaGTTGTTGGCAGGAAGTCTCAGCTCCTCATTCCATGGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: NPLHPRNSACSGLDD*LLAGSLSSSFHGLL
Trigger: GAGAAGGCCATGGAATGAGGAGCTGAGACTTCCTGCCAACAACCAGTCATCTAGACCTGAGCATGCAGAATTCCGAGGGTGGAGCGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS-3UTR CAA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCCACTGGAGATGGCTGTaGAGTAAACCGCTTTTGTGT +
Preference number: 5 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSHWRWL*SKPLLC
Trigger: ACACAAAAGCGGTTTACTCAACAGCCATCTCCAGTG...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATGGTGACGGTGAACTaGGACAGAGTCCCACATCCT +
Preference number: 5 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHMVTVN*DRVPHP
Trigger: AGGATGTGGGACTCTGTCCAAGTTCACCGTCACCAT...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCTCCACAGCCAGTGGCTaGATGGTGACGGTGAACTTG +
Preference number: 5 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHISTASG*MVTVNL
Trigger: CAAGTTCACCGTCACCATCAAGCCACTGGCTGTGGA...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp GCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACCCATGGTGACACTGACCCTGTaGGACAAACTCCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: AKVQGSSRGGFVQNKEPMVTLTL*DKLLPQ
Trigger: CTGTGGAAGGAGTTTGTCCAACAGGGTCAGTGTCAC...CATGGGTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp CTCTTAAAGGGACTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAAGAGTTTTGACTTaGAAGAGGTCCAGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: LLKGLGPKSRVPAEEGLSRRVLT*KRSRWD
Trigger: GTCCCACCTGGACCTCTTCAAAGTCAAAACTCTTCT...GGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAGTCCCTTTAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp CTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGCGAGAAACCAGCTTGTATaGGTTACCAGGAGTGAGGAA +
Preference number: 5 (lower is better)
Translates to: LCSWFGDRTPARSCPTAARNQLV*VTRSEE
Trigger: TTCCTCACTCCTGGTAACCAATACAAGCTGGTTTCT...CGCTGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS TCA 90 bp GGAAGTCTCAGCTCCTCATTCCATGGCCTTCTCCACAGAATTGCTTaGGTGTCTTCACGGCATGGTTGCCAGTCACCCCTACATCGAGTA +
Preference number: 5 (lower is better)
Translates to: GSLSSSFHGLLHRIA*VSSRHGCQSPLHRV
Trigger: TACTCGATGTAGGGGTGACTGGCAACCATGCCGTGAAGACACTCAAGCAATTCTGTGGAGAAGGCCATGGAATGAGGAGCTGAGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS GCA 90 bp AGCTGTTCTGATGGTGAGATTCAGTTGCTTGGCTTTGCTGGGCTATaGATTCAGAGTCCAAGAGAGGGCTCCACTGTGTGGCAGGCAGAT +
Preference number: 5 (lower is better)
Translates to: SCSDGEIQLLGFAGL*IQSPREGSTVWQAD
Trigger: ATCTGCCTGCCACACAGTGGAGCCCTCTCTTGGACTCTGAATGCATAGCCCAGCAAAGCCAAGCAACTGAATCTCACCATCAGAACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CCA 90 bp CTCTTACACCAGTGCTGTCCAATATGGCAGCCACTGGCCACTATGTaGTCTGTCCAAACCAAGATGTGCTACATCGAGTACCACCAGCAG +
Preference number: 5 (lower is better)
Translates to: LLHQCCPIWQPLATM*SVQTKMCYIEYHQQ
Trigger: CTGCTGGTGGTACTCGATGTAGCACATCTTGGTTTGGACAGACCACATAGTGGCCAGTGGCTGCCATATTGGACAGCACTGGTGTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589641.1
CDS-3UTR CAA 90 bp TCCTTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACGAAAATTGGTTCCAGTaGAGTGCAGAGGCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SFLNTDPGSPRLSQSKHHENWFQ*SAEASA
Trigger: AGCACTGGCCTCTGCACTCAACTGGAACCAATTTTC...GTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGTGCCCCTCAAGTCCTTaGGCATCTGGAGATGGGTTC +
Preference number: 5 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPECPSSP*ASGDGF
Trigger: GAACCCATCTCCAGATGCCAAAGGACTTGAGGGGCA...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAAAGGCAGAAACCAGCTaGTATTGGTTACCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: LLCSWFGDRTPARSCPTAKAETS*YWLPGV
Trigger: CACTCCTGGTAACCAATACAAGCTGGTTTCTGCCTT...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS TCA 90 bp TGGAGTCAGGGTTTGACTCTGGGACACTTGCTGAATCCAGTTTTCTaGGTTCTGTCGTTGGACCCAAGGAAGTCTGCAACCTCCCTACTC +
Preference number: 5 (lower is better)
Translates to: WSQGLTLGHLLNPVF*VLSLDPRKSATSLL
Trigger: GAGTAGGGAGGTTGCAGACTTCCTTGGGTCCAACGACAGAACTCAGAAAACTGGATTCAGCAAGTGTCCCAGAGTCAAACCCTGACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589712.1
CDS CCA 90 bp AGAGCAGCCAGAGATGATCTCCCTGGGATATCCAACAATCCTGCTTaGCCCAAGACTAAGGGGTTTCCCAGGATATGGGAATTTCAGTGC +
Preference number: 5 (lower is better)
Translates to: RAARDDLPGISNNPA*PKTKGFPRIWEFQC
Trigger: GCACTGAAATTCCCATATCCTGGGAAACCCCTTAGTCTTGGGCCAAGCAGGATTGTTGGATATCCCAGGGAGATCATCTCTGGCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592473.5
CDS-3UTR CAA 90 bp CTTCTCTGCAGTTGGTTTGGGGACAGAACTCCAGCACGCAGCTGTCCAACTGCAGAAAGTCCCGAATATTaGTTTGTCCCGAGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: LLCSWFGDRTPARSCPTAESPEY*FVPREE
Trigger: CTCTTCTCTCGGGACAAACAAATATTCGGGACTTTC...TGCAGTTGGACAGCTGCGTGCTGGAGTTCTGTCCCCAAACCAACTGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp TTCTTGAACACTGACCCCGGGAGCCCCCGCTTGAGTCAAAGTAAACATCACATCCTTTCTTCTCTGCAGTaGGTTTGGGGACAGAACTCC +
Preference number: 5 (lower is better)
Translates to: FLNTDPGSPRLSQSKHHILSSLQ*VWGQNS
Trigger: GGAGTTCTGTCCCCAAACCAACTGCAGAGAAGAAAG...GATGTGATGTTTACTTTGACTCAAGCGGGGGCTCCCGGGGTCAGTGTTCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS CCA 90 bp ATGGGGATAGGGGTATGGTTTGAGATGATGATATCCCTCCTCCATTaGGTGCACAGTCCACATCAGGCACAGAATGCACCATGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: MGIGVWFEMMISLLH*VHSPHQAQNAPCSS
Trigger: TGAAGAGCATGGTGCATTCTGTGCCTGATGTGGACTGTGCACCCAATGGAGGAGGGATATCATCATCTCAAACCATACCCCTATCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS-3UTR CAA 90 bp CTGGGGCCAAAGTCCAGGGTTCCAGCAGAGGAGGGTTTGTCCAGAATAAGGAACGTCCCGAATATTTGTTaGTCCCGAGAGAAGAGTTTT +
Preference number: 5 (lower is better)
Translates to: LGPKSRVPAEEGLSRIRNVPNIC*SREKSF
Trigger: AAAACTCTTCTCTCGGGACAAACAAATATTCGGGAC...GTTCCTTATTCTGGACAAACCCTCCTCTGCTGGAACCCTGGACTTTGGCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS TCA 90 bp ACACACACACACACACACACACACACTCTTAGTTGCAGTGGATTCTaGGTAGCAGGCTTCAACTCATGCTGTCTCTACTCTACCAGGGTC +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTLSCSGF*VAGFNSCCLYSTRV
Trigger: GACCCTGGTAGAGTAGAGACAGCATGAGTTGAAGCCTGCTACTCAGAATCCACTGCAACTAAGAGTGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CCA 90 bp AGAGTCCAAGAGAGGGCTCCACTGTGTGGCAGGCAGATCTGTGACTaGAACTGCAGAAAACACACACATACACACATACATACACACACA +
Preference number: 5 (lower is better)
Translates to: RVQERAPLCGRQICD*NCRKHTHTHIHTHT
Trigger: TGTGTGTGTATGTATGTGTGTATGTGTGTGTTTTCTGCAGTTCCAGTCACAGATCTGCCTGCCACACAGTGGAGCCCTCTCTTGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS-3UTR CAA 90 bp AACTGCAGCGGCTACGTGTTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGCACTGGAGATGGCTGTaGAGTAAACCGCTTTTGTGT +
Preference number: 5 (lower is better)
Translates to: NCSGYVFPWRQTWCLKFRHWRWL*SKPLLC
Trigger: ACACAAAAGCGGTTTACTCAACAGCCATCTCCAGTG...CCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAACACGTAGCCGCTGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp AGAGAAAACTATTGCATTTCGTTAGAAATCGCGTCCTGGGCCGAGGCTCGTCTTCTAAGAGGCACTAATTaGGTGGAGCCGGTGAAATCC +
Preference number: 5 (lower is better)
Translates to: RENYCISLEIASWAEARLLRGTN*VEPVKS
Trigger: GGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAG...AAGACGAGCCTCGGCCCAGGACGCGATTTCTAACGAAATGCAATAGTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS TCA 90 bp ATTCAGAGTCCAAGAGAGGGCTCCACTGTGTGGCAGGCAGATCTGTaGCTGGAACTGCAGAAAACACACACATACACACATACATACACA +
Preference number: 5 (lower is better)
Translates to: IQSPREGSTVWQADL*LELQKTHTYTHTYT
Trigger: TGTGTATGTATGTGTGTATGTGTGTGTTTTCTGCAGTTCCAGTCACAGATCTGCCTGCCACACAGTGGAGCCCTCTCTTGGACTCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS TCA 90 bp GCACCATGCTCTTCACCTTCCAGCTCACAGAATCCTCACCACAGCTaGAGGATCACATGGAAGTTTTATCATCCCCATACAGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: APCSSPSSSQNPHHS*RITWKFYHPHTDGK
Trigger: TTTGCCATCTGTATGGGGATGATAAAACTTCCATGTGATCCTTCAGCTGTGGTGAGGATTCTGTGAGCTGGAAGGTGAAGAGCATGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CCA 90 bp TGTGGTCTGTCCAAACCAAGATGTGCTGTAATACATAAAACACACTaGGATCGAGTACCACCAGCAGTGTCTCGGCGTCGAGAAGTCTTT +
Preference number: 5 (lower is better)
Translates to: CGLSKPRCAVIHKTH*DRVPPAVSRRREVF
Trigger: AAAGACTTCTCGACGCCGAGACACTGCTGGTGGTACTCGATCCCAGTGTGTTTTATGTATTACAGCACATCTTGGTTTGGACAGACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CCA 90 bp CTCTACTCTACCAGGGTCATGGTAGGGTGTGTAAACTCCTTCAGCTaGCCACCAATGTTGTTAGCTGTGCTTCCTGCCTTTTCTATTTGT +
Preference number: 5 (lower is better)
Translates to: LYSTRVMVGCVNSFS*PPMLLAVLPAFSIC
Trigger: ACAAATAGAAAAGGCAGGAAGCACAGCTAACAACATTGGTGGCCAGCTGAAGGAGTTTACACACCCTACCATGACCCTGGTAGAGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS-3UTR CAA 90 bp GACAAACAGTGTGATTATTCCCAGCTTTTCGTTTCTAAAGTGAGCACGCGTCTTCAACTGCTTTCCTTCTaGAACACTGACCCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: DKQCDYSQLFVSKVSTRLQLLSF*NTDPGS
Trigger: GCTCCCGGGGTCAGTGTTCAAGAAGGAAAGCAGTTG...AAGACGCGTGCTCACTTTAGAAACGAAAAGCTGGGAATAATCACACTGTTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CAA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGGAAAGTCCCGAATATTaGTTTGTCCCGAGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPEESPEY*FVPREE
Trigger: CTCTTCTCTCGGGACAAACAAATATTCGGGACTTTC...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS CCA 90 bp GCCACGAGGGATTTTAAGGAAATAGCCCAAATGTCTAGCAAACAGTaGAGTCAGGGTTTGACTCTGGGACACTTGCTGAATCCAGTTTTC +
Preference number: 5 (lower is better)
Translates to: ATRDFKEIAQMSSKQ*SQGLTLGHLLNPVF
Trigger: GAAAACTGGATTCAGCAAGTGTCCCAGAGTCAAACCCTGACTCCACTGTTTGCTAGACATTTGGGCTATTTCCTTAAAATCCCTCGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589712.1
CDS-3UTR CAA 90 bp CATCATCTAAGAGGCACTAATTTGGTGGAGCCGGTGAAATCCAGGTTCCCAGAGGATTCCTTCGCTTTTTaGGAGGTTTTCAATCGCCAT +
Preference number: 5 (lower is better)
Translates to: HHLRGTNLVEPVKSRFPEDSFAF*EVFNRH
Trigger: ATGGCGATTGAAAACCTCCAAAAAAGCGAAGGAATC...CTCTGGGAACCTGGATTTCACCGGCTCCACCAAATTAGTGCCTCTTAGATGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS-3UTR CAA 90 bp GACAAACAGTGTGATTATTCCCAGCTTTTCGTTTCTAAAGTGAGCACGCGTCTTCCCGAGAGAAGAGTTTaGACTTTGAAGAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: DKQCDYSQLFVSKVSTRLPERRV*TLKRSR
Trigger: CCTGGACCTCTTCAAAGTCAAAACTCTTCTCTCGGG...AAGACGCGTGCTCACTTTAGAAACGAAAAGCTGGGAATAATCACACTGTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS-3UTR CAA 90 bp TTTCCATGGAGACAAACTTGGTGTCTCAAGTTCAGGGCTTCGAAAGTCCCGAATTTGAGTAAACCGCTTTaGTGTGATGTGATTCCTTCG +
Preference number: 5 (lower is better)
Translates to: FPWRQTWCLKFRASKVPNLSKPL*CDVIPS
Trigger: CGAAGGAATCACATCACACAAAAGCGGTTTACTCAA...ATTCGGGACTTTCGAAGCCCTGAACTTGAGACACCAAGTTTGTCTCCATGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303657.10
ENST00000359161.7
CDS CCA 90 bp GTTAACTGGTTTAACCCTTCCACACCTTCATTTGTTGATGTCTTGTaGGTGGGCCCAGCAGTTCAACGTACCACATTCATAATTCTTCAT +
Preference number: 5 (lower is better)
Translates to: VNWFNPSTPSFVDVL*VGPAVQRTTFIILH
Trigger: ATGAAGAATTATGAATGTGGTACGTTGAACTGCTGGGCCCACCCACAAGACATCAACAAATGAAGGTGTGGAAGGGTTAAACCAGTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587700.1
ENST00000589641.1
CDS TCA 90 bp CCGTCCAACAGAAGCAGCAGAAATCATGTTGTAAAAACTTGCTACTaGACTTTAACCTGGCATATGTGTGTGCACGCCGTAGCATTAATA +
Preference number: 5 (lower is better)
Translates to: PSNRSSRNHVVKTCY*TLTWHMCVHAVALI
Trigger: TATTAATGCTACGGCGTGCACACACATATGCCAGGTTAAAGTTCAGTAGCAAGTTTTTACAACATGATTTCTGCTGCTTCTGTTGGACGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588021.5
CDS-3UTR CAA 90 bp GACAAACAGTGTGATTATTCCCAGCTTTTCGTTTCTAAAGTGAGCACGCGTCTTGTCCCGAATATTTGTTaGTCCCGAGAGAAGAGTTTT +
Preference number: 5 (lower is better)
Translates to: DKQCDYSQLFVSKVSTRLVPNIC*SREKSF
Trigger: AAAACTCTTCTCTCGGGACAAACAAATATTCGGGAC...AAGACGCGTGCTCACTTTAGAAACGAAAAGCTGGGAATAATCACACTGTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303657.10
CDS CCA 72 bp CGGGGCTCCAGCTCCTCAGCGTCACCCGGGGACGCCTaGCCTGAGCGCTGGCGGTTCCCGGGAGGGACACGC +
Preference number: 6 (lower is better)
Translates to: RGSSSSASPGDA*PERWRFPGGTR
Trigger: GCGTGTCCCTCCCGGGAACCGCCAGCGCTCAGGCCAGGCGTCCCCGGGTGACGCTGAGGAGCTGGAGCCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588021.5
CDS TCA 72 bp CTCCAGCTCCTCAGCGTCACCCGGGGACGCCTGGCCTaGGCGCTGGCGGTTCCCGGGAGGGACACGCAGGAG +
Preference number: 6 (lower is better)
Translates to: LQLLSVTRGRLA*ALAVPGRDTQE
Trigger: CTCCTGCGTGTCCCTCCCGGGAACCGCCAGCGCTCAGGCCAGGCGTCCCCGGGTGACGCTGAGGAGCTGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588021.5
CDS GCA 72 bp CACTGCGCTCCCGCTTTACCAGGGGCTCACCCAGGCTaGGGGCGTCTGGGCCCGCCTCGCTGCCACGCTGCT +
Preference number: 6 (lower is better)
Translates to: HCAPALPGAHPG*GRLGPPRCHAA
Trigger: AGCAGCGTGGCAGCGAGGCGGGCCCAGACGCCCGCAGCCTGGGTGAGCCCCTGGTAAAGCGGGAGCGCAGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000590778.1
ENST00000592546.5
CDS CCA 72 bp TCCTCAGCGTCACCCGGGGACGCCTGGCCTGAGCGCTaGCGGTTCCCGGGAGGGACACGCAGGAGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: SSASPGDAWPER*RFPGGTRRSCL
Trigger: CAGGCAGCTCCTGCGTGTCCCTCCCGGGAACCGCCAGCGCTCAGGCCAGGCGTCCCCGGGTGACGCTGAGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588021.5
CDS CCA 72 bp CGGGGACGAGGCTGCCACGGTCACCTGGGCACCGCCTaGGGCCTCGAAGTAAGAAGCCGTGCTGCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: RGRGCHGHLGTA*GLEVRSRAAGG
Trigger: GCCCCCAGCAGCACGGCTTCTTACTTCGAGGCCCCAGGCGGTGCCCAGGTGACCGTGGCAGCCTCGTCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000586302.5
ENST00000586940.1
ENST00000592172.5
ENST00000592473.5
ENST00000592546.5
ENST00000592883.5
ENST00000593241.5
CDS CCA 72 bp CTGTGGGAGCCGCTGTCCCCGAGGCTGTCCGTCTTCTaGGCTGGCCGGTACCTGGTGCCCAGCCGCCGCGTT +
Preference number: 6 (lower is better)
Translates to: LWEPLSPRLSVF*AGRYLVPSRRV
Trigger: AACGCGGCGGCTGGGCACCAGGTACCGGCCAGCCCAGAAGACGGACAGCCTCGGGGACAGCGGCTCCCACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589742.5
CDS GCA 72 bp TGGAACCTCGAGGAGGCGCCGGCCGGGGCTGCTAGATaGCCTGCAGGGAGTGGTTGGGGTCACTGCGCTCCC +
Preference number: 6 (lower is better)
Translates to: WNLEEAPAGAAR*PAGSGWGHCAP
Trigger: GGGAGCGCAGTGACCCCAACCACTCCCTGCAGGGCATCTAGCAGCCCCGGCCGGCGCCTCCTCGAGGTTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS CCA 72 bp CATGGTGATGCCCACCATGCTGTGGGAGGGGACCGCTaGCGGGGACGAGGCTGCCACGGTCACCTGGGCACC +
Preference number: 6 (lower is better)
Translates to: HGDAHHAVGGDR*RGRGCHGHLGT
Trigger: GGTGCCCAGGTGACCGTGGCAGCCTCGTCCCCGCCAGCGGTCCCCTCCCACAGCATGGTGGGCATCACCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000586302.5
ENST00000586940.1
ENST00000592172.5
ENST00000592473.5
ENST00000592546.5
ENST00000592883.5
ENST00000593241.5
CDS GCA 72 bp TGGCTCTGCACGGCCATGGTCTGTTCCGGAGTGCTGTaGAGGCCGCTGTGGGAGCCGCTGTCCCCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: WLCTAMVCSGVL*RPLWEPLSPRL
Trigger: CAGCCTCGGGGACAGCGGCTCCCACAGCGGCCTGCACAGCACTCCGGAACAGACCATGGCCGTGCAGAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589742.5
ENST00000592337.1
ENST00000592546.5
CDS GCA 72 bp GGTGCTGGCTCTGCACGGCCATGGTCTGTTCCGGAGTaGTGTGCAGGCCGCTGTGGGAGCCGCTGTCCCCGA +
Preference number: 6 (lower is better)
Translates to: GAGSARPWSVPE*CAGRCGSRCPR
Trigger: TCGGGGACAGCGGCTCCCACAGCGGCCTGCACAGCACTCCGGAACAGACCATGGCCGTGCAGAGCCAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589742.5
ENST00000592337.1
ENST00000592546.5
CDS CCA 72 bp CTGTGGGAGCCGCTGTCCCCGAGGCTGTCCGTCTTCTaGGCTGGCCGGTACCTGGGCTTCTGGTGCATGGGC +
Preference number: 6 (lower is better)
Translates to: LWEPLSPRLSVF*AGRYLGFWCMG
Trigger: GCCCATGCACCAGAAGCCCAGGTACCGGCCAGCCCAGAAGACGGACAGCCTCGGGGACAGCGGCTCCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000586806.1
ENST00000588021.5
ENST00000592337.1
ENST00000592546.5
CDS GCA 72 bp TGCAGGGCCTTGACGTCGTGCAGTGTGACGCCGTCCTaGAGCAGGAAGCTGCCCAGGTCGGGCGCTGGGAAC +
Preference number: 6 (lower is better)
Translates to: CRALTSCSVTPS*SRKLPRSGAGN
Trigger: GTTCCCAGCGCCCGACCTGGGCAGCTTCCTGCTGCAGGACGGCGTCACACTGCACGACGTCAAGGCCCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589340.1
ENST00000589742.5
ENST00000592546.5
CDS GCA 72 bp AGGCTGCGGGCGTCTGGGCCCGCCTCGCTGCCACGCTaGTCATCGCCCATGTCATCTTTGTCGAGCAGCGTC +
Preference number: 6 (lower is better)
Translates to: RLRASGPASLPR*SSPMSSLSSSV
Trigger: GACGCTGCTCGACAAAGATGACATGGGCGATGAGCAGCGTGGCAGCGAGGCGGGCCCAGACGCCCGCAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000590778.1
ENST00000592546.5
CDS GCA 72 bp GCTCACCCAGGCTGCGGGCGTCTGGGCCCGCCTCGCTaGCACGCTGCTCATCGCCCATGTCATCTTTGTCGA +
Preference number: 6 (lower is better)
Translates to: AHPGCGRLGPPR*HAAHRPCHLCR
Trigger: TCGACAAAGATGACATGGGCGATGAGCAGCGTGGCAGCGAGGCGGGCCCAGACGCCCGCAGCCTGGGTGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000590778.1
ENST00000592546.5
CDS GCA 72 bp GGGGCGGTCACCTCGCAGTGCCGTCTGTACACCAGCTaGAGGGCCTTGACGTCGTGCAGTGTGACGCCGTCC +
Preference number: 6 (lower is better)
Translates to: GAVTSQCRLYTS*RALTSCSVTPS
Trigger: GGACGGCGTCACACTGCACGACGTCAAGGCCCTGCAGCTGGTGTACAGACGGCACTGCGAGGTGACCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588021.5
CDS GCA 72 bp GCTGCTAGATGCCCTGCAGGGAGTGGTTGGGGTCACTaGGCTCCCGCTTTACCAGGGGCTCACCCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: AARCPAGSGWGH*APALPGAHPGC
Trigger: GCAGCCTGGGTGAGCCCCTGGTAAAGCGGGAGCGCAGTGACCCCAACCACTCCCTGCAGGGCATCTAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000590778.1
ENST00000592546.5
CDS GCA 72 bp CGGCTGCATCTGGGCCCCTTTGGGATTGGAGCTGGCTaGCTGGACCAACACCCTCTGGAGTTCGGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: RLHLGPFGIGAG*LDQHPLEFGPG
Trigger: TCCCGGCCCGAACTCCAGAGGGTGTTGGTCCAGGCAGCCAGCTCCAATCCCAAAGGGGCCCAGATGCAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593241.5
CDS CCA 72 bp ATCCGCTCCACCCTCGGAATTCTGCATGCTCAGGTCTaGAGTTCGGGCCGGGAGTTCGGGCAGCGGCTCCCG +
Preference number: 6 (lower is better)
Translates to: IRSTLGILHAQV*SSGREFGQRLP
Trigger: CGGGAGCCGCTGCCCGAACTCCCGGCCCGAACTCCAGACCTGAGCATGCAGAATTCCGAGGGTGGAGCGGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303657.10
ENST00000586302.5
ENST00000586940.1
ENST00000592172.5
ENST00000592546.5
CDS CCA 72 bp AGATCGGCTGCATCTGGGCCCCTTTGGGATTGGAGCTaGCTGCCTGGACCAACACCCTCTGCGGGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: RSAASGPLWDWS*LPGPTPSAGRL
Trigger: CAGCCTCCCCGCAGAGGGTGTTGGTCCAGGCAGCCAGCTCCAATCCCAAAGGGGCCCAGATGCAGCCGATCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000586940.1
ENST00000587181.1
ENST00000592172.5
ENST00000592281.5
ENST00000592546.5
ENST00000592883.5
CDS CCA 72 bp CCTGCACACGGTAGACGGTGGTCTGACGTCACCAGCTaGCAGCAAGGAAGAGGCGCACAGGCCCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: PAHGRRWSDVTS*QQGRGAQALLL
Trigger: CAGCAGCAGGGCCTGTGCGCCTCTTCCTTGCTGCCAGCTGGTGACGTCAGACCACCGTCTACCGTGTGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592337.1
CDS GCA 72 bp ACGCTGGCGAATCCGCTCCACCCTCGGAATTCTGCATaGTCAGGTCTGGAGTTCGGGCCGGGAGTTCGGGCA +
Preference number: 6 (lower is better)
Translates to: TLANPLHPRNSA*SGLEFGPGVRA
Trigger: TGCCCGAACTCCCGGCCCGAACTCCAGACCTGAGCATGCAGAATTCCGAGGGTGGAGCGGATTCGCCAGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303657.10
ENST00000586302.5
ENST00000586940.1
ENST00000592172.5
ENST00000592546.5
CDS GCA 72 bp ACGGACGCTGGCGAATCCGCTCCACCCTCGGAATTCTaGATGCTCAGGTCTGGAGTTCGGGCCGGGAGTTCG +
Preference number: 6 (lower is better)
Translates to: TDAGESAPPSEF*MLRSGVRAGSS
Trigger: CGAACTCCCGGCCCGAACTCCAGACCTGAGCATGCAGAATTCCGAGGGTGGAGCGGATTCGCCAGCGTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303657.10
ENST00000586302.5
ENST00000586940.1
ENST00000592172.5
ENST00000592546.5
CDS CCA 72 bp GGTACCTGGGCTTCTGGTGCATGGGCTGCTGCCGCATaGCCATGTACTGCGTGTCCTCCTGCAGCCGGTTCA +
Preference number: 6 (lower is better)
Translates to: GTWASGAWAAAA*PCTACPPAAGS
Trigger: TGAACCGGCTGCAGGAGGACACGCAGTACATGGCCATGCGGCAGCAGCCCATGCACCAGAAGCCCAGGTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000586806.1
ENST00000588021.5
ENST00000592337.1
ENST00000592546.5
CDS CCA 72 bp CTATGTACTGCTGGTGGTGCTGGCTCTGCACGGCCATaGTCTGTTCCGGAGTGCTGTGCAGGCCGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: LCTAGGAGSARP*SVPECCAGRCG
Trigger: CCCACAGCGGCCTGCACAGCACTCCGGAACAGACCATGGCCGTGCAGAGCCAGCACCACCAGCAGTACATAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589742.5
ENST00000592337.1
ENST00000592546.5
CDS CCA 72 bp TGCATCTGGGCCCCTTTGGGATTGGAGCTGGCTGCCTaGACCAACACCCTCTGGAGTTCGGGCCGGGAGTTC +
Preference number: 6 (lower is better)
Translates to: CIWAPLGLELAA*TNTLWSSGREF
Trigger: GAACTCCCGGCCCGAACTCCAGAGGGTGTTGGTCCAGGCAGCCAGCTCCAATCCCAAAGGGGCCCAGATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593241.5
CDS CCA 72 bp AGATCGGCTGCATCTGGGCCCCTTTGGGATTGGAGCTaGCTGCCTGGACCAACACCCTCTGGAGTTCGGGCC +
Preference number: 6 (lower is better)
Translates to: RSAASGPLWDWS*LPGPTPSGVRA
Trigger: GGCCCGAACTCCAGAGGGTGTTGGTCCAGGCAGCCAGCTCCAATCCCAAAGGGGCCCAGATGCAGCCGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593241.5
CDS GCA 72 bp TCTACAGTTGCCTCGCAGTGCCGTCTGTACACCAGCTaGAGGGCCTTGACGTCGTGCAGTGTGACGCCGTCC +
Preference number: 6 (lower is better)
Translates to: STVASQCRLYTS*RALTSCSVTPS
Trigger: GGACGGCGTCACACTGCACGACGTCAAGGCCCTGCAGCTGGTGTACAGACGGCACTGCGAGGCAACTGTAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000589340.1
ENST00000589742.5
ENST00000592546.5
CDS CAA 72 bp GCGGCGGCGGCAGCGGCTGCTGCGTGTTGGTCCCCGTaGGTAAGTAACAGTCTCCACGGCTACAGTCTCTAT +
Preference number: 6 (lower is better)
Translates to: AAAAAAAACWSP*VSNSLHGYSLY
Trigger: ATAGAGACTGTAGCCGTGGAGACTGTTACTTACCAACGGGGACCAACACGCAGCAGCCGCTGCCGCCGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303657.10
ENST00000589742.5
ENST00000592546.5
ENST00000593241.5
CDS TCA 72 bp TCGCAGCTCCTCATCCACCTGAGGATGGGGTCGCACTaGCACAGGGAGATAAGCTTGTCCTTGGGCAGGACG +
Preference number: 6 (lower is better)
Translates to: SQLLIHLRMGSH*HREISLSLGRT
Trigger: CGTCCTGCCCAAGGACAAGCTTATCTCCCTGTGTCAGTGCGACCCCATCCTCAGGTGGATGAGGAGCTGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000589340.1
ENST00000592546.5
CDS GCA 72 bp TGGGAGACATCTATGTACTGCTGGTGGTGCTGGCTCTaGACGGCCATGGTCTGTTCCGGAGTGCTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: WETSMYCWWCWL*TAMVCSGVLCR
Trigger: CCTGCACAGCACTCCGGAACAGACCATGGCCGTGCAGAGCCAGCACCACCAGCAGTACATAGATGTCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589742.5
ENST00000592337.1
ENST00000592546.5
CDS GCA 72 bp GGGAAGACGTGGGAGACATCTATGTACTGCTGGTGGTaGTGGCTCTGCACGGCCATGGTCTGTTCCGGAGTG +
Preference number: 6 (lower is better)
Translates to: GKTWETSMYCWW*WLCTAMVCSGV
Trigger: CACTCCGGAACAGACCATGGCCGTGCAGAGCCAGCACCACCAGCAGTACATAGATGTCTCCCACGTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589742.5
ENST00000592337.1
ENST00000592546.5
CDS CCA 72 bp TCGGGGAAGACGTGGGAGACATCTATGTACTGCTGGTaGTGCTGGCTCTGCACGGCCATGGTCTGTTCCGGA +
Preference number: 6 (lower is better)
Translates to: SGKTWETSMYCW*CWLCTAMVCSG
Trigger: TCCGGAACAGACCATGGCCGTGCAGAGCCAGCACCACCAGCAGTACATAGATGTCTCCCACGTCTTCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589742.5
ENST00000592337.1
ENST00000592546.5
CDS CCA 72 bp AAGACGTGGGAGACATCTATGTACTGCTGGTGGTGCTaGCTCTGCACGGCCATGGTCTGTTCCGGAGTGCTG +
Preference number: 6 (lower is better)
Translates to: KTWETSMYCWWC*LCTAMVCSGVL
Trigger: CAGCACTCCGGAACAGACCATGGCCGTGCAGAGCCAGCACCACCAGCAGTACATAGATGTCTCCCACGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000588021.5
ENST00000589742.5
ENST00000592337.1
ENST00000592546.5
CDS CAA 90 bp CCATGGCCTTCTCCACAGAATTGCTTGAGTGTCTTCACGGCATGGTaGCCAGTCACCCCTACATCGAGTACCACCAGCAGTGTCTCGGCG +
Preference number: 6 (lower is better)
Translates to: PWPSPQNCLSVFTAW*PVTPTSSTTSSVSA
Trigger: CGCCGAGACACTGCTGGTGGTACTCGATGTAGGGGTGACTGGCAACCATGCCGTGAAGACACTCAAGCAATTCTGTGGAGAAGGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS TCA 72 bp TCTGCATGCTCAGGTTTGACCTTTTGGAGCCACTGCTaGGTCAAACGCGCCAGTGGGAACATCTCCCGTGGC +
Preference number: 6 (lower is better)
Translates to: SACSGLTFWSHC*VKRASGNISRG
Trigger: GCCACGGGAGATGTTCCCACTGGCGCGTTTGACTCAGCAGTGGCTCCAAAAGGTCAAACCTGAGCATGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592281.5
CDS GCA 72 bp ACCACGGTGGTTCTGCCTTCTCTCATTAGCTACCCTTaGTTCAAGCCAAGGAGGACGTCAGGGTCACCGTGG +
Preference number: 6 (lower is better)
Translates to: TTVVLPSLISYP*FKPRRTSGSPW
Trigger: CCACGGTGACCCTGACGTCCTCCTTGGCTTGAAGCAAGGGTAGCTAATGAGAGAAGGCAGAACCACCGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586940.1
CDS CCA 72 bp GAGGGTAACTGCTTCTCCCACGGCCTCCGACCACGGTaGTTCTGCCTTCTCTCATTAGCTACCCTTGCTTCA +
Preference number: 6 (lower is better)
Translates to: EGNCFSHGLRPR*FCLLSLATLAS
Trigger: TGAAGCAAGGGTAGCTAATGAGAGAAGGCAGAACCACCGTGGTCGGAGGCCGTGGGAGAAGCAGTTACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586940.1
CDS CAA 72 bp GGCACTGACGACGCCCACCTTGGTCTGGATGACCTGTaGTGGGAAGTCACTCATGGCATTTGTCAACCAGCC +
Preference number: 6 (lower is better)
Translates to: GTDDAHLGLDDL*WEVTHGICQPA
Trigger: GGCTGGTTGACAAATGCCATGAGTGACTTCCCACAACAGGTCATCCAGACCAAGGTGGGCGTCGTCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS TCA 72 bp AAAGTCCTGGGCTCAGGGAGCAGACAACTCCCAGTTTaGGACTTGATTCTGCCGTGCACTTGCTGGCTGACC +
Preference number: 6 (lower is better)
Translates to: KVLGSGSRQLPV*DLILPCTCWLT
Trigger: GGTCAGCCAGCAAGTGCACGGCAGAATCAAGTCTCAAACTGGGAGTTGTCTGCTCCCTGAGCCCAGGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS GCA 72 bp CCACTGGCCACTATGTGGTCTGTCCAAACCAAGATGTaGTACATCGAGTACCACCAGCAGTGTCTCGGCGTC +
Preference number: 6 (lower is better)
Translates to: PLATMWSVQTKM*YIEYHQQCLGV
Trigger: GACGCCGAGACACTGCTGGTGGTACTCGATGTAGCACATCTTGGTTTGGACAGACCACATAGTGGCCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589641.1
CDS GCA 72 bp AACTGCTTCTCCCACGGCCTCCGACCACGGTGGTTCTaGCTTCTCTCATTAGCTACCCTTGCTTCAAGCCAA +
Preference number: 6 (lower is better)
Translates to: NCFSHGLRPRWF*LLSLATLASSQ
Trigger: TTGGCTTGAAGCAAGGGTAGCTAATGAGAGAAGGCAGAACCACCGTGGTCGGAGGCCGTGGGAGAAGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586940.1
CDS GCA 72 bp ACGCTGGCGAATCCGCTCCACCCTCGGAATTCTGCATaGTCAGGTCTAGATGACTGGTTGTTGGCAGGAAGT +
Preference number: 6 (lower is better)
Translates to: TLANPLHPRNSA*SGLDDWLLAGS
Trigger: ACTTCCTGCCAACAACCAGTCATCTAGACCTGAGCATGCAGAATTCCGAGGGTGGAGCGGATTCGCCAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS CAA 72 bp GAAAGTCCTGGGCTCAGGGAGCAGACAACTCCCAGTTaGAGACTTGATTCTGCCGTGCACTTGCTGGCTGAC +
Preference number: 6 (lower is better)
Translates to: ESPGLREQTTPS*RLDSAVHLLAD
Trigger: GTCAGCCAGCAAGTGCACGGCAGAATCAAGTCTCAAACTGGGAGTTGTCTGCTCCCTGAGCCCAGGACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CAA 90 bp TGTGGGAAGTCACTCATGGCATTTGTCAACCAGCCTTCCAAGCTCTaGGCAAAGTTACGGATGGCCTGTGTCAAGGTACTGGGGACCGGC +
Preference number: 6 (lower is better)
Translates to: CGKSLMAFVNQPSKL*AKLRMACVKVLGTG
Trigger: GCCGGTCCCCAGTACCTTGACACAGGCCATCCGTAACTTTGCCAAGAGCTTGGAAGGCTGGTTGACAAATGCCATGAGTGACTTCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS CAA 90 bp AGGGAGCAGACAACTCCCAGTTTGAGACTTGATTCTGCCGTGCACTaGCTGGCTGACCTCAGAGGAACTGGTCCTCTCTATGCCCCAGTT +
Preference number: 6 (lower is better)
Translates to: REQTTPSLRLDSAVH*LADLRGTGPLYAPV
Trigger: AACTGGGGCATAGAGAGGACCAGTTCCTCTGAGGTCAGCCAGCAAGTGCACGGCAGAATCAAGTCTCAAACTGGGAGTTGTCTGCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CCA 72 bp ACTGACGACGCCCACCTTGGTCTGGATGACCTGTTGTaGGAAGTCACTCATGGCATTTGTCAACCAGCCTTC +
Preference number: 6 (lower is better)
Translates to: TDDAHLGLDDLL*EVTHGICQPAF
Trigger: GAAGGCTGGTTGACAAATGCCATGAGTGACTTCCCACAACAGGTCATCCAGACCAAGGTGGGCGTCGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS CCA 72 bp GAGAGATGGACCCTCTTACACCAGTGCTGTCCAATATaGCAGCCACTGGCCACTATGTGGTCTGTCCAAACC +
Preference number: 6 (lower is better)
Translates to: ERWTLLHQCCPI*QPLATMWSVQT
Trigger: GGTTTGGACAGACCACATAGTGGCCAGTGGCTGCCATATTGGACAGCACTGGTGTAAGAGGGTCCATCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587700.1
ENST00000589523.1
ENST00000589641.1
CDS CCA 72 bp CCTTCTCCACAGAATTGCTTGAGTGTCTTCACGGCATaGTTGCCAGTCACCCCTACATCGAGTACCACCAGC +
Preference number: 6 (lower is better)
Translates to: PSPQNCLSVFTA*LPVTPTSSTTS
Trigger: GCTGGTGGTACTCGATGTAGGGGTGACTGGCAACCATGCCGTGAAGACACTCAAGCAATTCTGTGGAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS CAA 72 bp CAGCTCCTCATTCCATGGCCTTCTCCACAGAATTGCTaGAGTGTCTTCACGGCATGGTTGCCAGTCACCCCT +
Preference number: 6 (lower is better)
Translates to: QLLIPWPSPQNC*SVFTAWLPVTP
Trigger: AGGGGTGACTGGCAACCATGCCGTGAAGACACTCAAGCAATTCTGTGGAGAAGGCCATGGAATGAGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS CAA 90 bp TGGCAGGAAGTCTCAGCTCCTCATTCCATGGCCTTCTCCACAGAATaGCTTGAGTGTCTTCACGGCATGGTTGCCAGTCACCCCTACATC +
Preference number: 6 (lower is better)
Translates to: WQEVSAPHSMAFSTE*LECLHGMVASHPYI
Trigger: GATGTAGGGGTGACTGGCAACCATGCCGTGAAGACACTCAAGCAATTCTGTGGAGAAGGCCATGGAATGAGGAGCTGAGACTTCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS GCA 72 bp TCTCAGCTCCTCATTCCATGGCCTTCTCCACAGAATTaGTTGAGTGTCTTCACGGCATGGTTGCCAGTCACC +
Preference number: 6 (lower is better)
Translates to: SQLLIPWPSPQN*LSVFTAWLPVT
Trigger: GGTGACTGGCAACCATGCCGTGAAGACACTCAAGCAATTCTGTGGAGAAGGCCATGGAATGAGGAGCTGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS CAA 72 bp TCTCCACAGAATTGCTTGAGTGTCTTCACGGCATGGTaGCCAGTCACCCCTACATCGAGTACCACCAGCAGT +
Preference number: 6 (lower is better)
Translates to: SPQNCLSVFTAW*PVTPTSSTTSS
Trigger: ACTGCTGGTGGTACTCGATGTAGGGGTGACTGGCAACCATGCCGTGAAGACACTCAAGCAATTCTGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS CAA 72 bp GTCTCAGCTCCTCATTCCATGGCCTTCTCCACAGAATaGCTTGAGTGTCTTCACGGCATGGTTGCCAGTCAC +
Preference number: 6 (lower is better)
Translates to: VSAPHSMAFSTE*LECLHGMVASH
Trigger: GTGACTGGCAACCATGCCGTGAAGACACTCAAGCAATTCTGTGGAGAAGGCCATGGAATGAGGAGCTGAGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS CAA 90 bp GGGAATTTCAGTGCTAAAACCGGGAAATCCCCAAAGCGGGAAGAGTaGGTCACCCTGGGTCTCTCTAAGGAGCTGACATTTGAGGCAACG +
Preference number: 6 (lower is better)
Translates to: GNFSAKTGKSPKREE*VTLGLSKELTFEAT
Trigger: CGTTGCCTCAAATGTCAGCTCCTTAGAGAGACCCAGGGTGACCAACTCTTCCCGCTTTGGGGATTTCCCGGTTTTAGCACTGAAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592473.5
CDS CAA 90 bp GAGCTGCTCTCAGCTGTTCTGATGGTGAGATTCAGTTGCTTGGCTTaGCTGGGCTATGCATTCAGAGTCCAAGAGAGGGCTCCACTGTGT +
Preference number: 6 (lower is better)
Translates to: ELLSAVLMVRFSCLA*LGYAFRVQERAPLC
Trigger: ACACAGTGGAGCCCTCTCTTGGACTCTGAATGCATAGCCCAGCAAAGCCAAGCAACTGAATCTCACCATCAGAACAGCTGAGAGCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CAA 90 bp AGGAAGTCTCAGCTCCTCATTCCATGGCCTTCTCCACAGAATTGCTaGAGTGTCTTCACGGCATGGTTGCCAGTCACCCCTACATCGAGT +
Preference number: 6 (lower is better)
Translates to: RKSQLLIPWPSPQNC*SVFTAWLPVTPTSS
Trigger: ACTCGATGTAGGGGTGACTGGCAACCATGCCGTGAAGACACTCAAGCAATTCTGTGGAGAAGGCCATGGAATGAGGAGCTGAGACTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS CAA 90 bp TTGATGGAGCTGCTCTCAGCTGTTCTGATGGTGAGATTCAGTTGCTaGGCTTTGCTGGGCTATGCATTCAGAGTCCAAGAGAGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: LMELLSAVLMVRFSC*ALLGYAFRVQERAP
Trigger: TGGAGCCCTCTCTTGGACTCTGAATGCATAGCCCAGCAAAGCCAAGCAACTGAATCTCACCATCAGAACAGCTGAGAGCAGCTCCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CAA 90 bp TGCTTTGATGGAGCTGCTCTCAGCTGTTCTGATGGTGAGATTCAGTaGCTTGGCTTTGCTGGGCTATGCATTCAGAGTCCAAGAGAGGGC +
Preference number: 6 (lower is better)
Translates to: CFDGAALSCSDGEIQ*LGFAGLCIQSPREG
Trigger: GCCCTCTCTTGGACTCTGAATGCATAGCCCAGCAAAGCCAAGCAACTGAATCTCACCATCAGAACAGCTGAGAGCAGCTCCATCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS TCA 72 bp GGGAAGAGTTGGTCACCCTGGGTCTCTCTAAGGAGCTaGCATTTGAGGCAACGTTGGAGTAACGAGGAACAA +
Preference number: 6 (lower is better)
Translates to: GKSWSPWVSLRS*HLRQRWSNEEQ
Trigger: TTGTTCCTCGTTACTCCAACGTTGCCTCAAATGTCAGCTCCTTAGAGAGACCCAGGGTGACCAACTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592473.5
CDS TCA 72 bp CCAAGAGAGGGCTCCACTGTGTGGCAGGCAGATCTGTaGCTGGAACTGCAGAAAACACACACATACACACAT +
Preference number: 6 (lower is better)
Translates to: PREGSTVWQADL*LELQKTHTYTH
Trigger: ATGTGTGTATGTGTGTGTTTTCTGCAGTTCCAGTCACAGATCTGCCTGCCACACAGTGGAGCCCTCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS TCA 72 bp TATCATCCCCATACAGATGGCAAAAGTTACACACCCTaGAAGTCAATGGCACAGCCAGCCACCCAGCCTAGC +
Preference number: 6 (lower is better)
Translates to: YHPHTDGKSYTP*KSMAQPATQPS
Trigger: GCTAGGCTGGGTGGCTGGCTGTGCCATTGACTTTCAGGGTGTGTAACTTTTGCCATCTGTATGGGGATGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CCA 72 bp CACTCATGGCATTTGTCAACCAGCCTTCCAAGCTCTTaGCAAAGTTACGGATGGCCTGTGTCAAGGTACTGG +
Preference number: 6 (lower is better)
Translates to: HSWHLSTSLPSS*QSYGWPVSRYW
Trigger: CCAGTACCTTGACACAGGCCATCCGTAACTTTGCCAAGAGCTTGGAAGGCTGGTTGACAAATGCCATGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS CCA 72 bp ACCAGGGTCATGGTAGGGTGTGTAAACTCCTTCAGCTaGCCACCAATGTTGTTAGCTGTGCTTCCTGCCTTT +
Preference number: 6 (lower is better)
Translates to: TRVMVGCVNSFS*PPMLLAVLPAF
Trigger: AAAGGCAGGAAGCACAGCTAACAACATTGGTGGCCAGCTGAAGGAGTTTACACACCCTACCATGACCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CCA 72 bp GGGGTATGGTTTGAGATGATGATATCCCTCCTCCATTaGGTGCACAGTCCACATCAGGCACAGAATGCACCA +
Preference number: 6 (lower is better)
Translates to: GVWFEMMISLLH*VHSPHQAQNAP
Trigger: TGGTGCATTCTGTGCCTGATGTGGACTGTGCACCCAATGGAGGAGGGATATCATCATCTCAAACCATACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CCA 72 bp CTGGTTGTTGGCAGGAAGTCTCAGCTCCTCATTCCATaGCCTTCTCCACAGAATTGCTTGAGTGTCTTCACG +
Preference number: 6 (lower is better)
Translates to: LVVGRKSQLLIP*PSPQNCLSVFT
Trigger: CGTGAAGACACTCAAGCAATTCTGTGGAGAAGGCCATGGAATGAGGAGCTGAGACTTCCTGCCAACAACCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592883.5
CDS CAA 72 bp AGTGCTAAAACCGGGAAATCCCCAAAGCGGGAAGAGTaGGTCACCCTGGGTCTCTCTAAGGAGCTGACATTT +
Preference number: 6 (lower is better)
Translates to: SAKTGKSPKREE*VTLGLSKELTF
Trigger: AAATGTCAGCTCCTTAGAGAGACCCAGGGTGACCAACTCTTCCCGCTTTGGGGATTTCCCGGTTTTAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592473.5
CDS CAA 72 bp GGAGCTGCTCTCAGCTGTTCTGATGGTGAGATTCAGTaGCTTGGCTTTGCTGGGCTATGCATTCAGAGTCCA +
Preference number: 6 (lower is better)
Translates to: GAALSCSDGEIQ*LGFAGLCIQSP
Trigger: TGGACTCTGAATGCATAGCCCAGCAAAGCCAAGCAACTGAATCTCACCATCAGAACAGCTGAGAGCAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CAA 72 bp ACAACTCCCAGTTTGAGACTTGATTCTGCCGTGCACTaGCTGGCTGACCTCAGAGGAACTGGTCCTCTCTAT +
Preference number: 6 (lower is better)
Translates to: TTPSLRLDSAVH*LADLRGTGPLY
Trigger: ATAGAGAGGACCAGTTCCTCTGAGGTCAGCCAGCAAGTGCACGGCAGAATCAAGTCTCAAACTGGGAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS TCA 72 bp GGTTTGACTCTGGGACACTTGCTGAATCCAGTTTTCTaGGTTCTGTCGTTGGACCCAAGGAAGTCTGCAACC +
Preference number: 6 (lower is better)
Translates to: GLTLGHLLNPVF*VLSLDPRKSAT
Trigger: GGTTGCAGACTTCCTTGGGTCCAACGACAGAACTCAGAAAACTGGATTCAGCAAGTGTCCCAGAGTCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589712.1
CDS GCA 72 bp ATGTGTGTGCACGCCGTAGCATTAATATGCAGCCACTaGATCCATTCCAGTGTCAGCCAAGCCAGCATCATA +
Preference number: 6 (lower is better)
Translates to: MCVHAVALICSH*IHSSVSQASII
Trigger: TATGATGCTGGCTTGGCTGACACTGGAATGGATGCAGTGGCTGCATATTAATGCTACGGCGTGCACACACAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588021.5
CDS CCA 72 bp GAGAGGGCTCCACTGTGTGGCAGGCAGATCTGTGACTaGAACTGCAGAAAACACACACATACACACATACAT +
Preference number: 6 (lower is better)
Translates to: ERAPLCGRQICD*NCRKHTHTHIH
Trigger: ATGTATGTGTGTATGTGTGTGTTTTCTGCAGTTCCAGTCACAGATCTGCCTGCCACACAGTGGAGCCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CAA 72 bp TCACTCATGGCATTTGTCAACCAGCCTTCCAAGCTCTaGGCAAAGTTACGGATGGCCTGTGTCAAGGTACTG +
Preference number: 6 (lower is better)
Translates to: SLMAFVNQPSKL*AKLRMACVKVL
Trigger: CAGTACCTTGACACAGGCCATCCGTAACTTTGCCAAGAGCTTGGAAGGCTGGTTGACAAATGCCATGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303657.10
ENST00000359161.7
ENST00000592546.5
CDS CAA 72 bp TATTGTCTCACAGATCTGGAGGCTAAAAGTGTGAGATaGAGAGGCTGGCTGGCTTGGTTCCTTCTGAGGGCT +
Preference number: 6 (lower is better)
Translates to: YCLTDLEAKSVR*RGWLAWFLLRA
Trigger: AGCCCTCAGAAGGAACCAAGCCAGCCAGCCTCTCAATCTCACACTTTTAGCCTCCAGATCTGTGAGACAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587700.1
ENST00000589523.1
CDS CAA 72 bp CTGCTCTCAGCTGTTCTGATGGTGAGATTCAGTTGCTaGGCTTTGCTGGGCTATGCATTCAGAGTCCAAGAG +
Preference number: 6 (lower is better)
Translates to: LLSAVLMVRFSC*ALLGYAFRVQE
Trigger: CTCTTGGACTCTGAATGCATAGCCCAGCAAAGCCAAGCAACTGAATCTCACCATCAGAACAGCTGAGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CCA 72 bp TCCAAACCAAGATGTGCTGTAATACATAAAACACACTaGGATCGAGTACCACCAGCAGTGTCTCGGCGTCGA +
Preference number: 6 (lower is better)
Translates to: SKPRCAVIHKTH*DRVPPAVSRRR
Trigger: TCGACGCCGAGACACTGCTGGTGGTACTCGATCCCAGTGTGTTTTATGTATTACAGCACATCTTGGTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CCA 72 bp GGTCTTCTCATCTATAAGTTGAAAACACAGTCCTTGTaGGGTTGCTTGAGACACCCAGAGGGGCTTCAATGC +
Preference number: 6 (lower is better)
Translates to: GLLIYKLKTQSL*GCLRHPEGLQC
Trigger: GCATTGAAGCCCCTCTGGGTGTCTCAAGCAACCCCACAAGGACTGTGTTTTCAACTTATAGATGAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CAA 90 bp CGAGAGCCCGTCCAACAGAAGCAGCAGAAATCATGTTGTAAAAACTaGCTACTGAACTTTAACCTGGCATATGTGTGTGCACGCCGTAGC +
Preference number: 6 (lower is better)
Translates to: REPVQQKQQKSCCKN*LLNFNLAYVCARRS
Trigger: GCTACGGCGTGCACACACATATGCCAGGTTAAAGTTCAGTAGCAAGTTTTTACAACATGATTTCTGCTGCTTCTGTTGGACGGGCTCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588021.5
CDS CAA 90 bp CATGGGCAACTTGTTCTAATGCCACCAGCCAACCCATGTTTTAGTTaGCTGGGGCTACATTACAAAGTACCACAGACTGGAGGGCTTAAA +
Preference number: 6 (lower is better)
Translates to: HGQLVLMPPANPCFS*LGLHYKVPQTGGLK
Trigger: TTTAAGCCCTCCAGTCTGTGGTACTTTGTAATGTAGCCCCAGCAAACTAAAACATGGGTTGGCTGGTGGCATTAGAACAAGTTGCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587700.1
ENST00000589523.1
CDS TCA 72 bp CACACACACACACACACTCTTAGTTGCAGTGGATTCTaGGTAGCAGGCTTCAACTCATGCTGTCTCTACTCT +
Preference number: 6 (lower is better)
Translates to: HTHTHTLSCSGF*VAGFNSCCLYS
Trigger: AGAGTAGAGACAGCATGAGTTGAAGCCTGCTACTCAGAATCCACTGCAACTAAGAGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CCA 72 bp CTTCAATTGTCCTATAGGCTGCCTGTAACCTTTTCATaGGCAACTTGTTCTAATGCCACCAGCCAACCCATG +
Preference number: 6 (lower is better)
Translates to: LQLSYRLPVTFS*ATCSNATSQPM
Trigger: CATGGGTTGGCTGGTGGCATTAGAACAAGTTGCCCATGAAAAGGTTACAGGCAGCCTATAGGACAATTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CAA 90 bp AATGAGGTGTGTTGGCCCATTACACAGATAATAAGGGATGGAGGCTaGAACTTCCACTATCCACCGTTTATCCTCTCTTTTCCCCAAGAC +
Preference number: 6 (lower is better)
Translates to: NEVCWPITQIIRDGG*NFHYPPFILSFPQD
Trigger: GTCTTGGGGAAAAGAGAGGATAAACGGTGGATAGTGGAAGTTCAAGCCTCCATCCCTTATTATCTGTGTAATGGGCCAACACACCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CCA 72 bp TTTAACCCTTCCACACCTTCATTTGTTGATGTCTTGTaGGTGGGCCCAGCAGTTCAACGTACCACATTCATA +
Preference number: 6 (lower is better)
Translates to: FNPSTPSFVDVL*VGPAVQRTTFI
Trigger: TATGAATGTGGTACGTTGAACTGCTGGGCCCACCCACAAGACATCAACAAATGAAGGTGTGGAAGGGTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587700.1
ENST00000589641.1
CDS CAA 72 bp CTTGTTCTAATGCCACCAGCCAACCCATGTTTTAGTTaGCTGGGGCTACATTACAAAGTACCACAGACTGGA +
Preference number: 6 (lower is better)
Translates to: LVLMPPANPCFS*LGLHYKVPQTG
Trigger: TCCAGTCTGTGGTACTTTGTAATGTAGCCCCAGCAAACTAAAACATGGGTTGGCTGGTGGCATTAGAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587700.1
ENST00000589523.1
CDS TCA 72 bp AGTGGAGAAAGTTCTACTTGCCAGGAACTCAAGGAATaGGGTGTGTTGGCCCATTACACAGATAATAAGGGA +
Preference number: 6 (lower is better)
Translates to: SGESSTCQELKE*GVLAHYTDNKG
Trigger: TCCCTTATTATCTGTGTAATGGGCCAACACACCTCATTCCTTGAGTTCCTGGCAAGTAGAACTTTCTCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS CAA 90 bp AACGTTAACTGGTTTAACCCTTCCACACCTTCATTTGTTGATGTCTaGTGGGTGGGCCCAGCAGTTCAACGTACCACATTCATAATTCTT +
Preference number: 6 (lower is better)
Translates to: NVNWFNPSTPSFVDV*WVGPAVQRTTFIIL
Trigger: AAGAATTATGAATGTGGTACGTTGAACTGCTGGGCCCACCCACAAGACATCAACAAATGAAGGTGTGGAAGGGTTAAACCAGTTAACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587700.1
ENST00000589641.1
CDS CCA 72 bp GATTTTAAGGAAATAGCCCAAATGTCTAGCAAACAGTaGAGTCAGGGTTTGACTCTGGGACACTTGCTGAAT +
Preference number: 6 (lower is better)
Translates to: DFKEIAQMSSKQ*SQGLTLGHLLN
Trigger: ATTCAGCAAGTGTCCCAGAGTCAAACCCTGACTCCACTGTTTGCTAGACATTTGGGCTATTTCCTTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589712.1
CDS CAA 72 bp TGTTGGCCCATTACACAGATAATAAGGGATGGAGGCTaGAACTTCCACTATCCACCGTTTATCCTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: CWPITQIIRDGG*NFHYPPFILSF
Trigger: AAAAGAGAGGATAAACGGTGGATAGTGGAAGTTCAAGCCTCCATCCCTTATTATCTGTGTAATGGGCCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587700.1
CDS TCA 72 bp AGAAGCAGCAGAAATCATGTTGTAAAAACTTGCTACTaGACTTTAACCTGGCATATGTGTGTGCACGCCGTA +
Preference number: 6 (lower is better)
Translates to: RSSRNHVVKTCY*TLTWHMCVHAV
Trigger: TACGGCGTGCACACACATATGCCAGGTTAAAGTTCAGTAGCAAGTTTTTACAACATGATTTCTGCTGCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588021.5
CDS TCA 72 bp ATACTAAGACCCACTGAACCATACACTTCAAATGGGTaGGCTTTACGGTATGTAAAACAGATCTCAGCACAG +
Preference number: 6 (lower is better)
Translates to: ILRPTEPYTSNG*ALRYVKQISAQ
Trigger: CTGTGCTGAGATCTGTTTTACATACCGTAAAGCTCACCCATTTGAAGTGTATGGTTCAGTGGGTCTTAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590822.1
CDS CAA 90 bp TTTCACAAGATTTCCAATTTCACTTTCCAGTTGAATGAGAAACCATaGGACATTGATGTGGGAGTGAGAGATGGACCCTCTTACACCAGT +
Preference number: 6 (lower is better)
Translates to: FHKISNFTFQLNEKP*DIDVGVRDGPSYTS
Trigger: ACTGGTGTAAGAGGGTCCATCTCTCACTCCCACATCAATGTCCAATGGTTTCTCATTCAACTGGAAAGTGAAATTGGAAATCTTGTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587700.1
ENST00000589523.1
ENST00000589641.1
CDS TCA 72 bp TGCCTTTTCTATTTGTTTCTAGAAAGTAGGAGGCAATaGATCCCAAATGTCTCATTGGGTCTTATTTGGAGA +
Preference number: 6 (lower is better)
Translates to: CLFYLFLESRRQ*IPNVSLGLIWR
Trigger: TCTCCAAATAAGACCCAATGAGACATTTGGGATTCATTGCCTCCTACTTTCTAGAAACAAATAGAAAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587700.1