RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RFWD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000168411

Ensembl transcript IDs: ENST00000361070.9, ENST00000571750.5, ENST00000571776.1, ENST00000572337.5, ENST00000572610.1, ENST00000572840.1, ENST00000572990.5, ENST00000575113.1, ENST00000575154.1, ENST00000575281.1, ENST00000575397.5, ENST00000576652.1

Found 357 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGCTTCCATCACTGGGCCTGCCAATGTCCCAGCACTTCACACCTaGAACACAAGTGTTATTGCCACAAAGCACACCCAGGTGTGCTAT +
Preference number: 1 (lower is better)
Translates to: AASITGPANVPALHT*NTSVIATKHTQVCY
Trigger: ATAGCACACCTGGGTGTGCTTTGTGGCAATAACACTTGTGTTCCAGGTGTGAAGTGCTGGGACATTGGCAGGCCCAGTGATGGAAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR CCA 90 bp GAATATGGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTAAAGCCTaGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAATGGCA +
Preference number: 1 (lower is better)
Translates to: EYGGAETGGAQKTKA*IYKCDVLQRGLGMA
Trigger: TGCCATTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCTGGGCTCCACCAGTCTCTGCCCCACCATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR CCA 90 bp CTGACCTGCCCACATCTTGAAGCATATTCTGTTGTGGAAGTGGGTTaGCAAAGTAGTCTGAGGCAAGGCAAAGAAATACAAACTGAGCCC +
Preference number: 1 (lower is better)
Translates to: LTCPHLEAYSVVEVG*QSSLRQGKEIQTEP
Trigger: GGGCTCAGTTTGTATTTCTTTGCCTTGCCTCAGACTACTTTGCCAACCCACTTCCACAACAGAATATGCTTCAAGATGTGGGCAGGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR GCA 90 bp AATCAGACTGTTAAGCCATTTTCTCCCATGAACAGGACACTGACCTaGCCACATCTTGAAGCATATTCTGTTGTGGAAGTGGGTTGGCAA +
Preference number: 1 (lower is better)
Translates to: NQTVKPFSPMNRTLT*PHLEAYSVVEVGWQ
Trigger: TTGCCAACCCACTTCCACAACAGAATATGCTTCAAGATGTGGGCAGGTCAGTGTCCTGTTCATGGGAGAAAATGGCTTAACAGTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR TCA 90 bp GCCACAAAGCACACCCAGGTGTGCTATCACACACTTGTGTGGAGATaGGACAAGTTACTAAAAGATTGTCAGCCTTCAAGGTCAGAAATA +
Preference number: 1 (lower is better)
Translates to: ATKHTQVCYHTLVWR*DKLLKDCQPSRSEI
Trigger: TATTTCTGACCTTGAAGGCTGACAATCTTTTAGTAACTTGTCTCATCTCCACACAAGTGTGTGATAGCACACCTGGGTGTGCTTTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR TCA 90 bp AAATCAGTACCAAGACGATGGTTAGTCCCTTCAAGGATACTTAAGTaGCAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCT +
Preference number: 1 (lower is better)
Translates to: KSVPRRWLVPSRILK*QDNSDGMSYSPENA
Trigger: AGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGACTAACCATCGTCTTGGTACTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
3UTR GCA 90 bp GTGCCCTCTTGTGTTCAACTGAATAATACTCTTTTACATCTACGTTaGATCAAATCAGTACCAAGACGATGGTTAGTCCCTTCAAGGATA +
Preference number: 1 (lower is better)
Translates to: VPSCVQLNNTLLHLR*IKSVPRRWLVPSRI
Trigger: TATCCTTGAAGGGACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTGAACACAAGAGGGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
3UTR CAA 90 bp GGCCTGCCAATGTCCCAGCACTTCACACCTGGAACACAAGTGTTATaGCCACAAAGCACACCCAGGTGTGCTATCACACACTTGTGTGGA +
Preference number: 2 (lower is better)
Translates to: GLPMSQHFTPGTQVL*PQSTPRCAITHLCG
Trigger: TCCACACAAGTGTGTGATAGCACACCTGGGTGTGCTTTGTGGCAATAACACTTGTGTTCCAGGTGTGAAGTGCTGGGACATTGGCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR-3UTR CCA 90 bp CCGCTCAAACAACTGGCCTCTTTCCTTACCTTTCGCAAAGCAATGAACTTAATGAGCTGCTTCCATCACTaGGCCTGCCAATGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: PLKQLASFLTFRKAMNLMSCFHH*ACQCPS
Trigger: GCTGGGACATTGGCAGGCCCAGTGATGGAAGCAGCT...CATTAAGTTCATTGCTTTGCGAAAGGTAAGGAAAGAGGCCAGTTGTTTGAGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR-3UTR CCA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCCCACCTGTATCCTCTTaGTGGCAATCTGCTGAAGCC +
Preference number: 2 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSPPVSS*WQSAEA
Trigger: GGCTTCAGCAGATTGCCACCAAGAGGATACAGGTGG...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR-3UTR CCA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCCCTGTATCCTCTTGGTaGCAATCTGCTGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSPVSSW*QSAEAR
Trigger: TCTGGCTTCAGCAGATTGCCACCAAGAGGATACAGG...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR-3UTR CCA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCCACCGCTCAAACAACTaGCCTCTTTCCTTACCTTTC +
Preference number: 2 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSHRSNN*PLSLPF
Trigger: GAAAGGTAAGGAAAGAGGCCAGTTGTTTGAGCGGTG...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR CAA 90 bp GTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTaGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAG +
Preference number: 2 (lower is better)
Translates to: VTGQLRWDVIFPRKC*MPTHILDDERTLSK
Trigger: CTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
3UTR-3UTR TCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTTCTGTAGTGTCTCAGTaGCCTAGGGTCCTAGAATCA +
Preference number: 2 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTSVVSQ*PRVLES
Trigger: TGATTCTAGGACCCTAGGTCACTGAGACACTACAGA...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
3UTR-3UTR TCA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCTCTGTAGTGTCTCAGTaGCCTAGGGTCCTAGAATCA +
Preference number: 2 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPSVVSQ*PRVLES
Trigger: TGATTCTAGGACCCTAGGTCACTGAGACACTACAGA...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
3UTR-3UTR TCA 90 bp AGAAGACTAAAGCCTGGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAATTGGTGGCAATCTGCTaGAGCCAGATGAGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: RRLKPGFINVMSYNGDWELVAIC*SQMSSA
Trigger: AGCAGAACTCATCTGGCTTCAGCAGATTGCCACCAA...TTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR-3UTR CCA 90 bp CCGCTCAAACAACTGGCCTCTTTCCTTACCTTTCGCAAAGCAATGAACTTAATGCCAGCACTTCACACCTaGAACACAAGTGTTATTGCC +
Preference number: 2 (lower is better)
Translates to: PLKQLASFLTFRKAMNLMPALHT*NTSVIA
Trigger: GGCAATAACACTTGTGTTCCAGGTGTGAAGTGCTGG...CATTAAGTTCATTGCTTTGCGAAAGGTAAGGAAAGAGGCCAGTTGTTTGAGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR-3UTR CCA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCAAGCATATTCTGTTGTaGAAGTGGGTTGGCAAAGTA +
Preference number: 2 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSKHILL*KWVGKV
Trigger: TACTTTGCCAACCCACTTCCACAACAGAATATGCTT...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR CAA 90 bp GTGCTATCACACACTTGTGTGGAGATGAGACAAGTTACTAAAAGATaGTCAGCCTTCAAGGTCAGAAATAAACCGGACACAAGGTTCTAC +
Preference number: 2 (lower is better)
Translates to: VLSHTCVEMRQVTKR*SAFKVRNKPDTRFY
Trigger: GTAGAACCTTGTGTCCGGTTTATTTCTGACCTTGAAGGCTGACAATCTTTTAGTAACTTGTCTCATCTCCACACAAGTGTGTGATAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR-3UTR GCA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCCTTTTACATCTACGTTaGATCAAATCAGTACCAAGA +
Preference number: 2 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSLLHLR*IKSVPR
Trigger: TCTTGGTACTGATTTGATGCAACGTAGATGTAAAAG...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR-3UTR GCA 90 bp TCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCCCTTCATATTCCCCAGAAAATaGTTGATGCCCACTCACATC +
Preference number: 2 (lower is better)
Translates to: SFTSTLHQISTKTMVSPFIFPRK*LMPTHI
Trigger: GATGTGAGTGGGCATCAAGCATTTTCTGGGGAATAT...GAAGGGACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
3UTR-3UTR GCA 90 bp AATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCATATTCCCCAGAAAATaGTTGATGCCCACTCACATC +
Preference number: 2 (lower is better)
Translates to: NTLLHLRCIKSVPRRWLVIFPRK*LMPTHI
Trigger: GATGTGAGTGGGCATCAAGCATTTTCTGGGGAATAT...GACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
3UTR TCA 72 bp GCCTGCCCAGGCCCAAAGACAAAGCCAGCCAGGACCTaGCCACCTGTATCCTCTTGGTGGCAATCTGCTGAA +
Preference number: 3 (lower is better)
Translates to: ACPGPKTKPART*PPVSSWWQSAE
Trigger: TTCAGCAGATTGCCACCAAGAGGATACAGGTGGTCAGGTCCTGGCTGGCTTTGTCTTTGGGCCTGGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR GCA 72 bp AGGGAATCGTTCACTAGCTGCTTCCATCACTGGGCCTaGCAATGTCCCAGCACTTCACACCTGGAACACAAG +
Preference number: 3 (lower is better)
Translates to: RESFTSCFHHWA*QCPSTSHLEHK
Trigger: CTTGTGTTCCAGGTGTGAAGTGCTGGGACATTGGCAGGCCCAGTGATGGAAGCAGCTAGTGAACGATTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR-3UTR CAA 90 bp GGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTAAAGCCTGGATTTATAAATGTAAACAGGGATCTTGCTaGGGGCTGCTAGGCGCTAGC +
Preference number: 3 (lower is better)
Translates to: GGAETGGAQKTKAWIYKCKQGSC*GLLGAS
Trigger: GCTAGCGCCTAGCAGCCCCAAGCAAGATCCCTGTTT...ACATTTATAAATCCAGGCTTTAGTCTTCTGGGCTCCACCAGTCTCTGCCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR CCA 72 bp ATCACTGGGCCTGCCAATGTCCCAGCACTTCACACCTaGAACACAAGTGTTATTGCCACAAAGCACACCCAG +
Preference number: 3 (lower is better)
Translates to: ITGPANVPALHT*NTSVIATKHTQ
Trigger: CTGGGTGTGCTTTGTGGCAATAACACTTGTGTTCCAGGTGTGAAGTGCTGGGACATTGGCAGGCCCAGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR-3UTR CAA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCAAACAGGGATCTTGCTaGGGGCTGCTAGGCGCTAGC +
Preference number: 3 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDAKQGSC*GLLGAS
Trigger: GCTAGCGCCTAGCAGCCCCAAGCAAGATCCCTGTTT...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
3UTR TCA 72 bp CCAAGACGATGGTTAGTCCCTTCAAGGATACTTAAGTaGCAGGACAACTCAGATGGGATGTCATATTCCCCA +
Preference number: 3 (lower is better)
Translates to: PRRWLVPSRILK*QDNSDGMSYSP
Trigger: TGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGACTAACCATCGTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
3UTR TCA 72 bp CATATTCTGTTGTGGAAGTGGGTTGGCAAAGTAGTCTaGGGCAAGGCAAAGAAATACAAACTGAGCCCTAGA +
Preference number: 3 (lower is better)
Translates to: HILLWKWVGKVV*GKAKKYKLSPR
Trigger: TCTAGGGCTCAGTTTGTATTTCTTTGCCTTGCCTCAGACTACTTTGCCAACCCACTTCCACAACAGAATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR TCA 72 bp CCTGTATCCTCTTGGTGGCAATCTGCTGAAGCCAGATaGGTTCTGCTTTTTAATTCCAATCCTATTCTGCCA +
Preference number: 3 (lower is better)
Translates to: PVSSWWQSAEAR*VLLFNSNPILP
Trigger: TGGCAGAATAGGATTGGAATTAAAAAGCAGAACTCATCTGGCTTCAGCAGATTGCCACCAAGAGGATACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR-3UTR CAA 90 bp AATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCTTCCCCAGAAAATGCTaGATGCCCACTCACATCCTA +
Preference number: 3 (lower is better)
Translates to: NTLLHLRCIKSVPRRWLVFPRKC*MPTHIL
Trigger: TAGGATGTGAGTGGGCATCAAGCATTTTCTGGGGAA...GACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
3UTR-3UTR CAA 90 bp CCGCTCAAACAACTGGCCTCTTTCCTTACCTTTCGCAAAGCAATGAACTTAATGTCTTTTACATCTACGTaGCATCAAATCAGTACCAAG +
Preference number: 3 (lower is better)
Translates to: PLKQLASFLTFRKAMNLMSFTST*HQISTK
Trigger: CTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA...CATTAAGTTCATTGCTTTGCGAAAGGTAAGGAAAGAGGCCAGTTGTTTGAGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR-3UTR CAA 90 bp AGAAGACTAAAGCCTGGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAACACGATCGTATGAATTaGCTTCCAAAACATCCAAAT +
Preference number: 3 (lower is better)
Translates to: RRLKPGFINVMSYNGDWEHDRMN*LPKHPN
Trigger: ATTTGGATGTTTTGGAAGCAAATTCATACGATCGTG...TTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR CCA 72 bp TCAAGTAAAAGCTTTGACCTATCACTCATCTTTTCCTaGCAAGAGATAGTGTTCTTCAAAGCACTAGCTTGG +
Preference number: 3 (lower is better)
Translates to: SSKSFDLSLIFS*QEIVFFKALAW
Trigger: CCAAGCTAGTGCTTTGAAGAACACTATCTCTTGCCAGGAAAAGATGAGTGATAGGTCAAAGCTTTTACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR TCA 72 bp GGACACAAGGTTCTACAGTGCCCTCTTGTGTTCAACTaGATAATACTCTTTTACATCTACGTTGCATCAAAT +
Preference number: 3 (lower is better)
Translates to: GHKVLQCPLVFN*IILFYIYVASN
Trigger: ATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTGAACACAAGAGGGCACTGTAGAACCTTGTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR GCA 72 bp TGTGTTCAACTGAATAATACTCTTTTACATCTACGTTaGATCAAATCAGTACCAAGACGATGGTTAGTCCCT +
Preference number: 3 (lower is better)
Translates to: CVQLNNTLLHLR*IKSVPRRWLVP
Trigger: AGGGACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTGAACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp TCTTGCTTGGGGCTGCTAGGCGCTAGCAAACAACATCTAACCAGCAGCATGCCTAGGGCTGGTCCCCCTTaGCTGCTGGCCATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SCLGLLGASKQHLTSSMPRAGPP*LLAMPA
Trigger: TGCTGGCATGGCCAGCAGCCAAGGGGGACCAGCCCT...AGGCATGCTGCTGGTTAGATGTTGTTTGCTAGCGCCTAGCAGCCCCAAGCAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CTAGGCATTAGCAAAGGGAATCGTTCACTAGCTGCTTCCATCACTGGGCCTGCCGCACTGTCTGTCCTCTaGGACCCTCCGGCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LGISKGNRSLAASITGPAALSVL*DPPALA
Trigger: GGCAAGAGCCGGAGGGTCTCAGAGGACAGACAGTGC...GGCAGGCCCAGTGATGGAAGCAGCTAGTGAACGATTCCCTTTGCTAATGCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp TCTTGCTTGGGGCTGCTAGGCGCTAGCAAACAACATCTAACCAGCAGCATGCCTGAGCTGGCTGGAGGATaGATGGTACCCCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SCLGLLGASKQHLTSSMPELAGG*MVPPGC
Trigger: GCAGCCAGGGGGTACCATCCATCCTCCAGCCAGCTC...AGGCATGCTGCTGGTTAGATGTTGTTTGCTAGCGCCTAGCAGCCCCAAGCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCAGGGCTGGTCCCCCTTaGCTGCTGGCCATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSRAGPP*LLAMPA
Trigger: TGCTGGCATGGCCAGCAGCCAAGGGGGACCAGCCCT...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp CTAGGCATTAGCAAAGGGAATCGTTCACTAGCTGCTTCCATCACTGGGCCTGCCAATGCTGAGAGCCGGTaGTCCCCAGCATTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LGISKGNRSLAASITGPANAESR*SPALVH
Trigger: GTGGACCAATGCTGGGGACCACCGGCTCTCAGCATT...GGCAGGCCCAGTGATGGAAGCAGCTAGTGAACGATTCCCTTTGCTAATGCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATGCCCTGGCTGGAGGGTaGGCAGCTCAGGACCCATGC +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHALAGG*AAQDPC
Trigger: GCATGGGTCCTGAGCTGCTCACCCTCCAGCCAGGGC...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CTAGGCATTAGCAAAGGGAATCGTTCACTAGCTGCTTCCATCACTGGGCCTGCCATGTCCAACACAGGCTaGTCGGTCTGTAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGISKGNRSLAASITGPAMSNTG*SVCRSW
Trigger: CCAGGACCTACAGACCGATCAGCCTGTGTTGGACAT...GGCAGGCCCAGTGATGGAAGCAGCTAGTGAACGATTCCCTTTGCTAATGCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp AGAGGTAGTGACAAAGGAATATGGTGGGGCAGAGACTGGTGGAGCCCAGAAGACCTGTCTGAAAGTCTATaGAGCCCCCTGGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RGSDKGIWWGRDWWSPEDLSESL*SPLAPR
Trigger: CCTTGGAGCCAGGGGGCTGCATAGACTTTCAGACAG...GTCTTCTGGGCTCCACCAGTCTCTGCCCCACCATATTCCTTTGTCACTACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCGTACCCCCTGGCTGCTaGCCACATCAGCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSVPPGC*PHQQEQ
Trigger: CTGTTCCTGCTGATGTGGTCAGCAGCCAGGGGGTAC...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCTCAGCAGGAACAGGCTaGAGGAGGGCTGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVSAGTG*RRAGPP
Trigger: AGGGGGACCAGCCCTCCTCCAGCCTGTTCCTGCTGA...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTAGTTGCGGAGCAGGCTaGAGCAGGGGTGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTSCGAG*SRGGVA
Trigger: AGCGACACCACCCCTGCTCCAGCCTGCTCCGCAACT...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp TCTTGCTTGGGGCTGCTAGGCGCTAGCAAACAACATCTAACCAGCAGCATGCCTCCAGATTCCTCTGCCTaGTCAACAACCCCTCCATAC +
Preference number: 4 (lower is better)
Translates to: SCLGLLGASKQHLTSSMPPDSSA*STTPPY
Trigger: GTATGGAGGGGTTGTTGACCAGGCAGAGGAATCTGG...AGGCATGCTGCTGGTTAGATGTTGTTTGCTAGCGCCTAGCAGCCCCAAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCGGAGCAACGAGCCACTaGCAGCATCCCACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDAGATSH*QHPTAG
Trigger: CCCTGCTGTGGGATGCTGCCAGTGGCTCGTTGCTCC...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTTTCATGAGCCATCACTaGAACCAGCAGGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTFMSHH*NQQAAA
Trigger: GGCCGCGGCCTGCTGGTTTCAGTGATGGCTCATGAA...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp AGAAGACTAAAGCCTGGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAACTGGTCCCCCTTGGCTaGTGGCCATGCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RRLKPGFINVMSYNGDWELVPLG*WPCQQE
Trigger: CTCCTGCTGGCATGGCCAGCAGCCAAGGGGGACCAG...TTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCGCAGCTCAGGACCCATaGTTGGGAGCCCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPAAQDP*LGAPGL
Trigger: CAACCCAGGGGCTCCCAAGCATGGGTCCTGAGCTGC...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGTCAGCAGGAACAGGCTaGAGGAGGGCTGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQSAGTG*RRAGPP
Trigger: AGGGGGACCAGCCCTCCTCCAGCCTGTTCCTGCTGA...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCAGGGGTGGTGTCGCTTaGCTGCTGATCACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSRGGVA*LLITSA
Trigger: TGCTGAGGTGATCAGCAGCCAAGCGACACCACCCCT...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp GGCCTGCCAATGTCCCAGCACTTCACACCTGGAACACAAGTGTTATTGCCACAAAGACTTCTGGGGAGATaGCTGTTTGGGGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: GLPMSQHFTPGTQVLLPQRLLGR*LFGEGL
Trigger: AAGACCCTCCCCAAACAGCCATCTCCCCAGAAGTCT...TTGTGGCAATAACACTTGTGTTCCAGGTGTGAAGTGCTGGGACATTGGCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp GGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTAAAGCCTGGATTTATAAATGTAGAGGCTCAGACTTCTaGGGAGATGGCTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GGAETGGAQKTKAWIYKCRGSDF*GDGCLG
Trigger: CCCCAAACAGCCATCTCCCCAGAAGTCTGAGCCTCT...ACATTTATAAATCCAGGCTTTAGTCTTCTGGGCTCCACCAGTCTCTGCCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCTCAGGACCCATGCTTaGGAGCCCCTGGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDALRTHA*EPLGCC
Trigger: ACAGCAACCCAGGGGCTCCCAAGCATGGGTCCTGAG...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGGGAGCAACGAGCCACTaGCAGCATCCCACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQGATSH*QHPTAG
Trigger: CCCTGCTGTGGGATGCTGCCAGTGGCTCGTTGCTCC...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp TCTTGCTTGGGGCTGCTAGGCGCTAGCAAACAACATCTAACCAGCAGCATGCCTACGGTTCACCTCAAATaGGCAGATGTCCAACACAGG +
Preference number: 4 (lower is better)
Translates to: SCLGLLGASKQHLTSSMPTVHLK*ADVQHR
Trigger: CCTGTGTTGGACATCTGCCCATTTGAGGTGAACCGT...AGGCATGCTGCTGGTTAGATGTTGTTTGCTAGCGCCTAGCAGCCCCAAGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGGTACCCCCTGGCTGCTaGCCACATCAGCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQVPPGC*PHQQEQ
Trigger: CTGTTCCTGCTGATGTGGTCAGCAGCCAGGGGGTAC...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGGTGTCGCTTGGCTGCTaGTCACCTCAGCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQVSLGC*SPQQEL
Trigger: CAGCTCCTGCTGAGGTGATCAGCAGCCAAGCGACAC...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTGGCTCTTGCCCTCCGTaGAGCAGATACCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTGSCPP*SRYPPS
Trigger: AGAAGGAGGGTATCTGCTTCACGGAGGGCAAGAGCC...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCAGGCCCTGGCTGGAGGGTaGGCAGCTCAGGACCCATGC +
Preference number: 4 (lower is better)
Translates to: PRIILMQTNHDSQCSRLQALAGG*AAQDPC
Trigger: GCATGGGTCCTGAGCTGCTCACCCTCCAGCCAGGGC...CTGCAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp GGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTAAAGCCTGGATTTATAAATGTCATCACAGTATGCCATaGTCCGGCAGTTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGAETGGAQKTKAWIYKCHHSMP*SGSFLP
Trigger: AGGCAGGAAACTGCCGGATCATGGCATACTGTGATG...ACATTTATAAATCCAGGCTTTAGTCTTCTGGGCTCCACCAGTCTCTGCCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCAGCTCTGGGCATGTATaGCAGGGAGACCAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDASSGHV*QGDQWA
Trigger: TGCCCACTGGTCTCCCTGTCATACATGCCCAGAGCT...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CTAGGCATTAGCAAAGGGAATCGTTCACTAGCTGCTTCCATCACTGGGCCTGCCTTTCTGTTCCCAGAATaGAGCATCCTCCAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LGISKGNRSLAASITGPAFLFPE*SILQGS
Trigger: GGAACCTTGGAGGATGCTTCATTCTGGGAACAGAAA...GGCAGGCCCAGTGATGGAAGCAGCTAGTGAACGATTCCCTTTGCTAATGCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp GGCCTGCCAATGTCCCAGCACTTCACACCTGGAACACAAGTGTTATTGCCACAATTATCAGTGAGGACCTaGAGTTGGAGTCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GLPMSQHFTPGTQVLLPQLSVRT*SWSRHC
Trigger: ACAGTGCCGACTCCAACTGCAGGTCCTCACTGATAA...TTGTGGCAATAACACTTGTGTTCCAGGTGTGAAGTGCTGGGACATTGGCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp GACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACATGGATGGTACCCCCTaGCTGCTGACCACATCAGCA +
Preference number: 4 (lower is better)
Translates to: DRTTQMGCHIPQKMLDAHMDGTP*LLTTSA
Trigger: TGCTGATGTGGTCAGCAGCCAGGGGGTACCATCCAT...GTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCCACCTCAGCAGGAGCTaGCTGGAGGATGGATGGTAC +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVHLSRS*LEDGWY
Trigger: GTACCATCCATCCTCCAGCCAGCTCCTGCTGAGGTG...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp GGCCTGCCAATGTCCCAGCACTTCACACCTGGAACACAAGTGTTATTGCCACAAATCATAAGTGGTAGCTaGCAAGTCAGGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GLPMSQHFTPGTQVLLPQIISGS*QVRLGP
Trigger: AGGACCCAGCCTGACTTGCCAGCTACCACTTATGAT...TTGTGGCAATAACACTTGTGTTCCAGGTGTGAAGTGCTGGGACATTGGCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCGGGGAGATGGCTGTTTaGGGAGGGTCTTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVGEMAV*GGSCLH
Trigger: ATGGAGGCAAGACCCTCCCCAAACAGCCATCTCCCC...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATGTCTATGCAGCCCCCTaGCTCCAAGGGCAGCACATG +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHVYAAP*LQGQHM
Trigger: CATGTGCTGCCCTTGGAGCCAGGGGGCTGCATAGAC...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp GACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACAATTCCAGCATGCCATaGAGTCTCTGCAGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: DRTTQMGCHIPQKMLDAHNSSMP*SLCSPL
Trigger: CAGCGGACTGCAGAGACTTCATGGCATGCTGGAATT...GTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp GGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTAAAGCCTGGATTTATAAATGTGGAAGAAAAGAGGCCTaGGGAGAAGGCTGTGATATC +
Preference number: 4 (lower is better)
Translates to: GGAETGGAQKTKAWIYKCGRKEA*GEGCDI
Trigger: GATATCACAGCCTTCTCCTCAGGCCTCTTTTCTTCC...ACATTTATAAATCCAGGCTTTAGTCTTCTGGGCTCCACCAGTCTCTGCCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCTGGTCCCCCTTGGCTaGTGGCCATGCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLLVPLG*WPCQQE
Trigger: CTCCTGCTGGCATGGCCAGCAGCCAAGGGGGACCAG...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCAGGTCAACAGACAGTTaGGGAGCAGGCTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPRSTDS*GAGWSR
Trigger: CCTGCTCCAGCCTGCTCCGCAACTGTCTGTTGACCT...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCAGCTCCAGATTCCTCTaGCTGGTCAACAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVSSRFL*LVNNPS
Trigger: GGAGGGGTTGTTGACCAGGCAGAGGAATCTGGAGCT...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp ATAAACCGGACACAAGGTTCTACAGTGCCCTCTTGTGTTCAACTGAATAATACTGCAGCTCAGGACCCATaGTTGGGAGCCCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: INRTQGSTVPSCVQLNNTAAQDP*LGAPGL
Trigger: CAACCCAGGGGCTCCCAAGCATGGGTCCTGAGCTGC...AGTATTATTCAGTTGAACACAAGAGGGCACTGTAGAACCTTGTGTCCGGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATTGGTACTTGTGCTTGTaGTGGCCCTGGCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHWYLCL*WPWLEG
Trigger: ACCCTCCAGCCAGGGCCAGCACAAGCACAAGTACCA...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp GACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACACTCACTGCAACCTCTaGCTCCCAGGGTTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: DRTTQMGCHIPQKMLDAHTHCNL*LPGFKQ
Trigger: TTGCTTGAACCCTGGGAGGCAGAGGTTGCAGTGAGT...GTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAGGGGTGGTGTCGCTTaGCTGCTGATCACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQRGGVA*LLITSA
Trigger: TGCTGAGGTGATCAGCAGCCAAGCGACACCACCCCT...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp TGGCAAGAGATAGTGTTCTTCAAAGCACTAGCTTGGATAAAACCAATCCTGAGAAGTTGCGGAGCAGGCTaGAGCAGGGGTGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: WQEIVFFKALAWIKPILRSCGAG*SRGGVA
Trigger: AGCGACACCACCCCTGCTCCAGCCTGCTCCGCAACT...TCTCAGGATTGGTTTTATCCAAGCTAGTGCTTTGAAGAACACTATCTCTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp GACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACATGGTGCTCTCAACCTaGCACTGTCTGTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: DRTTQMGCHIPQKMLDAHMVLST*HCLSSE
Trigger: CTCAGAGGACAGACAGTGCCAGGTTGAGAGCACCAT...GTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp GACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACAGACTTCTGGGGAGATaGCTGTTTGGGGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: DRTTQMGCHIPQKMLDAHRLLGR*LFGEGL
Trigger: AAGACCCTCCCCAAACAGCCATCTCCCCAGAAGTCT...GTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCAATGCTGAGAGCCGGTaGTCCCCAGCATTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPNAESR*SPALVH
Trigger: GTGGACCAATGCTGGGGACCACCGGCTCTCAGCATT...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp GGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTAAAGCCTGGATTTATAAATGTCTGGCAGGAGCAGATTaGATTTCCAGTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: GGAETGGAQKTKAWIYKCLAGAD*ISSVIQ
Trigger: CTGGATGACACTGGAAATCCAATCTGCTCCTGCCAG...ACATTTATAAATCCAGGCTTTAGTCTTCTGGGCTCCACCAGTCTCTGCCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATAGCTGCTTCCATCACTaGGCCTGCCAATGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHSCFHH*ACQCPS
Trigger: GCTGGGACATTGGCAGGCCCAGTGATGGAAGCAGCT...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR CAA 72 bp ATGTCCCAGCACTTCACACCTGGAACACAAGTGTTATaGCCACAAAGCACACCCAGGTGTGCTATCACACAC +
Preference number: 4 (lower is better)
Translates to: MSQHFTPGTQVL*PQSTPRCAITH
Trigger: GTGTGTGATAGCACACCTGGGTGTGCTTTGTGGCAATAACACTTGTGTTCCAGGTGTGAAGTGCTGGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTAATTCCAGCATGCCATaGAGTCTCTGCAGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTNSSMP*SLCSPL
Trigger: CAGCGGACTGCAGAGACTTCATGGCATGCTGGAATT...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCAGGCACTGTCTGTCCTCTaGGACCCTCCGGCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: PRIILMQTNHDSQCSRLQALSVL*DPPALA
Trigger: GGCAAGAGCCGGAGGGTCTCAGAGGACAGACAGTGC...CTGCAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATCTGAGGAGAAGGCTGTaGTATCACCAGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHLRRRL*YHQAAQ
Trigger: CTGAGCTGCCTGGTGATATCACAGCCTTCTCCTCAG...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp AGAAGACTAAAGCCTGGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAAAAGCCAGCCAGGACCTaGCCACCTGTATCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RRLKPGFINVMSYNGDWEKPART*PPVSSW
Trigger: CCAAGAGGATACAGGTGGTCAGGTCCTGGCTGGCTT...TTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp TCTTGCTTGGGGCTGCTAGGCGCTAGCAAACAACATCTAACCAGCAGCATGCCTGAACTACTAGACACCTaGAACTCTTCAGATACAGGA +
Preference number: 4 (lower is better)
Translates to: SCLGLLGASKQHLTSSMPELLDT*NSSDTG
Trigger: TCCTGTATCTGAAGAGTTGCAGGTGTCTAGTAGTTC...AGGCATGCTGCTGGTTAGATGTTGTTTGCTAGCGCCTAGCAGCCCCAAGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCCAGAGCATCACAGTATaGCATGATCCGGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSQSITV*HDPAVS
Trigger: GGAAACTGCCGGATCATGGCATACTGTGATGCTCTG...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGGAGCTGGCTGGAGGATaGATGGTACCCCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLELAGG*MVPPGC
Trigger: GCAGCCAGGGGGTACCATCCATCCTCCAGCCAGCTC...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp GGCCTGCCAATGTCCCAGCACTTCACACCTGGAACACAAGTGTTATTGCCACAACCAGAATTGAACCATTaGCCAGTCCAGCATAGATGT +
Preference number: 4 (lower is better)
Translates to: GLPMSQHFTPGTQVLLPQPELNH*PVQHRC
Trigger: ACATCTATGCTGGACTGGCCAATGGTTCAATTCTGG...TTGTGGCAATAACACTTGTGTTCCAGGTGTGAAGTGCTGGGACATTGGCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATGATGCTGGGATGGTGTaGTTACCATCAGATCCCTGC +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHDAGMV*LPSDPC
Trigger: GCAGGGATCTGATGGTAATCACACCATCCCAGCATC...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp GGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTAAAGCCTGGATTTATAAATGTGATGAAGTTGGTCATTaGATGCAACGAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: GGAETGGAQKTKAWIYKCDEVGH*MQRRCW
Trigger: CCAGCATCTTCGTTGCATTCAATGACCAACTTCATC...ACATTTATAAATCCAGGCTTTAGTCTTCTGGGCTCCACCAGTCTCTGCCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCGTCATATACCAGAATTaGACCATTGGCCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSVIYQN*TIGQSS
Trigger: GCTGGACTGGCCAATGGTTCAATTCTGGTATATGAC...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGACTAACTCCTGCACATaGCTGCTCGTGTTTCGCACG +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQTNSCT*LLVFRT
Trigger: CGTGCGAAACACGAGCAGTCATGTGCAGGAGTTAGT...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATACTAACTCCTGCACATaGCTGCTCGTGTTTCGCACG +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHTNSCT*LLVFRT
Trigger: CGTGCGAAACACGAGCAGTCATGTGCAGGAGTTAGT...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp ATAAACCGGACACAAGGTTCTACAGTGCCCTCTTGTGTTCAACTGAATAATACTAGCTCTGGGCATGTATaGCAGGGAGACCAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: INRTQGSTVPSCVQLNNTSSGHV*QGDQWA
Trigger: TGCCCACTGGTCTCCCTGTCATACATGCCCAGAGCT...AGTATTATTCAGTTGAACACAAGAGGGCACTGTAGAACCTTGTGTCCGGTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATGAGCTGTTCTCTGTCTaGAAGTCTATGCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHELFSV*KSMQPP
Trigger: AGGGGGCTGCATAGACTTTCAGACAGAGAACAGCTC...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCTCTGTAGTGTCTCAGTaGCCTAGGGTCCTAGAATCA +
Preference number: 4 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSSVVSQ*PRVLES
Trigger: TGATTCTAGGACCCTAGGTCACTGAGACACTACAGA...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCAACCCCTCCATACTCTaGAGAGCTGTCACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDANPSIL*RAVTVR
Trigger: TCTGACAGTGACAGCTCTGCAGAGTATGGAGGGGTT...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp AGAAGACTAAAGCCTGGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAAAGCTCCAGATTCCTCTaGCTGGTCAACAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: RRLKPGFINVMSYNGDWESSRFL*LVNNPS
Trigger: GGAGGGGTTGTTGACCAGGCAGAGGAATCTGGAGCT...TTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp TCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCCCTTCTGGTACTTGTGCTTGTaGTGGCCCTGGCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SFTSTLHQISTKTMVSPFWYLCL*WPWLEG
Trigger: ACCCTCCAGCCAGGGCCAGCACAAGCACAAGTACCA...GAAGGGACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTGATCCGGCAGTTTCCTaGCTGAGATACTGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTDPAVS*LRYCEG
Trigger: ACCTTCACAGTATCTCAGGCAGGAAACTGCCGGATC...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCGATCCGGCAGTTTCCTaGCTGAGATACTGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDADPAVS*LRYCEG
Trigger: ACCTTCACAGTATCTCAGGCAGGAAACTGCCGGATC...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCACTCCTGCACATGACTaGTCGTGTTTCGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVTPAHD*SCFARH
Trigger: ATGACGTGCGAAACACGAGCAGTCATGTGCAGGAGT...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCAGGGCAGAATTTGCTaGTTCATCCCCAGTACACAC +
Preference number: 4 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDAQGRIC*FIPSTH
Trigger: GTGTGTACTGGGGATGAAGCAGCAAATTCTGCCCTG...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCAGGGCAGAATTTGCTaGTTCATCCCCAGTACACAC +
Preference number: 4 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTQGRIC*FIPSTH
Trigger: GTGTGTACTGGGGATGAAGCAGCAAATTCTGCCCTG...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCAGCAGGGCAGAATTTaGTGCTTCATCCCCAGTACA +
Preference number: 4 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTQQGRI*CFIPST
Trigger: TGTACTGGGGATGAAGCAGCAAATTCTGCCCTGCTG...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATTTCCATCACTGGGCCTaGCAATGTCCCAGCACTTCA +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHFHHWA*QCPSTS
Trigger: TGAAGTGCTGGGACATTGGCAGGCCCAGTGATGGAA...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp GGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTAAAGCCTGGATTTATAAATGTAACAGGACACTGACCTaGCCACATCTTGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: GGAETGGAQKTKAWIYKCNRTLT*PHLEAY
Trigger: ATATGCTTCAAGATGTGGGCAGGTCAGTGTCCTGTT...ACATTTATAAATCCAGGCTTTAGTCTTCTGGGCTCCACCAGTCTCTGCCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp ATAAACCGGACACAAGGTTCTACAGTGCCCTCTTGTGTTCAACTGAATAATACTCACCTCAGCAGGAGCTaGCTGGAGGATGGATGGTAC +
Preference number: 4 (lower is better)
Translates to: INRTQGSTVPSCVQLNNTHLSRS*LEDGWY
Trigger: GTACCATCCATCCTCCAGCCAGCTCCTGCTGAGGTG...AGTATTATTCAGTTGAACACAAGAGGGCACTGTAGAACCTTGTGTCCGGTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp GGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTAAAGCCTGGATTTATAAATGTACGAAGATGCTGGGATaGTGTGATTACCATCAGATC +
Preference number: 4 (lower is better)
Translates to: GGAETGGAQKTKAWIYKCTKMLG*CDYHQI
Trigger: GATCTGATGGTAATCACACCATCCCAGCATCTTCGT...ACATTTATAAATCCAGGCTTTAGTCTTCTGGGCTCCACCAGTCTCTGCCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGCCAGATTCCTCTGCCTaGTCAACAACCCCTCCATAC +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQPDSSA*STTPPY
Trigger: GTATGGAGGGGTTGTTGACCAGGCAGAGGAATCTGG...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp TGGCAAGAGATAGTGTTCTTCAAAGCACTAGCTTGGATAAAACCAATCCTGAGAGGGGAGATGGCTGTTTaGGGAGGGTCTTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: WQEIVFFKALAWIKPILRGEMAV*GGSCLH
Trigger: ATGGAGGCAAGACCCTCCCCAAACAGCCATCTCCCC...TCTCAGGATTGGTTTTATCCAAGCTAGTGCTTTGAAGAACACTATCTCTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCATGCTTGGGAGCCCCTaGGTTGCTGTAAATTCTGAC +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVMLGSP*VAVNSD
Trigger: GTCAGAATTTACAGCAACCCAGGGGCTCCCAAGCAT...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCAGGTCTATGCAGCCCCCTaGCTCCAAGGGCAGCACATG +
Preference number: 4 (lower is better)
Translates to: PRIILMQTNHDSQCSRLQVYAAP*LQGQHM
Trigger: CATGTGCTGCCCTTGGAGCCAGGGGGCTGCATAGAC...CTGCAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp AGAGGTAGTGACAAAGGAATATGGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTCAGCACACTTCGTATaGTGGTGTGATTTTTATCAG +
Preference number: 4 (lower is better)
Translates to: RGSDKGIWWGRDWWSPEDSAHFV*WCDFYQ
Trigger: CTGATAAAAATCACACCACCATACGAAGTGTGCTGA...GTCTTCTGGGCTCCACCAGTCTCTGCCCCACCATATTCCTTTGTCACTACCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp TCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCCCTTCTCGGTCTGTAGGTCCTaGAGCAACGAGCCACTGGCA +
Preference number: 4 (lower is better)
Translates to: SFTSTLHQISTKTMVSPFSVCRS*SNEPLA
Trigger: TGCCAGTGGCTCGTTGCTCCAGGACCTACAGACCGA...GAAGGGACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATGGGGTTTCACCATGTTaGTCAGGCTGGACAAGGCTT +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHGVSPC*SGWTRL
Trigger: AAGCCTTGTCCAGCCTGACCAACATGGTGAAACCCC...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTTCCTACAACGGGGACTaGGAATGGCATCAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTSYNGD*EWHQGF
Trigger: AAAACCCTGATGCCATTCCCAGTCCCCGTTGTAGGA...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCAGTGACAAAGGAATATaGTGGGGCAGAGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVSDKGI*WGRDWW
Trigger: CCACCAGTCTCTGCCCCACCATATTCCTTTGTCACT...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGGGCTCTTGCCCTCCGTaGAGCAGATACCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLGSCPP*SRYPPS
Trigger: AGAAGGAGGGTATCTGCTTCACGGAGGGCAAGAGCC...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCAGGATTCCTAGTCTCTaGATCATAAGTGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSRIPSL*IISGSW
Trigger: CCAGCTACCACTTATGATTCAGAGACTAGGAATCCT...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCTGCCTGAGATACTGTaGAGGTCTTTTGGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDALPEIL*RSFGSG
Trigger: ACCACTTCCAAAAGACCTTCACAGTATCTCAGGCAG...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp TCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCCCTTCCTGAGGAGAAGGCTGTaGTATCACCAGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SFTSTLHQISTKTMVSPFLRRRL*YHQAAQ
Trigger: CTGAGCTGCCTGGTGATATCACAGCCTTCTCCTCAG...GAAGGGACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATGGAAGAAAAGAGGCCTaGGGAGAAGGCTGTGATATC +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHGRKEA*GEGCDI
Trigger: GATATCACAGCCTTCTCCTCAGGCCTCTTTTCTTCC...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCTGCATCGGAATGTACTaGCTGCTCTTCATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVCIGMY*LLFMLA
Trigger: TGCCAACATGAAGAGCAGTCAGTACATTCCGATGCA...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGATATGGAAATGCAGCTaGGGCAGCTCTGGGCATGTA +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQIWKCS*GSSGHV
Trigger: TACATGCCCAGAGCTGCCTCAGCTGCATTTCCATAT...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCTTTCTGTTCCCAGAATaGAGCATCCTCCAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDAFLFPE*SILQGS
Trigger: GGAACCTTGGAGGATGCTTCATTCTGGGAACAGAAA...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCCCTAGAAACAGCTCTTaGATTGACAGGTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSPRNSS*IDRSEV
Trigger: CACTTCTGACCTGTCAATTCAAGAGCTGTTTCTAGG...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGAGGTCAACAGACAGTTaGGGAGCAGGCTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLRSTDS*GAGWSR
Trigger: CCTGCTCCAGCCTGCTCCGCAACTGTCTGTTGACCT...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp CCGCTCAAACAACTGGCCTCTTTCCTTACCTTTCGCAAAGCAATGAACTTAATGAGTCAGGCTGGGTCCTaGTCACCTGAAAGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: PLKQLASFLTFRKAMNLMSQAGS*SPESKH
Trigger: ATGCTTACTTTCAGGTGAGCAGGACCCAGCCTGACT...CATTAAGTTCATTGCTTTGCGAAAGGTAAGGAAAGAGGCCAGTTGTTTGAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCAGTCAGGCTGGGTCCTaGTCACCTGAAAGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPSQAGS*SPESKH
Trigger: ATGCTTACTTTCAGGTGAGCAGGACCCAGCCTGACT...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCCTATACCCAAAGAGATaGCCACAGCGTAATGCTGAG +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVLYPKR*PQRNAE
Trigger: CTCAGCATTACGCTGTGGGCATCTCTTTGGGTATAG...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCTTATCAGTGAGGACCTaGAGTTGGAGTCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPLSVRT*SWSRHC
Trigger: ACAGTGCCGACTCCAACTGCAGGTCCTCACTGATAA...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp GACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTACACACCAGGATGTTaGCATCATTCTCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: DRTTQMGCHIPQKMLDAHYTPGC*HHSLGF
Trigger: AAAGCCCAGAGAATGATGGCAACATCCTGGTGTGTA...GTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp GACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACAGGCATGCGCACCACTaGACCCAGTTAATTTTTGTA +
Preference number: 4 (lower is better)
Translates to: DRTTQMGCHIPQKMLDAHRHAHH*TQLIFV
Trigger: TACAAAAATTAACTGGGTGCAGTGGTGCGCATGCCT...GTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp AATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCCTCAGGACCCATGCTTaGGAGCCCCTGGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NTLLHLRCIKSVPRRWLVLRTHA*EPLGCC
Trigger: ACAGCAACCCAGGGGCTCCCAAGCATGGGTCCTGAG...GACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCTTAACACCAAAGCCTaGAAGAAAAGAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTLNTKA*KKRGLR
Trigger: CCTCAGGCCTCTTTTCTTCCAGGCTTTGGTGTTAAG...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTAGACCAGTGGGCATCTaGCTTTCTGAGCTACTAACT +
Preference number: 4 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTRPVGI*LSELLT
Trigger: AGTTAGTAGCTCAGAAAGCCAGATGCCCACTGGTCT...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGCTGGCAGGAGCAGATTaGATTTCCAGTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQLAGAD*ISSVIQ
Trigger: CTGGATGACACTGGAAATCCAATCTGCTCCTGCCAG...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACCGCTCAAACAACTaGCCTCTTTCCTTACCTTTC +
Preference number: 4 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDAHRSNN*PLSLPF
Trigger: GAAAGGTAAGGAAAGAGGCCAGTTGTTTGAGCGGTG...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGCCTGTATCCTCTTGGTaGCAATCTGCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQPVSSW*QSAEAR
Trigger: TCTGGCTTCAGCAGATTGCCACCAAGAGGATACAGG...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp GGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTAAAGCCTGGATTTATAAATGTCTGCCTATGTTGTTCTaGAGTTCTTGGATTGATGTT +
Preference number: 4 (lower is better)
Translates to: GGAETGGAQKTKAWIYKCLPMLF*SSWIDV
Trigger: AACATCAATCCAAGAACTTCAGAACAACATAGGCAG...ACATTTATAAATCCAGGCTTTAGTCTTCTGGGCTCCACCAGTCTCTGCCCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp TCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCCCTTCGATGCTGGGATGGTGTaGTTACCATCAGATCCCTGC +
Preference number: 4 (lower is better)
Translates to: SFTSTLHQISTKTMVSPFDAGMV*LPSDPC
Trigger: GCAGGGATCTGATGGTAATCACACCATCCCAGCATC...GAAGGGACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCTGCCTGAGATACTGTaGAGGTCTTTTGGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPLPEIL*RSFGSG
Trigger: ACCACTTCCAAAAGACCTTCACAGTATCTCAGGCAG...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCTGCATCGGAATGTACTaGCTGCTCTTCATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPCIGMY*LLFMLA
Trigger: TGCCAACATGAAGAGCAGTCAGTACATTCCGATGCA...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGATGTCCAACACAGGCTaGTCGGTCTGTAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLMSNTG*SVCRSW
Trigger: CCAGGACCTACAGACCGATCAGCCTGTGTTGGACAT...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp GGCCTGCCAATGTCCCAGCACTTCACACCTGGAACACAAGTGTTATTGCCACAAACACTTGTGTGGAGATaGGACAAGTTACTAAAAGAT +
Preference number: 4 (lower is better)
Translates to: GLPMSQHFTPGTQVLLPQTLVWR*DKLLKD
Trigger: ATCTTTTAGTAACTTGTCTCATCTCCACACAAGTGT...TTGTGGCAATAACACTTGTGTTCCAGGTGTGAAGTGCTGGGACATTGGCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTTTATGTCTTTTCTCCTaGTCTCTGACACTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTLCLFS*SLTLGE
Trigger: CTCCCCTAGTGTCAGAGATCAGGAGAAAAGACATAA...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCACGACAATGTCACTGTaGCTGGCTTTCTTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPTTMSL*LAFLLH
Trigger: GTGCAACAAGAAAGCCAGGCACAGTGACATTGTCGT...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCTCGGAATGTACTGACTaGTCTTCATGTTGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVSECTD*SSCWQY
Trigger: GTACTGCCAACATGAAGAGCAGTCAGTACATTCCGA...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp AGAAGACTAAAGCCTGGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAAACTCCTGCACATGACTaGTCGTGTTTCGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: RRLKPGFINVMSYNGDWETPAHD*SCFARH
Trigger: ATGACGTGCGAAACACGAGCAGTCATGTGCAGGAGT...TTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCATGCAACGAAGATGCTaGGATGGTGTGATTACCATC +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVMQRRC*DGVITI
Trigger: GATGGTAATCACACCATCCCAGCATCTTCGTTGCAT...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCAAAGTAAGCATCCAATaGTGCTCTCAACCTGGCACT +
Preference number: 4 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDAKVSIQ*CSQPGT
Trigger: AGTGCCAGGTTGAGAGCACCATTGGATGCTTACTTT...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp AGAAGACTAAAGCCTGGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAAATGCTTGGGAGCCCCTaGGTTGCTGTAAATTCTGAC +
Preference number: 4 (lower is better)
Translates to: RRLKPGFINVMSYNGDWEMLGSP*VAVNSD
Trigger: GTCAGAATTTACAGCAACCCAGGGGCTCCCAAGCAT...TTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATCTTAACACCAAAGCCTaGAAGAAAAGAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHLNTKA*KKRGLR
Trigger: CCTCAGGCCTCTTTTCTTCCAGGCTTTGGTGTTAAG...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCCCAGAATTGAACCATTaGCCAGTCCAGCATAGATGT +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVPELNH*PVQHRC
Trigger: ACATCTATGCTGGACTGGCCAATGGTTCAATTCTGG...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGCCAGCACTTCACACCTaGAACACAAGTGTTATTGCC +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQPALHT*NTSVIA
Trigger: GGCAATAACACTTGTGTTCCAGGTGTGAAGTGCTGG...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp ATAAACCGGACACAAGGTTCTACAGTGCCCTCTTGTGTTCAACTGAATAATACTCCACCTGTATCCTCTTaGTGGCAATCTGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: INRTQGSTVPSCVQLNNTPPVSS*WQSAEA
Trigger: GGCTTCAGCAGATTGCCACCAAGAGGATACAGGTGG...AGTATTATTCAGTTGAACACAAGAGGGCACTGTAGAACCTTGTGTCCGGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
3UTR CAA 72 bp CAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTaGATGCCCACTCACATCCTAGATGATGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: QLRWDVIFPRKC*MPTHILDDERT
Trigger: TGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATAGGATTCCTAGTCTCTaGATCATAAGTGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHRIPSL*IISGSW
Trigger: CCAGCTACCACTTATGATTCAGAGACTAGGAATCCT...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGGTTGCTCTTCTAAAATaGCAGCTCCAGATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQVALLK*QLQIPL
Trigger: CAGAGGAATCTGGAGCTGTCATTTTAGAAGAGCAAC...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCAGCATCACAGTATGCCATaGTCCGGCAGTTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PRIILMQTNHDSQCSRLQHHSMP*SGSFLP
Trigger: AGGCAGGAAACTGCCGGATCATGGCATACTGTGATG...CTGCAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATTCAAGGATACTTAAGTaGCAGGACAACTCAGATGGG +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHSRILK*QDNSDG
Trigger: CCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGA...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGGTTGGCAAAGTAGTCTaGGGCAAGGCAAAGAAATAC +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQVGKVV*GKAKKY
Trigger: GTATTTCTTTGCCTTGCCTCAGACTACTTTGCCAAC...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCAAGGAGTATCTCCTCTaGGAAAAGAGCTTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVKEYLL*EKSFSQ
Trigger: CTGAGAAAAGCTCTTTTCTCAGAGGAGATACTCCTT...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCTCTGCTGAAGCCAGATaGGTTCTGCTTTTTAATTCC +
Preference number: 4 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDASAEAR*VLLFNS
Trigger: GGAATTAAAAAGCAGAACTCATCTGGCTTCAGCAGA...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp TCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCCCTTCTTGGTGGCAATCTGCTaGAGCCAGATGAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SFTSTLHQISTKTMVSPFLVAIC*SQMSSA
Trigger: AGCAGAACTCATCTGGCTTCAGCAGATTGCCACCAA...GAAGGGACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTAAGTTGGTCATTGAATaGAACGAAGATGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTKLVIE*NEDAGM
Trigger: CATCCCAGCATCTTCGTTGCATTCAATGACCAACTT...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp TCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCCCTTCCAGAGCATCACAGTATaGCATGATCCGGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SFTSTLHQISTKTMVSPFQSITV*HDPAVS
Trigger: GGAAACTGCCGGATCATGGCATACTGTGATGCTCTG...GAAGGGACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGTACACACCAGGATGTTaGCATCATTCTCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQYTPGC*HHSLGF
Trigger: AAAGCCCAGAGAATGATGGCAACATCCTGGTGTGTA...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp TCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCCCTTCCAGCAGGGCAGAATTTaGTGCTTCATCCCCAGTACA +
Preference number: 4 (lower is better)
Translates to: SFTSTLHQISTKTMVSPFQQGRI*CFIPST
Trigger: TGTACTGGGGATGAAGCAGCAAATTCTGCCCTGCTG...GAAGGGACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCATATTCCCCAGAAAATaGTTGATGCCCACTCACATC +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVIFPRK*LMPTHI
Trigger: GATGTGAGTGGGCATCAAGCATTTTCTGGGGAATAT...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGATGCAACGAAGATGCTaGGATGGTGTGATTACCATC +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQMQRRC*DGVITI
Trigger: GATGGTAATCACACCATCCCAGCATCTTCGTTGCAT...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp AATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCAGAGGCTCAGACTTCTaGGGAGATGGCTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: NTLLHLRCIKSVPRRWLVRGSDF*GDGCLG
Trigger: CCCCAAACAGCCATCTCCCCAGAAGTCTGAGCCTCT...GACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCGCTTTCTTGTTGCACTaGGGACATTTTCGTACTTGT +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVAFLLH*GHFRTC
Trigger: ACAAGTACGAAAATGTCCCCAGTGCAACAAGAAAGC...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp AATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCGTGAGGACCTGCAGTTaGAGTCGGCACTGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: NTLLHLRCIKSVPRRWLVVRTCS*SRHCAD
Trigger: ATCAGCACAGTGCCGACTCCAACTGCAGGTCCTCAC...GACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATAAGGTCTTTTGGAAGTaGTACTTGTGCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHKVFWK*YLCLCW
Trigger: CCAGCACAAGCACAAGTACCACTTCCAAAAGACCTT...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATCGGTCTGTAGGTCCTaGAGCAACGAGCCACTGGCA +
Preference number: 4 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRSVCRS*SNEPLA
Trigger: TGCCAGTGGCTCGTTGCTCCAGGACCTACAGACCGA...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCTGAAGTTCTTGGATTaGTGTTCTCCACAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPLKFLD*CSPQCL
Trigger: AAGACACTGTGGAGAACATCAATCCAAGAACTTCAG...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGCTGAAGTTCTTGGATTaGTGTTCTCCACAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQLKFLD*CSPQCL
Trigger: AAGACACTGTGGAGAACATCAATCCAAGAACTTCAG...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCTGCCTATGTTGTTCTaGAGTTCTTGGATTGATGTT +
Preference number: 4 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTLPMLF*SSWIDV
Trigger: AACATCAATCCAAGAACTTCAGAACAACATAGGCAG...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp CCGCTCAAACAACTGGCCTCTTTCCTTACCTTTCGCAAAGCAATGAACTTAATGGAGACACCTGCTAGTTaGTCTTCTAAAATGACAGCT +
Preference number: 4 (lower is better)
Translates to: PLKQLASFLTFRKAMNLMETPAS*SSKMTA
Trigger: AGCTGTCATTTTAGAAGAGCAACTAGCAGGTGTCTC...CATTAAGTTCATTGCTTTGCGAAAGGTAAGGAAAGAGGCCAGTTGTTTGAGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCGAGACACCTGCTAGTTaGTCTTCTAAAATGACAGCT +
Preference number: 4 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPETPAS*SSKMTA
Trigger: AGCTGTCATTTTAGAAGAGCAACTAGCAGGTGTCTC...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp AGAAGACTAAAGCCTGGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAATCGGAATGTACTGACTaGTCTTCATGTTGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: RRLKPGFINVMSYNGDWESECTD*SSCWQY
Trigger: GTACTGCCAACATGAAGAGCAGTCAGTACATTCCGA...TTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGACTGTCTGAAAGTCTATaGAGCCCCCTGGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRLSESL*SPLAPR
Trigger: CCTTGGAGCCAGGGGGCTGCATAGACTTTCAGACAG...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp GGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTAAAGCCTGGATTTATAAATGTAAGCCAGATGAGTTCTaGTTTTTAATTCCAATCCTA +
Preference number: 4 (lower is better)
Translates to: GGAETGGAQKTKAWIYKCKPDEF*FLIPIL
Trigger: TAGGATTGGAATTAAAAAGCAGAACTCATCTGGCTT...ACATTTATAAATCCAGGCTTTAGTCTTCTGGGCTCCACCAGTCTCTGCCCCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATACTGTGAAGGTCTTTTaGAAGTGGTACTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHTVKVF*KWYLCL
Trigger: CAAGCACAAGTACCACTTCCAAAAGACCTTCACAGT...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp ATAAACCGGACACAAGGTTCTACAGTGCCCTCTTGTGTTCAACTGAATAATACTAGACCAGTGGGCATCTaGCTTTCTGAGCTACTAACT +
Preference number: 4 (lower is better)
Translates to: INRTQGSTVPSCVQLNNTRPVGI*LSELLT
Trigger: AGTTAGTAGCTCAGAAAGCCAGATGCCCACTGGTCT...AGTATTATTCAGTTGAACACAAGAGGGCACTGTAGAACCTTGTGTCCGGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCTCAGCACACTTCGTATaGTGGTGTGATTTTTATCAG +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVSAHFV*WCDFYQ
Trigger: CTGATAAAAATCACACCACCATACGAAGTGTGCTGA...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CCGCTCAAACAACTGGCCTCTTTCCTTACCTTTCGCAAAGCAATGAACTTAATGGTTGCCATCATTCTCTaGGCTTTGGAAAATGGCATT +
Preference number: 4 (lower is better)
Translates to: PLKQLASFLTFRKAMNLMVAIIL*ALENGI
Trigger: AATGCCATTTTCCAAAGCCCAGAGAATGATGGCAAC...CATTAAGTTCATTGCTTTGCGAAAGGTAAGGAAAGAGGCCAGTTGTTTGAGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp GACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTTCAAAGCACTAGCTTaGATAAAACCAATCCTGAGA +
Preference number: 4 (lower is better)
Translates to: DRTTQMGCHIPQKMLDAHFKALA*IKPILR
Trigger: TCTCAGGATTGGTTTTATCCAAGCTAGTGCTTTGAA...GTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCAAGCATATTCTGTTGTaGAAGTGGGTTGGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: KCLMPTHILDDERTLSKVKHILL*KWVGKV
Trigger: TACTTTGCCAACCCACTTCCACAACAGAATATGCTT...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp TGGCAAGAGATAGTGTTCTTCAAAGCACTAGCTTGGATAAAACCAATCCTGAGATATTCCATTGCTTCATaGGCCATCACTGAAACCAGC +
Preference number: 4 (lower is better)
Translates to: WQEIVFFKALAWIKPILRYSIAS*AITETS
Trigger: GCTGGTTTCAGTGATGGCTCATGAAGCAATGGAATA...TCTCAGGATTGGTTTTATCCAAGCTAGTGCTTTGAAGAACACTATCTCTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGGTCATATACCAGAATTaGACCATTGGCCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLVIYQN*TIGQSS
Trigger: GCTGGACTGGCCAATGGTTCAATTCTGGTATATGAC...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCAGTCTGTAGTGTCTCAGTaGCCTAGGGTCCTAGAATCA +
Preference number: 4 (lower is better)
Translates to: PRIILMQTNHDSQCSRLQSVVSQ*PRVLES
Trigger: TGATTCTAGGACCCTAGGTCACTGAGACACTACAGA...CTGCAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGTCACTCACGATCGTATaGATTTGCTTCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQSLTIV*ICFQNI
Trigger: GATGTTTTGGAAGCAAATTCATACGATCGTGAGTGA...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp CCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCAGCTATACCCAAAGAGATaGCCACAGCGTAATGCTGAG +
Preference number: 4 (lower is better)
Translates to: PRIILMQTNHDSQCSRLQLYPKR*PQRNAE
Trigger: CTCAGCATTACGCTGTGGGCATCTCTTTGGGTATAG...CTGCAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGACGACAATGTCACTGTaGCTGGCTTTCTTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLTTMSL*LAFLLH
Trigger: GTGCAACAAGAAAGCCAGGCACAGTGACATTGTCGT...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGGTCCACGGATCTGTTTaGCATGCATCGGAATGTACT +
Preference number: 4 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLVHGSV*HASECT
Trigger: AGTACATTCCGATGCATGGCAAACAGATCCGTGGAC...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp ATAAACCGGACACAAGGTTCTACAGTGCCCTCTTGTGTTCAACTGAATAATACTATTGGCCCTACACTGTaGTTTGAAGATGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: INRTQGSTVPSCVQLNNTIGPTL*FEDEGL
Trigger: GAGACCTTCATCTTCAAACCACAGTGTAGGGCCAAT...AGTATTATTCAGTTGAACACAAGAGGGCACTGTAGAACCTTGTGTCCGGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp TCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCCCTTCATTGGCCCTACACTGTaGTTTGAAGATGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SFTSTLHQISTKTMVSPFIGPTL*FEDEGL
Trigger: GAGACCTTCATCTTCAAACCACAGTGTAGGGCCAAT...GAAGGGACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
3UTR CAA 72 bp CACACTTGTGTGGAGATGAGACAAGTTACTAAAAGATaGTCAGCCTTCAAGGTCAGAAATAAACCGGACACA +
Preference number: 4 (lower is better)
Translates to: HTCVEMRQVTKR*SAFKVRNKPDT
Trigger: TGTGTCCGGTTTATTTCTGACCTTGAAGGCTGACAATCTTTTAGTAACTTGTCTCATCTCCACACAAGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR TCA 90 bp CCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCAGGTTGCTCTTCTAAAATaGCAGCTCCAGATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PRIILMQTNHDSQCSRLQVALLK*QLQIPL
Trigger: CAGAGGAATCTGGAGCTGTCATTTTAGAAGAGCAAC...CTGCAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGAATATGGAAATGCAGCTaGGGCAGCTCTGGGCATGTA +
Preference number: 4 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRIWKCS*GSSGHV
Trigger: TACATGCCCAGAGCTGCCTCAGCTGCATTTCCATAT...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCAGTCAAGGATACTTAAGTaGCAGGACAACTCAGATGGG +
Preference number: 4 (lower is better)
Translates to: PRIILMQTNHDSQCSRLQSRILK*QDNSDG
Trigger: CCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGA...CTGCAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGAAACCCCTCCATACTCTaGAGAGCTGTCACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRNPSIL*RAVTVR
Trigger: TCTGACAGTGACAGCTCTGCAGAGTATGGAGGGGTT...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCAGACGAAGATGCTGGGATaGTGTGATTACCATCAGATC +
Preference number: 4 (lower is better)
Translates to: PRIILMQTNHDSQCSRLQTKMLG*CDYHQI
Trigger: GATCTGATGGTAATCACACCATCCCAGCATCTTCGT...CTGCAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGAATCATAAGTGGTAGCTaGCAAGTCAGGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRIISGS*QVRLGP
Trigger: AGGACCCAGCCTGACTTGCCAGCTACCACTTATGAT...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp ATAAACCGGACACAAGGTTCTACAGTGCCCTCTTGTGTTCAACTGAATAATACTGCTTTCTTGTTGCACTaGGGACATTTTCGTACTTGT +
Preference number: 4 (lower is better)
Translates to: INRTQGSTVPSCVQLNNTAFLLH*GHFRTC
Trigger: ACAAGTACGAAAATGTCCCCAGTGCAACAAGAAAGC...AGTATTATTCAGTTGAACACAAGAGGGCACTGTAGAACCTTGTGTCCGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGAAGGTCTTTTGGAAGTaGTACTTGTGCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLKVFWK*YLCLCW
Trigger: CCAGCACAAGCACAAGTACCACTTCCAAAAGACCTT...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp ATAAACCGGACACAAGGTTCTACAGTGCCCTCTTGTGTTCAACTGAATAATACTACTGTGAAGGTCTTTTaGAAGTGGTACTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: INRTQGSTVPSCVQLNNTTVKVF*KWYLCL
Trigger: CAAGCACAAGTACCACTTCCAAAAGACCTTCACAGT...AGTATTATTCAGTTGAACACAAGAGGGCACTGTAGAACCTTGTGTCCGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CCA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGGCACACTTCGTATGGTaGTGTGATTTTTATCAGGCC +
Preference number: 4 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLAHFVW*CDFYQA
Trigger: GGCCTGATAAAAATCACACCACCATACGAAGTGTGC...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGAACGGTTCACCTCAAATaGGCAGATGTCCAACACAGG +
Preference number: 4 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRTVHLK*ADVQHR
Trigger: CCTGTGTTGGACATCTGCCCATTTGAGGTGAACCGT...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGAGTCCACGGATCTGTTTaGCATGCATCGGAATGTACT +
Preference number: 4 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRVHGSV*HASECT
Trigger: AGTACATTCCGATGCATGGCAAACAGATCCGTGGAC...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGAGATGAAGTTGGTCATTaGATGCAACGAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRDEVGH*MQRRCW
Trigger: CCAGCATCTTCGTTGCATTCAATGACCAACTTCATC...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR TCA 90 bp ATAAACCGGACACAAGGTTCTACAGTGCCCTCTTGTGTTCAACTGAATAATACTAAACAGCTCTTGAATTaGCAGGTCAGAAGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: INRTQGSTVPSCVQLNNTKQLLN*QVRSVL
Trigger: TAAAACACTTCTGACCTGTCAATTCAAGAGCTGTTT...AGTATTATTCAGTTGAACACAAGAGGGCACTGTAGAACCTTGTGTCCGGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp AATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCAAGTTGGTCATTGAATaGAACGAAGATGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: NTLLHLRCIKSVPRRWLVKLVIE*NEDAGM
Trigger: CATCCCAGCATCTTCGTTGCATTCAATGACCAACTT...GACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGAAAAGTAAGCATCCAATaGTGCTCTCAACCTGGCACT +
Preference number: 4 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRKVSIQ*CSQPGT
Trigger: AGTGCCAGGTTGAGAGCACCATTGGATGCTTACTTT...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp AATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCGTTGCCATCATTCTCTaGGCTTTGGAAAATGGCATT +
Preference number: 4 (lower is better)
Translates to: NTLLHLRCIKSVPRRWLVVAIIL*ALENGI
Trigger: AATGCCATTTTCCAAAGCCCAGAGAATGATGGCAAC...GACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGTCACTCATCTTTTCCTaGCAAGAGATAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLSLIFS*QEIVFF
Trigger: GAAGAACACTATCTCTTGCCAGGAAAAGATGAGTGA...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR GCA 90 bp AATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCTTACCATCAGATCCCTaGCTATGTTGTTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: NTLLHLRCIKSVPRRWLVLPSDP*LCCSEV
Trigger: AACTTCAGAACAACATAGGCAGGGATCTGATGGTAA...GACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGAACATCATATTCCATTaGTTCATGAGCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLNIIFH*FMSHHC
Trigger: ACAGTGATGGCTCATGAAGCAATGGAATATGATGTT...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571750.5
CDS-3UTR GCA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCTTTTACATCTACGTTaGATCAAATCAGTACCAAGA +
Preference number: 4 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLLLHLR*IKSVPR
Trigger: TCTTGGTACTGATTTGATGCAACGTAGATGTAAAAG...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp AATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCCTGGGCTTTGGAAAATaGCATTTTTGGTCAATAGTT +
Preference number: 4 (lower is better)
Translates to: NTLLHLRCIKSVPRRWLVLGFGK*HFWSIV
Trigger: AACTATTGACCAAAAATGCCATTTTCCAAAGCCCAG...GACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CCA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGACTGGGCTTTGGAAAATaGCATTTTTGGTCAATAGTT +
Preference number: 4 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRLGFGK*HFWSIV
Trigger: AACTATTGACCAAAAATGCCATTTTCCAAAGCCCAG...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR GCA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGACTTTTACATCTACGTTaGATCAAATCAGTACCAAGA +
Preference number: 4 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRLLHLR*IKSVPR
Trigger: TCTTGGTACTGATTTGATGCAACGTAGATGTAAAAG...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS TCA 90 bp GCTGAGGCAGGAGAACCCCTTGAACCCGGAGAGTGGAGGTTACATTaGGCCGAGATCACGCCACTGCACTCCAGACCGGGAGAGAGAGTA +
Preference number: 5 (lower is better)
Translates to: AEAGEPLEPGEWRLH*AEITPLHSRPGERV
Trigger: TACTCTCTCTCCCGGTCTGGAGTGCAGTGGCGTGATCTCGGCTCAATGTAACCTCCACTCTCCGGGTTCAAGGGGTTCTCCTGCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000571750.5
ENST00000572337.5
ENST00000572840.1
ENST00000575113.1
ENST00000575397.5
CDS-3UTR CAA 90 bp TCTTGCTTGGGGCTGCTAGGCGCTAGCAAACAACATCTAACCAGCAGCATGCCTGCTCAGGACCCATGCTaGGGAGCCCCTGGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: SCLGLLGASKQHLTSSMPAQDPC*GAPGLL
Trigger: CAGCAACCCAGGGGCTCCCAAGCATGGGTCCTGAGC...AGGCATGCTGCTGGTTAGATGTTGTTTGCTAGCGCCTAGCAGCCCCAAGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCGAGGGCTGGTCCCCCTaGGCTGCTGGCCATGCCAGC +
Preference number: 5 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSEGWSP*AAGHAS
Trigger: GCTGGCATGGCCAGCAGCCAAGGGGGACCAGCCCTC...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCGAGGGCTGGTCCCCCTaGGCTGCTGGCCATGCCAGC +
Preference number: 5 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDAEGWSP*AAGHAS
Trigger: GCTGGCATGGCCAGCAGCCAAGGGGGACCAGCCCTC...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp GGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTAAAGCCTGGATTTATAAATGTGCTCAGGACCCATGCTaGGGAGCCCCTGGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: GGAETGGAQKTKAWIYKCAQDPC*GAPGLL
Trigger: CAGCAACCCAGGGGCTCCCAAGCATGGGTCCTGAGC...ACATTTATAAATCCAGGCTTTAGTCTTCTGGGCTCCACCAGTCTCTGCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp GGTGGGGCAGAGACTGGTGGAGCCCAGAAGACTAAAGCCTGGATTTATAAATGTGAGACCCTCCGGCTCTaGCCCTCCGTGAAGCAGATA +
Preference number: 5 (lower is better)
Translates to: GGAETGGAQKTKAWIYKCETLRL*PSVKQI
Trigger: TATCTGCTTCACGGAGGGCAAGAGCCGGAGGGTCTC...ACATTTATAAATCCAGGCTTTAGTCTTCTGGGCTCCACCAGTCTCTGCCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS GCA 90 bp ACTTGTCCTTTAAGCCACGTGGAAATGCACCTATACCCAAAGAGATaGCCACAGCGTAATGCTGAGAGCCGGTGGTCCCCAGCATTGGTC +
Preference number: 5 (lower is better)
Translates to: TCPLSHVEMHLYPKR*PQRNAESRWSPALV
Trigger: GACCAATGCTGGGGACCACCGGCTCTCAGCATTACGCTGTGGGCATCTCTTTGGGTATAGGTGCATTTCCACGTGGCTTAAAGGACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000575281.1
CDS CCA 90 bp ACAGTGCCGGGAGCTGTTCTCTGTCTGAAAGTCTATGCAGCCCCCTaGCTCCAAGGGCAGCACATGAGGCCAATGAGAAAAGTCCATTTT +
Preference number: 5 (lower is better)
Translates to: TVPGAVLCLKVYAAP*LQGQHMRPMRKVHF
Trigger: AAAATGGACTTTTCTCATTGGCCTCATGTGCTGCCCTTGGAGCCAGGGGGCTGCATAGACTTTCAGACAGAGAACAGCTCCCGGCACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCTTGCTTGGGGCTGCTAGGCGCTAGCAAACAACATCTAACCAGCAGCATGCCTACAGCAGGGCAGAATTaGCTGCTTCATCCCCAGTAC +
Preference number: 5 (lower is better)
Translates to: SCLGLLGASKQHLTSSMPTAGQN*LLHPQY
Trigger: GTACTGGGGATGAAGCAGCAAATTCTGCCCTGCTGT...AGGCATGCTGCTGGTTAGATGTTGTTTGCTAGCGCCTAGCAGCCCCAAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS TCA 90 bp CTTAACACCAAAGCCTGGAAGAAAAGAGGCCTGAGGAGAAGGCTGTaGTATCACCAGGCAGCTCAGAGCATCACAGTATGCCATGATCCG +
Preference number: 5 (lower is better)
Translates to: LNTKAWKKRGLRRRL*YHQAAQSITVCHDP
Trigger: CGGATCATGGCATACTGTGATGCTCTGAGCTGCCTGGTGATATCACAGCCTTCTCCTCAGGCCTCTTTTCTTCCAGGCTTTGGTGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS GCA 90 bp GACAGCTCCAGATTCCTCTGCCTGGTCAACAACCCCTCCATACTCTaGAGAGCTGTCACTGTCAGAATCAGAACTACTAGACACCTGCAA +
Preference number: 5 (lower is better)
Translates to: DSSRFLCLVNNPSIL*RAVTVRIRTTRHLQ
Trigger: TTGCAGGTGTCTAGTAGTTCTGATTCTGACAGTGACAGCTCTGCAGAGTATGGAGGGGTTGTTGACCAGGCAGAGGAATCTGGAGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000572337.5
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGGTCAACAGACAGTaGCGGAGCAGGCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPQVNRQ*RSRLEQ
Trigger: CTGCTCCAGCCTGCTCCGCAACTGTCTGTTGACCTG...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATGAGACCCTCCGGCTCTaGCCCTCCGTGAAGCAGATA +
Preference number: 5 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHETLRL*PSVKQI
Trigger: TATCTGCTTCACGGAGGGCAAGAGCCGGAGGGTCTC...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCTGGGGAGATGGCTGTTaGGGGAGGGTCTTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPWGDGC*GRVLPP
Trigger: TGGAGGCAAGACCCTCCCCAAACAGCCATCTCCCCA...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCTTGCTTGGGGCTGCTAGGCGCTAGCAAACAACATCTAACCAGCAGCATGCCTGGGACATTTTCGTACTaGTCCTTTAAGCCACGTGGA +
Preference number: 5 (lower is better)
Translates to: SCLGLLGASKQHLTSSMPGTFSY*SFKPRG
Trigger: TCCACGTGGCTTAAAGGACAAGTACGAAAATGTCCC...AGGCATGCTGCTGGTTAGATGTTGTTTGCTAGCGCCTAGCAGCCCCAAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCAAGTGGTACTTGTGCTaGTGCTGGCCCTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KCLMPTHILDDERTLSKVKWYLC*CWPWLE
Trigger: CTCCAGCCAGGGCCAGCACAAGCACAAGTACCACTT...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS TCA 90 bp CAGCTCAGAGCATCACAGTATGCCATGATCCGGCAGTTTCCTGCCTaGGATACTGTGAAGGTCTTTTGGAAGTGGTACTTGTGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: QLRASQYAMIRQFPA*DTVKVFWKWYLCLC
Trigger: GCACAAGCACAAGTACCACTTCCAAAAGACCTTCACAGTATCTCAGGCAGGAAACTGCCGGATCATGGCATACTGTGATGCTCTGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS GCA 90 bp CAGGCAGCTCAGAGCATCACAGTATGCCATGATCCGGCAGTTTCCTaGCTGAGATACTGTGAAGGTCTTTTGGAAGTGGTACTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: QAAQSITVCHDPAVS*LRYCEGLLEVVLVL
Trigger: AAGCACAAGTACCACTTCCAAAAGACCTTCACAGTATCTCAGGCAGGAAACTGCCGGATCATGGCATACTGTGATGCTCTGAGCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS GCA 90 bp CCAGTGGGCATCTGGCTTTCTGAGCTACTAACTCCTGCACATGACTaGTCGTGTTTCGCACGTCATATACCAGAATTGAACCATTGGCCA +
Preference number: 5 (lower is better)
Translates to: PVGIWLSELLTPAHD*SCFARHIPELNHWP
Trigger: TGGCCAATGGTTCAATTCTGGTATATGACGTGCGAAACACGAGCAGTCATGTGCAGGAGTTAGTAGCTCAGAAAGCCAGATGCCCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000575154.1
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCGGTGGTCCCCAGCATaGGTCCACTGTTCCAGACAT +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPRWSPA*VHCSRH
Trigger: ATGTCTGGAACAGTGGACCAATGCTGGGGACCACCG...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCAAGTGGTACTTGTGCTaGTGCTGGCCCTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPKWYLC*CWPWLE
Trigger: CTCCAGCCAGGGCCAGCACAAGCACAAGTACCACTT...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp CAGGTACTTCAAAGAAAGTCAAATCCTAAGCCTGCCCAGGCCCAAAGACAAAGCGCTGGCAGGAGCAGATaGGATTTCCAGTGTCATCCA +
Preference number: 5 (lower is better)
Translates to: QVLQRKSNPKPAQAQRQSAGRSR*DFQCHP
Trigger: TGGATGACACTGGAAATCCAATCTGCTCCTGCCAGC...GCTTTGTCTTTGGGCCTGGGCAGGCTTAGGATTTGACTTTCTTTGAAGTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAACAGGGATCTTGCTaGGGGCTGCTAGGCGCTAGC +
Preference number: 5 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQKQGSC*GLLGAS
Trigger: GCTAGCGCCTAGCAGCCCCAAGCAAGATCCCTGTTT...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS TCA 90 bp CAGCATGCCATGAAGTCTCTGCAGTCCGCTGATGAAGTTGGTCATTaGATGCAACGAAGATGCTGGGATGGTGTGATTACCATCAGATCC +
Preference number: 5 (lower is better)
Translates to: QHAMKSLQSADEVGH*MQRRCWDGVITIRS
Trigger: GGATCTGATGGTAATCACACCATCCCAGCATCTTCGTTGCATTCAATGACCAACTTCATCAGCGGACTGCAGAGACTTCATGGCATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000572990.5
ENST00000575397.5
CDS GCA 90 bp GGCTGTTTGGGGAGGGTCTTGCCTCCATCGATACATGTAACTTCTTaGTCTGCTGAGACACCTGCTAGTTGCTCTTCTAAAATGACAGCT +
Preference number: 5 (lower is better)
Translates to: GCLGRVLPPSIHVTS*SAETPASCSSKMTA
Trigger: AGCTGTCATTTTAGAAGAGCAACTAGCAGGTGTCTCAGCAGAGCAAGAAGTTACATGTATCGATGGAGGCAAGACCCTCCCCAAACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000572337.5
CDS-3UTR CAA 90 bp AGAGGTAGTGACAAAGGAATATGGTGGGGCAGAGACTGGTGGAGCCCAGAAGACGAACATCATATTCCATaGCTTCATGAGCCATCACTG +
Preference number: 5 (lower is better)
Translates to: RGSDKGIWWGRDWWSPEDEHHIP*LHEPSL
Trigger: CAGTGATGGCTCATGAAGCAATGGAATATGATGTTC...GTCTTCTGGGCTCCACCAGTCTCTGCCCCACCATATTCCTTTGTCACTACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCAGGGGTGGTGTCGCTaGGCTGCTGATCACCTCAGC +
Preference number: 5 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLQGWCR*AADHLS
Trigger: GCTGAGGTGATCAGCAGCCAAGCGACACCACCCCTG...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp ATAAACCGGACACAAGGTTCTACAGTGCCCTCTTGTGTTCAACTGAATAATACTCAGGTCAACAGACAGTaGCGGAGCAGGCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: INRTQGSTVPSCVQLNNTQVNRQ*RSRLEQ
Trigger: CTGCTCCAGCCTGCTCCGCAACTGTCTGTTGACCTG...AGTATTATTCAGTTGAACACAAGAGGGCACTGTAGAACCTTGTGTCCGGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp TCTTGCTTGGGGCTGCTAGGCGCTAGCAAACAACATCTAACCAGCAGCATGCCTTCTGAAGTTCTTGGATaGATGTTCTCCACAGTGTCT +
Preference number: 5 (lower is better)
Translates to: SCLGLLGASKQHLTSSMPSEVLG*MFSTVS
Trigger: AGACACTGTGGAGAACATCAATCCAAGAACTTCAGA...AGGCATGCTGCTGGTTAGATGTTGTTTGCTAGCGCCTAGCAGCCCCAAGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCTTGCTTGGGGCTGCTAGGCGCTAGCAAACAACATCTAACCAGCAGCATGCCTACTGTTCCAGACATATaGTACAAGTGTCCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SCLGLLGASKQHLTSSMPTVPDI*YKCPLL
Trigger: AAGAAGGGGACACTTGTACAATATGTCTGGAACAGT...AGGCATGCTGCTGGTTAGATGTTGTTTGCTAGCGCCTAGCAGCCCCAAGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp AGAAGACTAAAGCCTGGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAACGGTGGTCCCCAGCATaGGTCCACTGTTCCAGACAT +
Preference number: 5 (lower is better)
Translates to: RRLKPGFINVMSYNGDWERWSPA*VHCSRH
Trigger: ATGTCTGGAACAGTGGACCAATGCTGGGGACCACCG...TTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp AGAGGTAGTGACAAAGGAATATGGTGGGGCAGAGACTGGTGGAGCCCAGAAGACGTCAGTTTAATAGTGTaGTCTAGGGAAGCAGAGAGT +
Preference number: 5 (lower is better)
Translates to: RGSDKGIWWGRDWWSPEDVSLIV*SREAES
Trigger: ACTCTCTGCTTCCCTAGACAACACTATTAAACTGAC...GTCTTCTGGGCTCCACCAGTCTCTGCCCCACCATATTCCTTTGTCACTACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp TCTTGCTTGGGGCTGCTAGGCGCTAGCAAACAACATCTAACCAGCAGCATGCCTGTCAGTTTAATAGTGTaGTCTAGGGAAGCAGAGAGT +
Preference number: 5 (lower is better)
Translates to: SCLGLLGASKQHLTSSMPVSLIV*SREAES
Trigger: ACTCTCTGCTTCCCTAGACAACACTATTAAACTGAC...AGGCATGCTGCTGGTTAGATGTTGTTTGCTAGCGCCTAGCAGCCCCAAGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTACAGCAGGGCAGAATTaGCTGCTTCATCCCCAGTAC +
Preference number: 5 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTTAGQN*LLHPQY
Trigger: GTACTGGGGATGAAGCAGCAAATTCTGCCCTGCTGT...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp AGAAGACTAAAGCCTGGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAAAAACAGGGATCTTGCTaGGGGCTGCTAGGCGCTAGC +
Preference number: 5 (lower is better)
Translates to: RRLKPGFINVMSYNGDWEKQGSC*GLLGAS
Trigger: GCTAGCGCCTAGCAGCCCCAAGCAAGATCCCTGTTT...TTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS TCA 90 bp CTCCTGCACATGACTGCTCGTGTTTCGCACGTCATATACCAGAATTaGACCATTGGCCAGTCCAGCATAGATGTAGTTAGCCTCATCAAG +
Preference number: 5 (lower is better)
Translates to: LLHMTARVSHVIYQN*TIGQSSIDVVSLIK
Trigger: CTTGATGAGGCTAACTACATCTATGCTGGACTGGCCAATGGTTCAATTCTGGTATATGACGTGCGAAACACGAGCAGTCATGTGCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000575154.1
CDS-3UTR CAA 90 bp AGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCTGCCTGGCTTTCTTGTaGCACTGGGGACATTTTCGT +
Preference number: 5 (lower is better)
Translates to: SDRTTQMGCHIPQKMLDACLAFL*HWGHFR
Trigger: ACGAAAATGTCCCCAGTGCAACAAGAAAGCCAGGCA...GGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGTTTTGGAAGTGGTACTaGTGCTTGTGCTGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQFWKWY*CLCWPW
Trigger: CCAGGGCCAGCACAAGCACAAGTACCACTTCCAAAA...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCTTTTGGAAGTGGTACTaGTGCTTGTGCTGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPFWKWY*CLCWPW
Trigger: CCAGGGCCAGCACAAGCACAAGTACCACTTCCAAAA...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATTCTGGACCACGGTATTaGTCTCCAGGCTGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHSGPRY*SPGWSV
Trigger: AACTGACCAGCCTGGAGACAAATACCGTGGTCCAGA...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS TCA 90 bp TGCTGGGATGGTGTGATTACCATCAGATCCCTGCCTATGTTGTTCTaGAGTTCTTGGATTGATGTTCTCCACAGTGTCTTCTCCCAAGAC +
Preference number: 5 (lower is better)
Translates to: CWDGVITIRSLPMLF*SSWIDVLHSVFSQD
Trigger: GTCTTGGGAGAAGACACTGTGGAGAACATCAATCCAAGAACTTCAGAACAACATAGGCAGGGATCTGATGGTAATCACACCATCCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000572990.5
ENST00000575113.1
ENST00000575397.5
ENST00000576652.1
CDS TCA 90 bp CTAAACGCCAGTCCACGGATCTGTTTGCCATGCATCGGAATGTACTaGCTGCTCTTCATGTTGGCAGTACTCAACATCTTAACACCAAAG +
Preference number: 5 (lower is better)
Translates to: LNASPRICLPCIGMY*LLFMLAVLNILTPK
Trigger: CTTTGGTGTTAAGATGTTGAGTACTGCCAACATGAAGAGCAGTCAGTACATTCCGATGCATGGCAAACAGATCCGTGGACTGGCGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000575154.1
CDS GCA 90 bp TTTATTTCCACCTATGAGGAACTGGGGGTCAGAAGTTACCTGACTTaGCAAAAGTCACACTGTCAGTCCTTGAATGGCAGAGCCTCAGTT +
Preference number: 5 (lower is better)
Translates to: FISTYEELGVRSYLT*QKSHCQSLNGRASV
Trigger: AACTGAGGCTCTGCCATTCAAGGACTGACAGTGTGACTTTTGGCAAGTCAGGTAACTTCTGACCCCCAGTTCCTCATAGGTGGAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571776.1
ENST00000575397.5
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCGCCCTACACTGTGGTTaGAAGATGAAGGTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPALHCG*KMKVSG
Trigger: TCCTGAGACCTTCATCTTCAAACCACAGTGTAGGGC...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCGGGACATTTTCGTACTaGTCCTTTAAGCCACGTGGA +
Preference number: 5 (lower is better)
Translates to: KCLMPTHILDDERTLSKVGTFSY*SFKPRG
Trigger: TCCACGTGGCTTAAAGGACAAGTACGAAAATGTCCC...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCTGCCTGGCTTTCTTGTaGCACTGGGGACATTTTCGT +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPCLAFL*HWGHFR
Trigger: ACGAAAATGTCCCCAGTGCAACAAGAAAGCCAGGCA...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATCTGTGCCTGGCTTTCTaGTTGCACTGGGGACATTTT +
Preference number: 5 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHLCLAF*LHWGHF
Trigger: AAAATGTCCCCAGTGCAACAAGAAAGCCAGGCACAG...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCTGTGCCTGGCTTTCTaGTTGCACTGGGGACATTTT +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPLCLAF*LHWGHF
Trigger: AAAATGTCCCCAGTGCAACAAGAAAGCCAGGCACAG...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCGTCCTGAACACGCCTTaGAAGCCTAGTGCACTTATC +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPVLNTP*KPSALI
Trigger: GATAAGTGCACTAGGCTTCAAAGGCGTGTTCAGGAC...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATAGTCCACGGATCTGTTaGCCATGCATCGGAATGTAC +
Preference number: 5 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHSPRIC*PCIGMY
Trigger: GTACATTCCGATGCATGGCAAACAGATCCGTGGACT...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCAGTCCACGGATCTGTTaGCCATGCATCGGAATGTAC +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPSPRIC*PCIGMY
Trigger: GTACATTCCGATGCATGGCAAACAGATCCGTGGACT...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp AGAAGACTAAAGCCTGGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAATCTGGACCACGGTATTaGTCTCCAGGCTGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: RRLKPGFINVMSYNGDWESGPRY*SPGWSV
Trigger: AACTGACCAGCCTGGAGACAAATACCGTGGTCCAGA...TTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCGTACACACCAGGATGTaGCCATCATTCTCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPVHTRM*PSFSGL
Trigger: AAGCCCAGAGAATGATGGCAACATCCTGGTGTGTAC...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS TCA 90 bp GATTACCATCAGATCCCTGCCTATGTTGTTCTGAAGTTCTTGGATTaGTGTTCTCCACAGTGTCTTCTCCCAAGACCTCCACTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: DYHQIPAYVVLKFLD*CSPQCLLPRPPLLS
Trigger: TGACAGAAGTGGAGGTCTTGGGAGAAGACACTGTGGAGAACATCAATCCAAGAACTTCAGAACAACATAGGCAGGGATCTGATGGTAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000572990.5
ENST00000575113.1
ENST00000575397.5
ENST00000576652.1
CDS-3UTR CAA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCAGTCCGCTGATGAAGTaGGTCATTGAATGCAACGAA +
Preference number: 5 (lower is better)
Translates to: KCLMPTHILDDERTLSKVSPLMK*VIECNE
Trigger: TTCGTTGCATTCAATGACCAACTTCATCAGCGGACT...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGGGAGATGGCTGTTaGGGGAGGGTCTTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRWGDGC*GRVLPP
Trigger: TGGAGGCAAGACCCTCCCCAAACAGCCATCTCCCCA...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp AGAAGACTAAAGCCTGGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAAGTACACACCAGGATGTaGCCATCATTCTCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: RRLKPGFINVMSYNGDWEVHTRM*PSFSGL
Trigger: AAGCCCAGAGAATGATGGCAACATCCTGGTGTGTAC...TTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp CCGCTCAAACAACTGGCCTCTTTCCTTACCTTTCGCAAAGCAATGAACTTAATGTTCCCCAGAAAATGCTaGATGCCCACTCACATCCTA +
Preference number: 5 (lower is better)
Translates to: PLKQLASFLTFRKAMNLMFPRKC*MPTHIL
Trigger: TAGGATGTGAGTGGGCATCAAGCATTTTCTGGGGAA...CATTAAGTTCATTGCTTTGCGAAAGGTAAGGAAAGAGGCCAGTTGTTTGAGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp CTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCCAGTTCCCCAGAAAATGCTaGATGCCCACTCACATCCTA +
Preference number: 5 (lower is better)
Translates to: LQGYLSDRTTQMGCHIPQFPRKC*MPTHIL
Trigger: TAGGATGTGAGTGGGCATCAAGCATTTTCTGGGGAA...CTGGGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp GACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACCTTCAAAGCACTAGCTaGGATAAAACCAATCCTGAG +
Preference number: 5 (lower is better)
Translates to: DRTTQMGCHIPQKMLDAHLQSTS*DKTNPE
Trigger: CTCAGGATTGGTTTTATCCAAGCTAGTGCTTTGAAG...GTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS TCA 90 bp CTGATGAAGTTGGTCATTGAATGCAACGAAGATGCTGGGATGGTGTaGTTACCATCAGATCCCTGCCTATGTTGTTCTGAAGTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: LMKLVIECNEDAGMV*LPSDPCLCCSEVLG
Trigger: TCCAAGAACTTCAGAACAACATAGGCAGGGATCTGATGGTAATCACACCATCCCAGCATCTTCGTTGCATTCAATGACCAACTTCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000572990.5
ENST00000575397.5
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCAGTCCGCTGATGAAGTaGGTCATTGAATGCAACGAA +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPSPLMK*VIECNE
Trigger: TTCGTTGCATTCAATGACCAACTTCATCAGCGGACT...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCCCTTCGCCCTACACTGTGGTTaGAAGATGAAGGTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: SFTSTLHQISTKTMVSPFALHCG*KMKVSG
Trigger: TCCTGAGACCTTCATCTTCAAACCACAGTGTAGGGC...GAAGGGACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TGGCAAGAGATAGTGTTCTTCAAAGCACTAGCTTGGATAAAACCAATCCTGAGACAGATACCCTCCTTCTaGTTCTCATTGGCCCTACAC +
Preference number: 5 (lower is better)
Translates to: WQEIVFFKALAWIKPILRQIPSF*FSLALH
Trigger: GTGTAGGGCCAATGAGAACAAGAAGGAGGGTATCTG...TCTCAGGATTGGTTTTATCCAAGCTAGTGCTTTGAAGAACACTATCTCTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp TGGCAAGAGATAGTGTTCTTCAAAGCACTAGCTTGGATAAAACCAATCCTGAGATGTTTGGGGAGGGTCTaGCCTCCATCGATACATGTA +
Preference number: 5 (lower is better)
Translates to: WQEIVFFKALAWIKPILRCLGRV*PPSIHV
Trigger: TACATGTATCGATGGAGGCAAGACCCTCCCCAAACA...TCTCAGGATTGGTTTTATCCAAGCTAGTGCTTTGAAGAACACTATCTCTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp ACAGGACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTTACTGTGAAGGTCTTTaGGAAGTGGTACTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: TGQLRWDVIFPRKCLMPTYCEGL*EVVLVL
Trigger: AAGCACAAGTACCACTTCCAAAAGACCTTCACAGTA...AGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp AGAAGACTAAAGCCTGGATTTATAAATGTGATGTCCTACAACGGGGACTGGGAACGTCATATACCAGAATaGAACCATTGGCCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: RRLKPGFINVMSYNGDWERHIPE*NHWPVQ
Trigger: CTGGACTGGCCAATGGTTCAATTCTGGTATATGACG...TTCCCAGTCCCCGTTGTAGGACATCACATTTATAAATCCAGGCTTTAGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGGCTGGCAGGAGCAGATaGGATTTCCAGTGTCATCCA +
Preference number: 5 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLAGRSR*DFQCHP
Trigger: TGGATGACACTGGAAATCCAATCTGCTCCTGCCAGC...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCAGATACCCTCCTTCTaGTTCTCATTGGCCCTACAC +
Preference number: 5 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLQIPSF*FSLALH
Trigger: GTGTAGGGCCAATGAGAACAAGAAGGAGGGTATCTG...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCACTGTTCCAGACATATaGTACAAGTGTCCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPTVPDI*YKCPLL
Trigger: AAGAAGGGGACACTTGTACAATATGTCTGGAACAGT...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGGTCCTGAACACGCCTTaGAAGCCTAGTGCACTTATC +
Preference number: 5 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLVLNTP*KPSALI
Trigger: GATAAGTGCACTAGGCTTCAAAGGCGTGTTCAGGAC...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp AAATGCTTGATGCCCACTCACATCCTAGATGATGAGAGGACACTCTCTAAGGTCCAAGTTACTAAAAGATaGTCAGCCTTCAAGGTCAGA +
Preference number: 5 (lower is better)
Translates to: KCLMPTHILDDERTLSKVQVTKR*SAFKVR
Trigger: TCTGACCTTGAAGGCTGACAATCTTTTAGTAACTTG...GACCTTAGAGAGTGTCCTCTCATCATCTAGGATGTGAGTGGGCATCAAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp GGTCCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGGGAACACAAGTGTTATaGCCACAAAGCACACCCAGG +
Preference number: 5 (lower is better)
Translates to: GPRIILMQTNHDSQCSRLGTQVL*PQSTPR
Trigger: CCTGGGTGTGCTTTGTGGCAATAACACTTGTGTTCC...CAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATTTGAAGCATATTCTGTaGTGGAAGTGGGTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHLKHIL*WKWVGK
Trigger: TTTGCCAACCCACTTCCACAACAGAATATGCTTCAA...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp AATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCTGTTTGGGGAGGGTCTaGCCTCCATCGATACATGTA +
Preference number: 5 (lower is better)
Translates to: NTLLHLRCIKSVPRRWLVCLGRV*PPSIHV
Trigger: TACATGTATCGATGGAGGCAAGACCCTCCCCAAACA...GACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGGTTAGTCCCTTCTCTGAAGTTCTTGGATaGATGTTCTCCACAGTGTCT +
Preference number: 5 (lower is better)
Translates to: SFTSTLHQISTKTMVSPFSEVLG*MFSTVS
Trigger: AGACACTGTGGAGAACATCAATCCAAGAACTTCAGA...GAAGGGACTAACCATCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCTTTTTGGTCAATAGTTaGCAAGTAGGTCCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPFLVNS*QVGPPK
Trigger: TTTTGGAGGACCTACTTGCAAACTATTGACCAAAAA...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp ACAACTCAGATGGGATGTCATATTCCCCAGAAAATGCTTGATGCCCACTCACATTCTTTTACATCTACGTaGCATCAAATCAGTACCAAG +
Preference number: 5 (lower is better)
Translates to: TTQMGCHIPQKMLDAHSHSFTST*HQISTK
Trigger: CTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA...ATGTGAGTGGGCATCAAGCATTTTCTGGGGAATATGACATCCCATCTGAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp TCCCTTCAAGGATACTTAAGTGACAGGACAACTCAGATGGGATGTCATATTCCCTCTTTTACATCTACGTaGCATCAAATCAGTACCAAG +
Preference number: 5 (lower is better)
Translates to: SLQGYLSDRTTQMGCHIPSFTST*HQISTK
Trigger: CTTGGTACTGATTTGATGCAACGTAGATGTAAAAGA...GGGAATATGACATCCCATCTGAGTTGTCCTGTCACTTAAGTATCCTTGAAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS TCA 90 bp AGACTTGCAAGTGAAGAAAGAATTTTTGGTGTACAAGACACAATCTaGACAACAGCCAATCTCTACAGAGATTGCCAACAAACTACCACC +
Preference number: 5 (lower is better)
Translates to: RLASEERIFGVQDTI*TTANLYRDCQQTTT
Trigger: GGTGGTAGTTTGTTGGCAATCTCTGTAGAGATTGGCTGTTGTTCAGATTGTGTCTTGTACACCAAAAATTCTTTCTTCACTTGCAAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571776.1
CDS-3UTR CAA 90 bp CCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCAGGAACATCATATTCCATaGCTTCATGAGCCATCACTG +
Preference number: 5 (lower is better)
Translates to: PRIILMQTNHDSQCSRLQEHHIP*LHEPSL
Trigger: CAGTGATGGCTCATGAAGCAATGGAATATGATGTTC...CTGCAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp CCTAGAATCATACTAATGCAAACAAACCATGATTCCCAATGTTCTAGACTGCAGTACTGTGAAGGTCTTTaGGAAGTGGTACTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: PRIILMQTNHDSQCSRLQYCEGL*EVVLVL
Trigger: AAGCACAAGTACCACTTCCAAAAGACCTTCACAGTA...CTGCAGTCTAGAACATTGGGAATCATGGTTTGTTTGCATTAGTATGATTCTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGACGTCATATACCAGAATaGAACCATTGGCCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRRHIPE*NHWPVQ
Trigger: CTGGACTGGCCAATGGTTCAATTCTGGTATATGACG...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS-3UTR CAA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATGTGCTATCACACACTaGTGTGGAGATGAGACAAGT +
Preference number: 5 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRCAITH*CGDETS
Trigger: ACTTGTCTCATCTCCACACAAGTGTGTGATAGCACA...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp ATAAACCGGACACAAGGTTCTACAGTGCCCTCTTGTGTTCAACTGAATAATACTCACGATCGTATGAATTaGCTTCCAAAACATCCAAAT +
Preference number: 5 (lower is better)
Translates to: INRTQGSTVPSCVQLNNTHDRMN*LPKHPN
Trigger: ATTTGGATGTTTTGGAAGCAAATTCATACGATCGTG...AGTATTATTCAGTTGAACACAAGAGGGCACTGTAGAACCTTGTGTCCGGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361070.9
CDS-3UTR CAA 90 bp CAACTGAATAATACTCTTTTACATCTACGTTGCATCAAATCAGTACCAAGACGATTTTTGGTCAATAGTTaGCAAGTAGGTCCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: QLNNTLLHLRCIKSVPRRFLVNS*QVGPPK
Trigger: TTTTGGAGGACCTACTTGCAAACTATTGACCAAAAA...TCGTCTTGGTACTGATTTGATGCAACGTAGATGTAAAAGAGTATTATTCAGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS CCA 72 bp TGGTGTCGCTTGGCTGCTGATCACCTCAGCAGGAGCTaGCTGGAGGATGGATGGTACCCCCTGGCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: WCRLAADHLSRS*LEDGWYPLAAD
Trigger: GTCAGCAGCCAGGGGGTACCATCCATCCTCCAGCCAGCTCCTGCTGAGGTGATCAGCAGCCAAGCGACACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000572990.5
ENST00000575113.1
ENST00000575397.5
ENST00000576652.1
CDS GCA 72 bp CCCAAGACCTCCACTTCTGTCAGGTCAACAGACAGTTaGGGAGCAGGCTGGAGCAGGGGTGGTGTCGCTTGG +
Preference number: 6 (lower is better)
Translates to: PKTSTSVRSTDS*GAGWSRGGVAW
Trigger: CCAAGCGACACCACCCCTGCTCCAGCCTGCTCCGCAACTGTCTGTTGACCTGACAGAAGTGGAGGTCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000572990.5
ENST00000575113.1
ENST00000575397.5
ENST00000576652.1
CDS GCA 72 bp GACAGTGCCGGGAGCTGTTCTCTGTCTGAAAGTCTATaGAGCCCCCTGGCTCCAAGGGCAGCACATGAGGCC +
Preference number: 6 (lower is better)
Translates to: DSAGSCSLSESL*SPLAPRAAHEA
Trigger: GGCCTCATGTGCTGCCCTTGGAGCCAGGGGGCTGCATAGACTTTCAGACAGAGAACAGCTCCCGGCACTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS TCA 72 bp GGAGAACCCCTTGAACCCGGAGAGTGGAGGTTACATTaGGCCGAGATCACGCCACTGCACTCCAGACCGGGA +
Preference number: 6 (lower is better)
Translates to: GEPLEPGEWRLH*AEITPLHSRPG
Trigger: TCCCGGTCTGGAGTGCAGTGGCGTGATCTCGGCTCAATGTAACCTCCACTCTCCGGGTTCAAGGGGTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000571750.5
ENST00000572337.5
ENST00000572840.1
ENST00000575113.1
ENST00000575397.5
CDS CAA 72 bp TCCCAAGACCTCCACTTCTGTCAGGTCAACAGACAGTaGCGGAGCAGGCTGGAGCAGGGGTGGTGTCGCTTG +
Preference number: 6 (lower is better)
Translates to: SQDLHFCQVNRQ*RSRLEQGWCRL
Trigger: CAAGCGACACCACCCCTGCTCCAGCCTGCTCCGCAACTGTCTGTTGACCTGACAGAAGTGGAGGTCTTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000572990.5
ENST00000575113.1
ENST00000575397.5
ENST00000576652.1
CDS CAA 90 bp CCGGGAGAGAGAGTAAGACTCCGTGCTCTGGTGTTCCAGACCAGCTaGGGCAACACAGTGAAATTCCCATCTCTGAAACCAGCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: PGERVRLRALVFQTS*GNTVKFPSLKPAGR
Trigger: GCGGCCTGCTGGTTTCAGAGATGGGAATTTCACTGTGTTGCCCAAGCTGGTCTGGAACACCAGAGCACGGAGTCTTACTCTCTCTCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576652.1
CDS TCA 72 bp CGGTTCACCTCAAATGGGCAGATGTCCAACACAGGCTaGTCGGTCTGTAGGTCCTGGAGCAACGAGCCACTG +
Preference number: 6 (lower is better)
Translates to: RFTSNGQMSNTG*SVCRSWSNEPL
Trigger: CAGTGGCTCGTTGCTCCAGGACCTACAGACCGATCAGCCTGTGTTGGACATCTGCCCATTTGAGGTGAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS GCA 72 bp TTAAGCCACGTGGAAATGCACCTATACCCAAAGAGATaGCCACAGCGTAATGCTGAGAGCCGGTGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: LSHVEMHLYPKR*PQRNAESRWSP
Trigger: TGGGGACCACCGGCTCTCAGCATTACGCTGTGGGCATCTCTTTGGGTATAGGTGCATTTCCACGTGGCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000572610.1
ENST00000575281.1
CDS CCA 72 bp CCAAAGAGATGCCCACAGCGTAATGCTGAGAGCCGGTaGTCCCCAGCATTGGTCCACTGTTCCAGACATATT +
Preference number: 6 (lower is better)
Translates to: PKRCPQRNAESR*SPALVHCSRHI
Trigger: AATATGTCTGGAACAGTGGACCAATGCTGGGGACCACCGGCTCTCAGCATTACGCTGTGGGCATCTCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000575281.1
CDS CCA 72 bp GGAGCTGTTCTCTGTCTGAAAGTCTATGCAGCCCCCTaGCTCCAAGGGCAGCACATGAGGCCAATGAGAAAA +
Preference number: 6 (lower is better)
Translates to: GAVLCLKVYAAP*LQGQHMRPMRK
Trigger: TTTTCTCATTGGCCTCATGTGCTGCCCTTGGAGCCAGGGGGCTGCATAGACTTTCAGACAGAGAACAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS CCA 72 bp AGGCTGGGTCCTGCTCACCTGAAAGTAAGCATCCAATaGTGCTCTCAACCTGTGGTCCTAGCTACTTGGGAG +
Preference number: 6 (lower is better)
Translates to: RLGPAHLKVSIQ*CSQPVVLATWE
Trigger: CTCCCAAGTAGCTAGGACCACAGGTTGAGAGCACCATTGGATGCTTACTTTCAGGTGAGCAGGACCCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572337.5
CDS CAA 72 bp CCACAGCGTAATGCTGAGAGCCGGTGGTCCCCAGCATaGGTCCACTGTTCCAGACATATTGTACAAGTGTCC +
Preference number: 6 (lower is better)
Translates to: PQRNAESRWSPA*VHCSRHIVQVS
Trigger: GGACACTTGTACAATATGTCTGGAACAGTGGACCAATGCTGGGGACCACCGGCTCTCAGCATTACGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000575281.1
CDS CAA 72 bp CCGGCAGTTTCCTGCCTGAGATACTGTGAAGGTCTTTaGGAAGTGGTACTTGTGCTTGTGCTGGCCCTGGCT +
Preference number: 6 (lower is better)
Translates to: PAVSCLRYCEGL*EVVLVLVLALA
Trigger: AGCCAGGGCCAGCACAAGCACAAGTACCACTTCCAAAAGACCTTCACAGTATCTCAGGCAGGAAACTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS CAA 90 bp GAGACCCTCCGGCTCTTGCCCTCCGTGAAGCAGATACCCTCCTTCTaGTTCTCATTGGCCCTACACTGTGGTTTGAAGATGAAGGTCTCA +
Preference number: 6 (lower is better)
Translates to: ETLRLLPSVKQIPSF*FSLALHCGLKMKVS
Trigger: TGAGACCTTCATCTTCAAACCACAGTGTAGGGCCAATGAGAACAAGAAGGAGGGTATCTGCTTCACGGAGGGCAAGAGCCGGAGGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000575397.5
CDS CAA 90 bp AAGAGATGCCCACAGCGTAATGCTGAGAGCCGGTGGTCCCCAGCATaGGTCCACTGTTCCAGACATATTGTACAAGTGTCCCCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: KRCPQRNAESRWSPA*VHCSRHIVQVSPSS
Trigger: GGAAGAAGGGGACACTTGTACAATATGTCTGGAACAGTGGACCAATGCTGGGGACCACCGGCTCTCAGCATTACGCTGTGGGCATCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000575281.1
CDS CAA 72 bp CGGCTCTTGCCCTCCGTGAAGCAGATACCCTCCTTCTaGTTCTCATTGGCCCTACACTGTGGTTTGAAGATG +
Preference number: 6 (lower is better)
Translates to: RLLPSVKQIPSF*FSLALHCGLKM
Trigger: CATCTTCAAACCACAGTGTAGGGCCAATGAGAACAAGAAGGAGGGTATCTGCTTCACGGAGGGCAAGAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000575397.5
CDS TCA 72 bp GCATCACAGTATGCCATGATCCGGCAGTTTCCTGCCTaGGATACTGTGAAGGTCTTTTGGAAGTGGTACTTG +
Preference number: 6 (lower is better)
Translates to: ASQYAMIRQFPA*DTVKVFWKWYL
Trigger: CAAGTACCACTTCCAAAAGACCTTCACAGTATCTCAGGCAGGAAACTGCCGGATCATGGCATACTGTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS GCA 72 bp AGATTCCTCTGCCTGGTCAACAACCCCTCCATACTCTaGAGAGCTGTCACTGTCAGAATCAGAACTACTAGA +
Preference number: 6 (lower is better)
Translates to: RFLCLVNNPSIL*RAVTVRIRTTR
Trigger: TCTAGTAGTTCTGATTCTGACAGTGACAGCTCTGCAGAGTATGGAGGGGTTGTTGACCAGGCAGAGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000572337.5
CDS GCA 72 bp CAGAGCATCACAGTATGCCATGATCCGGCAGTTTCCTaGCTGAGATACTGTGAAGGTCTTTTGGAAGTGGTA +
Preference number: 6 (lower is better)
Translates to: QSITVCHDPAVS*LRYCEGLLEVV
Trigger: TACCACTTCCAAAAGACCTTCACAGTATCTCAGGCAGGAAACTGCCGGATCATGGCATACTGTGATGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS GCA 72 bp ACCTATGAGGAACTGGGGGTCAGAAGTTACCTGACTTaGCAAAAGTCACACTGTCAGTCCTTGAATGGCAGA +
Preference number: 6 (lower is better)
Translates to: TYEELGVRSYLT*QKSHCQSLNGR
Trigger: TCTGCCATTCAAGGACTGACAGTGTGACTTTTGGCAAGTCAGGTAACTTCTGACCCCCAGTTCCTCATAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571776.1
ENST00000575397.5
CDS CAA 72 bp CGGCATGATTTAACTGCACCTGAACATCATATTCCATaGCTTCATGAGCCATCACTGAAACCAGCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: RHDLTAPEHHIP*LHEPSLKPAGR
Trigger: GCGGCCTGCTGGTTTCAGTGATGGCTCATGAAGCAATGGAATATGATGTTCAGGTGCAGTTAAATCATGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571776.1
CDS CAA 72 bp ACGGTATTTGTCTCCAGGCTGGTCAGTTTAATAGTGTaGTCTAGGGAAGCAGAGAGTAGCAAGCCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: TVFVSRLVSLIV*SREAESSKPLR
Trigger: CCTCAGAGGCTTGCTACTCTCTGCTTCCCTAGACAACACTATTAAACTGACCAGCCTGGAGACAAATACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000575154.1
CDS CAA 90 bp GCTGTTGTTCGGCATGATTTAACTGCACCTGAACATCATATTCCATaGCTTCATGAGCCATCAATTGAGCCGAGATCACGCCACTGCACT +
Preference number: 6 (lower is better)
Translates to: AVVRHDLTAPEHHIP*LHEPSIEPRSRHCT
Trigger: AGTGCAGTGGCGTGATCTCGGCTCAATTGATGGCTCATGAAGCAATGGAATATGATGTTCAGGTGCAGTTAAATCATGCCGAACAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572990.5
ENST00000576652.1
CDS TCA 72 bp CAGATCCCTGCCTATGTTGTTCTGAAGTTCTTGGATTaGTGTTCTCCACAGTGTCTTCTCCCAAGACCTCCA +
Preference number: 6 (lower is better)
Translates to: QIPAYVVLKFLD*CSPQCLLPRPP
Trigger: TGGAGGTCTTGGGAGAAGACACTGTGGAGAACATCAATCCAAGAACTTCAGAACAACATAGGCAGGGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000572990.5
ENST00000575113.1
ENST00000575397.5
ENST00000576652.1
CDS TCA 72 bp ATGAAGTCTCTGCAGTCCGCTGATGAAGTTGGTCATTaGATGCAACGAAGATGCTGGGATGGTGTGATTACC +
Preference number: 6 (lower is better)
Translates to: MKSLQSADEVGH*MQRRCWDGVIT
Trigger: GGTAATCACACCATCCCAGCATCTTCGTTGCATTCAATGACCAACTTCATCAGCGGACTGCAGAGACTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000572990.5
ENST00000575397.5
CDS GCA 72 bp CATGTAACTTCTTGCTCTGCTGAGACACCTGCTAGTTaGTCTGCCAAGTCATTTCCAGAAATGACAGGAGAG +
Preference number: 6 (lower is better)
Translates to: HVTSCSAETPAS*SAKSFPEMTGE
Trigger: CTCTCCTGTCATTTCTGGAAATGACTTGGCAGAGCAACTAGCAGGTGTCTCAGCAGAGCAAGAAGTTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575281.1
CDS CCA 72 bp GATACCCTCCTTCTTGTTCTCATTGGCCCTACACTGTaGTTTGAAGATGAAGGTCTCAGGAATTCCAGCATG +
Preference number: 6 (lower is better)
Translates to: DTLLLVLIGPTL*FEDEGLRNSSM
Trigger: CATGCTGGAATTCCTGAGACCTTCATCTTCAAACCACAGTGTAGGGCCAATGAGAACAAGAAGGAGGGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000575397.5
CDS CCA 72 bp GTCGGTAGGACATTTCCATCAGCACACTTCGTATGGTaGTGTGATTTTTATCAGGCCTGTAGGTCACAAGAC +
Preference number: 6 (lower is better)
Translates to: VGRTFPSAHFVW*CDFYQACRSQD
Trigger: GTCTTGTGACCTACAGGCCTGATAAAAATCACACCACCATACGAAGTGTGCTGATGGAAATGTCCTACCGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS CCA 72 bp CCAGTCGGTAGGACATTTCCATCAGCACACTTCGTATaGTGGTGTGATTTTTATCAGGCCTGTAGGTCACAA +
Preference number: 6 (lower is better)
Translates to: PVGRTFPSAHFV*WCDFYQACRSQ
Trigger: TTGTGACCTACAGGCCTGATAAAAATCACACCACCATACGAAGTGTGCTGATGGAAATGTCCTACCGACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361070.9
ENST00000571750.5
CDS TCA 72 bp AGTCCACGGATCTGTTTGCCATGCATCGGAATGTACTaGCTGCTCTTCATGTTGGCAGTACTCAACATCTTA +
Preference number: 6 (lower is better)
Translates to: SPRICLPCIGMY*LLFMLAVLNIL
Trigger: TAAGATGTTGAGTACTGCCAACATGAAGAGCAGTCAGTACATTCCGATGCATGGCAAACAGATCCGTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000575154.1
CDS TCA 72 bp ATGACTGCTCGTGTTTCGCACGTCATATACCAGAATTaGACCATTGGCCAGTCCAGCATAGATGTAGTTAGC +
Preference number: 6 (lower is better)
Translates to: MTARVSHVIYQN*TIGQSSIDVVS
Trigger: GCTAACTACATCTATGCTGGACTGGCCAATGGTTCAATTCTGGTATATGACGTGCGAAACACGAGCAGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000575154.1
CDS GCA 72 bp ATCTGGCTTTCTGAGCTACTAACTCCTGCACATGACTaGTCGTGTTTCGCACGTCATATACCAGAATTGAAC +
Preference number: 6 (lower is better)
Translates to: IWLSELLTPAHD*SCFARHIPELN
Trigger: GTTCAATTCTGGTATATGACGTGCGAAACACGAGCAGTCATGTGCAGGAGTTAGTAGCTCAGAAAGCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000575154.1
CDS CAA 72 bp CTGCACTCCAGACCGGGAGAGAGAGTAAGACTCCGTTaGTTCTCCTGTAAAACAGGGATAATACAAGTCTTT +
Preference number: 6 (lower is better)
Translates to: LHSRPGERVRLR*FSCKTGIIQVF
Trigger: AAAGACTTGTATTATCCCTGTTTTACAGGAGAACAAACGGAGTCTTACTCTCTCTCCCGGTCTGGAGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575113.1
CDS TCA 72 bp GGTGTGATTACCATCAGATCCCTGCCTATGTTGTTCTaGAGTTCTTGGATTGATGTTCTCCACAGTGTCTTC +
Preference number: 6 (lower is better)
Translates to: GVITIRSLPMLF*SSWIDVLHSVF
Trigger: GAAGACACTGTGGAGAACATCAATCCAAGAACTTCAGAACAACATAGGCAGGGATCTGATGGTAATCACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000572990.5
ENST00000575113.1
ENST00000575397.5
ENST00000576652.1
CDS TCA 72 bp TTGGTCATTGAATGCAACGAAGATGCTGGGATGGTGTaGTTACCATCAGATCCCTGCCTATGTTGTTCTGAA +
Preference number: 6 (lower is better)
Translates to: LVIECNEDAGMV*LPSDPCLCCSE
Trigger: TTCAGAACAACATAGGCAGGGATCTGATGGTAATCACACCATCCCAGCATCTTCGTTGCATTCAATGACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361070.9
ENST00000571750.5
ENST00000571776.1
ENST00000572990.5
ENST00000575397.5
ENST00000576652.1
CDS CCA 72 bp CCTGACTTGCCAAAAGTCACACTGTCAGTCCTTGAATaGCAGAGCCTCAGTTTCATAATTTCTAGTACAGCA +
Preference number: 6 (lower is better)
Translates to: PDLPKVTLSVLE*QSLSFIISSTA
Trigger: TGCTGTACTAGAAATTATGAAACTGAGGCTCTGCCATTCAAGGACTGACAGTGTGACTTTTGGCAAGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571776.1
ENST00000575397.5
CDS CAA 72 bp AGACACAATCTGAACAACAGCCAATCTCTACAGAGATaGCCAACAAACTACCACCTAGTTTTCAAGGCACAA +
Preference number: 6 (lower is better)
Translates to: RHNLNNSQSLQR*PTNYHLVFKAQ
Trigger: TTGTGCCTTGAAAACTAGGTGGTAGTTTGTTGGCAATCTCTGTAGAGATTGGCTGTTGTTCAGATTGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571776.1
CDS CAA 90 bp TGGTGTACAAGACACAATCTGAACAACAGCCAATCTCTACAGAGATaGCCAACAAACTACCACCTAGTTTTCAAGGCACAACAGTTTAAC +
Preference number: 6 (lower is better)
Translates to: WCTRHNLNNSQSLQR*PTNYHLVFKAQQFN
Trigger: GTTAAACTGTTGTGCCTTGAAAACTAGGTGGTAGTTTGTTGGCAATCTCTGTAGAGATTGGCTGTTGTTCAGATTGTGTCTTGTACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571776.1