RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RFT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163933

Ensembl transcript IDs: ENST00000296292.8, ENST00000394738.7, ENST00000471158.1

Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGCAGGCTGCAAGGTGCAGAACACCTGGGCTCACACTGTAGCCTaGAGTACCAGGCCCCCATGCCTGCCACTCTTGTCCTGGGGCTGG +
Preference number: 1 (lower is better)
Translates to: CAGCKVQNTWAHTVA*STRPPCLPLLSWGW
Trigger: CCAGCCCCAGGACAAGAGTGGCAGGCATGGGGGCCTGGTACTCCAGGCTACAGTGTGAGCCCAGGTGTTCTGCACCTTGCAGCCTGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 90 bp AGGGGGTCCAGCAGGGGAAATGCCAGAGGCCTGGTCAGGTCCAGCTaGGCTTTAGGGAGGCACCAGAGGCAGAGAACCACAGAGGACCTG +
Preference number: 1 (lower is better)
Translates to: RGSSRGNARGLVRSS*ALGRHQRQRTTEDL
Trigger: CAGGTCCTCTGTGGTTCTCTGCCTCTGGTGCCTCCCTAAAGCTCAGCTGGACCTGACCAGGCCTCTGGCATTTCCCCTGCTGGACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 90 bp AGCCACGTGGGCTTGCCAGAAAAGCCAATCTCAGAGCCCTCCTCCTaGGAGACACAGACCCTGAAGGCCTGGAGTGGGTCCTGGGAAGCC +
Preference number: 1 (lower is better)
Translates to: SHVGLPEKPISEPSS*ETQTLKAWSGSWEA
Trigger: GGCTTCCCAGGACCCACTCCAGGCCTTCAGGGTCTGTGTCTCCCAGGAGGAGGGCTCTGAGATTGGCTTTTCTGGCAAGCCCACGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 90 bp GGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTaGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTA +
Preference number: 1 (lower is better)
Translates to: GHRCLMQWHSLVPHL*GCCHSAAEPSVGLL
Trigger: TAAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
3UTR GCA 90 bp GTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTaGAGAGCCCTCAGTGGGGCTCTTACACAGAATGTGTTCCACCCA +
Preference number: 1 (lower is better)
Translates to: VALSGASSLGLLSLR*RALSGALTQNVFHP
Trigger: TGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
3UTR GCA 90 bp AGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTaGTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTACACAGA +
Preference number: 1 (lower is better)
Translates to: RCLMQWHSLVPHLWG*CHSAAEPSVGLLHR
Trigger: TCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
3UTR GCA 90 bp CATAGAGCCTCTCTCAAGCTGAGAGAGCACAAGCCTGGGGAGTCCTaGTCCCAGAGACCCCGGAGTCACAAGGCTGCTTGTAGAGCAGCA +
Preference number: 1 (lower is better)
Translates to: HRASLKLREHKPGES*SQRPRSHKAACRAA
Trigger: TGCTGCTCTACAAGCAGCCTTGTGACTCCGGGGTCTCTGGGAGCAGGACTCCCCAGGCTTGTGCTCTCTCAGCTTGAGAGAGGCTCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 90 bp ACAACTCTCCCTAGATACAGGGAAGCAGGACACCGGAAGAAGCCCTaGGCTGCCTTTGCGGCTGGCTGTCTTTCAAGAGGAGCTGGCCCT +
Preference number: 1 (lower is better)
Translates to: TTLPRYREAGHRKKP*AAFAAGCLSRGAGP
Trigger: AGGGCCAGCTCCTCTTGAAAGACAGCCAGCCGCAAAGGCAGCCCAGGGCTTCTTCCGGTGTCCTGCTTCCCTGTATCTAGGGAGAGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 90 bp AGGAGTCTCCAGCCAGCTTTCACCCACCCTTCAATCAACAAATCCTaGGAGCCCACTCTGGGTCAAGTATGTGCTGACCTGGGGCGGCGG +
Preference number: 1 (lower is better)
Translates to: RSLQPAFTHPSINKS*EPTLGQVCADLGRR
Trigger: CCGCCGCCCCAGGTCAGCACATACTTGACCCAGAGTGGGCTCTCAGGATTTGTTGATTGAAGGGTGGGTGAAAGCTGGCTGGAGACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 90 bp AAAGACAGGAGGAAGGAGGGGCCCTGCTTGAATCAGGTTGGGAAGTaGCTGGGAACAGGGCAGAGTAGCGGTTCCAGAGCCAGAAGTTGC +
Preference number: 1 (lower is better)
Translates to: KDRRKEGPCLNQVGK*LGTGQSSGSRARSC
Trigger: GCAACTTCTGGCTCTGGAACCGCTACTCTGCCCTGTTCCCAGCCACTTCCCAACCTGATTCAAGCAGGGCCCCTCCTTCCTCCTGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 90 bp TCCGGGAGGGTGATCAGCAGCTGCAGAGAAGCAGCTCATGAGGACTaGAGGTCCCTTTCTGTGGATGCCAGGGACAGAGAAAGGACATGG +
Preference number: 1 (lower is better)
Translates to: SGRVISSCREAAHED*RSLSVDARDRERTW
Trigger: CCATGTCCTTTCTCTGTCCCTGGCATCCACAGAAAGGGACCTTCAGTCCTCATGAGCTGCTTCTCTGCAGCTGCTGATCACCCTCCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 90 bp CAAAGTGGCTCAACTGGATCACAGTTTTCTTCAAAGTCCGCCTCTTaGAGGTGGCCAGGCCAGGAGTCTCCAGCCAGCTTTCACCCACCC +
Preference number: 1 (lower is better)
Translates to: QSGSTGSQFSSKSAS*RWPGQESPASFHPP
Trigger: GGGTGGGTGAAAGCTGGCTGGAGACTCCTGGCCTGGCCACCTGCAAGAGGCGGACTTTGAAGAAAACTGTGATCCAGTTGAGCCACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 90 bp CAGAACACCTGGGCTCACACTGTAGCCTGGAGTACCAGGCCCCCATaGCTGCCACTCTTGTCCTGGGGCTGGAATTTGGTTGTATTGATC +
Preference number: 1 (lower is better)
Translates to: QNTWAHTVAWSTRPP*LPLLSWGWNLVVLI
Trigger: GATCAATACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAGGCATGGGGGCCTGGTACTCCAGGCTACAGTGTGAGCCCAGGTGTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 90 bp ACAATGGGGCATGCCAACCTTGGTGGCATCAAAGCCACGTGGGCTTaGCAGAAAAGCCAATCTCAGAGCCCTCCTCCTGGGAGACACAGA +
Preference number: 1 (lower is better)
Translates to: TMGHANLGGIKATWA*QKSQSQSPPPGRHR
Trigger: TCTGTGTCTCCCAGGAGGAGGGCTCTGAGATTGGCTTTTCTGGCAAGCCCACGTGGCTTTGATGCCACCAAGGTTGGCATGCCCCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 90 bp GAGCATGATGGTCCTGGGCCTGTCACGAAGGAAGACAATGGGGCATaGCAACCTTGGTGGCATCAAAGCCACGTGGGCTTGCCAGAAAAG +
Preference number: 1 (lower is better)
Translates to: EHDGPGPVTKEDNGA*QPWWHQSHVGLPEK
Trigger: CTTTTCTGGCAAGCCCACGTGGCTTTGATGCCACCAAGGTTGGCATGCCCCATTGTCTTCCTTCGTGACAGGCCCAGGACCATCATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 90 bp TCAACAAATCCTGAGAGCCCACTCTGGGTCAAGTATGTGCTGACCTaGGGCGGCGGGGAACAGTGTGATCACGACAGGCAAGATTCTCCC +
Preference number: 1 (lower is better)
Translates to: STNPESPLWVKYVLT*GGGEQCDHDRQDSP
Trigger: GGGAGAATCTTGCCTGTCGTGATCACACTGTTCCCCGCCGCCCCAGGTCAGCACATACTTGACCCAGAGTGGGCTCTCAGGATTTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 90 bp AGGAAGACAATGGGGCATGCCAACCTTGGTGGCATCAAAGCCACGTaGGCTTGCCAGAAAAGCCAATCTCAGAGCCCTCCTCCTGGGAGA +
Preference number: 1 (lower is better)
Translates to: RKTMGHANLGGIKAT*ACQKSQSQSPPPGR
Trigger: TCTCCCAGGAGGAGGGCTCTGAGATTGGCTTTTCTGGCAAGCCCACGTGGCTTTGATGCCACCAAGGTTGGCATGCCCCATTGTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 90 bp CCTGGGCCTGTCACGAAGGAAGACAATGGGGCATGCCAACCTTGGTaGCATCAAAGCCACGTGGGCTTGCCAGAAAAGCCAATCTCAGAG +
Preference number: 1 (lower is better)
Translates to: PGPVTKEDNGACQPW*HQSHVGLPEKPISE
Trigger: CTCTGAGATTGGCTTTTCTGGCAAGCCCACGTGGCTTTGATGCCACCAAGGTTGGCATGCCCCATTGTCTTCCTTCGTGACAGGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 90 bp GGTCCTGGGCCTGTCACGAAGGAAGACAATGGGGCATGCCAACCTTaGTGGCATCAAAGCCACGTGGGCTTGCCAGAAAAGCCAATCTCA +
Preference number: 1 (lower is better)
Translates to: GPGPVTKEDNGACQP*WHQSHVGLPEKPIS
Trigger: TGAGATTGGCTTTTCTGGCAAGCCCACGTGGCTTTGATGCCACCAAGGTTGGCATGCCCCATTGTCTTCCTTCGTGACAGGCCCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 90 bp ACTCTGGGTCAAGTATGTGCTGACCTGGGGCGGCGGGGAACAGTGTaGTCACGACAGGCAAGATTCTCCCGAACTCACTCTGGGAAATGT +
Preference number: 1 (lower is better)
Translates to: TLGQVCADLGRRGTV*SRQARFSRTHSGKC
Trigger: ACATTTCCCAGAGTGAGTTCGGGAGAATCTTGCCTGTCGTGATCACACTGTTCCCCGCCGCCCCAGGTCAGCACATACTTGACCCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 90 bp CTTCCGTGTGTGCTCCACTTGACCCTATGGGACCATCCATTTTTCTaGGCTGGCCTGACCTTGCCCGATGAAGGCATGACTGAGGCCATG +
Preference number: 1 (lower is better)
Translates to: LPCVLHLTLWDHPFF*AGLTLPDEGMTEAM
Trigger: CATGGCCTCAGTCATGCCTTCATCGGGCAAGGTCAGGCCAGCTCAGAAAAATGGATGGTCCCATAGGGTCAAGTGGAGCACACACGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 90 bp CACAGCAGCAGCTCCTCACTGAGAGACCCCAAGCCAAATCTGAAGTaGCCAACAGTTACCTGTGGCCAGAGGAGCACAGGAAGTCAGCGA +
Preference number: 1 (lower is better)
Translates to: HSSSSSLRDPKPNLK*PTVTCGQRSTGSQR
Trigger: TCGCTGACTTCCTGTGCTCCTCTGGCCACAGGTAACTGTTGGTCACTTCAGATTTGGCTTGGGGTCTCTCAGTGAGGAGCTGCTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 90 bp GACCCTGAAGGCCTGGAGTGGGTCCTGGGAAGCCATGTTCTGACTTaGAATCCAGGTGATTCCGAGGCAGGTAGAATGAGGATCATGCTT +
Preference number: 1 (lower is better)
Translates to: DPEGLEWVLGSHVLT*NPGDSEAGRMRIML
Trigger: AAGCATGATCCTCATTCTACCTGCCTCGGAATCACCTGGATTGCAAGTCAGAACATGGCTTCCCAGGACCCACTCCAGGCCTTCAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 90 bp AAGTGGCTGGGAACAGGGCAGAGTAGCGGTTCCAGAGCCAGAAGTTaGCATCAGGTAAGCATTAAACAGCACAGCAGCAGCTCCTCACTG +
Preference number: 1 (lower is better)
Translates to: KWLGTGQSSGSRARS*HQVSIKQHSSSSSL
Trigger: CAGTGAGGAGCTGCTGCTGTGCTGTTTAATGCTTACCTGATGGCAACTTCTGGCTCTGGAACCGCTACTCTGCCCTGTTCCCAGCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 90 bp TTCAATCAACAAATCCTGAGAGCCCACTCTGGGTCAAGTATGTGCTaGCCTGGGGCGGCGGGGAACAGTGTGATCACGACAGGCAAGATT +
Preference number: 1 (lower is better)
Translates to: FNQQILRAHSGSSMC*PGAAGNSVITTGKI
Trigger: AATCTTGCCTGTCGTGATCACACTGTTCCCCGCCGCCCCAGGTCAGCACATACTTGACCCAGAGTGGGCTCTCAGGATTTGTTGATTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 90 bp GAAAGCTGCAAAGCAGCATTCCCCTCAGGGACAAAGTGGCTCAACTaGATCACAGTTTTCTTCAAAGTCCGCCTCTTGCAGGTGGCCAGG +
Preference number: 1 (lower is better)
Translates to: ESCKAAFPSGTKWLN*ITVFFKVRLLQVAR
Trigger: CCTGGCCACCTGCAAGAGGCGGACTTTGAAGAAAACTGTGATCCAGTTGAGCCACTTTGTCCCTGAGGGGAATGCTGCTTTGCAGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 90 bp GCCTGGAGTACCAGGCCCCCATGCCTGCCACTCTTGTCCTGGGGCTaGAATTTGGTTGTATTGATCAATGCTGGAATTAATGGGTCAACG +
Preference number: 1 (lower is better)
Translates to: AWSTRPPCLPLLSWG*NLVVLINAGINGST
Trigger: CGTTGACCCATTAATTCCAGCATTGATCAATACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAGGCATGGGGGCCTGGTACTCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 90 bp GCTGGCCTGACCTTGCCCGATGAAGGCATGACTGAGGCCATGCTTTaGAGGTCCTCTAATTGCTCAGGACACCTTGCATTTAGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: AGLTLPDEGMTEAML*RSSNCSGHLAFSCF
Trigger: AAAGCAGCTAAATGCAAGGTGTCCTGAGCAATTAGAGGACCTCCAAAGCATGGCCTCAGTCATGCCTTCATCGGGCAAGGTCAGGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 90 bp CCCCATGCCTGCCACTCTTGTCCTGGGGCTGGAATTTGGTTGTATTaGTCAATGCTGGAATTAATGGGTCAACGGGAGGGACCTGACTCA +
Preference number: 1 (lower is better)
Translates to: PHACHSCPGAGIWLY*SMLELMGQREGPDS
Trigger: TGAGTCAGGTCCCTCCCGTTGACCCATTAATTCCAGCATTGATCAATACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAGGCATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 90 bp ACTGAGAGACCCCAAGCCAAATCTGAAGTGACCAACAGTTACCTGTaGCCAGAGGAGCACAGGAAGTCAGCGATACTGTTCTTCTCACCA +
Preference number: 1 (lower is better)
Translates to: TERPQAKSEVTNSYL*PEEHRKSAILFFSP
Trigger: TGGTGAGAAGAACAGTATCGCTGACTTCCTGTGCTCCTCTGGCCACAGGTAACTGTTGGTCACTTCAGATTTGGCTTGGGGTCTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 90 bp GAAGTTACAGAAAGCTGCAAAGCAGCATTCCCCTCAGGGACAAAGTaGCTCAACTGGATCACAGTTTTCTTCAAAGTCCGCCTCTTGCAG +
Preference number: 1 (lower is better)
Translates to: EVTESCKAAFPSGTK*LNWITVFFKVRLLQ
Trigger: CTGCAAGAGGCGGACTTTGAAGAAAACTGTGATCCAGTTGAGCCACTTTGTCCCTGAGGGGAATGCTGCTTTGCAGCTTTCTGTAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 90 bp AGAAAGCCACAACTTCAGGGCCACACTCTGTTTCCATGTGGTGCATaGGAGAGAGAGGTTTCTCTCTCTCTTTTACAGAAGAAGTTCAAT +
Preference number: 1 (lower is better)
Translates to: RKPQLQGHTLFPCGA*EREVSLSLLQKKFN
Trigger: ATTGAACTTCTTCTGTAAAAGAGAGAGAGAAACCTCTCTCTCTCATGCACCACATGGAAACAGAGTGTGGCCCTGAAGTTGTGGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 90 bp GTTGTATTGATCAATGCTGGAATTAATGGGTCAACGGGAGGGACCTaGCTCAGTAATACTAGCCATATAGAGTTTGCCTTGTCTTATTCT +
Preference number: 1 (lower is better)
Translates to: VVLINAGINGSTGGT*LSNTSHIEFALSYS
Trigger: AGAATAAGACAAGGCAAACTCTATATGGCTAGTATTACTGAGTCAGGTCCCTCCCGTTGACCCATTAATTCCAGCATTGATCAATACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR GCA 90 bp CTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTCATAGCTGGTCCAGGTaGCTCGGGTGTCCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: LSGASSLGLLSLRCRALSHSWSR*LGCPGF
Trigger: GAAGCCTGGACACCCGAGGCACCTGGACCAGCTATG...ACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
3UTR-3UTR CCA 90 bp CCTGCTGCCAAAGTGCTGACAGCCCAGGCGGCAGGGCTAGTCCTGGGAAAACACCTGGTGCCTCATCTCTaGGGTTGCTGTCACTCCGCT +
Preference number: 2 (lower is better)
Translates to: PAAKVLTAQAAGLVLGKHLVPHL*GCCHSA
Trigger: AGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAG...GTGTTTTCCCAGGACTAGCCCTGCCGCCTGGGCTGTCAGCACTTTGGCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR TCA 90 bp CCTGCTGCCAAAGTGCTGACAGCCCAGGCGGCAGGGCTAGTCCTGGGAAAACACGACCATCCATTTTTCTaGGCTGGCCTGACCTTGCCC +
Preference number: 2 (lower is better)
Translates to: PAAKVLTAQAAGLVLGKHDHPFF*AGLTLP
Trigger: GGGCAAGGTCAGGCCAGCTCAGAAAAATGGATGGTC...GTGTTTTCCCAGGACTAGCCCTGCCGCCTGGGCTGTCAGCACTTTGGCAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR CCA 90 bp TCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGAGAACTACCCATAGCTaGTCCAGGTGCCTCGGGTGT +
Preference number: 2 (lower is better)
Translates to: SGASSLGLLSLRCRALSGRTTHS*SRCLGC
Trigger: ACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCT...CCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
3UTR CAA 90 bp GACAATGGGGCATGCCAACCTTGGTGGCATCAAAGCCACGTGGGCTaGCCAGAAAAGCCAATCTCAGAGCCCTCCTCCTGGGAGACACAG +
Preference number: 2 (lower is better)
Translates to: DNGACQPWWHQSHVG*PEKPISEPSSWETQ
Trigger: CTGTGTCTCCCAGGAGGAGGGCTCTGAGATTGGCTTTTCTGGCAAGCCCACGTGGCTTTGATGCCACCAAGGTTGGCATGCCCCATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR CCA 90 bp CCTGCTGCCAAAGTGCTGACAGCCCAGGCGGCAGGGCTAGTCCTGGGAAAACACCTGCCACTCTTGTCCTaGGGCTGGAATTTGGTTGTA +
Preference number: 2 (lower is better)
Translates to: PAAKVLTAQAAGLVLGKHLPLLS*GWNLVV
Trigger: TACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAG...GTGTTTTCCCAGGACTAGCCCTGCCGCCTGGGCTGTCAGCACTTTGGCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CAA 90 bp TGGTCCTGGGCCTGTCACGAAGGAAGACAATGGGGCATGCCAACCTaGGTGGCATCAAAGCCACGTGGGCTTGCCAGAAAAGCCAATCTC +
Preference number: 2 (lower is better)
Translates to: WSWACHEGRQWGMPT*VASKPRGLARKANL
Trigger: GAGATTGGCTTTTCTGGCAAGCCCACGTGGCTTTGATGCCACCAAGGTTGGCATGCCCCATTGTCTTCCTTCGTGACAGGCCCAGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR GCA 90 bp CCCCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTCATAGCTGGTCCAGGTaGCTCGGGTGTCCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: PRISDFEWSQVSHAVALSHSWSR*LGCPGF
Trigger: GAAGCCTGGACACCCGAGGCACCTGGACCAGCTATG...AGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
3UTR-3UTR GCA 90 bp TTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGTTGCTGTCACTCCGCTaGAGAGCCCTCAGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: FEWSQVSHAVALSGASSLLLSLR*RALSGA
Trigger: AGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAA...CAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
3UTR-3UTR CCA 90 bp TGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGCAGAGCCCTCAGTaGGGCTCTTACACAGAATGT +
Preference number: 2 (lower is better)
Translates to: WSQVSHAVALSGASSLGLLQSPQ*GSYTEC
Trigger: ACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAG...CAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
3UTR-3UTR CCA 90 bp TGCTCCCAGAGACCCCGGAGTCACAAGGCTGCTTGTAGAGCAGCAGCTCTGTTCCCCTCAGGGACAAAGTaGCTCAACTGGATCACAGTT +
Preference number: 2 (lower is better)
Translates to: CSQRPRSHKAACRAAALFPSGTK*LNWITV
Trigger: AACTGTGATCCAGTTGAGCCACTTTGTCCCTGAGGG...GAACAGAGCTGCTGCTCTACAAGCAGCCTTGTGACTCCGGGGTCTCTGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR GCA 90 bp ATGAGGACTGAAGGTCCCTTTCTGTGGATGCCAGGGACAGAGAAAGGACATGGGAGTGGCACTCTCTGGTaGCTCATCTCTGGGGTTGCT +
Preference number: 2 (lower is better)
Translates to: MRTEGPFLWMPGTEKGHGSGTLW*LISGVA
Trigger: AGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACT...CCCATGTCCTTTCTCTGTCCCTGGCATCCACAGAAAGGGACCTTCAGTCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR CCA 90 bp CCCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGAGAACTACCCATAGCTaGTCCAGGTGCCTCGGGTGT +
Preference number: 2 (lower is better)
Translates to: PAFQTSNGHRCLMQWHSLRTTHS*SRCLGC
Trigger: ACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCT...CAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
3UTR CAA 90 bp AGTACCAGGCCCCCATGCCTGCCACTCTTGTCCTGGGGCTGGAATTaGGTTGTATTGATCAATGCTGGAATTAATGGGTCAACGGGAGGG +
Preference number: 2 (lower is better)
Translates to: STRPPCLPLLSWGWN*VVLINAGINGSTGG
Trigger: CCCTCCCGTTGACCCATTAATTCCAGCATTGATCAATACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAGGCATGGGGGCCTGGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CAA 90 bp GCTCACACTGTAGCCTGGAGTACCAGGCCCCCATGCCTGCCACTCTaGTCCTGGGGCTGGAATTTGGTTGTATTGATCAATGCTGGAATT +
Preference number: 2 (lower is better)
Translates to: AHTVAWSTRPPCLPL*SWGWNLVVLINAGI
Trigger: AATTCCAGCATTGATCAATACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAGGCATGGGGGCCTGGTACTCCAGGCTACAGTGTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR GCA 90 bp GGAAAACACGCAGCCACATGTACAACTCTCCCTAGATACAGGGAAGCAGGACACGTCACAGGTGTCTCATaGAGTGGCACTCTCTGGTGC +
Preference number: 2 (lower is better)
Translates to: GKHAATCTTLPRYREAGHVTGVS*SGTLWC
Trigger: GCACCAGAGAGTGCCACTGCATGAGACACCTGTGAC...GTGTCCTGCTTCCCTGTATCTAGGGAGAGTTGTACATGTGGCTGCGTGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR CCA 90 bp GGAAAACACGCAGCCACATGTACAACTCTCCCTAGATACAGGGAAGCAGGACACTTAATCCTTAGCCCCTaGGTACTGGCTCTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: GKHAATCTTLPRYREAGHLILSP*VLALGK
Trigger: CTTGCCCAGAGCCAGTACCCAGGGGCTAAGGATTAA...GTGTCCTGCTTCCCTGTATCTAGGGAGAGTTGTACATGTGGCTGCGTGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR GCA 90 bp GGAAAACACGCAGCCACATGTACAACTCTCCCTAGATACAGGGAAGCAGGACACATGCATGATAGGAGTTaGCCTTACTGGCCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: GKHAATCTTLPRYREAGHMHDRS*PYWPSL
Trigger: GAGAGAGGGCCAGTAAGGGCAACTCCTATCATGCAT...GTGTCCTGCTTCCCTGTATCTAGGGAGAGTTGTACATGTGGCTGCGTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR CCA 90 bp GAAGGAGGACTGCCTTCCGTGTGTGCTCCACTTGACCCTATGGGACCATCCATTATTTCAGACTTCGAATaGTCACAGGTGTCTCATGCA +
Preference number: 2 (lower is better)
Translates to: EGGLPSVCAPLDPMGPSIISDFE*SQVSHA
Trigger: TGCATGAGACACCTGTGACCATTCGAAGTCTGAAAT...AATGGATGGTCCCATAGGGTCAAGTGGAGCACACACGGAAGGCAGTCCTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CAA 90 bp GTGGTATTGAAAGCCAAAAGTATGATTTCTGCTCCCCAAATCCACTaGGGTAAAGTGAGGCAGGCTGGCCCACATGTATGCAAGCTCCCT +
Preference number: 2 (lower is better)
Translates to: VVLKAKSMISAPQIH*GKVRQAGPHVCKLP
Trigger: AGGGAGCTTGCATACATGTGGGCCAGCCTGCCTCACTTTACCCAAGTGGATTTGGGGAGCAGAAATCATACTTTTGGCTTTCAATACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR TCA 90 bp ATGAGGACTGAAGGTCCCTTTCTGTGGATGCCAGGGACAGAGAAAGGACATGGGAAAGCATTCTCCCTCTaGGTAGATAAAAACCTGCCA +
Preference number: 2 (lower is better)
Translates to: MRTEGPFLWMPGTEKGHGKAFSL*VDKNLP
Trigger: TGGCAGGTTTTTATCTACTCAGAGGGAGAATGCTTT...CCCATGTCCTTTCTCTGTCCCTGGCATCCACAGAAAGGGACCTTCAGTCCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR CCA 90 bp CTAAAAACTCAGACCACAGTTTTGACACAAAGAAAGCCACAACTTCAGGGCCACAGGTGTCTCATGCAGTaGCACTCTCTGGTGCCTCAT +
Preference number: 2 (lower is better)
Translates to: LKTQTTVLTQRKPQLQGHRCLMQ*HSLVPH
Trigger: ATGAGGCACCAGAGAGTGCCACTGCATGAGACACCT...GTGGCCCTGAAGTTGTGGCTTTCTTTGTGTCAAAACTGTGGTCTGAGTTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR GCA 90 bp CTCAGAGACTTGTTTCCATGGAGAAGTAGCCTCACTATAAGTGGTATTGAAAGCGCTCATGATTTCACCTaGAGTGTGCAGGCTGCAAGG +
Preference number: 2 (lower is better)
Translates to: LRDLFPWRSSLTISGIESAHDFT*SVQAAR
Trigger: CCTTGCAGCCTGCACACTGCAGGTGAAATCATGAGC...GCTTTCAATACCACTTATAGTGAGGCTACTTCTCCATGGAAACAAGTCTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 72 bp AGTGAGGCAGGCTGGCCCACATGTATGCAAGCTCCCTaGGGCACAGCTGTGGCTCTAGGGGGTCCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: SEAGWPTCMQAP*GTAVALGGPAG
Trigger: CCCTGCTGGACCCCCTAGAGCCACAGCTGTGCCTCAGGGAGCTTGCATACATGTGGGCCAGCCTGCCTCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR CAA 90 bp CTGCAAGGTGCAGAACACCTGGGCTCACACTGTAGCCTGGAGTACCAGGCCCCCGCCTCATCTCTGGGGTaGCTGTCACTCCGCTGCAGA +
Preference number: 3 (lower is better)
Translates to: LQGAEHLGSHCSLEYQAPASSLG*LSLRCR
Trigger: TCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGC...GGGGGCCTGGTACTCCAGGCTACAGTGTGAGCCCAGGTGTTCTGCACCTTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 72 bp CTTTGCGGCTGGCTGTCTTTCAAGAGGAGCTGGCCCTaGCAGCAGCACTGGGCGAACAGCAGGGGAGGGATG +
Preference number: 3 (lower is better)
Translates to: LCGWLSFKRSWP*QQHWANSRGGM
Trigger: CATCCCTCCCCTGCTGTTCGCCCAGTGCTGCTGTCAGGGCCAGCTCCTCTTGAAAGACAGCCAGCCGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 72 bp ATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTaGTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTC +
Preference number: 3 (lower is better)
Translates to: MQWHSLVPHLWG*CHSAAEPSVGL
Trigger: GAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
3UTR CCA 72 bp CCTGAGAGCCCACTCTGGGTCAAGTATGTGCTGACCTaGGGCGGCGGGGAACAGTGTGATCACGACAGGCAA +
Preference number: 3 (lower is better)
Translates to: PESPLWVKYVLT*GGGEQCDHDRQ
Trigger: TTGCCTGTCGTGATCACACTGTTCCCCGCCGCCCCAGGTCAGCACATACTTGACCCAGAGTGGGCTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 72 bp AGGAAGGAGGGGCCCTGCTTGAATCAGGTTGGGAAGTaGCTGGGAACAGGGCAGAGTAGCGGTTCCAGAGCC +
Preference number: 3 (lower is better)
Translates to: RKEGPCLNQVGK*LGTGQSSGSRA
Trigger: GGCTCTGGAACCGCTACTCTGCCCTGTTCCCAGCCACTTCCCAACCTGATTCAAGCAGGGCCCCTCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 72 bp TGGGCTCACACTGTAGCCTGGAGTACCAGGCCCCCATaGCTGCCACTCTTGTCCTGGGGCTGGAATTTGGTT +
Preference number: 3 (lower is better)
Translates to: WAHTVAWSTRPP*LPLLSWGWNLV
Trigger: AACCAAATTCCAGCCCCAGGACAAGAGTGGCAGGCATGGGGGCCTGGTACTCCAGGCTACAGTGTGAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 72 bp GGTCCTGGGCCTGTCACGAAGGAAGACAATGGGGCATaGCAACCTTGGTGGCATCAAAGCCACGTGGGCTTG +
Preference number: 3 (lower is better)
Translates to: GPGPVTKEDNGA*QPWWHQSHVGL
Trigger: CAAGCCCACGTGGCTTTGATGCCACCAAGGTTGGCATGCCCCATTGTCTTCCTTCGTGACAGGCCCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 72 bp TCTCTCAAGCTGAGAGAGCACAAGCCTGGGGAGTCCTaGTCCCAGAGACCCCGGAGTCACAAGGCTGCTTGT +
Preference number: 3 (lower is better)
Translates to: SLKLREHKPGES*SQRPRSHKAAC
Trigger: ACAAGCAGCCTTGTGACTCCGGGGTCTCTGGGAGCAGGACTCCCCAGGCTTGTGCTCTCTCAGCTTGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 72 bp TGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTaGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTG +
Preference number: 3 (lower is better)
Translates to: CLMQWHSLVPHL*GCCHSAAEPSV
Trigger: CACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
3UTR TCA 72 bp CAAATCCTGAGAGCCCACTCTGGGTCAAGTATGTGCTaGCCTGGGGCGGCGGGGAACAGTGTGATCACGACA +
Preference number: 3 (lower is better)
Translates to: QILRAHSGSSMC*PGAAGNSVITT
Trigger: TGTCGTGATCACACTGTTCCCCGCCGCCCCAGGTCAGCACATACTTGACCCAGAGTGGGCTCTCAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 72 bp CGGGAGGGTGATCAGCAGCTGCAGAGAAGCAGCTCATaGGGACTGAAGGTCCCTTTCTGTGGATGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: REGDQQLQRSSS*GLKVPFCGCQG
Trigger: TCCCTGGCATCCACAGAAAGGGACCTTCAGTCCTCATGAGCTGCTTCTCTGCAGCTGCTGATCACCCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 72 bp CATGCCAACCTTGGTGGCATCAAAGCCACGTGGGCTTaGCAGAAAAGCCAATCTCAGAGCCCTCCTCCTGGG +
Preference number: 3 (lower is better)
Translates to: HANLGGIKATWA*QKSQSQSPPPG
Trigger: CCCAGGAGGAGGGCTCTGAGATTGGCTTTTCTGGCAAGCCCACGTGGCTTTGATGCCACCAAGGTTGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 72 bp CCTAGATACAGGGAAGCAGGACACCGGAAGAAGCCCTaGGCTGCCTTTGCGGCTGGCTGTCTTTCAAGAGGA +
Preference number: 3 (lower is better)
Translates to: PRYREAGHRKKP*AAFAAGCLSRG
Trigger: TCCTCTTGAAAGACAGCCAGCCGCAAAGGCAGCCCAGGGCTTCTTCCGGTGTCCTGCTTCCCTGTATCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 72 bp AACCTGCCAGGTGACTGGGCCCCAGTCTTGGTGTACTaGCAGGTCTTAATCCTTAGCCCCTGGGTACTGGCT +
Preference number: 3 (lower is better)
Translates to: NLPGDWAPVLVY*QVLILSPWVLA
Trigger: AGCCAGTACCCAGGGGCTAAGGATTAAGACCTGTCAGTACACCAAGACTGGGGCCCAGTCACCTGGCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 72 bp GGCCTGGAGTGGGTCCTGGGAAGCCATGTTCTGACTTaGAATCCAGGTGATTCCGAGGCAGGTAGAATGAGG +
Preference number: 3 (lower is better)
Translates to: GLEWVLGSHVLT*NPGDSEAGRMR
Trigger: CCTCATTCTACCTGCCTCGGAATCACCTGGATTGCAAGTCAGAACATGGCTTCCCAGGACCCACTCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 72 bp TCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTaGGGCTCTTACACAGAATGTGTTCCACCCACAGAA +
Preference number: 3 (lower is better)
Translates to: SGVAVTPLQSPQ*GSYTECVPPTE
Trigger: TTCTGTGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
3UTR CCA 72 bp ATGGGGCATGCCAACCTTGGTGGCATCAAAGCCACGTaGGCTTGCCAGAAAAGCCAATCTCAGAGCCCTCCT +
Preference number: 3 (lower is better)
Translates to: MGHANLGGIKAT*ACQKSQSQSPP
Trigger: AGGAGGGCTCTGAGATTGGCTTTTCTGGCAAGCCCACGTGGCTTTGATGCCACCAAGGTTGGCATGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 72 bp GTCACGAAGGAAGACAATGGGGCATGCCAACCTTGGTaGCATCAAAGCCACGTGGGCTTGCCAGAAAAGCCA +
Preference number: 3 (lower is better)
Translates to: VTKEDNGACQPW*HQSHVGLPEKP
Trigger: TGGCTTTTCTGGCAAGCCCACGTGGCTTTGATGCCACCAAGGTTGGCATGCCCCATTGTCTTCCTTCGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 72 bp CCTGTCACGAAGGAAGACAATGGGGCATGCCAACCTTaGTGGCATCAAAGCCACGTGGGCTTGCCAGAAAAG +
Preference number: 3 (lower is better)
Translates to: PVTKEDNGACQP*WHQSHVGLPEK
Trigger: CTTTTCTGGCAAGCCCACGTGGCTTTGATGCCACCAAGGTTGGCATGCCCCATTGTCTTCCTTCGTGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 72 bp GTGCTCCACTTGACCCTATGGGACCATCCATTTTTCTaGGCTGGCCTGACCTTGCCCGATGAAGGCATGACT +
Preference number: 3 (lower is better)
Translates to: VLHLTLWDHPFF*AGLTLPDEGMT
Trigger: AGTCATGCCTTCATCGGGCAAGGTCAGGCCAGCTCAGAAAAATGGATGGTCCCATAGGGTCAAGTGGAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 72 bp CCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATaGAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTT +
Preference number: 3 (lower is better)
Translates to: PHFRLRMVTGVS*SGTLWCLISGV
Trigger: AACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
3UTR GCA 72 bp TCAACTGGATCACAGTTTTCTTCAAAGTCCGCCTCTTaGAGGTGGCCAGGCCAGGAGTCTCCAGCCAGCTTT +
Preference number: 3 (lower is better)
Translates to: STGSQFSSKSAS*RWPGQESPASF
Trigger: AAAGCTGGCTGGAGACTCCTGGCCTGGCCACCTGCAAGAGGCGGACTTTGAAGAAAACTGTGATCCAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR GCA 72 bp GGAACAGGGCAGAGTAGCGGTTCCAGAGCCAGAAGTTaGCATCAGGTAAGCATTAAACAGCACAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: GTGQSSGSRARS*HQVSIKQHSSS
Trigger: GCTGCTGCTGTGCTGTTTAATGCTTACCTGATGGCAACTTCTGGCTCTGGAACCGCTACTCTGCCCTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR CAA 90 bp TGCTCCCAGAGACCCCGGAGTCACAAGGCTGCTTGTAGAGCAGCAGCTCTGTTCATTGCTCAGGACACCTaGCATTTAGCTGCTTTTCTC +
Preference number: 3 (lower is better)
Translates to: CSQRPRSHKAACRAAALFIAQDT*HLAAFL
Trigger: GAGAAAAGCAGCTAAATGCAAGGTGTCCTGAGCAAT...GAACAGAGCTGCTGCTCTACAAGCAGCCTTGTGACTCCGGGGTCTCTGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 72 bp CAGCCAGCTTTCACCCACCCTTCAATCAACAAATCCTaGGAGCCCACTCTGGGTCAAGTATGTGCTGACCTG +
Preference number: 3 (lower is better)
Translates to: QPAFTHPSINKS*EPTLGQVCADL
Trigger: CAGGTCAGCACATACTTGACCCAGAGTGGGCTCTCAGGATTTGTTGATTGAAGGGTGGGTGAAAGCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 72 bp ACCTTGCCCGATGAAGGCATGACTGAGGCCATGCTTTaGAGGTCCTCTAATTGCTCAGGACACCTTGCATTT +
Preference number: 3 (lower is better)
Translates to: TLPDEGMTEAML*RSSNCSGHLAF
Trigger: AAATGCAAGGTGTCCTGAGCAATTAGAGGACCTCCAAAGCATGGCCTCAGTCATGCCTTCATCGGGCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 72 bp AAAGCAGCATTCCCCTCAGGGACAAAGTGGCTCAACTaGATCACAGTTTTCTTCAAAGTCCGCCTCTTGCAG +
Preference number: 3 (lower is better)
Translates to: KAAFPSGTKWLN*ITVFFKVRLLQ
Trigger: CTGCAAGAGGCGGACTTTGAAGAAAACTGTGATCCAGTTGAGCCACTTTGTCCCTGAGGGGAATGCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CCA 72 bp GAAAGCTGCAAAGCAGCATTCCCCTCAGGGACAAAGTaGCTCAACTGGATCACAGTTTTCTTCAAAGTCCGC +
Preference number: 3 (lower is better)
Translates to: ESCKAAFPSGTK*LNWITVFFKVR
Trigger: GCGGACTTTGAAGAAAACTGTGATCCAGTTGAGCCACTTTGTCCCTGAGGGGAATGCTGCTTTGCAGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 72 bp TGCCACTCTTGTCCTGGGGCTGGAATTTGGTTGTATTaGTCAATGCTGGAATTAATGGGTCAACGGGAGGGA +
Preference number: 3 (lower is better)
Translates to: CHSCPGAGIWLY*SMLELMGQREG
Trigger: TCCCTCCCGTTGACCCATTAATTCCAGCATTGATCAATACAACCAAATTCCAGCCCCAGGACAAGAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR CAA 90 bp GCCCTTACTGGCCCTCTCTCTAGGTGTAGACACAGAAGGTTTGGGGCACTGAGTTTAAGATATAGTTTGTaGGAGCATGTAGCTCCAAAG +
Preference number: 3 (lower is better)
Translates to: ALTGPLSRCRHRRFGALSLRYSL*EHVAPK
Trigger: CTTTGGAGCTACATGCTCCAACAAACTATATCTTAA...ACTCAGTGCCCCAAACCTTCTGTGTCTACACCTAGAGAGAGGGCCAGTAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR-3UTR CAA 90 bp CTCAGAGACTTGTTTCCATGGAGAAGTAGCCTCACTATAAGTGGTATTGAAAGCGCTCCCCAAATCCACTaGGGTAAAGTGAGGCAGGCT +
Preference number: 3 (lower is better)
Translates to: LRDLFPWRSSLTISGIESAPQIH*GKVRQA
Trigger: AGCCTGCCTCACTTTACCCAAGTGGATTTGGGGAGC...GCTTTCAATACCACTTATAGTGAGGCTACTTCTCCATGGAAACAAGTCTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 72 bp AAAATAAAAACACTTCACACTCCAGAACACTGCTCATaGTTTCACCTGCAGTGTGCAGGCTGCAAGGTGCAG +
Preference number: 3 (lower is better)
Translates to: KIKTLHTPEHCS*FHLQCAGCKVQ
Trigger: CTGCACCTTGCAGCCTGCACACTGCAGGTGAAATCATGAGCAGTGTTCTGGAGTGTGAAGTGTTTTTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 72 bp ATCAATGCTGGAATTAATGGGTCAACGGGAGGGACCTaGCTCAGTAATACTAGCCATATAGAGTTTGCCTTG +
Preference number: 3 (lower is better)
Translates to: INAGINGSTGGT*LSNTSHIEFAL
Trigger: CAAGGCAAACTCTATATGGCTAGTATTACTGAGTCAGGTCCCTCCCGTTGACCCATTAATTCCAGCATTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR TCA 72 bp ACAGGCAAGATTCTCCCGAACTCACTCTGGGAAATGTaGTCTGAAAACCTTCCTGGTTTCATTTCTTGGATT +
Preference number: 3 (lower is better)
Translates to: TGKILPNSLWEM*SENLPGFISWI
Trigger: AATCCAAGAAATGAAACCAGGAAGGTTTTCAGATCACATTTCCCAGAGTGAGTTCGGGAGAATCTTGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp TCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTGGGTGCCCCCACTaGGACATGCTCTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: SGASSLGLLSLRCRALSGAGCPH*DMLCGR
Trigger: CCTTCCGCAGAGCATGTCTCAGTGGGGGCACCCAGC...CCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTCTGCTGCCAAAGTGCTaGCAGCCCAGGCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSGASSLGLLSLRCRALSLLPKC*QPRRQG
Trigger: GCCCTGCCGCCTGGGCTGTCAGCACTTTGGCAGCAG...ACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp GGCACAGCTGTGGCTCTAGGGGGTCCAGCAGGGGAAATGCCAGAGGCCTGGTCAAGGAGGGGCCCTGCTTaGATCAGGTTGGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: GTAVALGGPAGEMPEAWSRRGPA*IRLGSG
Trigger: GCCACTTCCCAACCTGATTCAAGCAGGGCCCCTCCT...TGACCAGGCCTCTGGCATTTCCCCTGCTGGACCCCCTAGAGCCACAGCTGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCCCCACAGCAATGTGTaGCAGTCTGGCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GTLWCLISGVAVTPLQSPPHSNV*QSGWPA
Trigger: GGCTGGCCAGCCAGACTGGCACACATTGCTGTGGGG...AGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp TGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCAGCAGTTGGCCAAGATaGAGCCCACGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: WHSLVPHLWGCCHSAAEPSSWPR*SPRCHT
Trigger: GGTGTGGCAGCGTGGGCTTCATCTTGGCCAACTGCT...GGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp GGCACAGCTGTGGCTCTAGGGGGTCCAGCAGGGGAAATGCCAGAGGCCTGGTCACAGGGACTCCAAGACTaGAGCAGCCACAGCAACGTC +
Preference number: 4 (lower is better)
Translates to: GTAVALGGPAGEMPEAWSQGLQD*SSHSNV
Trigger: GACGTTGCTGTGGCTGCTGCAGTCTTGGAGTCCCTG...TGACCAGGCCTCTGGCATTTCCCCTGCTGGACCCCCTAGAGCCACAGCTGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTTGCTGTCCCGAGAGTTaGTCCCAGACAGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ASSLGLLSLRCRALSGALCCPES*SQTEGP
Trigger: GGGGCCTTCTGTCTGGGAGCAACTCTCGGGACAGCA...AAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp GGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTTTGCTGTCACTCCGCTaGAGAGCCCTCAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GTLWCLISGVAVTPLQSPLLSLR*RALSGA
Trigger: AGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAA...AGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp GCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTGGAGGGAAGGAGGACTaGCTTCCGTGTGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ASSLGLLSLRCRALSGALGGKED*LPCVLH
Trigger: GTGGAGCACACACGGAAGGCAGTCCTCCTTCCCTCC...AAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp CCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCCTGTGGCTCCAGTCTCGCTaGGTGCCCCCACTGAGACAT +
Preference number: 4 (lower is better)
Translates to: PTELPIAGPGASGVQASLWLQSR*VPPLRH
Trigger: ATGTCTCAGTGGGGGCACCCAGCGAGACTGGAGCCA...CAGGGAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp TCCCTGAGGCACAGCTGTGGCTCTAGGGGGTCCAGCAGGGGAAATGCCAGAGGCGACCATCCATTTTTCTaGGCTGGCCTGACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SLRHSCGSRGSSRGNARGDHPFF*AGLTLP
Trigger: GGGCAAGGTCAGGCCAGCTCAGAAAAATGGATGGTC...GCCTCTGGCATTTCCCCTGCTGGACCCCCTAGAGCCACAGCTGTGCCTCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp GGCACAGCTGTGGCTCTAGGGGGTCCAGCAGGGGAAATGCCAGAGGCCTGGTCATGTATGCAAGCTCCCTaGGGCACAGCTGTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: GTAVALGGPAGEMPEAWSCMQAP*GTAVAL
Trigger: TAGAGCCACAGCTGTGCCTCAGGGAGCTTGCATACA...TGACCAGGCCTCTGGCATTTCCCCTGCTGGACCCCCTAGAGCCACAGCTGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp CCTAGATACAGGGAAGCAGGACACCGGAAGAAGCCCTGGGCTGCCTTTGCGGCTTGCTGTCCCGAGAGTTaGTCCCAGACAGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PRYREAGHRKKPWAAFAACCPES*SQTEGP
Trigger: GGGGCCTTCTGTCTGGGAGCAACTCTCGGGACAGCA...AGCCGCAAAGGCAGCCCAGGGCTTCTTCCGGTGTCCTGCTTCCCTGTATCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp CTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTACCATAGCTGGTCCAGGTaGCTCGGGTGTCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LISGVAVTPLQSPQWGSYHSWSR*LGCPGF
Trigger: GAAGCCTGGACACCCGAGGCACCTGGACCAGCTATG...GTAAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp GCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGACATAGCTGGTCCAGGTaGCTCGGGTGTCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: AVALSGASSLGLLSLRCRHSWSR*LGCPGF
Trigger: GAAGCCTGGACACCCGAGGCACCTGGACCAGCTATG...TCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp TCCACCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCTTGCTGTCACTCCGCTaGAGAGCCCTCAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: STHRTTHSWSRCLGCPGFLLSLR*RALSGA
Trigger: AGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAA...GAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp ACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCCCAGGCCCCCATGCCTaGCACTCTTGTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TGVSCSGTLWCLISGVAVPGPHA*HSCPGA
Trigger: AGCCCCAGGACAAGAGTGGCAGGCATGGGGGCCTGG...GACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp TCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGAACCTGCCAGGTGACTaGGCCCCAGTCTTGGTGTAC +
Preference number: 4 (lower is better)
Translates to: SGASSLGLLSLRCRALSGNLPGD*APVLVY
Trigger: GTACACCAAGACTGGGGCCCAGTCACCTGGCAGGTT...CCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp GCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTACGTCCTCCTGCTTCTaGAGTGTGGCATCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: ASSLGLLSLRCRALSGALTSSCF*SVASFP
Trigger: GGGAAAGGATGCCACACTTCAGAAGCAGGAGGACGT...AAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp TGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCCAAAGCCAAAAACAGTaGTGGTCAGGCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: WHSLVPHLWGCCHSAAEPQSQKQ*WSGRPA
Trigger: TGCTGGCCGGCCTGACCATCACTGTTTTTGGCTTTG...GGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp CTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTAACAGGACCGGATCCTaGGCTAAGCATGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LSGASSLGLLSLRCRALSNRTGS*AKHGPS
Trigger: GGAGGGACCATGCTTAGCTCAGGATCCGGTCCTGTT...ACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp TGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTTTTCTGAGCTGGCCTaGCCTTGCCCGATGAAGGCA +
Preference number: 4 (lower is better)
Translates to: WHSLVPHLWGCCHSAAEPFSELA*PCPMKA
Trigger: TGCCTTCATCGGGCAAGGTCAGGCCAGCTCAGAAAA...GGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGACAGGGACTCCAAGACTaGAGCAGCCACAGCAACGTC +
Preference number: 4 (lower is better)
Translates to: AVALSGASSLGLLSLRCRQGLQD*SSHSNV
Trigger: GACGTTGCTGTGGCTGCTGCAGTCTTGGAGTCCCTG...TCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp GCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTGTCACAGGTGTCTCATaGAGTGGCACTCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ASSLGLLSLRCRALSGALVTGVS*SGTLWC
Trigger: GCACCAGAGAGTGCCACTGCATGAGACACCTGTGAC...AAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp CCTAGATACAGGGAAGCAGGACACCGGAAGAAGCCCTGGGCTGCCTTTGCGGCTGCTGGCCCACATGTATaGAAGCTCCCTGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: PRYREAGHRKKPWAAFAAAGPHV*KLPEAQ
Trigger: CTGTGCCTCAGGGAGCTTGCATACATGTGGGCCAGC...AGCCGCAAAGGCAGCCCAGGGCTTCTTCCGGTGTCCTGCTTCCCTGTATCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGAGATCGCGCTACTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: GVSCSGTLWCLISGVAVTPRSRY*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTAGCGCGATCTCGG...AGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp GGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTGTGTGCCAGTCTGGCTaGCCAGCCCTGCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: GVSCSGTLWCLISGVAVTVCQSG*PALLTA
Trigger: TGCTGTGAGCAGGGCTGGCCAGCCAGACTGGCACAC...AGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp CCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCCTGTGCAGTGGCACTCTCTaGTGCCTCATCTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PTELPIAGPGASGVQASLCSGTL*CLISGV
Trigger: AACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCA...CAGGGAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp TGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCAAGGTGCAGAACACCTaGGCTCACACTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: WHSLVPHLWGCCHSAAEPKVQNT*AHTVAW
Trigger: CCAGGCTACAGTGTGAGCCCAGGTGTTCTGCACCTT...GGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp GCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGACCTGAAGGCCTGGAGTaGGTCCTGGGAAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: AVALSGASSLGLLSLRCRPEGLE*VLGSHV
Trigger: AACATGGCTTCCCAGGACCCACTCCAGGCCTTCAGG...TCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp GGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGCAGCTCTGTTCCTaGAGCAGAGAACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: GTLWCLISGVAVTPLQSPQQLCS*SREQAL
Trigger: CAGTGCCTGTTCTCTGCTCCAGGAACAGAGCTGCTG...AGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp GCCCTTACTGGCCCTCTCTCTAGGTGTAGACACAGAAGGTTTGGGGCACTGAGTCACCGGAAGAAGCCCTaGGCTGCCTTTGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALTGPLSRCRHRRFGALSHRKKP*AAFAAG
Trigger: GCCAGCCGCAAAGGCAGCCCAGGGCTTCTTCCGGTG...ACTCAGTGCCCCAAACCTTCTGTGTCTACACCTAGAGAGAGGGCCAGTAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATGGGTCAAGTATGTGCTaGCCTGGGGCGGCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: QTSNGHRCLMQWHSLVPHGSSMC*PGAAGN
Trigger: GTTCCCCGCCGCCCCAGGTCAGCACATACTTGACCC...ATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp GAAGGAGGACTGCCTTCCGTGTGTGCTCCACTTGACCCTATGGGACCATCCATTGGGAGACACAGACCCTaGAGGCCTGGAGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: EGGLPSVCAPLDPMGPSIGRHRP*RPGVGP
Trigger: AGGACCCACTCCAGGCCTTCAGGGTCTGTGTCTCCC...AATGGATGGTCCCATAGGGTCAAGTGGAGCACACACGGAAGGCAGTCCTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp GGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTGGAGGGATGAGAGAGTaGGCACTGCCTTCAGACATA +
Preference number: 4 (lower is better)
Translates to: GTLWCLISGVAVTPLQSPGGMRE*ALPSDI
Trigger: TATGTCTGAAGGCAGTGCTCACTCTCTCATCCCTCC...AGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp CTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTACAACCGAAACAACACCTaGAGGAGGAGACCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LISGVAVTPLQSPQWGSYNRNNT*RRRPEE
Trigger: CTCCTCCGGTCTCCTCCTGCAGGTGTTGTTTCGGTT...GTAAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp CCGCTGCAGAGCCCTCAGTGGGGCTCTTACACAGAATGTGTTCCACCCACAGAAGCCCCCACTGAGACATaGTCTGCGGAAGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PLQSPQWGSYTECVPPTEAPTET*SAEGLS
Trigger: AGAGAGGCCTTCCGCAGAGCATGTCTCAGTGGGGGC...TTCTGTGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp TCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGCTGGCTGGCCAGCCCTaGTCACAGCAGAGGAATACC +
Preference number: 4 (lower is better)
Translates to: SQVSHAVALSGASSLGLLLAGQP*SQQRNT
Trigger: GGTATTCCTCTGCTGTGAGCAGGGCTGGCCAGCCAG...CAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp TGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGGCTGGCCAGCCCTaGTCACAGCAGAGGAATACC +
Preference number: 4 (lower is better)
Translates to: WSQVSHAVALSGASSLGLLAGQP*SQQRNT
Trigger: GGTATTCCTCTGCTGTGAGCAGGGCTGGCCAGCCAG...CAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp GCCCTTACTGGCCCTCTCTCTAGGTGTAGACACAGAAGGTTTGGGGCACTGAGTCCCCACAGCAATGTGTaGCAGTCTGGCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ALTGPLSRCRHRRFGALSPHSNV*QSGWPA
Trigger: GGCTGGCCAGCCAGACTGGCACACATTGCTGTGGGG...ACTCAGTGCCCCAAACCTTCTGTGTCTACACCTAGAGAGAGGGCCAGTAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GCAGGCTGCAAGGTGCAGAACACCTGGGCTCACACTGTAGCCTGGAGTACCAGGAGTGGCACTCTCTGGTaGCTCATCTCTGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: AGCKVQNTWAHTVAWSTRSGTLW*LISGVA
Trigger: AGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACT...CCTGGTACTCCAGGCTACAGTGTGAGCCCAGGTGTTCTGCACCTTGCAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp CTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTAGTGGCACTCTCTGGTaGCTCATCTCTGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSGASSLGLLSLRCRALSSGTLW*LISGVA
Trigger: AGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACT...ACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp CCGCTGCAGAGCCCTCAGTGGGGCTCTTACACAGAATGTGTTCCACCCACAGAATCAAAGTCCGCCTCTTaGAGGTGGCCAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PLQSPQWGSYTECVPPTESKSAS*RWPGQE
Trigger: CTCCTGGCCTGGCCACCTGCAAGAGGCGGACTTTGA...TTCTGTGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTAGTACCAGGCCCCCATaGCTGCCACTCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GVSCSGTLWCLISGVAVTSTRPP*LPLLSW
Trigger: CCAGGACAAGAGTGGCAGGCATGGGGGCCTGGTACT...AGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTGCTCATGATTTCACCTaGAGTGTGCAGGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: GTLWCLISGVAVTPLQSPAHDFT*SVQAAR
Trigger: CCTTGCAGCCTGCACACTGCAGGTGAAATCATGAGC...AGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GGCACAGCTGTGGCTCTAGGGGGTCCAGCAGGGGAAATGCCAGAGGCCTGGTCAATGCATGATAGGAGTTaGCCTTACTGGCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: GTAVALGGPAGEMPEAWSMHDRS*PYWPSL
Trigger: GAGAGAGGGCCAGTAAGGGCAACTCCTATCATGCAT...TGACCAGGCCTCTGGCATTTCCCCTGCTGGACCCCCTAGAGCCACAGCTGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp TGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGGTCCAGCAGGGGAAATaGCAGAGGCCTGGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: WSQVSHAVALSGASSLGLVQQGK*QRPGQV
Trigger: GACCTGACCAGGCCTCTGGCATTTCCCCTGCTGGAC...CAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp CTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTAGAACTACCCATAGCTaGTCCAGGTGCCTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: LSGASSLGLLSLRCRALSRTTHS*SRCLGC
Trigger: ACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCT...ACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp GTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGGTGCCTCATCTCTaGGGTTGCTGTCACTCCGCT +
Preference number: 4 (lower is better)
Translates to: VSCSGTLWCLISGVAVTPLVPHL*GCCHSA
Trigger: AGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAG...CGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp CCTGCTGCCAAAGTGCTGACAGCCCAGGCGGCAGGGCTAGTCCTGGGAAAACACACCAACAGTTACCTGTaGCCAGAGGAGCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: PAAKVLTAQAAGLVLGKHTNSYL*PEEHRK
Trigger: CTTCCTGTGCTCCTCTGGCCACAGGTAACTGTTGGT...GTGTTTTCCCAGGACTAGCCCTGCCGCCTGGGCTGTCAGCACTTTGGCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp CTGCAAGGTGCAGAACACCTGGGCTCACACTGTAGCCTGGAGTACCAGGCCCCCAATCAGGTTGGGAAGTaGCTGGGAACAGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LQGAEHLGSHCSLEYQAPNQVGK*LGTGQS
Trigger: ACTCTGCCCTGTTCCCAGCCACTTCCCAACCTGATT...GGGGGCCTGGTACTCCAGGCTACAGTGTGAGCCCAGGTGTTCTGCACCTTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp AGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACAACAGGACCGGATCCTaGGCTAAGCATGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: RCLMQWHSLVPHLWGCCHNRTGS*AKHGPS
Trigger: GGAGGGACCATGCTTAGCTCAGGATCCGGTCCTGTT...GTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp TCCACCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCTGGGCACACCTAACTaGGTCCTGAGGAAATGGATC +
Preference number: 4 (lower is better)
Translates to: STHRTTHSWSRCLGCPGFLGTPN*VLRKWI
Trigger: GATCCATTTCCTCAGGACTCAGTTAGGTGTGCCCAG...GAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp CAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATAAGAGGAGCTGGCCCTaGCAGCAGCACTGGGCGAAC +
Preference number: 4 (lower is better)
Translates to: QTSNGHRCLMQWHSLVPHKRSWP*QQHWAN
Trigger: GTTCGCCCAGTGCTGCTGTCAGGGCCAGCTCCTCTT...ATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp GGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTGCAGCAGCTCCTCACTaGGAGACCCCAAGCCAAATC +
Preference number: 4 (lower is better)
Translates to: GVSCSGTLWCLISGVAVTAAAPH*ETPSQI
Trigger: GATTTGGCTTGGGGTCTCTCAGTGAGGAGCTGCTGC...AGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CCGCTGCAGAGCCCTCAGTGGGGCTCTTACACAGAATGTGTTCCACCCACAGAAGGCAAGAGAATCGCTTaGACCCAGGAGGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: PLQSPQWGSYTECVPPTEGKRIA*TQEAEL
Trigger: GAGCTCTGCCTCCTGGGTTCAAGCGATTCTCTTGCC...TTCTGTGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CCTAGATACAGGGAAGCAGGACACCGGAAGAAGCCCTGGGCTGCCTTTGCGGCTGGCGAGAGGAGAGAGTaGGACCTTGTCTCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: PRYREAGHRKKPWAAFAAGERRE*DLVSEK
Trigger: CTTTTCAGAGACAAGGTCTCACTCTCTCCTCTCGCC...AGCCGCAAAGGCAGCCCAGGGCTTCTTCCGGTGTCCTGCTTCCCTGTATCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp ATGTGTTCCACCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCACTTCAAGCAGCTaGAACCAGATCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: MCSTHRTTHSWSRCLGCPGTSSS*NQIQPR
Trigger: CCTGGGCTGGATCTGGTTGCAGCTGCTTGAAGTGCC...TGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGGTGGAACACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp CCTGCTGCCAAAGTGCTGACAGCCCAGGCGGCAGGGCTAGTCCTGGGAAAACACAAAGCCACGTGGGCTTaGCAGAAAAGCCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: PAAKVLTAQAAGLVLGKHKATWA*QKSQSQ
Trigger: CTGAGATTGGCTTTTCTGGCAAGCCCACGTGGCTTT...GTGTTTTCCCAGGACTAGCCCTGCCGCCTGGGCTGTCAGCACTTTGGCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp CCCCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTAAGCCTGGGGAGTCCTaGTCCCAGAGACCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: PRISDFEWSQVSHAVALSKPGES*SQRPRS
Trigger: ACTCCGGGGTCTCTGGGAGCAGGACTCCCCAGGCTT...AGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp TCCACCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCCTGCTTCTGAAGTGTaGCATCCTTTCCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: STHRTTHSWSRCLGCPGFPASEV*HPFPSP
Trigger: TGGAGAGGGGAAAGGATGCCACACTTCAGAAGCAGG...GAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp CAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATGTGTGCCAGTCTGGCTaGCCAGCCCTGCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: QTSNGHRCLMQWHSLVPHVCQSG*PALLTA
Trigger: TGCTGTGAGCAGGGCTGGCCAGCCAGACTGGCACAC...ATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp GTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCTTTTGTCAGTGCGTCTaGGCACACCTAACTGAGTCC +
Preference number: 4 (lower is better)
Translates to: VALSGASSLGLLSLRCRAFCQCV*AHLTES
Trigger: GGACTCAGTTAGGTGTGCCCAGACGCACTGACAAAA...GGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp CTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTACAGGTGTCTCATGCAGTaGCACTCTCTGGTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LISGVAVTPLQSPQWGSYRCLMQ*HSLVPH
Trigger: ATGAGGCACCAGAGAGTGCCACTGCATGAGACACCT...GTAAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp GCAGGCTGCAAGGTGCAGAACACCTGGGCTCACACTGTAGCCTGGAGTACCAGGTTAATCCTTAGCCCCTaGGTACTGGCTCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: AGCKVQNTWAHTVAWSTRLILSP*VLALGK
Trigger: CTTGCCCAGAGCCAGTACCCAGGGGCTAAGGATTAA...CCTGGTACTCCAGGCTACAGTGTGAGCCCAGGTGTTCTGCACCTTGCAGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp GCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTGAAGGTCCCTTTCTGTaGATGCCAGGGACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ASSLGLLSLRCRALSGALEGPFL*MPGTEK
Trigger: TTTCTCTGTCCCTGGCATCCACAGAAAGGGACCTTC...AAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp GAAGGAGGACTGCCTTCCGTGTGTGCTCCACTTGACCCTATGGGACCATCCATTGAGAGAGCACAAGCCTaGGGAGTCCTGCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: EGGLPSVCAPLDPMGPSIERAQA*GVLLPE
Trigger: CTCTGGGAGCAGGACTCCCCAGGCTTGTGCTCTCTC...AATGGATGGTCCCATAGGGTCAAGTGGAGCACACACGGAAGGCAGTCCTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp GCCCTTACTGGCCCTCTCTCTAGGTGTAGACACAGAAGGTTTGGGGCACTGAGTTTAGCCACAGCAGGTTaGGGGTCTGGCTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: ALTGPLSRCRHRRFGALSLATAG*GSGSSL
Trigger: GAGACTGGAGCCAGACCCTCAACCTGCTGTGGCTAA...ACTCAGTGCCCCAAACCTTCTGTGTCTACACCTAGAGAGAGGGCCAGTAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTACGTCCTCCTGCTTCTaGAGTGTGGCATCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: HRCLMQWHSLVPHLWGCCTSSCF*SVASFP
Trigger: GGGAAAGGATGCCACACTTCAGAAGCAGGAGGACGT...ACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp ATGTGTTCCACCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCACAAAGCCAAAAACAGTaGTGGTCAGGCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: MCSTHRTTHSWSRCLGCPQSQKQ*WSGRPA
Trigger: TGCTGGCCGGCCTGACCATCACTGTTTTTGGCTTTG...TGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGGTGGAACACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp CCGCTGCAGAGCCCTCAGTGGGGCTCTTACACAGAATGTGTTCCACCCACAGAATCAGCTTGGTCTCTGTaGGGAATGCTGTCCCGAGAG +
Preference number: 4 (lower is better)
Translates to: PLQSPQWGSYTECVPPTESAWSL*GMLSRE
Trigger: CTCTCGGGACAGCATTCCTCACAGAGACCAAGCTGA...TTCTGTGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp GGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTTCAGCTTGGTCTCTGTaGGGAATGCTGTCCCGAGAG +
Preference number: 4 (lower is better)
Translates to: GVSCSGTLWCLISGVAVTSAWSL*GMLSRE
Trigger: CTCTCGGGACAGCATTCCTCACAGAGACCAAGCTGA...AGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp CCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCCTGGTGTCCAGGCTTCCCTaGAGTCATGTCATTTTGTCA +
Preference number: 4 (lower is better)
Translates to: PTELPIAGPGASGVQASLVSRLP*SHVILS
Trigger: TGACAAAATGACATGACTTCAGGGAAGCCTGGACAC...CAGGGAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp TCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGCGTGTGTGCTCCACTTaGCCCTATGGGACCATCCAT +
Preference number: 4 (lower is better)
Translates to: SQVSHAVALSGASSLGLLRVCST*PYGTIH
Trigger: ATGGATGGTCCCATAGGGTCAAGTGGAGCACACACG...CAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp TTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGCTGGTCAGGTCCAGCTaGGCTTTAGGGAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: FEWSQVSHAVALSGASSLLVRSS*ALGRHQ
Trigger: CTGGTGCCTCCCTAAAGCTCAGCTGGACCTGACCAG...CAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp CAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGTACCGACAGGCTCTCTaGAATCACCTTGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QWHSLVPHLWGCCHSAAEYRQAL*NHLELH
Trigger: GTGAAGCTCAAGGTGATTGCAGAGAGCCTGTCGGTA...CTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp CAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGATGAAGCAAAGGCTCTaGGTGATCCGAATGCCCATG +
Preference number: 4 (lower is better)
Translates to: QWHSLVPHLWGCCHSAAEMKQRL*VIRMPM
Trigger: CATGGGCATTCGGATCACGCAGAGCCTTTGCTTCAT...CTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp CACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTGGTCTCTGTGAGGAATaGTGTCCCGAGAGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: HRCLMQWHSLVPHLWGCCGLCEE*CPESCS
Trigger: GGAGCAACTCTCGGGACAGCATTCCTCACAGAGACC...ACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp GGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTGGTCTCTGTGAGGAATaGTGTCCCGAGAGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GVSCSGTLWCLISGVAVTGLCEE*CPESCS
Trigger: GGAGCAACTCTCGGGACAGCATTCCTCACAGAGACC...AGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp TCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGGAACCACAGAGGACCTaGTGCCAAAGTGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: SQVSHAVALSGASSLGLLEPQRT*CQSADS
Trigger: GCTGTCAGCACTTTGGCAGCAGGTCCTCTGTGGTTC...CAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTAGGAAGGAGGGGCCCTaGTTGAATCAGGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GVSCSGTLWCLISGVAVTRKEGP*LNQVGK
Trigger: CTTCCCAACCTGATTCAAGCAGGGCCCCTCCTTCCT...AGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp TGCTCCCAGAGACCCCGGAGTCACAAGGCTGCTTGTAGAGCAGCAGCTCTGTTCCCTGCTTCTGAAGTGTaGCATCCTTTCCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: CSQRPRSHKAACRAAALFPASEV*HPFPSP
Trigger: TGGAGAGGGGAAAGGATGCCACACTTCAGAAGCAGG...GAACAGAGCTGCTGCTCTACAAGCAGCCTTGTGACTCCGGGGTCTCTGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp GCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGATTTTGTCAGTGCGTCTaGGCACACCTAACTGAGTCC +
Preference number: 4 (lower is better)
Translates to: AVALSGASSLGLLSLRCRFCQCV*AHLTES
Trigger: GGACTCAGTTAGGTGTGCCCAGACGCACTGACAAAA...TCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp ACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCAGAACTACCCATAGCTaGTCCAGGTGCCTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: TGVSCSGTLWCLISGVAVRTTHS*SRCLGC
Trigger: ACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCT...GACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp GTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTaGGGCTCTTACACAGAATGT +
Preference number: 4 (lower is better)
Translates to: VSCSGTLWCLISGVAVTPLQSPQ*GSYTEC
Trigger: ACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAG...CGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp CCGCTGCAGAGCCCTCAGTGGGGCTCTTACACAGAATGTGTTCCACCCACAGAATGCAGTGGCACTCTCTaGTGCCTCATCTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PLQSPQWGSYTECVPPTECSGTL*CLISGV
Trigger: AACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCA...TTCTGTGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp GCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGACTGCCACTCTTGTCCTaGGGCTGGAATTTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: AVALSGASSLGLLSLRCRLPLLS*GWNLVV
Trigger: TACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAG...TCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp ATGAGGACTGAAGGTCCCTTTCTGTGGATGCCAGGGACAGAGAAAGGACATGGGGCTCACACTGTAGCCTaGAGTACCAGGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: MRTEGPFLWMPGTEKGHGAHTVA*STRPPC
Trigger: GCATGGGGGCCTGGTACTCCAGGCTACAGTGTGAGC...CCCATGTCCTTTCTCTGTCCCTGGCATCCACAGAAAGGGACCTTCAGTCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp CACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCCTGAACACGAAGGAAGACAATaGGGCATGCCAACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HRTTHSWSRCLGCPGFPEHEGRQ*GMPTLV
Trigger: CACCAAGGTTGGCATGCCCCATTGTCTTCCTTCGTG...TTCAGGGAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp CACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCCTGAACTGCTTGAATCAGGTTaGGAAGTGGCTGGGAACAGG +
Preference number: 4 (lower is better)
Translates to: HRTTHSWSRCLGCPGFPELLESG*EVAGNR
Trigger: CCTGTTCCCAGCCACTTCCCAACCTGATTCAAGCAG...TTCAGGGAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp TCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGATGTACAATCCCCAGTaGGGCAACCACAGCACGAGA +
Preference number: 4 (lower is better)
Translates to: SQVSHAVALSGASSLGLLMYNPQ*GNHSTR
Trigger: TCTCGTGCTGTGGTTGCCTCACTGGGGATTGTACAT...CAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp ACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCATGTACAATCCCCAGTaGGGCAACCACAGCACGAGA +
Preference number: 4 (lower is better)
Translates to: TGVSCSGTLWCLISGVAVMYNPQ*GNHSTR
Trigger: TCTCGTGCTGTGGTTGCCTCACTGGGGATTGTACAT...GACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp GGAAAACACGCAGCCACATGTACAACTCTCCCTAGATACAGGGAAGCAGGACACAGCAGTTGGCCAAGATaGAGCCCACGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: GKHAATCTTLPRYREAGHSSWPR*SPRCHT
Trigger: GGTGTGGCAGCGTGGGCTTCATCTTGGCCAACTGCT...GTGTCCTGCTTCCCTGTATCTAGGGAGAGTTGTACATGTGGCTGCGTGTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CCGCTGCAGAGCCCTCAGTGGGGCTCTTACACAGAATGTGTTCCACCCACAGAACTGGGCACACCTAACTaGGTCCTGAGGAAATGGATC +
Preference number: 4 (lower is better)
Translates to: PLQSPQWGSYTECVPPTELGTPN*VLRKWI
Trigger: GATCCATTTCCTCAGGACTCAGTTAGGTGTGCCCAG...TTCTGTGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp GCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGTGTCCAGGCTTCCCTaGAGTCATGTCATTTTGTCA +
Preference number: 4 (lower is better)
Translates to: AVALSGASSLGLLSLRCRVSRLP*SHVILS
Trigger: TGACAAAATGACATGACTTCAGGGAAGCCTGGACAC...TCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp GCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTCTCAGACCACAGTTTTaGCACAAAGAAAGCCACAAC +
Preference number: 4 (lower is better)
Translates to: ASSLGLLSLRCRALSGALLRPQF*HKESHN
Trigger: GTTGTGGCTTTCTTTGTGTCAAAACTGTGGTCTGAG...AAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTCCACTTGGGTAAAGTaGGGCAGGCTGGCCCACATG +
Preference number: 4 (lower is better)
Translates to: PHFRLRMVTGVSCSGTLWSTWVK*GRLAHM
Trigger: CATGTGGGCCAGCCTGCCTCACTTTACCCAAGTGGA...CCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp TGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCATTAAACCAGGGGACTaGTGTGAAACTAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: WHSLVPHLWGCCHSAAEPIKPGD*CETSNR
Trigger: CCTGTTGCTAGTTTCACATCAGTCCCCTGGTTTAAT...GGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp TTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGCACTTCAAGCAGCTaGAACCAGATCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FEWSQVSHAVALSGASSLGTSSS*NQIQPR
Trigger: CCTGGGCTGGATCTGGTTGCAGCTGCTTGAAGTGCC...CAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp CCTGCTGCCAAAGTGCTGACAGCCCAGGCGGCAGGGCTAGTCCTGGGAAAACACAAACATATGTGCTTGTaGCAAGACCCAAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: PAAKVLTAQAAGLVLGKHKHMCL*QDPKGL
Trigger: GAGCCCTTTTGGGTCTTGGCACAAGCACATATGTTT...GTGTTTTCCCAGGACTAGCCCTGCCGCCTGGGCTGTCAGCACTTTGGCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp TCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGAAACATATGTGCTTGTaGCAAGACCCAAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SGASSLGLLSLRCRALSGKHMCL*QDPKGL
Trigger: GAGCCCTTTTGGGTCTTGGCACAAGCACATATGTTT...CCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp GAAGGAGGACTGCCTTCCGTGTGTGCTCCACTTGACCCTATGGGACCATCCATTGTCACAGGTGTCTCATaGAGTGGCACTCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: EGGLPSVCAPLDPMGPSIVTGVS*SGTLWC
Trigger: GCACCAGAGAGTGCCACTGCATGAGACACCTGTGAC...AATGGATGGTCCCATAGGGTCAAGTGGAGCACACACGGAAGGCAGTCCTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GGCACAGCTGTGGCTCTAGGGGGTCCAGCAGGGGAAATGCCAGAGGCCTGGTCACTTATCTGTCACCAGTaGAATTCCCATGTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GTAVALGGPAGEMPEAWSLICHQ*NSHVRS
Trigger: ACTTCTCACATGGGAATTGCACTGGTGACAGATAAG...TGACCAGGCCTCTGGCATTTCCCCTGCTGGACCCCCTAGAGCCACAGCTGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp CCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCCTGTGGAGGTCCTCTAATTaGTCAGGACACCTTGCATTT +
Preference number: 4 (lower is better)
Translates to: PTELPIAGPGASGVQASLWRSSN*SGHLAF
Trigger: AAATGCAAGGTGTCCTGAGCAATTAGAGGACCTCCA...CAGGGAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTGTCCCTTTCTGTGGATaGCAGGGACAGAGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: GVSCSGTLWCLISGVAVTVPFCG*QGQRKD
Trigger: GTCCTTTCTCTGTCCCTGGCATCCACAGAAAGGGAC...AGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTAGGGTGATCAGCAGCTaGAGAGAAGCAGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: GVSCSGTLWCLISGVAVTRVISS*REAAHE
Trigger: CTCATGAGCTGCTTCTCTGCAGCTGCTGATCACCCT...AGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp CTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTAGAGCACCAGAACTGTaGTATAGAAAAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LSGASSLGLLSLRCRALSRAPEL*YRKAGP
Trigger: TGGCCCAGCTTTTCTATACCACAGTTCTGGTGCTCT...ACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp CACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCCTGAACCCTCAGGGACAAAGTaGCTCAACTGGATCACAGTT +
Preference number: 4 (lower is better)
Translates to: HRTTHSWSRCLGCPGFPEPSGTK*LNWITV
Trigger: AACTGTGATCCAGTTGAGCCACTTTGTCCCTGAGGG...TTCAGGGAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp TCCACCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCCTGGGTACTGGCTCTaGGCAAGCAGATTTAAATAC +
Preference number: 4 (lower is better)
Translates to: STHRTTHSWSRCLGCPGFPGYWL*ASRFKY
Trigger: GTATTTAAATCTGCTTGCCCAGAGCCAGTACCCAGG...GAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp CAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATGGCTGCCTTTGCGGCTaGCTGTCTTTCAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QTSNGHRCLMQWHSLVPHGCLCG*LSFKRS
Trigger: GCTCCTCTTGAAAGACAGCCAGCCGCAAAGGCAGCC...ATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CAA 72 bp GCCTGTCACGAAGGAAGACAATGGGGCATGCCAACCTaGGTGGCATCAAAGCCACGTGGGCTTGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: ACHEGRQWGMPT*VASKPRGLARK
Trigger: TTTTCTGGCAAGCCCACGTGGCTTTGATGCCACCAAGGTTGGCATGCCCCATTGTCTTCCTTCGTGACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp GCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTGCCAACGATTTCCTTTaGCAGGAAGCGAAGAATAAA +
Preference number: 4 (lower is better)
Translates to: ASSLGLLSLRCRALSGALANDFL*QEAKNK
Trigger: TTTATTCTTCGCTTCCTGTCAAAGGAAATCGTTGGC...AAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp GCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTTCTCTGCAATCACCTTaGGCTTCACAAACATATGTG +
Preference number: 4 (lower is better)
Translates to: ASSLGLLSLRCRALSGALSLQSP*ASQTYV
Trigger: CACATATGTTTGTGAAGCTCAAGGTGATTGCAGAGA...AAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp CACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACCTAACTGAGTCCTaGGGAAATGGATCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: HRCLMQWHSLVPHLWGCCHLTES*GNGSAW
Trigger: CCAAGCTGATCCATTTCCTCAGGACTCAGTTAGGTG...ACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp CCGCTGCAGAGCCCTCAGTGGGGCTCTTACACAGAATGTGTTCCACCCACAGAACACCTAACTGAGTCCTaGGGAAATGGATCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PLQSPQWGSYTECVPPTEHLTES*GNGSAW
Trigger: CCAAGCTGATCCATTTCCTCAGGACTCAGTTAGGTG...TTCTGTGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp GGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCAGAACACTGCTCATaGTTTCACCTGCAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: GVSCSGTLWCLISGVAVTPEHCS*FHLQCA
Trigger: TGCACACTGCAGGTGAAATCATGAGCAGTGTTCTGG...AGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp AGCCACGTGGGCTTGCCAGAAAAGCCAATCTCAGAGCCCTCCTCCTGGGAGACACCAGTCTTGGTGTACTaGCAGGTCTTAATCCTTAGC +
Preference number: 4 (lower is better)
Translates to: SHVGLPEKPISEPSSWETPVLVY*QVLILS
Trigger: GCTAAGGATTAAGACCTGTCAGTACACCAAGACTGG...TGTCTCCCAGGAGGAGGGCTCTGAGATTGGCTTTTCTGGCAAGCCCACGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGAATGAGGATCATGCTTaGGTCTGGGGTCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PHFRLRMVTGVSCSGTLWNEDHA*VWGQVG
Trigger: GCCCACCTGACCCCAGACTCAAGCATGATCCTCATT...CCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CTGCAAGGTGCAGAACACCTGGGCTCACACTGTAGCCTGGAGTACCAGGCCCCCAGTTCAAGGCAACAGTaGGATCCAGTCTCTACAAAA +
Preference number: 4 (lower is better)
Translates to: LQGAEHLGSHCSLEYQAPSSRQQ*DPVSTK
Trigger: TTTTGTAGAGACTGGATCTCACTGTTGCCTTGAACT...GGGGGCCTGGTACTCCAGGCTACAGTGTGAGCCCAGGTGTTCTGCACCTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp CCCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGAACCGAAACAACACCTaGAGGAGGAGACCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PAFQTSNGHRCLMQWHSLNRNNT*RRRPEE
Trigger: CTCCTCCGGTCTCCTCCTGCAGGTGTTGTTTCGGTT...CAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp CCGCTGCAGAGCCCTCAGTGGGGCTCTTACACAGAATGTGTTCCACCCACAGAATACCGACAGGCTCTCTaGAATCACCTTGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PLQSPQWGSYTECVPPTEYRQAL*NHLELH
Trigger: GTGAAGCTCAAGGTGATTGCAGAGAGCCTGTCGGTA...TTCTGTGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp ATGTGTTCCACCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAATGAAGCAAAGGCTCTaGGTGATCCGAATGCCCATG +
Preference number: 4 (lower is better)
Translates to: MCSTHRTTHSWSRCLGCPMKQRL*VIRMPM
Trigger: CATGGGCATTCGGATCACGCAGAGCCTTTGCTTCAT...TGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGGTGGAACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp GGAAAACACGCAGCCACATGTACAACTCTCCCTAGATACAGGGAAGCAGGACACCTGGTGCCTCATCTCTaGGGTTGCTGTCACTCCGCT +
Preference number: 4 (lower is better)
Translates to: GKHAATCTTLPRYREAGHLVPHL*GCCHSA
Trigger: AGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAG...GTGTCCTGCTTCCCTGTATCTAGGGAGAGTTGTACATGTGGCTGCGTGTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp AGCCACGTGGGCTTGCCAGAAAAGCCAATCTCAGAGCCCTCCTCCTGGGAGACAACTGAGGCCATGCTTTaGAGGTCCTCTAATTGCTCA +
Preference number: 4 (lower is better)
Translates to: SHVGLPEKPISEPSSWETTEAML*RSSNCS
Trigger: TGAGCAATTAGAGGACCTCCAAAGCATGGCCTCAGT...TGTCTCCCAGGAGGAGGGCTCTGAGATTGGCTTTTCTGGCAAGCCCACGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CCGCTGCAGAGCCCTCAGTGGGGCTCTTACACAGAATGTGTTCCACCCACAGAATTTCCATGTGGTGCATaGGAGAGAGAGGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PLQSPQWGSYTECVPPTEFPCGA*EREVSL
Trigger: GAGAGAAACCTCTCTCTCTCATGCACCACATGGAAA...TTCTGTGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp TCCACCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCTGGGAAATGTGATCTaGAAACCTTCCTGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: STHRTTHSWSRCLGCPGFLGNVI*KPSWFH
Trigger: ATGAAACCAGGAAGGTTTTCAGATCACATTTCCCAG...GAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp GTACCAGGCCCCCATGCCTGCCACTCTTGTCCTGGGGCTGGAATTTGGTTGTATTGGGAAGCCATGTTCTaGCTTGCAATCCAGGTGATT +
Preference number: 4 (lower is better)
Translates to: VPGPHACHSCPGAGIWLYWEAMF*LAIQVI
Trigger: AATCACCTGGATTGCAAGTCAGAACATGGCTTCCCA...ATACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAGGCATGGGGGCCTGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GTACCAGGCCCCCATGCCTGCCACTCTTGTCCTGGGGCTGGAATTTGGTTGTATCAGCACCACTCCAGTTaGATAGTGAGGGACAACATT +
Preference number: 4 (lower is better)
Translates to: VPGPHACHSCPGAGIWLYQHHSS*IVRDNI
Trigger: AATGTTGTCCCTCACTATGCAACTGGAGTGGTGCTG...ATACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAGGCATGGGGGCCTGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp GGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCTTCACAAACATATGTaGTTGTGCCAAGACCCAAAA +
Preference number: 4 (lower is better)
Translates to: GTLWCLISGVAVTPLQSPLHKHM*LCQDPK
Trigger: TTTTGGGTCTTGGCACAAGCACATATGTTTGTGAAG...AGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp CCGCTGCAGAGCCCTCAGTGGGGCTCTTACACAGAATGTGTTCCACCCACAGAAAGCCATGTTCTGACTTaGAATCCAGGTGATTCCGAG +
Preference number: 4 (lower is better)
Translates to: PLQSPQWGSYTECVPPTESHVLT*NPGDSE
Trigger: CTCGGAATCACCTGGATTGCAAGTCAGAACATGGCT...TTCTGTGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp GCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTCTTTCCTCTATTGGCTaGAAAATTAATCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: ASSLGLLSLRCRALSGALLSSIG*KINLAT
Trigger: TGTGGCCAGATTAATTTTCCAGCCAATAGAGGAAAG...AAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp GTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTTTCCTCTATTGGCTaGAAAATTAATCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VALSGASSLGLLSLRCRALSSIG*KINLAT
Trigger: TGTGGCCAGATTAATTTTCCAGCCAATAGAGGAAAG...GGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp CCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGCTGCAGAGCCCTCAGTaGGGCTCTTACACAGAATGT +
Preference number: 4 (lower is better)
Translates to: PHFRLRMVTGVSCSGTLWLQSPQ*GSYTEC
Trigger: ACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAG...CCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp TTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGAGGTGTCTCATGCAGTaGCACTCTCTGGTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: FEWSQVSHAVALSGASSLRCLMQ*HSLVPH
Trigger: ATGAGGCACCAGAGAGTGCCACTGCATGAGACACCT...CAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp TCAGACCACAGTTTTGACACAAAGAAAGCCACAACTTCAGGGCCACACTCTGTTCAGACCCTGAAGGCCTaGAGTGGGTCCTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SDHSFDTKKATTSGPHSVQTLKA*SGSWEA
Trigger: GGCTTCCCAGGACCCACTCCAGGCCTTCAGGGTCTG...AACAGAGTGTGGCCCTGAAGTTGTGGCTTTCTTTGTGTCAAAACTGTGGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp GTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCATTCAAGACAAAGGTaGTCAACCGAAACAACACCT +
Preference number: 4 (lower is better)
Translates to: VSCSGTLWCLISGVAVTPHSRQR*STETTP
Trigger: AGGTGTTGTTTCGGTTGATCACCTTTGTCTTGAATG...CGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp CACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCCTGAAGCCAACGATTTCCTTTaGCAGGAAGCGAAGAATAAA +
Preference number: 4 (lower is better)
Translates to: HRTTHSWSRCLGCPGFPEANDFL*QEAKNK
Trigger: TTTATTCTTCGCTTCCTGTCAAAGGAAATCGTTGGC...TTCAGGGAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp GTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGTCTCTGCAATCACCTTaGGCTTCACAAACATATGTG +
Preference number: 4 (lower is better)
Translates to: VSCSGTLWCLISGVAVTPSLQSP*ASQTYV
Trigger: CACATATGTTTGTGAAGCTCAAGGTGATTGCAGAGA...CGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp ACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCTCATGGCAGCAAATGTaGAACACTCTGTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: TGVSCSGTLWCLISGVAVSWQQM*NTLSLH
Trigger: ATGGAGTGACAGAGTGTTTCACATTTGCTGCCATGA...GACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp TCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGAGTGCAATTCCCATGTaGGAAGTTACAGAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SQVSHAVALSGASSLGLLSAIPM*EVTESC
Trigger: GCAGCTTTCTGTAACTTCTCACATGGGAATTGCACT...CAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR GCA 90 bp CCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGGAAGACAATGGGGCATaGCAACCTTGGTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: PHFRLRMVTGVSCSGTLWEDNGA*QPWWHQ
Trigger: TTGATGCCACCAAGGTTGGCATGCCCCATTGTCTTC...CCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp GAAGGAGGACTGCCTTCCGTGTGTGCTCCACTTGACCCTATGGGACCATCCATTAGAGCACCAGAACTGTaGTATAGAAAAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: EGGLPSVCAPLDPMGPSIRAPEL*YRKAGP
Trigger: TGGCCCAGCTTTTCTATACCACAGTTCTGGTGCTCT...AATGGATGGTCCCATAGGGTCAAGTGGAGCACACACGGAAGGCAGTCCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp GGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCATTCAAGACAAAGGTaGTCAACCGAAACAACACCT +
Preference number: 4 (lower is better)
Translates to: GVSCSGTLWCLISGVAVTHSRQR*STETTP
Trigger: AGGTGTTGTTTCGGTTGATCACCTTTGTCTTGAATG...AGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp CAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGATATCATACACACCCTaGTCACCAAAGTTCAATACA +
Preference number: 4 (lower is better)
Translates to: QWHSLVPHLWGCCHSAAEISYTP*SPKFNT
Trigger: TGTATTGAACTTTGGTGATCAGGGTGTGTATGATAT...CTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp CCCCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTCAGCACCACTCCAGTTaGATAGTGAGGGACAACATT +
Preference number: 4 (lower is better)
Translates to: PRISDFEWSQVSHAVALSQHHSS*IVRDNI
Trigger: AATGTTGTCCCTCACTATGCAACTGGAGTGGTGCTG...AGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp CCCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGTCATGGCAGCAAATGTaGAACACTCTGTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: PAFQTSNGHRCLMQWHSLSWQQM*NTLSLH
Trigger: ATGGAGTGACAGAGTGTTTCACATTTGCTGCCATGA...CAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR GCA 90 bp AGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACCTTCACAAACATATGTaGTTGTGCCAAGACCCAAAA +
Preference number: 4 (lower is better)
Translates to: RCLMQWHSLVPHLWGCCHLHKHM*LCQDPK
Trigger: TTTTGGGTCTTGGCACAAGCACATATGTTTGTGAAG...GTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp TTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGAAGAGTTTGAAGCTTaGTTGATTCTGGGGAACCCA +
Preference number: 4 (lower is better)
Translates to: FEWSQVSHAVALSGASSLEEFEA*LILGNP
Trigger: TGGGTTCCCCAGAATCAACCAAGCTTCAAACTCTTC...CAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CCA 90 bp GCCCTTACTGGCCCTCTCTCTAGGTGTAGACACAGAAGGTTTGGGGCACTGAGTATTTCAGACTTCGAATaGTCACAGGTGTCTCATGCA +
Preference number: 4 (lower is better)
Translates to: ALTGPLSRCRHRRFGALSISDFE*SQVSHA
Trigger: TGCATGAGACACCTGTGACCATTCGAAGTCTGAAAT...ACTCAGTGCCCCAAACCTTCTGTGTCTACACCTAGAGAGAGGGCCAGTAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp GGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTAGAGACTTGTTTCCATaGAGAAGTAGCCTCACTATA +
Preference number: 4 (lower is better)
Translates to: GVSCSGTLWCLISGVAVTRDLFP*RSSLTI
Trigger: TATAGTGAGGCTACTTCTCCATGGAAACAAGTCTCT...AGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CAA 72 bp CTGCCACTCTTGTCCTGGGGCTGGAATTTGGTTGTATaGATCAATGCTGGAATTAATGGGTCAACGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPLLSWGWNLVV*INAGINGSTGG
Trigger: CCCTCCCGTTGACCCATTAATTCCAGCATTGATCAATACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CAA 72 bp CCCCCATGCCTGCCACTCTTGTCCTGGGGCTGGAATTaGGTTGTATTGATCAATGCTGGAATTAATGGGTCA +
Preference number: 4 (lower is better)
Translates to: PPCLPLLSWGWN*VVLINAGINGS
Trigger: TGACCCATTAATTCCAGCATTGATCAATACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAGGCATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CTAAAAACTCAGACCACAGTTTTGACACAAAGAAAGCCACAACTTCAGGGCCACTGCCCGATGAAGGCATaGCTGAGGCCATGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LKTQTTVLTQRKPQLQGHCPMKA*LRPCFG
Trigger: TCCAAAGCATGGCCTCAGTCATGCCTTCATCGGGCA...GTGGCCCTGAAGTTGTGGCTTTCTTTGTGTCAAAACTGTGGTCTGAGTTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp CAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATATTTCAGACTTCGAATaGTCACAGGTGTCTCATGCA +
Preference number: 4 (lower is better)
Translates to: QTSNGHRCLMQWHSLVPHISDFE*SQVSHA
Trigger: TGCATGAGACACCTGTGACCATTCGAAGTCTGAAAT...ATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR TCA 90 bp TCAGACCACAGTTTTGACACAAAGAAAGCCACAACTTCAGGGCCACACTCTGTTTCAACGGGAGGGACCTaGCTCAGTAATACTAGCCAT +
Preference number: 4 (lower is better)
Translates to: SDHSFDTKKATTSGPHSVSTGGT*LSNTSH
Trigger: ATGGCTAGTATTACTGAGTCAGGTCCCTCCCGTTGA...AACAGAGTGTGGCCCTGAAGTTGTGGCTTTCTTTGTGTCAAAACTGTGGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CCA 90 bp TCAGACCACAGTTTTGACACAAAGAAAGCCACAACTTCAGGGCCACACTCTGTTTGGCCAGGAAGAGGGTaGTTGAGTAAAGCAGCGTTA +
Preference number: 4 (lower is better)
Translates to: SDHSFDTKKATTSGPHSVWPGRG*LSKAAL
Trigger: TAACGCTGCTTTACTCAACCACCCTCTTCCTGGCCA...AACAGAGTGTGGCCCTGAAGTTGTGGCTTTCTTTGTGTCAAAACTGTGGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CTCAGAGACTTGTTTCCATGGAGAAGTAGCCTCACTATAAGTGGTATTGAAAGCGCAGCTCATGAGGACTaGAGGTCCCTTTCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LRDLFPWRSSLTISGIESAAHED*RSLSVD
Trigger: ATCCACAGAAAGGGACCTTCAGTCCTCATGAGCTGC...GCTTTCAATACCACTTATAGTGAGGCTACTTCTCCATGGAAACAAGTCTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
3UTR CAA 72 bp CCATGCTTTGGAGGTCCTCTAATTGCTCAGGACACCTaGCATTTAGCTGCTTTTCTCCCACTTAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PCFGGPLIAQDT*HLAAFLPLSAK
Trigger: CTTTGCACTAAGTGGGAGAAAAGCAGCTAAATGCAAGGTGTCCTGAGCAATTAGAGGACCTCCAAAGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CTCAGAGACTTGTTTCCATGGAGAAGTAGCCTCACTATAAGTGGTATTGAAAGCACCCCAAGCCAAATCTaGAGTGACCAACAGTTACCT +
Preference number: 4 (lower is better)
Translates to: LRDLFPWRSSLTISGIESTPSQI*SDQQLP
Trigger: AGGTAACTGTTGGTCACTTCAGATTTGGCTTGGGGT...GCTTTCAATACCACTTATAGTGAGGCTACTTCTCCATGGAAACAAGTCTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CTCAGAGACTTGTTTCCATGGAGAAGTAGCCTCACTATAAGTGGTATTGAAAGCTCACTCTGGGAAATGTaGTCTGAAAACCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LRDLFPWRSSLTISGIESSLWEM*SENLPG
Trigger: ACCAGGAAGGTTTTCAGATCACATTTCCCAGAGTGA...GCTTTCAATACCACTTATAGTGAGGCTACTTCTCCATGGAAACAAGTCTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp CTAAAAACTCAGACCACAGTTTTGACACAAAGAAAGCCACAACTTCAGGGCCACAAAGCATTCTCCCTCTaGGTAGATAAAAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: LKTQTTVLTQRKPQLQGHKAFSL*VDKNLP
Trigger: TGGCAGGTTTTTATCTACTCAGAGGGAGAATGCTTT...GTGGCCCTGAAGTTGTGGCTTTCTTTGTGTCAAAACTGTGGTCTGAGTTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR TCA 90 bp TCAGACCACAGTTTTGACACAAAGAAAGCCACAACTTCAGGGCCACACTCTGTTATATCATACACACCCTaGTCACCAAAGTTCAATACA +
Preference number: 4 (lower is better)
Translates to: SDHSFDTKKATTSGPHSVISYTP*SPKFNT
Trigger: TGTATTGAACTTTGGTGATCAGGGTGTGTATGATAT...AACAGAGTGTGGCCCTGAAGTTGTGGCTTTCTTTGTGTCAAAACTGTGGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS CCA 90 bp AGGAGACCGGAGGAGGCCAGCCGGGCCGCGTGGCCCAGCACCTCCTaGCTGCCCATAGCCTCCGCGCCAGGCTCAGACACCAGGAAATGC +
Preference number: 5 (lower is better)
Translates to: RRPEEASRAAWPSTS*LPIASAPGSDTRKC
Trigger: GCATTTCCTGGTGTCTGAGCCTGGCGCGGAGGCTATGGGCAGCCAGGAGGTGCTGGGCCACGCGGCCCGGCTGGCCTCCTCCGGTCTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS GCA 90 bp GGTCAGGCCGGCCAGCAGGGCCAGCTTGAGCAGGGACTCCAAGACTaGAGCAGCCACAGCAACGTCCTCCTGCTTCTGAAGTGTGGCATC +
Preference number: 5 (lower is better)
Translates to: GQAGQQGQLEQGLQD*SSHSNVLLLLKCGI
Trigger: GATGCCACACTTCAGAAGCAGGAGGACGTTGCTGTGGCTGCTGCAGTCTTGGAGTCCCTGCTCAAGCTGGCCCTGCTGGCCGGCCTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296292.8
ENST00000394738.7
ENST00000471158.1
CDS-3UTR CAA 90 bp TGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCATGCTGTCCCGAGAGTaGCTCCCAGACAGAAGGCCC +
Preference number: 5 (lower is better)
Translates to: WHSLVPHLWGCCHSAAEPMLSRE*LPDRRP
Trigger: GGGCCTTCTGTCTGGGAGCAACTCTCGGGACAGCAT...GGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp GCAGGCTGCAAGGTGCAGAACACCTGGGCTCACACTGTAGCCTGGAGTACCAGGAGCCCTGGGCTGCCTTaGCGGCTGGCTGTCTTTCAA +
Preference number: 5 (lower is better)
Translates to: AGCKVQNTWAHTVAWSTRSPGLP*RLAVFQ
Trigger: TTGAAAGACAGCCAGCCGCAAAGGCAGCCCAGGGCT...CCTGGTACTCCAGGCTACAGTGTGAGCCCAGGTGTTCTGCACCTTGCAGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp GTACCAGGCCCCCATGCCTGCCACTCTTGTCCTGGGGCTGGAATTTGGTTGTATGCCAGCAGGGCCAGCTaGAGCAGGGACTCCAAGACT +
Preference number: 5 (lower is better)
Translates to: VPGPHACHSCPGAGIWLYASRAS*SRDSKT
Trigger: AGTCTTGGAGTCCCTGCTCAAGCTGGCCCTGCTGGC...ATACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAGGCATGGGGGCCTGGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp CTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTCCGTGTGTGCTCCACTaGACCCTATGGGACCATCCA +
Preference number: 5 (lower is better)
Translates to: LSGASSLGLLSLRCRALSPCVLH*TLWDHP
Trigger: TGGATGGTCCCATAGGGTCAAGTGGAGCACACACGG...ACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp CTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTACTGGGGCATGCCAACCTaGGTGGCATCAAAGCCACGT +
Preference number: 5 (lower is better)
Translates to: LISGVAVTPLQSPQWGSYWGMPT*VASKPR
Trigger: ACGTGGCTTTGATGCCACCAAGGTTGGCATGCCCCA...GTAAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp AGCCACGTGGGCTTGCCAGAAAAGCCAATCTCAGAGCCCTCCTCCTGGGAGACAGTTAGCCACAGCAGGTaGAGGGTCTGGCTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: SHVGLPEKPISEPSSWETVSHSR*RVWLQS
Trigger: AGACTGGAGCCAGACCCTCAACCTGCTGTGGCTAAC...TGTCTCCCAGGAGGAGGGCTCTGAGATTGGCTTTTCTGGCAAGCCCACGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp AGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACGCCTCATCTCTGGGGTaGCTGTCACTCCGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: RCLMQWHSLVPHLWGCCHASSLG*LSLRCR
Trigger: TCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGC...GTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp GGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTTTCAAAGTCCGCCTCTaGCAGGTGGCCAGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: GVSCSGTLWCLISGVAVTFKVRL*QVARPG
Trigger: TCCTGGCCTGGCCACCTGCAAGAGGCGGACTTTGAA...AGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp CCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGGCCAGCAGGGCCAGCTaGAGCAGGGACTCCAAGACT +
Preference number: 5 (lower is better)
Translates to: PHFRLRMVTGVSCSGTLWASRAS*SRDSKT
Trigger: AGTCTTGGAGTCCCTGCTCAAGCTGGCCCTGCTGGC...CCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp GAAGGAGGACTGCCTTCCGTGTGTGCTCCACTTGACCCTATGGGACCATCCATTATGCTGTCCCGAGAGTaGCTCCCAGACAGAAGGCCC +
Preference number: 5 (lower is better)
Translates to: EGGLPSVCAPLDPMGPSIMLSRE*LPDRRP
Trigger: GGGCCTTCTGTCTGGGAGCAACTCTCGGGACAGCAT...AATGGATGGTCCCATAGGGTCAAGTGGAGCACACACGGAAGGCAGTCCTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp GCCCTTACTGGCCCTCTCTCTAGGTGTAGACACAGAAGGTTTGGGGCACTGAGTGCCTCATCTCTGGGGTaGCTGTCACTCCGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ALTGPLSRCRHRRFGALSASSLG*LSLRCR
Trigger: TCTGCAGCGGAGTGACAGCAACCCCAGAGATGAGGC...ACTCAGTGCCCCAAACCTTCTGTGTCTACACCTAGAGAGAGGGCCAGTAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS GCA 90 bp GAAATGGATCAGCTTGGTCTCTGTGAGGAATGCTGTCCCGAGAGTTaGTCCCAGACAGAAGGCCCCCACAGCAATGTGTGCCAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: EMDQLGLCEECCPES*SQTEGPHSNVCQSG
Trigger: GCCAGACTGGCACACATTGCTGTGGGGGCCTTCTGTCTGGGAGCAACTCTCGGGACAGCATTCCTCACAGAGACCAAGCTGATCCATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp CCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCCTGCACAAACATATGTGCTaGTGCCAAGACCCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: PTELPIAGPGASGVQASLHKHMC*CQDPKG
Trigger: CCCTTTTGGGTCTTGGCACAAGCACATATGTTTGTG...CAGGGAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp CCCACAGAACTACCCATAGCTGGTCCAGGTGCCTCGGGTGTCCAGGCTTCCCTGGAGTTTGAAGCTTGGTaGATTCTGGGGAACCCAGTA +
Preference number: 5 (lower is better)
Translates to: PTELPIAGPGASGVQASLEFEAW*ILGNPV
Trigger: TACTGGGTTCCCCAGAATCAACCAAGCTTCAAACTC...CAGGGAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp CTCATCTCTGGGGTTGCTGTCACTCCGCTGCAGAGCCCTCAGTGGGGCTCTTACGCCAGCATCACAAAATaGTACCTGTCGACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LISGVAVTPLQSPQWGSYASITK*YLSTSS
Trigger: AGAGGAGGTCGACAGGTACAATTTTGTGATGCTGGC...GTAAGAGCCCCACTGAGGGCTCTGCAGCGGAGTGACAGCAACCCCAGAGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp GCAGGCTGCAAGGTGCAGAACACCTGGGCTCACACTGTAGCCTGGAGTACCAGGTTGTGCCTCAGAGACTaGTTTCCATGGAGAAGTAGC +
Preference number: 5 (lower is better)
Translates to: AGCKVQNTWAHTVAWSTRLCLRD*FPWRSS
Trigger: GCTACTTCTCCATGGAAACAAGTCTCTGAGGCACAA...CCTGGTACTCCAGGCTACAGTGTGAGCCCAGGTGTTCTGCACCTTGCAGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp CCCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGAAGGAGGGGCCCTGCTaGAATCAGGTTGGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: PAFQTSNGHRCLMQWHSLKEGPC*NQVGKW
Trigger: CCACTTCCCAACCTGATTCAAGCAGGGCCCCTCCTT...CAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp GTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCACTCCGCACAAACATATGTGCTaGTGCCAAGACCCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: VSCSGTLWCLISGVAVTPHKHMC*CQDPKG
Trigger: CCCTTTTGGGTCTTGGCACAAGCACATATGTTTGTG...CGGAGTGACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp TGCTCCCAGAGACCCCGGAGTCACAAGGCTGCTTGTAGAGCAGCAGCTCTGTTCGAGTTTGAAGCTTGGTaGATTCTGGGGAACCCAGTA +
Preference number: 5 (lower is better)
Translates to: CSQRPRSHKAACRAAALFEFEAW*ILGNPV
Trigger: TACTGGGTTCCCCAGAATCAACCAAGCTTCAAACTC...GAACAGAGCTGCTGCTCTACAAGCAGCCTTGTGACTCCGGGGTCTCTGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp CCGCTGCAGAGCCCTCAGTGGGGCTCTTACACAGAATGTGTTCCACCCACAGAACACTCTGTCACTCCATaGATGGCAAGCAGGAGAACA +
Preference number: 5 (lower is better)
Translates to: PLQSPQWGSYTECVPPTEHSVTP*MASRRT
Trigger: TGTTCTCCTGCTTGCCATCAATGGAGTGACAGAGTG...TTCTGTGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp CCCGCATTTCAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGCTCCCCAAATCCACTaGGGTAAAGTGAGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: PAFQTSNGHRCLMQWHSLAPQIH*GKVRQA
Trigger: AGCCTGCCTCACTTTACCCAAGTGGATTTGGGGAGC...CAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTGAAATGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS GCA 90 bp CACAGAATGTGTTCCACCCACAGAACTACCCATAGCTGGTCCAGGTaGCTCGGGTGTCCAGGCTTCCCTGAAGTCATGTCATTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: HRMCSTHRTTHSWSR*LGCPGFPEVMSFCQ
Trigger: CTGACAAAATGACATGACTTCAGGGAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGGTGGAACACATTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp CAGACTTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCCCATGTTAAAGCAGTaGGCCAAGATGAAGCCCACG +
Preference number: 5 (lower is better)
Translates to: QTSNGHRCLMQWHSLVPHPMLKQ*AKMKPT
Trigger: CGTGGGCTTCATCTTGGCCAACTGCTTTAACATGGG...ATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp TTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGCCCATGTTAAAGCAGTaGGCCAAGATGAAGCCCACG +
Preference number: 5 (lower is better)
Translates to: FEWSQVSHAVALSGASSLPMLKQ*AKMKPT
Trigger: CGTGGGCTTCATCTTGGCCAACTGCTTTAACATGGG...CAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp TCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGAGGAAATGGATCAGCTaGGTCTCTGTGAGGAATGCT +
Preference number: 5 (lower is better)
Translates to: SQVSHAVALSGASSLGLLRKWIS*VSVRNA
Trigger: AGCATTCCTCACAGAGACCAAGCTGATCCATTTCCT...CAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp GGCACAGCTGTGGCTCTAGGGGGTCCAGCAGGGGAAATGCCAGAGGCCTGGTCATTAAGATATAGTTTGTaGGAGCATGTAGCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: GTAVALGGPAGEMPEAWSLRYSL*EHVAPK
Trigger: CTTTGGAGCTACATGCTCCAACAAACTATATCTTAA...TGACCAGGCCTCTGGCATTTCCCCTGCTGGACCCCCTAGAGCCACAGCTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp GTACCAGGCCCCCATGCCTGCCACTCTTGTCCTGGGGCTGGAATTTGGTTGTATTCCTGGGGCTGGAATTaGGTTGTATTGATCAATGCT +
Preference number: 5 (lower is better)
Translates to: VPGPHACHSCPGAGIWLYSWGWN*VVLINA
Trigger: AGCATTGATCAATACAACCAAATTCCAGCCCCAGGA...ATACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAGGCATGGGGGCCTGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp ACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGGGGTTGCTGTCATTGCTCAGGACACCTaGCATTTAGCTGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: TGVSCSGTLWCLISGVAVIAQDT*HLAAFL
Trigger: GAGAAAAGCAGCTAAATGCAAGGTGTCCTGAGCAAT...GACAGCAACCCCAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp CCGCTGCAGAGCCCTCAGTGGGGCTCTTACACAGAATGTGTTCCACCCACAGAACTCTCTGCAATCACCTaGAGCTTCACAAACATATGT +
Preference number: 5 (lower is better)
Translates to: PLQSPQWGSYTECVPPTELSAIT*SFTNIC
Trigger: ACATATGTTTGTGAAGCTCAAGGTGATTGCAGAGAG...TTCTGTGGGTGGAACACATTCTGTGTAAGAGCCCCACTGAGGGCTCTGCAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp TTCGAATGGTCACAGGTGTCTCATGCAGTGGCACTCTCTGGTGCCTCATCTCTGAGGAAATGGATCAGCTaGGTCTCTGTGAGGAATGCT +
Preference number: 5 (lower is better)
Translates to: FEWSQVSHAVALSGASSLRKWIS*VSVRNA
Trigger: AGCATTCCTCACAGAGACCAAGCTGATCCATTTCCT...CAGAGATGAGGCACCAGAGAGTGCCACTGCATGAGACACCTGTGACCATTCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS-3UTR CAA 90 bp TCAGGGACAAAGTGGCTCAACTGGATCACAGTTTTCTTCAAAGTCCGCCTCTTGCACTCTGTCACTCCATaGATGGCAAGCAGGAGAACA +
Preference number: 5 (lower is better)
Translates to: SGTKWLNWITVFFKVRLLHSVTP*MASRRT
Trigger: TGTTCTCCTGCTTGCCATCAATGGAGTGACAGAGTG...CAAGAGGCGGACTTTGAAGAAAACTGTGATCCAGTTGAGCCACTTTGTCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp CTAAAAACTCAGACCACAGTTTTGACACAAAGAAAGCCACAACTTCAGGGCCACCCAGGAAGAGGGTGGTaGAGTAAAGCAGCGTTAGTC +
Preference number: 5 (lower is better)
Translates to: LKTQTTVLTQRKPQLQGHPGRGW*SKAALV
Trigger: GACTAACGCTGCTTTACTCAACCACCCTCTTCCTGG...GTGGCCCTGAAGTTGTGGCTTTCTTTGTGTCAAAACTGTGGTCTGAGTTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS-3UTR CAA 90 bp GCCCTTACTGGCCCTCTCTCTAGGTGTAGACACAGAAGGTTTGGGGCACTGAGTCAATTAAGATATAGTTaGTTGGAGCATGTAGCTCCA +
Preference number: 5 (lower is better)
Translates to: ALTGPLSRCRHRRFGALSQLRYS*LEHVAP
Trigger: TGGAGCTACATGCTCCAACAAACTATATCTTAATTG...ACTCAGTGCCCCAAACCTTCTGTGTCTACACCTAGAGAGAGGGCCAGTAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296292.8
CDS TCA 90 bp CACACCCAGGGGGACTCTTACATTTACTACGCCAACGATTTCCTTTaGCAGGAAGCGAAGAATAAATGCATTCAAGACAAAGGTGATCAA +
Preference number: 5 (lower is better)
Translates to: HTQGDSYIYYANDFL*QEAKNKCIQDKGDQ
Trigger: TTGATCACCTTTGTCTTGAATGCATTTATTCTTCGCTTCCTGTCAAAGGAAATCGTTGGCGTAGTAAATGTAAGAGTCCCCCTGGGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394738.7
CDS CCA 72 bp GAGGAGGCCAGCCGGGCCGCGTGGCCCAGCACCTCCTaGCTGCCCATAGCCTCCGCGCCAGGCTCAGACACC +
Preference number: 6 (lower is better)
Translates to: EEASRAAWPSTS*LPIASAPGSDT
Trigger: GGTGTCTGAGCCTGGCGCGGAGGCTATGGGCAGCCAGGAGGTGCTGGGCCACGCGGCCCGGCTGGCCTCCTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS GCA 72 bp CAGCTTGGTCTCTGTGAGGAATGCTGTCCCGAGAGTTaGTCCCAGACAGAAGGCCCCCACAGCAATGTGTGC +
Preference number: 6 (lower is better)
Translates to: QLGLCEECCPES*SQTEGPHSNVC
Trigger: GCACACATTGCTGTGGGGGCCTTCTGTCTGGGAGCAACTCTCGGGACAGCATTCCTCACAGAGACCAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS GCA 72 bp CCTGAGGAAATGGATCAGCTTGGTCTCTGTGAGGAATaGTGTCCCGAGAGTTGCTCCCAGACAGAAGGCCCC +
Preference number: 6 (lower is better)
Translates to: PEEMDQLGLCEE*CPESCSQTEGP
Trigger: GGGGCCTTCTGTCTGGGAGCAACTCTCGGGACAGCATTCCTCACAGAGACCAAGCTGATCCATTTCCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS GCA 72 bp TGTTCCACCCACAGAACTACCCATAGCTGGTCCAGGTaGCTCGGGTGTCCAGGCTTCCCTGAAGTCATGTCA +
Preference number: 6 (lower is better)
Translates to: CSTHRTTHSWSR*LGCPGFPEVMS
Trigger: TGACATGACTTCAGGGAAGCCTGGACACCCGAGGCACCTGGACCAGCTATGGGTAGTTCTGTGGGTGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS CAA 72 bp AGGCTCTGCGTGATCCGAATGCCCATGTTAAAGCAGTaGGCCAAGATGAAGCCCACGCTGCCACACCAACGG +
Preference number: 6 (lower is better)
Translates to: RLCVIRMPMLKQ*AKMKPTLPHQR
Trigger: CCGTTGGTGTGGCAGCGTGGGCTTCATCTTGGCCAACTGCTTTAACATGGGCATTCGGATCACGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS CAA 72 bp GCTGATTGTCCTGGCGCCAACGCCCCTGCCTATACCTaGAGTGTGTGTCTGGAGTTGAACGAGGGGAACAGT +
Preference number: 6 (lower is better)
Translates to: ADCPGANAPAYT*SVCLELNEGNS
Trigger: ACTGTTCCCCTCGTTCAACTCCAGACACACACTCAAGGTATAGGCAGGGGCGTTGGCGCCAGGACAATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471158.1
CDS CAA 90 bp ATGAAGCAAAGGCTCTGCGTGATCCGAATGCCCATGTTAAAGCAGTaGGCCAAGATGAAGCCCACGCTGCCACACCAACGGGTCAAGAGA +
Preference number: 6 (lower is better)
Translates to: MKQRLCVIRMPMLKQ*AKMKPTLPHQRVKR
Trigger: TCTCTTGACCCGTTGGTGTGGCAGCGTGGGCTTCATCTTGGCCAACTGCTTTAACATGGGCATTCGGATCACGCAGAGCCTTTGCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS TCA 72 bp CATGTCATTTTGTCAGTGCGTCTGGGCACACCTAACTaGGTCCTGAGGAAATGGATCAGCTTGGTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: HVILSVRLGTPN*VLRKWISLVSV
Trigger: CACAGAGACCAAGCTGATCCATTTCCTCAGGACTCAGTTAGGTGTGCCCAGACGCACTGACAAAATGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296292.8
ENST00000394738.7
CDS TCA 72 bp GGGGACTCTTACATTTACTACGCCAACGATTTCCTTTaGCAGGAAGCGAAGAATAAATGCATTCAAGACAAA +
Preference number: 6 (lower is better)
Translates to: GDSYIYYANDFL*QEAKNKCIQDK
Trigger: TTTGTCTTGAATGCATTTATTCTTCGCTTCCTGTCAAAGGAAATCGTTGGCGTAGTAAATGTAAGAGTCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394738.7
CDS CAA 72 bp TCTTTCCAGTTTATAAACGCTCCATTTCTTGTAATATaGGGTAACAGATCTGTTATTCTGGAGACAGGAAGA +
Preference number: 6 (lower is better)
Translates to: SFQFINAPFLVI*GNRSVILETGR
Trigger: TCTTCCTGTCTCCAGAATAACAGATCTGTTACCCAATATTACAAGAAATGGAGCGTTTATAAACTGGAAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296292.8
ENST00000394738.7
ENST00000471158.1