RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RFLNB (Homo sapiens)

Ensembl gene IDs: ENSG00000183688

Ensembl transcript IDs: ENST00000329099.4, ENST00000640199.1

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCTCTCCAGGACTCCAGCGACTGCGCACGACGGCGATTGTCGCTaGACCTGCTGCTGTGGCTCCGGGGCACCGCGGGGCTCAGTTCAG +
Preference number: 1 (lower is better)
Translates to: WLSRTPATAHDGDCR*TCCCGSGAPRGSVQ
Trigger: CTGAACTGAGCCCCGCGGTGCCCCGGAGCCACAGCAGCAGGTGCAGCGACAATCGCCGTCGTGCGCAGTCGCTGGAGTCCTGGAGAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 90 bp GTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTaGAGGCCCCGTCCACAGGGCGTCGATGCATTGGGGCACAGCGGA +
Preference number: 1 (lower is better)
Translates to: VPAELQPGKLRPRVD*RPRPQGVDALGHSG
Trigger: TCCGCTGTGCCCCAATGCATCGACGCCCTGTGGACGGGGCCTGCAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CCA 90 bp TCCAGCGACTGCGCACGACGGCGATTGTCGCTGCACCTGCTGCTGTaGCTCCGGGGCACCGCGGGGCTCAGTTCAGCTTTCGGCGCAGAT +
Preference number: 1 (lower is better)
Translates to: SSDCARRRLSLHLLL*LRGTAGLSSAFGAD
Trigger: ATCTGCGCCGAAAGCTGAACTGAGCCCCGCGGTGCCCCGGAGCCACAGCAGCAGGTGCAGCGACAATCGCCGTCGTGCGCAGTCGCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 90 bp TGGCGGGAGGCAGGTCTGAAGCCACCGCACCCTGGTCCACCCCGCTaGTGGGCCACGCCAGCCGAATTCACACGGTCCTTGGGGACATTT +
Preference number: 1 (lower is better)
Translates to: WREAGLKPPHPGPPR*WATPAEFTRSLGTF
Trigger: AAATGTCCCCAAGGACCGTGTGAATTCGGCTGGCGTGGCCCAGCAGCGGGGTGGACCAGGGTGCGGTGGCTTCAGACCTGCCTCCCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CCA 90 bp CGGGAGGCAGGTCTGAAGCCACCGCACCCTGGTCCACCCCGCTGCTaGGCCACGCCAGCCGAATTCACACGGTCCTTGGGGACATTTCAG +
Preference number: 1 (lower is better)
Translates to: REAGLKPPHPGPPRC*ATPAEFTRSLGTFQ
Trigger: CTGAAATGTCCCCAAGGACCGTGTGAATTCGGCTGGCGTGGCCCAGCAGCGGGGTGGACCAGGGTGCGGTGGCTTCAGACCTGCCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CCA 90 bp GTGGCTCCGGGGCACCGCGGGGCTCAGTTCAGCTTTCGGCGCAGATaGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGAGCTT +
Preference number: 1 (lower is better)
Translates to: VAPGHRGAQFSFRRR*RPSAETRSYSRAEL
Trigger: AAGCTCAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGCTGAACTGAGCCCCGCGGTGCCCCGGAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 90 bp CTGTTGTCTGCAGAGGACAGCGTGGCTCTCCAGGACTCCAGCGACTaGGCACGACGGCGATTGTCGCTGCACCTGCTGCTGTGGCTCCGG +
Preference number: 1 (lower is better)
Translates to: LLSAEDSVALQDSSD*ARRRLSLHLLLWLR
Trigger: CCGGAGCCACAGCAGCAGGTGCAGCGACAATCGCCGTCGTGCGCAGTCGCTGGAGTCCTGGAGAGCCACGCTGTCCTCTGCAGACAACAG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR TCA 90 bp GCAGGCCCCGTCCACAGGGCGTCGATGCATTGGGGCACAGCGGACTaGTGCTGTTGTCTGCAGAGGACAGCGTGGCTCTCCAGGACTCCA +
Preference number: 1 (lower is better)
Translates to: AGPVHRASMHWGTAD*CCCLQRTAWLSRTP
Trigger: TGGAGTCCTGGAGAGCCACGCTGTCCTCTGCAGACAACAGCATCAGTCCGCTGTGCCCCAATGCATCGACGCCCTGTGGACGGGGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 90 bp GCTCAGACCACGGGTGGACTGCAGGCCCCGTCCACAGGGCGTCGATaGATTGGGGCACAGCGGACTGATGCTGTTGTCTGCAGAGGACAG +
Preference number: 1 (lower is better)
Translates to: AQTTGGLQAPSTGRR*IGAQRTDAVVCRGQ
Trigger: CTGTCCTCTGCAGACAACAGCATCAGTCCGCTGTGCCCCAATGCATCGACGCCCTGTGGACGGGGCCTGCAGTCCACCCGTGGTCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 90 bp ACAGGGCGTCGATGCATTGGGGCACAGCGGACTGATGCTGTTGTCTaGAGAGGACAGCGTGGCTCTCCAGGACTCCAGCGACTGCGCACG +
Preference number: 1 (lower is better)
Translates to: TGRRCIGAQRTDAVV*RGQRGSPGLQRLRT
Trigger: CGTGCGCAGTCGCTGGAGTCCTGGAGAGCCACGCTGTCCTCTGCAGACAACAGCATCAGTCCGCTGTGCCCCAATGCATCGACGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR TCA 90 bp CTCGCACACAACACCCAGACCTGCCACGCAGCCGGTACTGTTTCCTaGGCTCATCCGAGCAAGCGTCTCCACGGGGCAAAGCAAGGCCTT +
Preference number: 1 (lower is better)
Translates to: LAHNTQTCHAAGTVS*AHPSKRLHGAKQGL
Trigger: AAGGCCTTGCTTTGCCCCGTGGAGACGCTTGCTCGGATGAGCTCAGGAAACAGTACCGGCTGCGTGGCAGGTCTGGGTGTTGTGTGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 90 bp TCAACTCTAGCTCCTCTCATGATGAACCAGGTCATCGCCTGCGTCTaGCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGT +
Preference number: 1 (lower is better)
Translates to: STLAPLMMNQVIACV*LLRVAAGLRATASC
Trigger: ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGCGATGACCTGGTTCATCATGAGAGGAGCTAGAGTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 90 bp ACTGAGTCAACTCTAGCTCCTCTCATGATGAACCAGGTCATCGCCTaGGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCT +
Preference number: 1 (lower is better)
Translates to: TESTLAPLMMNQVIA*VCLLRVAAGLRATA
Trigger: AGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGCGATGACCTGGTTCATCATGAGAGGAGCTAGAGTTGACTCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR TCA 90 bp AGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTGCTTGGAACTaGCCGTCAGGAAGCAATCGGAGCCGAAGCCGCTGCTCCCAAACC +
Preference number: 1 (lower is better)
Translates to: RYQGFEAFLRACAWN*PSGSNRSRSRCSQT
Trigger: GGTTTGGGAGCAGCGGCTTCGGCTCCGATTGCTTCCTGACGGTCAGTTCCAAGCACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR TCA 90 bp TTGGGGACATTTCAGTTGACTGTCACCTGCCTCCGTACGGTGGTGTaGGAGGAATGCGCGCCACCACGGCGGCCAGGTTTTGACATCGTT +
Preference number: 1 (lower is better)
Translates to: LGTFQLTVTCLRTVV*EECAPPRRPGFDIV
Trigger: AACGATGTCAAAACCTGGCCGCCGTGGTGGCGCGCATTCCTCTCACACCACCGTACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 90 bp AGTATTCCAAAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTaGGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAG +
Preference number: 1 (lower is better)
Translates to: SIPKAQNTYRRLTEA*GDGHQIPRVRGVSQ
Trigger: CTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTTTGGAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTGGGGCTGGAATGACGTaGAGGGTAAGGTCGCCCAGC +
Preference number: 2 (lower is better)
Translates to: ACVCLLRVAAGLRATASCGAGMT*RVRSPS
Trigger: GCTGGGCGACCTTACCCTTCACGTCATTCCAGCCCC...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGCTCCGTACGGTGGTGTaGGAGGAATGCGCGCCACCA +
Preference number: 2 (lower is better)
Translates to: SLGPSRASARQAQTTGGLLRTVV*EECAPP
Trigger: TGGTGGCGCGCATTCCTCTCACACCACCGTACGGAG...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGAACCAGGTCATCGCCTaGGTCTGCCTCCTCCGGGTG +
Preference number: 2 (lower is better)
Translates to: SLGPSRASARQAQTTGGLNQVIA*VCLLRV
Trigger: CACCCGGAGGAGGCAGACGCAGGCGATGACCTGGTT...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAAGGCCGCCCATCGGCCTaGCCTTCCCGGAGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQGRPSA*PSRSRW
Trigger: CCACCTGCTCCGGGAAGGCCAGGCCGATGGGCGGCC...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CAA 90 bp GGTCCACCCCGCTGCTGGGCCACGCCAGCCGAATTCACACGGTCCTaGGGGACATTTCAGTTGACTGTCACCTGCCTCCGTACGGTGGTG +
Preference number: 2 (lower is better)
Translates to: GPPRCWATPAEFTRS*GTFQLTVTCLRTVV
Trigger: CACCACCGTACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTCGGCTGGCGTGGCCCAGCAGCGGGGTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CAA 90 bp CGTCCACAGGGCGTCGATGCATTGGGGCACAGCGGACTGATGCTGTaGTCTGCAGAGGACAGCGTGGCTCTCCAGGACTCCAGCGACTGC +
Preference number: 2 (lower is better)
Translates to: RPQGVDALGHSGLML*SAEDSVALQDSSDC
Trigger: GCAGTCGCTGGAGTCCTGGAGAGCCACGCTGTCCTCTGCAGACAACAGCATCAGTCCGCTGTGCCCCAATGCATCGACGCCCTGTGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAAGTCATCGCCTGCGTCTaGCTCCTCCGGGTGGCCGCA +
Preference number: 2 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQVIACV*LLRVAA
Trigger: TGCGGCCACCCGGAGGAGGCAGACGCAGGCGATGAC...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTCAACTCTCCACAGATTaGACCCACACAGGTGTCACT +
Preference number: 2 (lower is better)
Translates to: ACVCLLRVAAGLRATASCQLSTD*THTGVT
Trigger: AGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTG...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTATCCCAGACTGCTGCTaGTTTCCTGCAATTCTGGTG +
Preference number: 2 (lower is better)
Translates to: ACVCLLRVAAGLRATASCIPDCC*FPAILV
Trigger: CACCAGAATTGCAGGAAAGCAGCAGCAGTCTGGGAT...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGTCCATGCTTTTCTTCTaGCAAACTGACCACGGAGGG +
Preference number: 2 (lower is better)
Translates to: SLGPSRASARQAQTTGGLSMLFF*QTDHGG
Trigger: CCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGA...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGACGGAGCCGAAGCCGCTaGTCCCAAACCTGGCCGCCC +
Preference number: 2 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGRSRSR*SQTWPP
Trigger: GGGCGGCCAGGTTTGGGAGCAGCGGCTTCGGCTCCG...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp GAATTCACACGGTCCTTGGGGACATTTCAGTTGACTGTCACCTGCCTCCGTACGCGGAGCCGAAGCCGCTaGTCCCAAACCTGGCCGCCC +
Preference number: 2 (lower is better)
Translates to: EFTRSLGTFQLTVTCLRTRSRSR*SQTWPP
Trigger: GGGCGGCCAGGTTTGGGAGCAGCGGCTTCGGCTCCG...CGTACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAGAAGCCACCGCACCCTaGTCCACCCCGCTGCTGGGC +
Preference number: 2 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGEATAP*STPLLG
Trigger: GCCCAGCAGCGGGGTGGACCAGGGTGCGGTGGCTTC...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CAA 90 bp GGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTGCTaGGAACTGACCGTCAGGAAGCAATCGGAGCCGAAGCCGCTGCTC +
Preference number: 2 (lower is better)
Translates to: GHQIPRVRGVSQSLC*ELTVRKQSEPKPLL
Trigger: GAGCAGCGGCTTCGGCTCCGATTGCTTCCTGACGGTCAGTTCCAAGCACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTGGGGCTGGAATGACGTaGAGGGTAAGGTCGCCCAGC +
Preference number: 2 (lower is better)
Translates to: LACLVSGDGGTDFLSFATGAGMT*RVRSPS
Trigger: GCTGGGCGACCTTACCCTTCACGTCATTCCAGCCCC...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTCACCGCTTCCTGTCCTaGGTGTCCACTCCCCACGTG +
Preference number: 2 (lower is better)
Translates to: LACLVSGDGGTDFLSFATHRFLS*VSTPHV
Trigger: CACGTGGGGAGTGGACACTCAGGACAGGAAGCGGTG...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp CGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCAGACTCCTCTGGGGCTaGAATGACGTGAAGGGTAAG +
Preference number: 2 (lower is better)
Translates to: RRLTEACGDGHQIPRVRGRLLWG*NDVKGK
Trigger: CTTACCCTTCACGTCATTCCAGCCCCAGAGGAGTCT...GCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp AAGTATTCCAAAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGCTGCTCCCAAACCTaGCCGCCCATCGGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: KYSKSPKHLSETHGSLRRRCSQT*PPIGLA
Trigger: GGCCAGGCCGATGGGCGGCCAGGTTTGGGAGCAGCG...TCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTTTGGAATACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGTTAGACCTAAGGCACTaGCAGAAACCCTCTGCAATT +
Preference number: 2 (lower is better)
Translates to: SLGPSRASARQAQTTGGLLDLRH*QKPSAI
Trigger: AATTGCAGAGGGTTTCTGCCAGTGCCTTAGGTCTAA...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp GCTTTCGGCGCAGATGGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGGTTCCCTACTCTGAATaGACCTTAGCTTGTCTGGTG +
Preference number: 2 (lower is better)
Translates to: AFGADGGHRQKPGATAELVPYSE*TLACLV
Trigger: CACCAGACAAGCTAAGGTGCATTCAGAGTAGGGAAC...CAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGGGTCCACCCCGCTGCTaGGCCACGCCAGCCGAATTC +
Preference number: 2 (lower is better)
Translates to: RAELTVLGNPQALEIIWMGPPRC*ATPAEF
Trigger: GAATTCGGCTGGCGTGGCCCAGCAGCGGGGTGGACC...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAAACCACTTTTGTGCAGTaGAGACACCCGTGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQTTFVQ*RHPWLR
Trigger: TCTCAGCCACGGGTGTCTTCACTGCACAAAAGTGGT...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTGCCTGTGCTTGGAACTaGCCGTCAGGAAGCAATCGG +
Preference number: 2 (lower is better)
Translates to: LACLVSGDGGTDFLSFATACAWN*PSGSNR
Trigger: CCGATTGCTTCCTGACGGTCAGTTCCAAGCACAGGC...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTCTCCGTTTTGCCTTATaGAAAAATGGGAAAGTATTC +
Preference number: 2 (lower is better)
Translates to: ACVCLLRVAAGLRATASCLRFAL*KNGKVF
Trigger: GAATACTTTCCCATTTTTTCATAAGGCAAAACGGAG...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAACTGGCAGAAACCCTCTaGAATTCTGACGCCATCGAG +
Preference number: 2 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQLAETL*NSDAIE
Trigger: CTCGATGGCGTCAGAATTGCAGAGGGTTTCTGCCAG...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAAAGACTCCTCTGGGGCTaGAATGACGTGAAGGGTAAG +
Preference number: 2 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQRLLWG*NDVKGK
Trigger: CTTACCCTTCACGTCATTCCAGCCCCAGAGGAGTCT...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGTCTGCCTCCTCCGGGTaGCCGCAGGTCTTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: RAELTVLGNPQALEIIWMSASSG*PQVLGP
Trigger: TGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGA...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAGCCTGTGCTTGGAACTaGCCGTCAGGAAGCAATCGG +
Preference number: 2 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGACAWN*PSGSNR
Trigger: CCGATTGCTTCCTGACGGTCAGTTCCAAGCACAGGC...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAACCTATCCCAGACTGCTaGTGCTTTCCTGCAATTCTG +
Preference number: 2 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQPIPDC*CFPAIL
Trigger: CAGAATTGCAGGAAAGCAGCAGCAGTCTGGGATAGG...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGAGGCGCCAGCCACCGTaGCCAGCCTTCCTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: RAELTVLGNPQALEIIWMRRQPP*PAFLAF
Trigger: GAAAGCAAGGAAGGCTGGGCACGGTGGCTGGCGCCT...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAACATCGTTCCCTACTCTaGATGCACCTTAGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQHRSLL*MHLSLS
Trigger: AGACAAGCTAAGGTGCATTCAGAGTAGGGAACGATG...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp GAATTCACACGGTCCTTGGGGACATTTCAGTTGACTGTCACCTGCCTCCGTACGAGACTCACGGAAGCCTaGGGAGACGGTCACCAGATA +
Preference number: 2 (lower is better)
Translates to: EFTRSLGTFQLTVTCLRTRLTEA*GDGHQI
Trigger: TATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCT...CGTACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp GAATTCACACGGTCCTTGGGGACATTTCAGTTGACTGTCACCTGCCTCCGTACGCCTTCCCGGAGCAGGTaGCAACACGGAGAACCTTTT +
Preference number: 2 (lower is better)
Translates to: EFTRSLGTFQLTVTCLRTPSRSR*QHGEPF
Trigger: AAAAGGTTCTCCGTGTTGCCACCTGCTCCGGGAAGG...CGTACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTTTTCTTCTGACAAACTaGCCACGGAGGGAGAGCTCT +
Preference number: 2 (lower is better)
Translates to: LACLVSGDGGTDFLSFATFLLTN*PRRESS
Trigger: AGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAA...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp CAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCATCCATGCTTTTCTTCTaGCAAACTGACCACGGAGGG +
Preference number: 2 (lower is better)
Translates to: QNTYRRLTEACGDGHQIPSMLFF*QTDHGG
Trigger: CCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGA...TGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp GAATTCACACGGTCCTTGGGGACATTTCAGTTGACTGTCACCTGCCTCCGTACGACCACTTTTGTGCAGTaGAGACACCCGTGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: EFTRSLGTFQLTVTCLRTTTFVQ*RHPWLR
Trigger: TCTCAGCCACGGGTGTCTTCACTGCACAAAAGTGGT...CGTACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTATCCCAGACTGCTGCTaGTTTCCTGCAATTCTGGTG +
Preference number: 2 (lower is better)
Translates to: LACLVSGDGGTDFLSFATIPDCC*FPAILV
Trigger: CACCAGAATTGCAGGAAAGCAGCAGCAGTCTGGGAT...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAGGAGGCTCACTATGTTaGCAGACCGGTCTCGAATTC +
Preference number: 2 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGGGSLC*QTGLEF
Trigger: GAATTCGAGACCGGTCTGGCAACATAGTGAGCCTCC...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTACCTGGTCCACCCCGCTaGTGGGCCACGCCAGCCGAA +
Preference number: 2 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLPGPPR*WATPAE
Trigger: TTCGGCTGGCGTGGCCCAGCAGCGGGGTGGACCAGG...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTACGCTGCTCCCAAACCTaGCCGCCCATCGGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLRCSQT*PPIGLA
Trigger: GGCCAGGCCGATGGGCGGCCAGGTTTGGGAGCAGCG...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTACTGTGGGTCCCAGGGTaGCCCCTCCCTGGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLLWVPG*PLPGSQ
Trigger: CTGGGACCCAGGGAGGGGCCACCCTGGGACCCACAG...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGCAACTCTCCACAGATTaGACCCACACAGGTGTCACT +
Preference number: 2 (lower is better)
Translates to: GLEDPANITYKLLGGRGGQLSTD*THTGVT
Trigger: AGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTG...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGCAGTTTCCAAGTAGCTaGGACTACAGGCGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: RAELTVLGNPQALEIIWMQFPSS*DYRRQP
Trigger: TGGCTGGCGCCTGTAGTCTCAGCTACTTGGAAACTG...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGCCTATCCCAGACTGCTaGTGCTTTCCTGCAATTCTG +
Preference number: 2 (lower is better)
Translates to: GLEDPANITYKLLGGRGGPIPDC*CFPAIL
Trigger: CAGAATTGCAGGAAAGCAGCAGCAGTCTGGGATAGG...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGCTCCCTATCCCAGACTaGTGCTGCTTTCCTGCAATT +
Preference number: 2 (lower is better)
Translates to: GLEDPANITYKLLGGRGGLPIPD*CCFPAI
Trigger: AATTGCAGGAAAGCAGCAGCAGTCTGGGATAGGGAG...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGATTAGCACCACTTTTGTaGAGTGAAGACACCCGTGGC +
Preference number: 2 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGLAPLL*SEDTRG
Trigger: GCCACGGGTGTCTTCACTGCACAAAAGTGGTGCTAA...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAATTCCTGCAATTCTGGTaGTCTTTTTGTTGCCTCATC +
Preference number: 2 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQFLQFW*SFCCLI
Trigger: GATGAGGCAACAAAAAGACCACCAGAATTGCAGGAA...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGTGTCCACTCCCCACGTaGACTCCCAAAAAGTGTGTT +
Preference number: 2 (lower is better)
Translates to: GLEDPANITYKLLGGRGGCPLPT*TPKKCV
Trigger: AACACACTTTTTGGGAGTCCACGTGGGGAGTGGACA...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp GAATTCACACGGTCCTTGGGGACATTTCAGTTGACTGTCACCTGCCTCCGTACGGCCTTCCTTGCTTTCTaGATTAGACCTAAGGCACTG +
Preference number: 2 (lower is better)
Translates to: EFTRSLGTFQLTVTCLRTAFLAF*IRPKAL
Trigger: CAGTGCCTTAGGTCTAATTCAGAAAGCAAGGAAGGC...CGTACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAGCCTTCCTTGCTTTCTaGATTAGACCTAAGGCACTG +
Preference number: 2 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGAFLAF*IRPKAL
Trigger: CAGTGCCTTAGGTCTAATTCAGAAAGCAAGGAAGGC...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGCATCGTTCCCTACTCTaGATGCACCTTAGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: GLEDPANITYKLLGGRGGHRSLL*MHLSLS
Trigger: AGACAAGCTAAGGTGCATTCAGAGTAGGGAACGATG...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp CAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAGCTTTCCTGCAATTCTaGTGGTCTTTTTGTTGCCTC +
Preference number: 2 (lower is better)
Translates to: QNTYRRLTEACGDGHQIPAFLQF*WSFCCL
Trigger: GAGGCAACAAAAAGACCACCAGAATTGCAGGAAAGC...TGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTTTAGACCTAAGGCACTaGCAGAAACCCTCTGCAATT +
Preference number: 2 (lower is better)
Translates to: LACLVSGDGGTDFLSFATLDLRH*QKPSAI
Trigger: AATTGCAGAGGGTTTCTGCCAGTGCCTTAGGTCTAA...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAGTTGCCTCATCTGATTaGGACTTTGGGGAAACAACA +
Preference number: 2 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGVASSD*DFGETT
Trigger: TGTTGTTTCCCCAAAGTCTCAATCAGATGAGGCAAC...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAGAAGACACCCGTGGCTaGGATTTCTTAAATCTCACT +
Preference number: 2 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGEDTRG*DFLNLT
Trigger: AGTGAGATTTAAGAAATCTCAGCCACGGGTGTCTTC...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTACACCGCTTCCTGTCCTaGGTGTCCACTCCCCACGTG +
Preference number: 2 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLHRFLS*VSTPHV
Trigger: CACGTGGGGAGTGGACACTCAGGACAGGAAGCGGTG...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTACCTGCCTCCGTACGGTaGTGTGAGAGGAATGCGCGC +
Preference number: 2 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLPASVR*CERNAR
Trigger: GCGCGCATTCCTCTCACACCACCGTACGGAGGCAGG...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAATTTATCAATAAATGCTaGGTCACTTGCTCTTCCAAA +
Preference number: 2 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQFINKC*VTCSSK
Trigger: TTTGGAAGAGCAAGTGACGCAGCATTTATTGATAAA...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGATTCCTGCAATTCTGGTaGTCTTTTTGTTGCCTCATC +
Preference number: 2 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGFLQFW*SFCCLI
Trigger: GATGAGGCAACAAAAAGACCACCAGAATTGCAGGAA...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp CTTTTTCCATGCTTTTCTTCTGACAAACTGACCACGGAGGGAGAGCTCTCCTCCGTTGCCTCATCTGATTaGGACTTTGGGGAAACAACA +
Preference number: 2 (lower is better)
Translates to: LFPCFSSDKLTTEGELSSVASSD*DFGETT
Trigger: TGTTGTTTCCCCAAAGTCTCAATCAGATGAGGCAAC...GGAGGAGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGTTAGCACCACTTTTGTaGAGTGAAGACACCCGTGGC +
Preference number: 2 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLLAPLL*SEDTRG
Trigger: GCCACGGGTGTCTTCACTGCACAAAAGTGGTGCTAA...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp ACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTTTAAAAACAAAGGAATaGAACTCAACTCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: TYRRLTEACGDGHQIPRVLKTKE*NSTLHR
Trigger: TCTGTGGAGAGTTGAGTTCCATTCCTTTGTTTTTAA...AACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGGGTGTCACTGTTTACTaGATTAGCACCACTTTTGTG +
Preference number: 2 (lower is better)
Translates to: RAELTVLGNPQALEIIWMGVTVY*ISTTFV
Trigger: CACAAAAGTGGTGCTAATTCAGTAAACAGTGACACC...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp ATTAGACCTAAGGCACTGGCAGAAACCCTCTGCAATTCTGACGCCATCGAGATCGGTGTCACTGTTTACTaGATTAGCACCACTTTTGTG +
Preference number: 2 (lower is better)
Translates to: IRPKALAETLCNSDAIEIGVTVY*ISTTFV
Trigger: CACAAAAGTGGTGCTAATTCAGTAAACAGTGACACC...GATCTCGATGGCGTCAGAATTGCAGAGGGTTTCTGCCAGTGCCTTAGGTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR TCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGGAAGACACCCGTGGCTaGGATTTCTTAAATCTCACT +
Preference number: 2 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLEDTRG*DFLNLT
Trigger: AGTGAGATTTAAGAAATCTCAGCCACGGGTGTCTTC...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CCA 90 bp ATTAGACCTAAGGCACTGGCAGAAACCCTCTGCAATTCTGACGCCATCGAGATCTTAAAAACAAAGGAATaGAACTCAACTCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: IRPKALAETLCNSDAIEILKTKE*NSTLHR
Trigger: TCTGTGGAGAGTTGAGTTCCATTCCTTTGTTTTTAA...GATCTCGATGGCGTCAGAATTGCAGAGGGTTTCTGCCAGTGCCTTAGGTCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR GCA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTATTTATCAATAAATGCTaGGTCACTTGCTCTTCCAAA +
Preference number: 2 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLFINKC*VTCSSK
Trigger: TTTGGAAGAGCAAGTGACGCAGCATTTATTGATAAA...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 72 bp AGGACTCCAGCGACTGCGCACGACGGCGATTGTCGCTaGACCTGCTGCTGTGGCTCCGGGGCACCGCGGGGC +
Preference number: 3 (lower is better)
Translates to: RTPATAHDGDCR*TCCCGSGAPRG
Trigger: GCCCCGCGGTGCCCCGGAGCCACAGCAGCAGGTGCAGCGACAATCGCCGTCGTGCGCAGTCGCTGGAGTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CCA 72 bp GGAAGCAATCGGAGCCGAAGCCGCTGCTCCCAAACCTaGCCGCCCATCGGCCTGGCCTTCCCGGAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: GSNRSRSRCSQT*PPIGLAFPEQV
Trigger: CACCTGCTCCGGGAAGGCCAGGCCGATGGGCGGCCAGGTTTGGGAGCAGCGGCTTCGGCTCCGATTGCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CCA 72 bp GGTCTGAAGCCACCGCACCCTGGTCCACCCCGCTGCTaGGCCACGCCAGCCGAATTCACACGGTCCTTGGGG +
Preference number: 3 (lower is better)
Translates to: GLKPPHPGPPRC*ATPAEFTRSLG
Trigger: CCCCAAGGACCGTGTGAATTCGGCTGGCGTGGCCCAGCAGCGGGGTGGACCAGGGTGCGGTGGCTTCAGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 72 bp GAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTaGAGGCCCCGTCCACAGGGCGTCGATGCATTGGGG +
Preference number: 3 (lower is better)
Translates to: ELQPGKLRPRVD*RPRPQGVDALG
Trigger: CCCCAATGCATCGACGCCCTGTGGACGGGGCCTGCAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CCA 72 bp GAAGCCGCTGCTCCCAAACCTGGCCGCCCATCGGCCTaGCCTTCCCGGAGCAGGTGGCAACACGGAGAACCT +
Preference number: 3 (lower is better)
Translates to: EAAAPKPGRPSA*PSRSRWQHGEP
Trigger: AGGTTCTCCGTGTTGCCACCTGCTCCGGGAAGGCCAGGCCGATGGGCGGCCAGGTTTGGGAGCAGCGGCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CCA 72 bp TGCGCACGACGGCGATTGTCGCTGCACCTGCTGCTGTaGCTCCGGGGCACCGCGGGGCTCAGTTCAGCTTTC +
Preference number: 3 (lower is better)
Translates to: CARRRLSLHLLL*LRGTAGLSSAF
Trigger: GAAAGCTGAACTGAGCCCCGCGGTGCCCCGGAGCCACAGCAGCAGGTGCAGCGACAATCGCCGTCGTGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 72 bp GCAGAGGACAGCGTGGCTCTCCAGGACTCCAGCGACTaGGCACGACGGCGATTGTCGCTGCACCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: AEDSVALQDSSD*ARRRLSLHLLL
Trigger: CAGCAGCAGGTGCAGCGACAATCGCCGTCGTGCGCAGTCGCTGGAGTCCTGGAGAGCCACGCTGTCCTCTGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CCA 72 bp GGGCACCGCGGGGCTCAGTTCAGCTTTCGGCGCAGATaGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGA +
Preference number: 3 (lower is better)
Translates to: GHRGAQFSFRRR*RPSAETRSYSR
Trigger: TCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGCTGAACTGAGCCCCGCGGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 72 bp GCTCCTCTCATGATGAACCAGGTCATCGCCTGCGTCTaGCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACC +
Preference number: 3 (lower is better)
Translates to: APLMMNQVIACV*LLRVAAGLRAT
Trigger: GGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGCGATGACCTGGTTCATCATGAGAGGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 72 bp ACGGGTGGACTGCAGGCCCCGTCCACAGGGCGTCGATaGATTGGGGCACAGCGGACTGATGCTGTTGTCTGC +
Preference number: 3 (lower is better)
Translates to: TGGLQAPSTGRR*IGAQRTDAVVC
Trigger: GCAGACAACAGCATCAGTCCGCTGTGCCCCAATGCATCGACGCCCTGTGGACGGGGCCTGCAGTCCACCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CAA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTGTAAGGTCGCCCAGCTaGGCCAGGGCAGTCGGGGGC +
Preference number: 3 (lower is better)
Translates to: PAETVTRYQGFEAFLRACVRSPS*ARAVGG
Trigger: GCCCCCGACTGCCCTGGCCAAGCTGGGCGACCTTAC...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CAA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTTCTCAGAGCCTGTGCTaGGAACTGACCGTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: ACVCLLRVAAGLRATASCSQSLC*ELTVRK
Trigger: CTTCCTGACGGTCAGTTCCAAGCACAGGCTCTGAGA...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR TCA 72 bp GTCCACAGGGCGTCGATGCATTGGGGCACAGCGGACTaGTGCTGTTGTCTGCAGAGGACAGCGTGGCTCTCC +
Preference number: 3 (lower is better)
Translates to: VHRASMHWGTAD*CCCLQRTAWLS
Trigger: GGAGAGCCACGCTGTCCTCTGCAGACAACAGCATCAGTCCGCTGTGCCCCAATGCATCGACGCCCTGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CAA 90 bp CCAAACCTGGCCGCCCATCGGCCTGGCCTTCCCGGAGCAGGTGGCAACACGGAGGAATTAGCACCACTTTaGTGCAGTGAAGACACCCGT +
Preference number: 3 (lower is better)
Translates to: PNLAAHRPGLPGAGGNTEELAPL*CSEDTR
Trigger: ACGGGTGTCTTCACTGCACAAAAGTGGTGCTAATTC...CTCCGTGTTGCCACCTGCTCCGGGAAGGCCAGGCCGATGGGCGGCCAGGTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 72 bp ACTCTAGCTCCTCTCATGATGAACCAGGTCATCGCCTaGGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGG +
Preference number: 3 (lower is better)
Translates to: TLAPLMMNQVIA*VCLLRVAAGLR
Trigger: CCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGCGATGACCTGGTTCATCATGAGAGGAGCTAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 72 bp CGATGCATTGGGGCACAGCGGACTGATGCTGTTGTCTaGAGAGGACAGCGTGGCTCTCCAGGACTCCAGCGA +
Preference number: 3 (lower is better)
Translates to: RCIGAQRTDAVV*RGQRGSPGLQR
Trigger: TCGCTGGAGTCCTGGAGAGCCACGCTGTCCTCTGCAGACAACAGCATCAGTCCGCTGTGCCCCAATGCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR TCA 72 bp TTTCAGTTGACTGTCACCTGCCTCCGTACGGTGGTGTaGGAGGAATGCGCGCCACCACGGCGGCCAGGTTTT +
Preference number: 3 (lower is better)
Translates to: FQLTVTCLRTVV*EECAPPRRPGF
Trigger: AAAACCTGGCCGCCGTGGTGGCGCGCATTCCTCTCACACCACCGTACGGAGGCAGGTGACAGTCAACTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CAA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGGTAAGGTCGCCCAGCTaGGCCAGGGCAGTCGGGGGC +
Preference number: 3 (lower is better)
Translates to: RAELTVLGNPQALEIIWMVRSPS*ARAVGG
Trigger: GCCCCCGACTGCCCTGGCCAAGCTGGGCGACCTTAC...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CAA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAATTGGGGACATTTCAGTaGACTGTCACCTGCCTCCGT +
Preference number: 3 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQLGTFQ*TVTCLR
Trigger: ACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAA...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 72 bp AAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTaGGGAGACGGTCACCAGATACCAAGGGTTCGAGGC +
Preference number: 3 (lower is better)
Translates to: KAQNTYRRLTEA*GDGHQIPRVRG
Trigger: GCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CAA 90 bp CGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCCTGGTGGTCTTTTTGTaGCCTCATCTGATTGAGACT +
Preference number: 3 (lower is better)
Translates to: RRLTEACGDGHQIPRVRGLVVFL*PHLIET
Trigger: AGTCTCAATCAGATGAGGCAACAAAAAGACCACCAG...GCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR GCA 72 bp GACCGGTCTCGAATTCTTGGGCTCAAGAGATCCTCCTaGCTCAGTTTCCAAGTAGCTGAGACTACAGGCGCC +
Preference number: 3 (lower is better)
Translates to: DRSRILGLKRSS*LSFQVAETTGA
Trigger: GGCGCCTGTAGTCTCAGCTACTTGGAAACTGAGGCAGGAGGATCTCTTGAGCCCAAGAATTCGAGACCGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CAA 90 bp ACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTTCAACTCTCCACAGATaGAACCCACACAGGTGTCAC +
Preference number: 3 (lower is better)
Translates to: TYRRLTEACGDGHQIPRVSTLHR*NPHRCH
Trigger: GTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGA...AACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CAA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTCGTGCCCAGCCTTCCTaGCTTTCTGAATTAGACCTA +
Preference number: 3 (lower is better)
Translates to: LACLVSGDGGTDFLSFATRAQPS*LSELDL
Trigger: TAGGTCTAATTCAGAAAGCAAGGAAGGCTGGGCACG...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CAA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGTTGGGGACATTTCAGTaGACTGTCACCTGCCTCCGT +
Preference number: 3 (lower is better)
Translates to: GLEDPANITYKLLGGRGGLGTFQ*TVTCLR
Trigger: ACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAA...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CAA 90 bp GAATTCACACGGTCCTTGGGGACATTTCAGTTGACTGTCACCTGCCTCCGTACGGAATTAGCACCACTTTaGTGCAGTGAAGACACCCGT +
Preference number: 3 (lower is better)
Translates to: EFTRSLGTFQLTVTCLRTELAPL*CSEDTR
Trigger: ACGGGTGTCTTCACTGCACAAAAGTGGTGCTAATTC...CGTACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CAA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTATTCTGGTGGTCTTTTaGTTGCCTCATCTGATTGAG +
Preference number: 3 (lower is better)
Translates to: LACLVSGDGGTDFLSFATILVVF*LPHLIE
Trigger: CTCAATCAGATGAGGCAACAAAAAGACCACCAGAAT...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CCA 72 bp CAGCCTTCCTTGCTTTCTGAATTAGACCTAAGGCACTaGCAGAAACCCTCTGCAATTCTGACGCCATCGAGA +
Preference number: 3 (lower is better)
Translates to: QPSLLSELDLRH*QKPSAILTPSR
Trigger: TCTCGATGGCGTCAGAATTGCAGAGGGTTTCTGCCAGTGCCTTAGGTCTAATTCAGAAAGCAAGGAAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CAA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTATCAACTCTCCACAGATaGAACCCACACAGGTGTCAC +
Preference number: 3 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLSTLHR*NPHRCH
Trigger: GTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGA...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR-3UTR CAA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTACTGGTGGTCTTTTTGTaGCCTCATCTGATTGAGACT +
Preference number: 3 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLLVVFL*PHLIET
Trigger: AGTCTCAATCAGATGAGGCAACAAAAAGACCACCAG...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTCCTGGTCCACCCCGCTaGTGGGCCACGCCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: ACVCLLRVAAGLRATASCPGPPR*WATPAE
Trigger: TTCGGCTGGCGTGGCCCAGCAGCGGGGTGGACCAGG...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGGGCCGCCCATCGGCCTaGCCTTCCCGGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLGPSRASARQAQTTGGLGRPSA*PSRSRW
Trigger: CCACCTGCTCCGGGAAGGCCAGGCCGATGGGCGGCC...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTCTGTGGGTCCCAGGGTaGCCCCTCCCTGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: ACVCLLRVAAGLRATASCLWVPG*PLPGSQ
Trigger: CTGGGACCCAGGGAGGGGCCACCCTGGGACCCACAG...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CCAAACCTGGCCGCCCATCGGCCTGGCCTTCCCGGAGCAGGTGGCAACACGGAGCAGAGAGGTCGTCGCTaGCCGGGAGCTCCGCGGCTT +
Preference number: 4 (lower is better)
Translates to: PNLAAHRPGLPGAGGNTEQRGRR*PGAPRL
Trigger: AAGCCGCGGAGCTCCCGGGCAGCGACGACCTCTCTG...CTCCGTGTTGCCACCTGCTCCGGGAAGGCCAGGCCGATGGGCGGCCAGGTTTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGCGCTGCTCCCAAACCTaGCCGCCCATCGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLGPSRASARQAQTTGGLRCSQT*PPIGLA
Trigger: GGCCAGGCCGATGGGCGGCCAGGTTTGGGAGCAGCG...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTAGGGTGGCCCCTCCCTaGGTCCCAGCCGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ACVCLLRVAAGLRATASCRVAPP*VPAELQ
Trigger: CTGAAGCTCGGCTGGGACCCAGGGAGGGGCCACCCT...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTCTCCGTACGGTGGTGTaGGAGGAATGCGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: ACVCLLRVAAGLRATASCLRTVV*EECAPP
Trigger: TGGTGGCGCGCATTCCTCTCACACCACCGTACGGAG...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GCTTTCGGCGCAGATGGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGCGCTGCTCCCAAACCTaGCCGCCCATCGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: AFGADGGHRQKPGATAELRCSQT*PPIGLA
Trigger: GGCCAGGCCGATGGGCGGCCAGGTTTGGGAGCAGCG...CAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CCAAACCTGGCCGCCCATCGGCCTGGCCTTCCCGGAGCAGGTGGCAACACGGAGACACGATGGTGGTACTaGGGAAGCGGGTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PNLAAHRPGLPGAGGNTETRWWY*GSGWAC
Trigger: ACAGGCCCACCCGCTTCCTCAGTACCACCATCGTGT...CTCCGTGTTGCCACCTGCTCCGGGAAGGCCAGGCCGATGGGCGGCCAGGTTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTTGGGGCACAGCGGACTaGTGCTGTTGTCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ACVCLLRVAAGLRATASCWGTAD*CCCLQR
Trigger: CCTCTGCAGACAACAGCATCAGTCCGCTGTGCCCCA...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTTCCACAGGGCGTCGATaGATTGGGGCACAGCGGACT +
Preference number: 4 (lower is better)
Translates to: ACVCLLRVAAGLRATASCSTGRR*IGAQRT
Trigger: AGTCCGCTGTGCCCCAATGCATCGACGCCCTGTGGA...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GCTTTCGGCGCAGATGGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGAGACCACGGGTGGACTaGAGGCCCCGTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: AFGADGGHRQKPGATAELRPRVD*RPRPQG
Trigger: GCCCTGTGGACGGGGCCTGCAGTCCACCCGTGGTCT...CAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GCTTTCGGCGCAGATGGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGGGTCCACCCCGCTGCTaGGCCACGCCAGCCGAATTC +
Preference number: 4 (lower is better)
Translates to: AFGADGGHRQKPGATAELGPPRC*ATPAEF
Trigger: GAATTCGGCTGGCGTGGCCCAGCAGCGGGGTGGACC...CAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGGCTGCACGTCGTCGATaGAGTGCCTCTCGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: SLGPSRASARQAQTTGGLAARRR*SASRSR
Trigger: ACGACTCCGAGAGGCACTTCATCGACGACGTGCAGC...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGTGGGGCACAGCGGACTaGTGCTGTTGTCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SLGPSRASARQAQTTGGLWGTAD*CCCLQR
Trigger: CCTCTGCAGACAACAGCATCAGTCCGCTGTGCCCCA...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GCTTTCGGCGCAGATGGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGACACAGGTGACCGTCTaGCTGCAGGAGGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: AFGADGGHRQKPGATAELTQVTV*LQEATA
Trigger: GGCGGTGGCCTCCTGCAGCCAGACGGTCACCTGTGT...CAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAAGAAGCCACCGCACCCTaGTCCACCCCGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQEATAP*STPLLG
Trigger: GCCCAGCAGCGGGGTGGACCAGGGTGCGGTGGCTTC...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAACTGTGGGTCCCAGGGTaGCCCCTCCCTGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQLWVPG*PLPGSQ
Trigger: CTGGGACCCAGGGAGGGGCCACCCTGGGACCCACAG...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CAA 72 bp GTGGACTGCAGGCCCCGTCCACAGGGCGTCGATGCATaGGGGCACAGCGGACTGATGCTGTTGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VDCRPRPQGVDA*GHSGLMLLSAE
Trigger: CTCTGCAGACAACAGCATCAGTCCGCTGTGCCCCAATGCATCGACGCCCTGTGGACGGGGCCTGCAGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp ACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTGGCGGGAGGCAGGTCTaGAGCCACCGCACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: TYRRLTEACGDGHQIPRVGGRQV*SHRTLV
Trigger: GACCAGGGTGCGGTGGCTTCAGACCTGCCTCCCGCC...AACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTAGACCACGGGTGGACTaGAGGCCCCGTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: PAETVTRYQGFEAFLRACRPRVD*RPRPQG
Trigger: GCCCTGTGGACGGGGCCTGCAGTCCACCCGTGGTCT...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTAAGCGGGTGGGCCTGTaGCGTGGCTCGAAGCGCACC +
Preference number: 4 (lower is better)
Translates to: PAETVTRYQGFEAFLRACKRVGL*RGSKRT
Trigger: GGTGCGCTTCGAGCCACGCCACAGGCCCACCCGCTT...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CCAAACCTGGCCGCCCATCGGCCTGGCCTTCCCGGAGCAGGTGGCAACACGGAGAGACTCCTCTGGGGCTaGAATGACGTGAAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: PNLAAHRPGLPGAGGNTERLLWG*NDVKGK
Trigger: CTTACCCTTCACGTCATTCCAGCCCCAGAGGAGTCT...CTCCGTGTTGCCACCTGCTCCGGGAAGGCCAGGCCGATGGGCGGCCAGGTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTTCCATGCTTTTCTTCTaGCAAACTGACCACGGAGGG +
Preference number: 4 (lower is better)
Translates to: ACVCLLRVAAGLRATASCSMLFF*QTDHGG
Trigger: CCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGA...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CCAAACCTGGCCGCCCATCGGCCTGGCCTTCCCGGAGCAGGTGGCAACACGGAGCAACTCTCCACAGATTaGACCCACACAGGTGTCACT +
Preference number: 4 (lower is better)
Translates to: PNLAAHRPGLPGAGGNTEQLSTD*THTGVT
Trigger: AGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTG...CTCCGTGTTGCCACCTGCTCCGGGAAGGCCAGGCCGATGGGCGGCCAGGTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCACCTGGTCCACCCCGCTaGTGGGCCACGCCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: QNTYRRLTEACGDGHQIPPGPPR*WATPAE
Trigger: TTCGGCTGGCGTGGCCCAGCAGCGGGGTGGACCAGG...TGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GCTTTCGGCGCAGATGGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGCTGGGAGGTGAAGGTTaGAGTGAGCTGAGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: AFGADGGHRQKPGATAELLGGEG*SELSWR
Trigger: GCGCCAACTCAGCTCACTGCAACCTTCACCTCCCAG...CAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTGGTGGGCCTGTGGCGTaGCTCGAAGCGCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: LACLVSGDGGTDFLSFATGGPVA*LEAHLG
Trigger: GCCGAGGTGCGCTTCGAGCCACGCCACAGGCCCACC...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAGGCCGCCCATCGGCCTaGCCTTCCCGGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGGRPSA*PSRSRW
Trigger: CCACCTGCTCCGGGAAGGCCAGGCCGATGGGCGGCC...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GAATTCACACGGTCCTTGGGGACATTTCAGTTGACTGTCACCTGCCTCCGTACGCTGCACCTGCTGCTGTaGCTCCGGGGCACCGCGGGG +
Preference number: 4 (lower is better)
Translates to: EFTRSLGTFQLTVTCLRTLHLLL*LRGTAG
Trigger: CCCCGCGGTGCCCCGGAGCCACAGCAGCAGGTGCAG...CGTACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGAACACGAATCCACTGTaGATGGCGTCCTCTGACCCA +
Preference number: 4 (lower is better)
Translates to: SLGPSRASARQAQTTGGLNTNPL*MASSDP
Trigger: TGGGTCAGAGGACGCCATCCACAGTGGATTCGTGTT...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAGGCGGGAGGCAGGTCTaGAGCCACCGCACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGGGRQV*SHRTLV
Trigger: GACCAGGGTGCGGTGGCTTCAGACCTGCCTCCCGCC...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGCTCCCTATCCCAGACTaGTGCTGCTTTCCTGCAATT +
Preference number: 4 (lower is better)
Translates to: SLGPSRASARQAQTTGGLLPIPD*CCFPAI
Trigger: AATTGCAGGAAAGCAGCAGCAGTCTGGGATAGGGAG...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTGTCATCGCCTGCGTCTaGCTCCTCCGGGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LACLVSGDGGTDFLSFATVIACV*LLRVAA
Trigger: TGCGGCCACCCGGAGGAGGCAGACGCAGGCGATGAC...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTAACCAGGTCATCGCCTaGGTCTGCCTCCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: PAETVTRYQGFEAFLRACNQVIA*VCLLRV
Trigger: CACCCGGAGGAGGCAGACGCAGGCGATGACCTGGTT...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAAAGGCGCCAGCCACCGTaGCCAGCCTTCCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQRRQPP*PAFLAF
Trigger: GAAAGCAAGGAAGGCTGGGCACGGTGGCTGGCGCCT...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GCTTTCGGCGCAGATGGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGGAGCTGAGCTTACAGTaGTCGGTAACCCTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: AFGADGGHRQKPGATAELELSLQ*SVTLRH
Trigger: GTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTC...CAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTCAGGACTCCAGCGACTaGGCACGACGGCGATTGTCG +
Preference number: 4 (lower is better)
Translates to: PAETVTRYQGFEAFLRACQDSSD*ARRRLS
Trigger: CGACAATCGCCGTCGTGCGCAGTCGCTGGAGTCCTG...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGGGTGGGCCTGTGGCGTaGCTCGAAGCGCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: GLEDPANITYKLLGGRGGGGPVA*LEAHLG
Trigger: GCCGAGGTGCGCTTCGAGCCACGCCACAGGCCCACC...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGTGTCCACTCCCCACGTaGACTCCCAAAAAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SLGPSRASARQAQTTGGLCPLPT*TPKKCV
Trigger: AACACACTTTTTGGGAGTCCACGTGGGGAGTGGACA...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAACCTGCCTCCGTACGGTaGTGTGAGAGGAATGCGCGC +
Preference number: 4 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQPASVR*CERNAR
Trigger: GCGCGCATTCCTCTCACACCACCGTACGGAGGCAGG...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGGAAGCCACCGCACCCTaGTCCACCCCGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLEDPANITYKLLGGRGGEATAP*STPLLG
Trigger: GCCCAGCAGCGGGGTGGACCAGGGTGCGGTGGCTTC...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CAA 72 bp CGCTGCTGGGCCACGCCAGCCGAATTCACACGGTCCTaGGGGACATTTCAGTTGACTGTCACCTGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: RCWATPAEFTRS*GTFQLTVTCLR
Trigger: ACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTCGGCTGGCGTGGCCCAGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp ACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTGGGGCTGGAATGACGTaGAGGGTAAGGTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TYRRLTEACGDGHQIPRVGAGMT*RVRSPS
Trigger: GCTGGGCGACCTTACCCTTCACGTCATTCCAGCCCC...AACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTGAAGACACCCGTGGCTaGGATTTCTTAAATCTCACT +
Preference number: 4 (lower is better)
Translates to: ACVCLLRVAAGLRATASCEDTRG*DFLNLT
Trigger: AGTGAGATTTAAGAAATCTCAGCCACGGGTGTCTTC...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTGTGTCAAAGGTAAACTaGAAACGTCGTGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ACVCLLRVAAGLRATASCVSKVN*KRRVCQ
Trigger: TTGGCAGACACGACGTTTTCAGTTTACCTTTGACAC...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GCTTTCGGCGCAGATGGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGCTGGCAGAAACCCTCTaGAATTCTGACGCCATCGAG +
Preference number: 4 (lower is better)
Translates to: AFGADGGHRQKPGATAELLAETL*NSDAIE
Trigger: CTCGATGGCGTCAGAATTGCAGAGGGTTTCTGCCAG...CAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp ACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTAGGCGCCAGCCACCGTaGCCAGCCTTCCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: TYRRLTEACGDGHQIPRVRRQPP*PAFLAF
Trigger: GAAAGCAAGGAAGGCTGGGCACGGTGGCTGGCGCCT...AACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GCTTTCGGCGCAGATGGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGAGACTCCTCTGGGGCTaGAATGACGTGAAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: AFGADGGHRQKPGATAELRLLWG*NDVKGK
Trigger: CTTACCCTTCACGTCATTCCAGCCCCAGAGGAGTCT...CAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CCAAACCTGGCCGCCCATCGGCCTGGCCTTCCCGGAGCAGGTGGCAACACGGAGGCTTTCCTGCAATTCTaGTGGTCTTTTTGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: PNLAAHRPGLPGAGGNTEAFLQF*WSFCCL
Trigger: GAGGCAACAAAAAGACCACCAGAATTGCAGGAAAGC...CTCCGTGTTGCCACCTGCTCCGGGAAGGCCAGGCCGATGGGCGGCCAGGTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCATCTGCCTCCTCCGGGTaGCCGCAGGTCTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QNTYRRLTEACGDGHQIPSASSG*PQVLGP
Trigger: TGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGA...TGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp AAGTATTCCAAAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGAGCCGAAGCCGCTaGTCCCAAACCTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: KYSKSPKHLSETHGSLRRRSRSR*SQTWPP
Trigger: GGGCGGCCAGGTTTGGGAGCAGCGGCTTCGGCTCCG...TCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTTTGGAATACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp ATTAGACCTAAGGCACTGGCAGAAACCCTCTGCAATTCTGACGCCATCGAGATCCGGAGCCGAAGCCGCTaGTCCCAAACCTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: IRPKALAETLCNSDAIEIRSRSR*SQTWPP
Trigger: GGGCGGCCAGGTTTGGGAGCAGCGGCTTCGGCTCCG...GATCTCGATGGCGTCAGAATTGCAGAGGGTTTCTGCCAGTGCCTTAGGTCTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGGAGGCTCACTATGTTaGCAGACCGGTCTCGAATTC +
Preference number: 4 (lower is better)
Translates to: RRLTEACGDGHQIPRVRGGGSLC*QTGLEF
Trigger: GAATTCGAGACCGGTCTGGCAACATAGTGAGCCTCC...GCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAACACAACACCCAGACCTaGCACGCAGCCGGTACTGTT +
Preference number: 4 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQHNTQT*HAAGTV
Trigger: AACAGTACCGGCTGCGTGGCAGGTCTGGGTGTTGTG...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAACGGCCTTGGGGTACTTaGGGTACACGATGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQRPWGT*GTRWWY
Trigger: GTACCACCATCGTGTACCCCAAGTACCCCAAGGCCG...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAAGCTCAGACCACGGGTaGACTGCAGGCCCCGTCCAC +
Preference number: 4 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGSSDHG*TAGPVH
Trigger: GTGGACGGGGCCTGCAGTCCACCCGTGGTCTGAGCT...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAACGAATCCACTGTGGATaGCGTCCTCTGACCCACCCT +
Preference number: 4 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQRIHCG*RPLTHP
Trigger: AGGGTGGGTCAGAGGACGCCATCCACAGTGGATTCG...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCTCTCGGAGTCGTACTTaGCCAAGGAGGTGTACCTTA +
Preference number: 4 (lower is better)
Translates to: RRLTEACGDGHQIPRVRGSRSRT*PRRCTL
Trigger: TAAGGTACACCTCCTTGGTCAAGTACGACTCCGAGA...GCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAGGGGCTGGAATGACGTaGAGGGTAAGGTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGGAGMT*RVRSPS
Trigger: GCTGGGCGACCTTACCCTTCACGTCATTCCAGCCCC...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGGGTGTCACTGTTTACTaGATTAGCACCACTTTTGTG +
Preference number: 4 (lower is better)
Translates to: SLGPSRASARQAQTTGGLGVTVY*ISTTFV
Trigger: CACAAAAGTGGTGCTAATTCAGTAAACAGTGACACC...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGACACCGCTTCCTGTCCTaGGTGTCCACTCCCCACGTG +
Preference number: 4 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGHRFLS*VSTPHV
Trigger: CACGTGGGGAGTGGACACTCAGGACAGGAAGCGGTG...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAACAGTTTCCAAGTAGCTaGGACTACAGGCGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQQFPSS*DYRRQP
Trigger: TGGCTGGCGCCTGTAGTCTCAGCTACTTGGAAACTG...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCTCTCCTAAGGACCTCTaGGAACACAGCGGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: RRLTEACGDGHQIPRVRGSPKDL*EHSGVQ
Trigger: TTGAACACCGCTGTGTTCTCAGAGGTCCTTAGGAGA...GCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTGTGGATGGCGTCCTCTaGCCCACCCTGAAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LACLVSGDGGTDFLSFATVDGVL*PTLKGS
Trigger: AGAACCCTTCAGGGTGGGTCAGAGGACGCCATCCAC...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGAGGCCCAGGGGCAGCTaGACGTCGTCGATGAAGTGC +
Preference number: 4 (lower is better)
Translates to: GLEDPANITYKLLGGRGGRPRGS*TSSMKC
Trigger: GCACTTCATCGACGACGTGCAGCTGCCCCTGGGCCT...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp ATTAGACCTAAGGCACTGGCAGAAACCCTCTGCAATTCTGACGCCATCGAGATCCAGAGAGGTCGTCGCTaGCCGGGAGCTCCGCGGCTT +
Preference number: 4 (lower is better)
Translates to: IRPKALAETLCNSDAIEIQRGRR*PGAPRL
Trigger: AAGCCGCGGAGCTCCCGGGCAGCGACGACCTCTCTG...GATCTCGATGGCGTCAGAATTGCAGAGGGTTTCTGCCAGTGCCTTAGGTCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCTTAGCACCACTTTTGTaGAGTGAAGACACCCGTGGC +
Preference number: 4 (lower is better)
Translates to: RRLTEACGDGHQIPRVRGLAPLL*SEDTRG
Trigger: GCCACGGGTGTCTTCACTGCACAAAAGTGGTGCTAA...GCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTAGACTCACGGAAGCCTaGGGAGACGGTCACCAGATA +
Preference number: 4 (lower is better)
Translates to: PAETVTRYQGFEAFLRACRLTEA*GDGHQI
Trigger: TATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCT...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTGAGCTGAGCTTACAGTaGTCGGTAACCCTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PAETVTRYQGFEAFLRACELSLQ*SVTLRH
Trigger: GTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTC...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTTGGTGTAGACGGCCTTaGGGTACTTGGGGTACACGA +
Preference number: 4 (lower is better)
Translates to: PAETVTRYQGFEAFLRACWCRRP*GTWGTR
Trigger: TCGTGTACCCCAAGTACCCCAAGGCCGTCTACACCA...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGTTCCTGCAATTCTGGTaGTCTTTTTGTTGCCTCATC +
Preference number: 4 (lower is better)
Translates to: SLGPSRASARQAQTTGGLFLQFW*SFCCLI
Trigger: GATGAGGCAACAAAAAGACCACCAGAATTGCAGGAA...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTTGCCAAACGCTATTCTaGTTTCCTAAGGTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: ACVCLLRVAAGLRATASCCQTLF*FPKVRN
Trigger: GTTTCTAACCTTAGGAAACCAGAATAGCGTTTGGCA...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCCATCGTTCCCTACTCTaGATGCACCTTAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RRLTEACGDGHQIPRVRGHRSLL*MHLSLS
Trigger: AGACAAGCTAAGGTGCATTCAGAGTAGGGAACGATG...GCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GAATTCACACGGTCCTTGGGGACATTTCAGTTGACTGTCACCTGCCTCCGTACGCCTCGGCCTTGTAGTTaGGCCACGTGCCATTGGGGA +
Preference number: 4 (lower is better)
Translates to: EFTRSLGTFQLTVTCLRTPRPCS*ATCHWG
Trigger: TCCCCAATGGCACGTGGCGCAACTACAAGGCCGAGG...CGTACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CTTTTTCCATGCTTTTCTTCTGACAAACTGACCACGGAGGGAGAGCTCTCCTCCACACAGGTGACCGTCTaGCTGCAGGAGGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: LFPCFSSDKLTTEGELSSTQVTV*LQEATA
Trigger: GGCGGTGGCCTCCTGCAGCCAGACGGTCACCTGTGT...GGAGGAGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp ACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTCCTTCCCGGAGCAGGTaGCAACACGGAGAACCTTTT +
Preference number: 4 (lower is better)
Translates to: TYRRLTEACGDGHQIPRVPSRSR*QHGEPF
Trigger: AAAAGGTTCTCCGTGTTGCCACCTGCTCCGGGAAGG...AACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGAAGACACCCGTGGCTaGGATTTCTTAAATCTCACT +
Preference number: 4 (lower is better)
Translates to: RRLTEACGDGHQIPRVRGEDTRG*DFLNLT
Trigger: AGTGAGATTTAAGAAATCTCAGCCACGGGTGTCTTC...GCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp GAATTCACACGGTCCTTGGGGACATTTCAGTTGACTGTCACCTGCCTCCGTACGGCCGGTACTGTTTCCTaGGCTCATCCGAGCAAGCGT +
Preference number: 4 (lower is better)
Translates to: EFTRSLGTFQLTVTCLRTAGTVS*AHPSKR
Trigger: ACGCTTGCTCGGATGAGCTCAGGAAACAGTACCGGC...CGTACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTTCTCCTAAGGACCTCTaGGAACACAGCGGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: PAETVTRYQGFEAFLRACSPKDL*EHSGVQ
Trigger: TTGAACACCGCTGTGTTCTCAGAGGTCCTTAGGAGA...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGAGGCCCAGGGGCAGCTaGACGTCGTCGATGAAGTGC +
Preference number: 4 (lower is better)
Translates to: RAELTVLGNPQALEIIWMRPRGS*TSSMKC
Trigger: GCACTTCATCGACGACGTGCAGCTGCCCCTGGGCCT...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTCCTATCCCAGACTGCTaGTGCTTTCCTGCAATTCTG +
Preference number: 4 (lower is better)
Translates to: PAETVTRYQGFEAFLRACPIPDC*CFPAIL
Trigger: CAGAATTGCAGGAAAGCAGCAGCAGTCTGGGATAGG...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGGTCATCGCCTGCGTCTaGCTCCTCCGGGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLVIACV*LLRVAA
Trigger: TGCGGCCACCCGGAGGAGGCAGACGCAGGCGATGAC...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp ATTAGACCTAAGGCACTGGCAGAAACCCTCTGCAATTCTGACGCCATCGAGATCAACCAGGTCATCGCCTaGGTCTGCCTCCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: IRPKALAETLCNSDAIEINQVIA*VCLLRV
Trigger: CACCCGGAGGAGGCAGACGCAGGCGATGACCTGGTT...GATCTCGATGGCGTCAGAATTGCAGAGGGTTTCTGCCAGTGCCTTAGGTCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CTTTTTCCATGCTTTTCTTCTGACAAACTGACCACGGAGGGAGAGCTCTCCTCCGACGGCGATTGTCGCTaGACCTGCTGCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFPCFSSDKLTTEGELSSDGDCR*TCCCGS
Trigger: GGAGCCACAGCAGCAGGTGCAGCGACAATCGCCGTC...GGAGGAGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGCTGGGAGGTGAAGGTTaGAGTGAGCTGAGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: GLEDPANITYKLLGGRGGLGGEG*SELSWR
Trigger: GCGCCAACTCAGCTCACTGCAACCTTCACCTCCCAG...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTTGGTGTAGACGGCCTTaGGGTACTTGGGGTACACGA +
Preference number: 4 (lower is better)
Translates to: LACLVSGDGGTDFLSFATWCRRP*GTWGTR
Trigger: TCGTGTACCCCAAGTACCCCAAGGCCGTCTACACCA...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTTTAAAAACAAAGGAATaGAACTCAACTCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: ACVCLLRVAAGLRATASCLKTKE*NSTLHR
Trigger: TCTGTGGAGAGTTGAGTTCCATTCCTTTGTTTTTAA...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CCAAACCTGGCCGCCCATCGGCCTGGCCTTCCCGGAGCAGGTGGCAACACGGAGTTAAAAACAAAGGAATaGAACTCAACTCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: PNLAAHRPGLPGAGGNTELKTKE*NSTLHR
Trigger: TCTGTGGAGAGTTGAGTTCCATTCCTTTGTTTTTAA...CTCCGTGTTGCCACCTGCTCCGGGAAGGCCAGGCCGATGGGCGGCCAGGTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGTCTGGTGTCGGGGGATaGGGGCACAGATTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLEDPANITYKLLGGRGGSGVGG*GHRFPQ
Trigger: CTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGA...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
3UTR CAA 72 bp ATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTGCTaGGAACTGACCGTCAGGAAGCAATCGGAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: IPRVRGVSQSLC*ELTVRKQSEPK
Trigger: CTTCGGCTCCGATTGCTTCCTGACGGTCAGTTCCAAGCACAGGCTCTGAGAAACGCCTCGAACCCTTGGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGGCTGCACGTCGTCGATaGAGTGCCTCTCGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: RAELTVLGNPQALEIIWMAARRR*SASRSR
Trigger: ACGACTCCGAGAGGCACTTCATCGACGACGTGCAGC...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAACCACTTTTGTGCAGTaGAGACACCCGTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QNTYRRLTEACGDGHQIPTTFVQ*RHPWLR
Trigger: TCTCAGCCACGGGTGTCTTCACTGCACAAAAGTGGT...TGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTGCCTTCCTTGCTTTCTaGATTAGACCTAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: PAETVTRYQGFEAFLRACAFLAF*IRPKAL
Trigger: CAGTGCCTTAGGTCTAATTCAGAAAGCAAGGAAGGC...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCATGGGGACATTTCAGTTaGCTGTCACCTGCCTCCGTA +
Preference number: 4 (lower is better)
Translates to: QNTYRRLTEACGDGHQIPWGHFS*LSPASV
Trigger: TACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCA...TGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTACGTCGTCGATGAAGTaGCTCTCGGAGTCGTACTTG +
Preference number: 4 (lower is better)
Translates to: LACLVSGDGGTDFLSFATTSSMK*LSESYL
Trigger: CAAGTACGACTCCGAGAGGCACTTCATCGACGACGT...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp ACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTATCCCAGACTGCTGCTaGTTTCCTGCAATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: TYRRLTEACGDGHQIPRVIPDCC*FPAILV
Trigger: CACCAGAATTGCAGGAAAGCAGCAGCAGTCTGGGAT...AACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGTCTGCCTCCTCCGGGTaGCCGCAGGTCTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLSASSG*PQVLGP
Trigger: TGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGA...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTACTGCACCTGCTGCTGTaGCTCCGGGGCACCGCGGGG +
Preference number: 4 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLLHLLL*LRGTAG
Trigger: CCCCGCGGTGCCCCGGAGCCACAGCAGCAGGTGCAG...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGAGCTCAGACCACGGGTaGACTGCAGGCCCCGTCCAC +
Preference number: 4 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLSSDHG*TAGPVH
Trigger: GTGGACGGGGCCTGCAGTCCACCCGTGGTCTGAGCT...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGATGCAGTGAGCTGAGTTaGCGCCATTCCACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGCSELS*RHSTQP
Trigger: AGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCA...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTGTTGCCTCATCTGATTaGGACTTTGGGGAAACAACA +
Preference number: 4 (lower is better)
Translates to: PAETVTRYQGFEAFLRACVASSD*DFGETT
Trigger: TGTTGTTTCCCCAAAGTCTCAATCAGATGAGGCAAC...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp ATTAGACCTAAGGCACTGGCAGAAACCCTCTGCAATTCTGACGCCATCGAGATCGCCTGTGCTTGGAACTaGCCGTCAGGAAGCAATCGG +
Preference number: 4 (lower is better)
Translates to: IRPKALAETLCNSDAIEIACAWN*PSGSNR
Trigger: CCGATTGCTTCCTGACGGTCAGTTCCAAGCACAGGC...GATCTCGATGGCGTCAGAATTGCAGAGGGTTTCTGCCAGTGCCTTAGGTCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CTTTTTCCATGCTTTTCTTCTGACAAACTGACCACGGAGGGAGAGCTCTCCTCCGCCTGTGCTTGGAACTaGCCGTCAGGAAGCAATCGG +
Preference number: 4 (lower is better)
Translates to: LFPCFSSDKLTTEGELSSACAWN*PSGSNR
Trigger: CCGATTGCTTCCTGACGGTCAGTTCCAAGCACAGGC...GGAGGAGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGATGGGGACATTTCAGTTaGCTGTCACCTGCCTCCGTA +
Preference number: 4 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGWGHFS*LSPASV
Trigger: TACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCA...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGGACGGCGATTGTCGCTaGACCTGCTGCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLDGDCR*TCCCGS
Trigger: GGAGCCACAGCAGCAGGTGCAGCGACAATCGCCGTC...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAAAAATGCTGCGTCACTTaGTCTTCCAAACACAGGAAG +
Preference number: 4 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQKCCVT*SSKHRK
Trigger: CTTCCTGTGTTTGGAAGAGCAAGTGACGCAGCATTT...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CTTTTTCCATGCTTTTCTTCTGACAAACTGACCACGGAGGGAGAGCTCTCCTCCCACAACACCCAGACCTaGCACGCAGCCGGTACTGTT +
Preference number: 4 (lower is better)
Translates to: LFPCFSSDKLTTEGELSSHNTQT*HAAGTV
Trigger: AACAGTACCGGCTGCGTGGCAGGTCTGGGTGTTGTG...GGAGGAGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp AAGTATTCCAAAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGCCTTGGGGTACTTaGGGTACACGATGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: KYSKSPKHLSETHGSLRRRPWGT*GTRWWY
Trigger: GTACCACCATCGTGTACCCCAAGTACCCCAAGGCCG...TCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTTTGGAATACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGTCTGGTGTCGGGGGATaGGGGCACAGATTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RAELTVLGNPQALEIIWMSGVGG*GHRFPQ
Trigger: CTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGA...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGAGCTTTCGGCGCAGATaGAGGCCATCGGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: RAELTVLGNPQALEIIWMSFRRR*RPSAET
Trigger: GGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGCT...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAAACACGAATCCACTGTaGATGGCGTCCTCTGACCCA +
Preference number: 4 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGNTNPL*MASSDP
Trigger: TGGGTCAGAGGACGCCATCCACAGTGGATTCGTGTT...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CTTTTTCCATGCTTTTCTTCTGACAAACTGACCACGGAGGGAGAGCTCTCCTCCCAGTTTCCAAGTAGCTaGGACTACAGGCGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LFPCFSSDKLTTEGELSSQFPSS*DYRRQP
Trigger: TGGCTGGCGCCTGTAGTCTCAGCTACTTGGAAACTG...GGAGGAGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CTTTTTCCATGCTTTTCTTCTGACAAACTGACCACGGAGGGAGAGCTCTCCTCCAAGGTTGCAGTGAGCTaGGTTGGCGCCATTCCACTC +
Preference number: 4 (lower is better)
Translates to: LFPCFSSDKLTTEGELSSKVAVS*VGAIPL
Trigger: GAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTT...GGAGGAGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp AAGTATTCCAAAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGAAAGGTTGCAGTGAGCTaGGTTGGCGCCATTCCACTC +
Preference number: 4 (lower is better)
Translates to: KYSKSPKHLSETHGSLRRKVAVS*VGAIPL
Trigger: GAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTT...TCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTTTGGAATACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGGTGGATGGCGTCCTCTaGCCCACCCTGAAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLVDGVL*PTLKGS
Trigger: AGAACCCTTCAGGGTGGGTCAGAGGACGCCATCCAC...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAATCCCAGACTGCTGCTaGTTTCCTGCAATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGIPDCC*FPAILV
Trigger: CACCAGAATTGCAGGAAAGCAGCAGCAGTCTGGGAT...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GAATTCACACGGTCCTTGGGGACATTTCAGTTGACTGTCACCTGCCTCCGTACGCTCCCTATCCCAGACTaGTGCTGCTTTCCTGCAATT +
Preference number: 4 (lower is better)
Translates to: EFTRSLGTFQLTVTCLRTLPIPD*CCFPAI
Trigger: AATTGCAGGAAAGCAGCAGCAGTCTGGGATAGGGAG...CGTACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGTTAGCACCACTTTTGTaGAGTGAAGACACCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GLEDPANITYKLLGGRGGLAPLL*SEDTRG
Trigger: GCCACGGGTGTCTTCACTGCACAAAAGTGGTGCTAA...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp AAGTATTCCAAAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGAAGACTCACGGAAGCCTaGGGAGACGGTCACCAGATA +
Preference number: 4 (lower is better)
Translates to: KYSKSPKHLSETHGSLRRRLTEA*GDGHQI
Trigger: TATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCT...TCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTTTGGAATACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAGTTCCCTACTCTGAATaGACCTTAGCTTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: QNTYRRLTEACGDGHQIPVPYSE*TLACLV
Trigger: CACCAGACAAGCTAAGGTGCATTCAGAGTAGGGAAC...TGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGTCCACAGGGCGTCGATaGATTGGGGCACAGCGGACT +
Preference number: 4 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLSTGRR*IGAQRT
Trigger: AGTCCGCTGTGCCCCAATGCATCGACGCCCTGTGGA...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GCTTTCGGCGCAGATGGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGTTTATCAATAAATGCTaGGTCACTTGCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: AFGADGGHRQKPGATAELFINKC*VTCSSK
Trigger: TTTGGAAGAGCAAGTGACGCAGCATTTATTGATAAA...CAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGCCTTCCCGGAGCAGGTaGCAACACGGAGAACCTTTT +
Preference number: 4 (lower is better)
Translates to: RAELTVLGNPQALEIIWMPSRSR*QHGEPF
Trigger: AAAAGGTTCTCCGTGTTGCCACCTGCTCCGGGAAGG...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GAATTCACACGGTCCTTGGGGACATTTCAGTTGACTGTCACCTGCCTCCGTACGTGTCCACTCCCCACGTaGACTCCCAAAAAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: EFTRSLGTFQLTVTCLRTCPLPT*TPKKCV
Trigger: AACACACTTTTTGGGAGTCCACGTGGGGAGTGGACA...CGTACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTAGGTCCACCCCGCTGCTaGGCCACGCCAGCCGAATTC +
Preference number: 4 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLGPPRC*ATPAEF
Trigger: GAATTCGGCTGGCGTGGCCCAGCAGCGGGGTGGACC...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGCACTGGAAATAATTTaGATGTGTTCAAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: RRLTEACGDGHQIPRVRGALEII*MCSRGI
Trigger: TATTCCCCTTGAACACATCCAAATTATTTCCAGTGC...GCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTAAGGGTGGCCCCTCCCTaGGTCCCAGCCGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLRVAPP*VPAELQ
Trigger: CTGAAGCTCGGCTGGGACCCAGGGAGGGGCCACCCT...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp ATTAGACCTAAGGCACTGGCAGAAACCCTCTGCAATTCTGACGCCATCGAGATCTGCAGTGAGCTGAGTTaGCGCCATTCCACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: IRPKALAETLCNSDAIEICSELS*RHSTQP
Trigger: AGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCA...GATCTCGATGGCGTCAGAATTGCAGAGGGTTTCTGCCAGTGCCTTAGGTCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTTGCTACTTACTTCACTaGCGTATTTCACACTCTCTA +
Preference number: 4 (lower is better)
Translates to: PAETVTRYQGFEAFLRACCYLLH*RISHSL
Trigger: TAGAGAGTGTGAAATACGTCAGTGAAGTAAGTAGCA...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CTTTTTCCATGCTTTTCTTCTGACAAACTGACCACGGAGGGAGAGCTCTCCTCCACGTCGTCGATGAAGTaGCTCTCGGAGTCGTACTTG +
Preference number: 4 (lower is better)
Translates to: LFPCFSSDKLTTEGELSSTSSMK*LSESYL
Trigger: CAAGTACGACTCCGAGAGGCACTTCATCGACGACGT...GGAGGAGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp AAGTATTCCAAAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGAGGAGGCTCACTATGTTaGCAGACCGGTCTCGAATTC +
Preference number: 4 (lower is better)
Translates to: KYSKSPKHLSETHGSLRRGGSLC*QTGLEF
Trigger: GAATTCGAGACCGGTCTGGCAACATAGTGAGCCTCC...TCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTTTGGAATACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CTTTTTCCATGCTTTTCTTCTGACAAACTGACCACGGAGGGAGAGCTCTCCTCCACTGATGCTGTTGTCTaGAGAGGACAGCGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LFPCFSSDKLTTEGELSSTDAVV*RGQRGS
Trigger: AGAGCCACGCTGTCCTCTGCAGACAACAGCATCAGT...GGAGGAGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGACTGATGCTGTTGTCTaGAGAGGACAGCGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RAELTVLGNPQALEIIWMTDAVV*RGQRGS
Trigger: AGAGCCACGCTGTCCTCTGCAGACAACAGCATCAGT...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGCGAATCCACTGTGGATaGCGTCCTCTGACCCACCCT +
Preference number: 4 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLRIHCG*RPLTHP
Trigger: AGGGTGGGTCAGAGGACGCCATCCACAGTGGATTCG...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGTCTCGGAGTCGTACTTaGCCAAGGAGGTGTACCTTA +
Preference number: 4 (lower is better)
Translates to: RAELTVLGNPQALEIIWMSRSRT*PRRCTL
Trigger: TAAGGTACACCTCCTTGGTCAAGTACGACTCCGAGA...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp AAGTATTCCAAAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACAACTCTCCACAGATTaGACCCACACAGGTGTCACT +
Preference number: 4 (lower is better)
Translates to: KYSKSPKHLSETHGSLRRQLSTD*THTGVT
Trigger: AGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTG...TCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTTTGGAATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTCTCCGTTTTGCCTTATaGAAAAATGGGAAAGTATTC +
Preference number: 4 (lower is better)
Translates to: PAETVTRYQGFEAFLRACLRFAL*KNGKVF
Trigger: GAATACTTTCCCATTTTTTCATAAGGCAAAACGGAG...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CTTTTTCCATGCTTTTCTTCTGACAAACTGACCACGGAGGGAGAGCTCTCCTCCAACCCTCTGCAATTCTaGCGCCATCGAGATCCTAAG +
Preference number: 4 (lower is better)
Translates to: LFPCFSSDKLTTEGELSSNPLQF*RHRDPK
Trigger: CTTAGGATCTCGATGGCGTCAGAATTGCAGAGGGTT...GGAGGAGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp AAGTATTCCAAAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGAAACCCTCTGCAATTCTaGCGCCATCGAGATCCTAAG +
Preference number: 4 (lower is better)
Translates to: KYSKSPKHLSETHGSLRRNPLQF*RHRDPK
Trigger: CTTAGGATCTCGATGGCGTCAGAATTGCAGAGGGTT...TCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTTTGGAATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CTTTTTCCATGCTTTTCTTCTGACAAACTGACCACGGAGGGAGAGCTCTCCTCCCCTATCCCAGACTGCTaGTGCTTTCCTGCAATTCTG +
Preference number: 4 (lower is better)
Translates to: LFPCFSSDKLTTEGELSSPIPDC*CFPAIL
Trigger: CAGAATTGCAGGAAAGCAGCAGCAGTCTGGGATAGG...GGAGGAGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTACAGGACTCCAGCGACTaGGCACGACGGCGATTGTCG +
Preference number: 4 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLQDSSD*ARRRLS
Trigger: CGACAATCGCCGTCGTGCGCAGTCGCTGGAGTCCTG...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAGCTTTCCTGCAATTCTaGTGGTCTTTTTGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGAFLQF*WSFCCL
Trigger: GAGGCAACAAAAAGACCACCAGAATTGCAGGAAAGC...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGACCACTTTTGTGCAGTaGAGACACCCGTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLTTFVQ*RHPWLR
Trigger: TCTCAGCCACGGGTGTCTTCACTGCACAAAAGTGGT...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGGGTGTCACTGTTTACTaGATTAGCACCACTTTTGTG +
Preference number: 4 (lower is better)
Translates to: GLEDPANITYKLLGGRGGGVTVY*ISTTFV
Trigger: CACAAAAGTGGTGCTAATTCAGTAAACAGTGACACC...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CTTTTTCCATGCTTTTCTTCTGACAAACTGACCACGGAGGGAGAGCTCTCCTCCGCCTTCCTTGCTTTCTaGATTAGACCTAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: LFPCFSSDKLTTEGELSSAFLAF*IRPKAL
Trigger: CAGTGCCTTAGGTCTAATTCAGAAAGCAAGGAAGGC...GGAGGAGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGCATCGTTCCCTACTCTaGATGCACCTTAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RAELTVLGNPQALEIIWMHRSLL*MHLSLS
Trigger: AGACAAGCTAAGGTGCATTCAGAGTAGGGAACGATG...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGCTGGCAGAAACCCTCTaGAATTCTGACGCCATCGAG +
Preference number: 4 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLLAETL*NSDAIE
Trigger: CTCGATGGCGTCAGAATTGCAGAGGGTTTCTGCCAG...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGTTCCTGCAATTCTGGTaGTCTTTTTGTTGCCTCATC +
Preference number: 4 (lower is better)
Translates to: GLEDPANITYKLLGGRGGFLQFW*SFCCLI
Trigger: GATGAGGCAACAAAAAGACCACCAGAATTGCAGGAA...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp ACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTGCACTGGAAATAATTTaGATGTGTTCAAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: TYRRLTEACGDGHQIPRVALEII*MCSRGI
Trigger: TATTCCCCTTGAACACATCCAAATTATTTCCAGTGC...AACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGTTTCTTCTGACAAACTaGCCACGGAGGGAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLFLLTN*PRRESS
Trigger: AGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAA...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGTCCATGCTTTTCTTCTaGCAAACTGACCACGGAGGG +
Preference number: 4 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLSMLFF*QTDHGG
Trigger: CCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGA...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCACTCCGTTTTGCCTTATaGAAAAATGGGAAAGTATTC +
Preference number: 4 (lower is better)
Translates to: QNTYRRLTEACGDGHQIPLRFAL*KNGKVF
Trigger: GAATACTTTCCCATTTTTTCATAAGGCAAAACGGAG...TGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTAGCCGGTACTGTTTCCTaGGCTCATCCGAGCAAGCGT +
Preference number: 4 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLAGTVS*AHPSKR
Trigger: ACGCTTGCTCGGATGAGCTCAGGAAACAGTACCGGC...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGATGCTACTTACTTCACTaGCGTATTTCACACTCTCTA +
Preference number: 4 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGCYLLH*RISHSL
Trigger: TAGAGAGTGTGAAATACGTCAGTGAAGTAAGTAGCA...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR TCA 90 bp CTTTTTCCATGCTTTTCTTCTGACAAACTGACCACGGAGGGAGAGCTCTCCTCCGTGTCAAAGGTAAACTaGAAACGTCGTGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LFPCFSSDKLTTEGELSSVSKVN*KRRVCQ
Trigger: TTGGCAGACACGACGTTTTCAGTTTACCTTTGACAC...GGAGGAGAGCTCTCCCTCCGTGGTCAGTTTGTCAGAAGAAAAGCATGGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTAAGCTTTCGGCGCAGATaGAGGCCATCGGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLSFRRR*RPSAET
Trigger: GGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGCT...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCATTTATCAATAAATGCTaGGTCACTTGCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QNTYRRLTEACGDGHQIPFINKC*VTCSSK
Trigger: TTTGGAAGAGCAAGTGACGCAGCATTTATTGATAAA...TGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGAAATGCTGCGTCACTTaGTCTTCCAAACACAGGAAG +
Preference number: 4 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLKCCVT*SSKHRK
Trigger: CTTCCTGTGTTTGGAAGAGCAAGTGACGCAGCATTT...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAATTTTTATCAATAAATaGTGCGTCACTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGIFINK*CVTCSS
Trigger: GGAAGAGCAAGTGACGCAGCATTTATTGATAAAAAT...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR GCA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGATTTTTATCAATAAATaGTGCGTCACTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GLEDPANITYKLLGGRGGIFINK*CVTCSS
Trigger: GGAAGAGCAAGTGACGCAGCATTTATTGATAAAAAT...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGTGCCAAACGCTATTCTaGTTTCCTAAGGTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: RAELTVLGNPQALEIIWMCQTLF*FPKVRN
Trigger: GTTTCTAACCTTAGGAAACCAGAATAGCGTTTGGCA...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CCA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTATTAGACCTAAGGCACTaGCAGAAACCCTCTGCAATT +
Preference number: 4 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLLDLRH*QKPSAI
Trigger: AATTGCAGAGGGTTTCTGCCAGTGCCTTAGGTCTAA...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS TCA 90 bp GCACCTCGGCCTTGTAGTTGCGCCACGTGCCATTGGGGACACAGGTaGCCGTCTGGCTGCAGGAGGCCACCGCCAGGCCCAGGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: APRPCSCATCHWGHR*PSGCRRPPPGPGAA
Trigger: AGCTGCCCCTGGGCCTGGCGGTGGCCTCCTGCAGCCAGACGGTCACCTGTGTCCCCAATGGCACGTGGCGCAACTACAAGGCCGAGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS GCA 90 bp GTGACCGTCTGGCTGCAGGAGGCCACCGCCAGGCCCAGGGGCAGCTaGACGTCGTCGATGAAGTGCCTCTCGGAGTCGTACTTGACCAAG +
Preference number: 5 (lower is better)
Translates to: VTVWLQEATARPRGS*TSSMKCLSESYLTK
Trigger: CTTGGTCAAGTACGACTCCGAGAGGCACTTCATCGACGACGTGCAGCTGCCCCTGGGCCTGGCGGTGGCCTCCTGCAGCCAGACGGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTCTCTCGGAGTCGTACTaGACCAAGGAGGTGTACCTT +
Preference number: 5 (lower is better)
Translates to: ACVCLLRVAAGLRATASCLSESY*TKEVYL
Trigger: AAGGTACACCTCCTTGGTCAAGTACGACTCCGAGAG...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS GCA 90 bp GAGGCCACCGCCAGGCCCAGGGGCAGCTGCACGTCGTCGATGAAGTaGCTCTCGGAGTCGTACTTGACCAAGGAGGTGTACCTTACTTCC +
Preference number: 5 (lower is better)
Translates to: EATARPRGSCTSSMK*LSESYLTKEVYLTS
Trigger: GGAAGTAAGGTACACCTCCTTGGTCAAGTACGACTCCGAGAGGCACTTCATCGACGACGTGCAGCTGCCCCTGGGCCTGGCGGTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp CAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAGTAAGGTCGCCCAGCTaGGCCAGGGCAGTCGGGGGC +
Preference number: 5 (lower is better)
Translates to: QNTYRRLTEACGDGHQIPVRSPS*ARAVGG
Trigger: GCCCCCGACTGCCCTGGCCAAGCTGGGCGACCTTAC...TGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp GCCTGCGTCTGCCTCCTCCGGGTGGCCGCAGGTCTTAGGGCCACCGCTTCCTGTTCAACTCTCCACAGATaGAACCCACACAGGTGTCAC +
Preference number: 5 (lower is better)
Translates to: ACVCLLRVAAGLRATASCSTLHR*NPHRCH
Trigger: GTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGA...ACAGGAAGCGGTGGCCCTAAGACCTGCGGCCACCCGGAGGAGGCAGACGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGTTGGGGACATTTCAGTaGACTGTCACCTGCCTCCGT +
Preference number: 5 (lower is better)
Translates to: SLGPSRASARQAQTTGGLLGTFQ*TVTCLR
Trigger: ACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAA...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp GCTTTCGGCGCAGATGGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGCTCTCGGAGTCGTACTaGACCAAGGAGGTGTACCTT +
Preference number: 5 (lower is better)
Translates to: AFGADGGHRQKPGATAELLSESY*TKEVYL
Trigger: AAGGTACACCTCCTTGGTCAAGTACGACTCCGAGAG...CAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp GCTTTCGGCGCAGATGGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGACCGGTCTCGAATTCTaGGGCTCAAGAGATCCTCCT +
Preference number: 5 (lower is better)
Translates to: AFGADGGHRQKPGATAELTGLEF*GSRDPP
Trigger: AGGAGGATCTCTTGAGCCCAAGAATTCGAGACCGGT...CAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp TCCCTGGGTCCCAGCCGAGCTTCAGCCCGGCAAGCTCAGACCACGGGTGGACTGGAATTCACACGGTCCTaGGGGACATTTCAGTTGACT +
Preference number: 5 (lower is better)
Translates to: SLGPSRASARQAQTTGGLEFTRS*GTFQLT
Trigger: AGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTC...CAGTCCACCCGTGGTCTGAGCTTGCCGGGCTGAAGCTCGGCTGGGACCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp CCAAACCTGGCCGCCCATCGGCCTGGCCTTCCCGGAGCAGGTGGCAACACGGAGCACACCCAGCATGATTaGTCTGAACTTAACACAGTC +
Preference number: 5 (lower is better)
Translates to: PNLAAHRPGLPGAGGNTEHTQHD*SELNTV
Trigger: GACTGTGTTAAGTTCAGACAAATCATGCTGGGTGTG...CTCCGTGTTGCCACCTGCTCCGGGAAGGCCAGGCCGATGGGCGGCCAGGTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp CAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCATTGCGCCACGTGCCATaGGGGACACAGGTGACCGTC +
Preference number: 5 (lower is better)
Translates to: QNTYRRLTEACGDGHQIPLRHVP*GTQVTV
Trigger: GACGGTCACCTGTGTCCCCAATGGCACGTGGCGCAA...TGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp AAGTATTCCAAAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGAGTAAGGTCGCCCAGCTaGGCCAGGGCAGTCGGGGGC +
Preference number: 5 (lower is better)
Translates to: KYSKSPKHLSETHGSLRRVRSPS*ARAVGG
Trigger: GCCCCCGACTGCCCTGGCCAAGCTGGGCGACCTTAC...TCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTTTGGAATACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp CGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCTTGGGGACATTTCAGTaGACTGTCACCTGCCTCCGT +
Preference number: 5 (lower is better)
Translates to: RRLTEACGDGHQIPRVRGLGTFQ*TVTCLR
Trigger: ACGGAGGCAGGTGACAGTCAACTGAAATGTCCCCAA...GCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp GCTTTCGGCGCAGATGGAGGCCATCGGCAGAAACCCGGAGCTACAGCCGAGCTGATAACTTACAAATTATaGGGAGGCCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: AFGADGGHRQKPGATAELITYKL*GGRGGW
Trigger: CCACCCGCCTCGGCCTCCCAATAATTTGTAAGTTAT...CAGCTCGGCTGTAGCTCCGGGTTTCTGCCGATGGCCTCCATCTGCGCCGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAATCTCAGAGCCTGTGCTaGGAACTGACCGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQSQSLC*ELTVRK
Trigger: CTTCCTGACGGTCAGTTCCAAGCACAGGCTCTGAGA...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp CGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCCGTGCCCAGCCTTCCTaGCTTTCTGAATTAGACCTA +
Preference number: 5 (lower is better)
Translates to: RRLTEACGDGHQIPRVRGRAQPS*LSELDL
Trigger: TAGGTCTAATTCAGAAAGCAAGGAAGGCTGGGCACG...GCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTCAAACACCACAGGGATaGGCAGGAGGTCCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: PAETVTRYQGFEAFLRACQTPQG*AGGPKK
Trigger: CTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTG...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGACAGGGCGTCGATGCATaGGGGCACAGCGGACTGATG +
Preference number: 5 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGQGVDA*GHSGLM
Trigger: CATCAGTCCGCTGTGCCCCAATGCATCGACGCCCTG...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTACGGCCTTGGGGTACTaGGGGTACACGATGGTGGTA +
Preference number: 5 (lower is better)
Translates to: LACLVSGDGGTDFLSFATTALGY*GYTMVV
Trigger: TACCACCATCGTGTACCCCAAGTACCCCAAGGCCGT...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp ACCTATCGGAGACTCACGGAAGCCTGCGGAGACGGTCACCAGATACCAAGGGTTCAAACACCACAGGGATaGGCAGGAGGTCCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: TYRRLTEACGDGHQIPRVQTPQG*AGGPKK
Trigger: CTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTG...AACCCTTGGTATCTGGTGACCGTCTCCGCAGGCTTCCGTGAGTCTCCGATAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGACGGCCTTGGGGTACTaGGGGTACACGATGGTGGTA +
Preference number: 5 (lower is better)
Translates to: GLEDPANITYKLLGGRGGTALGY*GYTMVV
Trigger: TACCACCATCGTGTACCCCAAGTACCCCAAGGCCGT...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp GGAGGTGAAGGTTGCAGTGAGCTGAGTTGGCGCCATTCCACTCAGCCTGGGCAATCAACTCTCCACAGATaGAACCCACACAGGTGTCAC +
Preference number: 5 (lower is better)
Translates to: GGEGCSELSWRHSTQPGQSTLHR*NPHRCH
Trigger: GTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGA...TTGCCCAGGCTGAGTGGAATGGCGCCAACTCAGCTCACTGCAACCTTCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGCACGGCGGCCAGGTTTaGACATCGTTCCCTACTCTG +
Preference number: 5 (lower is better)
Translates to: GLEDPANITYKLLGGRGGHGGQV*TSFPTL
Trigger: CAGAGTAGGGAACGATGTCAAAACCTGGCCGCCGTG...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTCTGGTGGTCTTTTTGTaGCCTCATCTGATTGAGACT +
Preference number: 5 (lower is better)
Translates to: PAETVTRYQGFEAFLRACLVVFL*PHLIET
Trigger: AGTCTCAATCAGATGAGGCAACAAAAAGACCACCAG...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGCACGGCGGCCAGGTTTaGACATCGTTCCCTACTCTG +
Preference number: 5 (lower is better)
Translates to: RAELTVLGNPQALEIIWMHGGQV*TSFPTL
Trigger: CAGAGTAGGGAACGATGTCAAAACCTGGCCGCCGTG...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp CCTGCGGAGACGGTCACCAGATACCAAGGGTTCGAGGCGTTTCTCAGAGCCTGTATTCTGGTGGTCTTTTaGTTGCCTCATCTGATTGAG +
Preference number: 5 (lower is better)
Translates to: PAETVTRYQGFEAFLRACILVVF*LPHLIE
Trigger: CTCAATCAGATGAGGCAACAAAAAGACCACCAGAAT...ACAGGCTCTGAGAAACGCCTCGAACCCTTGGTATCTGGTGACCGTCTCCGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp GGCCTTGAGGATCCCGCTAACATAACTTACAAATTATTGGGAGGCCGAGGCGGGATAACTTACAAATTATaGGGAGGCCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: GLEDPANITYKLLGGRGGITYKL*GGRGGW
Trigger: CCACCCGCCTCGGCCTCCCAATAATTTGTAAGTTAT...CCCGCCTCGGCCTCCCAATAATTTGTAAGTTATGTTAGCGGGATCCTCAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp TTAGCTTGTCTGGTGTCGGGGGATGGGGGCACAGATTTCCTCAGCTTTGCCACTTGTACCTTACTTCCTTaGGTGGTAAGGGGTCAAACT +
Preference number: 5 (lower is better)
Translates to: LACLVSGDGGTDFLSFATCTLLP*VVRGQT
Trigger: AGTTTGACCCCTTACCACCAAAGGAAGTAAGGTACA...AGTGGCAAAGCTGAGGAAATCTGTGCCCCCATCCCCCGACACCAGACAAGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp CTTTACTCAAACACCACAGGGATTGGCAGGAGGTCCCAAGAAGGGGTTAGGGGAGAATTCACACGGTCCTaGGGGACATTTCAGTTGACT +
Preference number: 5 (lower is better)
Translates to: LYSNTTGIGRRSQEGVRGEFTRS*GTFQLT
Trigger: AGTCAACTGAAATGTCCCCAAGGACCGTGTGAATTC...TCCCCTAACCCCTTCTTGGGACCTCCTGCCAATCCCTGTGGTGTTTGAGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp AAGTATTCCAAAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGACGTGCCCAGCCTTCCTaGCTTTCTGAATTAGACCTA +
Preference number: 5 (lower is better)
Translates to: KYSKSPKHLSETHGSLRRRAQPS*LSELDL
Trigger: TAGGTCTAATTCAGAAAGCAAGGAAGGCTGGGCACG...TCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTTTGGAATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTACAGGGCGTCGATGCATaGGGGCACAGCGGACTGATG +
Preference number: 5 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLQGVDA*GHSGLM
Trigger: CATCAGTCCGCTGTGCCCCAATGCATCGACGCCCTG...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGACCGGTCTCGAATTCTaGGGCTCAAGAGATCCTCCT +
Preference number: 5 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLTGLEF*GSRDPP
Trigger: AGGAGGATCTCTTGAGCCCAAGAATTCGAGACCGGT...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp CGAGCTGAGCTTACAGTGCTCGGTAACCCTCAGGCACTGGAAATAATTTGGATGCACACCCAGCATGATTaGTCTGAACTTAACACAGTC +
Preference number: 5 (lower is better)
Translates to: RAELTVLGNPQALEIIWMHTQHD*SELNTV
Trigger: GACTGTGTTAAGTTCAGACAAATCATGCTGGGTGTG...CATCCAAATTATTTCCAGTGCCTGAGGGTTACCGAGCACTGTAAGCTCAGCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp AAGTATTCCAAAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGAATTCTGGTGGTCTTTTaGTTGCCTCATCTGATTGAG +
Preference number: 5 (lower is better)
Translates to: KYSKSPKHLSETHGSLRRILVVF*LPHLIE
Trigger: CTCAATCAGATGAGGCAACAAAAAGACCACCAGAAT...TCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTTTGGAATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp AAGTATTCCAAAAGCCCAAAACACCTATCGGAGACTCACGGAAGCCTGCGGAGAGGCACTGGAAATAATTaGGATGTGTTCAAGGGGAAT +
Preference number: 5 (lower is better)
Translates to: KYSKSPKHLSETHGSLRRGTGNN*DVFKGN
Trigger: ATTCCCCTTGAACACATCCAAATTATTTCCAGTGCC...TCTCCGCAGGCTTCCGTGAGTCTCCGATAGGTGTTTTGGGCTTTTGGAATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGTGTACCTTACTTCCTTaGGTGGTAAGGGGTCAAACT +
Preference number: 5 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLCTLLP*VVRGQT
Trigger: AGTTTGACCCCTTACCACCAAAGGAAGTAAGGTACA...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp AACAAAGGAATGGAACTCAACTCTCCACAGATTGAACCCACACAGGTGTCACTGCTGGTGGTCTTTTTGTaGCCTCATCTGATTGAGACT +
Preference number: 5 (lower is better)
Translates to: NKGMELNSPQIEPTQVSLLVVFL*PHLIET
Trigger: AGTCTCAATCAGATGAGGCAACAAAAAGACCACCAG...CAGTGACACCTGTGTGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS-3UTR CAA 90 bp TTCACTGACGTATTTCACACTCTCTACACACCCAGCATGATTTGTCTGAACTTAGGCACTGGAAATAATTaGGATGTGTTCAAGGGGAAT +
Preference number: 5 (lower is better)
Translates to: FTDVFHTLYTPSMICLNLGTGNN*DVFKGN
Trigger: ATTCCCCTTGAACACATCCAAATTATTTCCAGTGCC...TAAGTTCAGACAAATCATGCTGGGTGTGTAGAGAGTGTGAAATACGTCAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS GCA 72 bp TGGCTGCAGGAGGCCACCGCCAGGCCCAGGGGCAGCTaGACGTCGTCGATGAAGTGCCTCTCGGAGTCGTAC +
Preference number: 6 (lower is better)
Translates to: WLQEATARPRGS*TSSMKCLSESY
Trigger: GTACGACTCCGAGAGGCACTTCATCGACGACGTGCAGCTGCCCCTGGGCCTGGCGGTGGCCTCCTGCAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS TCA 72 bp CCTTGTAGTTGCGCCACGTGCCATTGGGGACACAGGTaGCCGTCTGGCTGCAGGAGGCCACCGCCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: PCSCATCHWGHR*PSGCRRPPPGP
Trigger: TGGGCCTGGCGGTGGCCTCCTGCAGCCAGACGGTCACCTGTGTCCCCAATGGCACGTGGCGCAACTACAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS TCA 72 bp CGGCCTTGGGGTACTTGGGGTACACGATGGTGGTACTaGGGAAGCGGGTGGGCCTGTGGCGTGGCTCGAAGC +
Preference number: 6 (lower is better)
Translates to: RPWGTWGTRWWY*GSGWACGVARS
Trigger: GCTTCGAGCCACGCCACAGGCCCACCCGCTTCCTCAGTACCACCATCGTGTACCCCAAGTACCCCAAGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS GCA 72 bp GCCAGGCCCAGGGGCAGCTGCACGTCGTCGATGAAGTaGCTCTCGGAGTCGTACTTGACCAAGGAGGTGTAC +
Preference number: 6 (lower is better)
Translates to: ARPRGSCTSSMK*LSESYLTKEVY
Trigger: GTACACCTCCTTGGTCAAGTACGACTCCGAGAGGCACTTCATCGACGACGTGCAGCTGCCCCTGGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1
CDS CAA 72 bp TGCACGTCGTCGATGAAGTGCCTCTCGGAGTCGTACTaGACCAAGGAGGTGTACCTTACTTCCTTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: CTSSMKCLSESY*TKEVYLTSFGG
Trigger: ACCACCAAAGGAAGTAAGGTACACCTCCTTGGTCAAGTACGACTCCGAGAGGCACTTCATCGACGACGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329099.4
ENST00000640199.1