RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RFFL (Homo sapiens)

Ensembl gene IDs: ENSG00000092871

Ensembl transcript IDs: ENST00000315249.11, ENST00000394597.7, ENST00000413582.6, ENST00000414419.6, ENST00000415395.6, ENST00000447669.6, ENST00000581039.1, ENST00000581265.1, ENST00000582308.1, ENST00000584541.1, ENST00000584655.5

Found 888 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGACCCAGCCCCACTTGCCCTTATTGGTTGCTTACACCCAGAGTaGACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATC +
Preference number: 1 (lower is better)
Translates to: LDPAPLALIGCLHPE*TLTGKGLCWLQVII
Trigger: GATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCACTCTGGGTGTAAGCAACCAATAAGGGCAAGTGGGGCTGGGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR GCA 90 bp ACTGTCCTCTCCAACCTGGACCCAGCCCCACTTGCCCTTATTGGTTaGTTACACCCAGAGTGCACACTCACAGGAAAGGGCCTCTGCTGG +
Preference number: 1 (lower is better)
Translates to: TVLSNLDPAPLALIG*LHPECTLTGKGLCW
Trigger: CCAGCAGAGGCCCTTTCCTGTGAGTGTGCACTCTGGGTGTAAGCAACCAATAAGGGCAAGTGGGGCTGGGTCCAGGTTGGAGAGGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CCA 90 bp TGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCTGCTCCTTaGGCGCCTGGTCAGGGAGGTTTGTACAAGCCTGCGCACACACAG +
Preference number: 1 (lower is better)
Translates to: CSPRGCILSSLFPAP*APGQGGLYKPAHTQ
Trigger: CTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGACCAGGCGCCCAAGGAGCAGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CCA 90 bp AGGCACTGTCCTCTCCAACCTGGACCCAGCCCCACTTGCCCTTATTaGTTGCTTACACCCAGAGTGCACACTCACAGGAAAGGGCCTCTG +
Preference number: 1 (lower is better)
Translates to: RHCPLQPGPSPTCPY*LLTPRVHTHRKGPL
Trigger: CAGAGGCCCTTTCCTGTGAGTGTGCACTCTGGGTGTAAGCAACCAATAAGGGCAAGTGGGGCTGGGTCCAGGTTGGAGAGGACAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR GCA 90 bp CCTACCCGGGAGAAGGGCCTAACCTATGACTTTAGAACCCTCAGTTaGAGGTGTGCATGTTCCAGCCAACACTCCACTCTGAGTGCAGGC +
Preference number: 1 (lower is better)
Translates to: PTREKGLTYDFRTLS*RCACSSQHSTLSAG
Trigger: GCCTGCACTCAGAGTGGAGTGTTGGCTGGAACATGCACACCTGCAACTGAGGGTTCTAAAGTCATAGGTTAGGCCCTTCTCCCGGGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR GCA 90 bp CCTCAGTTGCAGGTGTGCATGTTCCAGCCAACACTCCACTCTGAGTaGAGGCTCATCAGGACACCATATGGTTGTAAACTGGCTGCCATG +
Preference number: 1 (lower is better)
Translates to: PQLQVCMFQPTLHSE*RLIRTPYGCKLAAM
Trigger: CATGGCAGCCAGTTTACAACCATATGGTGTCCTGATGAGCCTGCACTCAGAGTGGAGTGTTGGCTGGAACATGCACACCTGCAACTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CCA 90 bp TTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTaGCCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGG +
Preference number: 1 (lower is better)
Translates to: FGNPAIFLLACSSAS*PTLSPDTPGYFPVR
Trigger: CCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR CCA 90 bp GGAGGACTTCTGATTGATGAAACACATGGGCAAGCATCTCCCATATaGGGTGGGGATGGGTTGGGTACAGGAGGAGGGGTGAAACTGTCT +
Preference number: 1 (lower is better)
Translates to: GGLLIDETHGQASPI*GGDGLGTGGGVKLS
Trigger: AGACAGTTTCACCCCTCCTCCTGTACCCAACCCATCCCCACCCCATATGGGAGATGCTTGCCCATGTGTTTCATCAATCAGAAGTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR CCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTaGACCTATAAGATCAAGGACCACTGCGCCCCCTGGCCACCCCAC +
Preference number: 1 (lower is better)
Translates to: ALEGQFSPYEQINRL*TYKIKDHCAPWPPH
Trigger: GTGGGGTGGCCAGGGGGCGCAGTGGTCCTTGATCTTATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CCA 90 bp GGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTaGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGC +
Preference number: 1 (lower is better)
Translates to: GKTGMLRGDMASCLT*FWEPCNISTSLLLC
Trigger: GCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR CCA 90 bp ACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTaGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTG +
Preference number: 1 (lower is better)
Translates to: TGMLRGDMASCLTWF*EPCNISTSLLLCKL
Trigger: CAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR CCA 90 bp AACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTaGGCTTTGCCAGCCAAGAGGTACACCCCTGGGAAGACAGGCATG +
Preference number: 1 (lower is better)
Translates to: NQEHTHVIYTSSHWP*ALPAKRYTPGKTGM
Trigger: CATGCCTGTCTTCCCAGGGGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR CCA 90 bp TGCACGCACTATCCCTTGCAGACAGAAACAAATTTCCCAGCAGTTTaGGAGCCTGATGTTTTGTTGGCTCCCAGAGTCAGGTCAGGAGAC +
Preference number: 1 (lower is better)
Translates to: CTHYPLQTETNFPAV*EPDVLLAPRVRSGD
Trigger: GTCTCCTGACCTGACTCTGGGAGCCAACAAAACATCAGGCTCCCAAACTGCTGGGAAATTTGTTTCTGTCTGCAAGGGATAGTGCGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR CCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTaGCCTTGGGCTTTGCCAGCCAAGAGGTACACCCCTGGGAAGACA +
Preference number: 1 (lower is better)
Translates to: SLNQEHTHVIYTSSH*PWALPAKRYTPGKT
Trigger: TGTCTTCCCAGGGGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR CCA 90 bp AGACAGAAACAAATTTCCCAGCAGTTTGGGAGCCTGATGTTTTGTTaGCTCCCAGAGTCAGGTCAGGAGACCAACAGCTTCCAATCCCAG +
Preference number: 1 (lower is better)
Translates to: RQKQISQQFGSLMFC*LPESGQETNSFQSQ
Trigger: CTGGGATTGGAAGCTGTTGGTCTCCTGACCTGACTCTGGGAGCCAACAAAACATCAGGCTCCCAAACTGCTGGGAAATTTGTTTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR TCA 90 bp AGAGACCAGAAATTTAAATCCGAATGTGCTGGGGAGGAGGACTTCTaGTTGATGAAACACATGGGCAAGCATCTCCCATATGGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: RDQKFKSECAGEEDF*LMKHMGKHLPYGVG
Trigger: CCCCACCCCATATGGGAGATGCTTGCCCATGTGTTTCATCAATCAGAAGTCCTCCTCCCCAGCACATTCGGATTTAAATTTCTGGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR GCA 90 bp AGGATGGTGCAAATCAGGTCCCAAGAGAAGCAGCAGCAGGGATTATaGACGCACTATCCCTTGCAGACAGAAACAAATTTCCCAGCAGTT +
Preference number: 1 (lower is better)
Translates to: RMVQIRSQEKQQQGL*THYPLQTETNFPAV
Trigger: AACTGCTGGGAAATTTGTTTCTGTCTGCAAGGGATAGTGCGTGCATAATCCCTGCTGCTGCTTCTCTTGGGACCTGATTTGCACCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR TCA 90 bp AAAGTAGGGTCTCCTCACTCCCCACCAACCTGGGAAATAAAGACTTaGACTGTCGGCTTACAACAGAATCCAGTCTCATTCAGTACCTCC +
Preference number: 1 (lower is better)
Translates to: KVGSPHSPPTWEIKT*TVGLQQNPVSFSTS
Trigger: GGAGGTACTGAATGAGACTGGATTCTGTTGTAAGCCGACAGTTCAAGTCTTTATTTCCCAGGTTGGTGGGGAGTGAGGAGACCCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR CCA 90 bp GGTAATGGGAAAACACTCTGCTTTCCTGATCATGTGTTTTGTGCTTaGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTCCTCTA +
Preference number: 1 (lower is better)
Translates to: GNGKTLCFPDHVFCA*PRFCSKLLSPPAPL
Trigger: TAGAGGAGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAACACATGATCAGGAAAGCAGAGTGTTTTCCCATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR GCA 90 bp ACAACAGAATCCAGTCTCATTCAGTACCTCCTGAAAGCTCTTAAGTaGTCTGTCTTAACATTTGCTCTCCAGGAACTTCAACAGCAGTCT +
Preference number: 1 (lower is better)
Translates to: TTESSLIQYLLKALK*SVLTFALQELQQQS
Trigger: AGACTGCTGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAGGAGGTACTGAATGAGACTGGATTCTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR TCA 90 bp GAGGGGTTTACTTTCCTGACTCTAGCCCAGGACATTTGGTGTTTTTaGATAGGCACCATTCAGCCTTGCTTCAGTATTAGGAATAAGATA +
Preference number: 1 (lower is better)
Translates to: EGFTFLTLAQDIWCF*IGTIQPCFSIRNKI
Trigger: TATCTTATTCCTAATACTGAAGCAAGGCTGAATGGTGCCTATTCAAAAACACCAAATGTCCTGGGCTAGAGTCAGGAAAGTAAACCCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CCA 90 bp CTTGCTTCAGTATTAGGAATAAGATACTTTTTATTCCATCCTCTATaGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGA +
Preference number: 1 (lower is better)
Translates to: LASVLGIRYFLFHPL*RQKAAPPLSTDLHR
Trigger: TCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGGATGGAATAAAAAGTATCTTATTCCTAATACTGAAGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 90 bp CTCAGTAGTCTTTTCCCTGCTCCTTGGGCGCCTGGTCAGGGAGGTTaGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: LSSLFPAPWAPGQGG*YKPAHTQQSVTRLG
Trigger: GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGACCAGGCGCCCAAGGAGCAGGGAAAAGACTACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 90 bp CATCTTCATGAGCTCCTCTCGCTGAAAGGCTGTAGCTCGAAACCGTaGGCAGAGAAGGCAGAGGCGGGGCCCATTCCCTACTTGGCTCGA +
Preference number: 2 (lower is better)
Translates to: HLHELLSLKGCSSKP*AEKAEAGPIPYLAR
Trigger: TCGAGCCAAGTAGGGAATGGGCCCCGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTCATGAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581265.1
3UTR CAA 90 bp AAGGCACTGTCCTCTCCAACCTGGACCCAGCCCCACTTGCCCTTATaGGTTGCTTACACCCAGAGTGCACACTCACAGGAAAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: KALSSPTWTQPHLPL*VAYTQSAHSQERAS
Trigger: AGAGGCCCTTTCCTGTGAGTGTGCACTCTGGGTGTAAGCAACCAATAAGGGCAAGTGGGGCTGGGTCCAGGTTGGAGAGGACAGTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR TCA 90 bp TGCTTTCTCCCTGACCTGCCCCCAAAAATCAGTGGGCTAGGAAAGGGAATGAAACAAGCTGGCCAACCCTaGGCCCAGACACCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: CFLPDLPPKISGLGKGMKQAGQP*AQTPQA
Trigger: AGCCTGGGGTGTCTGGGCTCAGGGTTGGCCAGCTTG...TTTCATTCCCTTTCCTAGCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR-3UTR TCA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTGTGGTCTCGATCTCCTaGCCTCGTGATCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSVVSIS*PRDLPA
Trigger: GGCGGGCAGATCACGAGGTCAGGAGATCGAGACCAC...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR GCA 90 bp TTGGGTACAGGAGGAGGGGTGAAACTGTCTAGGTTCAGGGAGGAAGACAGGACCACTAGCTTGCTCCTCTaGAAGCTGGCCAACCCTGAG +
Preference number: 2 (lower is better)
Translates to: LGTGGGVKLSRFREEDRTTSLLL*KLANPE
Trigger: CTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGT...GGTCCTGTCTTCCTCCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CCA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTTGCTCCTCTGCAAGCTaGCCAACCCTGAGCCCAGAC +
Preference number: 2 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVCSSAS*PTLSPD
Trigger: GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCA...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 90 bp TCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTAGCTaGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACCCCAGG +
Preference number: 2 (lower is better)
Translates to: SCLTWFWEPCNISTS*LLCKLANPEPRHPR
Trigger: CCTGGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR TCA 90 bp CTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTGAAGCAAGCTGGCCAACCCTaGGCCCAGACACCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: LYYSCIQKVPCISQGNLKQAGQP*AQTPQA
Trigger: AGCCTGGGGTGTCTGGGCTCAGGGTTGGCCAGCTTG...CTTCAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR GCA 90 bp GTGACTACCACACTGGACAGTGCAGGTGTAGACGGAGTTCAGATCAGACTCCTGCTGGGAAGACAGGCATaGTCAGGGGTGACATGGCAT +
Preference number: 2 (lower is better)
Translates to: VTTTLDSAGVDGVQIRLLLGRQA*SGVTWH
Trigger: ATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAG...CAGGAGTCTGATCTGAACTCCGTCTACACCTGCACTGTCCAGTGTGGTAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 90 bp GAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTaGCCAGCCAAGAGGTACACCCCTGGGAAGACAGGCATGCTCAGG +
Preference number: 2 (lower is better)
Translates to: EHTHVIYTSSHWPWA*PAKRYTPGKTGMLR
Trigger: CCTGAGCATGCCTGTCTTCCCAGGGGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CCA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTTGCTCCTCTGCAAGCTaGCCAACCCTGAGCCCAGAC +
Preference number: 2 (lower is better)
Translates to: RGDMASCLTWFWEPCNISCSSAS*PTLSPD
Trigger: GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCA...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR TCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACAGGCATGCTCAGGGGTaGCATGGCATCTTGCTTGAC +
Preference number: 2 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYRHAQG*HGILLD
Trigger: GTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCT...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR TCA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTAGCAGTTTGGGAGCCTaGTGTTTTGTTGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVSSLGA*CFVGSQ
Trigger: CTGGGAGCCAACAAAACATCAGGCTCCCAAACTGCT...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR GCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACTAGCTTGCTCCTCTaGAAGCTGGCCAACCCTGAG +
Preference number: 2 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYTSLLL*KLANPE
Trigger: CTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGT...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp CCTATGACTTTAGAACCCTCAGTTGCAGGTGTGCATGTTCCAGCCAACACTCCAACAGGAAAGGGCCTCTaGTGGCTGCAGGTGATCATC +
Preference number: 2 (lower is better)
Translates to: PMTLEPSVAGVHVPANTPTGKGL*WLQVII
Trigger: GATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGT...TGGAGTGTTGGCTGGAACATGCACACCTGCAACTGAGGGTTCTAAAGTCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CCA 90 bp TTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTCCTCTACAAGCATCTCCCATATaGGGTGGGGATGGGTTGGGT +
Preference number: 2 (lower is better)
Translates to: FCAWPRFCSKLLSPPAPLQASPI*GGDGLG
Trigger: ACCCAACCCATCCCCACCCCATATGGGAGATGCTTG...TAGAGGAGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR-3UTR CCA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTGGGAGGGGTAAGGGGTaGGAGGTGTCTGCCAAGGCG +
Preference number: 2 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFGRGKG*EVSAKA
Trigger: CGCCTTGGCAGACACCTCCCACCCCTTACCCCTCCC...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 90 bp GAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTaGGGCTTTGCCAGCCAAGAGGTACACCCCTGGGAAGACAGGCAT +
Preference number: 2 (lower is better)
Translates to: EPRTYPCDLYKFPLA*GFASQEVHPWEDRH
Trigger: ATGCCTGTCTTCCCAGGGGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTAGGTTTGTACAAGCCTaGGCACACACAGCAGTCTGT +
Preference number: 2 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVRFVQA*AHTAVC
Trigger: ACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCT...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CCA 90 bp GGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCATGCTCCTCTGCAAGCTaGCCAACCCTGAGCCCAGAC +
Preference number: 2 (lower is better)
Translates to: GRQDPSSGKFSVHQLPSSCSSAS*PTLSPD
Trigger: GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCA...TGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CCA 90 bp CTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTGAAGCATATGGGGTGGGGATaGGTTGGGTACAGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: LYYSCIQKVPCISQGNLKHMGWG*VGYRRR
Trigger: CCTCCTCCTGTACCCAACCCATCCCCACCCCATATG...CTTCAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CCA 90 bp CATGTGTTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTACTTCAACAGCAGTCTaGCCAGAGAAGAGCACAGGC +
Preference number: 2 (lower is better)
Translates to: HVFCAWPRFCSKLLSPPATSTAV*PEKSTG
Trigger: GCCTGTGCTCTTCTCTGGCCAGACTGCTGTTGAAGT...AGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAACACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR CAA 90 bp AGGTCCCAAGAGAAGCAGCAGCAGGGATTATGCACGCACTATCCCTaGCAGACAGAAACAAATTTCCCAGCAGTTTGGGAGCCTGATGTT +
Preference number: 2 (lower is better)
Translates to: RSQEKQQQGLCTHYP*QTETNFPAVWEPDV
Trigger: AACATCAGGCTCCCAAACTGCTGGGAAATTTGTTTCTGTCTGCAAGGGATAGTGCGTGCATAATCCCTGCTGCTGCTTCTCTTGGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR CAA 90 bp AAGTTAGTTAGTTACAACAACACTGAGCATCTTGACCAAGGTCACTaGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACATCCCAGG +
Preference number: 2 (lower is better)
Translates to: KLVSYNNTEHLDQGH*AQPQANPRPCAHPR
Trigger: CCTGGGATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGATGCTCAGTGTTGTTGTAACTAACTAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR TCA 90 bp TTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTCCTCTAACATGGCATCTTGCTTaGCCTGGTTTTGGGAACCCT +
Preference number: 2 (lower is better)
Translates to: FCAWPRFCSKLLSPPAPLTWHLA*PGFGNP
Trigger: AGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGT...TAGAGGAGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR-3UTR GCA 90 bp ACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCACTAGCTTGCTCCTCTaGAAGCTGGCCAACCCTGAG +
Preference number: 2 (lower is better)
Translates to: TEPRTYPCDLYKFPLALGTSLLL*KLANPE
Trigger: CTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGT...GCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCTGGGAAGACAGGCATaGTCAGGGGTGACATGGCAT +
Preference number: 2 (lower is better)
Translates to: REEDRTQVLESSLFISYHLGRQA*SGVTWH
Trigger: ATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAG...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp CTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTGAAGGCTTTCTCCCTGACCTaGCCCCAAAAATCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: LYYSCIQKVPCISQGNLKAFSLT*PQKSVG
Trigger: GCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGC...CTTCAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CCA 90 bp GACTGTGAGGGCTCAAATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCAAGAGGTACACCCCTaGGAAGACAGGCATGCTCAG +
Preference number: 2 (lower is better)
Translates to: DCEGSNTSPTHCMVLPKEQEVHP*EDRHAQ
Trigger: CTGAGCATGCCTGTCTTCCCAGGGGTGTACCTCTTG...CTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATTTGAGCCCTCACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR-3UTR TCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGAGGCATGCTCAGGGGTaGCATGGCATCTTGCTTGAC +
Preference number: 2 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWRHAQG*HGILLD
Trigger: GTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCT...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR TCA 90 bp GTGACTACCACACTGGACAGTGCAGGTGTAGACGGAGTTCAGATCAGACTCCTGGGCCCAGTGTTCAGTTaGCTAGTTTATGCAGTTATT +
Preference number: 2 (lower is better)
Translates to: VTTTLDSAGVDGVQIRLLGPVFS*LVYAVI
Trigger: AATAACTGCATAAACTAGTCAACTGAACACTGGGCC...CAGGAGTCTGATCTGAACTCCGTCTACACCTGCACTGTCCAGTGTGGTAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CCA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGATGCTCCTCTGCAAGCTaGCCAACCCTGAGCCCAGAC +
Preference number: 2 (lower is better)
Translates to: ESSLFISYHHHSKITEPRCSSAS*PTLSPD
Trigger: GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCA...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CCA 90 bp TCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTGCTCCTCTGCAAGCTaGCCAACCCTGAGCCCAGAC +
Preference number: 2 (lower is better)
Translates to: SVTIITPRSLNQEHTHVICSSAS*PTLSPD
Trigger: GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCA...AATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CCA 90 bp GTGACTACCACACTGGACAGTGCAGGTGTAGACGGAGTTCAGATCAGACTCCTGCAACCCAATTGGTCTTaGGATTCATCCTTTACCTAC +
Preference number: 2 (lower is better)
Translates to: VTTTLDSAGVDGVQIRLLQPNWS*DSSFTY
Trigger: GTAGGTAAAGGATGAATCCCAAGACCAATTGGGTTG...CAGGAGTCTGATCTGAACTCCGTCTACACCTGCACTGTCCAGTGTGGTAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 90 bp GAAAGTAGGGTCTCCTCACTCCCCACCAACCTGGGAAATAAAGACTaGAACTGTCGGCTTACAACAGAATCCAGTCTCATTCAGTACCTC +
Preference number: 2 (lower is better)
Translates to: ESRVSSLPTNLGNKD*NCRLTTESSLIQYL
Trigger: GAGGTACTGAATGAGACTGGATTCTGTTGTAAGCCGACAGTTCAAGTCTTTATTTCCCAGGTTGGTGGGGAGTGAGGAGACCCTACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR-3UTR TCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTTTCCCTGTAAGGCACTaGAGAAACCGATGCAAGCTC +
Preference number: 2 (lower is better)
Translates to: GDMASCLTWFWEPCNISTFPVRH*RNRCKL
Trigger: GAGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAA...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR TCA 90 bp CTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTACATGGCATCTTGCTTaGCCTGGTTTTGGGAACCCT +
Preference number: 2 (lower is better)
Translates to: LNQEHTHVIYTSSHWPWATWHLA*PGFGNP
Trigger: AGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGT...AGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR TCA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATAGGCATGCTCAGGGGTaGCATGGCATCTTGCTTGAC +
Preference number: 2 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDRHAQG*HGILLD
Trigger: GTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCT...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR TCA 90 bp CCTATGACTTTAGAACCCTCAGTTGCAGGTGTGCATGTTCCAGCCAACACTCCATGCCATCCAGAGTCATaGTTGGTTCTAGTCTCAGAT +
Preference number: 2 (lower is better)
Translates to: PMTLEPSVAGVHVPANTPCHPES*LVLVSD
Trigger: ATCTGAGACTAGAACCAATCATGACTCTGGATGGCA...TGGAGTGTTGGCTGGAACATGCACACCTGCAACTGAGGGTTCTAAAGTCATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR GCA 90 bp CCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCAACTAGCTTGCTCCTCTaGAAGCTGGCCAACCCTGAG +
Preference number: 2 (lower is better)
Translates to: PKFWKVLCSSVTIITPRSTSLLL*KLANPE
Trigger: CTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGT...TGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACTGGCCTTGGGCTTTaGCAGCCAAGAGGTACACCC +
Preference number: 2 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHTGLGL*QPRGTP
Trigger: GGGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGT...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATACTGGCCTTGGGCTTTaGCAGCCAAGAGGTACACCC +
Preference number: 2 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDTGLGL*QPRGTP
Trigger: GGGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGT...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp CTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTGAAGGCTTGGCCACGCTTCTaGAGCAAACTCTTAAGTCCT +
Preference number: 2 (lower is better)
Translates to: LYYSCIQKVPCISQGNLKAWPRF*SKLLSP
Trigger: AGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGC...CTTCAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR GCA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTTCTGAACTCACTTGGTaGTTCAACCCAATTGGTCTT +
Preference number: 2 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSSELTW*FNPIGL
Trigger: AAGACCAATTGGGTTGAAGCACCAAGTGAGTTCAGA...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 90 bp CCATATGGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTaGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: PYGCKLAAMSQSFQL*RVSSHLMNKLTGSG
Trigger: TCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACCATATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR TCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATTTCCCTGTAAGGCACTaGAGAAACCGATGCAAGCTC +
Preference number: 2 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYFPVRH*RNRCKL
Trigger: GAGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAA...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR TCA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACAGGCATGCTCAGGGGTaGCATGGCATCTTGCTTGAC +
Preference number: 2 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNRHAQG*HGILLD
Trigger: GTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCT...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR TCA 90 bp TTCCCTACTTGGCTCGAACAGGTCATGCAAAAATTTTTCTTACAGTCCAAGCAGTTCTACTCGACATGCTaGATGTCTTCTGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: FPTWLEQVMQKFFLQSKQFYSTC*MSSGRG
Trigger: GCCCCTCCCAGAAGACATTCAGCATGTCGAGTAGAA...CTGCTTGGACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCCAAGTAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000581265.1
3UTR-3UTR GCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATGGTGACATGGCATCTTaGTTGACCTGGTTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: REEDRTQVLESSLFISYHGDMAS*LTWFWE
Trigger: TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp CTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTGAAGGGTGACATGGCATCTTaGTTGACCTGGTTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: LYYSCIQKVPCISQGNLKGDMAS*LTWFWE
Trigger: TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC...CTTCAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR GCA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTAACTGGCCTTGGGCTTTaGCAGCCAAGAGGTACACCC +
Preference number: 2 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLTGLGL*QPRGTP
Trigger: GGGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGT...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATGATTCCCCCAACTCCTaGAAAGGCTGTGGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYDSPNS*KGCGSE
Trigger: TTCTGAACCACAGCCTTTGCAGGAGTTGGGGGAATC...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR GCA 90 bp CTTCATGAGCTCCTCTCGCTGAAAGGCTGTAGCTCGAAACCGTTGGCAGAGAAGGGCTCGAACAGGTCATaGAAAAATTTTTCTTACAGT +
Preference number: 2 (lower is better)
Translates to: LHELLSLKGCSSKPLAEKGSNRS*KNFSYS
Trigger: ACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCC...CTTCTCTGCCAACGGTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTCATGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581265.1
3UTR-3UTR CCA 90 bp TTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTCCTCTATGCTTGACCTGGTTTTaGGAACCCTGCAATATTTCT +
Preference number: 2 (lower is better)
Translates to: FCAWPRFCSKLLSPPAPLCLTWF*EPCNIS
Trigger: AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCA...TAGAGGAGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR CAA 90 bp TGGGAGGTGTCTGCCAAGGCGTTTAGGGTTTGCATAGTTCATCCATaGGTAATGGGAAAACACTCTGCTTTCCTGATCATGTGTTTTGTG +
Preference number: 2 (lower is better)
Translates to: WEVSAKAFRVCIVHP*VMGKHSAFLIMCFV
Trigger: CACAAAACACATGATCAGGAAAGCAGAGTGTTTTCCCATTACCAATGGATGAACTATGCAAACCCTAAACGCCTTGGCAGACACCTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR CAA 90 bp CTCCTAAAGTGTGGAAATTATAGCATGAACCACTGTCAGGCTCTTTaGTCAGTCCTATCAACCTCTAACATCCTCGCACCAGACAGGACA +
Preference number: 2 (lower is better)
Translates to: LLKCGNYSMNHCQAL*SVLSTSNILAPDRT
Trigger: TGTCCTGTCTGGTGCGAGGATGTTAGAGGTTGATAGGACTGACAAAAGAGCCTGACAGTGGTTCATGCTATAATTTCCACACTTTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR TCA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGACATGGCATCTTGCTTaGCCTGGTTTTGGGAACCCT +
Preference number: 2 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALTWHLA*PGFGNP
Trigger: AGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGT...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR TCA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTAGGCATGCTCAGGGGTaGCATGGCATCTTGCTTGAC +
Preference number: 2 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFRHAQG*HGILLD
Trigger: GTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCT...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR-3UTR TCA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTGGCAGGAGAATAGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFGRRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCC...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR-3UTR GCA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTAACTAGCTTGCTCCTCTaGAAGCTGGCCAACCCTGAG +
Preference number: 2 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLTSLLL*KLANPE
Trigger: CTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGT...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp CTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTATATTTCTACTAGCTTaGTCCTCTGCAAGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LNQEHTHVIYTSSHWPWAIFLLA*SSASWP
Trigger: TGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATAT...AGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp CCTATGACTTTAGAACCCTCAGTTGCAGGTGTGCATGTTCCAGCCAACACTCCACTCTGTCTTAACATTTaGTCTCCAGGAACTTCAACA +
Preference number: 2 (lower is better)
Translates to: PMTLEPSVAGVHVPANTPLCLNI*SPGTST
Trigger: TGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG...TGGAGTGTTGGCTGGAACATGCACACCTGCAACTGAGGGTTCTAAAGTCATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CCA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATTATACAAGTTCCCACTaGCCTTGGGCTTTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHYTSSH*PWALPA
Trigger: GGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATA...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR TCA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTCCCTGTAAGGCACTaGAGAAACCGATGCAAGCTC +
Preference number: 2 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDFPVRH*RNRCKL
Trigger: GAGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAA...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR TCA 90 bp CACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCAACATGGCATCTTGCTTaGCCTGGTTTTGGGAACCCT +
Preference number: 2 (lower is better)
Translates to: HSKITEPRTYPCDLYKFPTWHLA*PGFGNP
Trigger: AGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGT...TGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR TCA 90 bp ATTCCCTACTTGGCTCGAACAGGTCATGCAAAAATTTTTCTTACAGTCCAAGCATCAAGGACCTGGGTTTaGATCCCGGCTCTGTCATTT +
Preference number: 2 (lower is better)
Translates to: IPYLARTGHAKIFLTVQASRTWV*IPALSF
Trigger: AAATGACAGAGCCGGGATTCAAACCCAGGTCCTTGA...TGCTTGGACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCCAAGTAGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581265.1
3UTR-3UTR GCA 90 bp TTTGGTCCAAAGAAACAAATGGATTTAGGCAATGTAGCAAGAGACTTTAGCAAAACTGGCCTTGGGCTTTaGCAGCCAAGAGGTACACCC +
Preference number: 2 (lower is better)
Translates to: FGPKKQMDLGNVARDFSKTGLGL*QPRGTP
Trigger: GGGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGT...TTTGCTAAAGTCTCTTGCTACATTGCCTAAATCCATTTGTTTCTTTGGACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR-3UTR CCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATTGCTTGACCTGGTTTTaGGAACCCTGCAATATTTCT +
Preference number: 2 (lower is better)
Translates to: REEDRTQVLESSLFISYHCLTWF*EPCNIS
Trigger: AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCA...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
3UTR CAA 90 bp CAGTGTAAATATCTGAACTCACTTGGTGCTTCAACCCAATTGGTCTaGGGATTCATCCTTTACCTACCCAGCTCTCATTCTCTTCTAGGT +
Preference number: 2 (lower is better)
Translates to: QCKYLNSLGASTQLV*GFILYLPSSHSLLG
Trigger: ACCTAGAAGAGAATGAGAGCTGGGTAGGTAAAGGATGAATCCCAAGACCAATTGGGTTGAAGCACCAAGTGAGTTCAGATATTTACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR GCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATTGGTTTTGGGAACCCTaGAATATTTCTACTAGCTTG +
Preference number: 2 (lower is better)
Translates to: REEDRTQVLESSLFISYHWFWEP*NISTSL
Trigger: CAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp TCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTGGTGACATGGCATCTTaGTTGACCTGGTTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: SVTIITPRSLNQEHTHVIGDMAS*LTWFWE
Trigger: TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC...AATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAGGTGACATGGCATCTTaGTTGACCTGGTTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: ESSLFISYHHHSKITEPRGDMAS*LTWFWE
Trigger: TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CCA 90 bp CAGTACCTCCTGAAAGCTCTTAAGTGCTCTGTCTTAACATTTGCTCTCCAGGAAACAGGACCCAAGTTCTaGAAAGTTCTCTGTTCATCA +
Preference number: 2 (lower is better)
Translates to: QYLLKALKCSVLTFALQETGPKF*KVLCSS
Trigger: TGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGT...TTCCTGGAGAGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAGGAGGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR CAA 90 bp CTAGATCAGTGTAAATATCTGAACTCACTTGGTGCTTCAACCCAATaGGTCTTGGGATTCATCCTTTACCTACCCAGCTCTCATTCTCTT +
Preference number: 2 (lower is better)
Translates to: LDQCKYLNSLGASTQ*VLGFILYLPSSHSL
Trigger: AAGAGAATGAGAGCTGGGTAGGTAAAGGATGAATCCCAAGACCAATTGGGTTGAAGCACCAAGTGAGTTCAGATATTTACACTGATCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR TCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATAAGAACATACCCATGTaGTTTATACAAGTTCCCACT +
Preference number: 2 (lower is better)
Translates to: REEDRTQVLESSLFISYHKNIPM*FIQVPT
Trigger: AGTGGGAACTTGTATAAATCACATGGGTATGTTCTT...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATATATTTCTACTAGCTTaGTCCTCTGCAAGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDIFLLA*SSASWP
Trigger: TGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATAT...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp TCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTATATTTCTACTAGCTTaGTCCTCTGCAAGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: SVTIITPRSLNQEHTHVIIFLLA*SSASWP
Trigger: TGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATAT...AATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATTGGTTTTGGGAACCCTaGAATATTTCTACTAGCTTG +
Preference number: 2 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYWFWEP*NISTSL
Trigger: CAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR GCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGTGGTTTTGGGAACCCTaGAATATTTCTACTAGCTTG +
Preference number: 2 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWWFWEP*NISTSL
Trigger: CAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTAGGTGACATGGCATCTTaGTTGACCTGGTTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLGDMAS*LTWFWE
Trigger: TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTATCCTCGATCCTTTATaGCCTTTTGGCAAGATTCCT +
Preference number: 2 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFILDPL*PFGKIP
Trigger: AGGAATCTTGCCAAAAGGGCATAAAGGATCGAGGAT...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR TCA 90 bp GAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACAAGAACATACCCATGTaGTTTATACAAGTTCCCACT +
Preference number: 2 (lower is better)
Translates to: EDRTQVLESSLFISYHHHKNIPM*FIQVPT
Trigger: AGTGGGAACTTGTATAAATCACATGGGTATGTTCTT...GTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR TCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATTATTCCAATGTATTATaGACCAGTCAGCTATCTGTC +
Preference number: 2 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYYSNVL*TSQLSV
Trigger: GACAGATAGCTGACTGGTTCATAATACATTGGAATA...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR GCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATAGAGCACAGGCTCTTTaGCTAAATCTATTTCTTCAA +
Preference number: 2 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYRAQAL*LNLFLQ
Trigger: TTGAAGAAATAGATTTAGGCAAAGAGCCTGTGCTCT...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR GCA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTAAGGCGTTTAGGGTTTaGATAGTTCATCCATTGGTA +
Preference number: 2 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFKAFRV*IVHPLV
Trigger: TACCAATGGATGAACTATGCAAACCCTAAACGCCTT...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CCA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACTGCTTGACCTGGTTTTaGGAACCCTGCAATATTTCT +
Preference number: 2 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNCLTWF*EPCNIS
Trigger: AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCA...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATATTTTCAGCGAAAAGTaGCTTAAGACTTCTAGTTGG +
Preference number: 2 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYIFSEK*LKTSSW
Trigger: CCAACTAGAAGTCTTAAGCCACTTTTCGCTGAAAAT...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR GCA 90 bp ATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTATATTTCTACTAGCTTaGTCCTCTGCAAGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: IITPRSLNQEHTHVIYTSIFLLA*SSASWP
Trigger: TGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATAT...ACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp CACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCATGGTTTTGGGAACCCTaGAATATTTCTACTAGCTTG +
Preference number: 2 (lower is better)
Translates to: HSKITEPRTYPCDLYKFPWFWEP*NISTSL
Trigger: CAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA...TGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR GCA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTCTTAGTGTGTGTTATTaGCATTTCAATGTCAGTGGT +
Preference number: 2 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFLSVCY*HFNVSG
Trigger: ACCACTGACATTGAAATGGCAATAACACACACTAAG...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR TCA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACAAGAACATACCCATGTaGTTTATACAAGTTCCCACT +
Preference number: 2 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNKNIPM*FIQVPT
Trigger: AGTGGGAACTTGTATAAATCACATGGGTATGTTCTT...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR GCA 72 bp TCCTTGGGCGCCTGGTCAGGGAGGTTTGTACAAGCCTaGGCACACACAGCAGTCTGTCACGAGGCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: SLGAWSGRFVQA*AHTAVCHEAGP
Trigger: TGGCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGACCAGGCGCCCAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR GCA 72 bp ACAGGGCAGCAGAACAAGGCTGTCTCCTCAGGATCCTaGCAAAGGCACTGTCCTCTCCAACCTGGACCCAGC +
Preference number: 3 (lower is better)
Translates to: TGQQNKAVSSGS*QRHCPLQPGPS
Trigger: GCTGGGTCCAGGTTGGAGAGGACAGTGCCTTTGGCAGGATCCTGAGGAGACAGCCTTGTTCTGCTGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CCA 72 bp AGGGGCTGCATTCTCAGTAGTCTTTTCCCTGCTCCTTaGGCGCCTGGTCAGGGAGGTTTGTACAAGCCTGCG +
Preference number: 3 (lower is better)
Translates to: RGCILSSLFPAP*APGQGGLYKPA
Trigger: CGCAGGCTTGTACAAACCTCCCTGACCAGGCGCCCAAGGAGCAGGGAAAAGACTACTGAGAATGCAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR GCA 72 bp TCCAACCTGGACCCAGCCCCACTTGCCCTTATTGGTTaGTTACACCCAGAGTGCACACTCACAGGAAAGGGC +
Preference number: 3 (lower is better)
Translates to: SNLDPAPLALIG*LHPECTLTGKG
Trigger: GCCCTTTCCTGTGAGTGTGCACTCTGGGTGTAAGCAACCAATAAGGGCAAGTGGGGCTGGGTCCAGGTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR GCA 72 bp AGGCACTGTCCTCTCCAACCTGGACCCAGCCCCACTTaGCCTTATTGGTTGCTTACACCCAGAGTGCACACT +
Preference number: 3 (lower is better)
Translates to: RHCPLQPGPSPT*PYWLLTPRVHT
Trigger: AGTGTGCACTCTGGGTGTAAGCAACCAATAAGGGCAAGTGGGGCTGGGTCCAGGTTGGAGAGGACAGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CCA 72 bp CTCAGGATCCTGCCAAAGGCACTGTCCTCTCCAACCTaGACCCAGCCCCACTTGCCCTTATTGGTTGCTTAC +
Preference number: 3 (lower is better)
Translates to: LRILPKALSSPT*TQPHLPLLVAY
Trigger: GTAAGCAACCAATAAGGGCAAGTGGGGCTGGGTCCAGGTTGGAGAGGACAGTGCCTTTGGCAGGATCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CAA 90 bp CTGAAAGGCTGTAGCTCGAAACCGTTGGCAGAGAAGGCAGAGGCGGGGCCCATTATCAAGGACCTGGGTTaGAATCCCGGCTCTGTCATT +
Preference number: 3 (lower is better)
Translates to: LKGCSSKPLAEKAEAGPIIKDLG*NPGSVI
Trigger: AATGACAGAGCCGGGATTCAAACCCAGGTCCTTGAT...AATGGGCCCCGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTACAGCCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581265.1
3UTR GCA 72 bp CCTGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTaGTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGAC +
Preference number: 3 (lower is better)
Translates to: PGFGNPAIFLLA*SSASWPTLSPD
Trigger: GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR GCA 72 bp CATAGTTATCTAGAGTTGGGAACGTCACTCCTGGTGTaGATGTCCAGACCCTACCCGGGAGAAGGGCCTAAC +
Preference number: 3 (lower is better)
Translates to: HSYLELGTSLLV*MSRPYPGEGPN
Trigger: GTTAGGCCCTTCTCCCGGGTAGGGTCTGGACATGCACACCAGGAGTGACGTTCCCAACTCTAGATAACTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CCA 72 bp CCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTaGCCAACCCTGAGCCCAGACACCCCAGGCTATTTC +
Preference number: 3 (lower is better)
Translates to: PAIFLLACSSAS*PTLSPDTPGYF
Trigger: GAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CAA 90 bp TTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTCCTCTAAAGTTCCCACTGGCCTaGGGCTTTGCCAGCCAAGAG +
Preference number: 3 (lower is better)
Translates to: FCAWPRFCSKLLSPPAPLKFPLA*GFASQE
Trigger: CTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTT...TAGAGGAGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR CCA 72 bp GTTACAACAACACTGAGCATCTTGACCAAGGTCACTTaGCCCAACCACAGGCTAATCCCAGGCCATGTGCAC +
Preference number: 3 (lower is better)
Translates to: VTTTLSILTKVT*PNHRLIPGHVH
Trigger: GTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGATGCTCAGTGTTGTTGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CAA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTGACATGGCATCTTGCTaGACCTGGTTTTGGGAACCC +
Preference number: 3 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVDMASC*TWFWEP
Trigger: GGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTC...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CAA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTCCACGTTTCGCCATGTaGTCCAGACTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVPRFAM*SRLVSN
Trigger: GTTTGAGACCAGTCTGGACAACATGGCGAAACGTGG...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CAA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACGACATGGCATCTTGCTaGACCTGGTTTTGGGAACCC +
Preference number: 3 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYDMASC*TWFWEP
Trigger: GGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTC...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR TCA 72 bp AAGTCCTTCACCTTCATCTTCATGAGCTCCTCTCGCTaGAAGGCTGTAGCTCGAAACCGTTGGCAGAGAAGG +
Preference number: 3 (lower is better)
Translates to: KSFTFIFMSSSR*KAVARNRWQRR
Trigger: CCTTCTCTGCCAACGGTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTCATGAAGATGAAGGTGAAGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581265.1
3UTR GCA 72 bp GGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTaGTTGACCTGGTTTTGGGAACCCTGCAATATTTCT +
Preference number: 3 (lower is better)
Translates to: GKTGMLRGDMAS*LTWFWEPCNIS
Trigger: AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR GCA 72 bp CAGGTGTGCATGTTCCAGCCAACACTCCACTCTGAGTaGAGGCTCATCAGGACACCATATGGTTGTAAACTG +
Preference number: 3 (lower is better)
Translates to: QVCMFQPTLHSE*RLIRTPYGCKL
Trigger: CAGTTTACAACCATATGGTGTCCTGATGAGCCTGCACTCAGAGTGGAGTGTTGGCTGGAACATGCACACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR GCA 72 bp GAGAAGGGCCTAACCTATGACTTTAGAACCCTCAGTTaGAGGTGTGCATGTTCCAGCCAACACTCCACTCTG +
Preference number: 3 (lower is better)
Translates to: EKGLTYDFRTLS*RCACSSQHSTL
Trigger: CAGAGTGGAGTGTTGGCTGGAACATGCACACCTGCAACTGAGGGTTCTAAAGTCATAGGTTAGGCCCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CAA 90 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAAAATATTTCTACTAGCTaGCTCCTCTGCAAGCTGGCC +
Preference number: 3 (lower is better)
Translates to: KTGMLRGDMASCLTWFWENISTS*LLCKLA
Trigger: GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATT...TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CAA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGCACTGGCCTTGGGCTTaGCCAGCCAAGAGGTACACC +
Preference number: 3 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVHWPWA*PAKRYT
Trigger: GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTG...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CAA 90 bp GTGACTACCACACTGGACAGTGCAGGTGTAGACGGAGTTCAGATCAGACTCCTGTGCACGCACTATCCCTaGCAGACAGAAACAAATTTC +
Preference number: 3 (lower is better)
Translates to: VTTTLDSAGVDGVQIRLLCTHYP*QTETNF
Trigger: GAAATTTGTTTCTGTCTGCAAGGGATAGTGCGTGCA...CAGGAGTCTGATCTGAACTCCGTCTACACCTGCACTGTCCAGTGTGGTAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CAA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTGGTGCTTCAACCCAATaGGTCTTGGGATTCATCCTT +
Preference number: 3 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSGASTQ*VLGFIL
Trigger: AAGGATGAATCCCAAGACCAATTGGGTTGAAGCACC...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR GCA 72 bp GCCAAAATTAAGGAGAAGGCCACTGCCTCCACCCATTaGTTCCCCTTTCCGCATAAACTAAGGATGGTGCAA +
Preference number: 3 (lower is better)
Translates to: AKIKEKATASTH*FPFPHKLRMVQ
Trigger: TTGCACCATCCTTAGTTTATGCGGAAAGGGGAAGCAATGGGTGGAGGCAGTGGCCTTCTCCTTAATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR GCA 72 bp TGGTCACATGTCACTAGTGACTACCACACTGGACAGTaGAGGTGTAGACGGAGTTCAGATCAGACTCCTGAA +
Preference number: 3 (lower is better)
Translates to: WSHVTSDYHTGQ*RCRRSSDQTPE
Trigger: TTCAGGAGTCTGATCTGAACTCCGTCTACACCTGCACTGTCCAGTGTGGTAGTCACTAGTGACATGTGACCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CCA 72 bp CTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTaGGAACCCTGCAATATTTCTACTAGCTTGCTCCTC +
Preference number: 3 (lower is better)
Translates to: LRGDMASCLTWF*EPCNISTSLLL
Trigger: GAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR CCA 72 bp GGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTaGTTTTGGGAACCCTGCAATATTTCTACTAGCTTG +
Preference number: 3 (lower is better)
Translates to: GMLRGDMASCLT*FWEPCNISTSL
Trigger: CAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR CCA 72 bp GGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTaGACCTATAAGATCAAGGACCACTGCGCCCCCTGG +
Preference number: 3 (lower is better)
Translates to: GQFSPYEQINRL*TYKIKDHCAPW
Trigger: CCAGGGGGCGCAGTGGTCCTTGATCTTATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CAA 90 bp CATGTGTTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTAATATTTCTACTAGCTaGCTCCTCTGCAAGCTGGCC +
Preference number: 3 (lower is better)
Translates to: HVFCAWPRFCSKLLSPPANISTS*LLCKLA
Trigger: GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATT...AGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAACACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR-3UTR CAA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCACTGGCCTTGGGCTTaGCCAGCCAAGAGGTACACC +
Preference number: 3 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNHWPWA*PAKRYT
Trigger: GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTG...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR TCA 72 bp AGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTaGCCTGGTTTTGGGAACCCTGCAATATTTCTACTA +
Preference number: 3 (lower is better)
Translates to: RQACSGVTWHLA*PGFGNPAIFLL
Trigger: TAGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR GCA 72 bp AAGGGGTGGGAGGTGTCTGCCAAGGCGTTTAGGGTTTaGATAGTTCATCCATTGGTAATGGGAAAACACTCT +
Preference number: 3 (lower is better)
Translates to: KGWEVSAKAFRV*IVHPLVMGKHS
Trigger: AGAGTGTTTTCCCATTACCAATGGATGAACTATGCAAACCCTAAACGCCTTGGCAGACACCTCCCACCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR CCA 72 bp TATCCCTTGCAGACAGAAACAAATTTCCCAGCAGTTTaGGAGCCTGATGTTTTGTTGGCTCCCAGAGTCAGG +
Preference number: 3 (lower is better)
Translates to: YPLQTETNFPAV*EPDVLLAPRVR
Trigger: CCTGACTCTGGGAGCCAACAAAACATCAGGCTCCCAAACTGCTGGGAAATTTGTTTCTGTCTGCAAGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR-3UTR CAA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAAAAGTTCCCACTGGCCTaGGGCTTTGCCAGCCAAGAG +
Preference number: 3 (lower is better)
Translates to: VLESSLFISYHHHSKITEKFPLA*GFASQE
Trigger: CTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTT...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CAA 90 bp CAGTACCTCCTGAAAGCTCTTAAGTGCTCTGTCTTAACATTTGCTCTCCAGGAAGAGCCTGATGTTTTGTaGGCTCCCAGAGTCAGGTCA +
Preference number: 3 (lower is better)
Translates to: QYLLKALKCSVLTFALQEEPDVL*APRVRS
Trigger: TGACCTGACTCTGGGAGCCAACAAAACATCAGGCTC...TTCCTGGAGAGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAGGAGGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR-3UTR CAA 90 bp CATTCCCTACTTGGCTCGAACAGGTCATGCAAAAATTTTTCTTACAGTCCAAGCCTTCTGGGAGGGGCTTaGGAATCAAGGACCTGGGTT +
Preference number: 3 (lower is better)
Translates to: HSLLGSNRSCKNFSYSPSLLGGA*ESRTWV
Trigger: AACCCAGGTCCTTGATTCCAAAGCCCCTCCCAGAAG...GCTTGGACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCCAAGTAGGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000581265.1
3UTR-3UTR CAA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGGACATGGCATCTTGCTaGACCTGGTTTTGGGAACCC +
Preference number: 3 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVDMASC*TWFWEP
Trigger: GGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTC...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CAA 90 bp CCTATGACTTTAGAACCCTCAGTTGCAGGTGTGCATGTTCCAGCCAACACTCCACATCCCAGGATTAGCTaGTGGTTTATCAGTTGTCAA +
Preference number: 3 (lower is better)
Translates to: PMTLEPSVAGVHVPANTPHPRIS*WFISCQ
Trigger: TTGACAACTGATAAACCACAAGCTAATCCTGGGATG...TGGAGTGTTGGCTGGAACATGCACACCTGCAACTGAGGGTTCTAAAGTCATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR TCA 72 bp TCTCCTCACTCCCCACCAACCTGGGAAATAAAGACTTaGACTGTCGGCTTACAACAGAATCCAGTCTCATTC +
Preference number: 3 (lower is better)
Translates to: SPHSPPTWEIKT*TVGLQQNPVSF
Trigger: GAATGAGACTGGATTCTGTTGTAAGCCGACAGTTCAAGTCTTTATTTCCCAGGTTGGTGGGGAGTGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR TCA 72 bp GTCCCTTTAGAGGTTTCCCTCTGCCATCCAGAGTCATaGTTGGTTCTAGTCTCAGATTTTTCAGCTGCATGG +
Preference number: 3 (lower is better)
Translates to: VPLEVSLCHPES*LVLVSDFSAAW
Trigger: CCATGCAGCTGAAAAATCTGAGACTAGAACCAATCATGACTCTGGATGGCAGAGGGAAACCTCTAAAGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR GCA 72 bp CAAATCAGGTCCCAAGAGAAGCAGCAGCAGGGATTATaGACGCACTATCCCTTGCAGACAGAAACAAATTTC +
Preference number: 3 (lower is better)
Translates to: QIRSQEKQQQGL*THYPLQTETNF
Trigger: GAAATTTGTTTCTGTCTGCAAGGGATAGTGCGTGCATAATCCCTGCTGCTGCTTCTCTTGGGACCTGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR GCA 72 bp CTCTGCTGGCTGCAGGTGATCATCTTGTCCCTTCTCTaGCTTAGTGTGTGTTATTGCCATTTCAATGTCAGT +
Preference number: 3 (lower is better)
Translates to: LCWLQVIILSLL*LSVCYCHFNVS
Trigger: ACTGACATTGAAATGGCAATAACACACACTAAGGCAGAGAAGGGACAAGATGATCACCTGCAGCCAGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CCA 72 bp AACTGTCATCTTCTACTCGACATGCTGAATGTCTTCTaGGAGGGGCTTTGGAATCAAGGACCTGGGTTTGAA +
Preference number: 3 (lower is better)
Translates to: NCHLLLDMLNVF*EGLWNQGPGFE
Trigger: TTCAAACCCAGGTCCTTGATTCCAAAGCCCCTCCCAGAAGACATTCAGCATGTCGAGTAGAAGATGACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581265.1
3UTR TCA 72 bp TCCAACCAAACTAGCCACAGACAGCTGCTGAGCAATTaGAATGAAGCTGGCACAACTAAGGAACTGAAGTTC +
Preference number: 3 (lower is better)
Translates to: SNQTSHRQLLSN*NEAGTTKELKF
Trigger: GAACTTCAGTTCCTTAGTTGTGCCAGCTTCATTTCAATTGCTCAGCAGCTGTCTGTGGCTAGTTTGGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR-3UTR CAA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTAATGTGAGCAAAGTGTaGTGGCTCATCCTCGATCCT +
Preference number: 3 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFNVSKV*WLILDP
Trigger: AGGATCGAGGATGAGCCACAACACTTTGCTCACATT...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR TCA 72 bp ACTTTCCTGACTCTAGCCCAGGACATTTGGTGTTTTTaGATAGGCACCATTCAGCCTTGCTTCAGTATTAGG +
Preference number: 3 (lower is better)
Translates to: TFLTLAQDIWCF*IGTIQPCFSIR
Trigger: CCTAATACTGAAGCAAGGCTGAATGGTGCCTATTCAAAAACACCAAATGTCCTGGGCTAGAGTCAGGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CCA 72 bp ACTGTGAGGGCTCAAATACATCACCTACTCATTGCATaGTCCTTCCTAAAGAGCCTAGAAAATGGTTTCTCC +
Preference number: 3 (lower is better)
Translates to: TVRAQIHHLLIA*SFLKSLENGFS
Trigger: GGAGAAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATTTGAGCCCTCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR-3UTR CAA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAAATATTTCTACTAGCTaGCTCCTCTGCAAGCTGGCC +
Preference number: 3 (lower is better)
Translates to: ESSLFISYHHHSKITEPRNISTS*LLCKLA
Trigger: GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATT...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CAA 90 bp TCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTAATATTTCTACTAGCTaGCTCCTCTGCAAGCTGGCC +
Preference number: 3 (lower is better)
Translates to: SVTIITPRSLNQEHTHVINISTS*LLCKLA
Trigger: GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATT...AATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CAA 90 bp ATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTGACATGGCATCTTGCTaGACCTGGTTTTGGGAACCC +
Preference number: 3 (lower is better)
Translates to: IITPRSLNQEHTHVIYTSDMASC*TWFWEP
Trigger: GGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTC...ACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR TCA 72 bp AAATTTAAATCCGAATGTGCTGGGGAGGAGGACTTCTaGTTGATGAAACACATGGGCAAGCATCTCCCATAT +
Preference number: 3 (lower is better)
Translates to: KFKSECAGEEDF*LMKHMGKHLPY
Trigger: ATATGGGAGATGCTTGCCCATGTGTTTCATCAATCAGAAGTCCTCCTCCCCAGCACATTCGGATTTAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR GCA 72 bp TCCAGTCTCATTCAGTACCTCCTGAAAGCTCTTAAGTaGTCTGTCTTAACATTTGCTCTCCAGGAACTTCAA +
Preference number: 3 (lower is better)
Translates to: SSLIQYLLKALK*SVLTFALQELQ
Trigger: TTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAGGAGGTACTGAATGAGACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR-3UTR CAA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTGCTTGACCTGGTTTaGGGAACCCTGCAATATTTC +
Preference number: 3 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDLLDLV*GTLQYF
Trigger: GAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAA...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR-3UTR CAA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATAACTGGAATGGGATCTaGGAACTCCCAACTTTAATT +
Preference number: 3 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYNWNGI*ELPTLI
Trigger: AATTAAAGTTGGGAGTTCCAAGATCCCATTCCAGTT...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCGGCTCCCTGGGGTGGTaGGACCTCCTCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GMLRGDMASCLTWFWEPCGSLGW*DLLRLS
Trigger: GGACAGCCTGAGGAGGTCCCACCACCCCAGGGAGCC...GCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGCCTGGCTCCCTGGGGTaGTGGGACCTCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLPGSLG*WDLLRL
Trigger: CAGCCTGAGGAGGTCCCACCACCCCAGGGAGCCAGG...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TTGGGTACAGGAGGAGGGGTGAAACTGTCTAGGTTCAGGGAGGAAGACAGGACCCCTGGCTCCCTGGGGTaGTGGGACCTCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGTGGGVKLSRFREEDRTPGSLG*WDLLRL
Trigger: CAGCCTGAGGAGGTCCCACCACCCCAGGGAGCCAGG...GGTCCTGTCTTCCTCCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
3UTR CAA 72 bp GAGCTCCTCTCGCTGAAAGGCTGTAGCTCGAAACCGTaGGCAGAGAAGGCAGAGGCGGGGCCCATTCCCTAC +
Preference number: 4 (lower is better)
Translates to: ELLSLKGCSSKP*AEKAEAGPIPY
Trigger: GTAGGGAATGGGCCCCGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR TCA 90 bp GCCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACAAGCTGGCCAACCCTaGGCCCAGACACCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ANPEPRHPRLFPCKALKKQAGQP*AQTPQA
Trigger: AGCCTGGGGTGTCTGGGCTCAGGGTTGGCCAGCTTG...TTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTGGCTCCCTGGGGTGGTaGGACCTCCTCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAGSLGW*DLLRLS
Trigger: GGACAGCCTGAGGAGGTCCCACCACCCCAGGGAGCC...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACCCTGGCTCCCTGGGGTaGTGGGACCTCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDPGSLG*WDLLRL
Trigger: CAGCCTGAGGAGGTCCCACCACCCCAGGGAGCCAGG...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAACCTGGCTCCCTGGGGTaGTGGGACCTCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQPGSLG*WDLLRL
Trigger: CAGCCTGAGGAGGTCCCACCACCCCAGGGAGCCAGG...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CTTCATGAGCTCCTCTCGCTGAAAGGCTGTAGCTCGAAACCGTTGGCAGAGAAGCCTGGCTCCCTGGGGTaGTGGGACCTCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LHELLSLKGCSSKPLAEKPGSLG*WDLLRL
Trigger: CAGCCTGAGGAGGTCCCACCACCCCAGGGAGCCAGG...CTTCTCTGCCAACGGTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTCATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581265.1
3UTR CAA 72 bp CTTTTCCCTGCTCCTTGGGCGCCTGGTCAGGGAGGTTaGTACAAGCCTGCGCACACACAGCAGTCTGTCACG +
Preference number: 4 (lower is better)
Translates to: LFPAPWAPGQGG*YKPAHTQQSVT
Trigger: CGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGACCAGGCGCCCAAGGAGCAGGGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp ATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACCCCCTCCTGAACCTGGGCTaGGGGAACAGAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ISTSLLLCKLANPEPRHPLLNLG*GNRGGL
Trigger: CAAGCCACCTCTGTTCCCCCAGCCCAGGTTCAGGAG...GGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp ATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACCCCGTTCTCCTCCAAGCCTaGTGGTACTGCTCCCCCGTT +
Preference number: 4 (lower is better)
Translates to: ISTSLLLCKLANPEPRHPVLLQA*WYCSPV
Trigger: AACGGGGGAGCAGTACCATCAGGCTTGGAGGAGAAC...GGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR TCA 90 bp GGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCGTTCTCCTCCAAGCCTaGTGGTACTGCTCCCCCGTT +
Preference number: 4 (lower is better)
Translates to: GMLRGDMASCLTWFWEPCVLLQA*WYCSPV
Trigger: AACGGGGGAGCAGTACCATCAGGCTTGGAGGAGAAC...GCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR TCA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTCAAGCTGGCCAACCCTaGGCCCAGACACCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVQAGQP*AQTPQA
Trigger: AGCCTGGGGTGTCTGGGCTCAGGGTTGGCCAGCTTG...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCTGGGTCAGGAAGGCCTaGTGCTCAGGAAAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GMLRGDMASCLTWFWEPCWVRKA*CSGKSG
Trigger: CCCAGACTTTCCTGAGCAGCAGGCCTTCCTGACCCA...GCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACCCTGGCTCCCTGGGGTaGTGGGACCTCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYPGSLG*WDLLRL
Trigger: CAGCCTGAGGAGGTCCCACCACCCCAGGGAGCCAGG...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GCTGTAGCTCGAAACCGTTGGCAGAGAAGGCAGAGGCGGGGCCCATTCCCTACTGGCCCATTCCCTACTTaGCTCGAACAGGTCATGCAA +
Preference number: 4 (lower is better)
Translates to: AVARNRWQRRQRRGPFPTGPFPT*LEQVMQ
Trigger: TTGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCC...AGTAGGGAATGGGCCCCGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR CCA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGGTAGCTCGAAACCGTTaGCAGAGAAGGCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLVARNR*QRRQRR
Trigger: CCGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTAC...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCACTGCTCCCCCGTTTTaGTCTTCGGCACCACTGACC +
Preference number: 4 (lower is better)
Translates to: GMLRGDMASCLTWFWEPCTAPPF*SSAPLT
Trigger: GGTCAGTGGTGCCGAAGACCAAAACGGGGGAGCAGT...GCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp ATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACCCCCATATGGGGTGGGGATaGGTTGGGTACAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ISTSLLLCKLANPEPRHPHMGWG*VGYRRR
Trigger: CCTCCTCCTGTACCCAACCCATCCCCACCCCATATG...GGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp GTGACTACCACACTGGACAGTGCAGGTGTAGACGGAGTTCAGATCAGACTCCTGCTGTCCTCTCCAACCTaGACCCAGCCCCACTTGCCC +
Preference number: 4 (lower is better)
Translates to: VTTTLDSAGVDGVQIRLLLSSPT*TQPHLP
Trigger: GGGCAAGTGGGGCTGGGTCCAGGTTGGAGAGGACAG...CAGGAGTCTGATCTGAACTCCGTCTACACCTGCACTGTCCAGTGTGGTAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp TGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGAGTGGTCTCGATCTCCTaGCCTCGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: CNISTSLLLCKLANPEPRVVSIS*PRDLPA
Trigger: GGCGGGCAGATCACGAGGTCAGGAGATCGAGACCAC...TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp ATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACCCCCTTCCTGGCCGTGTTTaGAAAGTGAGCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: ISTSLLLCKLANPEPRHPLPGRV*KVSPTG
Trigger: TCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAG...GGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGCTGGGAAGACAGGCATaGTCAGGGGTGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLLGRQA*SGVTWH
Trigger: ATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAG...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGGCAATCTCAGCTCACTaGAACCTCTGCTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLAISAH*NLCFPG
Trigger: ACCCGGGAAGCAGAGGTTGCAGTGAGCTGAGATTGC...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp TTGGGTACAGGAGGAGGGGTGAAACTGTCTAGGTTCAGGGAGGAAGACAGGACCACGTCACTCCTGGTGTaGATGTCCAGACCCTACCCG +
Preference number: 4 (lower is better)
Translates to: LGTGGGVKLSRFREEDRTTSLLV*MSRPYP
Trigger: CGGGTAGGGTCTGGACATGCACACCAGGAGTGACGT...GGTCCTGTCTTCCTCCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp TTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACGGCTCCCTGGGGTGGTaGGACCTCCTCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FWEPCNISTSLLLCKLANGSLGW*DLLRLS
Trigger: GGACAGCCTGAGGAGGTCCCACCACCCCAGGGAGCC...GTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTCTCCTGAACCTGGGCTaGGGGAACAGAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQALLNLG*GNRGGL
Trigger: CAAGCCACCTCTGTTCCCCCAGCCCAGGTTCAGGAG...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp ATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACCCCCAAGAGGTACACCCCTaGGAAGACAGGCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: ISTSLLLCKLANPEPRHPQEVHP*EDRHAQ
Trigger: CTGAGCATGCCTGTCTTCCCAGGGGTGTACCTCTTG...GGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACGGGAGGGGTAAGGGGTaGGAGGTGTCTGCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYGRGKG*EVSAKA
Trigger: CGCCTTGGCAGACACCTCCCACCCCTTACCCCTCCC...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTCAGGCCGGACTGCAGTaGCGCAATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAQAGLQ*RNLGSL
Trigger: CAGTGAGCCAAGATTGCGCCACTGCAGTCCGGCCTG...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGCTGGTCTCAAACTCCTaGCCTCGAGTCATCCACGCA +
Preference number: 4 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLLVSNS*PRVIHA
Trigger: TGCGTGGATGACTCGAGGCCAGGAGTTTGAGACCAG...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 72 bp AAGGCACTGTCCTCTCCAACCTGGACCCAGCCCCACTaGCCCTTATTGGTTGCTTACACCCAGAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: KALSSPTWTQPH*PLLVAYTQSAH
Trigger: GTGTGCACTCTGGGTGTAAGCAACCAATAAGGGCAAGTGGGGCTGGGTCCAGGTTGGAGAGGACAGTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTGCCGTGTTTGCAAAGTaGGCCCCACAGGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAAVFAK*APQDLQ
Trigger: CTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGGC...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGAGCCCCACAGGACTTaGAGCTTGGTTCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQEPHRT*SLVPSL
Trigger: CAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTC...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAATGGGTCAGGAAGGCCTaGTGCTCAGGAAAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQWVRKA*CSGKSG
Trigger: CCCAGACTTTCCTGAGCAGCAGGCCTTCCTGACCCA...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GCCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAAACTAGCTTGCTCCTCTaGAAGCTGGCCAACCCTGAG +
Preference number: 4 (lower is better)
Translates to: ANPEPRHPRLFPCKALKKTSLLL*KLANPE
Trigger: CTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGT...TTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTCCTGGCTCCCTGGGGTaGTGGGACCTCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LNQEHTHVIYTSSHWPWAPGSLG*WDLLRL
Trigger: CAGCCTGAGGAGGTCCCACCACCCCAGGGAGCCAGG...AGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGTGGTTCCAAGCCTGTTaGGGAAGGGAAGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLWFQAC*GREGAV
Trigger: TACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCA...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCACAGGACTTGCAGCTTaGTTCCAAGCCTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GMLRGDMASCLTWFWEPCTGLAA*FQACWG
Trigger: TCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGT...GCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp ATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACCCCGGCCCATTCCCTACTTaGCTCGAACAGGTCATGCAA +
Preference number: 4 (lower is better)
Translates to: ISTSLLLCKLANPEPRHPGPFPT*LEQVMQ
Trigger: TTGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCC...GGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGTAGCTCGAAACCGTTaGCAGAGAAGGCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQVARNR*QRRQRR
Trigger: CCGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTAC...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTAGTCTGGGGACAAGGTaGAGGCACGAGTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQASLGTR*RHESCP
Trigger: AGGACAGGACTCGTGCCTCCACCTTGTCCCCAGACT...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTCCTCAGCAGGTACTCTaGCCACGCTCTCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAPQQVL*PRSPGR
Trigger: TCTACCTGGAGAGCGTGGCCAGAGTACCTGCTGAGG...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACCCTCAGCAGGTACTCTaGCCACGCTCTCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDPQQVL*PRSPGR
Trigger: TCTACCTGGAGAGCGTGGCCAGAGTACCTGCTGAGG...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGTGCGCTTGCCACACTTaGTACAGGTTACCATGTGGC +
Preference number: 4 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLCACHT*YRLPCG
Trigger: GCCACATGGTAACCTGTACCAAGTGTGGCAAGCGCA...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTTGCTCCTCTGCAAGCTaGCCAACCCTGAGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSCSSAS*PTLSPD
Trigger: GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCA...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp TGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGATGCTCCTCTGCAAGCTaGCCAACCCTGAGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: CNISTSLLLCKLANPEPRCSSAS*PTLSPD
Trigger: GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCA...TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCCAAGCATCTCCCATATaGGGTGGGGATGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: PCNISTSLLLCKLANPEPQASPI*GGDGLG
Trigger: ACCCAACCCATCCCCACCCCATATGGGAGATGCTTG...GGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp CTCTGTCTTAACATTTGCTCTCCAGGAACTTCAACAGCAGTCTGGCCAGAGAAGGGGAGGGGTAAGGGGTaGGAGGTGTCTGCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: LCLNICSPGTSTAVWPEKGRGKG*EVSAKA
Trigger: CGCCTTGGCAGACACCTCCCACCCCTTACCCCTCCC...CTTCTCTGGCCAGACTGCTGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTCTACATGCTGCTaGCTGGCATCAAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLTSTCC*LASSRG
Trigger: ACCTCTGCTTGATGCCAGCCAGCAGCATGTAGAGGT...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp CTGAAAGGCTGTAGCTCGAAACCGTTGGCAGAGAAGGCAGAGGCGGGGCCCATTTTCTGGGAGGGGCTTTaGAATCAAGGACCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: LKGCSSKPLAEKAEAGPIFWEGL*NQGPGF
Trigger: AAACCCAGGTCCTTGATTCCAAAGCCCCTCCCAGAA...AATGGGCCCCGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTACAGCCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR TCA 90 bp AACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCGCCGTGTTTGCAAAGTaGGCCCCACAGGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: NPAIFLLACSSASWPTLSAVFAK*APQDLQ
Trigger: CTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGGC...GCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAAGTTCTCCTCCAAGCCTaGTGGTACTGCTCCCCCGTT +
Preference number: 4 (lower is better)
Translates to: KTGMLRGDMASCLTWFWEVLLQA*WYCSPV
Trigger: AACGGGGGAGCAGTACCATCAGGCTTGGAGGAGAAC...TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR TCA 90 bp ATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACCCCACATGGCATCTTGCTTaGCCTGGTTTTGGGAACCCT +
Preference number: 4 (lower is better)
Translates to: ISTSLLLCKLANPEPRHPTWHLA*PGFGNP
Trigger: AGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGT...GGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACGTACAGGAGGAGGGGTaGAACTGTCTAGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDVQEEG*NCLGSG
Trigger: CCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTAC...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp TTGGGTACAGGAGGAGGGGTGAAACTGTCTAGGTTCAGGGAGGAAGACAGGACCGGGGAGGAGGACTTCTaGTTGATGAAACACATGGGC +
Preference number: 4 (lower is better)
Translates to: LGTGGGVKLSRFREEDRTGEEDF*LMKHMG
Trigger: GCCCATGTGTTTCATCAATCAGAAGTCCTCCTCCCC...GGTCCTGTCTTCCTCCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGGCAGGAGAATAGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQGRRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCC...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp CCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCCTCCCTAGGGCAATGTaGGCAAAGTGTTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PCNISTSLLLCKLANPEPLPRAM*AKCCGS
Trigger: TGAGCCACAACACTTTGCTCACATTGCCCTAGGGAG...GGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp TGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGAGAGCCCCACAGGACTTaGAGCTTGGTTCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: CNISTSLLLCKLANPEPREPHRT*SLVPSL
Trigger: CAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTC...TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTCTTCCTGGCCGTGTTTaGAAAGTGAGCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQALPGRV*KVSPTG
Trigger: TCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAG...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTCAGTCCAAGCAGGTCTaGTTCCTGGCCGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAQSKQV*FLAVFA
Trigger: TGCAAACACGGCCAGGAAGCAGACCTGCTTGGACTG...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTTGGGAGATTACAGGCTaGTGGCCAAGGACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAWEITG*WPRTKS
Trigger: GCTCTTGGTCCTTGGCCAGCAGCCTGTAATCTCCCA...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp TGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGAACTGGCCTTGGGCTTTaGCAGCCAAGAGGTACACCC +
Preference number: 4 (lower is better)
Translates to: CNISTSLLLCKLANPEPRTGLGL*QPRGTP
Trigger: GGGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGT...TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCACTGCCTCCACCCATTaGTTCCCCTTTCCGCATAAA +
Preference number: 4 (lower is better)
Translates to: GMLRGDMASCLTWFWEPCTASTH*FPFPHK
Trigger: TTTATGCGGAAAGGGGAAGCAATGGGTGGAGGCAGT...GCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp GTGACTACCACACTGGACAGTGCAGGTGTAGACGGAGTTCAGATCAGACTCCTGGCTTTCTCCCTGACCTaGCCCCAAAAATCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VTTTLDSAGVDGVQIRLLAFSLT*PQKSVG
Trigger: GCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGC...CAGGAGTCTGATCTGAACTCCGTCTACACCTGCACTGTCCAGTGTGGTAGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp TTGGGTACAGGAGGAGGGGTGAAACTGTCTAGGTTCAGGGAGGAAGACAGGACCATCTCTCCAGCAGAATaGTGGAGGCCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LGTGGGVKLSRFREEDRTISPAE*WRPPSS
Trigger: AGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGAT...GGTCCTGTCTTCCTCCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTACAGGAAAGGGCCTCTaGTGGCTGCAGGTGATCATC +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQATGKGL*WLQVII
Trigger: GATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGT...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTAGCTGTACCCAGGGTTaGAATAGGCCTGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQASCTQG*NRPASW
Trigger: CCAGGATGCAGGCCTATTCCAACCCTGGGTACAGCT...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCACAGGACTTGCAGCTTaGTTCCAAGCCTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PCNISTSLLLCKLANPEPTGLAA*FQACWG
Trigger: TCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGT...GGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TTGGGTACAGGAGGAGGGGTGAAACTGTCTAGGTTCAGGGAGGAAGACAGGACCGGCCCATTCCCTACTTaGCTCGAACAGGTCATGCAA +
Preference number: 4 (lower is better)
Translates to: LGTGGGVKLSRFREEDRTGPFPT*LEQVMQ
Trigger: TTGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCC...GGTCCTGTCTTCCTCCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTCCTCAGCAGGTACTCTaGCCACGCTCTCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: WEPCNISTSLLLCKLANPPQQVL*PRSPGR
Trigger: TCTACCTGGAGAGCGTGGCCAGAGTACCTGCTGAGG...AGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCACTGCTCCCCCGTTTTaGTCTTCGGCACCACTGACC +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTTAPPF*SSAPLT
Trigger: GGTCAGTGGTGCCGAAGACCAAAACGGGGGAGCAGT...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp TGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGAACTGCTCCCCCGTTTTaGTCTTCGGCACCACTGACC +
Preference number: 4 (lower is better)
Translates to: CNISTSLLLCKLANPEPRTAPPF*SSAPLT
Trigger: GGTCAGTGGTGCCGAAGACCAAAACGGGGGAGCAGT...TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp GCCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAATGCGCTTGCCACACTTaGTACAGGTTACCATGTGGC +
Preference number: 4 (lower is better)
Translates to: ANPEPRHPRLFPCKALKKCACHT*YRLPCG
Trigger: GCCACATGGTAACCTGTACCAAGTGTGGCAAGCGCA...TTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TGCTTTCTCCCTGACCTGCCCCCAAAAATCAGTGGGCTAGGAAAGGGAATGAAATGCTCCTCTGCAAGCTaGCCAACCCTGAGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: CFLPDLPPKISGLGKGMKCSSAS*PTLSPD
Trigger: GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCA...TTTCATTCCCTTTCCTAGCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACCAAGAGGTACACCCCTaGGAAGACAGGCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDQEVHP*EDRHAQ
Trigger: CTGAGCATGCCTGTCTTCCCAGGGGTGTACCTCTTG...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GCCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAAACTTCAACAGCAGTCTaGCCAGAGAAGAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: ANPEPRHPRLFPCKALKKTSTAV*PEKSTG
Trigger: GCCTGTGCTCTTCTCTGGCCAGACTGCTGTTGAAGT...TTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACCTGGTCTCAAACTCCTaGCCTCGAGTCATCCACGCA +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDLVSNS*PRVIHA
Trigger: TGCGTGGATGACTCGAGGCCAGGAGTTTGAGACCAG...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp TTGGGTACAGGAGGAGGGGTGAAACTGTCTAGGTTCAGGGAGGAAGACAGGACCAGCAGAGGTCATCACTaGGTGCTGAACAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LGTGGGVKLSRFREEDRTSRGHH*VLNRSA
Trigger: AGCTGACCTGTTCAGCACCCAGTGATGACCTCTGCT...GGTCCTGTCTTCCTCCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACGGAAAGGGCCTCTGCTaGCTGCAGGTGATCATCTTG +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDGKGLC*LQVIIL
Trigger: CAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCC...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACTGGGAACGTCACTCCTaGTGTGCATGTCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDWERHS*CACPDP
Trigger: AGGGTCTGGACATGCACACCAGGAGTGACGTTCCCA...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 72 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTaGCCAGCCAAGAGGTACACCCCTGGGAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: HVIYTSSHWPWA*PAKRYTPGKTG
Trigger: GCCTGTCTTCCCAGGGGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACGCCGTGTTTGCAAAGTaGGCCCCACAGGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYAVFAK*APQDLQ
Trigger: CTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGGC...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTATGAGCTCCTCTCGCTaGAAGGCTGTAGCTCGAAAC +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAMSSSR*KAVARN
Trigger: GTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTCAT...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACATGAGCTCCTCTCGCTaGAAGGCTGTAGCTCGAAAC +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDMSSSR*KAVARN
Trigger: GTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTCAT...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp CTTCATGAGCTCCTCTCGCTGAAAGGCTGTAGCTCGAAACCGTTGGCAGAGAAGATGAGCTCCTCTCGCTaGAAGGCTGTAGCTCGAAAC +
Preference number: 4 (lower is better)
Translates to: LHELLSLKGCSSKPLAEKMSSSR*KAVARN
Trigger: GTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTCAT...CTTCTCTGCCAACGGTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTCATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR TCA 90 bp GCCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAAGACAAAGCTGTCCTCTaGGTCAATAGACTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: ANPEPRHPRLFPCKALKKDKAVL*VNRLGL
Trigger: GAGACCCAGTCTATTGACTCAGAGGACAGCTTTGTC...TTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR TCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAATGCTGGAGTCCTTTCTaGTCCTTGTATAGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQCWSPF*SLYSRV
Trigger: GACCCGGCTATACAAGGATCAGAAAGGACTCCAGCA...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTTGCTGGAGTCCTTTCTaGTCCTTGTATAGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQACWSPF*SLYSRV
Trigger: GACCCGGCTATACAAGGATCAGAAAGGACTCCAGCA...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp AACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCTTCCTGGCCGTGTTTaGAAAGTGAGCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: NPAIFLLACSSASWPTLSLPGRV*KVSPTG
Trigger: TCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAG...GCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CTTCATCTTCATGAGCTCCTCTCGCTGAAAGGCTGTAGCTCGAAACCGTTGGCACTTCCTGGCCGTGTTTaGAAAGTGAGCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: LHLHELLSLKGCSSKPLALPGRV*KVSPTG
Trigger: TCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAG...TGCCAACGGTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTCATGAAGATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR GCA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTTGGGAGATTACAGGCTaGTGGCCAAGGACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSWEITG*WPRTKS
Trigger: GCTCTTGGTCCTTGGCCAGCAGCCTGTAATCTCCCA...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp TGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTACTAGCTTGCTCCTCTaGAAGCTGGCCAACCCTGAG +
Preference number: 4 (lower is better)
Translates to: WEPCNISTSLLLCKLANPTSLLL*KLANPE
Trigger: CTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGT...AGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCACTGGCCTTGGGCTTTaGCAGCCAAGAGGTACACCC +
Preference number: 4 (lower is better)
Translates to: WFWEPCNISTSLLLCKLATGLGL*QPRGTP
Trigger: GGGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGT...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAAGCTCACTGCAACCTCTaGTTCCCGGGTTCACAAGCA +
Preference number: 4 (lower is better)
Translates to: KTGMLRGDMASCLTWFWEAHCNL*FPGSQA
Trigger: TGCTTGTGAACCCGGGAAGCAGAGGTTGCAGTGAGC...TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp CCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGGTTTGTACAAGCCTaGGCACACACAGCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: PCNISTSLLLCKLANPEPRFVQA*AHTAVC
Trigger: ACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCT...GGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACACTCCACTCTGAGTaGAGGCTCATCAGGACACCA +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDTLHSE*RLIRTP
Trigger: TGGTGTCCTGATGAGCCTGCACTCAGAGTGGAGTGT...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCAGCTGTACCCAGGGTTaGAATAGGCCTGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTSCTQG*NRPASW
Trigger: CCAGGATGCAGGCCTATTCCAACCCTGGGTACAGCT...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAATGGTTCCAAGCCTGTTaGGGAAGGGAAGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQWFQAC*GREGAV
Trigger: TACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCA...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACTGGTTCCAAGCCTGTTaGGGAAGGGAAGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDWFQAC*GREGAV
Trigger: TACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCA...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAACAGGACTTGCAGCTTaGTTCCAAGCCTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQTGLAA*FQACWG
Trigger: TCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGT...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGGCCCATTCCCTACTTaGCTCGAACAGGTCATGCAA +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQGPFPT*LEQVMQ
Trigger: TTGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCC...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TCTTCTACTCGACATGCTGAATGTCTTCTGGGAGGGGCTTTGGAATCAAGGACCGTAGCTCGAAACCGTTaGCAGAGAAGGCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SSTRHAECLLGGALESRTVARNR*QRRQRR
Trigger: CCGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTAC...GGTCCTTGATTCCAAAGCCCCTCCCAGAAGACATTCAGCATGTCGAGTAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR CCA 90 bp TGCTTTCTCCCTGACCTGCCCCCAAAAATCAGTGGGCTAGGAAAGGGAATGAAAAGTCTGGGGACAAGGTaGAGGCACGAGTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CFLPDLPPKISGLGKGMKSLGTR*RHESCP
Trigger: AGGACAGGACTCGTGCCTCCACCTTGTCCCCAGACT...TTTCATTCCCTTTCCTAGCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp CTCTGTCTTAACATTTGCTCTCCAGGAACTTCAACAGCAGTCTGGCCAGAGAAGCTCCTGAACCTGGGCTaGGGGAACAGAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LCLNICSPGTSTAVWPEKLLNLG*GNRGGL
Trigger: CAAGCCACCTCTGTTCCCCCAGCCCAGGTTCAGGAG...CTTCTCTGGCCAGACTGCTGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp TTGGGTACAGGAGGAGGGGTGAAACTGTCTAGGTTCAGGGAGGAAGACAGGACCGAGACACATGGCCATTaGCCTGCTGATTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LGTGGGVKLSRFREEDRTETHGH*PADSPE
Trigger: TTCAGGAGAATCAGCAGGCCAATGGCCATGTGTCTC...GGTCCTGTCTTCCTCCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
CDS-3UTR CCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACCCTCAGCAGGTACTCTaGCCACGCTCTCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYPQQVL*PRSPGR
Trigger: TCTACCTGGAGAGCGTGGCCAGAGTACCTGCTGAGG...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGTCTGAGTCAATAGACTaGGTCTCATCCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLSESID*VSSSAG
Trigger: ACCTGCTGAGGATGAGACCCAGTCTATTGACTCAGA...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTTGCGCTTGCCACACTTaGTACAGGTTACCATGTGGC +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQACACHT*YRLPCG
Trigger: GCCACATGGTAACCTGTACCAAGTGTGGCAAGCGCA...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACAAGAGGTACACCCCTaGGAAGACAGGCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: CNISTSLLLCKLANPEPRQEVHP*EDRHAQ
Trigger: CTGAGCATGCCTGTCTTCCCAGGGGTGTACCTCTTG...TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TTGGGTACAGGAGGAGGGGTGAAACTGTCTAGGTTCAGGGAGGAAGACAGGACCAGCCTGATGTTTTGTTaGCTCCCAGAGTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LGTGGGVKLSRFREEDRTSLMFC*LPESGQ
Trigger: CTGACCTGACTCTGGGAGCCAACAAAACATCAGGCT...GGTCCTGTCTTCCTCCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp ATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACCCCATACAAAAATTAGCCTaGTGTGGTGGTGGGCGCCTA +
Preference number: 4 (lower is better)
Translates to: ISTSLLLCKLANPEPRHPIQKLA*CGGGRL
Trigger: TAGGCGCCCACCACCACACCAGGCTAATTTTTGTAT...GGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCCTACATTGCCCAGGTTaGTCTCAAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PCNISTSLLLCKLANPEPLHCPG*SQTPEL
Trigger: GAGCTCAGGAGTTTGAGACCAACCTGGGCAATGTAG...GGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 72 bp ACCTGGTTTTGGGAACCCTGCAATATTTCTACTAGCTaGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TWFWEPCNISTS*LLCKLANPEPR
Trigger: TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
3UTR CAA 72 bp CACTTAGCCCAGAGCCTAGCACATAGTTATCTAGAGTaGGGAACGTCACTCCTGGTGTGCATGTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: HLAQSLAHSYLE*GTSLLVCMSRP
Trigger: GGGTCTGGACATGCACACCAGGAGTGACGTTCCCAACTCTAGATAACTATGTGCTAGGCTCTGGGCTAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp TGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTATGAGCTCCTCTCGCTaGAAGGCTGTAGCTCGAAAC +
Preference number: 4 (lower is better)
Translates to: WEPCNISTSLLLCKLANPMSSSR*KAVARN
Trigger: GTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTCAT...AGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCATGAGCTCCTCTCGCTaGAAGGCTGTAGCTCGAAAC +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTMSSSR*KAVARN
Trigger: GTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTCAT...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTTCACCTTCATCTTCATaGGCTCCTCTCGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQASPSSS*APLAER
Trigger: CCTTTCAGCGAGAGGAGCTCATGAAGATGAAGGTGA...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GTGACTACCACACTGGACAGTGCAGGTGTAGACGGAGTTCAGATCAGACTCCTGGACAAAGCTGTCCTCTaGGTCAATAGACTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VTTTLDSAGVDGVQIRLLDKAVL*VNRLGL
Trigger: GAGACCCAGTCTATTGACTCAGAGGACAGCTTTGTC...CAGGAGTCTGATCTGAACTCCGTCTACACCTGCACTGTCCAGTGTGGTAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGACAAAGCTGTCCTCTaGGTCAATAGACTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQDKAVL*VNRLGL
Trigger: GAGACCCAGTCTATTGACTCAGAGGACAGCTTTGTC...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
CDS-3UTR TCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTGACAAAGCTGTCCTCTaGGTCAATAGACTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQADKAVL*VNRLGL
Trigger: GAGACCCAGTCTATTGACTCAGAGGACAGCTTTGTC...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
CDS-3UTR TCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTAGCAGCCCTTGTAGTTaGCAAAGTTGCGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQASSPCS*QSCEPR
Trigger: TCTTGGCTCGCAACTTTGTCAACTACAAGGGCTGCT...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp TGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTTGCTGGAGTCCTTTCTaGTCCTTGTATAGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: WEPCNISTSLLLCKLANPCWSPF*SLYSRV
Trigger: GACCCGGCTATACAAGGATCAGAAAGGACTCCAGCA...AGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAATGCTGGAGTCCTTTCTaGTCCTTGTATAGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: KTGMLRGDMASCLTWFWECWSPF*SLYSRV
Trigger: GACCCGGCTATACAAGGATCAGAAAGGACTCCAGCA...TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTTTCCCTGTAAGGCACTaGAGAAACCGATGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAFPVRH*RNRCKL
Trigger: GAGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAA...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACTTCCCTGTAAGGCACTaGAGAAACCGATGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDFPVRH*RNRCKL
Trigger: GAGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAA...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCAGCAGTTTGGGAGCCTaGTGTTTTGTTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTSSLGA*CFVGSQ
Trigger: CTGGGAGCCAACAAAACATCAGGCTCCCAAACTGCT...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCTCATTCAGTACCTCCTaGAAGCTCTTAAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GMLRGDMASCLTWFWEPCSFSTS*KLLSAL
Trigger: CAGAGCACTTAAGAGCTTTCAGGAGGTACTGAATGA...GCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAATCTCCCAGGGTAACCTaGAGACCTAACTGGGCATAC +
Preference number: 4 (lower is better)
Translates to: KTGMLRGDMASCLTWFWESPRVT*RPNWAY
Trigger: GTATGCCCAGTTAGGTCTTCAGGTTACCCTGGGAGA...TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAATGGGCCAACCTTTTCTaGGCCATAGTCCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: KTGMLRGDMASCLTWFWEWANLF*AIVQLY
Trigger: GTACAGCTGGACTATGGCTCAGAAAAGGTTGGCCCA...TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp TGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTTCTGCTGGCTGCAGGTaGTCATCTTGTCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: WEPCNISTSLLLCKLANPSAGCR*SSCPFS
Trigger: AGAGAAGGGACAAGATGATCACCTGCAGCCAGCAGA...AGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp TTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACTGGGTCAGGAAGGCCTaGTGCTCAGGAAAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FWEPCNISTSLLLCKLANWVRKA*CSGKSG
Trigger: CCCAGACTTTCCTGAGCAGCAGGCCTTCCTGACCCA...GTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAAAGATCTCTTTCAGCTaGCGCACTGTCAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQKISFS*RTVRPS
Trigger: TGAAGGCCTGACAGTGCGGCAGCTGAAAGAGATCTT...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GCCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAATGGGACATTCATTCATaGGCTTGCCACACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: ANPEPRHPRLFPCKALKKWDIHS*ACHTWY
Trigger: GTACCAAGTGTGGCAAGCGCATGAATGAATGTCCCA...TTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTCAGGACCGGAAGACATaGACAGCTCGGATTACATAC +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAQDRKT*TARITY
Trigger: GTATGTAATCCGAGCTGTGCATGTCTTCCGGTCCTG...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp ATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACCCCATATTTCTACTAGCTTaGTCCTCTGCAAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ISTSLLLCKLANPEPRHPIFLLA*SSASWP
Trigger: TGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATAT...GGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCGGTGACATGGCATCTTaGTTGACCTGGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PCNISTSLLLCKLANPEPGDMAS*LTWFWE
Trigger: TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC...GGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACCTGGGAAGACAGGCATaGTCAGGGGTGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYLGRQA*SGVTWH
Trigger: ATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAG...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCCAGCAGCAGGGATTATaGACGCACTATCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTQQQGL*THYPLQ
Trigger: CTGCAAGGGATAGTGCGTGCATAATCCCTGCTGCTG...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAACTGCCTCCACCCATTaGTTCCCCTTTCCGCATAAA +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQTASTH*FPFPHK
Trigger: TTTATGCGGAAAGGGGAAGCAATGGGTGGAGGCAGT...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGAGAAAATGGTTTCTCCTaGTGGGTGTGGTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: CNISTSLLLCKLANPEPRENGFS*WVWWLT
Trigger: CGTGAGCCACCACACCCAGCAGGAGAAACCATTTTC...TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGGACCCAGCCCCACTTaGCCTTATTGGTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: WEPCNISTSLLLCKLANPGPSPT*PYWLLT
Trigger: TGTAAGCAACCAATAAGGGCAAGTGGGGCTGGGTCC...AGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCTCAGTTGCAGGTGTaGATGTTCCAGCCAACACTC +
Preference number: 4 (lower is better)
Translates to: KTGMLRGDMASCLTWFWEPQLQV*MFQPTL
Trigger: GAGTGTTGGCTGGAACATGCACACCTGCAACTGAGG...TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCCTGTCCTACAGAGCTTaGTTGAAGCCTGCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTLSYRA*LKPARV
Trigger: GACCCTAGCAGGCTTCAAGCAAGCTCTGTAGGACAG...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415395.6
CDS-3UTR CCA 90 bp CACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCAGGCTCCCTGGGGTGGTaGGACCTCCTCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: HSKITEPRTYPCDLYKFPGSLGW*DLLRLS
Trigger: GGACAGCCTGAGGAGGTCCCACCACCCCAGGGAGCC...TGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CTTCTACTCGACATGCTGAATGTCTTCTGGGAGGGGCTTTGGAATCAAGGACCTAGCTGTACCCAGGGTTaGAATAGGCCTGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LLLDMLNVFWEGLWNQGPSCTQG*NRPASW
Trigger: CCAGGATGCAGGCCTATTCCAACCCTGGGTACAGCT...AGGTCCTTGATTCCAAAGCCCCTCCCAGAAGACATTCAGCATGTCGAGTAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR CCA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTGTAGCTCGAAACCGTTaGCAGAGAAGGCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RGDMASCLTWFWEPCNISVARNR*QRRQRR
Trigger: CCGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTAC...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTGAGACACATGGCCATTaGCCTGCTGATTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAETHGH*PADSPE
Trigger: TTCAGGAGAATCAGCAGGCCAATGGCCATGTGTCTC...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp TTGGGTACAGGAGGAGGGGTGAAACTGTCTAGGTTCAGGGAGGAAGACAGGACCTCTGAGTCAATAGACTaGGTCTCATCCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LGTGGGVKLSRFREEDRTSESID*VSSSAG
Trigger: ACCTGCTGAGGATGAGACCCAGTCTATTGACTCAGA...GGTCCTGTCTTCCTCCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
CDS-3UTR CCA 90 bp TGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTACTTCAACAGCAGTCTaGCCAGAGAAGAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: WEPCNISTSLLLCKLANPTSTAV*PEKSTG
Trigger: GCCTGTGCTCTTCTCTGGCCAGACTGCTGTTGAAGT...AGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCAGGGAGGGGTAAGGGGTaGGAGGTGTCTGCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: PKFWKVLCSSVTIITPRSGRGKG*EVSAKA
Trigger: CGCCTTGGCAGACACCTCCCACCCCTTACCCCTCCC...TGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGCTCCTGCAAAGGCTGTaGTTCAGAATCAAATCATCC +
Preference number: 4 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLLLQRL*FRIKSS
Trigger: GGATGATTTGATTCTGAACCACAGCCTTTGCAGGAG...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCAGTCTTCCCACCTTaGCCTCCTAAAGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQAVFPP*PPKVWK
Trigger: TTTCCACACTTTAGGAGGCCAAGGTGGGAAGACTGC...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp CCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCCCTCAGCCTCCCAAGTaGCTAAGACTTAACAAACAG +
Preference number: 4 (lower is better)
Translates to: PCNISTSLLLCKLANPEPPQPPK*LRLNKQ
Trigger: CTGTTTGTTAAGTCTTAGCCACTTGGGAGGCTGAGG...GGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp CTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTGAAGCTTTTCCCTGCTCCTTaGGCGCCTGGTCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LYYSCIQKVPCISQGNLKLFPAP*APGQGG
Trigger: ACCTCCCTGACCAGGCGCCCAAGGAGCAGGGAAAAG...CTTCAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCCTACATGCTGCTGGCTaGCATCAAGCAGAGGTCATC +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTLHAAG*HQAEVI
Trigger: GATGACCTCTGCTTGATGCCAGCCAGCAGCATGTAG...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTACCTCTACATGCTGCTaGCTGGCATCAAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSTSTCC*LASSRG
Trigger: ACCTCTGCTTGATGCCAGCCAGCAGCATGTAGAGGT...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACCCCACTTGCCCTTATTaGTTGCTTACACCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDPTCPY*LLTPRV
Trigger: CACTCTGGGTGTAAGCAACCAATAAGGGCAAGTGGG...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGCTGTCCTCTCCAACCTaGACCCAGCCCCACTTGCCC +
Preference number: 4 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWLSSPT*TQPHLP
Trigger: GGGCAAGTGGGGCTGGGTCCAGGTTGGAGAGGACAG...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATGCCGTGTTTGCAAAGTaGGCCCCACAGGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: REEDRTQVLESSLFISYHAVFAK*APQDLQ
Trigger: CTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGGC...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTTCACCTTCATCTTCATaGGCTCCTCTCGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSSPSSS*APLAER
Trigger: CCTTTCAGCGAGAGGAGCTCATGAAGATGAAGGTGA...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTGACAAAGCTGTCCTCTaGGTCAATAGACTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSDKAVL*VNRLGL
Trigger: GAGACCCAGTCTATTGACTCAGAGGACAGCTTTGTC...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTAGCAGCCCTTGTAGTTaGCAAAGTTGCGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSSSPCS*QSCEPR
Trigger: TCTTGGCTCGCAACTTTGTCAACTACAAGGGCTGCT...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp GCCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAAAACACAGTCAATGGGTaGGTCCATGCAGATCTTACA +
Preference number: 4 (lower is better)
Translates to: ANPEPRHPRLFPCKALKKNTVNG*VHADLT
Trigger: TGTAAGATCTGCATGGACTCACCCATTGACTGTGTT...TTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGCTGGCCAACCCTaGGCCCAGACACCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNQAGQP*AQTPQA
Trigger: AGCCTGGGGTGTCTGGGCTCAGGGTTGGCCAGCTTG...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACAAGCTGGCCAACCCTaGGCCCAGACACCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VLESSLFISYHHHSKITEQAGQP*AQTPQA
Trigger: AGCCTGGGGTGTCTGGGCTCAGGGTTGGCCAGCTTG...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp TGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTACATGGCATCTTGCTTaGCCTGGTTTTGGGAACCCT +
Preference number: 4 (lower is better)
Translates to: WEPCNISTSLLLCKLANPTWHLA*PGFGNP
Trigger: AGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGT...AGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCACATGGCATCTTGCTTaGCCTGGTTTTGGGAACCCT +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTTWHLA*PGFGNP
Trigger: AGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGT...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTAGGCATGCTCAGGGGTaGCATGGCATCTTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: RGDMASCLTWFWEPCNISRHAQG*HGILLD
Trigger: GTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCT...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp TTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACGTACAGGAGGAGGGGTaGAACTGTCTAGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: FWEPCNISTSLLLCKLANVQEEG*NCLGSG
Trigger: CCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTAC...GTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACCTTCATGAGCAAATCTaGTTCCCCCAACTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDLHEQI*FPQLLQ
Trigger: TTGCAGGAGTTGGGGGAATCAGATTTGCTCATGAAG...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTCCCCCAACTTTGATCTaGTTGACTTTGGCTTCCACC +
Preference number: 4 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSPPTLI*LTLAST
Trigger: GGTGGAAGCCAAAGTCAATCAGATCAAAGTTGGGGG...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGGTTGTCCTGTTGTCCTaGGCAACATTATGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLVVLLS*ATLCKA
Trigger: TGCTTTACATAATGTTGCTCAGGACAACAGGACAAC...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTCAGTCCAAGCAGGTCTaGTTCCTGGCCGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: RGDMASCLTWFWEPCNISQSKQV*FLAVFA
Trigger: TGCAAACACGGCCAGGAAGCAGACCTGCTTGGACTG...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTTGGGAGATTACAGGCTaGTGGCCAAGGACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: RGDMASCLTWFWEPCNISWEITG*WPRTKS
Trigger: GCTCTTGGTCCTTGGCCAGCAGCCTGTAATCTCCCA...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTGGGTCAGGAAGGCCTaGTGCTCAGGAAAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LNQEHTHVIYTSSHWPWAWVRKA*CSGKSG
Trigger: CCCAGACTTTCCTGAGCAGCAGGCCTTCCTGACCCA...AGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAATGGGACATTCATTCATaGGCTTGCCACACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQWDIHS*ACHTWY
Trigger: GTACCAAGTGTGGCAAGCGCATGAATGAATGTCCCA...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTCAGGACCGGAAGACATaGACAGCTCGGATTACATAC +
Preference number: 4 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVQDRKT*TARITY
Trigger: GTATGTAATCCGAGCTGTGCATGTCTTCCGGTCCTG...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCCAGGACCGGAAGACATaGACAGCTCGGATTACATAC +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTQDRKT*TARITY
Trigger: GTATGTAATCCGAGCTGTGCATGTCTTCCGGTCCTG...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp AACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCAGGACCGGAAGACATaGACAGCTCGGATTACATAC +
Preference number: 4 (lower is better)
Translates to: NPAIFLLACSSASWPTLSQDRKT*TARITY
Trigger: GTATGTAATCCGAGCTGTGCATGTCTTCCGGTCCTG...GCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp TTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCTGGGAAGACAGGCATaGTCAGGGGTGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: FWEPCNISTSLLLCKLANLGRQA*SGVTWH
Trigger: ATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAG...GTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTACTGGCCTTGGGCTTTaGCAGCCAAGAGGTACACCC +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTTGLGL*QPRGTP
Trigger: GGGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGT...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTACTGCCTCCACCCATTaGTTCCCCTTTCCGCATAAA +
Preference number: 4 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSTASTH*FPFPHK
Trigger: TTTATGCGGAAAGGGGAAGCAATGGGTGGAGGCAGT...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTGCTTTCTCCCTGACCTaGCCCCAAAAATCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RGDMASCLTWFWEPCNISAFSLT*PQKSVG
Trigger: GCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGC...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGATTCCCCCAACTCCTaGAAAGGCTGTGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: WEPCNISTSLLLCKLANPDSPNS*KGCGSE
Trigger: TTCTGAACCACAGCCTTTGCAGGAGTTGGGGGAATC...AGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTTTTAGAACCCTCAGTTaGAGGTGTGCATGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAFRTLS*RCACSS
Trigger: GCTGGAACATGCACACCTGCAACTGAGGGTTCTAAA...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp ATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACCCCAAAGAACAGCTCCTGTaGTACCTGAGGCTGATTTAT +
Preference number: 4 (lower is better)
Translates to: ISTSLLLCKLANPEPRHPKEQLL*YLRLIY
Trigger: ATAAATCAGCCTCAGGTAGCACAGGAGCTGTTCTTT...GGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTAGGCTCCCTGGGGTGGTaGGACCTCCTCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLGSLGW*DLLRLS
Trigger: GGACAGCCTGAGGAGGTCCCACCACCCCAGGGAGCC...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACAGCTGTACCCAGGGTTaGAATAGGCCTGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: FWEPCNISTSLLLCKLANSCTQG*NRPASW
Trigger: CCAGGATGCAGGCCTATTCCAACCCTGGGTACAGCT...GTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TCTTCTACTCGACATGCTGAATGTCTTCTGGGAGGGGCTTTGGAATCAAGGACCTGGTTCCAAGCCTGTTaGGGAAGGGAAGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SSTRHAECLLGGALESRTWFQAC*GREGAV
Trigger: TACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCA...GGTCCTTGATTCCAAAGCCCCTCCCAGAAGACATTCAGCATGTCGAGTAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR CCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATGTAGCTCGAAACCGTTaGCAGAGAAGGCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: REEDRTQVLESSLFISYHVARNR*QRRQRR
Trigger: CCGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTAC...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTAGTCTGGGGACAAGGTaGAGGCACGAGTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LNQEHTHVIYTSSHWPWASLGTR*RHESCP
Trigger: AGGACAGGACTCGTGCCTCCACCTTGTCCCCAGACT...AGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATCTCCTGAACCTGGGCTaGGGGAACAGAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYLLNLG*GNRGGL
Trigger: CAAGCCACCTCTGTTCCCCCAGCCCAGGTTCAGGAG...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGCTCCTGAACCTGGGCTaGGGGAACAGAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWLLNLG*GNRGGL
Trigger: CAAGCCACCTCTGTTCCCCCAGCCCAGGTTCAGGAG...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTTCTGAGTCAATAGACTaGGTCTCATCCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQASESID*VSSSAG
Trigger: ACCTGCTGAGGATGAGACCCAGTCTATTGACTCAGA...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp ACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCACTGCTCCCCCGTTTTaGTCTTCGGCACCACTGACC +
Preference number: 4 (lower is better)
Translates to: TEPRTYPCDLYKFPLALGTAPPF*SSAPLT
Trigger: GGTCAGTGGTGCCGAAGACCAAAACGGGGGAGCAGT...GCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCTATACAAGTTCCCACTaGCCTTGGGCTTTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: WFWEPCNISTSLLLCKLAYTSSH*PWALPA
Trigger: GGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATA...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CATGTGTTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTTATACAAGTTCCCACTaGCCTTGGGCTTTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HVFCAWPRFCSKLLSPPAYTSSH*PWALPA
Trigger: GGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATA...AGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAACACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTCAAGCATCTCCCATATaGGGTGGGGATGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: RGDMASCLTWFWEPCNISQASPI*GGDGLG
Trigger: ACCCAACCCATCCCCACCCCATATGGGAGATGCTTG...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp AACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCAGCCTGATGTTTTGTTaGCTCCCAGAGTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: NPAIFLLACSSASWPTLSSLMFC*LPESGQ
Trigger: CTGACCTGACTCTGGGAGCCAACAAAACATCAGGCT...GCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTTTGACCAAGGTCACTTaGCCCAACCACAGGCTAATC +
Preference number: 4 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVLTKVT*PNHRLI
Trigger: GATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAA...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTCCCACTTGCCCTTATTaGTTGCTTACACCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSPTCPY*LLTPRV
Trigger: CACTCTGGGTGTAAGCAACCAATAAGGGCAAGTGGG...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 72 bp AGTTACAACAACACTGAGCATCTTGACCAAGGTCACTaGGCCCAACCACAGGCTAATCCCAGGCCATGTGCA +
Preference number: 4 (lower is better)
Translates to: SYNNTEHLDQGH*AQPQANPRPCA
Trigger: TGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGATGCTCAGTGTTGTTGTAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp TTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTCCTCTATCACCTTCATCTTCATaGGCTCCTCTCGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: FCAWPRFCSKLLSPPAPLSPSSS*APLAER
Trigger: CCTTTCAGCGAGAGGAGCTCATGAAGATGAAGGTGA...TAGAGGAGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAAACACAGTCAATGGGTaGGTCCATGCAGATCTTACA +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQNTVNG*VHADLT
Trigger: TGTAAGATCTGCATGGACTCACCCATTGACTGTGTT...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACTTCCCTGTAAGGCACTaGAGAAACCGATGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYFPVRH*RNRCKL
Trigger: GAGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAA...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTCAAGCTGGCCAACCCTaGGCCCAGACACCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFQAGQP*AQTPQA
Trigger: AGCCTGGGGTGTCTGGGCTCAGGGTTGGCCAGCTTG...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTGTACAGGAGGAGGGGTaGAACTGTCTAGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTVQEEG*NCLGSG
Trigger: CCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTAC...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GTGACTACCACACTGGACAGTGCAGGTGTAGACGGAGTTCAGATCAGACTCCTGTCATTCAGTACCTCCTaGAAGCTCTTAAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VTTTLDSAGVDGVQIRLLSFSTS*KLLSAL
Trigger: CAGAGCACTTAAGAGCTTTCAGGAGGTACTGAATGA...CAGGAGTCTGATCTGAACTCCGTCTACACCTGCACTGTCCAGTGTGGTAGTCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATGAGGCCTCCCTCTTCTaGACCTCTACATGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYEASLF*TSTCCW
Trigger: CCAGCAGCATGTAGAGGTTCAGAAGAGGGAGGCCTC...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp CTCTGTCTTAACATTTGCTCTCCAGGAACTTCAACAGCAGTCTGGCCAGAGAAGTCTGCTGGCTGCAGGTaGTCATCTTGTCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LCLNICSPGTSTAVWPEKSAGCR*SSCPFS
Trigger: AGAGAAGGGACAAGATGATCACCTGCAGCCAGCAGA...CTTCTCTGGCCAGACTGCTGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp CTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTCCTACAGAGCTTGCTTaGAGCCTGCTAGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LNQEHTHVIYTSSHWPWAPTELA*SLLGSP
Trigger: AGGAGACCCTAGCAGGCTTCAAGCAAGCTCTGTAGG...AGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415395.6
CDS-3UTR GCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGAGCCCCACAGGACTTaGAGCTTGGTTCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWEPHRT*SLVPSL
Trigger: CAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTC...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTCTTCCTGGCCGTGTTTaGAAAGTGAGCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTLPGRV*KVSPTG
Trigger: TCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAG...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GACTGTGAGGGCTCAAATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCAGTCCAAGCAGGTCTaGTTCCTGGCCGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: DCEGSNTSPTHCMVLPKEQSKQV*FLAVFA
Trigger: TGCAAACACGGCCAGGAAGCAGACCTGCTTGGACTG...CTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATTTGAGCCCTCACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCAGTCCAAGCAGGTCTaGTTCCTGGCCGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: REEDRTQVLESSLFISYHQSKQV*FLAVFA
Trigger: TGCAAACACGGCCAGGAAGCAGACCTGCTTGGACTG...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAACAATGGGTGAGTCCATaGAGATCTTACACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQQWVSP*RSYTGS
Trigger: AGAACCTGTGTAAGATCTGCATGGACTCACCCATTG...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GCCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAAATTCATTCATGCGCTTaGCACACTTGGTACAGGTTA +
Preference number: 4 (lower is better)
Translates to: ANPEPRHPRLFPCKALKKIHSCA*HTWYRL
Trigger: TAACCTGTACCAAGTGTGGCAAGCGCATGAATGAAT...TTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCCAGGACCGGAAGACATaGACAGCTCGGATTACATAC +
Preference number: 4 (lower is better)
Translates to: WFWEPCNISTSLLLCKLAQDRKT*TARITY
Trigger: GTATGTAATCCGAGCTGTGCATGTCTTCCGGTCCTG...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCGGTGACATGGCATCTTaGTTGACCTGGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTGDMAS*LTWFWE
Trigger: TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTCTGGGAAGACAGGCATaGTCAGGGGTGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: LNQEHTHVIYTSSHWPWALGRQA*SGVTWH
Trigger: ATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAG...AGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGACTGGCCTTGGGCTTTaGCAGCCAAGAGGTACACCC +
Preference number: 4 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWTGLGL*QPRGTP
Trigger: GGGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGT...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTCAGCAGCAGGGATTATaGACGCACTATCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RGDMASCLTWFWEPCNISQQQGL*THYPLQ
Trigger: CTGCAAGGGATAGTGCGTGCATAATCCCTGCTGCTG...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp GACTGTGAGGGCTCAAATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGGCTTTCTCCCTGACCTaGCCCCAAAAATCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: DCEGSNTSPTHCMVLPKEAFSLT*PQKSVG
Trigger: GCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGC...CTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATTTGAGCCCTCACAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACGCTTGGCCACGCTTCTaGAGCAAACTCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYAWPRF*SKLLSP
Trigger: AGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGC...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCGCTTGGCCACGCTTCTaGAGCAAACTCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: WFWEPCNISTSLLLCKLAAWPRF*SKLLSP
Trigger: AGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGC...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp GACTGTGAGGGCTCAAATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGGCAATCTCAGCTCACTaGAACCTCTGCTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: DCEGSNTSPTHCMVLPKEAISAH*NLCFPG
Trigger: ACCCGGGAAGCAGAGGTTGCAGTGAGCTGAGATTGC...CTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATTTGAGCCCTCACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTCTTGCCCTTATTGGTTaGTTACACCCAGAGTGCACA +
Preference number: 4 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSLALIG*LHPECT
Trigger: TGTGCACTCTGGGTGTAAGCAACCAATAAGGGCAAG...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCAACGTCACTCCTGGTGTaGATGTCCAGACCCTACCCG +
Preference number: 4 (lower is better)
Translates to: GRQDPSSGKFSVHQLPSSTSLLV*MSRPYP
Trigger: CGGGTAGGGTCTGGACATGCACACCAGGAGTGACGT...TGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp CTCTGTCTTAACATTTGCTCTCCAGGAACTTCAACAGCAGTCTGGCCAGAGAAGACAGGACTTGCAGCTTaGTTCCAAGCCTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LCLNICSPGTSTAVWPEKTGLAA*FQACWG
Trigger: TCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGT...CTTCTCTGGCCAGACTGCTGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTGGCCCATTCCCTACTTaGCTCGAACAGGTCATGCAA +
Preference number: 4 (lower is better)
Translates to: RGDMASCLTWFWEPCNISGPFPT*LEQVMQ
Trigger: TTGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCC...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACAGTCTGGGGACAAGGTaGAGGCACGAGTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: EDRTQVLESSLFISYHHHSLGTR*RHESCP
Trigger: AGGACAGGACTCGTGCCTCCACCTTGTCCCCAGACT...GTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTGAAGAACACAGTCAATaGGTGAGTCCATGCAGATCT +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAEEHSQ*VSPCRS
Trigger: AGATCTGCATGGACTCACCCATTGACTGTGTTCTTC...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGTGCTCCTCTGCAAGCTaGCCAACCCTGAGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVCSSAS*PTLSPD
Trigger: GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCA...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGTGCTCCTCTGCAAGCTaGCCAACCCTGAGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALCSSAS*PTLSPD
Trigger: GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCA...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCACAGGACCCAAGTTCTaGAAAGTTCTCTGTTCATCA +
Preference number: 4 (lower is better)
Translates to: PCNISTSLLLCKLANPEPTGPKF*KVLCSS
Trigger: TGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGT...GGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGCATATGGGGTGGGGATaGGTTGGGTACAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWHMGWG*VGYRRR
Trigger: CCTCCTCCTGTACCCAACCCATCCCCACCCCATATG...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp TGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGAATACAAAAATTAGCCTaGTGTGGTGGTGGGCGCCTA +
Preference number: 4 (lower is better)
Translates to: CNISTSLLLCKLANPEPRIQKLA*CGGGRL
Trigger: TAGGCGCCCACCACCACACCAGGCTAATTTTTGTAT...TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp TGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTCATGTGTTTTGTGCTTaGCCACGCTTCTGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: WEPCNISTSLLLCKLANPHVFCA*PRFCSK
Trigger: TTTGCTGCAGAAGCGTGGCCAAGCACAAAACACATG...AGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGCAGGCCGGACTGCAGTaGCGCAATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALQAGLQ*RNLGSL
Trigger: CAGTGAGCCAAGATTGCGCCACTGCAGTCCGGCCTG...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp TGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACCTCAGCCTCCCAAGTaGCTAAGACTTAACAAACAG +
Preference number: 4 (lower is better)
Translates to: CNISTSLLLCKLANPEPRPQPPK*LRLNKQ
Trigger: CTGTTTGTTAAGTCTTAGCCACTTGGGAGGCTGAGG...TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp ACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCGGAAAGGGCCTCTGCTaGCTGCAGGTGATCATCTTG +
Preference number: 4 (lower is better)
Translates to: TEPRTYPCDLYKFPLALGGKGLC*LQVIIL
Trigger: CAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCC...GCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GACTGTGAGGGCTCAAATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGTGGGAACGTCACTCCTaGTGTGCATGTCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: DCEGSNTSPTHCMVLPKEWERHS*CACPDP
Trigger: AGGGTCTGGACATGCACACCAGGAGTGACGTTCCCA...CTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATTTGAGCCCTCACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTATGAGCTCCTCTCGCTaGAAGGCTGTAGCTCGAAAC +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTMSSSR*KAVARN
Trigger: GTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTCAT...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp AACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCAACACAGTCAATGGGTaGGTCCATGCAGATCTTACA +
Preference number: 4 (lower is better)
Translates to: NPAIFLLACSSASWPTLSNTVNG*VHADLT
Trigger: TGTAAGATCTGCATGGACTCACCCATTGACTGTGTT...GCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGAAGAACATACCCATGTaGTTTATACAAGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLKNIPM*FIQVPT
Trigger: AGTGGGAACTTGTATAAATCACATGGGTATGTTCTT...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp TGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTTCATTCAGTACCTCCTaGAAGCTCTTAAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: WEPCNISTSLLLCKLANPSFSTS*KLLSAL
Trigger: CAGAGCACTTAAGAGCTTTCAGGAGGTACTGAATGA...AGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp AACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCAAAGGGATGTCTTCATaGGCAAATCTGATTCCCCCA +
Preference number: 4 (lower is better)
Translates to: NPAIFLLACSSASWPTLSKGMSS*ANLIPP
Trigger: TGGGGGAATCAGATTTGCTCATGAAGACATCCCTTT...GCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTGTCATCACTGGGTGCTaGACAGGTCAGCTCCCTAGG +
Preference number: 4 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFVITGC*TGQLPR
Trigger: CCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGAC...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACCAGCTGCTGAGCAATTaGAATGAAGCTGGCACAACT +
Preference number: 4 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYQLLSN*NEAGTT
Trigger: AGTTGTGCCAGCTTCATTTCAATTGCTCAGCAGCTG...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp CTCTGTCTTAACATTTGCTCTCCAGGAACTTCAACAGCAGTCTGGCCAGAGAAGGCCACAGACAGCTGCTaGGCAATTGAAATGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LCLNICSPGTSTAVWPEKATDSC*AIEMKL
Trigger: CAGCTTCATTTCAATTGCTCAGCAGCTGTCTGTGGC...CTTCTCTGGCCAGACTGCTGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp CCTATGACTTTAGAACCCTCAGTTGCAGGTGTGCATGTTCCAGCCAACACTCCAGGAGCCATGTTCAGATaGGATCATCTCAGGAACCAA +
Preference number: 4 (lower is better)
Translates to: PMTLEPSVAGVHVPANTPGAMFR*DHLRNQ
Trigger: TTGGTTCCTGAGATGATCTCATCTGAACATGGCTCC...TGGAGTGTTGGCTGGAACATGCACACCTGCAACTGAGGGTTCTAAAGTCATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394597.7
CDS-3UTR TCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGTCTAGTTCCTGTGGCTaGGGTCGCTGGAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWSSSCG*GRWSHV
Trigger: AACATGGCTCCAGCGACCTCAGCCACAGGAACTAGA...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394597.7
CDS-3UTR TCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCGACAAAGCTGTCCTCTaGGTCAATAGACTGCTGATT +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTDKAVL*VNRLLI
Trigger: AATCAGCAGTCTATTGACTCAGAGGACAGCTTTGTC...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584655.5
CDS-3UTR GCA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATGAGCCCCACAGGACTTaGAGCTTGGTTCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDEPHRT*SLVPSL
Trigger: CAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTC...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACCTTCCTGGCCGTGTTTaGAAAGTGAGCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: EDRTQVLESSLFISYHHHLPGRV*KVSPTG
Trigger: TCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAG...GTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTAAGATCTCTTTCAGCTaGCGCACTGTCAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RGDMASCLTWFWEPCNISKISFS*RTVRPS
Trigger: TGAAGGCCTGACAGTGCGGCAGCTGAAAGAGATCTT...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTCAATGGGTGAGTCCATaGAGATCTTACACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVQWVSP*RSYTGS
Trigger: AGAACCTGTGTAAGATCTGCATGGACTCACCCATTG...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACAATGGGTGAGTCCATaGAGATCTTACACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KTGMLRGDMASCLTWFWEQWVSP*RSYTGS
Trigger: AGAACCTGTGTAAGATCTGCATGGACTCACCCATTG...TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCCAATGGGTGAGTCCATaGAGATCTTACACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTQWVSP*RSYTGS
Trigger: AGAACCTGTGTAAGATCTGCATGGACTCACCCATTG...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAATTCATTCATGCGCTTaGCACACTTGGTACAGGTTA +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQIHSCA*HTWYRL
Trigger: TAACCTGTACCAAGTGTGGCAAGCGCATGAATGAAT...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp TTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCAGGACCGGAAGACATaGACAGCTCGGATTACATAC +
Preference number: 4 (lower is better)
Translates to: FWEPCNISTSLLLCKLANQDRKT*TARITY
Trigger: GTATGTAATCCGAGCTGTGCATGTCTTCCGGTCCTG...GTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CAGTACCTCCTGAAAGCTCTTAAGTGCTCTGTCTTAACATTTGCTCTCCAGGAAACTAGCTTGCTCCTCTaGAAGCTGGCCAACCCTGAG +
Preference number: 4 (lower is better)
Translates to: QYLLKALKCSVLTFALQETSLLL*KLANPE
Trigger: CTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGT...TTCCTGGAGAGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAGGAGGTACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTATATTTCTACTAGCTTaGTCCTCTGCAAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WEPCNISTSLLLCKLANPIFLLA*SSASWP
Trigger: TGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATAT...AGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATCTGGGAAGACAGGCATaGTCAGGGGTGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYLGRQA*SGVTWH
Trigger: ATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAG...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp TCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTCACCCTGGCTGGAGTaGGGTGGCGATCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SVTIITPRSLNQEHTHVISPWLE*GGDQSS
Trigger: TGAGCTCTGATCGCCACCGCACTCCAGCCAGGGTGA...AATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTTCTGAACTCACTTGGTaGTTCAACCCAATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQASELTW*FNPIGL
Trigger: AAGACCAATTGGGTTGAAGCACCAAGTGAGTTCAGA...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATGCTCACTGCAACCTCTaGTTCCCGGGTTCACAAGCA +
Preference number: 4 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYAHCNL*FPGSQA
Trigger: TGCTTGTGAACCCGGGAAGCAGAGGTTGCAGTGAGC...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAATCCTCGATCCTTTATaGCCTTTTGGCAAGATTCCT +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQILDPL*PFGKIP
Trigger: AGGAATCTTGCCAAAAGGGCATAAAGGATCGAGGAT...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GTGACTACCACACTGGACAGTGCAGGTGTAGACGGAGTTCAGATCAGACTCCTGAAAGAACAGCTCCTGTaGTACCTGAGGCTGATTTAT +
Preference number: 4 (lower is better)
Translates to: VTTTLDSAGVDGVQIRLLKEQLL*YLRLIY
Trigger: ATAAATCAGCCTCAGGTAGCACAGGAGCTGTTCTTT...CAGGAGTCTGATCTGAACTCCGTCTACACCTGCACTGTCCAGTGTGGTAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GGCCCATTCCCTACTTGGCTCGAACAGGTCATGCAAAAATTTTTCTTACAGTCCACAGGACTTGCAGCTTaGTTCCAAGCCTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GPFPTWLEQVMQKFFLQSTGLAA*FQACWG
Trigger: TCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGT...GGACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR CCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTGGCCCATTCCCTACTTaGCTCGAACAGGTCATGCAA +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTGPFPT*LEQVMQ
Trigger: TTGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCC...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGGTAGCTCGAAACCGTTaGCAGAGAAGGCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVVARNR*QRRQRR
Trigger: CCGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTAC...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCAAGTCTGGGGACAAGGTaGAGGCACGAGTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PKFWKVLCSSVTIITPRSSLGTR*RHESCP
Trigger: AGGACAGGACTCGTGCCTCCACCTTGTCCCCAGACT...TGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACGAGACACATGGCCATTaGCCTGCTGATTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: FWEPCNISTSLLLCKLANETHGH*PADSPE
Trigger: TTCAGGAGAATCAGCAGGCCAATGGCCATGTGTCTC...GTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCTCTGAGTCAATAGACTaGGTCTCATCCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: WFWEPCNISTSLLLCKLASESID*VSSSAG
Trigger: ACCTGCTGAGGATGAGACCCAGTCTATTGACTCAGA...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp TGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAAGAACACAGTCAATaGGTGAGTCCATGCAGATCT +
Preference number: 4 (lower is better)
Translates to: WEPCNISTSLLLCKLANPEEHSQ*VSPCRS
Trigger: AGATCTGCATGGACTCACCCATTGACTGTGTTCTTC...AGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTGAAGTGCGCTTGCCACACTTaGTACAGGTTACCATGTGGC +
Preference number: 4 (lower is better)
Translates to: LYYSCIQKVPCISQGNLKCACHT*YRLPCG
Trigger: GCCACATGGTAACCTGTACCAAGTGTGGCAAGCGCA...CTTCAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACCAAGAGGTACACCCCTaGGAAGACAGGCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: EDRTQVLESSLFISYHHHQEVHP*EDRHAQ
Trigger: CTGAGCATGCCTGTCTTCCCAGGGGTGTACCTCTTG...GTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTACTTCAACAGCAGTCTaGCCAGAGAAGAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTTSTAV*PEKSTG
Trigger: GCCTGTGCTCTTCTCTGGCCAGACTGCTGTTGAAGT...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCATACAAAAATTAGCCTaGTGTGGTGGTGGGCGCCTA +
Preference number: 4 (lower is better)
Translates to: WFWEPCNISTSLLLCKLAIQKLA*CGGGRL
Trigger: TAGGCGCCCACCACCACACCAGGCTAATTTTTGTAT...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTCACCTACTCATTGCATaGTCCTTCCTAAAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVHLLIA*SFLKSL
Trigger: TAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTG...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCCTCCTGCAAAGGCTGTaGTTCAGAATCAAATCATCC +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTLLQRL*FRIKSS
Trigger: GGATGATTTGATTCTGAACCACAGCCTTTGCAGGAG...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTCTACATTGCCCAGGTTaGTCTCAAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RGDMASCLTWFWEPCNISLHCPG*SQTPEL
Trigger: GAGCTCAGGAGTTTGAGACCAACCTGGGCAATGTAG...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACCAACCCAATTGGTCTTaGGATTCATCCTTTACCTAC +
Preference number: 4 (lower is better)
Translates to: AIFLLACSSASWPTLSPDQPNWS*DSSFTY
Trigger: GTAGGTAAAGGATGAATCCCAAGACCAATTGGGTTG...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GCCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAAATATCTGAACTCACTTaGTGCTTCAACCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: ANPEPRHPRLFPCKALKKISELT*CFNPIG
Trigger: ACCAATTGGGTTGAAGCACCAAGTGAGTTCAGATAT...TTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGACTTTTCCCTGCTCCTTaGGCGCCTGGTCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ESSLFISYHHHSKITEPRLFPAP*APGQGG
Trigger: ACCTCCCTGACCAGGCGCCCAAGGAGCAGGGAAAAG...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCTACATGCTGCTGGCTaGCATCAAGCAGAGGTCATC +
Preference number: 4 (lower is better)
Translates to: REEDRTQVLESSLFISYHLHAAG*HQAEVI
Trigger: GATGACCTCTGCTTGATGCCAGCCAGCAGCATGTAG...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 72 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTaGACCTGGTTTTGGGAACCCTGCAATATTTCTACT +
Preference number: 4 (lower is better)
Translates to: KTGMLRGDMASC*TWFWEPCNIST
Trigger: AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp CACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCAGCCGTGTTTGCAAAGTaGGCCCCACAGGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: HSKITEPRTYPCDLYKFPAVFAK*APQDLQ
Trigger: CTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGGC...TGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTTCACCTTCATCTTCATaGGCTCCTCTCGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTSPSSS*APLAER
Trigger: CCTTTCAGCGAGAGGAGCTCATGAAGATGAAGGTGA...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp ACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCAGCAGCCCTTGTAGTTaGCAAAGTTGCGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: TEPRTYPCDLYKFPLALGSSPCS*QSCEPR
Trigger: TCTTGGCTCGCAACTTTGTCAACTACAAGGGCTGCT...GCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACACAGTCAATGGGTaGGTCCATGCAGATCTTACA +
Preference number: 4 (lower is better)
Translates to: WFWEPCNISTSLLLCKLANTVNG*VHADLT
Trigger: TGTAAGATCTGCATGGACTCACCCATTGACTGTGTT...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTAGGCATGCTCAGGGGTaGCATGGCATCTTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFRHAQG*HGILLD
Trigger: GTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCT...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp CAGTACCTCCTGAAAGCTCTTAAGTGCTCTGTCTTAACATTTGCTCTCCAGGAAGGGGAGGAGGACTTCTaGTTGATGAAACACATGGGC +
Preference number: 4 (lower is better)
Translates to: QYLLKALKCSVLTFALQEGEEDF*LMKHMG
Trigger: GCCCATGTGTTTCATCAATCAGAAGTCCTCCTCCCC...TTCCTGGAGAGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAGGAGGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGGGCAGGAGAATAGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVGRRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCC...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCAACACTCTGCTTTCCTaGTCATGTGTTTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTNTLLS*SCVLCL
Trigger: CAAGCACAAAACACATGATCAGGAAAGCAGAGTGTT...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCTGCCATCCAGAGTCATaGTTGGTTCTAGTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: WFWEPCNISTSLLLCKLACHPES*LVLVSD
Trigger: ATCTGAGACTAGAACCAATCATGACTCTGGATGGCA...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp TTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCTTCATGAGCAAATCTaGTTCCCCCAACTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: FWEPCNISTSLLLCKLANLHEQI*FPQLLQ
Trigger: TTGCAGGAGTTGGGGGAATCAGATTTGCTCATGAAG...GTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATTCTCCCAGGGTAACCTaGAGACCTAACTGGGCATAC +
Preference number: 4 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYSPRVT*RPNWAY
Trigger: GTATGCCCAGTTAGGTCTTCAGGTTACCCTGGGAGA...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATGTCATCACTGGGTGCTaGACAGGTCAGCTCCCTAGG +
Preference number: 4 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDVITGC*TGQLPR
Trigger: CCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGAC...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAGAGGCCTCCCTCTTCTaGACCTCTACATGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESSLFISYHHHSKITEPREASLF*TSTCCW
Trigger: CCAGCAGCATGTAGAGGTTCAGAAGAGGGAGGCCTC...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp TTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACAATCCTTCCAGCTCTTaGGGGTCAGTTCTCACCTTA +
Preference number: 4 (lower is better)
Translates to: FWEPCNISTSLLLCKLANNPSSS*GSVLTL
Trigger: TAAGGTGAGAACTGACCCTCAAGAGCTGGAAGGATT...GTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp CTCTGTCTTAACATTTGCTCTCCAGGAACTTCAACAGCAGTCTGGCCAGAGAAGCAGCTGCTGAGCAATTaGAATGAAGCTGGCACAACT +
Preference number: 4 (lower is better)
Translates to: LCLNICSPGTSTAVWPEKQLLSN*NEAGTT
Trigger: AGTTGTGCCAGCTTCATTTCAATTGCTCAGCAGCTG...CTTCTCTGGCCAGACTGCTGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp TTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACTCTTCACTCAGGGCTTaGACATTCCTTCCCAAACTC +
Preference number: 4 (lower is better)
Translates to: FWEPCNISTSLLLCKLANSSLRA*TFLPKL
Trigger: GAGTTTGGGAAGGAATGTTCAAGCCCTGAGTGAAGA...GTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415395.6
CDS-3UTR TCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACTACGACTGCACAGCTTaGATGTCCCATCAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYYDCTA*MSHQGN
Trigger: ATTACCTTGATGGGACATTCAAGCTGTGCAGTCGTA...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447669.6
CDS-3UTR GCA 90 bp TTGGGTACAGGAGGAGGGGTGAAACTGTCTAGGTTCAGGGAGGAAGACAGGACCGGCTCGAACAGGTCATaGAAAAATTTTTCTTACAGT +
Preference number: 4 (lower is better)
Translates to: LGTGGGVKLSRFREEDRTGSNRS*KNFSYS
Trigger: ACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCC...GGTCCTGTCTTCCTCCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTACCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGTGGGAGATTACAGGCTaGTGGCCAAGGACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALWEITG*WPRTKS
Trigger: GCTCTTGGTCCTTGGCCAGCAGCCTGTAATCTCCCA...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCATGGGTCAGGAAGGCCTaGTGCTCAGGAAAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: HSKITEPRTYPCDLYKFPWVRKA*CSGKSG
Trigger: CCCAGACTTTCCTGAGCAGCAGGCCTTCCTGACCCA...TGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp TCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTGGGTCAGGAAGGCCTaGTGCTCAGGAAAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SVTIITPRSLNQEHTHVIWVRKA*CSGKSG
Trigger: CCCAGACTTTCCTGAGCAGCAGGCCTTCCTGACCCA...AATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp ACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCAAGATCTCTTTCAGCTaGCGCACTGTCAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TEPRTYPCDLYKFPLALGKISFS*RTVRPS
Trigger: TGAAGGCCTGACAGTGCGGCAGCTGAAAGAGATCTT...GCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAAATTCATTCATGCGCTTaGCACACTTGGTACAGGTTA +
Preference number: 4 (lower is better)
Translates to: KTGMLRGDMASCLTWFWEIHSCA*HTWYRL
Trigger: TAACCTGTACCAAGTGTGGCAAGCGCATGAATGAAT...TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTACTAGCTTGCTCCTCTaGAAGCTGGCCAACCCTGAG +
Preference number: 4 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFTSLLL*KLANPE
Trigger: CTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGT...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTTGGTTTTGGGAACCCTaGAATATTTCTACTAGCTTG +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAWFWEP*NISTSL
Trigger: CAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACGAAAATGGTTTCTCCTaGTGGGTGTGGTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: EDRTQVLESSLFISYHHHENGFS*WVWWLT
Trigger: CGTGAGCCACCACACCCAGCAGGAGAAACCATTTTC...GTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp ATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACCCCATACACATTTGGGTTTaGTTTAACCTCCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: ISTSLLLCKLANPEPRHPIHIWV*FNLQVS
Trigger: ACTTACTTGGAGGTTAAAGCAAACCCAAATGTGTAT...GGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGATACACATTTGGGTTTaGTTTAACCTCCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLIHIWV*FNLQVS
Trigger: ACTTACTTGGAGGTTAAAGCAAACCCAAATGTGTAT...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp AACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCTCTGAACTCACTTGGTaGTTCAACCCAATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: NPAIFLLACSSASWPTLSSELTW*FNPIGL
Trigger: AAGACCAATTGGGTTGAAGCACCAAGTGAGTTCAGA...GCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp ATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACACCCCTTTCATGTATTTCAATaGAGCCCTCAACATCATCAT +
Preference number: 4 (lower is better)
Translates to: ISTSLLLCKLANPEPRHPFHVFQ*SPQHHH
Trigger: ATGATGATGTTGAGGGCTGCATTGAAATACATGAAA...GGGGTGTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCAACACTCCACTCTGAGTaGAGGCTCATCAGGACACCA +
Preference number: 4 (lower is better)
Translates to: GRQDPSSGKFSVHQLPSSTLHSE*RLIRTP
Trigger: TGGTGTCCTGATGAGCCTGCACTCAGAGTGGAGTGT...TGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATTACCACACTGGACAGTaGAGGTGTAGACGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: REEDRTQVLESSLFISYHYHTGQ*RCRRSS
Trigger: TGAACTCCGTCTACACCTGCACTGTCCAGTGTGGTA...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCCAGATCCATACAACCTaGTTACAAAGAACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTQIHTT*LQRTAP
Trigger: AGGAGCTGTTCTTTGTAAGCAGGTTGTATGGATCTG...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGAGCTGTACCCAGGGTTaGAATAGGCCTGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVSCTQG*NRPASW
Trigger: CCAGGATGCAGGCCTATTCCAACCCTGGGTACAGCT...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTGGTTCCAAGCCTGTTaGGGAAGGGAAGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: EDRTQVLESSLFISYHHHWFQAC*GREGAV
Trigger: TACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCA...GTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CAGTACCTCCTGAAAGCTCTTAAGTGCTCTGTCTTAACATTTGCTCTCCAGGAAGGCCCATTCCCTACTTaGCTCGAACAGGTCATGCAA +
Preference number: 4 (lower is better)
Translates to: QYLLKALKCSVLTFALQEGPFPT*LEQVMQ
Trigger: TTGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCC...TTCCTGGAGAGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAGGAGGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp TCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTGTAGCTCGAAACCGTTaGCAGAGAAGGCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SVTIITPRSLNQEHTHVIVARNR*QRRQRR
Trigger: CCGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTAC...AATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAAAGTCTGGGGACAAGGTaGAGGCACGAGTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: VLESSLFISYHHHSKITESLGTR*RHESCP
Trigger: AGGACAGGACTCGTGCCTCCACCTTGTCCCCAGACT...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTGAGACACATGGCCATTaGCCTGCTGATTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTETHGH*PADSPE
Trigger: TTCAGGAGAATCAGCAGGCCAATGGCCATGTGTCTC...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp ACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCGAGACACATGGCCATTaGCCTGCTGATTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TEPRTYPCDLYKFPLALGETHGH*PADSPE
Trigger: TTCAGGAGAATCAGCAGGCCAATGGCCATGTGTCTC...GCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp CCTATGACTTTAGAACCCTCAGTTGCAGGTGTGCATGTTCCAGCCAACACTCCAGAAGAACACAGTCAATaGGTGAGTCCATGCAGATCT +
Preference number: 4 (lower is better)
Translates to: PMTLEPSVAGVHVPANTPEEHSQ*VSPCRS
Trigger: AGATCTGCATGGACTCACCCATTGACTGTGTTCTTC...TGGAGTGTTGGCTGGAACATGCACACCTGCAACTGAGGGTTCTAAAGTCATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGTGCGCTTGCCACACTTaGTACAGGTTACCATGTGGC +
Preference number: 4 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWCACHT*YRLPCG
Trigger: GCCACATGGTAACCTGTACCAAGTGTGGCAAGCGCA...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGAACAGGACCCAAGTTCTaGAAAGTTCTCTGTTCATCA +
Preference number: 4 (lower is better)
Translates to: CNISTSLLLCKLANPEPRTGPKF*KVLCSS
Trigger: TGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGT...TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp AACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCACAGGACCCAAGTTCTaGAAAGTTCTCTGTTCATCA +
Preference number: 4 (lower is better)
Translates to: NPAIFLLACSSASWPTLSTGPKF*KVLCSS
Trigger: TGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGT...GCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGCAAGCATCTCCCATATaGGGTGGGGATGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALQASPI*GGDGLG
Trigger: ACCCAACCCATCCCCACCCCATATGGGAGATGCTTG...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp TTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCATGTGTTTTGTGCTTaGCCACGCTTCTGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: FWEPCNISTSLLLCKLANHVFCA*PRFCSK
Trigger: TTTGCTGCAGAAGCGTGGCCAAGCACAAAACACATG...GTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATTTGACCAAGGTCACTTaGCCCAACCACAGGCTAATC +
Preference number: 4 (lower is better)
Translates to: REEDRTQVLESSLFISYHLTKVT*PNHRLI
Trigger: GATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAA...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAATTATTCCATCCTCTATaGAGACAAAAAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQLFHPL*RQKAAP
Trigger: AGGAGCAGCTTTTTGTCTCCATAGAGGATGGAATAA...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGTCACCTTCATCTTCATaGGCTCCTCTCGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWSPSSS*APLAER
Trigger: CCTTTCAGCGAGAGGAGCTCATGAAGATGAAGGTGA...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACACATGGCATCTTGCTTaGCCTGGTTTTGGGAACCCT +
Preference number: 4 (lower is better)
Translates to: EDRTQVLESSLFISYHHHTWHLA*PGFGNP
Trigger: AGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGT...GTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATAGGCATGCTCAGGGGTaGCATGGCATCTTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDRHAQG*HGILLD
Trigger: GTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCT...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATAGGCATGCTCAGGGGTaGCATGGCATCTTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHRHAQG*HGILLD
Trigger: GTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCT...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp TGCTTTCTCCCTGACCTGCCCCCAAAAATCAGTGGGCTAGGAAAGGGAATGAAATGGGAAATAAAGACTTaGACTGTCGGCTTACAACAG +
Preference number: 4 (lower is better)
Translates to: CFLPDLPPKISGLGKGMKWEIKT*TVGLQQ
Trigger: CTGTTGTAAGCCGACAGTTCAAGTCTTTATTTCCCA...TTTCATTCCCTTTCCTAGCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATGGCAGGAGAATAGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDGRRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCC...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACAACACTCTGCTTTCCTaGTCATGTGTTTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYNTLLS*SCVLCL
Trigger: CAAGCACAAAACACATGATCAGGAAAGCAGAGTGTT...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACGGCCCAGTGTTCAGTTaGCTAGTTTATGCAGTTATT +
Preference number: 4 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYGPVFS*LVYAVI
Trigger: AATAACTGCATAAACTAGTCAACTGAACACTGGGCC...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp TTTGGTCCAAAGAAACAAATGGATTTAGGCAATGTAGCAAGAGACTTTAGCAAAGTGGTCTCGATCTCCTaGCCTCGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: FGPKKQMDLGNVARDFSKVVSIS*PRDLPA
Trigger: GGCGGGCAGATCACGAGGTCAGGAGATCGAGACCAC...TTTGCTAAAGTCTCTTGCTACATTGCCTAAATCCATTTGTTTCTTTGGACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTGCCAACACTCCACTCTaGGTGCAGGCTCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFANTPL*VQAHQD
Trigger: GTCCTGATGAGCCTGCACTCAGAGTGGAGTGTTGGC...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp GGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCAGCCACAGACAGCTGCTaGGCAATTGAAATGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GRQDPSSGKFSVHQLPSSATDSC*AIEMKL
Trigger: CAGCTTCATTTCAATTGCTCAGCAGCTGTCTGTGGC...TGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTATAAAAATCCACACCTaGGAACAGATCCATACAACC +
Preference number: 4 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVIKIHT*EQIHTT
Trigger: GGTTGTATGGATCTGTTCTCAGGTGTGGATTTTTAT...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCGTCTGGCAAGCAACTTaGACTCCTTTGAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: WFWEPCNISTSLLLCKLAVWQAT*TPLKLF
Trigger: AAACAGTTTCAAAGGAGTTCAAGTTGCTTGCCAGAC...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415395.6
CDS-3UTR GCA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTAGAGCCCCACAGGACTTaGAGCTTGGTTCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLEPHRT*SLVPSL
Trigger: CAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTC...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACTTCCTGGCCGTGTTTaGAAAGTGAGCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: VLESSLFISYHHHSKITELPGRV*KVSPTG
Trigger: TCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAG...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACAGTCCAAGCAGGTCTaGTTCCTGGCCGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: VLESSLFISYHHHSKITEQSKQV*FLAVFA
Trigger: TGCAAACACGGCCAGGAAGCAGACCTGCTTGGACTG...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGGCTCGAACAGGTCATaGAAAAATTTTTCTTACAGT +
Preference number: 4 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQGSNRS*KNFSYS
Trigger: ACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCC...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATTGGGAGATTACAGGCTaGTGGCCAAGGACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHWEITG*WPRTKS
Trigger: GCTCTTGGTCCTTGGCCAGCAGCCTGTAATCTCCCA...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATAAGATCTCTTTCAGCTaGCGCACTGTCAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYKISFS*RTVRPS
Trigger: TGAAGGCCTGACAGTGCGGCAGCTGAAAGAGATCTT...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTCAATGGGTGAGTCCATaGAGATCTTACACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RGDMASCLTWFWEPCNISQWVSP*RSYTGS
Trigger: AGAACCTGTGTAAGATCTGCATGGACTCACCCATTG...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp ACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTGGGACATTCATTCATaGGCTTGCCACACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: TEPRTYPCDLYKFPLALGWDIHS*ACHTWY
Trigger: GTACCAAGTGTGGCAAGCGCATGAATGAATGTCCCA...GCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTAGAGCACAGGCTCTTTaGCTAAATCTATTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQARAQAL*LNLFLQ
Trigger: TTGAAGAAATAGATTTAGGCAAAGAGCCTGTGCTCT...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACTCTGTCTTAACATTTaGTCTCCAGGAACTTCAACA +
Preference number: 4 (lower is better)
Translates to: CNISTSLLLCKLANPEPRLCLNI*SPGTST
Trigger: TGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG...TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATGAAAATGGTTTCTCCTaGTGGGTGTGGTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDENGFS*WVWWLT
Trigger: CGTGAGCCACCACACCCAGCAGGAGAAACCATTTTC...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTGGCCACGCTTCTaGAGCAAACTCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWAWPRF*SKLLSP
Trigger: AGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGC...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp GAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACGATTCCCCCAACTCCTaGAAAGGCTGTGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: EDRTQVLESSLFISYHHHDSPNS*KGCGSE
Trigger: TTCTGAACCACAGCCTTTGCAGGAGTTGGGGGAATC...GTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTCTTAGTGTGTGTTATTaGCATTTCAATGTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQALSVCY*HFNVSG
Trigger: ACCACTGACATTGAAATGGCAATAACACACACTAAG...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCATCTTGTCCCTTCTCTaGCTTAGTGTGTGTTATTGC +
Preference number: 4 (lower is better)
Translates to: WFWEPCNISTSLLLCKLAILSLL*LSVCYC
Trigger: GCAATAACACACACTAAGGCAGAGAAGGGACAAGAT...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACAGGAAAGGGCCTCTaGTGGCTGCAGGTGATCATC +
Preference number: 4 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHTGKGL*WLQVII
Trigger: GATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGT...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATAGCTGTACCCAGGGTTaGAATAGGCCTGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDSCTQG*NRPASW
Trigger: CCAGGATGCAGGCCTATTCCAACCCTGGGTACAGCT...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTTGGTTCCAAGCCTGTTaGGGAAGGGAAGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFWFQAC*GREGAV
Trigger: TACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCA...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGTGGTTCCAAGCCTGTTaGGGAAGGGAAGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALWFQAC*GREGAV
Trigger: TACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCA...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCAACAGGACTTGCAGCTTaGTTCCAAGCCTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PKFWKVLCSSVTIITPRSTGLAA*FQACWG
Trigger: TCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGT...TGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGACAAGAGGTACACCCCTaGGAAGACAGGCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: ESSLFISYHHHSKITEPRQEVHP*EDRHAQ
Trigger: CTGAGCATGCCTGTCTTCCCAGGGGTGTACCTCTTG...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTATTTTCAGCGAAAAGTaGCTTAAGACTTCTAGTTGG +
Preference number: 4 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAIFSEK*LKTSSW
Trigger: CCAACTAGAAGTCTTAAGCCACTTTTCGCTGAAAAT...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp GGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTATATCTGAACTCACTTaGTGCTTCAACCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: GCKLAAMSQSFQLLRVSSISELT*CFNPIG
Trigger: ACCAATTGGGTTGAAGCACCAAGTGAGTTCAGATAT...AGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCCAGTTTACAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATTGCTCCTTGGGCGCCTaGTCAGGGAGGTTTGTACAA +
Preference number: 4 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHCSLGA*SGRFVQ
Trigger: TTGTACAAACCTCCCTGACCAGGCGCCCAAGGAGCA...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAATGCTCCTTGGGCGCCTaGTCAGGGAGGTTTGTACAA +
Preference number: 4 (lower is better)
Translates to: VLESSLFISYHHHSKITECSLGA*SGRFVQ
Trigger: TTGTACAAACCTCCCTGACCAGGCGCCCAAGGAGCA...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp CCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCAAGCAGAGGTCATCACTaGGTGCTGAACAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PKFWKVLCSSVTIITPRSSRGHH*VLNRSA
Trigger: AGCTGACCTGTTCAGCACCCAGTGATGACCTCTGCT...TGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTCATATGGTTGTAAACTaGCTGCCATGTCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: RGDMASCLTWFWEPCNISHMVVN*LPCPNP
Trigger: AGGATTGGGACATGGCAGCCAGTTTACAACCATATG...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 72 bp GTCTCCTCACTCCCCACCAACCTGGGAAATAAAGACTaGAACTGTCGGCTTACAACAGAATCCAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: VSSLPTNLGNKD*NCRLTTESSLI
Trigger: AATGAGACTGGATTCTGTTGTAAGCCGACAGTTCAAGTCTTTATTTCCCAGGTTGGTGGGGAGTGAGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR CAA 72 bp GGAGGGGTTTACTTTCCTGACTCTAGCCCAGGACATTaGGTGTTTTTGAATAGGCACCATTCAGCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GGVYFPDSSPGH*VFLNRHHSALL
Trigger: AAGCAAGGCTGAATGGTGCCTATTCAAAAACACCAAATGTCCTGGGCTAGAGTCAGGAAAGTAAACCCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGAGCAGCCCTTGTAGTTaGCAAAGTTGCGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALSSPCS*QSCEPR
Trigger: TCTTGGCTCGCAACTTTGTCAACTACAAGGGCTGCT...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAATGCTGGAGTCCTTTCTaGTCCTTGTATAGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: VLESSLFISYHHHSKITECWSPF*SLYSRV
Trigger: GACCCGGCTATACAAGGATCAGAAAGGACTCCAGCA...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGATGCTGGAGTCCTTTCTaGTCCTTGTATAGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: ESSLFISYHHHSKITEPRCWSPF*SLYSRV
Trigger: GACCCGGCTATACAAGGATCAGAAAGGACTCCAGCA...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTAACACAGTCAATGGGTaGGTCCATGCAGATCTTACA +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTNTVNG*VHADLT
Trigger: TGTAAGATCTGCATGGACTCACCCATTGACTGTGTT...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATTTCCCTGTAAGGCACTaGAGAAACCGATGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDFPVRH*RNRCKL
Trigger: GAGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAA...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTAGTACAGGAGGAGGGGTaGAACTGTCTAGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLVQEEG*NCLGSG
Trigger: CCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTAC...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAGGGGAGGAGGACTTCTaGTTGATGAAACACATGGGC +
Preference number: 4 (lower is better)
Translates to: ESSLFISYHHHSKITEPRGEEDF*LMKHMG
Trigger: GCCCATGTGTTTCATCAATCAGAAGTCCTCCTCCCC...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATAGCAGTTTGGGAGCCTaGTGTTTTGTTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDSSLGA*CFVGSQ
Trigger: CTGGGAGCCAACAAAACATCAGGCTCCCAAACTGCT...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAAAGCAGTTTGGGAGCCTaGTGTTTTGTTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLESSLFISYHHHSKITESSLGA*CFVGSQ
Trigger: CTGGGAGCCAACAAAACATCAGGCTCCCAAACTGCT...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATTGGGCCAACCTTTTCTaGGCCATAGTCCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHWANLF*AIVQLY
Trigger: GTACAGCTGGACTATGGCTCAGAAAAGGTTGGCCCA...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCCCCCAACTTTGATCTaGTTGACTTTGGCTTCCACC +
Preference number: 4 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDPPTLI*LTLAST
Trigger: GGTGGAAGCCAAAGTCAATCAGATCAAAGTTGGGGG...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp ATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTGCCAACACTCCACTCTaGGTGCAGGCTCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: IITPRSLNQEHTHVIYTSANTPL*VQAHQD
Trigger: GTCCTGATGAGCCTGCACTCAGAGTGGAGTGTTGGC...ACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp CATGTGTTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTATAAAAATCCACACCTaGGAACAGATCCATACAACC +
Preference number: 4 (lower is better)
Translates to: HVFCAWPRFCSKLLSPPAIKIHT*EQIHTT
Trigger: GGTTGTATGGATCTGTTCTCAGGTGTGGATTTTTAT...AGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAACACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp CTACTTGGCTCGAACAGGTCATGCAAAAATTTTTCTTACAGTCCAAGCAGGTCTTCAAGGACCTGGGTTTaGATCCCGGCTCTGTCATTT +
Preference number: 4 (lower is better)
Translates to: LLGSNRSCKNFSYSPSRSSRTWV*IPALSF
Trigger: AAATGACAGAGCCGGGATTCAAACCCAGGTCCTTGA...AGACCTGCTTGGACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCCAAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR TCA 90 bp TATTTTAATCATTGCCATGCTTTTCTAGGCACCCAGGCCTGTAACTGTCATCTTTTCTACTCGACATGCTaGATGTCTTCTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: YFNHCHAFLGTQACNCHLFYSTC*MSSGRG
Trigger: GCCCCTCCCAGAAGACATTCAGCATGTCGAGTAGAA...AAGATGACAGTTACAGGCCTGGGTGCCTAGAAAAGCATGGCAATGATTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR GCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATATATTTCTACTAGCTTaGTCCTCTGCAAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: REEDRTQVLESSLFISYHIFLLA*SSASWP
Trigger: TGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATAT...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp AACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCAATGGGAAAACACTCTaGTTTCCTGATCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: NPAIFLLACSSASWPTLSNGKTL*FPDHVF
Trigger: AAACACATGATCAGGAAAGCAGAGTGTTTTCCCATT...GCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TGCTTTCTCCCTGACCTGCCCCCAAAAATCAGTGGGCTAGGAAAGGGAATGAAAAAGGCGTTTAGGGTTTaGATAGTTCATCCATTGGTA +
Preference number: 4 (lower is better)
Translates to: CFLPDLPPKISGLGKGMKKAFRV*IVHPLV
Trigger: TACCAATGGATGAACTATGCAAACCCTAAACGCCTT...TTTCATTCCCTTTCCTAGCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATGATTCCCCCAACTCCTaGAAAGGCTGTGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDDSPNS*KGCGSE
Trigger: TTCTGAACCACAGCCTTTGCAGGAGTTGGGGGAATC...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TTTGGTCCAAAGAAACAAATGGATTTAGGCAATGTAGCAAGAGACTTTAGCAAATCACCCTGGCTGGAGTaGGGTGGCGATCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: FGPKKQMDLGNVARDFSKSPWLE*GGDQSS
Trigger: TGAGCTCTGATCGCCACCGCACTCCAGCCAGGGTGA...TTTGCTAAAGTCTCTTGCTACATTGCCTAAATCCATTTGTTTCTTTGGACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp TGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACTTAGTGTGTGTTATTaGCATTTCAATGTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CNISTSLLLCKLANPEPRLSVCY*HFNVSG
Trigger: ACCACTGACATTGAAATGGCAATAACACACACTAAG...TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACGGACCCAGCCCCACTTaGCCTTATTGGTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNGPSPT*PYWLLT
Trigger: TGTAAGCAACCAATAAGGGCAAGTGGGGCTGGGTCC...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACACAGGACTTGCAGCTTaGTTCCAAGCCTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNTGLAA*FQACWG
Trigger: TCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGT...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp ATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTCCTCAGCAGGTACTCTaGCCACGCTCTCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: IITPRSLNQEHTHVIYTSPQQVL*PRSPGR
Trigger: TCTACCTGGAGAGCGTGGCCAGAGTACCTGCTGAGG...ACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CCA 90 bp GACTGTGAGGGCTCAAATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGGAAGAACACAGTCAATaGGTGAGTCCATGCAGATCT +
Preference number: 4 (lower is better)
Translates to: DCEGSNTSPTHCMVLPKEEEHSQ*VSPCRS
Trigger: AGATCTGCATGGACTCACCCATTGACTGTGTTCTTC...CTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATTTGAGCCCTCACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAATATACAAGTTCCCACTaGCCTTGGGCTTTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VLESSLFISYHHHSKITEYTSSH*PWALPA
Trigger: GGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATA...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTATTTTCAGCGAAAAGTaGCTTAAGACTTCTAGTTGG +
Preference number: 4 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVIFSEK*LKTSSW
Trigger: CCAACTAGAAGTCTTAAGCCACTTTTCGCTGAAAAT...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTCACCTACTCATTGCATaGTCCTTCCTAAAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTHLLIA*SFLKSL
Trigger: TAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTG...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTGCAGTCTTCCCACCTTaGCCTCCTAAAGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFAVFPP*PPKVWK
Trigger: TTTCCACACTTTAGGAGGCCAAGGTGGGAAGACTGC...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTGTGAGCAAAGTGTTGTaGCTCATCCTCGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTVSKVL*LILDPL
Trigger: TAAAGGATCGAGGATGAGCCACAACACTTTGCTCAC...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCCAAATTAACAGGCTCTaGACCTATAAGATCAAGGAC +
Preference number: 4 (lower is better)
Translates to: WFWEPCNISTSLLLCKLAQINRL*TYKIKD
Trigger: GTCCTTGATCTTATAGGTCCAGAGCCTGTTAATTTG...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTAATGAGCTCCTCTCGCTaGAAGGCTGTAGCTCGAAAC +
Preference number: 4 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLMSSSR*KAVARN
Trigger: GTTTCGAGCTACAGCCTTTCAGCGAGAGGAGCTCAT...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGATCACCTTCATCTTCATaGGCTCCTCTCGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: ESSLFISYHHHSKITEPRSPSSS*APLAER
Trigger: CCTTTCAGCGAGAGGAGCTCATGAAGATGAAGGTGA...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp ATTCCCTACTTGGCTCGAACAGGTCATGCAAAAATTTTTCTTACAGTCCAAGCATCACCTTCATCTTCATaGGCTCCTCTCGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: IPYLARTGHAKIFLTVQASPSSS*APLAER
Trigger: CCTTTCAGCGAGAGGAGCTCATGAAGATGAAGGTGA...TGCTTGGACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCCAAGTAGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR TCA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATAGCAGCCCTTGTAGTTaGCAAAGTTGCGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHSSPCS*QSCEPR
Trigger: TCTTGGCTCGCAACTTTGTCAACTACAAGGGCTGCT...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp CATGTGTTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTAAGAACATACCCATGTaGTTTATACAAGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: HVFCAWPRFCSKLLSPPAKNIPM*FIQVPT
Trigger: AGTGGGAACTTGTATAAATCACATGGGTATGTTCTT...AGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAACACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGCTTCATGAGCAAATCTaGTTCCCCCAACTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALLHEQI*FPQLLQ
Trigger: TTGCAGGAGTTGGGGGAATCAGATTTGCTCATGAAG...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp CCTATGACTTTAGAACCCTCAGTTGCAGGTGTGCATGTTCCAGCCAACACTCCAGAAACAAGTCTTAACTaGAATCTCAGAGTAATCAGC +
Preference number: 4 (lower is better)
Translates to: PMTLEPSVAGVHVPANTPETSLN*NLRVIS
Trigger: GCTGATTACTCTGAGATTTCAGTTAAGACTTGTTTC...TGGAGTGTTGGCTGGAACATGCACACCTGCAACTGAGGGTTCTAAAGTCATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTCTCCCTAGGGCAATGTaGGCAAAGTGTTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFLPRAM*AKCCGS
Trigger: TGAGCCACAACACTTTGCTCACATTGCCCTAGGGAG...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGAATCCTTCCAGCTCTTaGGGGTCAGTTCTCACCTTA +
Preference number: 4 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVNPSSS*GSVLTL
Trigger: TAAGGTGAGAACTGACCCTCAAGAGCTGGAAGGATT...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGGACTGTGCATTCTCTaGAGATTATTGTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWGLCIL*RLLCSQ
Trigger: CTGTGAGCACAATAATCTTCAGAGAATGCACAGTCC...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447669.6
CDS-3UTR GCA 90 bp ATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTCAGTCCAAGCAGGTCTaGTTCCTGGCCGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: IITPRSLNQEHTHVIYTSQSKQV*FLAVFA
Trigger: TGCAAACACGGCCAGGAAGCAGACCTGCTTGGACTG...ACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CAGTACCTCCTGAAAGCTCTTAAGTGCTCTGTCTTAACATTTGCTCTCCAGGAACAATGGGTGAGTCCATaGAGATCTTACACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QYLLKALKCSVLTFALQEQWVSP*RSYTGS
Trigger: AGAACCTGTGTAAGATCTGCATGGACTCACCCATTG...TTCCTGGAGAGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAGGAGGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAGAGCACAGGCTCTTTaGCTAAATCTATTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: WFWEPCNISTSLLLCKLARAQAL*LNLFLQ
Trigger: TTGAAGAAATAGATTTAGGCAAAGAGCCTGTGCTCT...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TGCTTTCTCCCTGACCTGCCCCCAAAAATCAGTGGGCTAGGAAAGGGAATGAAAAGAGCACAGGCTCTTTaGCTAAATCTATTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: CFLPDLPPKISGLGKGMKRAQAL*LNLFLQ
Trigger: TTGAAGAAATAGATTTAGGCAAAGAGCCTGTGCTCT...TTTCATTCCCTTTCCTAGCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCCTGAAAGCTCTTAAGTaGTCTGTCTTAACATTTGCT +
Preference number: 4 (lower is better)
Translates to: WFWEPCNISTSLLLCKLALKALK*SVLTFA
Trigger: AGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAG...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp CTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTGAAGACATCACCTACTCATTaGATGGTCCTTCCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: LYYSCIQKVPCISQGNLKTSPTH*MVLPKE
Trigger: CTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGT...CTTCAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp CATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACAATGGGAAAACACTCTaGTTTCCTGATCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: HVIYTSSHWPWALPAKRYNGKTL*FPDHVF
Trigger: AAACACATGATCAGGAAAGCAGAGTGTTTTCCCATT...GTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp ACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCGGCACCATTCAGCCTTaGTTCAGTATTAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: TEPRTYPCDLYKFPLALGGTIQP*FSIRNK
Trigger: CTTATTCCTAATACTGAAGCAAGGCTGAATGGTGCC...GCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATGGCACCATTCAGCCTTaGTTCAGTATTAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: REEDRTQVLESSLFISYHGTIQP*FSIRNK
Trigger: CTTATTCCTAATACTGAAGCAAGGCTGAATGGTGCC...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATTACCACACTGGACAGTaGAGGTGTAGACGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHYHTGQ*RCRRSS
Trigger: TGAACTCCGTCTACACCTGCACTGTCCAGTGTGGTA...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTTCTGAGTCAATAGACTaGGTCTCATCCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFSESID*VSSSAG
Trigger: ACCTGCTGAGGATGAGACCCAGTCTATTGACTCAGA...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp ACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTGCTTGACCTGGTTTTaGGAACCCTGCAATATTTCT +
Preference number: 4 (lower is better)
Translates to: TEPRTYPCDLYKFPLALGCLTWF*EPCNIS
Trigger: AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCA...GCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAAGCCTGATGTTTTGTTaGCTCCCAGAGTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: ESSLFISYHHHSKITEPRSLMFC*LPESGQ
Trigger: CTGACCTGACTCTGGGAGCCAACAAAACATCAGGCT...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCATGTGTTTTGTGCTTaGCCACGCTTCTGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDHVFCA*PRFCSK
Trigger: TTTGCTGCAGAAGCGTGGCCAAGCACAAAACACATG...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATGTGAGCAAAGTGTTGTaGCTCATCCTCGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYVSKVL*LILDPL
Trigger: TAAAGGATCGAGGATGAGCCACAACACTTTGCTCAC...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp GGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACATATGGTTGTAAACTaGCTGCCATGTCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: GRQDPSSGKFSVHQLPSSHMVVN*LPCPNP
Trigger: AGGATTGGGACATGGCAGCCAGTTTACAACCATATG...TGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAATTTGAAACTGTTTACTaGAATTTTCCAGCAAACCTG +
Preference number: 4 (lower is better)
Translates to: KTGMLRGDMASCLTWFWEFETVY*NFPANL
Trigger: CAGGTTTGCTGGAAAATTCCAGTAAACAGTTTCAAA...TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415395.6
3UTR CAA 72 bp TCTGCCAAGGCGTTTAGGGTTTGCATAGTTCATCCATaGGTAATGGGAAAACACTCTGCTTTCCTGATCATG +
Preference number: 4 (lower is better)
Translates to: SAKAFRVCIVHP*VMGKHSAFLIM
Trigger: CATGATCAGGAAAGCAGAGTGTTTTCCCATTACCAATGGATGAACTATGCAAACCCTAAACGCCTTGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
3UTR CAA 72 bp TGTGGAAATTATAGCATGAACCACTGTCAGGCTCTTTaGTCAGTCCTATCAACCTCTAACATCCTCGCACCA +
Preference number: 4 (lower is better)
Translates to: CGNYSMNHCQAL*SVLSTSNILAP
Trigger: TGGTGCGAGGATGTTAGAGGTTGATAGGACTGACAAAAGAGCCTGACAGTGGTTCATGCTATAATTTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 72 bp TATCTGAACTCACTTGGTGCTTCAACCCAATTGGTCTaGGGATTCATCCTTTACCTACCCAGCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: YLNSLGASTQLV*GFILYLPSSHS
Trigger: AGAATGAGAGCTGGGTAGGTAAAGGATGAATCCCAAGACCAATTGGGTTGAAGCACCAAGTGAGTTCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTTTCCCTGTAAGGCACTaGAGAAACCGATGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFFPVRH*RNRCKL
Trigger: GAGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAA...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp CCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCATGCCATCCAGAGTCATaGTTGGTTCTAGTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: PKFWKVLCSSVTIITPRSCHPES*LVLVSD
Trigger: ATCTGAGACTAGAACCAATCATGACTCTGGATGGCA...TGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGTGCCATCCAGAGTCATaGTTGGTTCTAGTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVCHPES*LVLVSD
Trigger: ATCTGAGACTAGAACCAATCATGACTCTGGATGGCA...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp CAGTACCTCCTGAAAGCTCTTAAGTGCTCTGTCTTAACATTTGCTCTCCAGGAAGGCCCAGTGTTCAGTTaGCTAGTTTATGCAGTTATT +
Preference number: 4 (lower is better)
Translates to: QYLLKALKCSVLTFALQEGPVFS*LVYAVI
Trigger: AATAACTGCATAAACTAGTCAACTGAACACTGGGCC...TTCCTGGAGAGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAGGAGGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATGAGGAACTGAGTAGCTaGATGAATGATCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYEELSS*MNDPLL
Trigger: TAGCAAAGGATCATTCATTCAGCTACTCAGTTCCTC...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp CTCTGTCTTAACATTTGCTCTCCAGGAACTTCAACAGCAGTCTGGCCAGAGAAGGAAACAAGTCTTAACTaGAATCTCAGAGTAATCAGC +
Preference number: 4 (lower is better)
Translates to: LCLNICSPGTSTAVWPEKETSLN*NLRVIS
Trigger: GCTGATTACTCTGAGATTTCAGTTAAGACTTGTTTC...CTTCTCTGGCCAGACTGCTGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCATCCAGTCTTTGCTGCTaGGATCTGACTGTATATACT +
Preference number: 4 (lower is better)
Translates to: GRQDPSSGKFSVHQLPSSSSLCC*DLTVYT
Trigger: AGTATATACAGTCAGATCTCAGCAGCAAAGACTGGA...TGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp CAGTACCTCCTGAAAGCTCTTAAGTGCTCTGTCTTAACATTTGCTCTCCAGGAATCCAGTCTTTGCTGCTaGGATCTGACTGTATATACT +
Preference number: 4 (lower is better)
Translates to: QYLLKALKCSVLTFALQESSLCC*DLTVYT
Trigger: AGTATATACAGTCAGATCTCAGCAGCAAAGACTGGA...TTCCTGGAGAGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAGGAGGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp TTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACGGCTCGAACAGGTCATaGAAAAATTTTTCTTACAGT +
Preference number: 4 (lower is better)
Translates to: FWEPCNISTSLLLCKLANGSNRS*KNFSYS
Trigger: ACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCC...GTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATTGGGACATTCATTCATaGGCTTGCCACACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHWDIHS*ACHTWY
Trigger: GTACCAAGTGTGGCAAGCGCATGAATGAATGTCCCA...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCATGGGACATTCATTCATaGGCTTGCCACACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: HSKITEPRTYPCDLYKFPWDIHS*ACHTWY
Trigger: GTACCAAGTGTGGCAAGCGCATGAATGAATGTCCCA...TGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACTGGGACATTCATTCATaGGCTTGCCACACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNWDIHS*ACHTWY
Trigger: GTACCAAGTGTGGCAAGCGCATGAATGAATGTCCCA...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATATATTTCTACTAGCTTaGTCCTCTGCAAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDIFLLA*SSASWP
Trigger: TGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATAT...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp CTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTGGTTTTGGGAACCCTaGAATATTTCTACTAGCTTG +
Preference number: 4 (lower is better)
Translates to: LNQEHTHVIYTSSHWPWAWFWEP*NISTSL
Trigger: CAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA...AGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACGGTGACATGGCATCTTaGTTGACCTGGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNGDMAS*LTWFWE
Trigger: TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAAGGTGACATGGCATCTTaGTTGACCTGGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: VLESSLFISYHHHSKITEGDMAS*LTWFWE
Trigger: TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTAAGGCGTTTAGGGTTTaGATAGTTCATCCATTGGTA +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTKAFRV*IVHPLV
Trigger: TACCAATGGATGAACTATGCAAACCCTAAACGCCTT...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTAGGTTTGTACAAGCCTaGGCACACACAGCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFRFVQA*AHTAVC
Trigger: ACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCT...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACATCTTGTCCCTTCTCTaGCTTAGTGTGTGTTATTGC +
Preference number: 4 (lower is better)
Translates to: EDRTQVLESSLFISYHHHILSLL*LSVCYC
Trigger: GCAATAACACACACTAAGGCAGAGAAGGGACAAGAT...GTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp ATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTCCTCAGTTGCAGGTGTaGATGTTCCAGCCAACACTC +
Preference number: 4 (lower is better)
Translates to: IITPRSLNQEHTHVIYTSPQLQV*MFQPTL
Trigger: GAGTGTTGGCTGGAACATGCACACCTGCAACTGAGG...ACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp CCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCAGAAGAACACAGTCAATaGGTGAGTCCATGCAGATCT +
Preference number: 4 (lower is better)
Translates to: PKFWKVLCSSVTIITPRSEEHSQ*VSPCRS
Trigger: AGATCTGCATGGACTCACCCATTGACTGTGTTCTTC...TGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGTGCTTGACCTGGTTTTaGGAACCCTGCAATATTTCT +
Preference number: 4 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWCLTWF*EPCNIS
Trigger: AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCA...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCTTAAGACTTCTAGTTaGGAAAAGGATCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: REEDRTQVLESSLFISYHLKTSS*EKDQKP
Trigger: TGGCTTCTGATCCTTTTCCCAACTAGAAGTCTTAAG...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGCAACCCAATTGGTCTTaGGATTCATCCTTTACCTAC +
Preference number: 4 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWQPNWS*DSSFTY
Trigger: GTAGGTAAAGGATGAATCCCAAGACCAATTGGGTTG...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
3UTR CAA 72 bp TGTAAATATCTGAACTCACTTGGTGCTTCAACCCAATaGGTCTTGGGATTCATCCTTTACCTACCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CKYLNSLGASTQ*VLGFILYLPSS
Trigger: AGAGCTGGGTAGGTAAAGGATGAATCCCAAGACCAATTGGGTTGAAGCACCAAGTGAGTTCAGATATTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAAAACACAGTCAATGGGTaGGTCCATGCAGATCTTACA +
Preference number: 4 (lower is better)
Translates to: VLESSLFISYHHHSKITENTVNG*VHADLT
Trigger: TGTAAGATCTGCATGGACTCACCCATTGACTGTGTT...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTAAGAACATACCCATGTaGTTTATACAAGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTKNIPM*FIQVPT
Trigger: AGTGGGAACTTGTATAAATCACATGGGTATGTTCTT...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAAAAGGGATGTCTTCATaGGCAAATCTGATTCCCCCA +
Preference number: 4 (lower is better)
Translates to: ESSLFISYHHHSKITEPRKGMSS*ANLIPP
Trigger: TGGGGGAATCAGATTTGCTCATGAAGACATCCCTTT...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATGAGGAACTGAGTAGCTaGATGAATGATCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDEELSS*MNDPLL
Trigger: TAGCAAAGGATCATTCATTCAGCTACTCAGTTCCTC...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GACTGTGAGGGCTCAAATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGTATTCCAATGTATTATaGACCAGTCAGCTATCTGTC +
Preference number: 4 (lower is better)
Translates to: DCEGSNTSPTHCMVLPKEYSNVL*TSQLSV
Trigger: GACAGATAGCTGACTGGTTCATAATACATTGGAATA...CTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATTTGAGCCCTCACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTGTTGTCCTGTTGTCCTaGGCAACATTATGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFVVLLS*ATLCKA
Trigger: TGCTTTACATAATGTTGCTCAGGACAACAGGACAAC...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGATTCATTCATGCGCTTaGCACACTTGGTACAGGTTA +
Preference number: 4 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALIHSCA*HTWYRL
Trigger: TAACCTGTACCAAGTGTGGCAAGCGCATGAATGAAT...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTGGTGACATGGCATCTTaGTTGACCTGGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFGDMAS*LTWFWE
Trigger: TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TTTGGTCCAAAGAAACAAATGGATTTAGGCAATGTAGCAAGAGACTTTAGCAAACAGCAGCAGGGATTATaGACGCACTATCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: FGPKKQMDLGNVARDFSKQQQGL*THYPLQ
Trigger: CTGCAAGGGATAGTGCGTGCATAATCCCTGCTGCTG...TTTGCTAAAGTCTCTTGCTACATTGCCTAAATCCATTTGTTTCTTTGGACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGACATCACCTACTCATTaGATGGTCCTTCCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVTSPTH*MVLPKE
Trigger: CTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGT...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TTTGGTCCAAAGAAACAAATGGATTTAGGCAATGTAGCAAGAGACTTTAGCAAAATCTCTCCAGCAGAATaGTGGAGGCCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FGPKKQMDLGNVARDFSKISPAE*WRPPSS
Trigger: AGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGAT...TTTGCTAAAGTCTCTTGCTACATTGCCTAAATCCATTTGTTTCTTTGGACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTCTTGCCCTTATTGGTTaGTTACACCCAGAGTGCACA +
Preference number: 4 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFLALIG*LHPECT
Trigger: TGTGCACTCTGGGTGTAAGCAACCAATAAGGGCAAG...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATTTAGAACCCTCAGTTaGAGGTGTGCATGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLFRTLS*RCACSS
Trigger: GCTGGAACATGCACACCTGCAACTGAGGGTTCTAAA...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGAAAACAGTGTCTAACTaGTGTCCTACAGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALKTVSN*CPTELA
Trigger: AGCAAGCTCTGTAGGACAGCAGTTAGACACTGTTTT...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415395.6
CDS-3UTR CCA 90 bp TCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTCACCTACTCATTGCATaGTCCTTCCTAAAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: SVTIITPRSLNQEHTHVIHLLIA*SFLKSL
Trigger: TAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTG...AATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp CACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTCCTGCAAAGGCTGTaGTTCAGAATCAAATCATCC +
Preference number: 4 (lower is better)
Translates to: HSKITEPRTYPCDLYKFPLLQRL*FRIKSS
Trigger: GGATGATTTGATTCTGAACCACAGCCTTTGCAGGAG...TGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp ACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCCCCAGGATTAGCTTGTaGTTTATCAGTTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: TEPRTYPCDLYKFPLALGPRISL*FISCQF
Trigger: AAATTGACAACTGATAAACCACAAGCTAATCCTGGG...GCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGCAAATTAACAGGCTCTaGACCTATAAGATCAAGGAC +
Preference number: 4 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWQINRL*TYKIKD
Trigger: GTCCTTGATCTTATAGGTCCAGAGCCTGTTAATTTG...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp TATTTTAATCATTGCCATGCTTTTCTAGGCACCCAGGCCTGTAACTGTCATCTTATGCTGAATGTCTTCTaGGAGGGGCTTTGGAATCAA +
Preference number: 4 (lower is better)
Translates to: YFNHCHAFLGTQACNCHLMLNVF*EGLWNQ
Trigger: TTGATTCCAAAGCCCCTCCCAGAAGACATTCAGCAT...AAGATGACAGTTACAGGCCTGGGTGCCTAGAAAAGCATGGCAATGATTAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581265.1
3UTR CAA 72 bp TTCCATCCTCTATGGAGACAAAAAGCTGCTCCTCCTTaGAGTACTGACCTACATAGATTTCCATTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FHPLWRQKAAPP*STDLHRFPFLS
Trigger: AGAGAGAAATGGAAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGGATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTGGGAAATAAAGACTTaGACTGTCGGCTTACAACAG +
Preference number: 4 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDWEIKT*TVGLQQ
Trigger: CTGTTGTAAGCCGACAGTTCAAGTCTTTATTTCCCA...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAAAACACTCTGCTTTCCTaGTCATGTGTTTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: VLESSLFISYHHHSKITENTLLS*SCVLCL
Trigger: CAAGCACAAAACACATGATCAGGAAAGCAGAGTGTT...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATGAGGAACTGAGTAGCTaGATGAATGATCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDEELSS*MNDPLL
Trigger: TAGCAAAGGATCATTCATTCAGCTACTCAGTTCCTC...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCATATTCCAATGTATTATaGACCAGTCAGCTATCTGTC +
Preference number: 4 (lower is better)
Translates to: GRQDPSSGKFSVHQLPSSYSNVL*TSQLSV
Trigger: GACAGATAGCTGACTGGTTCATAATACATTGGAATA...TGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATGGCTCGAACAGGTCATaGAAAAATTTTTCTTACAGT +
Preference number: 4 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYGSNRS*KNFSYS
Trigger: ACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCC...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp GAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACGGCTCGAACAGGTCATaGAAAAATTTTTCTTACAGT +
Preference number: 4 (lower is better)
Translates to: EDRTQVLESSLFISYHHHGSNRS*KNFSYS
Trigger: ACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCC...GTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp TTTGGTCCAAAGAAACAAATGGATTTAGGCAATGTAGCAAGAGACTTTAGCAAAAAGATCTCTTTCAGCTaGCGCACTGTCAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FGPKKQMDLGNVARDFSKKISFS*RTVRPS
Trigger: TGAAGGCCTGACAGTGCGGCAGCTGAAAGAGATCTT...TTTGCTAAAGTCTCTTGCTACATTGCCTAAATCCATTTGTTTCTTTGGACCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGCTCTGTCTTAACATTTaGTCTCCAGGAACTTCAACA +
Preference number: 4 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVLCLNI*SPGTST
Trigger: TGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp GGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTGAAAGCTCTTAAGTaGTCTGTCTTAACATTTGCT +
Preference number: 4 (lower is better)
Translates to: GRQDPSSGKFSVHQLPSSLKALK*SVLTFA
Trigger: AGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAG...TGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACATCACCTACTCATTaGATGGTCCTTCCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHTSPTH*MVLPKE
Trigger: CTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGT...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGAAGGCGTTTAGGGTTTaGATAGTTCATCCATTGGTA +
Preference number: 4 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALKAFRV*IVHPLV
Trigger: TACCAATGGATGAACTATGCAAACCCTAAACGCCTT...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTATACACATTTGGGTTTaGTTTAACCTCCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: GDMASCLTWFWEPCNISTIHIWV*FNLQVS
Trigger: ACTTACTTGGAGGTTAAAGCAAACCCAAATGTGTAT...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACATCCTCGATCCTTTATaGCCTTTTGGCAAGATTCCT +
Preference number: 4 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNILDPL*PFGKIP
Trigger: AGGAATCTTGCCAAAAGGGCATAAAGGATCGAGGAT...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp CACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCATGCTTGACCTGGTTTTaGGAACCCTGCAATATTTCT +
Preference number: 4 (lower is better)
Translates to: HSKITEPRTYPCDLYKFPCLTWF*EPCNIS
Trigger: AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCA...TGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCTTAAGACTTCTAGTTaGGAAAAGGATCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDLKTSS*EKDQKP
Trigger: TGGCTTCTGATCCTTTTCCCAACTAGAAGTCTTAAG...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp CACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTCAGTCACAGCAGATaGACACATAATCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: HSKITEPRTYPCDLYKFPLSHSR*THNLVL
Trigger: GAGAACAAGATTATGTGTCCATCTGCTGTGACTGAG...TGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp CCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCATCCTTTATGCCCTTTTaGCAAGATTCCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PKFWKVLCSSVTIITPRSSFMPF*QDSFLF
Trigger: GAAGAGAAAGGAATCTTGCCAAAAGGGCATAAAGGA...TGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGTCCTTTATGCCCTTTTaGCAAGATTCCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALSFMPF*QDSFLF
Trigger: GAAGAGAAAGGAATCTTGCCAAAAGGGCATAAAGGA...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGAAGAACATACCCATGTaGTTTATACAAGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALKNIPM*FIQVPT
Trigger: AGTGGGAACTTGTATAAATCACATGGGTATGTTCTT...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTTGGGAAATAAAGACTTaGACTGTCGGCTTACAACAG +
Preference number: 4 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFWEIKT*TVGLQQ
Trigger: CTGTTGTAAGCCGACAGTTCAAGTCTTTATTTCCCA...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTGGCCCAGTGTTCAGTTaGCTAGTTTATGCAGTTATT +
Preference number: 4 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFGPVFS*LVYAVI
Trigger: AATAACTGCATAAACTAGTCAACTGAACACTGGGCC...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATGAAACAAGTCTTAACTaGAATCTCAGAGTAATCAGC +
Preference number: 4 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDETSLN*NLRVIS
Trigger: GCTGATTACTCTGAGATTTCAGTTAAGACTTGTTTC...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR TCA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTATCAGTGTAAATATCTaGACTCACTTGGTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFISVNI*THLVLQ
Trigger: TTGAAGCACCAAGTGAGTTCAGATATTTACACTGAT...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp TGGCTCGAACAGGTCATGCAAAAATTTTTCTTACAGTCCAAGCAGGTCTGCTTAGGCTCGAACAGGTCATaGAAAAATTTTTCTTACAGT +
Preference number: 4 (lower is better)
Translates to: WLEQVMQKFFLQSKQVCLGSNRS*KNFSYS
Trigger: ACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCC...TAAGCAGACCTGCTTGGACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR GCA 90 bp TCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTGGTTTTGGGAACCCTaGAATATTTCTACTAGCTTG +
Preference number: 4 (lower is better)
Translates to: SVTIITPRSLNQEHTHVIWFWEP*NISTSL
Trigger: CAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA...AATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGAATGGGAAAACACTCTaGTTTCCTGATCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVNGKTL*FPDHVF
Trigger: AAACACATGATCAGGAAAGCAGAGTGTTTTCCCATT...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTAACAGGACCCAAGTTCTaGAAAGTTCTCTGTTCATCA +
Preference number: 4 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLTGPKF*KVLCSS
Trigger: TGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGT...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CCA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATTCCATCCTCTATaGAGACAAAAAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDLFHPL*RQKAAP
Trigger: AGGAGCAGCTTTTTGTCTCCATAGAGGATGGAATAA...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp TCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTAAGAACATACCCATGTaGTTTATACAAGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: SVTIITPRSLNQEHTHVIKNIPM*FIQVPT
Trigger: AGTGGGAACTTGTATAAATCACATGGGTATGTTCTT...AATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR TCA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGATATTCCAATGTATTATaGACCAGTCAGCTATCTGTC +
Preference number: 4 (lower is better)
Translates to: ESSLFISYHHHSKITEPRYSNVL*TSQLSV
Trigger: GACAGATAGCTGACTGGTTCATAATACATTGGAATA...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp ATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTATTCATTCATGCGCTTaGCACACTTGGTACAGGTTA +
Preference number: 4 (lower is better)
Translates to: IITPRSLNQEHTHVIYTSIHSCA*HTWYRL
Trigger: TAACCTGTACCAAGTGTGGCAAGCGCATGAATGAAT...ACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACTGAAAGCTCTTAAGTaGTCTGTCTTAACATTTGCT +
Preference number: 4 (lower is better)
Translates to: VLESSLFISYHHHSKITELKALK*SVLTFA
Trigger: AGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAG...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGCAGTTGACTAGTTTATaGAGTTATTTCATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVQLTSL*SYFIPP
Trigger: TGGAGGAATGAAATAACTGCATAAACTAGTCAACTG...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCAGTTGACTAGTTTATaGAGTTATTTCATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDQLTSL*SYFIPP
Trigger: TGGAGGAATGAAATAACTGCATAAACTAGTCAACTG...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp ATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTCCAGTTTCAAAACATTaGCACGACAGAAAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: IITPRSLNQEHTHVIYTSPVSKH*HDRKQA
Trigger: AGCTTGCTTTCTGTCGTGGCAATGTTTTGAAACTGG...ACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394597.7
CDS-3UTR CCA 90 bp TTTGGTCCAAAGAAACAAATGGATTTAGGCAATGTAGCAAGAGACTTTAGCAAAGAAGAACACAGTCAATaGGTGAGTCCATGCAGATCT +
Preference number: 4 (lower is better)
Translates to: FGPKKQMDLGNVARDFSKEEHSQ*VSPCRS
Trigger: AGATCTGCATGGACTCACCCATTGACTGTGTTCTTC...TTTGCTAAAGTCTCTTGCTACATTGCCTAAATCCATTTGTTTCTTTGGACCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CCA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGACCCAGGATTAGCTTGTaGTTTATCAGTTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: ESSLFISYHHHSKITEPRPRISL*FISCQF
Trigger: AAATTGACAACTGATAAACCACAAGCTAATCCTGGG...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CCA 90 bp ATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTCTCAGTCACAGCAGATaGACACATAATCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: IITPRSLNQEHTHVIYTSLSHSR*THNLVL
Trigger: GAGAACAAGATTATGTGTCCATCTGCTGTGACTGAG...ACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR GCA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTAGGCTCGAACAGGTCATaGAAAAATTTTTCTTACAGT +
Preference number: 4 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLGSNRS*KNFSYS
Trigger: ACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCC...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR GCA 90 bp ATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTCTCTGTCTTAACATTTaGTCTCCAGGAACTTCAACA +
Preference number: 4 (lower is better)
Translates to: IITPRSLNQEHTHVIYTSLCLNI*SPGTST
Trigger: TGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG...ACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp TCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTCAGTTGACTAGTTTATaGAGTTATTTCATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SVTIITPRSLNQEHTHVIQLTSL*SYFIPP
Trigger: TGGAGGAATGAAATAACTGCATAAACTAGTCAACTG...AATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR GCA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTTCATGTATTTCAATaGAGCCCTCAACATCATCAT +
Preference number: 4 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDFHVFQ*SPQHHH
Trigger: ATGATGATGTTGAGGGCTGCATTGAAATACATGAAA...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR TCA 90 bp TTTGGTCCAAAGAAACAAATGGATTTAGGCAATGTAGCAAGAGACTTTAGCAAAATCAGTGTAAATATCTaGACTCACTTGGTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: FGPKKQMDLGNVARDFSKISVNI*THLVLQ
Trigger: TTGAAGCACCAAGTGAGTTCAGATATTTACACTGAT...TTTGCTAAAGTCTCTTGCTACATTGCCTAAATCCATTTGTTTCTTTGGACCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS CCA 90 bp GTACCCAGGGTTGGAATAGGCCTGCATCCTGGCTCCCTGGGGTGGTaGGACCTCCTCAGGCTGTCCATCCAGGCAGAACCAGTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: VPRVGIGLHPGSLGW*DLLRLSIQAEPVAA
Trigger: TGCTGCAACTGGTTCTGCCTGGATGGACAGCCTGAGGAGGTCCCACCACCCCAGGGAGCCAGGATGCAGGCCTATTCCAACCCTGGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000414419.6
ENST00000415395.6
ENST00000447669.6
ENST00000581265.1
ENST00000582308.1
ENST00000584655.5
CDS CCA 90 bp GCTGTACCCAGGGTTGGAATAGGCCTGCATCCTGGCTCCCTGGGGTaGTGGGACCTCCTCAGGCTGTCCATCCAGGCAGAACCAGTTGCA +
Preference number: 5 (lower is better)
Translates to: AVPRVGIGLHPGSLG*WDLLRLSIQAEPVA
Trigger: TGCAACTGGTTCTGCCTGGATGGACAGCCTGAGGAGGTCCCACCACCCCAGGGAGCCAGGATGCAGGCCTATTCCAACCCTGGGTACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000414419.6
ENST00000415395.6
ENST00000447669.6
ENST00000581265.1
ENST00000582308.1
ENST00000584655.5
CDS GCA 90 bp GACAAGGTGGAGGCACGAGTCCTGTCCTCCTGGGAGATTACAGGCTaGTGGCCAAGGACCAAGAGCACCAGCTCTTCTTTCTCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: DKVEARVLSSWEITG*WPRTKSTSSSFSRH
Trigger: GTGCCGGGAGAAAGAAGAGCTGGTGCTCTTGGTCCTTGGCCAGCAGCCTGTAATCTCCCAGGAGGACAGGACTCGTGCCTCCACCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000414419.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS CCA 90 bp TCAGGAAAGTCTGGGGACAAGGTGGAGGCACGAGTCCTGTCCTCCTaGGAGATTACAGGCTGCTGGCCAAGGACCAAGAGCACCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SGKSGDKVEARVLSS*EITGCWPRTKSTSS
Trigger: AGAGCTGGTGCTCTTGGTCCTTGGCCAGCAGCCTGTAATCTCCCAGGAGGACAGGACTCGTGCCTCCACCTTGTCCCCAGACTTTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS GCA 90 bp AGGTCTGCTTCCTGGCCGTGTTTGCAAAGTGAGCCCCACAGGACTTaGAGCTTGGTTCCAAGCCTGTTGGGGAAGGGAAGGAGCTGTACC +
Preference number: 5 (lower is better)
Translates to: RSASWPCLQSEPHRT*SLVPSLLGKGRSCT
Trigger: GGTACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000414419.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS GCA 90 bp CATTGGCCTTCCTGGCCGTGTTTGCAAAGTGAGCCCCACAGGACTTaGAGCTTGGTTCCAAGCCTGTTGGGGAAGGGAAGGAGCTGTACC +
Preference number: 5 (lower is better)
Translates to: HWPSWPCLQSEPHRT*SLVPSLLGKGRSCT
Trigger: GGTACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGGCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582308.1
CDS CCA 90 bp AAGGTGGAGGCACGAGTCCTGTCCTCCTGGGAGATTACAGGCTGCTaGCCAAGGACCAAGAGCACCAGCTCTTCTTTCTCCCGGCACATT +
Preference number: 5 (lower is better)
Translates to: KVEARVLSSWEITGC*PRTKSTSSSFSRHI
Trigger: AATGTGCCGGGAGAAAGAAGAGCTGGTGCTCTTGGTCCTTGGCCAGCAGCCTGTAATCTCCCAGGAGGACAGGACTCGTGCCTCCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000414419.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp CCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCGCTTCCTGGCCGTGTTaGCAAAGTGAGCCCCACAGG +
Preference number: 5 (lower is better)
Translates to: PCNISTSLLLCKLANPEPASWPC*QSEPHR
Trigger: CCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGC...GGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGTGTAGCTCGAAACCGTaGGCAGAGAAGGCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLCSSKP*AEKAEA
Trigger: CGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTACA...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACTCTTTTCCCTGCTCCTaGGGCGCCTGGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: AIFLLACSSASWPTLSPDSFPCS*GAWSGR
Trigger: CCTCCCTGACCAGGCGCCCAAGGAGCAGGGAAAAGA...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp TCGCTGAAAGGCTGTAGCTCGAAACCGTTGGCAGAGAAGGCAGAGGCGGGGCCCATCAAGGACCTGGGTTaGAATCCCGGCTCTGTCATT +
Preference number: 5 (lower is better)
Translates to: SLKGCSSKPLAEKAEAGPIKDLG*NPGSVI
Trigger: AATGACAGAGCCGGGATTCAAACCCAGGTCCTTGAT...GGGCCCCGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTACAGCCTTTCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS TCA 90 bp CCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTaGAGAAACCGATGCAAGCTCTCAGGACCGGAAGACATGCACAGC +
Preference number: 5 (lower is better)
Translates to: PTLSPDTPGYFPVRH*RNRCKLSGPEDMHS
Trigger: GCTGTGCATGTCTTCCGGTCCTGAGAGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS GCA 90 bp AGCACTACTTCCTGGCCGTGTTTGCAAAGTGAGCCCCACAGGACTTaGAGCTTGGTTCCAAGCCTGTTGGGGAAGGGAAGGAGCTGTACC +
Preference number: 5 (lower is better)
Translates to: STTSWPCLQSEPHRT*SLVPSLLGKGRSCT
Trigger: GGTACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGTAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS CCA 90 bp TGCAAAGTGAGCCCCACAGGACTTGCAGCTTGGTTCCAAGCCTGTTaGGGAAGGGAAGGAGCTGTACCCAGGGTTGGAATAGGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: CKVSPTGLAAWFQAC*GREGAVPRVGIGLH
Trigger: ATGCAGGCCTATTCCAACCCTGGGTACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTCACTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000414419.6
ENST00000415395.6
ENST00000447669.6
ENST00000581265.1
ENST00000582308.1
ENST00000584655.5
CDS-3UTR CAA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTTCCTGGCCGTGTTaGCAAAGTGAGCCCCACAGG +
Preference number: 5 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQASWPC*QSEPHR
Trigger: CCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGC...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGGTAGACGGGTTCCTCTaGATCCTGAGACACATGGCC +
Preference number: 5 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLVDGFL*ILRHMA
Trigger: GGCCATGTGTCTCAGGATCAAGAGGAACCCGTCTAC...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CAA 90 bp GCCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAATTGGTTCCAAGCCTGTaGGGGAAGGGAAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: ANPEPRHPRLFPCKALKKLVPSL*GKGRSC
Trigger: ACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAA...TTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTCACAGGACTTGCAGCTaGGTTCCAAGCCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAHRTCS*VPSLLG
Trigger: CCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTG...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTGGGCCCATTCCCTACTaGGCTCGAACAGGTCATGCA +
Preference number: 5 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAGPIPY*ARTGHA
Trigger: TGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCCC...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTTGTAGCTCGAAACCGTaGGCAGAGAAGGCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: PRHPRLFPCKALKKPMQACSSKP*AEKAEA
Trigger: CGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTACA...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAATGTAGCTCGAAACCGTaGGCAGAGAAGGCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQCSSKP*AEKAEA
Trigger: CGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTACA...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCCACTGGCCTTGGGCTTaGCCAGCCAAGAGGTACACC +
Preference number: 5 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTHWPWA*PAKRYT
Trigger: GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTG...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAATTGGTTCCAAGCCTGTaGGGGAAGGGAAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQLVPSL*GKGRSC
Trigger: ACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAA...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTGGGCCCATTCCCTACTaGGCTCGAACAGGTCATGCA +
Preference number: 5 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVGPIPY*ARTGHA
Trigger: TGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCCC...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTGTAGACGGGTTCCTCTaGATCCTGAGACACATGGCC +
Preference number: 5 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAVDGFL*ILRHMA
Trigger: GGCCATGTGTCTCAGGATCAAGAGGAACCCGTCTAC...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CAA 90 bp GCCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAAGACATGGCATCTTGCTaGACCTGGTTTTGGGAACCC +
Preference number: 5 (lower is better)
Translates to: ANPEPRHPRLFPCKALKKDMASC*TWFWEP
Trigger: GGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTC...TTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTTGGGAGCCTGATGTTTaGTTGGCTCCCAGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: PRHPRLFPCKALKKPMQAWEPDV*LAPRVR
Trigger: CCTGACTCTGGGAGCCAACAAAACATCAGGCTCCCA...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTCCTGGTCAGGGAGGTTaGTACAAGCCTGCGCACACA +
Preference number: 5 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVPGQGG*YKPAHT
Trigger: TGTGTGCGCAGGCTTGTACAAACCTCCCTGACCAGG...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGGATGGACACATAATCTaGTTCTCCCAGGGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLDGHII*FSQGLH
Trigger: ATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATC...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp TTGGGTACAGGAGGAGGGGTGAAACTGTCTAGGTTCAGGGAGGAAGACAGGACCCCCCACTTGCCCTTATaGGTTGCTTACACCCAGAGT +
Preference number: 5 (lower is better)
Translates to: LGTGGGVKLSRFREEDRTPHLPL*VAYTQS
Trigger: ACTCTGGGTGTAAGCAACCAATAAGGGCAAGTGGGG...GGTCCTGTCTTCCTCCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTACCCAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp TTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTCCTCTACACAGGACTTGCAGCTaGGTTCCAAGCCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: FCAWPRFCSKLLSPPAPLHRTCS*VPSLLG
Trigger: CCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTG...TAGAGGAGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp TGCTTTCTCCCTGACCTGCCCCCAAAAATCAGTGGGCTAGGAAAGGGAATGAAAGGGCCCATTCCCTACTaGGCTCGAACAGGTCATGCA +
Preference number: 5 (lower is better)
Translates to: CFLPDLPPKISGLGKGMKGPIPY*ARTGHA
Trigger: TGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCCC...TTTCATTCCCTTTCCTAGCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAAGTAGACGGGTTCCTCTaGATCCTGAGACACATGGCC +
Preference number: 5 (lower is better)
Translates to: KTGMLRGDMASCLTWFWEVDGFL*ILRHMA
Trigger: GGCCATGTGTCTCAGGATCAAGAGGAACCCGTCTAC...TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CAA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCGTAGACGGGTTCCTCTaGATCCTGAGACACATGGCC +
Preference number: 5 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTVDGFL*ILRHMA
Trigger: GGCCATGTGTCTCAGGATCAAGAGGAACCCGTCTAC...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CAA 90 bp TGCTTTCTCCCTGACCTGCCCCCAAAAATCAGTGGGCTAGGAAAGGGAATGAAATACTGCTCCCCCGTTTaGGTCTTCGGCACCACTGAC +
Preference number: 5 (lower is better)
Translates to: CFLPDLPPKISGLGKGMKYCSPV*VFGTTD
Trigger: GTCAGTGGTGCCGAAGACCAAAACGGGGGAGCAGTA...TTTCATTCCCTTTCCTAGCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCCATTCATTCATGCGCTaGCCACACTTGGTACAGGTT +
Preference number: 5 (lower is better)
Translates to: GMLRGDMASCLTWFWEPCHSFMR*PHLVQV
Trigger: AACCTGTACCAAGTGTGGCAAGCGCATGAATGAATG...GCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGAATATTTCTACTAGCTaGCTCCTCTGCAAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLNISTS*LLCKLA
Trigger: GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATT...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTAGCTaGCTCCTCTGCAAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GMLRGDMASCLTWFWEPCNISTS*LLCKLA
Trigger: GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATT...GCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp CATGTGTTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTAAGTTCCCACTGGCCTaGGGCTTTGCCAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: HVFCAWPRFCSKLLSPPAKFPLA*GFASQE
Trigger: CTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTT...AGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAACACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGAGCCTGATGTTTTGTaGGCTCCCAGAGTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQEPDVL*APRVRS
Trigger: TGACCTGACTCTGGGAGCCAACAAAACATCAGGCTC...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS TCA 90 bp TCACTCTCTCCATCAGCTCCCACTTCTCACAGCAGCCCTTGTAGTTaGCAAAGTTGCGAGCCAAGATCTCTTTCAGCTGCCGCACTGTCA +
Preference number: 5 (lower is better)
Translates to: SLSPSAPTSHSSPCS*QSCEPRSLSAAALS
Trigger: TGACAGTGCGGCAGCTGAAAGAGATCTTGGCTCGCAACTTTGTCAACTACAAGGGCTGCTGTGAGAAGTGGGAGCTGATGGAGAGAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000581039.1
ENST00000584541.1
ENST00000584655.5
CDS-3UTR CAA 90 bp ACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCGCTTCCTGGCCGTGTTaGCAAAGTGAGCCCCACAGG +
Preference number: 5 (lower is better)
Translates to: TEPRTYPCDLYKFPLALGASWPC*QSEPHR
Trigger: CCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGC...GCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp TTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACTGTAGCTCGAAACCGTaGGCAGAGAAGGCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: FWEPCNISTSLLLCKLANCSSKP*AEKAEA
Trigger: CGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTACA...GTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGTTGCTTGACCTGGTTTaGGGAACCCTGCAATATTTC +
Preference number: 5 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLLLDLV*GTLQYF
Trigger: GAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAA...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp CCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAAGCTTCATGTGTTTTGTGCTaGGCCACGCTTCTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: PRHPRLFPCKALKKPMQASCVLC*ATLLQQ
Trigger: TTGCTGCAGAAGCGTGGCCAAGCACAAAACACATGA...AGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCACAGGACTTGCAGCTaGGTTCCAAGCCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: REEDRTQVLESSLFISYHHRTCS*VPSLLG
Trigger: CCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTG...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GACTGTGAGGGCTCAAATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGTACTGCTCCCCCGTTTaGGTCTTCGGCACCACTGAC +
Preference number: 5 (lower is better)
Translates to: DCEGSNTSPTHCMVLPKEYCSPV*VFGTTD
Trigger: GTCAGTGGTGCCGAAGACCAAAACGGGGGAGCAGTA...CTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATTTGAGCCCTCACAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAACCGATGCAACATTCATTCATGCGCTaGCCACACTTGGTACAGGTT +
Preference number: 5 (lower is better)
Translates to: EPRHPRLFPCKALKKPMQHSFMR*PHLVQV
Trigger: AACCTGTACCAAGTGTGGCAAGCGCATGAATGAATG...TTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GTGACTACCACACTGGACAGTGCAGGTGTAGACGGAGTTCAGATCAGACTCCTGCATTCATTCATGCGCTaGCCACACTTGGTACAGGTT +
Preference number: 5 (lower is better)
Translates to: VTTTLDSAGVDGVQIRLLHSFMR*PHLVQV
Trigger: AACCTGTACCAAGTGTGGCAAGCGCATGAATGAATG...CAGGAGTCTGATCTGAACTCCGTCTACACCTGCACTGTCCAGTGTGGTAGTCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGCACTGGCCTTGGGCTTaGCCAGCCAAGAGGTACACC +
Preference number: 5 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWHWPWA*PAKRYT
Trigger: GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTG...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp TTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTCCTCTAGAGCCTGATGTTTTGTaGGCTCCCAGAGTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: FCAWPRFCSKLLSPPAPLEPDVL*APRVRS
Trigger: TGACCTGACTCTGGGAGCCAACAAAACATCAGGCTC...TAGAGGAGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp TGCTTTCTCCCTGACCTGCCCCCAAAAATCAGTGGGCTAGGAAAGGGAATGAAAACAACACTGAGCATCTaGACCAAGGTCACTTGGCCC +
Preference number: 5 (lower is better)
Translates to: CFLPDLPPKISGLGKGMKTTLSI*TKVTWP
Trigger: GGGCCAAGTGACCTTGGTCAAGATGCTCAGTGTTGT...TTTCATTCCCTTTCCTAGCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GCCAACCCTGAGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTGAAGAAATCTAGCCCAGGACATTaGGTGTTTTTGAATAGGCAC +
Preference number: 5 (lower is better)
Translates to: ANPEPRHPRLFPCKALKKSSPGH*VFLNRH
Trigger: GTGCCTATTCAAAAACACCAAATGTCCTGGGCTAGA...TTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCTCAGGGTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAGTCTGGCAAGCAACTaGAACTCCTTTGAAACTGTT +
Preference number: 5 (lower is better)
Translates to: GMLRGDMASCLTWFWEPCSLASN*NSFETV
Trigger: AACAGTTTCAAAGGAGTTCAAGTTGCTTGCCAGACT...GCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415395.6
CDS-3UTR CAA 90 bp TCATCTTCTACTCGACATGCTGAATGTCTTCTGGGAGGGGCTTTGGAATCAAGGCTTCTGGGAGGGGCTTaGGAATCAAGGACCTGGGTT +
Preference number: 5 (lower is better)
Translates to: SSSTRHAECLLGGALESRLLGGA*ESRTWV
Trigger: AACCCAGGTCCTTGATTCCAAAGCCCCTCCCAGAAG...CCTTGATTCCAAAGCCCCTCCCAGAAGACATTCAGCATGTCGAGTAGAAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS TCA 90 bp AAACATTGCCACGACAGAAAGCAAGCTGTCTCTAGTTCCTGTGGCTaGGGTCGCTGGAGCCATGTTCAGATGAGATCATCTCAGGAACCA +
Preference number: 5 (lower is better)
Translates to: KHCHDRKQAVSSSCG*GRWSHVQMRSSQEP
Trigger: TGGTTCCTGAGATGATCTCATCTGAACATGGCTCCAGCGACCTCAGCCACAGGAACTAGAGACAGCTTGCTTTCTGTCGTGGCAATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394597.7
CDS-3UTR CAA 90 bp CTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGGTTCCAAGCCTGTaGGGGAAGGGAAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: LNQEHTHVIYTSSHWPWALVPSL*GKGRSC
Trigger: ACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAA...AGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTGTAGCTCGAAACCGTaGGCAGAGAAGGCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: EDRTQVLESSLFISYHHHCSSKP*AEKAEA
Trigger: CGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTACA...GTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCCATTCATTCATGCGCTaGCCACACTTGGTACAGGTT +
Preference number: 5 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTHSFMR*PHLVQV
Trigger: AACCTGTACCAAGTGTGGCAAGCGCATGAATGAATG...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGGCCTTGGGCTTaGCCAGCCAAGAGGTACACC +
Preference number: 5 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDHWPWA*PAKRYT
Trigger: GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTG...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGAAGTTCCCACTGGCCTaGGGCTTTGCCAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWKFPLA*GFASQE
Trigger: CTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTT...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTTGGGAGCCTGATGTTTaGTTGGCTCCCAGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: GDMASCLTWFWEPCNISTWEPDV*LAPRVR
Trigger: CCTGACTCTGGGAGCCAACAAAACATCAGGCTCCCA...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp AGGTACACCCCTGGGAAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGAAGAGCACAGGCTCTTaGCCTAAATCTATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: RYTPGKTGMLRGDMASCLKSTGS*PKSISS
Trigger: TGAAGAAATAGATTTAGGCAAAGAGCCTGTGCTCTT...CAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTTCCCAGGGGTGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp TTGGGTACAGGAGGAGGGGTGAAACTGTCTAGGTTCAGGGAGGAAGACAGGACCCTGGGAAATAAAGACTaGAACTGTCGGCTTACAACA +
Preference number: 5 (lower is better)
Translates to: LGTGGGVKLSRFREEDRTLGNKD*NCRLTT
Trigger: TGTTGTAAGCCGACAGTTCAAGTCTTTATTTCCCAG...GGTCCTGTCTTCCTCCCTGAACCTAGACAGTTTCACCCCTCCTCCTGTACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp CCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCTGGCCCAGTGTTCAGTaGACTAGTTTATGCAGTTAT +
Preference number: 5 (lower is better)
Translates to: PCNISTSLLLCKLANPEPWPSVQ*TSLCSY
Trigger: ATAACTGCATAAACTAGTCAACTGAACACTGGGCCA...GGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTCTTGACCAAGGTCACTaGGCCCAACCACAGGCTAAT +
Preference number: 5 (lower is better)
Translates to: RGDMASCLTWFWEPCNISLDQGH*AQPQAN
Trigger: ATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAG...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATCCTGGTCAGGGAGGTTaGTACAAGCCTGCGCACACA +
Preference number: 5 (lower is better)
Translates to: ALEGQFSPYEQINRLWTYPGQGG*YKPAHT
Trigger: TGTGTGCGCAGGCTTGTACAAACCTCCCTGACCAGG...ATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTGAGAACTGACCCTCAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACTCTTTTCCCTGCTCCTaGGGCGCCTGGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNSFPCS*GAWSGR
Trigger: CCTCCCTGACCAGGCGCCCAAGGAGCAGGGAAAAGA...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp TCATCACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTAATGTGAGCAAAGTGTaGTGGCTCATCCTCGATCCT +
Preference number: 5 (lower is better)
Translates to: SSLGAEQVSSLGQCEQSVNVSKV*WLILDP
Trigger: AGGATCGAGGATGAGCCACAACACTTTGCTCACATT...AACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGTTCAGCACCCAGTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp CTACTTGGCTCGAACAGGTCATGCAAAAATTTTTCTTACAGTCCAAGCAGGTCTCACAGGACTTGCAGCTaGGTTCCAAGCCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LLGSNRSCKNFSYSPSRSHRTCS*VPSLLG
Trigger: CCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTG...AGACCTGCTTGGACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCCAAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR CAA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATGCTTCCTGGCCGTGTTaGCAAAGTGAGCCCCACAGG +
Preference number: 5 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHASWPC*QSEPHR
Trigger: CCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGC...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACGCTTCCTGGCCGTGTTaGCAAAGTGAGCCCCACAGG +
Preference number: 5 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNASWPC*QSEPHR
Trigger: CCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGC...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp TTCCCTACTTGGCTCGAACAGGTCATGCAAAAATTTTTCTTACAGTCCAAGCAGGGGCCCATTCCCTACTaGGCTCGAACAGGTCATGCA +
Preference number: 5 (lower is better)
Translates to: FPTWLEQVMQKFFLQSKQGPIPY*ARTGHA
Trigger: TGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCCC...CTGCTTGGACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCCAAGTAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR CAA 90 bp TGGTTTTGGGAACCCTGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAATATTTCTACTAGCTaGCTCCTCTGCAAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: WFWEPCNISTSLLLCKLANISTS*LLCKLA
Trigger: GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATT...GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCAGGGTTCCCAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp AGGGAGGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATGACATGGCATCTTGCTaGACCTGGTTTTGGGAACCC +
Preference number: 5 (lower is better)
Translates to: REEDRTQVLESSLFISYHDMASC*TWFWEP
Trigger: GGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTC...ATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATCACTGGCCTTGGGCTTaGCCAGCCAAGAGGTACACC +
Preference number: 5 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDHWPWA*PAKRYT
Trigger: GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTG...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATAAGTTCCCACTGGCCTaGGGCTTTGCCAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDKFPLA*GFASQE
Trigger: CTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTT...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GACTGTGAGGGCTCAAATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGGAGCCTGATGTTTTGTaGGCTCCCAGAGTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: DCEGSNTSPTHCMVLPKEEPDVL*APRVRS
Trigger: TGACCTGACTCTGGGAGCCAACAAAACATCAGGCTC...CTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATTTGAGCCCTCACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp ACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCCCACGTTTCGCCATGTaGTCCAGACTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TEPRTYPCDLYKFPLALGPRFAM*SRLVSN
Trigger: GTTTGAGACCAGTCTGGACAACATGGCGAAACGTGG...GCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp CTCTGTCTTAACATTTGCTCTCCAGGAACTTCAACAGCAGTCTGGCCAGAGAAGACTTGCCCTTATTGGTaGCTTACACCCAGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: LCLNICSPGTSTAVWPEKTCPYW*LTPRVH
Trigger: GTGCACTCTGGGTGTAAGCAACCAATAAGGGCAAGT...CTTCTCTGGCCAGACTGCTGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTCAATCCTTCCAGCTCTaGAGGGTCAGTTCTCACCTT +
Preference number: 5 (lower is better)
Translates to: RGDMASCLTWFWEPCNISQSFQL*RVSSHL
Trigger: AAGGTGAGAACTGACCCTCAAGAGCTGGAAGGATTG...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTTTGGTTCCAAGCCTGTaGGGGAAGGGAAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFLVPSL*GKGRSC
Trigger: ACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAA...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGACACAGGACTTGCAGCTaGGTTCCAAGCCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: ESSLFISYHHHSKITEPRHRTCS*VPSLLG
Trigger: CCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTG...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATGGGCCCATTCCCTACTaGGCTCGAACAGGTCATGCA +
Preference number: 5 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHGPIPY*ARTGHA
Trigger: TGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCCC...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp ATTCCCTACTTGGCTCGAACAGGTCATGCAAAAATTTTTCTTACAGTCCAAGCATGTAGCTCGAAACCGTaGGCAGAGAAGGCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: IPYLARTGHAKIFLTVQACSSKP*AEKAEA
Trigger: CGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTACA...TGCTTGGACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCCAAGTAGGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR CAA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAATGTAGCTCGAAACCGTaGGCAGAGAAGGCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: VLESSLFISYHHHSKITECSSKP*AEKAEA
Trigger: CGCCTCTGCCTTCTCTGCCAACGGTTTCGAGCTACA...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp TCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTACTGCTCCCCCGTTTaGGTCTTCGGCACCACTGAC +
Preference number: 5 (lower is better)
Translates to: SVTIITPRSLNQEHTHVIYCSPV*VFGTTD
Trigger: GTCAGTGGTGCCGAAGACCAAAACGGGGGAGCAGTA...AATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CAA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTAATATTTCTACTAGCTaGCTCCTCTGCAAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RGDMASCLTWFWEPCNISNISTS*LLCKLA
Trigger: GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATT...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp TGCTTTCTCCCTGACCTGCCCCCAAAAATCAGTGGGCTAGGAAAGGGAATGAAATTGCTTGACCTGGTTTaGGGAACCCTGCAATATTTC +
Preference number: 5 (lower is better)
Translates to: CFLPDLPPKISGLGKGMKLLDLV*GTLQYF
Trigger: GAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAA...TTTCATTCCCTTTCCTAGCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp GGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCAGACATGGCATCTTGCTaGACCTGGTTTTGGGAACCC +
Preference number: 5 (lower is better)
Translates to: GRQDPSSGKFSVHQLPSSDMASC*TWFWEP
Trigger: GGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTC...TGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTCACTGGCCTTGGGCTTaGCCAGCCAAGAGGTACACC +
Preference number: 5 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFHWPWA*PAKRYT
Trigger: GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTG...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp GTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATAAGTTCCCACTGGCCTaGGGCTTTGCCAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: VLCSSVTIITPRSLNQEHKFPLA*GFASQE
Trigger: CTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTT...ATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp GCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGACTGCATAGTTCATCCATaGGTAATGGGAAAACACTCT +
Preference number: 5 (lower is better)
Translates to: AIFLLACSSASWPTLSPDCIVHP*VMGKHS
Trigger: AGAGTGTTTTCCCATTACCAATGGATGAACTATGCA...GTCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp AGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTCACTGTCAGGCTCTTTaGTCAGTCCTATCAACCTCT +
Preference number: 5 (lower is better)
Translates to: RGDMASCLTWFWEPCNISHCQAL*SVLSTS
Trigger: AGAGGTTGATAGGACTGACAAAAGAGCCTGACAGTG...AGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACATCCCAGGATTAGCTaGTGGTTTATCAGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: KTGMLRGDMASCLTWFWEHPRIS*WFISCQ
Trigger: TTGACAACTGATAAACCACAAGCTAATCCTGGGATG...TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp CATGTGTTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTTCATTCTCTTCTAGGTaGTTCCATGGCCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: HVFCAWPRFCSKLLSPPASFSSR*FHGLFH
Trigger: ATGGAAGAGGCCATGGAACAACCTAGAAGAGAATGA...AGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAACACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCATTTTCTTCCAGTCTTaGCTGCTGAGATCTGACTGT +
Preference number: 5 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTIFFQS*LLRSDC
Trigger: ACAGTCAGATCTCAGCAGCAAAGACTGGAAGAAAAT...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp TGCAATATTTCTACTAGCTTGCTCCTCTGCAAGCTGGCCAACCCTGAGCCCAGAATTTTCTTCCAGTCTTaGCTGCTGAGATCTGACTGT +
Preference number: 5 (lower is better)
Translates to: CNISTSLLLCKLANPEPRIFFQS*LLRSDC
Trigger: ACAGTCAGATCTCAGCAGCAAAGACTGGAAGAAAAT...TCTGGGCTCAGGGTTGGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp TTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTCCTCTAAAAGCTGCTCCTCCTTaGAGTACTGACCTACATAGA +
Preference number: 5 (lower is better)
Translates to: FCAWPRFCSKLLSPPAPLKAAPP*STDLHR
Trigger: TCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTT...TAGAGGAGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp ACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCCAATCCTTCCAGCTCTaGAGGGTCAGTTCTCACCTT +
Preference number: 5 (lower is better)
Translates to: TEPRTYPCDLYKFPLALGQSFQL*RVSSHL
Trigger: AAGGTGAGAACTGACCCTCAAGAGCTGGAAGGATTG...GCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp TATTTTAATCATTGCCATGCTTTTCTAGGCACCCAGGCCTGTAACTGTCATCTTACTTCCTGGCCGTGTTaGCAAAGTGAGCCCCACAGG +
Preference number: 5 (lower is better)
Translates to: YFNHCHAFLGTQACNCHLTSWPC*QSEPHR
Trigger: CCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGT...AAGATGACAGTTACAGGCCTGGGTGCCTAGAAAAGCATGGCAATGATTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS-3UTR CAA 90 bp CACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCATTGGTTCCAAGCCTGTaGGGGAAGGGAAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: HSKITEPRTYPCDLYKFPLVPSL*GKGRSC
Trigger: ACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAA...TGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp ATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTGCTTCCTGGCCGTGTTaGCAAAGTGAGCCCCACAGG +
Preference number: 5 (lower is better)
Translates to: IITPRSLNQEHTHVIYTSASWPC*QSEPHR
Trigger: CCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGC...ACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTAGGGCCCATTCCCTACTaGGCTCGAACAGGTCATGCA +
Preference number: 5 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLGPIPY*ARTGHA
Trigger: TGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCCC...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACGTAGACGGGTTCCTCTaGATCCTGAGACACATGGCC +
Preference number: 5 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNVDGFL*ILRHMA
Trigger: GGCCATGTGTCTCAGGATCAAGAGGAACCCGTCTAC...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CAA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACTGCTCCCCCGTTTaGGTCTTCGGCACCACTGAC +
Preference number: 5 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLYCSPV*VFGTTD
Trigger: GTCAGTGGTGCCGAAGACCAAAACGGGGGAGCAGTA...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
CDS-3UTR CAA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTAAAGTTCCCACTGGCCTaGGGCTTTGCCAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLKFPLA*GFASQE
Trigger: CTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTT...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTGGGAGCCTGATGTTTaGTTGGCTCCCAGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDWEPDV*LAPRVR
Trigger: CCTGACTCTGGGAGCCAACAAAACATCAGGCTCCCA...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp GGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCATCATGTGTTTTGTGCTaGGCCACGCTTCTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: GRQDPSSGKFSVHQLPSSSCVLC*ATLLQQ
Trigger: TTGCTGCAGAAGCGTGGCCAAGCACAAAACACATGA...TGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp TTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTCCTCTATGGCCCAGTGTTCAGTaGACTAGTTTATGCAGTTAT +
Preference number: 5 (lower is better)
Translates to: FCAWPRFCSKLLSPPAPLWPSVQ*TSLCSY
Trigger: ATAACTGCATAAACTAGTCAACTGAACACTGGGCCA...TAGAGGAGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp GTGATTTATACAAGTTCCCACTGGCCTTGGGCTTTGCCAGCCAAGAGGTACACCAACTGGAATGGGATCTaGGAACTCCCAACTTTAATT +
Preference number: 5 (lower is better)
Translates to: VIYTSSHWPWALPAKRYTNWNGI*ELPTLI
Trigger: AATTAAAGTTGGGAGTTCCAAGATCCCATTCCAGTT...GGTGTACCTCTTGGCTGGCAAAGCCCAAGGCCAGTGGGAACTTGTATAAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp AAGACAGGCATGCTCAGGGGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAAAACTGGAATGGGATCTaGGAACTCCCAACTTTAATT +
Preference number: 5 (lower is better)
Translates to: KTGMLRGDMASCLTWFWENWNGI*ELPTLI
Trigger: AATTAAAGTTGGGAGTTCCAAGATCCCATTCCAGTT...TTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACCCCTGAGCATGCCTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp TGCTTTCTCCCTGACCTGCCCCCAAAAATCAGTGGGCTAGGAAAGGGAATGAAACATCCCAGGATTAGCTaGTGGTTTATCAGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: CFLPDLPPKISGLGKGMKHPRIS*WFISCQ
Trigger: TTGACAACTGATAAACCACAAGCTAATCCTGGGATG...TTTCATTCCCTTTCCTAGCCCACTGATTTTTGGGGGCAGGTCAGGGAGAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTACAACACTGAGCATCTaGACCAAGGTCACTTGGCCC +
Preference number: 5 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFTTLSI*TKVTWP
Trigger: GGGCCAAGTGACCTTGGTCAAGATGCTCAGTGTTGT...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp CCTATGACTTTAGAACCCTCAGTTGCAGGTGTGCATGTTCCAGCCAACACTCCATCAACCCAATTGGTCTaGGGATTCATCCTTTACCTA +
Preference number: 5 (lower is better)
Translates to: PMTLEPSVAGVHVPANTPSTQLV*GFILYL
Trigger: TAGGTAAAGGATGAATCCCAAGACCAATTGGGTTGA...TGGAGTGTTGGCTGGAACATGCACACCTGCAACTGAGGGTTCTAAAGTCATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTCCACGTTTCGCCATGTaGTCCAGACTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFPRFAM*SRLVSN
Trigger: GTTTGAGACCAGTCTGGACAACATGGCGAAACGTGG...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGCCCCACTTGCCCTTATaGGTTGCTTACACCCAGAGT +
Preference number: 5 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALPHLPL*VAYTQS
Trigger: ACTCTGGGTGTAAGCAACCAATAAGGGCAAGTGGGG...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTGGACCCAGCCCCACTaGCCCTTATTGGTTGCTTAC +
Preference number: 5 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDWTQPH*PLLVAY
Trigger: GTAAGCAACCAATAAGGGCAAGTGGGGCTGGGTCCA...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAATGGACCCAGCCCCACTaGCCCTTATTGGTTGCTTAC +
Preference number: 5 (lower is better)
Translates to: VLESSLFISYHHHSKITEWTQPH*PLLVAY
Trigger: GTAAGCAACCAATAAGGGCAAGTGGGGCTGGGTCCA...TTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GACTGTGAGGGCTCAAATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGGCCAGTTTCAAAACATaGCCACGACAGAAAGCAAGC +
Preference number: 5 (lower is better)
Translates to: DCEGSNTSPTHCMVLPKEASFKT*PRQKAS
Trigger: GCTTGCTTTCTGTCGTGGCAATGTTTTGAAACTGGC...CTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATTTGAGCCCTCACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394597.7
CDS-3UTR CAA 90 bp TTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACTCCTACAGAGCTTGCTaGAAGCCTGCTAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: FWKVLCSSVTIITPRSLNSYRAC*KPARVS
Trigger: GGAGACCCTAGCAGGCTTCAAGCAAGCTCTGTAGGA...GTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415395.6
CDS TCA 90 bp CATGTCCCCAAGTCTAGGGGGCCTTTGTCAACACGTGTTTCATCTTaGAGGGTGATTTCTAGCCAAGTAGATAAGATTACCTGTTCACCT +
Preference number: 5 (lower is better)
Translates to: HVPKSRGPLSTRVSS*RVISSQVDKITCSP
Trigger: AGGTGAACAGGTAATCTTATCTACTTGGCTAGAAATCACCCTTCAAGATGAAACACGTGTTGACAAAGGCCCCCTAGACTTGGGGACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447669.6
CDS-3UTR CAA 90 bp ATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTCACAGGACTTGCAGCTaGGTTCCAAGCCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: IITPRSLNQEHTHVIYTSHRTCS*VPSLLG
Trigger: CCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTG...ACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp TTTTGTGCTTGGCCACGCTTCTGCAGCAAACTCTTAAGTCCTCCAGCTCCTCTATGCATAGTTCATCCATaGGTAATGGGAAAACACTCT +
Preference number: 5 (lower is better)
Translates to: FCAWPRFCSKLLSPPAPLCIVHP*VMGKHS
Trigger: AGAGTGTTTTCCCATTACCAATGGATGAACTATGCA...TAGAGGAGCTGGAGGACTTAAGAGTTTGCTGCAGAAGCGTGGCCAAGCACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp TCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGGTGCTTCAACCCAATaGGTCTTGGGATTCATCCTT +
Preference number: 5 (lower is better)
Translates to: SLNQEHTHVIYTSSHWPWGASTQ*VLGFIL
Trigger: AAGGATGAATCCCAAGACCAATTGGGTTGAAGCACC...CCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGGATGGACACATAATCTaGTTCTCCCAGGGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVDGHII*FSQGLH
Trigger: ATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATC...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCAAATGTGAGCAAAGTGTaGTGGCTCATCCTCGATCCT +
Preference number: 5 (lower is better)
Translates to: GRQDPSSGKFSVHQLPSSNVSKV*WLILDP
Trigger: AGGATCGAGGATGAGCCACAACACTTTGCTCACATT...TGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATACTTGCCCTTATTGGTaGCTTACACCCAGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: DPSSGKFSVHQLPSSLQDTCPYW*LTPRVH
Trigger: GTGCACTCTGGGTGTAAGCAACCAATAAGGGCAAGT...ATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTTCTAGCCCAGGACATTaGGTGTTTTTGAATAGGCAC +
Preference number: 5 (lower is better)
Translates to: GDMASCLTWFWEPCNISTSSPGH*VFLNRH
Trigger: GTGCCTATTCAAAAACACCAAATGTCCTGGGCTAGA...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GGCCCATTCCCTACTTGGCTCGAACAGGTCATGCAAAAATTTTTCTTACAGTCCAATAACTATGTGATCTaGAGCACTACTTCCTGGCCG +
Preference number: 5 (lower is better)
Translates to: GPFPTWLEQVMQKFFLQSNNYVI*STTSWP
Trigger: CGGCCAGGAAGTAGTGCTCAAGATCACATAGTTATT...GGACTGTAAGAAAAATTTTTGCATGACCTGTTCGAGCCAAGTAGGGAATGGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS TCA 90 bp AAGCAGCTGATGAGTAGACAAATACCCAAAGGACTGTGCATTCTCTaGAGATTATTGTGCTCACAGTTCTCACTTCCCCCAAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: KQLMSRQIPKGLCIL*RLLCSQFSLPPKFC
Trigger: GCAGAACTTTGGGGGAAGTGAGAACTGTGAGCACAATAATCTTCAGAGAATGCACAGTCCTTTGGGTATTTGTCTACTCATCAGCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447669.6
CDS-3UTR CAA 90 bp TTTGGTCCAAAGAAACAAATGGATTTAGGCAATGTAGCAAGAGACTTTAGCAAACACAGGACTTGCAGCTaGGTTCCAAGCCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: FGPKKQMDLGNVARDFSKHRTCS*VPSLLG
Trigger: CCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTG...TTTGCTAAAGTCTCTTGCTACATTGCCTAAATCCATTTGTTTCTTTGGACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp CTCTGTCTTAACATTTGCTCTCCAGGAACTTCAACAGCAGTCTGGCCAGAGAAGAAGAGCACAGGCTCTTaGCCTAAATCTATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LCLNICSPGTSTAVWPEKKSTGS*PKSISS
Trigger: TGAAGAAATAGATTTAGGCAAAGAGCCTGTGCTCTT...CTTCTCTGGCCAGACTGCTGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp CTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGGGCTCTGGGAAATAAAGACTaGAACTGTCGGCTTACAACA +
Preference number: 5 (lower is better)
Translates to: LNQEHTHVIYTSSHWPWALGNKD*NCRLTT
Trigger: TGTTGTAAGCCGACAGTTCAAGTCTTTATTTCCCAG...AGCCCAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp CTCTGTCTTAACATTTGCTCTCCAGGAACTTCAACAGCAGTCTGGCCAGAGAAGTGCATAGTTCATCCATaGGTAATGGGAAAACACTCT +
Preference number: 5 (lower is better)
Translates to: LCLNICSPGTSTAVWPEKCIVHP*VMGKHS
Trigger: AGAGTGTTTTCCCATTACCAATGGATGAACTATGCA...CTTCTCTGGCCAGACTGCTGTTGAAGTTCCTGGAGAGCAAATGTTAAGACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTCTTGACCAAGGTCACTaGGCCCAACCACAGGCTAAT +
Preference number: 5 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFLDQGH*AQPQAN
Trigger: ATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAG...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GGTGACATGGCATCTTGCTTGACCTGGTTTTGGGAACCCTGCAATATTTCTACTTCAACCCAATTGGTCTaGGGATTCATCCTTTACCTA +
Preference number: 5 (lower is better)
Translates to: GDMASCLTWFWEPCNISTSTQLV*GFILYL
Trigger: TAGGTAAAGGATGAATCCCAAGACCAATTGGGTTGA...AGTAGAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAAGATGCCATGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp CAGTACCTCCTGAAAGCTCTTAAGTGCTCTGTCTTAACATTTGCTCTCCAGGAAGGACATTTGGTGTTTTaGAATAGGCACCATTCAGCC +
Preference number: 5 (lower is better)
Translates to: QYLLKALKCSVLTFALQEGHLVF*NRHHSA
Trigger: GGCTGAATGGTGCCTATTCAAAAACACCAAATGTCC...TTCCTGGAGAGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAGGAGGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp CCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACATAGTTATCTAGAGTaGGGAACGTCACTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: PKFWKVLCSSVTIITPRSHSYLE*GTSLLV
Trigger: CACCAGGAGTGACGTTCCCAACTCTAGATAACTATG...TGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGACATTCATTCATGCGCTaGCCACACTTGGTACAGGTT +
Preference number: 5 (lower is better)
Translates to: ESSLFISYHHHSKITEPRHSFMR*PHLVQV
Trigger: AACCTGTACCAAGTGTGGCAAGCGCATGAATGAATG...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp CCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTTTGCTTGACCTGGTTTaGGGAACCCTGCAATATTTC +
Preference number: 5 (lower is better)
Translates to: PLWRQKAAPPLSTDLHRFLLDLV*GTLQYF
Trigger: GAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAA...AAATCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTTTTGTCTCCATAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGTTGCTTGACCTGGTTTaGGGAACCCTGCAATATTTC +
Preference number: 5 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVLLDLV*GTLQYF
Trigger: GAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAA...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp CCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCATTGCTTGACCTGGTTTaGGGAACCCTGCAATATTTC +
Preference number: 5 (lower is better)
Translates to: PKFWKVLCSSVTIITPRSLLDLV*GTLQYF
Trigger: GAAATATTGCAGGGTTCCCAAAACCAGGTCAAGCAA...TGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATCACTGTCAGGCTCTTTaGTCAGTCCTATCAACCTCT +
Preference number: 5 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDHCQAL*SVLSTS
Trigger: AGAGGTTGATAGGACTGACAAAAGAGCCTGACAGTG...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGTCATTCTCTTCTAGGTaGTTCCATGGCCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVSFSSR*FHGLFH
Trigger: ATGGAAGAGGCCATGGAACAACCTAGAAGAGAATGA...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp ATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATGGTGCTTCAACCCAATaGGTCTTGGGATTCATCCTT +
Preference number: 5 (lower is better)
Translates to: ISYHHHSKITEPRTYPCDGASTQ*VLGFIL
Trigger: AAGGATGAATCCCAAGACCAATTGGGTTGAAGCACC...ATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp TCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTCATAGTTATCTAGAGTaGGGAACGTCACTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: SVTIITPRSLNQEHTHVIHSYLE*GTSLLV
Trigger: CACCAGGAGTGACGTTCCCAACTCTAGATAACTATG...AATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAAAGTCTAGGGGGCCTTaGTCAACACGTGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: ESSLFISYHHHSKITEPRKSRGP*STRVSS
Trigger: AGATGAAACACGTGTTGACAAAGGCCCCCTAGACTT...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447669.6
CDS-3UTR CAA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTAAATATTTCTACTAGCTaGCTCCTCTGCAAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLNISTS*LLCKLA
Trigger: GGCCAGCTTGCAGAGGAGCAAGCTAGTAGAAATATT...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS-3UTR CAA 90 bp CACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCATGCACGCACTATCCCTaGCAGACAGAAACAAATTTC +
Preference number: 5 (lower is better)
Translates to: HSKITEPRTYPCDLYKFPCTHYP*QTETNF
Trigger: GAAATTTGTTTCTGTCTGCAAGGGATAGTGCGTGCA...TGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp CAGTACCTCCTGAAAGCTCTTAAGTGCTCTGTCTTAACATTTGCTCTCCAGGAAAAGAGCACAGGCTCTTaGCCTAAATCTATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: QYLLKALKCSVLTFALQEKSTGS*PKSISS
Trigger: TGAAGAAATAGATTTAGGCAAAGAGCCTGTGCTCTT...TTCCTGGAGAGCAAATGTTAAGACAGAGCACTTAAGAGCTTTCAGGAGGTACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp ATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTTCCCACTGGCCTTGTGGCCCAGTGTTCAGTaGACTAGTTTATGCAGTTAT +
Preference number: 5 (lower is better)
Translates to: ITEPRTYPCDLYKFPLALWPSVQ*TSLCSY
Trigger: ATAACTGCATAAACTAGTCAACTGAACACTGGGCCA...CAAGGCCAGTGGGAACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS TCA 90 bp TGGTTTCTGCAGGCTATAGAAATAAAAGGATACGACTGCACAGCTTaGATGTCCCATCAAGGTAATCAAAGTAATGGAAGAGGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: WFLQAIEIKGYDCTA*MSHQGNQSNGRGRE
Trigger: TTCTCTCCCTCTTCCATTACTTTGATTACCTTGATGGGACATTCAAGCTGTGCAGTCGTATCCTTTTATTTCTATAGCCTGCAGAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447669.6
CDS-3UTR CAA 90 bp AGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATGCACGCACTATCCCTaGCAGACAGAAACAAATTTC +
Preference number: 5 (lower is better)
Translates to: SYHHHSKITEPRTYPCDLCTHYP*QTETNF
Trigger: GAAATTTGTTTCTGTCTGCAAGGGATAGTGCGTGCA...TAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp GAAAGTTCTCTGTTCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGACTGGGAAATAAAGACTaGAACTGTCGGCTTACAACA +
Preference number: 5 (lower is better)
Translates to: ESSLFISYHHHSKITEPRLGNKD*NCRLTT
Trigger: TGTTGTAAGCCGACAGTTCAAGTCTTTATTTCCCAG...TCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGAACAGAGAACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp TCATCAGTTACCATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGAACTGGAATGGGATCTaGGAACTCCCAACTTTAATT +
Preference number: 5 (lower is better)
Translates to: SSVTIITPRSLNQEHTHVNWNGI*ELPTLI
Trigger: AATTAAAGTTGGGAGTTCCAAGATCCCATTCCAGTT...CACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGATGGTAACTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000584655.5
CDS-3UTR CAA 90 bp AATACATCACCTACTCATTGCATGGTCCTTCCTAAAGAGCCTAGAAAATGGTTTAAAGCTGCTCCTCCTTaGAGTACTGACCTACATAGA +
Preference number: 5 (lower is better)
Translates to: NTSPTHCMVLPKEPRKWFKAAPP*STDLHR
Trigger: TCTATGTAGGTCAGTACTCAAAGGAGGAGCAGCTTT...AAACCATTTTCTAGGCTCTTTAGGAAGGACCATGCAATGAGTAGGTGATGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS-3UTR CAA 90 bp GGAAGACAGGACCCAAGTTCTGGAAAGTTCTCTGTTCATCAGTTACCATCATCACACATGATAAAATCTTaGTTCATGTCCCCAAGTCTA +
Preference number: 5 (lower is better)
Translates to: GRQDPSSGKFSVHQLPSSHMIKS*FMSPSL
Trigger: TAGACTTGGGGACATGAACAAAGATTTTATCATGTG...TGATGATGGTAACTGATGAACAGAGAACTTTCCAGAACTTGGGTCCTGTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447669.6
CDS-3UTR CAA 90 bp ATCATCACTCCAAGATCACTGAACCAAGAACATACCCATGTGATTTATACAAGTGGACATTTGGTGTTTTaGAATAGGCACCATTCAGCC +
Preference number: 5 (lower is better)
Translates to: IITPRSLNQEHTHVIYTSGHLVF*NRHHSA
Trigger: GGCTGAATGGTGCCTATTCAAAAACACCAAATGTCC...ACTTGTATAAATCACATGGGTATGTTCTTGGTTCAGTGATCTTGGAGTGATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315249.11
ENST00000394597.7
CDS GCA 72 bp CCGGATCCCGGCCGCGGACGCCTCAGGCAGGGAGGCTaGGGACTCCGCCGCGGCGGCGTCTCTGGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: PDPGRGRLRQGG*GLRRGGVSGAE
Trigger: CTCAGCCCCAGAGACGCCGCCGCGGCGGAGTCCGCAGCCTCCCTGCCTGAGGCGTCCGCGGCCGGGATCCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315249.11
ENST00000447669.6
ENST00000584541.1
ENST00000584655.5
CDS CAA 90 bp CTCAGCAGGTACTCTGGCCACGCTCTCCAGGTAGACGGGTTCCTCTaGATCCTGAGACACATGGCCATTGGCCTGCTGCGGCCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: LSRYSGHALQVDGFL*ILRHMAIGLLRPPS
Trigger: GGAGGGCGGCCGCAGCAGGCCAATGGCCATGTGTCTCAGGATCAAGAGGAACCCGTCTACCTGGAGAGCGTGGCCAGAGTACCTGCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584541.1
CDS GCA 72 bp GAACCAGTTGCAGCAGGTTGCCCACATGATAAAATCTaGTGCGGCCGCCCTCCCGGCCGGCACCTAGGAGAG +
Preference number: 6 (lower is better)
Translates to: EPVAAGCPHDKI*CGRPPGRHLGE
Trigger: CTCTCCTAGGTGCCGGCCGGGAGGGCGGCCGCAGCAGATTTTATCATGTGGGCAACCTGCTGCAACTGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315249.11
ENST00000581265.1
ENST00000584655.5
CDS CCA 72 bp AGGGTTGGAATAGGCCTGCATCCTGGCTCCCTGGGGTaGTGGGACCTCCTCAGGCTGTCCATCCAGGCAGAA +
Preference number: 6 (lower is better)
Translates to: RVGIGLHPGSLG*WDLLRLSIQAE
Trigger: TTCTGCCTGGATGGACAGCCTGAGGAGGTCCCACCACCCCAGGGAGCCAGGATGCAGGCCTATTCCAACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000414419.6
ENST00000415395.6
ENST00000447669.6
ENST00000581265.1
ENST00000582308.1
ENST00000584655.5
CDS CCA 72 bp AGGCTGGGTCAGGAAGGCCTGCTGCTCAGGAAAGTCTaGGGACAAGGTGGAGGCACGAGTCCTGTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: RLGQEGLLLRKV*GQGGGTSPVLL
Trigger: CAGGAGGACAGGACTCGTGCCTCCACCTTGTCCCCAGACTTTCCTGAGCAGCAGGCCTTCCTGACCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS GCA 72 bp TTATTGTGCTCACAGTTCTCACTTCCCCCAAAGTTCTaGTGCGGCCGCCCTCCCGGCCGGCACCTAGGAGAG +
Preference number: 6 (lower is better)
Translates to: LLCSQFSLPPKF*CGRPPGRHLGE
Trigger: CTCTCCTAGGTGCCGGCCGGGAGGGCGGCCGCAGCAGAACTTTGGGGGAAGTGAGAACTGTGAGCACAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447669.6
CDS CCA 72 bp TCTGGGGACAAGGTGGAGGCACGAGTCCTGTCCTCCTaGGAGATTACAGGCTGCTGGCCAAGGACCAAGAGC +
Preference number: 6 (lower is better)
Translates to: SGDKVEARVLSS*EITGCWPRTKS
Trigger: GCTCTTGGTCCTTGGCCAGCAGCCTGTAATCTCCCAGGAGGACAGGACTCGTGCCTCCACCTTGTCCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS CAA 72 bp TACTCTGGCCACGCTCTCCAGGTAGACGGGTTCCTCTaGATCCTGAGACACATGGCCATTGGCCTGCTGCGG +
Preference number: 6 (lower is better)
Translates to: YSGHALQVDGFL*ILRHMAIGLLR
Trigger: CCGCAGCAGGCCAATGGCCATGTGTCTCAGGATCAAGAGGAACCCGTCTACCTGGAGAGCGTGGCCAGAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584541.1
CDS CAA 90 bp GCTTCCTGGCCGTGTTTGCAAAGTGAGCCCCACAGGACTTGCAGCTaGGTTCCAAGCCTGTTGGGGAAGGGAAGGAGCTGTACCCAGGGT +
Preference number: 6 (lower is better)
Translates to: ASWPCLQSEPHRTCS*VPSLLGKGRSCTQG
Trigger: ACCCTGGGTACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000414419.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS CAA 90 bp CCTTCCTGGCCGTGTTTGCAAAGTGAGCCCCACAGGACTTGCAGCTaGGTTCCAAGCCTGTTGGGGAAGGGAAGGAGCTGTACCCAGGGT +
Preference number: 6 (lower is better)
Translates to: PSWPCLQSEPHRTCS*VPSLLGKGRSCTQG
Trigger: ACCCTGGGTACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582308.1
CDS CAA 90 bp CTCAGCAGGTACTCTGGCCACGCTCTCCAGGTAGACGGGTTCCTCTaGATCCTGAGACACATGGCCATTGGCCTTCCTGGCCGTGTTTGC +
Preference number: 6 (lower is better)
Translates to: LSRYSGHALQVDGFL*ILRHMAIGLPGRVC
Trigger: GCAAACACGGCCAGGAAGGCCAATGGCCATGTGTCTCAGGATCAAGAGGAACCCGTCTACCTGGAGAGCGTGGCCAGAGTACCTGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582308.1
CDS CAA 90 bp ACTTCCTGGCCGTGTTTGCAAAGTGAGCCCCACAGGACTTGCAGCTaGGTTCCAAGCCTGTTGGGGAAGGGAAGGAGCTGTACCCAGGGT +
Preference number: 6 (lower is better)
Translates to: TSWPCLQSEPHRTCS*VPSLLGKGRSCTQG
Trigger: ACCCTGGGTACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS CAA 72 bp TACTCTGGCCACGCTCTCCAGGTAGACGGGTTCCTCTaGATCCTGAGACACATGGCCATTGGCCTTCCTGGC +
Preference number: 6 (lower is better)
Translates to: YSGHALQVDGFL*ILRHMAIGLPG
Trigger: GCCAGGAAGGCCAATGGCCATGTGTCTCAGGATCAAGAGGAACCCGTCTACCTGGAGAGCGTGGCCAGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582308.1
CDS CAA 90 bp TTGCAAAGTGAGCCCCACAGGACTTGCAGCTTGGTTCCAAGCCTGTaGGGGAAGGGAAGGAGCTGTACCCAGGGTTGGAATAGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: LQSEPHRTCSLVPSL*GKGRSCTQGWNRPA
Trigger: TGCAGGCCTATTCCAACCCTGGGTACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTCACTTTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000414419.6
ENST00000415395.6
ENST00000447669.6
ENST00000581265.1
ENST00000582308.1
ENST00000584655.5
CDS CAA 90 bp CTCAGCAGGTACTCTGGCCACGCTCTCCAGGTAGACGGGTTCCTCTaGATCCTGAGACACATGGCCATTGGCCTGCTGATTCTCCTGAAC +
Preference number: 6 (lower is better)
Translates to: LSRYSGHALQVDGFL*ILRHMAIGLLILLN
Trigger: GTTCAGGAGAATCAGCAGGCCAATGGCCATGTGTCTCAGGATCAAGAGGAACCCGTCTACCTGGAGAGCGTGGCCAGAGTACCTGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
CDS TCA 72 bp CAGAGAGGCCCTTCGGCCTGGGACAAAGCTGTCCTCTaGGTCAATAGACTGGGTCTCATCCTCAGCAGGTAC +
Preference number: 6 (lower is better)
Translates to: QRGPSAWDKAVL*VNRLGLILSRY
Trigger: GTACCTGCTGAGGATGAGACCCAGTCTATTGACTCAGAGGACAGCTTTGTCCCAGGCCGAAGGGCCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000582308.1
ENST00000584541.1
CDS TCA 72 bp CAGAGAGGCCCTTCGGCCTGGGACAAAGCTGTCCTCTaGGTCAATAGACTGCTGATTCTCCTGAACCTGGGC +
Preference number: 6 (lower is better)
Translates to: QRGPSAWDKAVL*VNRLLILLNLG
Trigger: GCCCAGGTTCAGGAGAATCAGCAGTCTATTGACTCAGAGGACAGCTTTGTCCCAGGCCGAAGGGCCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581039.1
ENST00000584655.5
CDS CCA 72 bp AGCCCCACAGGACTTGCAGCTTGGTTCCAAGCCTGTTaGGGAAGGGAAGGAGCTGTACCCAGGGTTGGAATA +
Preference number: 6 (lower is better)
Translates to: SPTGLAAWFQAC*GREGAVPRVGI
Trigger: TATTCCAACCCTGGGTACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000414419.6
ENST00000415395.6
ENST00000447669.6
ENST00000581265.1
ENST00000582308.1
ENST00000584655.5
CDS CAA 72 bp CCGTGTTTGCAAAGTGAGCCCCACAGGACTTGCAGCTaGGTTCCAAGCCTGTTGGGGAAGGGAAGGAGCTGT +
Preference number: 6 (lower is better)
Translates to: PCLQSEPHRTCS*VPSLLGKGRSC
Trigger: ACAGCTCCTTCCCTTCCCCAACAGGCTTGGAACCAAGCTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000414419.6
ENST00000415395.6
ENST00000447669.6
ENST00000581265.1
ENST00000582308.1
ENST00000584655.5
CDS TCA 72 bp TCTTCGGCACCACTGACCAGGTGCTGGAGTCCTTTCTaGTCCTTGTATAGCCGGGTCACTCTCTCCATCAGC +
Preference number: 6 (lower is better)
Translates to: SSAPLTRCWSPF*SLYSRVTLSIS
Trigger: GCTGATGGAGAGAGTGACCCGGCTATACAAGGATCAGAAAGGACTCCAGCACCTGGTCAGTGGTGCCGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000581039.1
ENST00000584541.1
CDS TCA 72 bp AGCCCAGACACCCCAGGCTATTTCCCTGTAAGGCACTaGAGAAACCGATGCAAGCTCTCAGGACCGGAAGAC +
Preference number: 6 (lower is better)
Translates to: SPDTPGYFPVRH*RNRCKLSGPED
Trigger: GTCTTCCGGTCCTGAGAGCTTGCATCGGTTTCTTCAGTGCCTTACAGGGAAATAGCCTGGGGTGTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS CAA 72 bp TACTCTGGCCACGCTCTCCAGGTAGACGGGTTCCTCTaGATCCTGAGACACATGGCCATTGGCCTGCTGATT +
Preference number: 6 (lower is better)
Translates to: YSGHALQVDGFL*ILRHMAIGLLI
Trigger: AATCAGCAGGCCAATGGCCATGTGTCTCAGGATCAAGAGGAACCCGTCTACCTGGAGAGCGTGGCCAGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
CDS TCA 72 bp GTTCCTGTGGCTGAGGTCGCTGGAGCCATGTTCAGATaGGATCATCTCAGGAACCAAGAGCAGCGGCTTTCA +
Preference number: 6 (lower is better)
Translates to: VPVAEVAGAMFR*DHLRNQEQRLS
Trigger: TGAAAGCCGCTGCTCTTGGTTCCTGAGATGATCTCATCTGAACATGGCTCCAGCGACCTCAGCCACAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394597.7
CDS CAA 72 bp TCTTACAGTCCAAGCAGGTCTGCTTCCTGGCCGTGTTaGCAAAGTGAGCCCCACAGGACTTGCAGCTTGGTT +
Preference number: 6 (lower is better)
Translates to: SYSPSRSASWPC*QSEPHRTCSLV
Trigger: AACCAAGCTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGCAGACCTGCTTGGACTGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000414419.6
ENST00000415395.6
ENST00000447669.6
ENST00000584655.5
CDS TCA 72 bp CCATCAGCTCCCACTTCTCACAGCAGCCCTTGTAGTTaGCAAAGTTGCGAGCCAAGATCTCTTTCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: PSAPTSHSSPCS*QSCEPRSLSAA
Trigger: GGCAGCTGAAAGAGATCTTGGCTCGCAACTTTGTCAACTACAAGGGCTGCTGTGAGAAGTGGGAGCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000581039.1
ENST00000584541.1
ENST00000584655.5
CDS TCA 72 bp ATGGTACTGCTCCCCCGTTTTGGTCTTCGGCACCACTaGCCAGGTGCTGGAGTCCTTTCTGATCCTTGTATA +
Preference number: 6 (lower is better)
Translates to: MVLLPRFGLRHH*PGAGVLSDPCI
Trigger: TATACAAGGATCAGAAAGGACTCCAGCACCTGGTCAGTGGTGCCGAAGACCAAAACGGGGGAGCAGTACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000415395.6
ENST00000447669.6
ENST00000581039.1
ENST00000584541.1
CDS GCA 72 bp CACACTCCAGAAGAACACAGTCAATGGGTGAGTCCATaGAGATCTTACACAGGTTCTCCTCCAAGCCTGATG +
Preference number: 6 (lower is better)
Translates to: HTPEEHSQWVSP*RSYTGSPPSLM
Trigger: CATCAGGCTTGGAGGAGAACCTGTGTAAGATCTGCATGGACTCACCCATTGACTGTGTTCTTCTGGAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315249.11
ENST00000394597.7
ENST00000413582.6
ENST00000415395.6
ENST00000447669.6
ENST00000581039.1
ENST00000584541.1
ENST00000584655.5
CDS CAA 72 bp AACTATGTGATCTTGAGCACTACTTCCTGGCCGTGTTaGCAAAGTGAGCCCCACAGGACTTGCAGCTTGGTT +
Preference number: 6 (lower is better)
Translates to: NYVILSTTSWPC*QSEPHRTCSLV
Trigger: AACCAAGCTGCAAGTCCTGTGGGGCTCACTTTGCAAACACGGCCAGGAAGTAGTGCTCAAGATCACATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581265.1
CDS CCA 72 bp CTGGCAAGCAACTTGAACTCCTTTGAAACTGTTTACTaGAATTTTCCAGCAAACCTGCCTGAGGTACCCACC +
Preference number: 6 (lower is better)
Translates to: LASNLNSFETVY*NFPANLPEVPT
Trigger: GGTGGGTACCTCAGGCAGGTTTGCTGGAAAATTCCAGTAAACAGTTTCAAAGGAGTTCAAGTTGCTTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415395.6
CDS TCA 72 bp ATGAGTAGACAAATACCCAAAGGACTGTGCATTCTCTaGAGATTATTGTGCTCACAGTTCTCACTTCCCCCA +
Preference number: 6 (lower is better)
Translates to: MSRQIPKGLCIL*RLLCSQFSLPP
Trigger: TGGGGGAAGTGAGAACTGTGAGCACAATAATCTTCAGAGAATGCACAGTCCTTTGGGTATTTGTCTACTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447669.6
CDS TCA 72 bp AAGTCTAGGGGGCCTTTGTCAACACGTGTTTCATCTTaGAGGGTGATTTCTAGCCAAGTAGATAAGATTACC +
Preference number: 6 (lower is better)
Translates to: KSRGPLSTRVSS*RVISSQVDKIT
Trigger: GGTAATCTTATCTACTTGGCTAGAAATCACCCTTCAAGATGAAACACGTGTTGACAAAGGCCCCCTAGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447669.6
CDS TCA 72 bp CAGGCTATAGAAATAAAAGGATACGACTGCACAGCTTaGATGTCCCATCAAGGTAATCAAAGTAATGGAAGA +
Preference number: 6 (lower is better)
Translates to: QAIEIKGYDCTA*MSHQGNQSNGR
Trigger: TCTTCCATTACTTTGATTACCTTGATGGGACATTCAAGCTGTGCAGTCGTATCCTTTTATTTCTATAGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447669.6