Pregenerated sensors for RFC4 (Homo sapiens)
Ensembl gene IDs: ENSG00000163918Ensembl transcript IDs: ENST00000296273.7, ENST00000392481.6, ENST00000411792.1, ENST00000417876.1, ENST00000418288.5, ENST00000427785.5, ENST00000433496.5, ENST00000448497.1, ENST00000449502.5, ENST00000460408.5, ENST00000479307.5, ENST00000489028.1, ENST00000494047.5
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ATCACAATCTTAAAAGGCGGACACGGCTTCCCATCTGAGCGACTTCCTGACACACGCTACTTCCCGCACTaGCAGCTACTCCTCGATCCT | + |
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Preference number: 4 (lower is better) Translates to: ITILKGGHGFPSERLPDTRYFPH*QLLLDP Trigger: AGGATCGAGGAGTAGCTGCCAGTGCGGGAAGTAGCG...TGTGTCAGGAAGTCGCTCAGATGGGAAGCCGTGTCCGCCTTTTAAGATTGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR CCA 90 bp | AGAATCACAATCTTAAAAGGCGGACACGGCTTCCCATCTGAGCGACTTCCTGACTTCACCCAGTTAGCCTaGCTTCTCGTGCAGGTCACC | + |
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Preference number: 4 (lower is better) Translates to: RITILKGGHGFPSERLPDFTQLA*LLVQVT Trigger: GGTGACCTGCACGAGAAGCCAGGCTAACTGGGTGAA...GTCAGGAAGTCGCTCAGATGGGAAGCCGTGTCCGCCTTTTAAGATTGTGATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR TCA 90 bp | GACATAGTTACAGATAAGACAGAATCGGGTGGTTTTCGACTCCTTCTCCATGGTAGCTGCCTGAGCAGCTaGGGTCATAGAATCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: DIVTDKTESGGFRLLLHGSCLSS*GHRICF Trigger: GAAGCAGATTCTATGACCTCAGCTGCTCAGGCAGCT...ACCATGGAGAAGGAGTCGAAAACCACCCGATTCTGTCTTATCTGTAACTATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR GCA 90 bp | AGACAGAATCGGGTGGTTTTCGACTCCTTCTCCATGGTACGTCTTAAAGCTGCCCCTTTAAGAAATGCTTaGATGGTACTTCACCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: RQNRVVFDSFSMVRLKAAPLRNA*MVLHPV Trigger: AACTGGGTGAAGTACCATGCAAGCATTTCTTAAAGG...GGCAGCTTTAAGACGTACCATGGAGAAGGAGTCGAAAACCACCCGATTCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR GCA 90 bp | TGCATCACAGTTGCACAAAGGCTGATGAGTTGCAAATGTTCATCAGCACCATCTATTGACGAGCTGAGTTaGTGCATGACCCTCATCTAT | + |
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Preference number: 4 (lower is better) Translates to: CITVAQRLMSCKCSSAPSIDELS*CMTLIY Trigger: ATAGATGAGGGTCATGCAGCAACTCAGCTCGTCAAT...AGATGGTGCTGATGAACATTTGCAACTCATCAGCCTTTGTGCAACTGTGATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417876.1 |
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| CDS-3UTR CCA 90 bp | TTATCTGACAGAGGCTTGAAGCGGAATTTTGAACATCTAGAGGTCAGGGGTTCAGCAACCACTTCTTCCTaGAAAGCAACTTCATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSDRGLKRNFEHLEVRGSATTSS*KATSST Trigger: TGTGGATGAAGTTGCTTTCCAGGAAGAAGTGGTTGC...TGAACCCCTGACCTCTAGATGTTCAAAATTCCGCTTCAAGCCTCTGTCAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR TCA 90 bp | GAACTACTTGTATTCCACGTTCATCAGATGCATTTAACTCAAGAACTCTTAATCGAGACTTACGATCACTaGTGTCCCCACAGTCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: ELLVFHVHQMHLTQELLIETYDH*CPHSRL Trigger: GAGGCGACTGTGGGGACATCAGTGATCGTAAGTCTC...GATTAAGAGTTCTTGAGTTAAATGCATCTGATGAACGTGGAATACAAGTAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR GCA 90 bp | CATAGAATCTGCTTCATCCAGAATCACAATCTTAAAAGGCGGACACGGCTTCCCTGTACCTTTAAGAAATaGTTGCATGGTACTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: HRICFIQNHNLKRRTRLPCTFKK*LHGTSP Trigger: GGGTGAAGTACCATGCAAGCATTTCTTAAAGGTACA...GGGAAGCCGTGTCCGCCTTTTAAGATTGTGATTCTGGATGAAGCAGATTCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR GCA 90 bp | AACTGCTGCATCACAGTTGCACAAAGGCTGATGAGTTGCAAATGTTCATCAGCACAAAGGCTGATGAGTTaGAAATGTTCATCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: NCCITVAQRLMSCKCSSAQRLMS*KCSSAP Trigger: TGGTGCTGATGAACATTTGCAACTCATCAGCCTTTG...TGCTGATGAACATTTGCAACTCATCAGCCTTTGTGCAACTGTGATGCAGCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417876.1 |
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| CDS-3UTR CCA 90 bp | TTGAGCAAAATTTTTCACTTTCTCTCGAACTACTTGTATTCCACGTTCATCAGACCCAGGGAACGGGTTTaGCTTTCTTGTTCTCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: LSKIFHFLSNYLYSTFIRPRERV*LSCSLR Trigger: GCGGAGAGAACAAGAAAGCCAAACCCGTTCCCTGGG...TCTGATGAACGTGGAATACAAGTAGTTCGAGAGAAAGTGAAAAATTTTGCTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR CCA 90 bp | TGCATCACAGTTGCACAAAGGCTGATGAGTTGCAAATGTTCATCAGCACCATCTATCAATTTTCTCAGCTaGTATTACCCCGGCAATGTC | + |
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Preference number: 4 (lower is better) Translates to: CITVAQRLMSCKCSSAPSINFLS*YYPGNV Trigger: GACATTGCCGGGGTAATACCAGCTGAGAAAATTGAT...AGATGGTGCTGATGAACATTTGCAACTCATCAGCCTTTGTGCAACTGTGATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417876.1 |
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| CDS-3UTR TCA 90 bp | AATTATTCGACTGACATAGTTACAGATAAGACAGAATCGGGTGGTTTTCGACTCCTTGAAGCGGAATTTTaGACATCTAGAGGTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: NYSTDIVTDKTESGGFRLLEAEF*TSRGQG Trigger: CCCCTGACCTCTAGATGTTCAAAATTCCGCTTCAAG...GAGTCGAAAACCACCCGATTCTGTCTTATCTGTAACTATGTCAGTCGAATAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR TCA 90 bp | TGCTGCATCACAGTTGCACAAAGGCTGATGAGTTGCAAATGTTCATCAGCACCACATCTATTAAATCCTTaGCCACAGCTTCTAGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: CCITVAQRLMSCKCSSAPHLLNP*PQLLVC Trigger: ACAAACTAGAAGCTGTGGTCAAGGATTTAATAGATG...TGGTGCTGATGAACATTTGCAACTCATCAGCCTTTGTGCAACTGTGATGCAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417876.1 |
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| CDS-3UTR GCA 90 bp | GACATAGTTACAGATAAGACAGAATCGGGTGGTTTTCGACTCCTTCTCCATGGTGAGTTCTCTAGCTGCTaGCAAAATAGTGGATGTTTT | + |
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Preference number: 4 (lower is better) Translates to: DIVTDKTESGGFRLLLHGEFSSC*QNSGCF Trigger: AAAACATCCACTATTTTGGCAGCAGCTAGAGAACTC...ACCATGGAGAAGGAGTCGAAAACCACCCGATTCTGTCTTATCTGTAACTATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR TCA 90 bp | AACTGCTGCATCACAGTTGCACAAAGGCTGATGAGTTGCAAATGTTCATCAGCAAATCGAGTAGCGCTTTaGAGAAATGTAATGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: NCCITVAQRLMSCKCSSANRVAL*RNVMAF Trigger: AAAAGCCATTACATTTCTTCAAAGCGCTACTCGATT...TGCTGATGAACATTTGCAACTCATCAGCCTTTGTGCAACTGTGATGCAGCAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417876.1 |
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| CDS-3UTR CCA 90 bp | TCTCTCGAACTACTTGTATTCCACGTTCATCAGATGCATTTAACTCAAGAACTCACAAAAAGGACGAGATaGTCTCGAAGTCTTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SLELLVFHVHQMHLTQELTKRTR*SRSLSS Trigger: GGAGCTAAGACTTCGAGACCATCTCGTCCTTTTTGT...GAGTTCTTGAGTTAAATGCATCTGATGAACGTGGAATACAAGTAGTTCGAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR TCA 90 bp | AGATATATTCACGTTAACAATTCTGAGATAACTGCTGCATCACAGTTGCACAAATCAAAAGAGCCACTCTaGCAGGCAGCAAATACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RYIHVNNSEITAASQLHKSKEPL*QAANTP Trigger: TGGAGTATTTGCTGCCTGTCAGAGTGGCTCTTTTGA...TTTGTGCAACTGTGATGCAGCAGTTATCTCAGAATTGTTAACGTGAATATATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417876.1 |
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| CDS-3UTR TCA 90 bp | AGATATATTCACGTTAACAATTCTGAGATAACTGCTGCATCACAGTTGCACAAACATCATGGAGTTGATTaGCGAGCTGAGTTGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: RYIHVNNSEITAASQLHKHHGVD*RAELLH Trigger: ATGCAGCAACTCAGCTCGTCAATCAACTCCATGATG...TTTGTGCAACTGTGATGCAGCAGTTATCTCAGAATTGTTAACGTGAATATATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417876.1 |
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| CDS-3UTR TCA 90 bp | CTTGTATTCCACGTTCATCAGATGCATTTAACTCAAGAACTCTTAATCGGAAAATATCTGACAGAGGCTTaGAGCGGAATTTTGAACATC | + |
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Preference number: 4 (lower is better) Translates to: LVFHVHQMHLTQELLIGKYLTEA*SGILNI Trigger: GATGTTCAAAATTCCGCTTCAAGCCTCTGTCAGATA...TTTTCCGATTAAGAGTTCTTGAGTTAAATGCATCTGATGAACGTGGAATACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS GCA 90 bp | GAAGGTCCCGAGCCCGCTATCTTCGTAGGTGCGGGCCTCCGGAGGTaGAGGTCCCTGTCCTCCTTGTCCTGCTTCGTCGCAGAGCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: EGPEPAIFVGAGLRR*RSLSSLSCFVAEQN Trigger: GTTCTGCTCTGCGACGAAGCAGGACAAGGAGGACAGGGACCTGCACCTCCGGAGGCCCGCACCTACGAAGATAGCGGGCTCGGGACCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411792.1 |
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| CDS GCA 90 bp | AATACGCCGGTAGGAATACGCGGGCACGTAACGCGTCACTTCCGGTaGTGGGGCGCGCTGCTTGCGGAGGGAGTTTGCCCGTATACGGTT | + |
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Preference number: 5 (lower is better) Translates to: NTPVGIRGHVTRHFR*WGALLAEGVCPYTV Trigger: AACCGTATACGGGCAAACTCCCTCCGCAAGCAGCGCGCCCCAGCACCGGAAGTGACGCGTTACGTGCCCGCGTATTCCTACCGGCGTATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392481.6 |
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| CDS CCA 90 bp | ACGCCGGTAGGAATACGCGGGCACGTAACGCGTCACTTCCGGTGCTaGGGCGCGCTGCTTGCGGAGGGAGTTTGCCCGTATACGGTTTTA | + |
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Preference number: 5 (lower is better) Translates to: TPVGIRGHVTRHFRC*GALLAEGVCPYTVL Trigger: TAAAACCGTATACGGGCAAACTCCCTCCGCAAGCAGCGCGCCCCAGCACCGGAAGTGACGCGTTACGTGCCCGCGTATTCCTACCGGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392481.6 |
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| CDS GCA 90 bp | ACGCGTCACTTCCGGTGCTGGGGCGCGCTGCTTGCGGAGGGAGTTTaGCCGTATACGGTTTTATTTAGGCAGGTGATGAGCCAGCCGGAC | + |
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Preference number: 5 (lower is better) Translates to: TRHFRCWGALLAEGV*PYTVLFRQVMSQPD Trigger: GTCCGGCTGGCTCATCACCTGCCTAAATAAAACCGTATACGGGCAAACTCCCTCCGCAAGCAGCGCGCCCCAGCACCGGAAGTGACGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392481.6 |
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| CDS CCA 90 bp | GATGAGCCAGCCGGACTTTCAGGCAGAACTGGACTGGAACAGGCATaGCCTAGGAGGTGTCCCTGTCCCGGTGCATTGCTCCCACTTCAG | + |
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Preference number: 5 (lower is better) Translates to: DEPAGLSGRTGLEQA*PRRCPCPGALLPLQ Trigger: CTGAAGTGGGAGCAATGCACCGGGACAGGGACACCTCCTAGGCCATGCCTGTTCCAGTCCAGTTCTGCCTGAAAGTCCGGCTGGCTCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392481.6 |
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| CDS CCA 90 bp | TTTAGGCAGGTGATGAGCCAGCCGGACTTTCAGGCAGAACTGGACTaGAACAGGCATGGCCTAGGAGGTGTCCCTGTCCCGGTGCATTGC | + |
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Preference number: 5 (lower is better) Translates to: FRQVMSQPDFQAELD*NRHGLGGVPVPVHC Trigger: GCAATGCACCGGGACAGGGACACCTCCTAGGCCATGCCTGTTCCAGTCCAGTTCTGCCTGAAAGTCCGGCTGGCTCATCACCTGCCTAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392481.6 |
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| CDS CCA 90 bp | CATCCACACATTTTGGGCGATATTTTTCCACCCAGGGAACGGGTTTaGCTTTCTTGTTCTCTCCGCTACTTCCCGCACTGGCAGCTACTC | + |
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Preference number: 5 (lower is better) Translates to: HPHILGDIFPPRERV*LSCSLRYFPHWQLL Trigger: GAGTAGCTGCCAGTGCGGGAAGTAGCGGAGAGAACAAGAAAGCCAAACCCGTTCCCTGGGTGGAAAAATATCGCCCAAAATGTGTGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000296273.7 ENST00000392481.6 ENST00000418288.5 ENST00000427785.5 ENST00000433496.5 ENST00000448497.1 ENST00000449502.5 ENST00000494047.5 |
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| CDS-3UTR CAA 90 bp | AGACAGAATCGGGTGGTTTTCGACTCCTTCTCCATGGTACGTCTTAAAGCTGCCACCCAGGGAACGGGTTaGGCTTTCTTGTTCTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: RQNRVVFDSFSMVRLKAATQGTG*AFLFSP Trigger: CGGAGAGAACAAGAAAGCCAAACCCGTTCCCTGGGT...GGCAGCTTTAAGACGTACCATGGAGAAGGAGTCGAAAACCACCCGATTCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR CAA 90 bp | CATAGAATCTGCTTCATCCAGAATCACAATCTTAAAAGGCGGACACGGCTTCCCGCTACTCCTCGATCCTaGGTCAGCGGGGGTTTAGTA | + |
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Preference number: 5 (lower is better) Translates to: HRICFIQNHNLKRRTRLPATPRS*VSGGLV Trigger: TACTAAACCCCCGCTGACCAAGGATCGAGGAGTAGC...GGGAAGCCGTGTCCGCCTTTTAAGATTGTGATTCTGGATGAAGCAGATTCTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS GCA 90 bp | AACGCGTGTGCTTTAAGGGCAGAGACATCTGAAGATGCTTTGCCTTaGCCTCTTGAGGACACGTGGCTTTTACTTCTAATAGTGTCTGCG | + |
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Preference number: 5 (lower is better) Translates to: NACALRAETSEDALP*PLEDTWLLLLIVSA Trigger: CGCAGACACTATTAGAAGTAAAAGCCACGTGTCCTCAAGAGGGCAAGGCAAAGCATCTTCAGATGTCTCTGCCCTTAAAGCACACGCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411792.1 |
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| CDS-3UTR CAA 90 bp | GACATAGTTACAGATAAGACAGAATCGGGTGGTTTTCGACTCCTTCTCCATGGTCTTCATCCACACATTTaGGGCGATATTTTTCCACCC | + |
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Preference number: 5 (lower is better) Translates to: DIVTDKTESGGFRLLLHGLHPHI*GDIFPP Trigger: GGGTGGAAAAATATCGCCCAAAATGTGTGGATGAAG...ACCATGGAGAAGGAGTCGAAAACCACCCGATTCTGTCTTATCTGTAACTATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR CAA 90 bp | AACTGCTGCATCACAGTTGCACAAAGGCTGATGAGTTGCAAATGTTCATCAGCACCATCTGCTAGGCATTaGTCAAGGCAAGTTTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: NCCITVAQRLMSCKCSSAPSARH*SRQVFL Trigger: CAGAAAAACTTGCCTTGACAAATGCCTAGCAGATGG...TGCTGATGAACATTTGCAACTCATCAGCCTTTGTGCAACTGTGATGCAGCAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417876.1 |
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| CDS TCA 90 bp | GACTTTACCTTGACCACAGCTTCTAGTTTGTCAAAAGAGCCACTCTaGCAGGCAGCAAATACTCCATCAATTTTCTCAGCTGGTATTACC | + |
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Preference number: 5 (lower is better) Translates to: DFTLTTASSLSKEPL*QAANTPSIFSAGIT Trigger: GGTAATACCAGCTGAGAAAATTGATGGAGTATTTGCTGCCTGTCAGAGTGGCTCTTTTGACAAACTAGAAGCTGTGGTCAAGGTAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479307.5 |
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| CDS TCA 90 bp | ATTAAATCCTTGACCACAGCTTCTAGTTTGTCAAAAGAGCCACTCTaGCAGGCAGCAAATACTCCATCAATTTTCTCAGCTGGTATTACC | + |
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Preference number: 5 (lower is better) Translates to: IKSLTTASSLSKEPL*QAANTPSIFSAGIT Trigger: GGTAATACCAGCTGAGAAAATTGATGGAGTATTTGCTGCCTGTCAGAGTGGCTCTTTTGACAAACTAGAAGCTGTGGTCAAGGATTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000296273.7 ENST00000392481.6 ENST00000417876.1 |
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| CDS TCA 90 bp | GTTTATCAGATAAGTTATTTTCTACAACCACATCATGGAGTTGATTaGCGAGCTGAGTTGCTGCATGACCCTCATCTATTAAATCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: VYQISYFLQPHHGVD*RAELLHDPHLLNPR Trigger: CCGGGGATTTAATAGATGAGGGTCATGCAGCAACTCAGCTCGTCAATCAACTCCATGATGTGGTTGTAGAAAATAACTTATCTGATAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433496.5 |
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| CDS-3UTR CAA 90 bp | TCCAGATATATTCACGTTAACAATTCTGAGATAACTGCTGCATCACAGTTGCACACAAAGGCTGATGAGTaGCAAATGTTCATCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: SRYIHVNNSEITAASQLHTKADE*QMFIST Trigger: GGTGCTGATGAACATTTGCAACTCATCAGCCTTTGT...GTGCAACTGTGATGCAGCAGTTATCTCAGAATTGTTAACGTGAATATATCTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417876.1 |
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| CDS-3UTR CAA 90 bp | AGATATATTCACGTTAACAATTCTGAGATAACTGCTGCATCACAGTTGCACAAAAACCACATCATGGAGTaGATTGACGAGCTGAGTTGC | + |
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Preference number: 5 (lower is better) Translates to: RYIHVNNSEITAASQLHKNHIME*IDELSC Trigger: GCAACTCAGCTCGTCAATCAACTCCATGATGTGGTT...TTTGTGCAACTGTGATGCAGCAGTTATCTCAGAATTGTTAACGTGAATATATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417876.1 |
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| CDS-3UTR CAA 90 bp | TCCCATCTGAGCGACTTCCTGACACAGTTAATTGAGCAAAATTTTTCACTTTCTTTTCTCTCGAACTACTaGTATTCCACGTTCATCAGA | + |
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Preference number: 5 (lower is better) Translates to: SHLSDFLTQLIEQNFSLSFLSNY*YSTFIR Trigger: TCTGATGAACGTGGAATACAAGTAGTTCGAGAGAAA...AGAAAGTGAAAAATTTTGCTCAATTAACTGTGTCAGGAAGTCGCTCAGATGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR CAA 90 bp | TCCCATCTGAGCGACTTCCTGACACAGTTAATTGAGCAAAATTTTTCACTTTCTTTATCTGACAGAGGCTaGAAGCGGAATTTTGAACAT | + |
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Preference number: 5 (lower is better) Translates to: SHLSDFLTQLIEQNFSLSLSDRG*KRNFEH Trigger: ATGTTCAAAATTCCGCTTCAAGCCTCTGTCAGATAA...AGAAAGTGAAAAATTTTGCTCAATTAACTGTGTCAGGAAGTCGCTCAGATGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS-3UTR CAA 90 bp | GAACTACTTGTATTCCACGTTCATCAGATGCATTTAACTCAAGAACTCTTAATCACCTTTAAGAAATGCTaGCATGGTACTTCACCCAGT | + |
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Preference number: 5 (lower is better) Translates to: ELLVFHVHQMHLTQELLITFKKC*HGTSPS Trigger: ACTGGGTGAAGTACCATGCAAGCATTTCTTAAAGGT...GATTAAGAGTTCTTGAGTTAAATGCATCTGATGAACGTGGAATACAAGTAGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449502.5 |
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| CDS TCA 90 bp | GTTTATCAGATAAGTTATTTTCTACAACCACATCATGGAGTTGATTaGCGAGCTGAGTTGCTGCATGACCCTCATCTATTAAATCCTATA | + |
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Preference number: 5 (lower is better) Translates to: VYQISYFLQPHHGVD*RAELLHDPHLLNPI Trigger: TATAGGATTTAATAGATGAGGGTCATGCAGCAACTCAGCTCGTCAATCAACTCCATGATGTGGTTGTAGAAAATAACTTATCTGATAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479307.5 |
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| CDS-3UTR CAA 90 bp | AGATATATTCACGTTAACAATTCTGAGATAACTGCTGCATCACAGTTGCACAAATCATCTATTAAATCCTaGACCACAGCTTCTAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: RYIHVNNSEITAASQLHKSSIKS*TTASSL Trigger: CAAACTAGAAGCTGTGGTCAAGGATTTAATAGATGA...TTTGTGCAACTGTGATGCAGCAGTTATCTCAGAATTGTTAACGTGAATATATCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417876.1 |
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| CDS GCA 72 bp | GTAGGAATACGCGGGCACGTAACGCGTCACTTCCGGTaGTGGGGCGCGCTGCTTGCGGAGGGAGTTTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: VGIRGHVTRHFR*WGALLAEGVCP Trigger: CGGGCAAACTCCCTCCGCAAGCAGCGCGCCCCAGCACCGGAAGTGACGCGTTACGTGCCCGCGTATTCCTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392481.6 |
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| CDS GCA 72 bp | GTCCACCGAAGGTCCCGAGCCCGCTATCTTCGTAGGTaGGGGCCTCCGGAGGTGCAGGTCCCTGTCCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: VHRRSRARYLRR*GPPEVQVPVLL Trigger: AAGGAGGACAGGGACCTGCACCTCCGGAGGCCCGCACCTACGAAGATAGCGGGCTCGGGACCTTCGGTGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411792.1 |
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| CDS CCA 72 bp | GGAATACGCGGGCACGTAACGCGTCACTTCCGGTGCTaGGGCGCGCTGCTTGCGGAGGGAGTTTGCCCGTAT | + |
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Preference number: 6 (lower is better) Translates to: GIRGHVTRHFRC*GALLAEGVCPY Trigger: ATACGGGCAAACTCCCTCCGCAAGCAGCGCGCCCCAGCACCGGAAGTGACGCGTTACGTGCCCGCGTATTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392481.6 |
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| CDS CAA 90 bp | ATCTTCGTAGGTGCGGGCCTCCGGAGGTGCAGGTCCCTGTCCTCCTaGTCCTGCTTCGTCGCAGAGCAGAACGCGTGTGCTTTAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: IFVGAGLRRCRSLSS*SCFVAEQNACALRA Trigger: TGCCCTTAAAGCACACGCGTTCTGCTCTGCGACGAAGCAGGACAAGGAGGACAGGGACCTGCACCTCCGGAGGCCCGCACCTACGAAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411792.1 |
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| CDS CCA 72 bp | GCCGGACTTTCAGGCAGAACTGGACTGGAACAGGCATaGCCTAGGAGGTGTCCCTGTCCCGGTGCATTGCTC | + |
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Preference number: 6 (lower is better) Translates to: AGLSGRTGLEQA*PRRCPCPGALL Trigger: GAGCAATGCACCGGGACAGGGACACCTCCTAGGCCATGCCTGTTCCAGTCCAGTTCTGCCTGAAAGTCCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392481.6 |
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| CDS CCA 72 bp | GTGATGAGCCAGCCGGACTTTCAGGCAGAACTGGACTaGAACAGGCATGGCCTAGGAGGTGTCCCTGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: VMSQPDFQAELD*NRHGLGGVPVP Trigger: CGGGACAGGGACACCTCCTAGGCCATGCCTGTTCCAGTCCAGTTCTGCCTGAAAGTCCGGCTGGCTCATCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392481.6 |
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| CDS GCA 72 bp | TTCCGGTGCTGGGGCGCGCTGCTTGCGGAGGGAGTTTaGCCGTATACGGTTTTATTTAGGCAGGTGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: FRCWGALLAEGV*PYTVLFRQVMS Trigger: GCTCATCACCTGCCTAAATAAAACCGTATACGGGCAAACTCCCTCCGCAAGCAGCGCGCCCCAGCACCGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392481.6 |
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| CDS CCA 72 bp | GTTTGGCTTTCTTGTTCTCTCCGCTACTTCCCGCACTaGCAGCTACTCCTCGATCCTTGGTCAGCGGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: VWLSCSLRYFPH*QLLLDPWSAGV Trigger: AACCCCCGCTGACCAAGGATCGAGGAGTAGCTGCCAGTGCGGGAAGTAGCGGAGAGAACAAGAAAGCCAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000296273.7 ENST00000392481.6 ENST00000411792.1 ENST00000418288.5 ENST00000427785.5 ENST00000433496.5 ENST00000448497.1 ENST00000449502.5 ENST00000494047.5 |
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| CDS CAA 72 bp | CCGCTACTTCCCGCACTGGCAGCTACTCCTCGATCCTaGGTCAGCGGGGGTTTAGTACTGATGGATGTACCT | + |
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Preference number: 6 (lower is better) Translates to: PLLPALAATPRS*VSGGLVLMDVP Trigger: AGGTACATCCATCAGTACTAAACCCCCGCTGACCAAGGATCGAGGAGTAGCTGCCAGTGCGGGAAGTAGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000296273.7 ENST00000392481.6 ENST00000411792.1 ENST00000418288.5 ENST00000427785.5 ENST00000433496.5 ENST00000448497.1 ENST00000449502.5 ENST00000494047.5 |
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| CDS CAA 90 bp | TCATCCACACATTTTGGGCGATATTTTTCCACCCAGGGAACGGGTTaGGCTTTCTTGTTCTCTCCGCTACTTCCCGCACTGGCAGCTACT | + |
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Preference number: 6 (lower is better) Translates to: SSTHFGRYFSTQGTG*AFLFSPLLPALAAT Trigger: AGTAGCTGCCAGTGCGGGAAGTAGCGGAGAGAACAAGAAAGCCAAACCCGTTCCCTGGGTGGAAAAATATCGCCCAAAATGTGTGGATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000296273.7 ENST00000392481.6 ENST00000418288.5 ENST00000427785.5 ENST00000433496.5 ENST00000448497.1 ENST00000449502.5 ENST00000494047.5 |
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| CDS CAA 72 bp | CATTTTGGGCGATATTTTTCCACCCAGGGAACGGGTTaGGCTTTCTTGTTCTCTCCGCTACTTCCCGCACTG | + |
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Preference number: 6 (lower is better) Translates to: HFGRYFSTQGTG*AFLFSPLLPAL Trigger: CAGTGCGGGAAGTAGCGGAGAGAACAAGAAAGCCAAACCCGTTCCCTGGGTGGAAAAATATCGCCCAAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000296273.7 ENST00000392481.6 ENST00000418288.5 ENST00000427785.5 ENST00000433496.5 ENST00000448497.1 ENST00000449502.5 ENST00000494047.5 |
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| CDS CAA 72 bp | CCACTTCTTCCTGGAAAGCAACTTCATCCACACATTTaGGGCGACTTGCGGGGTGAGAAGGAGGAAAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: PLLPGKQLHPHI*GDLRGEKEERG Trigger: ACCTCTTTCCTCCTTCTCACCCCGCAAGTCGCCCAAAATGTGTGGATGAAGTTGCTTTCCAGGAAGAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489028.1 |
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| CDS CAA 90 bp | TTGTTCTCTCCGCTACTTCCCGCACTGGCAGCTACTCCTCGATCCTaGGTCAGCGGGGGTTTAGTACTGATGGATGTACCTTTAAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: LFSPLLPALAATPRS*VSGGLVLMDVPLRN Trigger: ATTTCTTAAAGGTACATCCATCAGTACTAAACCCCCGCTGACCAAGGATCGAGGAGTAGCTGCCAGTGCGGGAAGTAGCGGAGAGAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000296273.7 ENST00000392481.6 ENST00000411792.1 ENST00000418288.5 ENST00000427785.5 ENST00000433496.5 ENST00000448497.1 ENST00000449502.5 ENST00000494047.5 |
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| CDS CCA 72 bp | TTATTGCGAATCAGCACCATAGGAAAGCGGGGGTGGTaGTGGGGAACCATTATGAGAAAGTACAGCCCGAAA | + |
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Preference number: 6 (lower is better) Translates to: LLRISTIGKRGW*WGTIMRKYSPK Trigger: TTTCGGGCTGTACTTTCTCATAATGGTTCCCCACCACCACCCCCGCTTTCCTATGGTGCTGATTCGCAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448497.1 |
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| CDS CCA 72 bp | CACTTCTTCCTGGAAAGCAACTTCATCCACACATTTTaGGCGACTTGCGGGGTGAGAAGGAGGAAAGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: HFFLESNFIHTF*ATCGVRRRKEV Trigger: AACCTCTTTCCTCCTTCTCACCCCGCAAGTCGCCCAAAATGTGTGGATGAAGTTGCTTTCCAGGAAGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489028.1 |
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| CDS CAA 90 bp | GAGCAGAACGCGTGTGCTTTAAGGGCAGAGACATCTGAAGATGCTTaGCCTTGCCCTCTTGAGGACACGTGGCTTTTACTTCTAATAGTG | + |
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Preference number: 6 (lower is better) Translates to: EQNACALRAETSEDA*PCPLEDTWLLLLIV Trigger: CACTATTAGAAGTAAAAGCCACGTGTCCTCAAGAGGGCAAGGCAAAGCATCTTCAGATGTCTCTGCCCTTAAAGCACACGCGTTCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411792.1 |
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| CDS CAA 72 bp | GGACACGTGGCTTTTACTTCTAATAGTGTCTGCGTGTaGTGGAGAGAGAAGACCATGCAGCTGTGGACATCT | + |
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Preference number: 6 (lower is better) Translates to: GHVAFTSNSVCV*WREKTMQLWTS Trigger: AGATGTCCACAGCTGCATGGTCTTCTCTCTCCACAACACGCAGACACTATTAGAAGTAAAAGCCACGTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411792.1 |
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| CDS CAA 90 bp | GCACTGCAACCACTTCTTCCTGGAAAGCAACTTCATCCACACATTTaGGGCGACTTGCGGGGTGAGAAGGAGGAAAGAGGTTATTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: ALQPLLPGKQLHPHI*GDLRGEKEERGYLV Trigger: TACTAAATAACCTCTTTCCTCCTTCTCACCCCGCAAGTCGCCCAAAATGTGTGGATGAAGTTGCTTTCCAGGAAGAAGTGGTTGCAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489028.1 |
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| CDS GCA 72 bp | CGGGGGTTTAGTACTGATGGATGTACCTTTAAGAAATaGTTGCATGGTACTTCACCGATCACTGATGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: RGFSTDGCTFKK*LHGTSPITDVP Trigger: GGGGACATCAGTGATCGGTGAAGTACCATGCAAGCATTTCTTAAAGGTACATCCATCAGTACTAAACCCCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392481.6 ENST00000418288.5 |
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| CDS GCA 72 bp | CGGGGGTTTAGTACTGATGGATGTACCTTTAAGAAATaGTTGCATGGTACTTCACCCTGGTCAGGTGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: RGFSTDGCTFKK*LHGTSPWSGAR Trigger: TCTTGCACCTGACCAGGGTGAAGTACCATGCAAGCATTTCTTAAAGGTACATCCATCAGTACTAAACCCCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000448497.1 |
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| CDS CAA 72 bp | CCTGGAAAGCAACTTCATCCACACATTTTGGGCGACTaGCGGGGTGAGAAGGAGGAAAGAGGTTATTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: PGKQLHPHILGD*RGEKEERGYLV Trigger: TACTAAATAACCTCTTTCCTCCTTCTCACCCCGCAAGTCGCCCAAAATGTGTGGATGAAGTTGCTTTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489028.1 |
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| CDS GCA 72 bp | CGGGGGTTTAGTACTGATGGATGTACCTTTAAGAAATaGTTGCATGGTACTTCACCCTTCAGAGACTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RGFSTDGCTFKK*LHGTSPFRDFL Trigger: CAGAAAGTCTCTGAAGGGTGAAGTACCATGCAAGCATTTCTTAAAGGTACATCCATCAGTACTAAACCCCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427785.5 |
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| CDS CAA 90 bp | CCACTTCTTCCTGGAAAGCAACTTCATCCACACATTTTGGGCGACTaGCGGGGTGAGAAGGAGGAAAGAGGTTATTTAGTATATTATAGT | + |
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Preference number: 6 (lower is better) Translates to: PLLPGKQLHPHILGD*RGEKEERGYLVYYS Trigger: ACTATAATATACTAAATAACCTCTTTCCTCCTTCTCACCCCGCAAGTCGCCCAAAATGTGTGGATGAAGTTGCTTTCCAGGAAGAAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489028.1 |
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| CDS TCA 72 bp | TTGACCACAGCTTCTAGTTTGTCAAAAGAGCCACTCTaGCAGGCAGCAAATACTCCATCAATTTTCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LTTASSLSKEPL*QAANTPSIFSA Trigger: AGCTGAGAAAATTGATGGAGTATTTGCTGCCTGTCAGAGTGGCTCTTTTGACAAACTAGAAGCTGTGGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000296273.7 ENST00000392481.6 ENST00000417876.1 ENST00000479307.5 |
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| CDS GCA 72 bp | AATGTCTGTTACATGCCTGACAAACTGAAAAGTCAGTaGTATCTCCTCACCTCAAACACTCTGATACTCCCA | + |
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Preference number: 6 (lower is better) Translates to: NVCYMPDKLKSQ*YLLTSNTLILP Trigger: TGGGAGTATCAGAGTGTTTGAGGTGAGGAGATAGCACTGACTTTTCAGTTTGTCAGGCATGTAACAGACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494047.5 |
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| CDS TCA 72 bp | GTGATCTCCTTTCCACCTGTTAATCGAGTAGCGCTTTaGAGAAATGTAATGGCTTTTCTTAAGTCTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VISFPPVNRVAL*RNVMAFLKSPS Trigger: AGAAGGAGACTTAAGAAAAGCCATTACATTTCTTCAAAGCGCTACTCGATTAACAGGTGGAAAGGAGATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000296273.7 ENST00000392481.6 ENST00000417876.1 ENST00000433496.5 ENST00000460408.5 ENST00000479307.5 ENST00000494047.5 |
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| CDS TCA 72 bp | ATAAGTTATTTTCTACAACCACATCATGGAGTTGATTaGCGAGCTGAGTTGCTGCATGACCCTCATCTATTA | + |
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Preference number: 6 (lower is better) Translates to: ISYFLQPHHGVD*RAELLHDPHLL Trigger: TAATAGATGAGGGTCATGCAGCAACTCAGCTCGTCAATCAACTCCATGATGTGGTTGTAGAAAATAACTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000296273.7 ENST00000392481.6 ENST00000417876.1 ENST00000433496.5 ENST00000479307.5 |
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